Query psy6856
Match_columns 370
No_of_seqs 321 out of 2553
Neff 8.9
Searched_HMMs 46136
Date Fri Aug 16 20:08:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6856.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6856hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2624|consensus 100.0 1.2E-45 2.7E-50 349.5 15.2 295 68-367 29-357 (403)
2 PLN02872 triacylglycerol lipas 100.0 2.1E-40 4.5E-45 318.2 15.2 283 76-369 33-352 (395)
3 TIGR02240 PHA_depoly_arom poly 99.8 1.7E-18 3.8E-23 159.9 15.8 106 95-202 9-122 (276)
4 PLN02824 hydrolase, alpha/beta 99.8 1E-18 2.3E-23 162.8 13.0 105 94-202 14-133 (294)
5 KOG4178|consensus 99.8 1.8E-18 3.9E-23 157.4 12.2 117 88-207 22-149 (322)
6 PRK03592 haloalkane dehalogena 99.8 6.3E-18 1.4E-22 157.7 14.8 104 94-202 13-124 (295)
7 PRK00870 haloalkane dehalogena 99.8 5.6E-18 1.2E-22 158.6 14.3 117 85-202 17-146 (302)
8 PLN02578 hydrolase 99.7 1.9E-16 4.1E-21 151.7 17.0 107 91-202 69-183 (354)
9 PLN02679 hydrolase, alpha/beta 99.7 8.3E-17 1.8E-21 154.5 13.7 91 111-202 87-187 (360)
10 PRK03204 haloalkane dehalogena 99.7 7.1E-17 1.5E-21 150.1 12.6 116 81-202 8-132 (286)
11 PHA02857 monoglyceride lipase; 99.7 1.2E-16 2.7E-21 147.4 13.2 111 91-202 4-128 (276)
12 PRK10673 acyl-CoA esterase; Pr 99.7 1E-16 2.3E-21 145.7 11.9 93 109-202 13-112 (255)
13 TIGR03343 biphenyl_bphD 2-hydr 99.7 4.9E-16 1.1E-20 143.5 16.3 108 92-202 11-132 (282)
14 TIGR03056 bchO_mg_che_rel puta 99.7 1.3E-16 2.8E-21 146.6 12.3 107 93-202 11-126 (278)
15 KOG4391|consensus 99.7 1E-16 2.2E-21 136.4 7.8 149 48-200 17-178 (300)
16 PLN03087 BODYGUARD 1 domain co 99.7 5.7E-16 1.2E-20 152.1 14.3 109 93-202 181-305 (481)
17 PLN02385 hydrolase; alpha/beta 99.7 6.1E-16 1.3E-20 147.9 13.8 119 83-202 57-193 (349)
18 PRK10349 carboxylesterase BioH 99.7 7.2E-16 1.6E-20 140.7 13.5 87 113-202 14-105 (256)
19 KOG1454|consensus 99.7 1.1E-15 2.4E-20 143.8 14.6 101 110-211 56-168 (326)
20 KOG4409|consensus 99.7 9.3E-16 2E-20 140.2 13.1 131 80-214 58-200 (365)
21 TIGR03611 RutD pyrimidine util 99.7 8.5E-16 1.9E-20 138.8 11.7 92 110-202 11-111 (257)
22 PLN02298 hydrolase, alpha/beta 99.6 1.2E-15 2.7E-20 144.6 12.9 125 77-202 22-165 (330)
23 PRK06489 hypothetical protein; 99.6 6.6E-16 1.4E-20 148.3 10.9 91 112-202 69-185 (360)
24 PLN02965 Probable pheophorbida 99.6 6E-16 1.3E-20 141.3 9.7 89 114-203 5-104 (255)
25 PLN03084 alpha/beta hydrolase 99.6 4.5E-15 9.8E-20 142.7 15.6 117 83-202 100-228 (383)
26 PRK10749 lysophospholipase L2; 99.6 1.4E-15 3E-20 144.3 11.3 113 87-201 30-161 (330)
27 TIGR02427 protocat_pcaD 3-oxoa 99.6 1.9E-15 4.2E-20 135.4 10.7 91 111-202 12-110 (251)
28 TIGR01738 bioH putative pimelo 99.6 4.4E-15 9.5E-20 132.7 12.1 89 112-202 4-96 (245)
29 PRK14875 acetoin dehydrogenase 99.6 2.9E-15 6.3E-20 144.0 11.4 98 103-201 122-227 (371)
30 PRK13604 luxD acyl transferase 99.6 4.2E-15 9E-20 136.8 11.2 119 85-210 7-142 (307)
31 PRK07581 hypothetical protein; 99.6 1.3E-14 2.8E-19 138.2 14.2 92 111-203 40-156 (339)
32 PLN02211 methyl indole-3-aceta 99.6 5.9E-15 1.3E-19 136.2 10.9 92 110-202 16-118 (273)
33 PRK00175 metX homoserine O-ace 99.6 3.4E-15 7.4E-20 144.2 9.2 109 93-202 23-178 (379)
34 TIGR01392 homoserO_Ac_trn homo 99.6 9.9E-15 2.2E-19 139.6 10.6 107 95-202 13-158 (351)
35 COG2267 PldB Lysophospholipase 99.6 1.7E-14 3.7E-19 134.3 10.7 121 88-212 10-145 (298)
36 TIGR01249 pro_imino_pep_1 prol 99.6 2.7E-14 5.9E-19 134.0 12.0 111 88-202 5-126 (306)
37 TIGR01250 pro_imino_pep_2 prol 99.6 4.5E-14 9.8E-19 129.4 13.0 109 93-202 7-127 (288)
38 PRK08775 homoserine O-acetyltr 99.5 3.6E-14 7.7E-19 135.4 12.2 103 96-202 44-169 (343)
39 PRK05077 frsA fermentation/res 99.5 2.5E-13 5.4E-18 132.4 18.3 122 79-201 160-295 (414)
40 PLN02652 hydrolase; alpha/beta 99.5 6.6E-14 1.4E-18 135.4 14.1 122 87-210 110-246 (395)
41 PRK11126 2-succinyl-6-hydroxy- 99.5 1.6E-14 3.4E-19 130.4 8.9 88 112-201 2-97 (242)
42 KOG1455|consensus 99.5 2.1E-14 4.6E-19 129.0 9.4 129 79-211 19-166 (313)
43 PLN02511 hydrolase 99.5 5E-14 1.1E-18 136.4 12.3 111 85-195 69-197 (388)
44 PRK10985 putative hydrolase; P 99.5 2.8E-14 6.1E-19 135.0 9.4 108 86-194 30-154 (324)
45 PLN02894 hydrolase, alpha/beta 99.5 1.1E-13 2.4E-18 134.6 12.6 108 92-201 84-206 (402)
46 COG1647 Esterase/lipase [Gener 99.5 1.3E-14 2.8E-19 124.4 4.5 89 111-202 14-114 (243)
47 TIGR03695 menH_SHCHC 2-succiny 99.5 1E-13 2.2E-18 123.9 9.9 89 112-201 1-100 (251)
48 PF04083 Abhydro_lipase: Parti 99.5 8.4E-14 1.8E-18 97.5 6.7 56 76-131 1-62 (63)
49 PF12697 Abhydrolase_6: Alpha/ 99.5 2E-14 4.4E-19 126.5 3.7 86 115-201 1-96 (228)
50 TIGR01836 PHA_synth_III_C poly 99.5 3.5E-13 7.5E-18 128.9 12.0 108 92-201 42-166 (350)
51 PRK05855 short chain dehydroge 99.5 4.4E-13 9.6E-18 136.4 13.4 108 90-201 5-123 (582)
52 PLN02980 2-oxoglutarate decarb 99.4 5.4E-13 1.2E-17 149.0 12.1 107 95-202 1353-1476(1655)
53 PRK11071 esterase YqiA; Provis 99.4 1.8E-12 3.9E-17 113.1 10.9 74 113-193 2-83 (190)
54 KOG1552|consensus 99.4 3.4E-12 7.3E-17 112.7 11.9 113 86-201 34-158 (258)
55 PRK06765 homoserine O-acetyltr 99.4 1.3E-12 2.8E-17 126.0 10.2 52 151-202 140-192 (389)
56 TIGR01838 PHA_synth_I poly(R)- 99.4 7.2E-12 1.6E-16 124.5 14.3 91 111-202 187-298 (532)
57 PRK10566 esterase; Provisional 99.3 2.8E-12 6.1E-17 116.4 8.6 94 101-195 14-131 (249)
58 TIGR01607 PST-A Plasmodium sub 99.3 5.5E-12 1.2E-16 119.7 9.2 117 92-210 2-186 (332)
59 PRK07868 acyl-CoA synthetase; 99.3 1.5E-11 3.3E-16 132.5 11.4 92 110-202 65-173 (994)
60 TIGR03101 hydr2_PEP hydrolase, 99.3 3.2E-11 7E-16 110.2 11.1 116 89-209 2-134 (266)
61 PF12695 Abhydrolase_5: Alpha/ 99.2 2.1E-11 4.7E-16 100.8 7.1 85 114-201 1-90 (145)
62 KOG1838|consensus 99.2 5.4E-11 1.2E-15 112.4 9.7 114 84-201 90-227 (409)
63 TIGR01840 esterase_phb esteras 99.2 3.7E-10 8E-15 100.2 13.5 97 104-201 4-125 (212)
64 KOG2984|consensus 99.2 1.5E-11 3.3E-16 104.0 3.5 101 97-202 30-145 (277)
65 KOG2382|consensus 99.2 1.4E-10 3.1E-15 106.0 9.4 202 110-315 50-303 (315)
66 PRK11460 putative hydrolase; P 99.1 2.6E-10 5.7E-15 102.6 9.4 90 109-199 13-131 (232)
67 TIGR01839 PHA_synth_II poly(R) 99.1 1.2E-09 2.6E-14 107.8 13.7 98 110-210 213-330 (560)
68 COG2021 MET2 Homoserine acetyl 99.1 5.3E-10 1.2E-14 103.8 9.2 49 154-202 129-178 (368)
69 PLN02442 S-formylglutathione h 99.0 1.4E-09 3.1E-14 100.9 11.3 91 111-201 46-173 (283)
70 COG0429 Predicted hydrolase of 99.0 4E-10 8.7E-15 103.0 7.2 106 87-193 49-170 (345)
71 COG0400 Predicted esterase [Ge 99.0 1.3E-09 2.9E-14 95.5 10.2 92 109-201 15-129 (207)
72 PF00561 Abhydrolase_1: alpha/ 99.0 1.5E-12 3.3E-17 115.6 -8.8 55 148-202 21-75 (230)
73 COG1506 DAP2 Dipeptidyl aminop 99.0 2.2E-09 4.8E-14 110.1 11.9 111 83-195 361-497 (620)
74 TIGR02821 fghA_ester_D S-formy 98.9 1.9E-08 4E-13 93.0 13.5 91 110-201 40-168 (275)
75 cd00707 Pancreat_lipase_like P 98.9 7.9E-10 1.7E-14 102.0 3.3 95 109-203 33-144 (275)
76 PRK10115 protease 2; Provision 98.9 1.9E-08 4E-13 104.1 13.1 118 84-201 413-554 (686)
77 PLN00021 chlorophyllase 98.9 4.8E-09 1E-13 98.4 7.8 105 105-210 45-167 (313)
78 TIGR03230 lipo_lipase lipoprot 98.9 4.8E-09 1E-13 101.7 7.3 98 109-207 38-155 (442)
79 PF07819 PGAP1: PGAP1-like pro 98.8 9.8E-09 2.1E-13 91.8 7.3 95 111-206 3-120 (225)
80 TIGR03100 hydr1_PEP hydrolase, 98.8 2.1E-08 4.5E-13 92.6 9.4 109 89-201 4-129 (274)
81 COG3243 PhaC Poly(3-hydroxyalk 98.8 2.1E-08 4.6E-13 94.4 9.0 99 111-211 106-220 (445)
82 PRK10162 acetyl esterase; Prov 98.8 1.2E-07 2.7E-12 89.4 14.3 103 86-192 56-175 (318)
83 PF06342 DUF1057: Alpha/beta h 98.8 1.2E-07 2.6E-12 85.3 13.0 118 89-212 8-140 (297)
84 PF02230 Abhydrolase_2: Phosph 98.8 4.8E-08 1E-12 86.9 10.6 93 109-201 11-135 (216)
85 KOG2564|consensus 98.8 5.6E-09 1.2E-13 92.9 4.4 102 88-191 51-166 (343)
86 PF06500 DUF1100: Alpha/beta h 98.8 5.4E-08 1.2E-12 92.8 11.3 127 78-208 156-295 (411)
87 COG0412 Dienelactone hydrolase 98.7 7.7E-08 1.7E-12 86.6 10.6 105 88-193 3-134 (236)
88 PF10503 Esterase_phd: Esteras 98.7 6.1E-07 1.3E-11 79.5 13.5 98 104-201 6-127 (220)
89 PF00326 Peptidase_S9: Prolyl 98.6 7.1E-08 1.5E-12 85.5 6.6 47 154-200 45-93 (213)
90 KOG4667|consensus 98.6 3.3E-07 7.1E-12 78.8 9.0 84 109-194 30-128 (269)
91 KOG2931|consensus 98.6 9.1E-07 2E-11 79.6 12.1 113 86-203 21-154 (326)
92 COG4757 Predicted alpha/beta h 98.6 7.8E-08 1.7E-12 83.5 5.0 102 90-193 8-126 (281)
93 PF05448 AXE1: Acetyl xylan es 98.6 1.2E-07 2.5E-12 89.2 6.5 114 84-199 53-202 (320)
94 COG0596 MhpC Predicted hydrola 98.5 4.8E-07 1E-11 80.3 9.7 90 112-202 21-119 (282)
95 PF01674 Lipase_2: Lipase (cla 98.5 3.5E-08 7.6E-13 87.3 1.8 76 113-191 2-95 (219)
96 COG3208 GrsT Predicted thioest 98.5 2.9E-06 6.2E-11 75.0 12.5 83 110-193 5-96 (244)
97 TIGR00976 /NonD putative hydro 98.5 4.6E-07 1E-11 91.9 8.8 109 92-201 1-127 (550)
98 COG3458 Acetyl esterase (deace 98.5 1.2E-06 2.6E-11 78.0 9.7 114 86-201 55-205 (321)
99 PF01738 DLH: Dienelactone hyd 98.5 6.4E-08 1.4E-12 86.2 1.8 88 104-192 6-119 (218)
100 PF11339 DUF3141: Protein of u 98.4 3.6E-06 7.8E-11 81.4 13.3 52 159-212 127-179 (581)
101 PF06821 Ser_hydrolase: Serine 98.4 7.3E-07 1.6E-11 76.2 7.1 86 115-208 1-90 (171)
102 PF03096 Ndr: Ndr family; Int 98.4 2.5E-07 5.4E-12 84.1 4.1 111 89-202 1-130 (283)
103 TIGR03502 lipase_Pla1_cef extr 98.3 9.2E-07 2E-11 91.3 7.3 102 89-191 419-575 (792)
104 PF10230 DUF2305: Uncharacteri 98.3 2.4E-06 5.2E-11 78.5 8.8 97 112-209 2-122 (266)
105 PF03959 FSH1: Serine hydrolas 98.2 1.9E-06 4.1E-11 76.5 5.7 81 111-192 3-123 (212)
106 TIGR01849 PHB_depoly_PhaZ poly 98.2 8.9E-06 1.9E-10 78.4 10.3 121 84-210 72-210 (406)
107 PF00975 Thioesterase: Thioest 98.2 6.4E-06 1.4E-10 73.6 8.8 88 113-201 1-99 (229)
108 PF05728 UPF0227: Uncharacteri 98.1 6.5E-06 1.4E-10 71.2 7.3 74 115-193 2-81 (187)
109 PF07224 Chlorophyllase: Chlor 98.1 5.4E-06 1.2E-10 73.6 6.3 102 109-212 43-160 (307)
110 PF02273 Acyl_transf_2: Acyl t 98.1 6.6E-05 1.4E-09 66.2 12.0 102 88-191 3-121 (294)
111 PF08538 DUF1749: Protein of u 98.0 7.4E-06 1.6E-10 75.2 5.6 103 111-214 32-153 (303)
112 PF06028 DUF915: Alpha/beta hy 98.0 1.8E-06 3.9E-11 78.3 1.2 83 110-193 9-125 (255)
113 PF05057 DUF676: Putative seri 98.0 5.5E-06 1.2E-10 73.8 4.1 79 111-190 3-97 (217)
114 PF12715 Abhydrolase_7: Abhydr 98.0 7E-06 1.5E-10 77.4 4.2 113 80-193 81-248 (390)
115 COG3571 Predicted hydrolase of 98.0 4.3E-05 9.3E-10 62.9 8.2 89 112-201 14-119 (213)
116 COG3545 Predicted esterase of 97.9 0.00012 2.6E-09 61.4 10.9 89 113-207 3-92 (181)
117 COG3509 LpqC Poly(3-hydroxybut 97.9 6E-05 1.3E-09 68.4 9.5 116 89-205 37-178 (312)
118 PF12740 Chlorophyllase2: Chlo 97.9 3E-05 6.4E-10 70.0 7.3 106 104-210 9-132 (259)
119 KOG2565|consensus 97.9 6.2E-05 1.3E-09 70.0 8.8 105 96-201 132-259 (469)
120 PRK10252 entF enterobactin syn 97.9 2.5E-05 5.4E-10 87.3 7.2 91 110-201 1066-1166(1296)
121 PLN02733 phosphatidylcholine-s 97.9 1.9E-05 4.2E-10 77.2 5.5 75 122-197 104-188 (440)
122 COG2945 Predicted hydrolase of 97.8 0.00012 2.6E-09 62.3 8.8 104 89-194 6-126 (210)
123 COG0657 Aes Esterase/lipase [L 97.8 0.00023 5.1E-09 66.9 11.1 83 110-194 77-175 (312)
124 COG4814 Uncharacterized protei 97.7 3.8E-05 8.2E-10 68.0 4.7 80 112-192 45-157 (288)
125 PF08840 BAAT_C: BAAT / Acyl-C 97.7 0.00011 2.3E-09 65.3 7.2 50 157-210 6-57 (213)
126 KOG3724|consensus 97.7 5.5E-05 1.2E-09 76.4 5.4 97 93-191 63-202 (973)
127 COG3319 Thioesterase domains o 97.7 0.00014 3.1E-09 65.9 7.6 89 113-202 1-99 (257)
128 PF00151 Lipase: Lipase; Inte 97.7 1.7E-05 3.6E-10 75.0 1.5 94 109-202 68-183 (331)
129 PF05990 DUF900: Alpha/beta hy 97.6 5.9E-05 1.3E-09 67.8 4.5 99 110-209 16-137 (233)
130 COG1075 LipA Predicted acetylt 97.4 0.00016 3.5E-09 68.6 4.7 88 112-201 59-159 (336)
131 PF07859 Abhydrolase_3: alpha/ 97.4 7.5E-05 1.6E-09 65.8 2.2 93 115-209 1-110 (211)
132 COG4782 Uncharacterized protei 97.4 0.00028 6E-09 65.9 5.4 101 110-210 114-235 (377)
133 PF05677 DUF818: Chlamydia CHL 97.3 0.0011 2.3E-08 61.7 8.3 102 89-193 114-237 (365)
134 KOG2100|consensus 97.3 0.0025 5.4E-08 66.9 12.0 130 79-212 489-647 (755)
135 COG4099 Predicted peptidase [G 97.3 0.0011 2.3E-08 60.2 7.9 109 94-202 168-300 (387)
136 COG4188 Predicted dienelactone 97.2 0.00073 1.6E-08 63.5 6.7 85 111-196 70-184 (365)
137 KOG1553|consensus 97.1 0.0017 3.8E-08 60.0 7.3 111 88-201 215-340 (517)
138 PRK05371 x-prolyl-dipeptidyl a 96.9 0.0019 4.2E-08 67.9 7.2 47 155-201 306-368 (767)
139 PRK04940 hypothetical protein; 96.9 0.0019 4.2E-08 55.1 5.8 35 171-211 60-94 (180)
140 cd00741 Lipase Lipase. Lipase 96.9 0.0017 3.8E-08 54.2 5.0 35 160-194 17-51 (153)
141 PF12146 Hydrolase_4: Putative 96.9 0.0039 8.5E-08 45.9 6.3 48 97-145 1-50 (79)
142 PF06057 VirJ: Bacterial virul 96.8 0.0019 4.2E-08 55.4 5.0 94 114-209 4-107 (192)
143 PF01764 Lipase_3: Lipase (cla 96.8 0.002 4.4E-08 52.7 5.0 38 156-193 49-86 (140)
144 KOG2112|consensus 96.8 0.0026 5.6E-08 55.1 5.6 88 112-200 3-122 (206)
145 PLN02633 palmitoyl protein thi 96.8 0.0044 9.5E-08 57.2 7.2 90 110-201 23-126 (314)
146 COG2272 PnbA Carboxylesterase 96.7 0.0035 7.6E-08 61.0 6.5 107 93-201 75-212 (491)
147 PF03403 PAF-AH_p_II: Platelet 96.7 0.0007 1.5E-08 65.4 1.6 31 110-141 98-129 (379)
148 PTZ00472 serine carboxypeptida 96.7 0.011 2.4E-07 58.6 10.0 95 97-191 60-191 (462)
149 cd00312 Esterase_lipase Estera 96.6 0.0087 1.9E-07 60.0 8.9 109 93-202 74-209 (493)
150 COG1770 PtrB Protease II [Amin 96.6 0.029 6.2E-07 56.5 12.0 118 84-201 416-557 (682)
151 smart00824 PKS_TE Thioesterase 96.5 0.01 2.2E-07 51.4 7.8 84 117-201 2-97 (212)
152 PLN02606 palmitoyl-protein thi 96.5 0.0067 1.5E-07 55.9 6.6 89 111-201 25-127 (306)
153 PF11288 DUF3089: Protein of u 96.5 0.0036 7.8E-08 54.7 4.5 51 151-202 74-129 (207)
154 PF02450 LCAT: Lecithin:choles 96.5 0.0021 4.5E-08 62.4 3.2 80 127-208 66-159 (389)
155 KOG3043|consensus 96.4 0.0069 1.5E-07 53.0 5.9 81 112-193 39-142 (242)
156 PF03583 LIP: Secretory lipase 96.4 0.003 6.4E-08 58.8 3.8 26 342-367 219-244 (290)
157 PF09752 DUF2048: Uncharacteri 96.3 0.014 3E-07 54.8 7.7 86 110-197 90-201 (348)
158 KOG3847|consensus 96.3 0.0028 6E-08 58.0 3.0 31 168-198 238-268 (399)
159 PRK10439 enterobactin/ferric e 96.3 0.022 4.7E-07 55.7 9.3 33 169-201 286-318 (411)
160 PF02089 Palm_thioest: Palmito 96.3 0.0021 4.6E-08 58.7 1.9 92 110-201 3-111 (279)
161 KOG2541|consensus 96.2 0.0086 1.9E-07 53.8 5.4 91 111-205 22-124 (296)
162 KOG1515|consensus 96.2 0.023 4.9E-07 53.7 8.5 124 85-211 61-209 (336)
163 COG2819 Predicted hydrolase of 96.2 0.05 1.1E-06 49.2 10.0 42 168-212 134-175 (264)
164 cd00519 Lipase_3 Lipase (class 96.1 0.0062 1.3E-07 54.5 4.3 36 158-193 115-150 (229)
165 PF12048 DUF3530: Protein of u 96.0 0.043 9.4E-07 51.5 9.5 117 85-202 59-225 (310)
166 PF02129 Peptidase_S15: X-Pro 95.9 0.011 2.5E-07 54.3 4.9 106 96-201 1-131 (272)
167 PF11187 DUF2974: Protein of u 95.9 0.022 4.7E-07 50.9 6.5 79 111-201 36-115 (224)
168 COG1505 Serine proteases of th 95.9 0.015 3.3E-07 57.8 5.7 116 84-201 391-530 (648)
169 COG0627 Predicted esterase [Ge 95.8 0.011 2.3E-07 55.5 4.3 38 171-211 152-189 (316)
170 COG3150 Predicted esterase [Ge 95.8 0.019 4.2E-07 47.9 5.1 78 115-193 2-81 (191)
171 KOG3975|consensus 95.7 0.06 1.3E-06 48.0 8.1 81 110-191 27-130 (301)
172 KOG2237|consensus 95.6 0.032 7E-07 55.9 6.9 118 82-201 436-579 (712)
173 PF06441 EHN: Epoxide hydrolas 95.5 0.018 3.9E-07 45.3 3.8 43 89-131 69-111 (112)
174 KOG3101|consensus 95.3 0.003 6.4E-08 54.7 -1.1 41 169-212 139-179 (283)
175 COG2936 Predicted acyl esteras 95.3 0.12 2.6E-06 51.8 9.8 117 83-199 15-152 (563)
176 PLN00413 triacylglycerol lipas 95.2 0.018 4E-07 56.1 3.8 37 154-190 267-303 (479)
177 PLN02162 triacylglycerol lipas 95.2 0.018 3.9E-07 56.1 3.5 35 156-190 263-297 (475)
178 PLN02454 triacylglycerol lipas 95.1 0.027 5.8E-07 54.4 4.4 36 156-191 211-248 (414)
179 PF00756 Esterase: Putative es 95.0 0.021 4.5E-07 51.6 3.4 29 173-201 117-145 (251)
180 KOG4627|consensus 94.8 0.064 1.4E-06 46.5 5.5 90 109-200 64-166 (270)
181 KOG2369|consensus 94.8 0.019 4.1E-07 55.6 2.6 68 126-194 124-205 (473)
182 KOG2281|consensus 94.7 0.18 4E-06 50.7 9.0 121 88-211 614-764 (867)
183 PLN02934 triacylglycerol lipas 94.6 0.031 6.7E-07 55.0 3.4 35 156-190 306-340 (515)
184 PLN02571 triacylglycerol lipas 94.4 0.046 9.9E-07 52.8 4.1 36 156-191 209-246 (413)
185 PF00135 COesterase: Carboxyle 94.3 0.053 1.1E-06 54.7 4.7 106 94-201 105-240 (535)
186 KOG4372|consensus 94.3 0.035 7.6E-07 52.9 3.0 76 110-187 78-166 (405)
187 PF04301 DUF452: Protein of un 94.3 0.84 1.8E-05 40.3 11.4 66 111-193 10-79 (213)
188 PLN02408 phospholipase A1 94.1 0.074 1.6E-06 50.6 4.7 36 157-192 184-221 (365)
189 PLN02517 phosphatidylcholine-s 94.0 0.04 8.7E-07 55.2 3.0 35 156-190 198-232 (642)
190 PF10340 DUF2424: Protein of u 93.8 0.079 1.7E-06 50.6 4.4 97 111-212 121-238 (374)
191 KOG2183|consensus 93.5 0.16 3.6E-06 48.5 5.9 101 112-215 80-209 (492)
192 PF01083 Cutinase: Cutinase; 93.3 0.17 3.7E-06 43.5 5.3 51 156-206 66-119 (179)
193 PLN02324 triacylglycerol lipas 93.3 0.11 2.4E-06 50.1 4.6 35 157-191 199-235 (415)
194 PLN02310 triacylglycerol lipas 93.1 0.12 2.5E-06 50.0 4.2 35 157-191 191-229 (405)
195 PLN02802 triacylglycerol lipas 92.6 0.13 2.8E-06 50.7 4.0 35 157-191 314-350 (509)
196 PLN02753 triacylglycerol lipas 92.5 0.17 3.6E-06 50.2 4.5 35 157-191 293-332 (531)
197 KOG4840|consensus 92.3 0.14 3.1E-06 44.9 3.3 98 113-212 37-147 (299)
198 PLN02847 triacylglycerol lipas 92.2 0.19 4.1E-06 50.5 4.6 45 164-210 244-291 (633)
199 PF00450 Peptidase_S10: Serine 92.2 0.53 1.1E-05 45.8 7.8 97 95-191 21-156 (415)
200 PLN02719 triacylglycerol lipas 92.1 0.16 3.5E-06 50.2 3.9 35 157-191 279-318 (518)
201 PLN02761 lipase class 3 family 92.0 0.17 3.7E-06 50.1 4.0 35 157-191 274-314 (527)
202 KOG3967|consensus 91.9 0.33 7.2E-06 42.3 5.1 39 162-201 181-219 (297)
203 PLN03037 lipase class 3 family 91.6 0.22 4.8E-06 49.3 4.3 34 158-191 301-338 (525)
204 KOG1516|consensus 91.0 0.83 1.8E-05 46.4 8.0 107 94-201 93-227 (545)
205 KOG4569|consensus 90.9 0.29 6.3E-06 46.5 4.2 37 155-191 155-191 (336)
206 PF05577 Peptidase_S28: Serine 90.3 0.36 7.8E-06 47.6 4.5 57 151-209 90-149 (434)
207 PF06259 Abhydrolase_8: Alpha/ 90.2 0.44 9.4E-06 40.8 4.3 46 156-201 93-139 (177)
208 COG3946 VirJ Type IV secretory 89.0 0.63 1.4E-05 44.5 4.7 82 113-196 261-351 (456)
209 PF08386 Abhydrolase_4: TAP-li 88.9 0.65 1.4E-05 35.9 4.1 29 341-369 33-61 (103)
210 PLN02209 serine carboxypeptida 88.4 1.4 3.1E-05 43.4 7.1 34 95-128 49-84 (437)
211 PF10142 PhoPQ_related: PhoPQ- 87.8 1.2 2.6E-05 42.8 5.8 32 338-369 258-289 (367)
212 PLN03016 sinapoylglucose-malat 87.2 2.2 4.7E-05 42.1 7.5 96 96-191 48-185 (433)
213 COG2939 Carboxypeptidase C (ca 86.4 3.8 8.2E-05 40.6 8.5 85 110-194 99-221 (498)
214 KOG1282|consensus 86.3 2.1 4.5E-05 42.3 6.7 97 95-191 54-188 (454)
215 PF05277 DUF726: Protein of un 85.9 0.88 1.9E-05 43.2 3.8 27 168-194 217-243 (345)
216 KOG4540|consensus 84.6 1 2.2E-05 41.1 3.4 35 158-192 263-297 (425)
217 COG5153 CVT17 Putative lipase 84.6 1 2.2E-05 41.1 3.4 35 158-192 263-297 (425)
218 COG2382 Fes Enterochelin ester 83.6 0.73 1.6E-05 42.5 2.1 37 171-210 177-213 (299)
219 KOG2551|consensus 79.6 3.2 7E-05 36.6 4.5 31 338-368 159-189 (230)
220 PF11144 DUF2920: Protein of u 76.6 3.4 7.3E-05 39.9 4.1 30 171-200 184-213 (403)
221 KOG3253|consensus 76.5 3.3 7.2E-05 41.8 4.2 35 167-201 246-281 (784)
222 COG1073 Hydrolases of the alph 74.2 1.9 4.1E-05 39.1 1.8 32 338-369 227-259 (299)
223 PF08237 PE-PPE: PE-PPE domain 69.1 9.1 0.0002 34.1 4.9 24 169-192 46-69 (225)
224 COG4947 Uncharacterized protei 68.4 5.9 0.00013 33.6 3.2 42 160-201 90-131 (227)
225 KOG2029|consensus 68.2 6.5 0.00014 39.7 4.0 23 168-190 522-545 (697)
226 PF07082 DUF1350: Protein of u 67.9 8.4 0.00018 34.7 4.3 67 127-194 35-113 (250)
227 KOG2551|consensus 67.7 4.3 9.3E-05 35.8 2.4 34 157-190 88-123 (230)
228 KOG2182|consensus 63.9 11 0.00025 37.2 4.7 99 109-209 83-208 (514)
229 COG0596 MhpC Predicted hydrola 63.1 6.9 0.00015 33.7 3.0 30 337-366 216-245 (282)
230 PF07519 Tannase: Tannase and 61.8 9.2 0.0002 38.2 3.8 40 169-211 113-152 (474)
231 smart00827 PKS_AT Acyl transfe 57.1 17 0.00036 33.6 4.6 29 163-191 74-102 (298)
232 PF05705 DUF829: Eukaryotic pr 55.5 7.6 0.00016 34.7 1.9 29 340-368 176-204 (240)
233 TIGR03131 malonate_mdcH malona 55.0 19 0.00042 33.2 4.6 31 161-191 66-96 (295)
234 KOG1202|consensus 51.7 24 0.00052 39.0 4.9 83 109-194 2120-2205(2376)
235 TIGR00128 fabD malonyl CoA-acy 51.4 22 0.00048 32.5 4.4 30 163-192 74-104 (290)
236 PF00698 Acyl_transf_1: Acyl t 51.3 13 0.00028 34.8 2.9 31 161-191 74-104 (318)
237 KOG3253|consensus 50.3 12 0.00027 37.9 2.5 35 334-368 296-330 (784)
238 KOG1283|consensus 46.3 67 0.0015 30.3 6.4 30 168-197 119-148 (414)
239 KOG1551|consensus 43.1 15 0.00032 33.5 1.6 29 168-196 192-220 (371)
240 TIGR03712 acc_sec_asp2 accesso 41.8 58 0.0013 32.4 5.6 98 93-194 271-381 (511)
241 cd00382 beta_CA Carbonic anhyd 41.2 33 0.00072 27.1 3.3 31 156-186 44-74 (119)
242 TIGR03100 hydr1_PEP hydrolase, 41.2 9.9 0.00021 34.8 0.3 20 338-357 203-222 (274)
243 PRK10279 hypothetical protein; 36.9 54 0.0012 30.6 4.5 30 165-194 27-56 (300)
244 cd00883 beta_CA_cladeA Carboni 36.5 41 0.0009 28.8 3.4 34 156-189 66-99 (182)
245 TIGR02816 pfaB_fam PfaB family 35.7 52 0.0011 33.5 4.4 27 166-192 260-286 (538)
246 KOG2385|consensus 34.5 56 0.0012 32.7 4.2 23 168-190 444-466 (633)
247 PF06309 Torsin: Torsin; Inte 34.0 37 0.0008 27.3 2.5 22 109-130 49-70 (127)
248 PF05576 Peptidase_S37: PS-10 33.9 33 0.00071 33.4 2.5 97 109-209 60-170 (448)
249 cd07225 Pat_PNPLA6_PNPLA7 Pata 33.1 82 0.0018 29.5 5.1 30 163-192 35-64 (306)
250 cd07198 Patatin Patatin-like p 33.0 1E+02 0.0022 25.8 5.3 30 165-194 20-49 (172)
251 PRK15219 carbonic anhydrase; P 32.1 59 0.0013 29.4 3.8 35 156-190 128-162 (245)
252 cd07207 Pat_ExoU_VipD_like Exo 31.0 1.1E+02 0.0024 26.0 5.3 29 165-193 21-49 (194)
253 COG0331 FabD (acyl-carrier-pro 30.0 60 0.0013 30.5 3.6 22 169-190 83-104 (310)
254 PF03283 PAE: Pectinacetyleste 28.2 93 0.002 29.9 4.6 35 156-190 139-175 (361)
255 PLN00416 carbonate dehydratase 28.1 70 0.0015 29.2 3.6 34 156-189 125-158 (258)
256 cd07210 Pat_hypo_W_succinogene 27.8 1.3E+02 0.0029 26.5 5.3 28 166-193 23-50 (221)
257 cd00884 beta_CA_cladeB Carboni 27.3 70 0.0015 27.7 3.3 34 156-189 72-105 (190)
258 cd07212 Pat_PNPLA9 Patatin-lik 27.1 1E+02 0.0022 28.9 4.7 32 161-192 18-53 (312)
259 cd07230 Pat_TGL4-5_like Triacy 27.0 93 0.002 30.6 4.5 38 161-199 92-129 (421)
260 PRK10437 carbonic anhydrase; P 26.9 75 0.0016 28.2 3.5 34 156-189 76-109 (220)
261 PLN03006 carbonate dehydratase 26.7 67 0.0015 29.9 3.2 33 156-188 157-189 (301)
262 cd07209 Pat_hypo_Ecoli_Z1214_l 26.4 1.3E+02 0.0029 26.2 5.1 29 165-193 20-48 (215)
263 PF02129 Peptidase_S15: X-Pro 26.0 49 0.0011 30.1 2.2 25 338-362 224-248 (272)
264 PF14253 AbiH: Bacteriophage a 25.8 36 0.00077 30.9 1.3 15 169-183 233-247 (270)
265 cd07232 Pat_PLPL Patain-like p 25.7 1E+02 0.0022 30.2 4.5 39 160-199 85-123 (407)
266 COG1752 RssA Predicted esteras 24.6 1.1E+02 0.0023 28.6 4.3 30 163-192 31-60 (306)
267 COG2830 Uncharacterized protei 24.6 92 0.002 26.3 3.3 65 113-193 12-79 (214)
268 cd07227 Pat_Fungal_NTE1 Fungal 23.9 1.2E+02 0.0026 27.9 4.3 29 164-192 31-59 (269)
269 PLN02154 carbonic anhydrase 23.9 92 0.002 28.9 3.5 34 156-189 151-184 (290)
270 PLN03019 carbonic anhydrase 23.7 77 0.0017 29.9 3.1 34 156-189 200-233 (330)
271 PLN03014 carbonic anhydrase 23.7 79 0.0017 30.1 3.1 34 156-189 205-238 (347)
272 cd07228 Pat_NTE_like_bacteria 22.9 2.1E+02 0.0045 24.0 5.4 33 161-194 19-51 (175)
273 cd07231 Pat_SDP1-like Sugar-De 22.4 1.4E+02 0.0031 28.1 4.5 31 166-196 91-121 (323)
274 cd07397 MPP_DevT Myxococcus xa 21.7 1.2E+02 0.0026 27.3 3.8 61 110-179 145-205 (238)
275 PF09994 DUF2235: Uncharacteri 21.6 1.3E+02 0.0028 27.6 4.1 36 156-191 76-112 (277)
276 PF00484 Pro_CA: Carbonic anhy 21.6 1.3E+02 0.0029 24.5 3.9 34 156-189 40-73 (153)
277 COG0288 CynT Carbonic anhydras 21.5 86 0.0019 27.5 2.8 35 156-190 77-111 (207)
278 PF09949 DUF2183: Uncharacteri 21.4 1.2E+02 0.0026 23.2 3.3 41 159-199 53-95 (100)
279 PF07643 DUF1598: Protein of u 21.3 1.9E+02 0.0041 21.4 4.0 35 156-190 28-62 (84)
280 cd07229 Pat_TGL3_like Triacylg 20.8 1.5E+02 0.0033 28.8 4.5 35 165-199 105-139 (391)
281 cd03379 beta_CA_cladeD Carboni 20.7 1.1E+02 0.0024 24.9 3.1 31 156-186 41-71 (142)
282 KOG4388|consensus 20.5 31 0.00067 35.0 -0.2 21 171-191 469-489 (880)
No 1
>KOG2624|consensus
Probab=100.00 E-value=1.2e-45 Score=349.55 Aligned_cols=295 Identities=40% Similarity=0.712 Sum_probs=261.4
Q ss_pred ccccccCCHHHHHHHcCCcceEEEEECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhHhhhccccc------------
Q psy6856 68 MLLTIRVSNTELLRKWGLSSETHRTKTQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDSWILRGQED------------ 135 (370)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~e~~~v~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~~~~~------------ 135 (370)
...+..++..++++.+||++|+|.|+|+|||+|.+||||.+.+.+|||+|+||+.+|+..|..+.++.
T Consensus 29 ~~~~~~~~~~~~i~~~gy~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYD 108 (403)
T KOG2624|consen 29 VDPELVMDTPEIIEKYGYPVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYD 108 (403)
T ss_pred ccchhcccHHHHHHHcCCceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCc
Confidence 34566778899999999999999999999999999999987788899999999999999999998765
Q ss_pred --c----CCcce-----ecCC------CCCCcccccCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhc
Q psy6856 136 --L----GNLYK-----LYPK------NVNWHEHGLYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRK 198 (370)
Q Consensus 136 --L----~~~~~-----~~~~------~~~~~~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~ 198 (370)
| |+.|+ +++. +++++|++.||++|.|+++++.++.+++++||||+|+++.+.+++.+|+..++
T Consensus 109 VWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~k 188 (403)
T KOG2624|consen 109 VWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKK 188 (403)
T ss_pred eeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhh
Confidence 1 34454 3331 88999999999999999999999999999999999999999999999999999
Q ss_pred cceeeccccceeecCCCcccee--eeeccccHHHHHHHhhhccccccc-chhhhhHH-HcccCCC-ChhhhHHhhhhhhc
Q psy6856 199 INLQISLAPVAYVSRMKSYPLV--FKHFADNIKYITKVLRKNRKYEIL-ERRLANPI-AIICKDP-TLRPICYQAAFLII 273 (370)
Q Consensus 199 l~~~~~~aP~~~~~~~~~~~~~--l~~~~~~~~~l~~~~~~~g~~~~~-~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~ 273 (370)
|..++++||++++.+... +.. +.........+... +|..+|+ .+.+.+.+ ..+|... ....+|...++.+.
T Consensus 189 I~~~~aLAP~~~~k~~~~-~~~~~~~~~~~~~~~~~~~---fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~ 264 (403)
T KOG2624|consen 189 IKSFIALAPAAFPKHIKS-LLNKFLDPFLGAFSLLPLL---FGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLV 264 (403)
T ss_pred hheeeeecchhhhccccc-HHHHhhhhhhhhhhHHHHh---cCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHc
Confidence 999999999999886666 543 22222222234455 8888999 88899988 9999855 88999999999999
Q ss_pred cCCCCCCCChhHHHHHHhcCCCceeeccccceeeehccCccccccCCccccccccCCCCCCCccCCCCCCcEEEEeeCCC
Q psy6856 274 GPDLYQMPDENIITAILTHFPAGTSFKNVIHYLQNIKALDFQGYDYGHFENMRRYGNFFSPRYNLSAITAPVALFYSNND 353 (370)
Q Consensus 274 G~~~~~~~~~~~~~~~~~~~p~~~s~~~~~h~~~~~~~~~f~~~d~g~~~n~~~y~~~~~~~~~l~~I~~PvLli~G~~D 353 (370)
|++..++ +..+.+.+..+.|+++|++++.||.|+.+++.|++||+|..+|...|++.+||+|++++|++||.+++|++|
T Consensus 265 G~~~~~~-n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D 343 (403)
T KOG2624|consen 265 GWNSNNW-NTTLLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDND 343 (403)
T ss_pred CcchHhh-hhcccchhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCc
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCHHhHHhcccc
Q psy6856 354 YLSHPACNQHGALN 367 (370)
Q Consensus 354 ~lv~~~~~~~L~~~ 367 (370)
+++++++++++...
T Consensus 344 ~l~~~~DV~~~~~~ 357 (403)
T KOG2624|consen 344 WLADPEDVLILLLV 357 (403)
T ss_pred ccCCHHHHHHHHHh
Confidence 99999999977644
No 2
>PLN02872 triacylglycerol lipase
Probab=100.00 E-value=2.1e-40 Score=318.20 Aligned_cols=283 Identities=28% Similarity=0.490 Sum_probs=230.9
Q ss_pred HHHHHHHcCCcceEEEEECCCCcEEEEEEEcCCC-----CCCCeEEEeCCCCCChhHhhhccccc-----c-CCcce---
Q psy6856 76 NTELLRKWGLSSETHRTKTQDGYTLTMHRIVPKY-----ANSPPVLLQHGLCLASDSWILRGQED-----L-GNLYK--- 141 (370)
Q Consensus 76 ~~~~~~~~~~~~e~~~v~t~dG~~l~~~~i~~~~-----~~~~~vlllHG~~~~~~~w~~~~~~~-----L-~~~~~--- 141 (370)
++++++.+|||+|+|.|+|+||+.|.++|+|.+. ..+|+|||+||++.++..|..+.+.. | .+||.
T Consensus 33 ~~~~i~~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l 112 (395)
T PLN02872 33 CAQLIHPAGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWV 112 (395)
T ss_pred HHHHHHHcCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccc
Confidence 4788999999999999999999999999998432 24689999999999999996544311 2 34555
Q ss_pred ecCC-------------------CCCCcccccCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhcccee
Q psy6856 142 LYPK-------------------NVNWHEHGLYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 142 ~~~~-------------------~~~~~~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
.+.+ ++++++++.+|+++.++++++..+ +++++|||||||.+++.++ .+|+..+++..+
T Consensus 113 ~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~-~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~ 190 (395)
T PLN02872 113 GNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITN-SKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAA 190 (395)
T ss_pred ccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccC-CceEEEEECHHHHHHHHHh-hChHHHHHHHHH
Confidence 2211 355667777899999999987655 7999999999999999655 679988888888
Q ss_pred eccccceeecCCCccceeeeeccccHHHHHHHhhhccccccc-chhhhhHH-HcccCCCChhhhHHhhhhhhccCCCCCC
Q psy6856 203 ISLAPVAYVSRMKSYPLVFKHFADNIKYITKVLRKNRKYEIL-ERRLANPI-AIICKDPTLRPICYQAAFLIIGPDLYQM 280 (370)
Q Consensus 203 ~~~aP~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~g~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 280 (370)
++++|.++..+..+ ++. ..+.. ..+...+..+|..+|+ .+.+...+ ..+|... ..|..+++.+.|.+ ..+
T Consensus 191 ~~l~P~~~~~~~~~-~~~-~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~---~~c~~~~~~~~g~~-~~~ 262 (395)
T PLN02872 191 ALLCPISYLDHVTA-PLV-LRMVF--MHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGH---MDCNDLLTSITGTN-CCF 262 (395)
T ss_pred HHhcchhhhccCCC-HHH-HHHHH--HhHHHHHHHhcCceecCCcHHHHHHHHHHccCc---hhHHHHHHHHhCCC-ccc
Confidence 99999999877776 553 00000 0111222337888888 77777777 8889742 34999999999988 568
Q ss_pred CChhHHHHHHhcCCCceeeccccceeeehccCccccccCCccccccccCCCCCCCccCCCC--CCcEEEEeeCCCcccCH
Q psy6856 281 PDENIITAILTHFPAGTSFKNVIHYLQNIKALDFQGYDYGHFENMRRYGNFFSPRYNLSAI--TAPVALFYSNNDYLSHP 358 (370)
Q Consensus 281 ~~~~~~~~~~~~~p~~~s~~~~~h~~~~~~~~~f~~~d~g~~~n~~~y~~~~~~~~~l~~I--~~PvLli~G~~D~lv~~ 358 (370)
|.++++.+..+.|.++|++++.||.|..++++|++||||..+|+..|++.+||.|++++| ++|+++++|++|+++++
T Consensus 263 -n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~ 341 (395)
T PLN02872 263 -NASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADV 341 (395)
T ss_pred -chhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCH
Confidence 999999999999999999999999999999999999999888999999999999999999 58999999999999999
Q ss_pred HhHHhcccccC
Q psy6856 359 ACNQHGALNRE 369 (370)
Q Consensus 359 ~~~~~L~~~~~ 369 (370)
++++++.+..+
T Consensus 342 ~dv~~l~~~Lp 352 (395)
T PLN02872 342 TDVEHTLAELP 352 (395)
T ss_pred HHHHHHHHHCC
Confidence 99999887654
No 3
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.79 E-value=1.7e-18 Score=159.92 Aligned_cols=106 Identities=15% Similarity=0.093 Sum_probs=83.6
Q ss_pred CCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhHhhhccccccCCcce-ecCC----CCCCc---ccccCCHHHHHHHHHH
Q psy6856 95 QDGYTLTMHRIVPKYANSPPVLLQHGLCLASDSWILRGQEDLGNLYK-LYPK----NVNWH---EHGLYDVPAMIDYILS 166 (370)
Q Consensus 95 ~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~~~~~L~~~~~-~~~~----~~~~~---~~~~~D~~~~i~~l~~ 166 (370)
-||.+++++... +.+.++||||+||++++...|..+.+. |..+|+ +.+| +.+.. .....++.++++.+++
T Consensus 9 ~~~~~~~~~~~~-~~~~~~plvllHG~~~~~~~w~~~~~~-L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~ 86 (276)
T TIGR02240 9 LDGQSIRTAVRP-GKEGLTPLLIFNGIGANLELVFPFIEA-LDPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLD 86 (276)
T ss_pred cCCcEEEEEEec-CCCCCCcEEEEeCCCcchHHHHHHHHH-hccCceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHH
Confidence 367777765543 223458999999999999999999998 977788 5554 22221 2334467778888899
Q ss_pred HcCCCCEEEEEeChhHHHHHHHHhcChhhhhcccee
Q psy6856 167 VTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 167 ~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
.+++++++|+||||||.+++.+|.++|+++++++++
T Consensus 87 ~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~ 122 (276)
T TIGR02240 87 YLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILA 122 (276)
T ss_pred HhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEe
Confidence 999999999999999999999999999999999874
No 4
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.79 E-value=1e-18 Score=162.82 Aligned_cols=105 Identities=18% Similarity=0.162 Sum_probs=81.0
Q ss_pred CCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhHhhhccccccCCcce-ecCC----CCCCc----------ccccCCHH
Q psy6856 94 TQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDSWILRGQEDLGNLYK-LYPK----NVNWH----------EHGLYDVP 158 (370)
Q Consensus 94 t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~~~~~L~~~~~-~~~~----~~~~~----------~~~~~D~~ 158 (370)
+-+|..+.+.. .| +++++|||+||+++++..|..+.+. |...|+ +.+| +.|.. .+...|+.
T Consensus 14 ~~~~~~i~y~~--~G-~~~~~vlllHG~~~~~~~w~~~~~~-L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a 89 (294)
T PLN02824 14 RWKGYNIRYQR--AG-TSGPALVLVHGFGGNADHWRKNTPV-LAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWG 89 (294)
T ss_pred EEcCeEEEEEE--cC-CCCCeEEEECCCCCChhHHHHHHHH-HHhCCeEEEEcCCCCCCCCCCccccccccccCCHHHHH
Confidence 33566665433 33 2458999999999999999999999 876677 5555 22211 13334667
Q ss_pred HHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhcccee
Q psy6856 159 AMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 159 ~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
+++..+++.++.++++++||||||.+++.+|.++|+++++++++
T Consensus 90 ~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili 133 (294)
T PLN02824 90 EQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLI 133 (294)
T ss_pred HHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEE
Confidence 78888888999999999999999999999999999999998864
No 5
>KOG4178|consensus
Probab=99.78 E-value=1.8e-18 Score=157.37 Aligned_cols=117 Identities=21% Similarity=0.252 Sum_probs=96.1
Q ss_pred eEEEEECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhHhhhcccccc-CCcce-ecCC--CCC-------CcccccCC
Q psy6856 88 ETHRTKTQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDSWILRGQEDL-GNLYK-LYPK--NVN-------WHEHGLYD 156 (370)
Q Consensus 88 e~~~v~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~~~~~L-~~~~~-~~~~--~~~-------~~~~~~~D 156 (370)
-+|...|-+| +.+|.+..+.+.+|.|+++||++.++.+|+.+.+. | ..+|+ +++| ++. .+++...-
T Consensus 22 ~~hk~~~~~g--I~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~-la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~ 98 (322)
T KOG4178|consen 22 ISHKFVTYKG--IRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPG-LASRGYRVIAPDLRGYGFSDAPPHISEYTIDE 98 (322)
T ss_pred cceeeEEEcc--EEEEEEeecCCCCCEEEEEccCCccchhhhhhhhh-hhhcceEEEecCCCCCCCCCCCCCcceeeHHH
Confidence 4677777777 67777777788999999999999999999999999 9 55698 6666 221 13344445
Q ss_pred HHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhccceeecccc
Q psy6856 157 VPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQISLAP 207 (370)
Q Consensus 157 ~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~aP 207 (370)
+..++..+++.+|.++++++||+||+.+|+.+|..+|++|++++.+....+
T Consensus 99 l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 99 LVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP 149 (322)
T ss_pred HHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC
Confidence 677888999999999999999999999999999999999999988654444
No 6
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.77 E-value=6.3e-18 Score=157.66 Aligned_cols=104 Identities=18% Similarity=0.249 Sum_probs=80.8
Q ss_pred CCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhHhhhccccccCCcce-ecCC----CCCCc---ccccCCHHHHHHHHH
Q psy6856 94 TQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDSWILRGQEDLGNLYK-LYPK----NVNWH---EHGLYDVPAMIDYIL 165 (370)
Q Consensus 94 t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~~~~~L~~~~~-~~~~----~~~~~---~~~~~D~~~~i~~l~ 165 (370)
+.||..+.+.. . ++++||||+||++++...|..+.+. |...|+ +.+| +.+.. ++...+..+++..++
T Consensus 13 ~~~g~~i~y~~--~--G~g~~vvllHG~~~~~~~w~~~~~~-L~~~~~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll 87 (295)
T PRK03592 13 EVLGSRMAYIE--T--GEGDPIVFLHGNPTSSYLWRNIIPH-LAGLGRCLAPDLIGMGASDKPDIDYTFADHARYLDAWF 87 (295)
T ss_pred EECCEEEEEEE--e--CCCCEEEEECCCCCCHHHHHHHHHH-HhhCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 44776665443 2 3568999999999999999999998 866667 5555 22221 223335566777888
Q ss_pred HHcCCCCEEEEEeChhHHHHHHHHhcChhhhhcccee
Q psy6856 166 SVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 166 ~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
+.++.++++++||||||.+|+.+|.++|+++++++++
T Consensus 88 ~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~ 124 (295)
T PRK03592 88 DALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFM 124 (295)
T ss_pred HHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEE
Confidence 9999999999999999999999999999999998764
No 7
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.77 E-value=5.6e-18 Score=158.62 Aligned_cols=117 Identities=17% Similarity=0.130 Sum_probs=88.4
Q ss_pred CcceEEE--EECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhHhhhccccccC-Ccce-ecCC----CCCC--c---c
Q psy6856 85 LSSETHR--TKTQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDSWILRGQEDLG-NLYK-LYPK----NVNW--H---E 151 (370)
Q Consensus 85 ~~~e~~~--v~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~~~~~L~-~~~~-~~~~----~~~~--~---~ 151 (370)
||..... +...||....+++...|.+++++|||+||++++...|..+++. |. .+|+ +.+| +.+. . .
T Consensus 17 ~~~~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~-L~~~gy~vi~~Dl~G~G~S~~~~~~~~ 95 (302)
T PRK00870 17 YPFAPHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPI-LAAAGHRVIAPDLIGFGRSDKPTRRED 95 (302)
T ss_pred CCCCceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHH-HHhCCCEEEEECCCCCCCCCCCCCccc
Confidence 4444433 3444566666666666655678999999999999999999998 94 5798 5555 2221 1 1
Q ss_pred cccCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhcccee
Q psy6856 152 HGLYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 152 ~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
+...+..+++..++++++.++++++||||||.+|+.+|.++|+.+.+++++
T Consensus 96 ~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 146 (302)
T PRK00870 96 YTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVA 146 (302)
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEe
Confidence 233356677777888899999999999999999999999999999998764
No 8
>PLN02578 hydrolase
Probab=99.72 E-value=1.9e-16 Score=151.66 Aligned_cols=107 Identities=20% Similarity=0.209 Sum_probs=79.2
Q ss_pred EEECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhHhhhccccccCCcce-ecCC--C--CCCcccccCC---HHHHHH
Q psy6856 91 RTKTQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDSWILRGQEDLGNLYK-LYPK--N--VNWHEHGLYD---VPAMID 162 (370)
Q Consensus 91 ~v~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~~~~~L~~~~~-~~~~--~--~~~~~~~~~D---~~~~i~ 162 (370)
...+.+|..+++ ... ++++||||+||++++...|..+.+. |.++|+ +.+| + .+......++ +.+++.
T Consensus 69 ~~~~~~~~~i~Y--~~~--g~g~~vvliHG~~~~~~~w~~~~~~-l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~ 143 (354)
T PLN02578 69 NFWTWRGHKIHY--VVQ--GEGLPIVLIHGFGASAFHWRYNIPE-LAKKYKVYALDLLGFGWSDKALIEYDAMVWRDQVA 143 (354)
T ss_pred eEEEECCEEEEE--EEc--CCCCeEEEECCCCCCHHHHHHHHHH-HhcCCEEEEECCCCCCCCCCcccccCHHHHHHHHH
Confidence 333445655543 333 3568999999999999999999999 977888 5554 2 2222222233 345666
Q ss_pred HHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhcccee
Q psy6856 163 YILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 163 ~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
.+++.++.++++++||||||.+++.+|.++|+++++++++
T Consensus 144 ~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv 183 (354)
T PLN02578 144 DFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALL 183 (354)
T ss_pred HHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEE
Confidence 6677788899999999999999999999999999998864
No 9
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.71 E-value=8.3e-17 Score=154.46 Aligned_cols=91 Identities=22% Similarity=0.247 Sum_probs=72.9
Q ss_pred CCCeEEEeCCCCCChhHhhhccccccCCcce-ecCC----CCCCc----ccccCCHHHHHHHHHHHcCCCCEEEEEeChh
Q psy6856 111 NSPPVLLQHGLCLASDSWILRGQEDLGNLYK-LYPK----NVNWH----EHGLYDVPAMIDYILSVTRRPTLSYIGHSMG 181 (370)
Q Consensus 111 ~~~~vlllHG~~~~~~~w~~~~~~~L~~~~~-~~~~----~~~~~----~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~G 181 (370)
.+|||||+||++++...|..+++. |..+|+ +.+| +.+.. .+...++.+++..+++.++.++++++|||||
T Consensus 87 ~gp~lvllHG~~~~~~~w~~~~~~-L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~G 165 (360)
T PLN02679 87 SGPPVLLVHGFGASIPHWRRNIGV-LAKNYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEVVQKPTVLIGNSVG 165 (360)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHH-HhcCCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHhcCCCeEEEEECHH
Confidence 458999999999999999999998 977888 5555 22211 1222356667777788899999999999999
Q ss_pred HHHHHHHHhc-Chhhhhcccee
Q psy6856 182 TTMFYVMASM-RPEYNRKINLQ 202 (370)
Q Consensus 182 G~va~~~a~~-~p~~v~~l~~~ 202 (370)
|.+++.+|++ +|+++++++++
T Consensus 166 g~ia~~~a~~~~P~rV~~LVLi 187 (360)
T PLN02679 166 SLACVIAASESTRDLVRGLVLL 187 (360)
T ss_pred HHHHHHHHHhcChhhcCEEEEE
Confidence 9999998874 79999999874
No 10
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.71 E-value=7.1e-17 Score=150.07 Aligned_cols=116 Identities=16% Similarity=0.107 Sum_probs=89.2
Q ss_pred HHcCCcceEEEEECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhHhhhccccccCCcce-ecCC----CCCCc----c
Q psy6856 81 RKWGLSSETHRTKTQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDSWILRGQEDLGNLYK-LYPK----NVNWH----E 151 (370)
Q Consensus 81 ~~~~~~~e~~~v~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~~~~~L~~~~~-~~~~----~~~~~----~ 151 (370)
..+.++.++..+++. |..++ +...| ++++|||+||++.+...|..+.+. |.++|+ +.+| +.+.. +
T Consensus 8 ~~~~~~~~~~~~~~~-~~~i~--y~~~G--~~~~iv~lHG~~~~~~~~~~~~~~-l~~~~~vi~~D~~G~G~S~~~~~~~ 81 (286)
T PRK03204 8 DPQLYPFESRWFDSS-RGRIH--YIDEG--TGPPILLCHGNPTWSFLYRDIIVA-LRDRFRCVAPDYLGFGLSERPSGFG 81 (286)
T ss_pred CCccccccceEEEcC-CcEEE--EEECC--CCCEEEEECCCCccHHHHHHHHHH-HhCCcEEEEECCCCCCCCCCCCccc
Confidence 344677788887774 55454 33333 568999999999999999999998 877888 5544 22211 1
Q ss_pred cccCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhcccee
Q psy6856 152 HGLYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 152 ~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
....+..+++..+++.++.++++++||||||.+++.+|.++|+++++++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~ 132 (286)
T PRK03204 82 YQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLG 132 (286)
T ss_pred cCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEE
Confidence 223467778888899999999999999999999999999999999998753
No 11
>PHA02857 monoglyceride lipase; Provisional
Probab=99.70 E-value=1.2e-16 Score=147.35 Aligned_cols=111 Identities=14% Similarity=0.081 Sum_probs=78.3
Q ss_pred EEECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhHhhhcccccc-CCcce-ecCC----CCCC-cccccCCHHHHHHH
Q psy6856 91 RTKTQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDSWILRGQEDL-GNLYK-LYPK----NVNW-HEHGLYDVPAMIDY 163 (370)
Q Consensus 91 ~v~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~~~~~L-~~~~~-~~~~----~~~~-~~~~~~D~~~~i~~ 163 (370)
.+.+.||..|.+..+..+...++.|+++||+++++..|...++. | .++|+ +.+| +.+. ......++...++.
T Consensus 4 ~~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~-l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d 82 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAEN-ISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRD 82 (276)
T ss_pred eeecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHH-HHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHH
Confidence 34677999998866554334456677779999999999999998 8 56888 5555 2221 12222344444444
Q ss_pred HHHH-------cCCCCEEEEEeChhHHHHHHHHhcChhhhhcccee
Q psy6856 164 ILSV-------TRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 164 l~~~-------~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
+++. .+..+++++||||||++|+.+|.++|+.+++++++
T Consensus 83 ~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~ 128 (276)
T PHA02857 83 VVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILM 128 (276)
T ss_pred HHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEe
Confidence 4333 34468999999999999999999999988887653
No 12
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.70 E-value=1e-16 Score=145.73 Aligned_cols=93 Identities=20% Similarity=0.237 Sum_probs=76.0
Q ss_pred CCCCCeEEEeCCCCCChhHhhhccccccCCcce---ecCCC--CC--CcccccCCHHHHHHHHHHHcCCCCEEEEEeChh
Q psy6856 109 YANSPPVLLQHGLCLASDSWILRGQEDLGNLYK---LYPKN--VN--WHEHGLYDVPAMIDYILSVTRRPTLSYIGHSMG 181 (370)
Q Consensus 109 ~~~~~~vlllHG~~~~~~~w~~~~~~~L~~~~~---~~~~~--~~--~~~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~G 181 (370)
.+++|||||+||++++...|...... |.++|+ +|.++ .+ ...+...++.+++..+++.++.++++++|||||
T Consensus 13 ~~~~~~iv~lhG~~~~~~~~~~~~~~-l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~G 91 (255)
T PRK10673 13 PHNNSPIVLVHGLFGSLDNLGVLARD-LVNDHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDALQIEKATFIGHSMG 91 (255)
T ss_pred CCCCCCEEEECCCCCchhHHHHHHHH-HhhCCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceEEEEECHH
Confidence 45789999999999999999999998 877888 44442 11 223334466677788888899999999999999
Q ss_pred HHHHHHHHhcChhhhhcccee
Q psy6856 182 TTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 182 G~va~~~a~~~p~~v~~l~~~ 202 (370)
|.+++.+|.++|+++++++++
T Consensus 92 g~va~~~a~~~~~~v~~lvli 112 (255)
T PRK10673 92 GKAVMALTALAPDRIDKLVAI 112 (255)
T ss_pred HHHHHHHHHhCHhhcceEEEE
Confidence 999999999999999999874
No 13
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.70 E-value=4.9e-16 Score=143.52 Aligned_cols=108 Identities=16% Similarity=0.186 Sum_probs=76.1
Q ss_pred EECCCCcE-EEEEEEcCCCCCCCeEEEeCCCCCChhHhhhc---ccccc-CCcce-ecCC----CCCCc---c-cccCCH
Q psy6856 92 TKTQDGYT-LTMHRIVPKYANSPPVLLQHGLCLASDSWILR---GQEDL-GNLYK-LYPK----NVNWH---E-HGLYDV 157 (370)
Q Consensus 92 v~t~dG~~-l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~---~~~~L-~~~~~-~~~~----~~~~~---~-~~~~D~ 157 (370)
+.|.+|.. ..+++... +++++|||+||++++...|... ... + +.+|+ +.+| +.+.. + ....+.
T Consensus 11 ~~~~~~~~~~~~~y~~~--g~~~~ivllHG~~~~~~~~~~~~~~~~~-l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 87 (282)
T TIGR03343 11 KINEKGLSNFRIHYNEA--GNGEAVIMLHGGGPGAGGWSNYYRNIGP-FVDAGYRVILKDSPGFNKSDAVVMDEQRGLVN 87 (282)
T ss_pred EcccccccceeEEEEec--CCCCeEEEECCCCCchhhHHHHHHHHHH-HHhCCCEEEEECCCCCCCCCCCcCcccccchh
Confidence 34555543 34444443 3568999999999998888643 333 3 56788 5544 22211 1 111134
Q ss_pred HHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhcccee
Q psy6856 158 PAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 158 ~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
.+++..+++.++.++++++||||||.+++.+|.++|+++++++++
T Consensus 88 ~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~ 132 (282)
T TIGR03343 88 ARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILM 132 (282)
T ss_pred HHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEE
Confidence 667888899999999999999999999999999999999988764
No 14
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.70 E-value=1.3e-16 Score=146.57 Aligned_cols=107 Identities=18% Similarity=0.202 Sum_probs=81.2
Q ss_pred ECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhHhhhccccccCCcce-ecCC----CCCC---c-ccccCCHHHHHHH
Q psy6856 93 KTQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDSWILRGQEDLGNLYK-LYPK----NVNW---H-EHGLYDVPAMIDY 163 (370)
Q Consensus 93 ~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~~~~~L~~~~~-~~~~----~~~~---~-~~~~~D~~~~i~~ 163 (370)
.+-+|..+.+.. .+...+++||++||++++...|....+. |.++|+ +.+| +.+. . .....++.+++..
T Consensus 11 ~~~~~~~~~~~~--~g~~~~~~vv~~hG~~~~~~~~~~~~~~-l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~ 87 (278)
T TIGR03056 11 VTVGPFHWHVQD--MGPTAGPLLLLLHGTGASTHSWRDLMPP-LARSFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSA 87 (278)
T ss_pred eeECCEEEEEEe--cCCCCCCeEEEEcCCCCCHHHHHHHHHH-HhhCcEEEeecCCCCCCCCCccccCCCHHHHHHHHHH
Confidence 344676655433 3344578999999999999999999998 987888 4444 2111 1 2333466777788
Q ss_pred HHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhcccee
Q psy6856 164 ILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 164 l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
+++.++.++++++||||||.+++.+|.++|+++++++++
T Consensus 88 ~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~ 126 (278)
T TIGR03056 88 LCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGI 126 (278)
T ss_pred HHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEE
Confidence 888888899999999999999999999999988877753
No 15
>KOG4391|consensus
Probab=99.67 E-value=1e-16 Score=136.36 Aligned_cols=149 Identities=17% Similarity=0.219 Sum_probs=114.2
Q ss_pred cchhHHHHHHhhhhccccccccccccCCHHHHHHHcCCcceEEEEECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhH
Q psy6856 48 GLSITAIMFKSLRKISFISVMLLTIRVSNTELLRKWGLSSETHRTKTQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDS 127 (370)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~v~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~ 127 (370)
+..+.+++|..|..++|.+ -++.++ ...+.|+..+.|+|...+.|.|..+|+.|.+.. ..+.|+++++||+.||.++
T Consensus 17 t~I~l~~lY~yQ~~LvYps-~pqgsR-~~vptP~~~n~pye~i~l~T~D~vtL~a~~~~~-E~S~pTlLyfh~NAGNmGh 93 (300)
T KOG4391|consen 17 TLIALGFLYKYQKTLVYPS-FPQGSR-ENVPTPKEFNMPYERIELRTRDKVTLDAYLMLS-ESSRPTLLYFHANAGNMGH 93 (300)
T ss_pred HHHHHHHHHHHhceeeccC-cccccc-cCCCCccccCCCceEEEEEcCcceeEeeeeecc-cCCCceEEEEccCCCcccc
Confidence 4445566788899888866 443443 455679999999999999999999999988874 3588999999999999999
Q ss_pred hhhcccccc--CCcce---ecCC-----CCCCcccc-cCCHHHHHHHHHHH--cCCCCEEEEEeChhHHHHHHHHhcChh
Q psy6856 128 WILRGQEDL--GNLYK---LYPK-----NVNWHEHG-LYDVPAMIDYILSV--TRRPTLSYIGHSMGTTMFYVMASMRPE 194 (370)
Q Consensus 128 w~~~~~~~L--~~~~~---~~~~-----~~~~~~~~-~~D~~~~i~~l~~~--~~~~~~~lvGhS~GG~va~~~a~~~p~ 194 (370)
+..++.- + .-+.+ +++| ..+..|.+ ..|..+++++++.+ ++..|++++|.|+||++|+.+|+++.+
T Consensus 94 r~~i~~~-fy~~l~mnv~ivsYRGYG~S~GspsE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ 172 (300)
T KOG4391|consen 94 RLPIARV-FYVNLKMNVLIVSYRGYGKSEGSPSEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD 172 (300)
T ss_pred hhhHHHH-HHHHcCceEEEEEeeccccCCCCccccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchh
Confidence 8877766 4 11222 5666 22233333 34999999999887 455799999999999999999999887
Q ss_pred hhhccc
Q psy6856 195 YNRKIN 200 (370)
Q Consensus 195 ~v~~l~ 200 (370)
++..++
T Consensus 173 ri~~~i 178 (300)
T KOG4391|consen 173 RISAII 178 (300)
T ss_pred heeeee
Confidence 665554
No 16
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.67 E-value=5.7e-16 Score=152.08 Aligned_cols=109 Identities=19% Similarity=0.258 Sum_probs=75.7
Q ss_pred ECCCCcEEEEEEEcCC-CCCCCeEEEeCCCCCChhHhhh-ccccccC----Ccce-ecCC--CC--CCc----ccccCCH
Q psy6856 93 KTQDGYTLTMHRIVPK-YANSPPVLLQHGLCLASDSWIL-RGQEDLG----NLYK-LYPK--NV--NWH----EHGLYDV 157 (370)
Q Consensus 93 ~t~dG~~l~~~~i~~~-~~~~~~vlllHG~~~~~~~w~~-~~~~~L~----~~~~-~~~~--~~--~~~----~~~~~D~ 157 (370)
.+..|..|+++.-... .+.+++|||+||++++...|.. +.+. |. .+|+ +.+| ++ +.. .+...+.
T Consensus 181 ~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~-L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~ 259 (481)
T PLN03087 181 LSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPN-FSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREH 259 (481)
T ss_pred EeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHH-HHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHH
Confidence 3334455655543322 2336899999999999999985 3455 53 5788 5555 22 211 1222244
Q ss_pred HHHH-HHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhcccee
Q psy6856 158 PAMI-DYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 158 ~~~i-~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
.+++ ..+++.++.++++++||||||.+++.+|.++|+++++++++
T Consensus 260 a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi 305 (481)
T PLN03087 260 LEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLL 305 (481)
T ss_pred HHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEE
Confidence 4555 36788899999999999999999999999999999998763
No 17
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.67 E-value=6.1e-16 Score=147.88 Aligned_cols=119 Identities=13% Similarity=0.049 Sum_probs=82.5
Q ss_pred cCCcceEEEEECCCCcEEEEEEE-cCCCCCCCeEEEeCCCCCChhH-hhhcccccc-CCcce-ecCC----CCCCc--cc
Q psy6856 83 WGLSSETHRTKTQDGYTLTMHRI-VPKYANSPPVLLQHGLCLASDS-WILRGQEDL-GNLYK-LYPK----NVNWH--EH 152 (370)
Q Consensus 83 ~~~~~e~~~v~t~dG~~l~~~~i-~~~~~~~~~vlllHG~~~~~~~-w~~~~~~~L-~~~~~-~~~~----~~~~~--~~ 152 (370)
.|+..++....+.||..|..... |.+...+++|||+||++++... |....+. | .+||+ +.+| +.+.. ..
T Consensus 57 ~~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~-l~~~g~~v~~~D~~G~G~S~~~~~~ 135 (349)
T PLN02385 57 SGIKTEESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARK-IASSGYGVFAMDYPGFGLSEGLHGY 135 (349)
T ss_pred cCcceeeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHH-HHhCCCEEEEecCCCCCCCCCCCCC
Confidence 35667777888999998876554 3222456889999999998765 6778777 7 45898 5554 22211 11
Q ss_pred --ccCCHHHHHHHHHHHcCC------CCEEEEEeChhHHHHHHHHhcChhhhhcccee
Q psy6856 153 --GLYDVPAMIDYILSVTRR------PTLSYIGHSMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 153 --~~~D~~~~i~~l~~~~~~------~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
...++.+++..+++.++. .+++|+||||||++++.+|.++|+++++++++
T Consensus 136 ~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi 193 (349)
T PLN02385 136 IPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILV 193 (349)
T ss_pred cCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEe
Confidence 112334444444444432 37999999999999999999999999888764
No 18
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.67 E-value=7.2e-16 Score=140.66 Aligned_cols=87 Identities=18% Similarity=0.282 Sum_probs=69.2
Q ss_pred CeEEEeCCCCCChhHhhhccccccCCcce-ecCC----CCCCcccccCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHH
Q psy6856 113 PPVLLQHGLCLASDSWILRGQEDLGNLYK-LYPK----NVNWHEHGLYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYV 187 (370)
Q Consensus 113 ~~vlllHG~~~~~~~w~~~~~~~L~~~~~-~~~~----~~~~~~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~ 187 (370)
|+|||+||++++...|..+.+. |...|+ +.+| +.+.. ...+++.+.++.+. .++.++++++||||||.+++.
T Consensus 14 ~~ivllHG~~~~~~~w~~~~~~-L~~~~~vi~~Dl~G~G~S~~-~~~~~~~~~~~~l~-~~~~~~~~lvGhS~Gg~ia~~ 90 (256)
T PRK10349 14 VHLVLLHGWGLNAEVWRCIDEE-LSSHFTLHLVDLPGFGRSRG-FGALSLADMAEAVL-QQAPDKAIWLGWSLGGLVASQ 90 (256)
T ss_pred CeEEEECCCCCChhHHHHHHHH-HhcCCEEEEecCCCCCCCCC-CCCCCHHHHHHHHH-hcCCCCeEEEEECHHHHHHHH
Confidence 4699999999999999999998 977788 5554 22221 12346666666665 457799999999999999999
Q ss_pred HHhcChhhhhcccee
Q psy6856 188 MASMRPEYNRKINLQ 202 (370)
Q Consensus 188 ~a~~~p~~v~~l~~~ 202 (370)
+|.++|+++++++++
T Consensus 91 ~a~~~p~~v~~lili 105 (256)
T PRK10349 91 IALTHPERVQALVTV 105 (256)
T ss_pred HHHhChHhhheEEEe
Confidence 999999999999874
No 19
>KOG1454|consensus
Probab=99.66 E-value=1.1e-15 Score=143.79 Aligned_cols=101 Identities=28% Similarity=0.358 Sum_probs=77.4
Q ss_pred CCCCeEEEeCCCCCChhHhhhccccccCCc--ce-ecCC--C---CCCcccc-cCCH---HHHHHHHHHHcCCCCEEEEE
Q psy6856 110 ANSPPVLLQHGLCLASDSWILRGQEDLGNL--YK-LYPK--N---VNWHEHG-LYDV---PAMIDYILSVTRRPTLSYIG 177 (370)
Q Consensus 110 ~~~~~vlllHG~~~~~~~w~~~~~~~L~~~--~~-~~~~--~---~~~~~~~-~~D~---~~~i~~l~~~~~~~~~~lvG 177 (370)
..++|||++|||++|..+|+.+.+. |... +. ++.| + .+..+.+ .|++ ...+..++...+.++++++|
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~-L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvg 134 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPL-LSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVG 134 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhccc-cccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcceEEEE
Confidence 4789999999999999999999999 8544 66 5555 2 2332222 2444 44555556667778899999
Q ss_pred eChhHHHHHHHHhcChhhhhccceeeccccceee
Q psy6856 178 HSMGTTMFYVMASMRPEYNRKINLQISLAPVAYV 211 (370)
Q Consensus 178 hS~GG~va~~~a~~~p~~v~~l~~~~~~aP~~~~ 211 (370)
||+||.+|+.+|+.+|+.|++++++..++|..+.
T Consensus 135 hS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~ 168 (326)
T KOG1454|consen 135 HSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYS 168 (326)
T ss_pred eCcHHHHHHHHHHhCcccccceeeeccccccccc
Confidence 9999999999999999999999977656665554
No 20
>KOG4409|consensus
Probab=99.66 E-value=9.3e-16 Score=140.19 Aligned_cols=131 Identities=15% Similarity=0.175 Sum_probs=94.0
Q ss_pred HHHcCCcceEEEEECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhHhhhccccccCCcce---ecCC--------CCC
Q psy6856 80 LRKWGLSSETHRTKTQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDSWILRGQEDLGNLYK---LYPK--------NVN 148 (370)
Q Consensus 80 ~~~~~~~~e~~~v~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~~~~~L~~~~~---~~~~--------~~~ 148 (370)
.+....+++...+...++..+.......+...++|+||+||+|++.+.|..+.+. |...+. +|.- .++
T Consensus 58 l~~~~v~~~~~~v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~f~~Nf~~-La~~~~vyaiDllG~G~SSRP~F~ 136 (365)
T KOG4409|consen 58 LSSVPVPYSKKYVRIPNGIEIWTITVSNESANKTPLVLIHGYGAGLGLFFRNFDD-LAKIRNVYAIDLLGFGRSSRPKFS 136 (365)
T ss_pred hhhcCCCcceeeeecCCCceeEEEeecccccCCCcEEEEeccchhHHHHHHhhhh-hhhcCceEEecccCCCCCCCCCCC
Confidence 3444566667677776665554444433346789999999999999999999999 965554 3332 222
Q ss_pred Ccccc-cCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhccceeeccccceeecCC
Q psy6856 149 WHEHG-LYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQISLAPVAYVSRM 214 (370)
Q Consensus 149 ~~~~~-~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~aP~~~~~~~ 214 (370)
.+... ..-..+.|++.....|++|.+|+|||+||.+|..||.+||++|++|++ .+|.++....
T Consensus 137 ~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiL---vsP~Gf~~~~ 200 (365)
T KOG4409|consen 137 IDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLIL---VSPWGFPEKP 200 (365)
T ss_pred CCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEE---ecccccccCC
Confidence 22211 113445666778889999999999999999999999999999999865 5777765543
No 21
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.65 E-value=8.5e-16 Score=138.82 Aligned_cols=92 Identities=17% Similarity=0.221 Sum_probs=73.8
Q ss_pred CCCCeEEEeCCCCCChhHhhhccccccCCcce-ecCC----CCCC----cccccCCHHHHHHHHHHHcCCCCEEEEEeCh
Q psy6856 110 ANSPPVLLQHGLCLASDSWILRGQEDLGNLYK-LYPK----NVNW----HEHGLYDVPAMIDYILSVTRRPTLSYIGHSM 180 (370)
Q Consensus 110 ~~~~~vlllHG~~~~~~~w~~~~~~~L~~~~~-~~~~----~~~~----~~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~ 180 (370)
.++|+||++||++++...|....+. |.++|+ +.+| +.+. ......|..+++..+++.++.++++++||||
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~~-l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~G~S~ 89 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLDV-LTQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNIERFHFVGHAL 89 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHHH-HHhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCCcEEEEEech
Confidence 4578999999999999999998888 877888 5544 2221 1233346666777778888999999999999
Q ss_pred hHHHHHHHHhcChhhhhcccee
Q psy6856 181 GTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 181 GG~va~~~a~~~p~~v~~l~~~ 202 (370)
||.+++.+|.++|+.+++++++
T Consensus 90 Gg~~a~~~a~~~~~~v~~~i~~ 111 (257)
T TIGR03611 90 GGLIGLQLALRYPERLLSLVLI 111 (257)
T ss_pred hHHHHHHHHHHChHHhHHheee
Confidence 9999999999999988888764
No 22
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.65 E-value=1.2e-15 Score=144.58 Aligned_cols=125 Identities=12% Similarity=0.074 Sum_probs=81.8
Q ss_pred HHHHHHcCCcceEEEEECCCCcEEEEEEEc-CCC-CCCCeEEEeCCCCCChh-Hhhhcccccc-CCcce-ecCC----CC
Q psy6856 77 TELLRKWGLSSETHRTKTQDGYTLTMHRIV-PKY-ANSPPVLLQHGLCLASD-SWILRGQEDL-GNLYK-LYPK----NV 147 (370)
Q Consensus 77 ~~~~~~~~~~~e~~~v~t~dG~~l~~~~i~-~~~-~~~~~vlllHG~~~~~~-~w~~~~~~~L-~~~~~-~~~~----~~ 147 (370)
.++....+.+.++..+++.||..|.++... .+. +.+++|||+||++++.. .|...... | .+||+ +.+| +.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~-L~~~Gy~V~~~D~rGhG~ 100 (330)
T PLN02298 22 EEYYALKGIKGSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIF-LAQMGFACFALDLEGHGR 100 (330)
T ss_pred HHHhhccCCccccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHH-HHhCCCEEEEecCCCCCC
Confidence 345666778888888999999999875543 222 34567999999987643 44555555 6 56888 4444 22
Q ss_pred CCc--cc--cc----CCHHHHHHHHHHH--cCCCCEEEEEeChhHHHHHHHHhcChhhhhcccee
Q psy6856 148 NWH--EH--GL----YDVPAMIDYILSV--TRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 148 ~~~--~~--~~----~D~~~~i~~l~~~--~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
+.. .. .. .|+.++++.+... ....+++|+||||||++++.++.++|+++++++++
T Consensus 101 S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~ 165 (330)
T PLN02298 101 SEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLV 165 (330)
T ss_pred CCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEe
Confidence 211 11 11 1333344443322 12247999999999999999999999988887753
No 23
>PRK06489 hypothetical protein; Provisional
Probab=99.65 E-value=6.6e-16 Score=148.28 Aligned_cols=91 Identities=16% Similarity=0.161 Sum_probs=64.3
Q ss_pred CCeEEEeCCCCCChhHhh--hcccc-------ccCCcce-ecCC----CCCCc----------ccccCCHHHHHHH-HHH
Q psy6856 112 SPPVLLQHGLCLASDSWI--LRGQE-------DLGNLYK-LYPK----NVNWH----------EHGLYDVPAMIDY-ILS 166 (370)
Q Consensus 112 ~~~vlllHG~~~~~~~w~--~~~~~-------~L~~~~~-~~~~----~~~~~----------~~~~~D~~~~i~~-l~~ 166 (370)
+|||||+||++++...|. ...+. .+.++|+ +.+| +.+.. .+...++.+++.. +++
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~ 148 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE 148 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH
Confidence 789999999999998886 33222 0256788 5555 22211 1122233333333 457
Q ss_pred HcCCCCEE-EEEeChhHHHHHHHHhcChhhhhcccee
Q psy6856 167 VTRRPTLS-YIGHSMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 167 ~~~~~~~~-lvGhS~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
.+++++++ ++||||||.+|+.+|.++|+++++++++
T Consensus 149 ~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi 185 (360)
T PRK06489 149 GLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPM 185 (360)
T ss_pred hcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeee
Confidence 78999986 8999999999999999999999999874
No 24
>PLN02965 Probable pheophorbidase
Probab=99.64 E-value=6e-16 Score=141.31 Aligned_cols=89 Identities=12% Similarity=0.054 Sum_probs=71.5
Q ss_pred eEEEeCCCCCChhHhhhcccccc-CCcce-ecCC----CCCCc----ccccCCHHHHHHHHHHHcCC-CCEEEEEeChhH
Q psy6856 114 PVLLQHGLCLASDSWILRGQEDL-GNLYK-LYPK----NVNWH----EHGLYDVPAMIDYILSVTRR-PTLSYIGHSMGT 182 (370)
Q Consensus 114 ~vlllHG~~~~~~~w~~~~~~~L-~~~~~-~~~~----~~~~~----~~~~~D~~~~i~~l~~~~~~-~~~~lvGhS~GG 182 (370)
+|||+||++.+...|..+++. | ..+|+ +.+| +.+.. .....++.+++..+++.++. ++++++||||||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~-L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG 83 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATL-LDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGG 83 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHH-HhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcch
Confidence 599999999999999999999 9 77898 5555 22221 12333566678888899887 499999999999
Q ss_pred HHHHHHHhcChhhhhccceee
Q psy6856 183 TMFYVMASMRPEYNRKINLQI 203 (370)
Q Consensus 183 ~va~~~a~~~p~~v~~l~~~~ 203 (370)
.+++.+|.++|+++.+++++.
T Consensus 84 ~ia~~~a~~~p~~v~~lvl~~ 104 (255)
T PLN02965 84 GSVTEALCKFTDKISMAIYVA 104 (255)
T ss_pred HHHHHHHHhCchheeEEEEEc
Confidence 999999999999999887643
No 25
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.64 E-value=4.5e-15 Score=142.73 Aligned_cols=117 Identities=18% Similarity=0.204 Sum_probs=90.8
Q ss_pred cCCcceEEEEECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhHhhhccccccCCcce-ecCC----CCCCc-------
Q psy6856 83 WGLSSETHRTKTQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDSWILRGQEDLGNLYK-LYPK----NVNWH------- 150 (370)
Q Consensus 83 ~~~~~e~~~v~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~~~~~L~~~~~-~~~~----~~~~~------- 150 (370)
+|++.......+.||+++.+ ...|.+++++|||+||++++...|..+.+. |..+|+ +.+| +.+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~y--~~~G~~~~~~ivllHG~~~~~~~w~~~~~~-L~~~~~Via~DlpG~G~S~~p~~~~~~ 176 (383)
T PLN03084 100 FGLKMGAQSQASSDLFRWFC--VESGSNNNPPVLLIHGFPSQAYSYRKVLPV-LSKNYHAIAFDWLGFGFSDKPQPGYGF 176 (383)
T ss_pred ccccccceeEEcCCceEEEE--EecCCCCCCeEEEECCCCCCHHHHHHHHHH-HhcCCEEEEECCCCCCCCCCCcccccc
Confidence 45555555566788876643 444555678999999999999999999998 977888 6665 22221
Q ss_pred ccccCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhcccee
Q psy6856 151 EHGLYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 151 ~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
++...++.+++..+++++++++++++|||+||++++.+|.++|+++++++++
T Consensus 177 ~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi 228 (383)
T PLN03084 177 NYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILL 228 (383)
T ss_pred cCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEE
Confidence 1233456777888899999999999999999999999999999999998864
No 26
>PRK10749 lysophospholipase L2; Provisional
Probab=99.63 E-value=1.4e-15 Score=144.28 Aligned_cols=113 Identities=14% Similarity=0.102 Sum_probs=80.6
Q ss_pred ceEEEEECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhHhhhcccccc-CCcce-ecCC----CCCCc---c------
Q psy6856 87 SETHRTKTQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDSWILRGQEDL-GNLYK-LYPK----NVNWH---E------ 151 (370)
Q Consensus 87 ~e~~~v~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~~~~~L-~~~~~-~~~~----~~~~~---~------ 151 (370)
.|+..+...||..+.++....+ ..+++||++||++++...|...+.. | .++|+ +.+| +.+.. .
T Consensus 30 ~~~~~~~~~~g~~l~~~~~~~~-~~~~~vll~HG~~~~~~~y~~~~~~-l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~ 107 (330)
T PRK10749 30 REEAEFTGVDDIPIRFVRFRAP-HHDRVVVICPGRIESYVKYAELAYD-LFHLGYDVLIIDHRGQGRSGRLLDDPHRGHV 107 (330)
T ss_pred ccceEEEcCCCCEEEEEEccCC-CCCcEEEEECCccchHHHHHHHHHH-HHHCCCeEEEEcCCCCCCCCCCCCCCCcCcc
Confidence 3566777889988877665432 4567899999999999999988877 6 67888 4444 22211 0
Q ss_pred cccCCHHHHHHHHHHHc----CCCCEEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 152 HGLYDVPAMIDYILSVT----RRPTLSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 152 ~~~~D~~~~i~~l~~~~----~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
....++.+++..+++.+ +..+++++||||||.+++.+|.++|+.++++++
T Consensus 108 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl 161 (330)
T PRK10749 108 ERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIAL 161 (330)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEE
Confidence 11123344444444443 668999999999999999999999998888765
No 27
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.62 E-value=1.9e-15 Score=135.40 Aligned_cols=91 Identities=16% Similarity=0.172 Sum_probs=73.0
Q ss_pred CCCeEEEeCCCCCChhHhhhccccccCCcce-ecCC----CCCC---cccccCCHHHHHHHHHHHcCCCCEEEEEeChhH
Q psy6856 111 NSPPVLLQHGLCLASDSWILRGQEDLGNLYK-LYPK----NVNW---HEHGLYDVPAMIDYILSVTRRPTLSYIGHSMGT 182 (370)
Q Consensus 111 ~~~~vlllHG~~~~~~~w~~~~~~~L~~~~~-~~~~----~~~~---~~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG 182 (370)
.+|++|++||++.+...|....+. |.++|+ +.+| +.+. ......++.+++..+++.++.++++++||||||
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~-l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~v~liG~S~Gg 90 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPA-LTPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLGIERAVFCGLSLGG 90 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHH-hhcccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCceEEEEeCchH
Confidence 568899999999999999999888 888888 5544 2221 122333566677778888888999999999999
Q ss_pred HHHHHHHhcChhhhhcccee
Q psy6856 183 TMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 183 ~va~~~a~~~p~~v~~l~~~ 202 (370)
.+++.+|.++|+.+++++++
T Consensus 91 ~~a~~~a~~~p~~v~~li~~ 110 (251)
T TIGR02427 91 LIAQGLAARRPDRVRALVLS 110 (251)
T ss_pred HHHHHHHHHCHHHhHHHhhc
Confidence 99999999999999988753
No 28
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.61 E-value=4.4e-15 Score=132.71 Aligned_cols=89 Identities=15% Similarity=0.226 Sum_probs=70.6
Q ss_pred CCeEEEeCCCCCChhHhhhccccccCCcce-ecCC--CCCCc-ccccCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHH
Q psy6856 112 SPPVLLQHGLCLASDSWILRGQEDLGNLYK-LYPK--NVNWH-EHGLYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYV 187 (370)
Q Consensus 112 ~~~vlllHG~~~~~~~w~~~~~~~L~~~~~-~~~~--~~~~~-~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~ 187 (370)
.++|||+||++++...|..+.+. |.++|+ +.+| ++... ....+++.+.++.+.+... ++++++||||||.+++.
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~-l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~-~~~~lvG~S~Gg~~a~~ 81 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEE-LSAHFTLHLVDLPGHGRSRGFGPLSLADAAEAIAAQAP-DPAIWLGWSLGGLVALH 81 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHh-hccCeEEEEecCCcCccCCCCCCcCHHHHHHHHHHhCC-CCeEEEEEcHHHHHHHH
Confidence 37899999999999999999998 977888 5554 22211 1223477777777766654 79999999999999999
Q ss_pred HHhcChhhhhcccee
Q psy6856 188 MASMRPEYNRKINLQ 202 (370)
Q Consensus 188 ~a~~~p~~v~~l~~~ 202 (370)
+|.++|+++.+++++
T Consensus 82 ~a~~~p~~v~~~il~ 96 (245)
T TIGR01738 82 IAATHPDRVRALVTV 96 (245)
T ss_pred HHHHCHHhhheeeEe
Confidence 999999999998864
No 29
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.61 E-value=2.9e-15 Score=144.03 Aligned_cols=98 Identities=18% Similarity=0.257 Sum_probs=75.7
Q ss_pred EEEcCCCCCCCeEEEeCCCCCChhHhhhccccccCCcce-ecCC----CCCC---cccccCCHHHHHHHHHHHcCCCCEE
Q psy6856 103 HRIVPKYANSPPVLLQHGLCLASDSWILRGQEDLGNLYK-LYPK----NVNW---HEHGLYDVPAMIDYILSVTRRPTLS 174 (370)
Q Consensus 103 ~~i~~~~~~~~~vlllHG~~~~~~~w~~~~~~~L~~~~~-~~~~----~~~~---~~~~~~D~~~~i~~l~~~~~~~~~~ 174 (370)
++...+.+++++|||+||++++...|...... |..+|+ +.+| +.+. ......++.+.+..+++.++.++++
T Consensus 122 ~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~-l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (371)
T PRK14875 122 RYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAA-LAAGRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDALGIERAH 200 (371)
T ss_pred EEecccCCCCCeEEEECCCCCccchHHHHHHH-HhcCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCccEE
Confidence 33444445678999999999999999999998 877788 5544 2221 1222335666777778889989999
Q ss_pred EEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 175 YIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 175 lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
++|||+||.+++.+|.++|+++.++++
T Consensus 201 lvG~S~Gg~~a~~~a~~~~~~v~~lv~ 227 (371)
T PRK14875 201 LVGHSMGGAVALRLAARAPQRVASLTL 227 (371)
T ss_pred EEeechHHHHHHHHHHhCchheeEEEE
Confidence 999999999999999999988888765
No 30
>PRK13604 luxD acyl transferase; Provisional
Probab=99.61 E-value=4.2e-15 Score=136.78 Aligned_cols=119 Identities=14% Similarity=0.188 Sum_probs=87.1
Q ss_pred CcceEEEEECCCCcEEEEEEEcCC---CCCCCeEEEeCCCCCChhHhhhcccccc-CCcce---ecCC-C--CCCc----
Q psy6856 85 LSSETHRTKTQDGYTLTMHRIVPK---YANSPPVLLQHGLCLASDSWILRGQEDL-GNLYK---LYPK-N--VNWH---- 150 (370)
Q Consensus 85 ~~~e~~~v~t~dG~~l~~~~i~~~---~~~~~~vlllHG~~~~~~~w~~~~~~~L-~~~~~---~~~~-~--~~~~---- 150 (370)
+..++|.+.++||..|..|.+++. ..+.++||++||++++...+...+.. | .+||. +|.+ . -|..
T Consensus 7 ~~~~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~-La~~G~~vLrfD~rg~~GeS~G~~~~ 85 (307)
T PRK13604 7 FKTIDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEY-LSSNGFHVIRYDSLHHVGLSSGTIDE 85 (307)
T ss_pred ccchhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHH-HHHCCCEEEEecCCCCCCCCCCcccc
Confidence 345678899999999999998864 23457899999999998778888887 7 77888 5533 1 1111
Q ss_pred ---ccccCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhccceeecccccee
Q psy6856 151 ---EHGLYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQISLAPVAY 210 (370)
Q Consensus 151 ---~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~aP~~~ 210 (370)
....+|+.++++++.+. +.+++.|+||||||++|+..|.+.+ ++. +++.+|...
T Consensus 86 ~t~s~g~~Dl~aaid~lk~~-~~~~I~LiG~SmGgava~~~A~~~~--v~~---lI~~sp~~~ 142 (307)
T PRK13604 86 FTMSIGKNSLLTVVDWLNTR-GINNLGLIAASLSARIAYEVINEID--LSF---LITAVGVVN 142 (307)
T ss_pred CcccccHHHHHHHHHHHHhc-CCCceEEEEECHHHHHHHHHhcCCC--CCE---EEEcCCccc
Confidence 12345899999998664 6689999999999999977776533 333 355666543
No 31
>PRK07581 hypothetical protein; Validated
Probab=99.60 E-value=1.3e-14 Score=138.19 Aligned_cols=92 Identities=12% Similarity=0.061 Sum_probs=63.6
Q ss_pred CCCeEEEeCCCCCChhHhhhcc---cccc-CCcce-ecCC----CCCC--c----cccc-----CCHHHHHHH----HHH
Q psy6856 111 NSPPVLLQHGLCLASDSWILRG---QEDL-GNLYK-LYPK----NVNW--H----EHGL-----YDVPAMIDY----ILS 166 (370)
Q Consensus 111 ~~~~vlllHG~~~~~~~w~~~~---~~~L-~~~~~-~~~~----~~~~--~----~~~~-----~D~~~~i~~----l~~ 166 (370)
..++||++||++++...|..+. +. | .++|+ +.+| +.+. . ++.. +.+.+++.. +++
T Consensus 40 ~~~~vll~~~~~~~~~~~~~~~~~~~~-l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 118 (339)
T PRK07581 40 KDNAILYPTWYSGTHQDNEWLIGPGRA-LDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTE 118 (339)
T ss_pred CCCEEEEeCCCCCCcccchhhccCCCc-cCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHH
Confidence 3456777788887777775443 35 6 46788 6665 2121 1 1111 124444443 778
Q ss_pred HcCCCC-EEEEEeChhHHHHHHHHhcChhhhhccceee
Q psy6856 167 VTRRPT-LSYIGHSMGTTMFYVMASMRPEYNRKINLQI 203 (370)
Q Consensus 167 ~~~~~~-~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~ 203 (370)
.+|+++ ++||||||||.+|+.+|.+||++|++++++.
T Consensus 119 ~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~ 156 (339)
T PRK07581 119 KFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIA 156 (339)
T ss_pred HhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeee
Confidence 899999 4799999999999999999999999999753
No 32
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.59 E-value=5.9e-15 Score=136.24 Aligned_cols=92 Identities=16% Similarity=0.123 Sum_probs=70.4
Q ss_pred CCCCeEEEeCCCCCChhHhhhcccccc-CCcce-ecCC--CC--CCcc----cccCCHHHHHHHHHHHcC-CCCEEEEEe
Q psy6856 110 ANSPPVLLQHGLCLASDSWILRGQEDL-GNLYK-LYPK--NV--NWHE----HGLYDVPAMIDYILSVTR-RPTLSYIGH 178 (370)
Q Consensus 110 ~~~~~vlllHG~~~~~~~w~~~~~~~L-~~~~~-~~~~--~~--~~~~----~~~~D~~~~i~~l~~~~~-~~~~~lvGh 178 (370)
+++|+|||+||++.+...|..+... | ..+|+ +.+| +. +... ....+..+.+..+++.++ .+++++|||
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~~~-L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGh 94 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIRCL-MENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPENEKVILVGH 94 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHHHH-HHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCCCCCEEEEEE
Confidence 5678999999999999999999988 8 46888 5555 22 1111 222344455666667764 589999999
Q ss_pred ChhHHHHHHHHhcChhhhhcccee
Q psy6856 179 SMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 179 S~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
||||.++..++.++|+++++++++
T Consensus 95 S~GG~v~~~~a~~~p~~v~~lv~~ 118 (273)
T PLN02211 95 SAGGLSVTQAIHRFPKKICLAVYV 118 (273)
T ss_pred CchHHHHHHHHHhChhheeEEEEe
Confidence 999999999999999998888764
No 33
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.59 E-value=3.4e-15 Score=144.25 Aligned_cols=109 Identities=17% Similarity=0.087 Sum_probs=78.2
Q ss_pred ECCCCcEEE---EEEEcCCC---CCCCeEEEeCCCCCChhH-------------hhhccc---ccc-CCcce-ecCC--C
Q psy6856 93 KTQDGYTLT---MHRIVPKY---ANSPPVLLQHGLCLASDS-------------WILRGQ---EDL-GNLYK-LYPK--N 146 (370)
Q Consensus 93 ~t~dG~~l~---~~~i~~~~---~~~~~vlllHG~~~~~~~-------------w~~~~~---~~L-~~~~~-~~~~--~ 146 (370)
++++|..+. +++...|. +.+|+|||+||++++... |..++. . | .++|+ +.+| +
T Consensus 23 ~~~~g~~~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~-l~~~~~~vi~~Dl~G 101 (379)
T PRK00175 23 PLESGAVLPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKP-IDTDRYFVICSNVLG 101 (379)
T ss_pred eccCCCCcCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCc-cCccceEEEeccCCC
Confidence 445555543 33333342 236899999999999985 666652 2 3 66787 5555 2
Q ss_pred --C-C--Cc---------------ccccCCHHHHHHHHHHHcCCCC-EEEEEeChhHHHHHHHHhcChhhhhcccee
Q psy6856 147 --V-N--WH---------------EHGLYDVPAMIDYILSVTRRPT-LSYIGHSMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 147 --~-~--~~---------------~~~~~D~~~~i~~l~~~~~~~~-~~lvGhS~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
. + .. .+...|+.+++..+++.+++++ ++++||||||.+++.+|.++|+++++++++
T Consensus 102 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~ 178 (379)
T PRK00175 102 GCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVI 178 (379)
T ss_pred CCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEE
Confidence 1 1 10 2344477788888999999999 599999999999999999999999999875
No 34
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.57 E-value=9.9e-15 Score=139.64 Aligned_cols=107 Identities=17% Similarity=0.066 Sum_probs=76.2
Q ss_pred CCCcEEEEEEEcCC-CCCCCeEEEeCCCCCChh-----------Hhhhccc---ccc-CCcce-ecCC--C--C--CC--
Q psy6856 95 QDGYTLTMHRIVPK-YANSPPVLLQHGLCLASD-----------SWILRGQ---EDL-GNLYK-LYPK--N--V--NW-- 149 (370)
Q Consensus 95 ~dG~~l~~~~i~~~-~~~~~~vlllHG~~~~~~-----------~w~~~~~---~~L-~~~~~-~~~~--~--~--~~-- 149 (370)
-+|..+.+...... ...+++|||+||++++.. .|..++. . | .++|+ +.+| + . +.
T Consensus 13 ~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~-l~~~~~~vi~~D~~G~~~g~s~~~ 91 (351)
T TIGR01392 13 LSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRA-IDTDRYFVVCSNVLGGCYGSTGPS 91 (351)
T ss_pred cCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCC-cCCCceEEEEecCCCCCCCCCCCC
Confidence 34544444333211 134679999999999874 3777652 3 3 67788 5555 3 1 11
Q ss_pred -------------cccccCCHHHHHHHHHHHcCCCC-EEEEEeChhHHHHHHHHhcChhhhhcccee
Q psy6856 150 -------------HEHGLYDVPAMIDYILSVTRRPT-LSYIGHSMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 150 -------------~~~~~~D~~~~i~~l~~~~~~~~-~~lvGhS~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
..+...|+.+++..+++.++.++ ++++||||||++++.+|.++|+++++++++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~ 158 (351)
T TIGR01392 92 SINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVL 158 (351)
T ss_pred CCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEE
Confidence 01334477788888899999999 999999999999999999999999999874
No 35
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.56 E-value=1.7e-14 Score=134.35 Aligned_cols=121 Identities=17% Similarity=0.159 Sum_probs=86.8
Q ss_pred eEEEEECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhHhhhcccccc-CCcce---ecCC--CCCC-cccc--c--CC
Q psy6856 88 ETHRTKTQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDSWILRGQEDL-GNLYK---LYPK--NVNW-HEHG--L--YD 156 (370)
Q Consensus 88 e~~~v~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~~~~~L-~~~~~---~~~~--~~~~-~~~~--~--~D 156 (370)
.+....+.||..+.++......+...+||++||+++++..|..++.. | .+||. +|.+ +.+. .+.+ . .|
T Consensus 10 ~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~-l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~ 88 (298)
T COG2267 10 TEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADD-LAARGFDVYALDLRGHGRSPRGQRGHVDSFAD 88 (298)
T ss_pred ccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHH-HHhCCCEEEEecCCCCCCCCCCCcCCchhHHH
Confidence 45667889999998888775544448999999999999999999998 7 88999 4444 3332 1111 1 13
Q ss_pred HHHHHHHHHHH----cCCCCEEEEEeChhHHHHHHHHhcChhhhhccceeeccccceeec
Q psy6856 157 VPAMIDYILSV----TRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQISLAPVAYVS 212 (370)
Q Consensus 157 ~~~~i~~l~~~----~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~aP~~~~~ 212 (370)
+..+++.+++. ....+++++||||||.|++.++.+++..++++ ++++|.....
T Consensus 89 ~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~---vLssP~~~l~ 145 (298)
T COG2267 89 YVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGL---VLSSPALGLG 145 (298)
T ss_pred HHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEE---EEECccccCC
Confidence 33344444433 24579999999999999999999999666655 5667776543
No 36
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.56 E-value=2.7e-14 Score=134.03 Aligned_cols=111 Identities=17% Similarity=0.143 Sum_probs=80.3
Q ss_pred eEEEEECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhHhhhcccccc-CCcce-ecCC----CCCCc-----ccccCC
Q psy6856 88 ETHRTKTQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDSWILRGQEDL-GNLYK-LYPK----NVNWH-----EHGLYD 156 (370)
Q Consensus 88 e~~~v~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~~~~~L-~~~~~-~~~~----~~~~~-----~~~~~D 156 (370)
++.++...||..+.+.. .|.++++||||+||++++...|. .... + ..+|+ +.+| +.+.. .....|
T Consensus 5 ~~~~~~~~~~~~l~y~~--~g~~~~~~lvllHG~~~~~~~~~-~~~~-~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 80 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQ--SGNPDGKPVVFLHGGPGSGTDPG-CRRF-FDPETYRIVLFDQRGCGKSTPHACLEENTTWD 80 (306)
T ss_pred cCCeEEcCCCcEEEEEE--CcCCCCCEEEEECCCCCCCCCHH-HHhc-cCccCCEEEEECCCCCCCCCCCCCcccCCHHH
Confidence 45677788887776544 34445789999999888766542 2223 3 35677 4444 22211 122336
Q ss_pred HHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhcccee
Q psy6856 157 VPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 157 ~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
+.+++..+++.++.++++++||||||.+++.+|.++|+++++++++
T Consensus 81 ~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~ 126 (306)
T TIGR01249 81 LVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLR 126 (306)
T ss_pred HHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheee
Confidence 7888888899999999999999999999999999999999988864
No 37
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.55 E-value=4.5e-14 Score=129.45 Aligned_cols=109 Identities=14% Similarity=0.020 Sum_probs=74.3
Q ss_pred ECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhHhhhccccccCC-cce-ecCC----CCCCcc------cccCCHHHH
Q psy6856 93 KTQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDSWILRGQEDLGN-LYK-LYPK----NVNWHE------HGLYDVPAM 160 (370)
Q Consensus 93 ~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~~~~~L~~-~~~-~~~~----~~~~~~------~~~~D~~~~ 160 (370)
.+.||..+.+.... +.+.+++||++||+++++..|.......+.+ +|+ +.+| +.+... ....++.++
T Consensus 7 ~~~~~~~~~~~~~~-~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~ 85 (288)
T TIGR01250 7 ITVDGGYHLFTKTG-GEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDE 85 (288)
T ss_pred ecCCCCeEEEEecc-CCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHH
Confidence 34445444443332 2234789999999877776655444441444 788 5444 222111 223356677
Q ss_pred HHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhcccee
Q psy6856 161 IDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 161 i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
+..+++.++.++++++||||||.+++.+|.++|+++++++++
T Consensus 86 ~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~ 127 (288)
T TIGR01250 86 LEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIIS 127 (288)
T ss_pred HHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEe
Confidence 778888999999999999999999999999999998888764
No 38
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.55 E-value=3.6e-14 Score=135.38 Aligned_cols=103 Identities=18% Similarity=0.168 Sum_probs=73.7
Q ss_pred CCcEEEEEEEcCCCCCCCeEEEeCCCCCChh------------Hhhhccc---ccc-CCcce-ecCC--CC--CC-cccc
Q psy6856 96 DGYTLTMHRIVPKYANSPPVLLQHGLCLASD------------SWILRGQ---EDL-GNLYK-LYPK--NV--NW-HEHG 153 (370)
Q Consensus 96 dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~------------~w~~~~~---~~L-~~~~~-~~~~--~~--~~-~~~~ 153 (370)
+|..+.+.. .|. .++|+||+||+.++.. .|..+.. . | ..+|+ +.+| +. +. ..+.
T Consensus 44 ~~~~l~y~~--~G~-~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~-L~~~~~~Vi~~Dl~G~g~s~~~~~~ 119 (343)
T PRK08775 44 EDLRLRYEL--IGP-AGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRA-LDPARFRLLAFDFIGADGSLDVPID 119 (343)
T ss_pred CCceEEEEE--ecc-CCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCc-cCccccEEEEEeCCCCCCCCCCCCC
Confidence 566665443 232 3456777777776665 5888875 5 6 46788 5555 22 11 1223
Q ss_pred cCCHHHHHHHHHHHcCCCCE-EEEEeChhHHHHHHHHhcChhhhhcccee
Q psy6856 154 LYDVPAMIDYILSVTRRPTL-SYIGHSMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 154 ~~D~~~~i~~l~~~~~~~~~-~lvGhS~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
..|.++++..+++.++++++ +++||||||.+|+.+|.++|+++++++++
T Consensus 120 ~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi 169 (343)
T PRK08775 120 TADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVV 169 (343)
T ss_pred HHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEE
Confidence 34677888888999999775 79999999999999999999999999874
No 39
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.55 E-value=2.5e-13 Score=132.36 Aligned_cols=122 Identities=15% Similarity=0.091 Sum_probs=81.6
Q ss_pred HHHHcCCcceEEEEECCCCcEEEEEE-EcCCCCCCCeEEEeCCCCCCh-hHhhhcccccc-CCcce-ecCC----CCCCc
Q psy6856 79 LLRKWGLSSETHRTKTQDGYTLTMHR-IVPKYANSPPVLLQHGLCLAS-DSWILRGQEDL-GNLYK-LYPK----NVNWH 150 (370)
Q Consensus 79 ~~~~~~~~~e~~~v~t~dG~~l~~~~-i~~~~~~~~~vlllHG~~~~~-~~w~~~~~~~L-~~~~~-~~~~----~~~~~ 150 (370)
.....+++.|++.+.+.||..|..+. .|.+.++.|+||++||+.+.. ..|....+. | .+||. +.+| +.+..
T Consensus 160 a~~~~~~~~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~-La~~Gy~vl~~D~pG~G~s~~ 238 (414)
T PRK05077 160 AAKRLPGELKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDY-LAPRGIAMLTIDMPSVGFSSK 238 (414)
T ss_pred HHhhcCCceEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHH-HHhCCCEEEEECCCCCCCCCC
Confidence 34456778999999999997787654 454434556677666766653 568777776 6 67898 5554 22211
Q ss_pred ccccCCHH----HHHHHHHHH--cCCCCEEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 151 EHGLYDVP----AMIDYILSV--TRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 151 ~~~~~D~~----~~i~~l~~~--~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
.....|.. +.++++.+. .+.+++.++||||||.+++.+|..+|++++++++
T Consensus 239 ~~~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~ 295 (414)
T PRK05077 239 WKLTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVAC 295 (414)
T ss_pred CCccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEE
Confidence 11112332 344444333 2568999999999999999999999987777654
No 40
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.55 E-value=6.6e-14 Score=135.41 Aligned_cols=122 Identities=18% Similarity=0.126 Sum_probs=77.1
Q ss_pred ceEEEEECCCCcEEEEEEEcC-CCCCCCeEEEeCCCCCChhHhhhcccccc-CCcce-ecCC----CCCCccc----c--
Q psy6856 87 SETHRTKTQDGYTLTMHRIVP-KYANSPPVLLQHGLCLASDSWILRGQEDL-GNLYK-LYPK----NVNWHEH----G-- 153 (370)
Q Consensus 87 ~e~~~v~t~dG~~l~~~~i~~-~~~~~~~vlllHG~~~~~~~w~~~~~~~L-~~~~~-~~~~----~~~~~~~----~-- 153 (370)
.++..+...||..+....... ....+++||++||++++...|...++. | .++|+ +.+| +.+.... .
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~-L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~ 188 (395)
T PLN02652 110 WATSLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQ-LTSCGFGVYAMDWIGHGGSDGLHGYVPSLD 188 (395)
T ss_pred EEEEEEECCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHH-HHHCCCEEEEeCCCCCCCCCCCCCCCcCHH
Confidence 445556777887776554433 234467899999999999999999988 8 67888 4444 2221111 1
Q ss_pred --cCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhccceeecccccee
Q psy6856 154 --LYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQISLAPVAY 210 (370)
Q Consensus 154 --~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~aP~~~ 210 (370)
..|+.+.++.+....+..+++++||||||.+++.++. +|+...++..+++.+|...
T Consensus 189 ~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~ 246 (395)
T PLN02652 189 YVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALR 246 (395)
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccc
Confidence 1234444444443344458999999999999997764 5653233444445566543
No 41
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.54 E-value=1.6e-14 Score=130.40 Aligned_cols=88 Identities=20% Similarity=0.230 Sum_probs=68.8
Q ss_pred CCeEEEeCCCCCChhHhhhccccccCCcce-ecCC--CC--CCcc--cccCCHHHHHHHHHHHcCCCCEEEEEeChhHHH
Q psy6856 112 SPPVLLQHGLCLASDSWILRGQEDLGNLYK-LYPK--NV--NWHE--HGLYDVPAMIDYILSVTRRPTLSYIGHSMGTTM 184 (370)
Q Consensus 112 ~~~vlllHG~~~~~~~w~~~~~~~L~~~~~-~~~~--~~--~~~~--~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~v 184 (370)
+|+|||+||++++...|..+.+. |. +|+ +.+| ++ +... ....++.+++..+++.++.++++++||||||.+
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~-l~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~v 79 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEA-LP-DYPRLYIDLPGHGGSAAISVDGFADVSRLLSQTLQSYNILPYWLVGYSLGGRI 79 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHH-cC-CCCEEEecCCCCCCCCCccccCHHHHHHHHHHHHHHcCCCCeEEEEECHHHHH
Confidence 57899999999999999999998 85 688 5555 22 2111 122245567777788889999999999999999
Q ss_pred HHHHHhcChhh-hhccce
Q psy6856 185 FYVMASMRPEY-NRKINL 201 (370)
Q Consensus 185 a~~~a~~~p~~-v~~l~~ 201 (370)
|+.+|.++|+. ++++++
T Consensus 80 a~~~a~~~~~~~v~~lvl 97 (242)
T PRK11126 80 AMYYACQGLAGGLCGLIV 97 (242)
T ss_pred HHHHHHhCCcccccEEEE
Confidence 99999999754 888765
No 42
>KOG1455|consensus
Probab=99.54 E-value=2.1e-14 Score=129.02 Aligned_cols=129 Identities=16% Similarity=0.109 Sum_probs=81.5
Q ss_pred HHHHcCCcceEEEEECCCCcEEEEEEE-cCC-CCCCCeEEEeCCCCCCh-hHhhhcccccc-CCcce---ecCC--CCCC
Q psy6856 79 LLRKWGLSSETHRTKTQDGYTLTMHRI-VPK-YANSPPVLLQHGLCLAS-DSWILRGQEDL-GNLYK---LYPK--NVNW 149 (370)
Q Consensus 79 ~~~~~~~~~e~~~v~t~dG~~l~~~~i-~~~-~~~~~~vlllHG~~~~~-~~w~~~~~~~L-~~~~~---~~~~--~~~~ 149 (370)
+....+....+-.+++.+|..|..... |.. ...+..|+++||+++.. ..+...+.. | +.||. +|.. +.+.
T Consensus 19 ~~~~~~~~~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~-l~~~g~~v~a~D~~GhG~Sd 97 (313)
T KOG1455|consen 19 YYGDGGVTYSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKR-LAKSGFAVYAIDYEGHGRSD 97 (313)
T ss_pred hcCCCccceeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHH-HHhCCCeEEEeeccCCCcCC
Confidence 344445556677788999987765443 422 24556799999999997 455556666 6 67887 4443 2221
Q ss_pred c--cc------ccCCHHHHHHHHHHH--cCCCCEEEEEeChhHHHHHHHHhcChhhhhccceeeccccceee
Q psy6856 150 H--EH------GLYDVPAMIDYILSV--TRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQISLAPVAYV 211 (370)
Q Consensus 150 ~--~~------~~~D~~~~i~~l~~~--~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~aP~~~~ 211 (370)
. .+ ...|....++.+..+ ..-.+.+++||||||+|++.++.++|+.-++++ ++||.+-.
T Consensus 98 Gl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~i---lvaPmc~i 166 (313)
T KOG1455|consen 98 GLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAI---LVAPMCKI 166 (313)
T ss_pred CCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccce---eeeccccc
Confidence 1 11 111333333332222 233589999999999999999999998777765 45666543
No 43
>PLN02511 hydrolase
Probab=99.54 E-value=5e-14 Score=136.39 Aligned_cols=111 Identities=15% Similarity=0.169 Sum_probs=77.6
Q ss_pred CcceEEEEECCCCcEEEEEEEcC----CCCCCCeEEEeCCCCCChhH-hh-hccccccCCcce---ecCCCC--CC----
Q psy6856 85 LSSETHRTKTQDGYTLTMHRIVP----KYANSPPVLLQHGLCLASDS-WI-LRGQEDLGNLYK---LYPKNV--NW---- 149 (370)
Q Consensus 85 ~~~e~~~v~t~dG~~l~~~~i~~----~~~~~~~vlllHG~~~~~~~-w~-~~~~~~L~~~~~---~~~~~~--~~---- 149 (370)
..++...+.|+||-.+.+.+... ....+|+||++||+++++.. |. ......+..+|+ ++.++. +.
T Consensus 69 ~~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~ 148 (388)
T PLN02511 69 VRYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTP 148 (388)
T ss_pred CceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCc
Confidence 45677789999999888755431 23457889999999887653 54 344431367888 444411 11
Q ss_pred ---cccccCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhh
Q psy6856 150 ---HEHGLYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEY 195 (370)
Q Consensus 150 ---~~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~ 195 (370)
......|+.++++++..+.+..+++++||||||.+++.++.++|+.
T Consensus 149 ~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~ 197 (388)
T PLN02511 149 QFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGEN 197 (388)
T ss_pred CEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCC
Confidence 1112337777777777666667999999999999999999999975
No 44
>PRK10985 putative hydrolase; Provisional
Probab=99.53 E-value=2.8e-14 Score=134.99 Aligned_cols=108 Identities=13% Similarity=0.103 Sum_probs=75.0
Q ss_pred cceEEEEECCCCcEEEEEEEcCC--CCCCCeEEEeCCCCCChhH-h-hhcccccc-CCcce---ecCCCC--CCc---c-
Q psy6856 86 SSETHRTKTQDGYTLTMHRIVPK--YANSPPVLLQHGLCLASDS-W-ILRGQEDL-GNLYK---LYPKNV--NWH---E- 151 (370)
Q Consensus 86 ~~e~~~v~t~dG~~l~~~~i~~~--~~~~~~vlllHG~~~~~~~-w-~~~~~~~L-~~~~~---~~~~~~--~~~---~- 151 (370)
+.+...++++||..+.+.+...+ .+.+|+||++||++++... | ...+.. | .+||+ ++.++. +.. +
T Consensus 30 ~~~~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~-l~~~G~~v~~~d~rG~g~~~~~~~~~ 108 (324)
T PRK10985 30 TPYWQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEA-AQKRGWLGVVMHFRGCSGEPNRLHRI 108 (324)
T ss_pred CcceeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHH-HHHCCCEEEEEeCCCCCCCccCCcce
Confidence 34456688999988776654322 2357899999999987543 3 345555 5 67888 444421 111 0
Q ss_pred ---cccCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChh
Q psy6856 152 ---HGLYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPE 194 (370)
Q Consensus 152 ---~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~ 194 (370)
....|+.+.++.+.++++..+++++||||||.++..+++++++
T Consensus 109 ~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~ 154 (324)
T PRK10985 109 YHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGD 154 (324)
T ss_pred ECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCC
Confidence 1134777788888888888899999999999999988887764
No 45
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.51 E-value=1.1e-13 Score=134.56 Aligned_cols=108 Identities=11% Similarity=0.116 Sum_probs=76.5
Q ss_pred EECCCCc--EEEEEEEcCCCCCCCeEEEeCCCCCChhHhhhccccccCCcce-ecCC----CCCCc-ccccC-------C
Q psy6856 92 TKTQDGY--TLTMHRIVPKYANSPPVLLQHGLCLASDSWILRGQEDLGNLYK-LYPK----NVNWH-EHGLY-------D 156 (370)
Q Consensus 92 v~t~dG~--~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~~~~~L~~~~~-~~~~----~~~~~-~~~~~-------D 156 (370)
+.+.||. .+....++ +.+++|+|||+||++++...|..+... |..+|+ +.+| +.+.. ..... .
T Consensus 84 ~~~~~~~~~~~~~~~~~-~~~~~p~vvllHG~~~~~~~~~~~~~~-L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~ 161 (402)
T PLN02894 84 FRSASNEPRFINTVTFD-SKEDAPTLVMVHGYGASQGFFFRNFDA-LASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAW 161 (402)
T ss_pred eecccCcCCeEEEEEec-CCCCCCEEEEECCCCcchhHHHHHHHH-HHhCCEEEEECCCCCCCCCCCCcccccHHHHHHH
Confidence 3344543 45544444 235679999999999999999988888 876788 4444 21111 11111 1
Q ss_pred HHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 157 VPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 157 ~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
+.+.+..+++.++.++++++||||||.+++.+|.++|+.++++++
T Consensus 162 ~~~~i~~~~~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl 206 (402)
T PLN02894 162 FIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLIL 206 (402)
T ss_pred HHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEE
Confidence 234455666778889999999999999999999999999988875
No 46
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.50 E-value=1.3e-14 Score=124.41 Aligned_cols=89 Identities=20% Similarity=0.187 Sum_probs=69.0
Q ss_pred CCCeEEEeCCCCCChhHhhhcccccc-CCcce-ecCC----CCCCcccccCCHHHHHHHHHH------HcCCCCEEEEEe
Q psy6856 111 NSPPVLLQHGLCLASDSWILRGQEDL-GNLYK-LYPK----NVNWHEHGLYDVPAMIDYILS------VTRRPTLSYIGH 178 (370)
Q Consensus 111 ~~~~vlllHG~~~~~~~w~~~~~~~L-~~~~~-~~~~----~~~~~~~~~~D~~~~i~~l~~------~~~~~~~~lvGh 178 (370)
.+..|||+||+.|+..+.+.+++. | .+||. .+|+ +-..+++......++++.+.+ ..|.+.|.++|-
T Consensus 14 G~~AVLllHGFTGt~~Dvr~Lgr~-L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~Gl 92 (243)
T COG1647 14 GNRAVLLLHGFTGTPRDVRMLGRY-LNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGL 92 (243)
T ss_pred CCEEEEEEeccCCCcHHHHHHHHH-HHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEee
Confidence 448999999999999999999999 8 77999 7776 333444444444455554433 347789999999
Q ss_pred ChhHHHHHHHHhcChhhhhcccee
Q psy6856 179 SMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 179 S~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
||||.+++.+|..+| +++|+.+
T Consensus 93 SmGGv~alkla~~~p--~K~iv~m 114 (243)
T COG1647 93 SMGGVFALKLAYHYP--PKKIVPM 114 (243)
T ss_pred cchhHHHHHHHhhCC--ccceeee
Confidence 999999999999998 5788753
No 47
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.49 E-value=1e-13 Score=123.85 Aligned_cols=89 Identities=21% Similarity=0.272 Sum_probs=68.2
Q ss_pred CCeEEEeCCCCCChhHhhhccccccCCcce-ecCC----CCCC--cccccCCHHH---H-HHHHHHHcCCCCEEEEEeCh
Q psy6856 112 SPPVLLQHGLCLASDSWILRGQEDLGNLYK-LYPK----NVNW--HEHGLYDVPA---M-IDYILSVTRRPTLSYIGHSM 180 (370)
Q Consensus 112 ~~~vlllHG~~~~~~~w~~~~~~~L~~~~~-~~~~----~~~~--~~~~~~D~~~---~-i~~l~~~~~~~~~~lvGhS~ 180 (370)
+|+|||+||++++...|..+.+. |.++|. +.+| +.+. .....+++.+ + +..+++.++.++++++|||+
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~-L~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 79 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIEL-LGPHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSM 79 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHH-hcccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEecc
Confidence 47899999999999999999998 887888 4444 2221 1112234433 4 55566778889999999999
Q ss_pred hHHHHHHHHhcChhhhhccce
Q psy6856 181 GTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 181 GG~va~~~a~~~p~~v~~l~~ 201 (370)
||.+++.+|.++|+.++++++
T Consensus 80 Gg~ia~~~a~~~~~~v~~lil 100 (251)
T TIGR03695 80 GGRIALYYALQYPERVQGLIL 100 (251)
T ss_pred HHHHHHHHHHhCchheeeeEE
Confidence 999999999999998888775
No 48
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=99.48 E-value=8.4e-14 Score=97.49 Aligned_cols=56 Identities=52% Similarity=0.898 Sum_probs=39.9
Q ss_pred HHHHHHHcCCcceEEEEECCCCcEEEEEEEcCCC------CCCCeEEEeCCCCCChhHhhhc
Q psy6856 76 NTELLRKWGLSSETHRTKTQDGYTLTMHRIVPKY------ANSPPVLLQHGLCLASDSWILR 131 (370)
Q Consensus 76 ~~~~~~~~~~~~e~~~v~t~dG~~l~~~~i~~~~------~~~~~vlllHG~~~~~~~w~~~ 131 (370)
++++++.+||++|+|.|+|+|||.|.++|||.+. ..+|||+|.||+.+|+..|..+
T Consensus 1 ~~~~i~~~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv~n 62 (63)
T PF04083_consen 1 VPELIEKHGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWVLN 62 (63)
T ss_dssp HHHHHHHTT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGCSS
T ss_pred CHHHHHHcCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHHcC
Confidence 3678999999999999999999999999999764 4689999999999999999765
No 49
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.47 E-value=2e-14 Score=126.51 Aligned_cols=86 Identities=21% Similarity=0.279 Sum_probs=68.8
Q ss_pred EEEeCCCCCChhHhhhccccccCCcce---ecCC--CCCCc-----ccccCCHHHHHHHHHHHcCCCCEEEEEeChhHHH
Q psy6856 115 VLLQHGLCLASDSWILRGQEDLGNLYK---LYPK--NVNWH-----EHGLYDVPAMIDYILSVTRRPTLSYIGHSMGTTM 184 (370)
Q Consensus 115 vlllHG~~~~~~~w~~~~~~~L~~~~~---~~~~--~~~~~-----~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~v 184 (370)
|||+||++++...|..+.+. |+++|+ ++.+ +.+.. .....+..+++..+++.++.++++++|||+||.+
T Consensus 1 vv~~hG~~~~~~~~~~~~~~-l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~ 79 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEA-LARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMI 79 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHH-HHTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHH-HhCCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccccc
Confidence 79999999999999999998 887888 4444 22221 2233356677888899999999999999999999
Q ss_pred HHHHHhcChhhhhccce
Q psy6856 185 FYVMASMRPEYNRKINL 201 (370)
Q Consensus 185 a~~~a~~~p~~v~~l~~ 201 (370)
++.+|.++|+.++++++
T Consensus 80 a~~~a~~~p~~v~~~vl 96 (228)
T PF12697_consen 80 ALRLAARYPDRVKGLVL 96 (228)
T ss_dssp HHHHHHHSGGGEEEEEE
T ss_pred cccccccccccccccee
Confidence 99999999998888765
No 50
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.47 E-value=3.5e-13 Score=128.94 Aligned_cols=108 Identities=14% Similarity=0.084 Sum_probs=74.3
Q ss_pred EECCCCcEEEEEEEcC-CCCCCCeEEEeCCCCCChhHh-----hhcccccc-CCcce---ecCC-------CCCCccccc
Q psy6856 92 TKTQDGYTLTMHRIVP-KYANSPPVLLQHGLCLASDSW-----ILRGQEDL-GNLYK---LYPK-------NVNWHEHGL 154 (370)
Q Consensus 92 v~t~dG~~l~~~~i~~-~~~~~~~vlllHG~~~~~~~w-----~~~~~~~L-~~~~~---~~~~-------~~~~~~~~~ 154 (370)
|-..++..|..+. |. +...++|||++||+..+...| ...++. | .+||+ +|.+ ..+.+++..
T Consensus 42 v~~~~~~~l~~~~-~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~-L~~~G~~V~~~D~~g~g~s~~~~~~~d~~~ 119 (350)
T TIGR01836 42 VYREDKVVLYRYT-PVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRG-LLERGQDVYLIDWGYPDRADRYLTLDDYIN 119 (350)
T ss_pred EEEcCcEEEEEec-CCCCcCCCCcEEEeccccccceeccCCCCchHHHH-HHHCCCeEEEEeCCCCCHHHhcCCHHHHHH
Confidence 3445554444332 32 123467899999987655544 344555 5 66888 4443 223334444
Q ss_pred CCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 155 YDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 155 ~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
.|+.++++++.+..+.++++++||||||.+++.+++++|+.++++++
T Consensus 120 ~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~ 166 (350)
T TIGR01836 120 GYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVT 166 (350)
T ss_pred HHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEE
Confidence 46788899999999999999999999999999999999987777664
No 51
>PRK05855 short chain dehydrogenase; Validated
Probab=99.47 E-value=4.4e-13 Score=136.42 Aligned_cols=108 Identities=14% Similarity=0.196 Sum_probs=77.9
Q ss_pred EEEECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhHhhhccccccCCcce-ecCC----CCCC--c---ccccCCHHH
Q psy6856 90 HRTKTQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDSWILRGQEDLGNLYK-LYPK----NVNW--H---EHGLYDVPA 159 (370)
Q Consensus 90 ~~v~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~~~~~L~~~~~-~~~~----~~~~--~---~~~~~D~~~ 159 (370)
..+.+.||..+.++.. +++++|+|||+||++++...|....+. |..+|+ +.+| +.+. . .+...++.+
T Consensus 5 ~~~~~~~g~~l~~~~~--g~~~~~~ivllHG~~~~~~~w~~~~~~-L~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~ 81 (582)
T PRK05855 5 RTVVSSDGVRLAVYEW--GDPDRPTVVLVHGYPDNHEVWDGVAPL-LADRFRVVAYDVRGAGRSSAPKRTAAYTLARLAD 81 (582)
T ss_pred EEEEeeCCEEEEEEEc--CCCCCCeEEEEcCCCchHHHHHHHHHH-hhcceEEEEecCCCCCCCCCCCcccccCHHHHHH
Confidence 3445678877766543 445678999999999999999999998 887888 5544 2221 1 123346667
Q ss_pred HHHHHHHHcCCCC-EEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 160 MIDYILSVTRRPT-LSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 160 ~i~~l~~~~~~~~-~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
++..+++.++.++ ++++||||||.+++.++.+ ++...+++.
T Consensus 82 dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~-~~~~~~v~~ 123 (582)
T PRK05855 82 DFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTR-PRAAGRIAS 123 (582)
T ss_pred HHHHHHHHhCCCCcEEEEecChHHHHHHHHHhC-ccchhhhhh
Confidence 7777788888765 9999999999999988876 444444443
No 52
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.43 E-value=5.4e-13 Score=149.01 Aligned_cols=107 Identities=15% Similarity=0.173 Sum_probs=78.7
Q ss_pred CCCcEEEEEEEcCCC-CCCCeEEEeCCCCCChhHhhhccccccCCcce-ecCC--CC--CC-c----------ccccCCH
Q psy6856 95 QDGYTLTMHRIVPKY-ANSPPVLLQHGLCLASDSWILRGQEDLGNLYK-LYPK--NV--NW-H----------EHGLYDV 157 (370)
Q Consensus 95 ~dG~~l~~~~i~~~~-~~~~~vlllHG~~~~~~~w~~~~~~~L~~~~~-~~~~--~~--~~-~----------~~~~~D~ 157 (370)
.||....+++...|. +.+++|||+||++++...|..+... |..+|+ +.+| ++ +. . .....++
T Consensus 1353 ~~~~~~~i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~-L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~ 1431 (1655)
T PLN02980 1353 VDGFSCLIKVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKA-ISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELV 1431 (1655)
T ss_pred cCceEEEEEEEecCCCCCCCeEEEECCCCCCHHHHHHHHHH-HhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHH
Confidence 345433333334342 3468999999999999999999988 877788 5444 21 11 0 1122345
Q ss_pred HHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhcccee
Q psy6856 158 PAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 158 ~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
.+++..+++.++.++++++||||||.+++.+|.++|+++++++++
T Consensus 1432 a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVli 1476 (1655)
T PLN02980 1432 ADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVII 1476 (1655)
T ss_pred HHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEE
Confidence 666777788889999999999999999999999999999998764
No 53
>PRK11071 esterase YqiA; Provisional
Probab=99.40 E-value=1.8e-12 Score=113.06 Aligned_cols=74 Identities=15% Similarity=0.152 Sum_probs=60.0
Q ss_pred CeEEEeCCCCCChhHhhhc--ccccc---CCcce-ecCC--CCCCcccccCCHHHHHHHHHHHcCCCCEEEEEeChhHHH
Q psy6856 113 PPVLLQHGLCLASDSWILR--GQEDL---GNLYK-LYPK--NVNWHEHGLYDVPAMIDYILSVTRRPTLSYIGHSMGTTM 184 (370)
Q Consensus 113 ~~vlllHG~~~~~~~w~~~--~~~~L---~~~~~-~~~~--~~~~~~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~v 184 (370)
|+||++||++++...|... .+. + +.+|+ +.+| ++. .++.+.++.+++.++.++++++||||||.+
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~-l~~~~~~~~v~~~dl~g~~------~~~~~~l~~l~~~~~~~~~~lvG~S~Gg~~ 74 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNW-LAQHHPDIEMIVPQLPPYP------ADAAELLESLVLEHGGDPLGLVGSSLGGYY 74 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHH-HHHhCCCCeEEeCCCCCCH------HHHHHHHHHHHHHcCCCCeEEEEECHHHHH
Confidence 5899999999999999853 233 4 23577 6666 321 267778899999999999999999999999
Q ss_pred HHHHHhcCh
Q psy6856 185 FYVMASMRP 193 (370)
Q Consensus 185 a~~~a~~~p 193 (370)
++.+|.++|
T Consensus 75 a~~~a~~~~ 83 (190)
T PRK11071 75 ATWLSQCFM 83 (190)
T ss_pred HHHHHHHcC
Confidence 999999988
No 54
>KOG1552|consensus
Probab=99.39 E-value=3.4e-12 Score=112.71 Aligned_cols=113 Identities=20% Similarity=0.176 Sum_probs=81.8
Q ss_pred cceEEEEECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhHhhhccccccCC--cce---ecCC-----CCCCcc-ccc
Q psy6856 86 SSETHRTKTQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDSWILRGQEDLGN--LYK---LYPK-----NVNWHE-HGL 154 (370)
Q Consensus 86 ~~e~~~v~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~~~~~L~~--~~~---~~~~-----~~~~~~-~~~ 154 (370)
..|...++|+-|-.+...++.......++++++||+....+....+... |+. ++. +|+. .....| -..
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~~~~~~lly~hGNa~Dlgq~~~~~~~-l~~~ln~nv~~~DYSGyG~S~G~psE~n~y 112 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPEAAHPTLLYSHGNAADLGQMVELFKE-LSIFLNCNVVSYDYSGYGRSSGKPSERNLY 112 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCccccceEEEEcCCcccchHHHHHHHHH-HhhcccceEEEEecccccccCCCcccccch
Confidence 5677778898887777555543333458999999998877765555555 544 333 5554 222223 334
Q ss_pred CCHHHHHHHHHHHcC-CCCEEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 155 YDVPAMIDYILSVTR-RPTLSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 155 ~D~~~~i~~l~~~~~-~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
+|+.++.+.+.+..| .++++++|+|+|+..++.+|++.| ++.+++
T Consensus 113 ~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL 158 (258)
T KOG1552|consen 113 ADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVL 158 (258)
T ss_pred hhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEE
Confidence 599999999999995 789999999999999999999998 566554
No 55
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.39 E-value=1.3e-12 Score=126.04 Aligned_cols=52 Identities=15% Similarity=0.084 Sum_probs=46.3
Q ss_pred ccccCCHHHHHHHHHHHcCCCCEE-EEEeChhHHHHHHHHhcChhhhhcccee
Q psy6856 151 EHGLYDVPAMIDYILSVTRRPTLS-YIGHSMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 151 ~~~~~D~~~~i~~l~~~~~~~~~~-lvGhS~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
.+...|+.+++..+++++|+++++ ++||||||++++.+|.++|+++++++++
T Consensus 140 ~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~i 192 (389)
T PRK06765 140 VVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGV 192 (389)
T ss_pred cCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEE
Confidence 345557788888889999999997 9999999999999999999999999875
No 56
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.37 E-value=7.2e-12 Score=124.48 Aligned_cols=91 Identities=12% Similarity=0.080 Sum_probs=67.8
Q ss_pred CCCeEEEeCCCCCChhHhhh-----cccccc-CCcce---ecCC-------CCCCcccccCCHHHHHHHHHHHcCCCCEE
Q psy6856 111 NSPPVLLQHGLCLASDSWIL-----RGQEDL-GNLYK---LYPK-------NVNWHEHGLYDVPAMIDYILSVTRRPTLS 174 (370)
Q Consensus 111 ~~~~vlllHG~~~~~~~w~~-----~~~~~L-~~~~~---~~~~-------~~~~~~~~~~D~~~~i~~l~~~~~~~~~~ 174 (370)
.++|||++||+......|.. .... | .+||+ +|.+ ..+.+++..+++.++++.+++.+|.++++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~-L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~ 265 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRW-LVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVN 265 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHH-HHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeE
Confidence 57999999999888877753 3444 4 67888 4544 22344555556888999999999999999
Q ss_pred EEEeChhHHHHH----HHHhcC-hhhhhcccee
Q psy6856 175 YIGHSMGTTMFY----VMASMR-PEYNRKINLQ 202 (370)
Q Consensus 175 lvGhS~GG~va~----~~a~~~-p~~v~~l~~~ 202 (370)
++||||||.++. .+++.+ ++++++++++
T Consensus 266 lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll 298 (532)
T TIGR01838 266 CVGYCIGGTLLSTALAYLAARGDDKRIKSATFF 298 (532)
T ss_pred EEEECcCcHHHHHHHHHHHHhCCCCccceEEEE
Confidence 999999999862 245555 7778888764
No 57
>PRK10566 esterase; Provisional
Probab=99.34 E-value=2.8e-12 Score=116.44 Aligned_cols=94 Identities=16% Similarity=0.212 Sum_probs=64.3
Q ss_pred EEEEEcCCC--CCCCeEEEeCCCCCChhHhhhcccccc-CCcce-ecCC--CC--CCcc--------------cccCCHH
Q psy6856 101 TMHRIVPKY--ANSPPVLLQHGLCLASDSWILRGQEDL-GNLYK-LYPK--NV--NWHE--------------HGLYDVP 158 (370)
Q Consensus 101 ~~~~i~~~~--~~~~~vlllHG~~~~~~~w~~~~~~~L-~~~~~-~~~~--~~--~~~~--------------~~~~D~~ 158 (370)
.+++.|.+. +..|+||++||++++...|...... | .+||+ +.++ .. +... ....|+.
T Consensus 14 ~~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~-l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (249)
T PRK10566 14 VLHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVA-LAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFP 92 (249)
T ss_pred eEEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHH-HHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHH
Confidence 355566432 3468999999999999888888877 7 56888 4444 21 1110 0122444
Q ss_pred HHHHHHHHH--cCCCCEEEEEeChhHHHHHHHHhcChhh
Q psy6856 159 AMIDYILSV--TRRPTLSYIGHSMGTTMFYVMASMRPEY 195 (370)
Q Consensus 159 ~~i~~l~~~--~~~~~~~lvGhS~GG~va~~~a~~~p~~ 195 (370)
++++++.+. .+.++++++|||+||.+++.++.++|+.
T Consensus 93 ~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~ 131 (249)
T PRK10566 93 TLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWV 131 (249)
T ss_pred HHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCe
Confidence 455555444 3557999999999999999999988863
No 58
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.31 E-value=5.5e-12 Score=119.69 Aligned_cols=117 Identities=19% Similarity=0.131 Sum_probs=69.3
Q ss_pred EECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChh-Hh-------------------------hhcccccc-CCcce-ec
Q psy6856 92 TKTQDGYTLTMHRIVPKYANSPPVLLQHGLCLASD-SW-------------------------ILRGQEDL-GNLYK-LY 143 (370)
Q Consensus 92 v~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~-~w-------------------------~~~~~~~L-~~~~~-~~ 143 (370)
+.+.||..|..+..... ..+.+|+++||++++.. .+ ...+.. | .+||. +.
T Consensus 2 ~~~~~g~~l~~~~~~~~-~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~-l~~~G~~V~~ 79 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK-NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIEN-FNKNGYSVYG 79 (332)
T ss_pred ccCCCCCeEEEeeeecc-CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHH-HHHCCCcEEE
Confidence 46789998887665432 45679999999999996 21 123444 5 66788 44
Q ss_pred CC----CCCCc--c-c----ccCCHHHHHHHHHHH-----------------------cC-CCCEEEEEeChhHHHHHHH
Q psy6856 144 PK----NVNWH--E-H----GLYDVPAMIDYILSV-----------------------TR-RPTLSYIGHSMGTTMFYVM 188 (370)
Q Consensus 144 ~~----~~~~~--~-~----~~~D~~~~i~~l~~~-----------------------~~-~~~~~lvGhS~GG~va~~~ 188 (370)
.| +.+.. . . ...|+.+++..+++. .. ..+++++||||||.+++.+
T Consensus 80 ~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~ 159 (332)
T TIGR01607 80 LDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRL 159 (332)
T ss_pred ecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHH
Confidence 44 21111 0 1 111233333333332 11 3589999999999999999
Q ss_pred HhcChhh---hh--ccceeecccccee
Q psy6856 189 ASMRPEY---NR--KINLQISLAPVAY 210 (370)
Q Consensus 189 a~~~p~~---v~--~l~~~~~~aP~~~ 210 (370)
+.++++. .+ .+..+++++|...
T Consensus 160 ~~~~~~~~~~~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 160 LELLGKSNENNDKLNIKGCISLSGMIS 186 (332)
T ss_pred HHHhccccccccccccceEEEeccceE
Confidence 8765431 11 3444455676654
No 59
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.28 E-value=1.5e-11 Score=132.53 Aligned_cols=92 Identities=16% Similarity=0.152 Sum_probs=63.8
Q ss_pred CCCCeEEEeCCCCCChhHhhhc-----ccccc-CCcce-ecCC-CCCCcc--cccCCHHHHHHHHHHHc------CCCCE
Q psy6856 110 ANSPPVLLQHGLCLASDSWILR-----GQEDL-GNLYK-LYPK-NVNWHE--HGLYDVPAMIDYILSVT------RRPTL 173 (370)
Q Consensus 110 ~~~~~vlllHG~~~~~~~w~~~-----~~~~L-~~~~~-~~~~-~~~~~~--~~~~D~~~~i~~l~~~~------~~~~~ 173 (370)
..++||||+||++.+...|+.+ .+. | .+||+ +.+| +.+... ...+++.+.+..+.+.+ +.+++
T Consensus 65 ~~~~plllvhg~~~~~~~~d~~~~~s~v~~-L~~~g~~v~~~d~G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~~v 143 (994)
T PRK07868 65 PVGPPVLMVHPMMMSADMWDVTRDDGAVGI-LHRAGLDPWVIDFGSPDKVEGGMERNLADHVVALSEAIDTVKDVTGRDV 143 (994)
T ss_pred CCCCcEEEECCCCCCccceecCCcccHHHH-HHHCCCEEEEEcCCCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCCce
Confidence 3679999999999999999987 444 5 66888 5555 221111 11235555554444333 34789
Q ss_pred EEEEeChhHHHHHHHHhcC-hhhhhcccee
Q psy6856 174 SYIGHSMGTTMFYVMASMR-PEYNRKINLQ 202 (370)
Q Consensus 174 ~lvGhS~GG~va~~~a~~~-p~~v~~l~~~ 202 (370)
+++||||||.+++.+|+.+ ++++++++++
T Consensus 144 ~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~ 173 (994)
T PRK07868 144 HLVGYSQGGMFCYQAAAYRRSKDIASIVTF 173 (994)
T ss_pred EEEEEChhHHHHHHHHHhcCCCccceEEEE
Confidence 9999999999999998755 5578888753
No 60
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.27 E-value=3.2e-11 Score=110.16 Aligned_cols=116 Identities=12% Similarity=0.112 Sum_probs=77.7
Q ss_pred EEEEECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCCh----hHhhhcccccc-CCcce-e--cCC--CCCCcccccC---
Q psy6856 89 THRTKTQDGYTLTMHRIVPKYANSPPVLLQHGLCLAS----DSWILRGQEDL-GNLYK-L--YPK--NVNWHEHGLY--- 155 (370)
Q Consensus 89 ~~~v~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~----~~w~~~~~~~L-~~~~~-~--~~~--~~~~~~~~~~--- 155 (370)
...+.+++|.....++.|.+.+..++||++||++++. ..|..+++. | .+||. + |++ +.+..+....
T Consensus 2 ~~~l~~~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~-La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~ 80 (266)
T TIGR03101 2 PFFLDAPHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARA-FAAGGFGVLQIDLYGCGDSAGDFAAARWD 80 (266)
T ss_pred CEEecCCCCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHH-HHHCCCEEEEECCCCCCCCCCccccCCHH
Confidence 4567788888777676665444467899999998753 356666777 7 56888 4 444 2222111111
Q ss_pred ----CHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhccceeeccccce
Q psy6856 156 ----DVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQISLAPVA 209 (370)
Q Consensus 156 ----D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~aP~~ 209 (370)
|+.++++.+ +..+.++++++||||||.+++.+|.++|+.++++++ ++|..
T Consensus 81 ~~~~Dv~~ai~~L-~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL---~~P~~ 134 (266)
T TIGR03101 81 VWKEDVAAAYRWL-IEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVL---WQPVV 134 (266)
T ss_pred HHHHHHHHHHHHH-HhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEE---ecccc
Confidence 333333333 445778999999999999999999999988777764 45543
No 61
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.23 E-value=2.1e-11 Score=100.77 Aligned_cols=85 Identities=20% Similarity=0.192 Sum_probs=60.8
Q ss_pred eEEEeCCCCCChhHhhhcccccc-CCcce-ecCC--CCCCcccccCCHHHHHHHHHH-HcCCCCEEEEEeChhHHHHHHH
Q psy6856 114 PVLLQHGLCLASDSWILRGQEDL-GNLYK-LYPK--NVNWHEHGLYDVPAMIDYILS-VTRRPTLSYIGHSMGTTMFYVM 188 (370)
Q Consensus 114 ~vlllHG~~~~~~~w~~~~~~~L-~~~~~-~~~~--~~~~~~~~~~D~~~~i~~l~~-~~~~~~~~lvGhS~GG~va~~~ 188 (370)
+||++||++++...|...... | .+||. +.++ ..... ....++.+.++.+.. ..+.+++.++|||+||.+++.+
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~-l~~~G~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~ 78 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEA-LAEQGYAVVAFDYPGHGDS-DGADAVERVLADIRAGYPDPDRIILIGHSMGGAIAANL 78 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHH-HHHTTEEEEEESCTTSTTS-HHSHHHHHHHHHHHHHHCTCCEEEEEEETHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHH-HHHCCCEEEEEecCCCCcc-chhHHHHHHHHHHHhhcCCCCcEEEEEEccCcHHHHHH
Confidence 689999999999999988888 7 66888 4444 22211 222255555665533 2477899999999999999999
Q ss_pred HhcChhhhhccce
Q psy6856 189 ASMRPEYNRKINL 201 (370)
Q Consensus 189 a~~~p~~v~~l~~ 201 (370)
+.++ ..++++++
T Consensus 79 ~~~~-~~v~~~v~ 90 (145)
T PF12695_consen 79 AARN-PRVKAVVL 90 (145)
T ss_dssp HHHS-TTESEEEE
T ss_pred hhhc-cceeEEEE
Confidence 9987 44555543
No 62
>KOG1838|consensus
Probab=99.21 E-value=5.4e-11 Score=112.35 Aligned_cols=114 Identities=18% Similarity=0.171 Sum_probs=83.2
Q ss_pred CCcceEEEEECCCCcEEEEEEEcCCC-------CCCCeEEEeCCCCCChhHhhhcccccc-----CCcce---ecCCC--
Q psy6856 84 GLSSETHRTKTQDGYTLTMHRIVPKY-------ANSPPVLLQHGLCLASDSWILRGQEDL-----GNLYK---LYPKN-- 146 (370)
Q Consensus 84 ~~~~e~~~v~t~dG~~l~~~~i~~~~-------~~~~~vlllHG~~~~~~~w~~~~~~~L-----~~~~~---~~~~~-- 146 (370)
..+++...++++||-.+.+-++..+. +..|.||++||+.+++.. ..+.. | .+||+ +..++
T Consensus 90 ~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~--~YVr~-lv~~a~~~G~r~VVfN~RG~~ 166 (409)
T KOG1838|consen 90 PVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHE--SYVRH-LVHEAQRKGYRVVVFNHRGLG 166 (409)
T ss_pred CCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChh--HHHHH-HHHHHHhCCcEEEEECCCCCC
Confidence 45677888999999888876664322 356999999999999885 22222 2 66787 44441
Q ss_pred -------CCCcccccCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 147 -------VNWHEHGLYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 147 -------~~~~~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
..+...-..|+.++++++.++....++..+|.||||.+...|..+..+.. .++.
T Consensus 167 g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~-~l~~ 227 (409)
T KOG1838|consen 167 GSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNT-PLIA 227 (409)
T ss_pred CCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCC-Ccee
Confidence 11112223499999999999999999999999999999999998876643 4443
No 63
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.19 E-value=3.7e-10 Score=100.23 Aligned_cols=97 Identities=14% Similarity=0.156 Sum_probs=64.6
Q ss_pred EEcCC-CCCCCeEEEeCCCCCChhHhhhc--ccccc--CCcce-ecCC--CC-------CCcc--------cccCCHHHH
Q psy6856 104 RIVPK-YANSPPVLLQHGLCLASDSWILR--GQEDL--GNLYK-LYPK--NV-------NWHE--------HGLYDVPAM 160 (370)
Q Consensus 104 ~i~~~-~~~~~~vlllHG~~~~~~~w~~~--~~~~L--~~~~~-~~~~--~~-------~~~~--------~~~~D~~~~ 160 (370)
++|.+ .+..|+||++||.+++..+|... ... + ..+|. +.++ +. .+-. ....|+...
T Consensus 4 y~P~~~~~~~P~vv~lHG~~~~~~~~~~~~~~~~-~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (212)
T TIGR01840 4 YVPAGLTGPRALVLALHGCGQTASAYVIDWGWKA-AADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQL 82 (212)
T ss_pred EcCCCCCCCCCEEEEeCCCCCCHHHHhhhcChHH-HHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHH
Confidence 34433 24568999999999998877521 222 2 34666 5555 11 1100 112355667
Q ss_pred HHHHHHHcCC--CCEEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 161 IDYILSVTRR--PTLSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 161 i~~l~~~~~~--~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
++++.+..++ ++++++||||||.+++.++.++|+.+.+++.
T Consensus 83 i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~ 125 (212)
T TIGR01840 83 IDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGAS 125 (212)
T ss_pred HHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEe
Confidence 7777666544 5899999999999999999999998777654
No 64
>KOG2984|consensus
Probab=99.17 E-value=1.5e-11 Score=103.95 Aligned_cols=101 Identities=15% Similarity=0.100 Sum_probs=68.6
Q ss_pred CcEEEEEEEcCCCCCCCeEEEeCCCCCChh-Hhhhcccccc--CCcce---ecCCCCC----C-c----ccccCCHHHHH
Q psy6856 97 GYTLTMHRIVPKYANSPPVLLQHGLCLASD-SWILRGQEDL--GNLYK---LYPKNVN----W-H----EHGLYDVPAMI 161 (370)
Q Consensus 97 G~~l~~~~i~~~~~~~~~vlllHG~~~~~~-~w~~~~~~~L--~~~~~---~~~~~~~----~-~----~~~~~D~~~~i 161 (370)
|..|.+.. .| .....||++.|..||.. +|.++..+ | ...+. .||.+|. + . +.-..|..+++
T Consensus 30 g~ql~y~~--~G-~G~~~iLlipGalGs~~tDf~pql~~-l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~av 105 (277)
T KOG2984|consen 30 GTQLGYCK--YG-HGPNYILLIPGALGSYKTDFPPQLLS-LFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAV 105 (277)
T ss_pred Cceeeeee--cC-CCCceeEecccccccccccCCHHHHh-cCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHH
Confidence 44455443 33 22346888999888766 78877777 5 12244 5554111 1 1 12233666665
Q ss_pred HHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhcccee
Q psy6856 162 DYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 162 ~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
+ +++.+..+++.++|+|-||..|+..|+++++.|++++.+
T Consensus 106 d-LM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiw 145 (277)
T KOG2984|consen 106 D-LMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIW 145 (277)
T ss_pred H-HHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheee
Confidence 4 468899999999999999999999999999999998753
No 65
>KOG2382|consensus
Probab=99.16 E-value=1.4e-10 Score=106.04 Aligned_cols=202 Identities=15% Similarity=0.194 Sum_probs=120.9
Q ss_pred CCCCeEEEeCCCCCChhHhhhccccccCCcc-----eecCC--CCC--CcccccCCHHHHHHHHHHHc----CCCCEEEE
Q psy6856 110 ANSPPVLLQHGLCLASDSWILRGQEDLGNLY-----KLYPK--NVN--WHEHGLYDVPAMIDYILSVT----RRPTLSYI 176 (370)
Q Consensus 110 ~~~~~vlllHG~~~~~~~w~~~~~~~L~~~~-----~~~~~--~~~--~~~~~~~D~~~~i~~l~~~~----~~~~~~lv 176 (370)
...||++++||+.||..+|..+..+ |.+.. .+|.| +.+ ...+...+++.++..+++.. ...++.++
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~-Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~ 128 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKN-LSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGSTRLDPVVLL 128 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHH-hcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHcccccccCCceec
Confidence 5679999999999999999999998 83332 25555 222 22233335566666666665 46799999
Q ss_pred EeChhH-HHHHHHHhcChhhhhccceeeccccceeecCCCcccee----eeecc------ccHHHHHHHhhh----cccc
Q psy6856 177 GHSMGT-TMFYVMASMRPEYNRKINLQISLAPVAYVSRMKSYPLV----FKHFA------DNIKYITKVLRK----NRKY 241 (370)
Q Consensus 177 GhS~GG-~va~~~a~~~p~~v~~l~~~~~~aP~~~~~~~~~~~~~----l~~~~------~~~~~l~~~~~~----~g~~ 241 (370)
|||||| .+++..+...|+.+.+++. +.++|......... ... +.... ...+.+...+.. ....
T Consensus 129 GHsmGG~~~~m~~t~~~p~~~~rliv-~D~sP~~~~~~~~e-~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~ 206 (315)
T KOG2382|consen 129 GHSMGGVKVAMAETLKKPDLIERLIV-EDISPGGVGRSYGE-YRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVR 206 (315)
T ss_pred ccCcchHHHHHHHHHhcCcccceeEE-EecCCccCCcccch-HHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHH
Confidence 999999 8888888899999998886 68888643222111 110 11000 111111111111 1111
Q ss_pred ccc-chh-----------------hhhHH-Hc-ccCCC-Ch-hhhHHhhhhhhccCCCCCCCChhHHHHHHhcCCCc--e
Q psy6856 242 EIL-ERR-----------------LANPI-AI-ICKDP-TL-RPICYQAAFLIIGPDLYQMPDENIITAILTHFPAG--T 297 (370)
Q Consensus 242 ~~~-~~~-----------------~~~~~-~~-~~~~~-~~-~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~p~~--~ 297 (370)
+|+ .+. ..+.+ .. ....+ .+ ......++.++.|.++..+ +.+..+.+...+|.. .
T Consensus 207 ~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv-~~~~~~~~~~~fp~~e~~ 285 (315)
T KOG2382|consen 207 QFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFV-PDEHYPRMEKIFPNVEVH 285 (315)
T ss_pred HHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCc-ChhHHHHHHHhccchhee
Confidence 111 110 00111 10 11110 01 1112233446889999999 999999999999986 3
Q ss_pred eeccccceeeehccCccc
Q psy6856 298 SFKNVIHYLQNIKALDFQ 315 (370)
Q Consensus 298 s~~~~~h~~~~~~~~~f~ 315 (370)
.+.+.+||.+.++|++|.
T Consensus 286 ~ld~aGHwVh~E~P~~~~ 303 (315)
T KOG2382|consen 286 ELDEAGHWVHLEKPEEFI 303 (315)
T ss_pred ecccCCceeecCCHHHHH
Confidence 577799999999987765
No 66
>PRK11460 putative hydrolase; Provisional
Probab=99.12 E-value=2.6e-10 Score=102.64 Aligned_cols=90 Identities=16% Similarity=0.145 Sum_probs=58.3
Q ss_pred CCCCCeEEEeCCCCCChhHhhhccccccCC-c--ce-ecCCC---------CCCc---cccc----CCHH-------HHH
Q psy6856 109 YANSPPVLLQHGLCLASDSWILRGQEDLGN-L--YK-LYPKN---------VNWH---EHGL----YDVP-------AMI 161 (370)
Q Consensus 109 ~~~~~~vlllHG~~~~~~~w~~~~~~~L~~-~--~~-~~~~~---------~~~~---~~~~----~D~~-------~~i 161 (370)
.+..++||++||++++..+|....+. |.. . .. ++++. .+|- .... .++. +.+
T Consensus 13 ~~~~~~vIlLHG~G~~~~~~~~l~~~-l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i 91 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPVAMGEIGSW-FAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETV 91 (232)
T ss_pred CCCCcEEEEEeCCCCChHHHHHHHHH-HHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHH
Confidence 35678899999999999999998888 732 2 22 45541 1111 0111 1122 233
Q ss_pred HHHHHHcCC--CCEEEEEeChhHHHHHHHHhcChhhhhcc
Q psy6856 162 DYILSVTRR--PTLSYIGHSMGTTMFYVMASMRPEYNRKI 199 (370)
Q Consensus 162 ~~l~~~~~~--~~~~lvGhS~GG~va~~~a~~~p~~v~~l 199 (370)
+++.++.+. ++++++||||||.+++.++.++|+.+..+
T Consensus 92 ~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~v 131 (232)
T PRK11460 92 RYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRV 131 (232)
T ss_pred HHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEE
Confidence 334444444 58999999999999999998888654443
No 67
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.10 E-value=1.2e-09 Score=107.84 Aligned_cols=98 Identities=9% Similarity=0.062 Sum_probs=72.3
Q ss_pred CCCCeEEEeCCCCCChhHhhhccccc----c-CCcce---ecCC-------CCCCcccccCCHHHHHHHHHHHcCCCCEE
Q psy6856 110 ANSPPVLLQHGLCLASDSWILRGQED----L-GNLYK---LYPK-------NVNWHEHGLYDVPAMIDYILSVTRRPTLS 174 (370)
Q Consensus 110 ~~~~~vlllHG~~~~~~~w~~~~~~~----L-~~~~~---~~~~-------~~~~~~~~~~D~~~~i~~l~~~~~~~~~~ 174 (370)
..++|||+++.+-.-...|...-.++ | ++||. ++.+ .++++++.. .+.++++.+.+..|.++++
T Consensus 213 v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~~~ldDYv~-~i~~Ald~V~~~tG~~~vn 291 (560)
T TIGR01839 213 QHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHREWGLSTYVD-ALKEAVDAVRAITGSRDLN 291 (560)
T ss_pred cCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhcCCCHHHHHH-HHHHHHHHHHHhcCCCCee
Confidence 45789999998875555554333232 3 77888 4543 455566664 7888899999999999999
Q ss_pred EEEeChhHHHHHH----HHhcChh-hhhccceeecccccee
Q psy6856 175 YIGHSMGTTMFYV----MASMRPE-YNRKINLQISLAPVAY 210 (370)
Q Consensus 175 lvGhS~GG~va~~----~a~~~p~-~v~~l~~~~~~aP~~~ 210 (370)
++||||||.++.. +|+++++ +++.++++ .+|..+
T Consensus 292 l~GyC~GGtl~a~~~a~~aA~~~~~~V~sltll--atplDf 330 (560)
T TIGR01839 292 LLGACAGGLTCAALVGHLQALGQLRKVNSLTYL--VSLLDS 330 (560)
T ss_pred EEEECcchHHHHHHHHHHHhcCCCCceeeEEee--eccccc
Confidence 9999999999997 8888886 68888753 345443
No 68
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.07 E-value=5.3e-10 Score=103.78 Aligned_cols=49 Identities=20% Similarity=0.170 Sum_probs=42.3
Q ss_pred cCCHHHHHHHHHHHcCCCCEE-EEEeChhHHHHHHHHhcChhhhhcccee
Q psy6856 154 LYDVPAMIDYILSVTRRPTLS-YIGHSMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 154 ~~D~~~~i~~l~~~~~~~~~~-lvGhS~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
..|+..+-..+++++|++++. +||-||||+.|+..+.++||+|++++.+
T Consensus 129 i~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~i 178 (368)
T COG2021 129 IRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPI 178 (368)
T ss_pred HHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhhee
Confidence 335555556778999999998 9999999999999999999999999864
No 69
>PLN02442 S-formylglutathione hydrolase
Probab=99.05 E-value=1.4e-09 Score=100.89 Aligned_cols=91 Identities=14% Similarity=0.231 Sum_probs=59.3
Q ss_pred CCCeEEEeCCCCCChhHhhhccc--ccc-CCcce-ecCCCC---------------C------------------Ccccc
Q psy6856 111 NSPPVLLQHGLCLASDSWILRGQ--EDL-GNLYK-LYPKNV---------------N------------------WHEHG 153 (370)
Q Consensus 111 ~~~~vlllHG~~~~~~~w~~~~~--~~L-~~~~~-~~~~~~---------------~------------------~~~~~ 153 (370)
..|+|+++||++++..+|..... ..+ ..++. +.++.. + +.+..
T Consensus 46 ~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (283)
T PLN02442 46 KVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYV 125 (283)
T ss_pred CCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhH
Confidence 46899999999999988865432 202 33555 444300 0 00011
Q ss_pred cCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 154 LYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 154 ~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
..+++..++...+.++.++++++||||||..|+.++.++|+++++++.
T Consensus 126 ~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~ 173 (283)
T PLN02442 126 VKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSA 173 (283)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEE
Confidence 123333444444556888999999999999999999999988776543
No 70
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.04 E-value=4e-10 Score=103.00 Aligned_cols=106 Identities=23% Similarity=0.228 Sum_probs=70.0
Q ss_pred ceEEEEECCCCcEEEEEEEc-CCCCCCCeEEEeCCCCCChhHh--hhcccccc-CCcce---ecCC------C--CC-Cc
Q psy6856 87 SETHRTKTQDGYTLTMHRIV-PKYANSPPVLLQHGLCLASDSW--ILRGQEDL-GNLYK---LYPK------N--VN-WH 150 (370)
Q Consensus 87 ~e~~~v~t~dG~~l~~~~i~-~~~~~~~~vlllHG~~~~~~~w--~~~~~~~L-~~~~~---~~~~------~--~~-~~ 150 (370)
+....+.|+||-.....+.. .....+|.||++||+.|++.+= +..... + .+||. ++.| . .. ++
T Consensus 49 ~~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~-~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh 127 (345)
T COG0429 49 YTRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRA-LSRRGWLVVVFHFRGCSGEANTSPRLYH 127 (345)
T ss_pred cceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHH-HHhcCCeEEEEecccccCCcccCcceec
Confidence 34557899999777765544 3345678999999999998852 112222 3 55666 3433 1 00 11
Q ss_pred ccccCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcCh
Q psy6856 151 EHGLYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRP 193 (370)
Q Consensus 151 ~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p 193 (370)
.....|+...++.+.......++..||.|+||.+...+..+..
T Consensus 128 ~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg 170 (345)
T COG0429 128 SGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEG 170 (345)
T ss_pred ccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhc
Confidence 1223488888888888888899999999999966555555544
No 71
>COG0400 Predicted esterase [General function prediction only]
Probab=99.04 E-value=1.3e-09 Score=95.45 Aligned_cols=92 Identities=14% Similarity=0.159 Sum_probs=62.8
Q ss_pred CCCCCeEEEeCCCCCChhHhhhccccccCCcce-ecCC----------CCCCcccccC----------CHHHHHHHHHHH
Q psy6856 109 YANSPPVLLQHGLCLASDSWILRGQEDLGNLYK-LYPK----------NVNWHEHGLY----------DVPAMIDYILSV 167 (370)
Q Consensus 109 ~~~~~~vlllHG~~~~~~~w~~~~~~~L~~~~~-~~~~----------~~~~~~~~~~----------D~~~~i~~l~~~ 167 (370)
.+..|+|||+||+|++..++...... +-.+.. ++++ -+.+.+...+ .+.+.++.+.++
T Consensus 15 ~p~~~~iilLHG~Ggde~~~~~~~~~-~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 15 DPAAPLLILLHGLGGDELDLVPLPEL-ILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CCCCcEEEEEecCCCChhhhhhhhhh-cCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 45667899999999999998875444 322333 3333 1111111111 233455555666
Q ss_pred cCC--CCEEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 168 TRR--PTLSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 168 ~~~--~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
+++ ++++++|+|+|+.+++.+..++|+..+++++
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail 129 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAIL 129 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchhhccchh
Confidence 776 8999999999999999999999987777765
No 72
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.04 E-value=1.5e-12 Score=115.65 Aligned_cols=55 Identities=22% Similarity=0.310 Sum_probs=49.1
Q ss_pred CCcccccCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhcccee
Q psy6856 148 NWHEHGLYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 148 ~~~~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
...++...|++++++.+++.++.++++++||||||.+++.+|+++|+++++++++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~ 75 (230)
T PF00561_consen 21 DFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLI 75 (230)
T ss_dssp GSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEE
T ss_pred CcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEE
Confidence 3445566689999999999999999999999999999999999999999998864
No 73
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.01 E-value=2.2e-09 Score=110.07 Aligned_cols=111 Identities=24% Similarity=0.262 Sum_probs=74.0
Q ss_pred cCCcceEEEEECCCCcEEEEEEEcCCCCC----CCeEEEeCCCCCChhHhhhc--ccccc-CCcce-ecC--C---CC--
Q psy6856 83 WGLSSETHRTKTQDGYTLTMHRIVPKYAN----SPPVLLQHGLCLASDSWILR--GQEDL-GNLYK-LYP--K---NV-- 147 (370)
Q Consensus 83 ~~~~~e~~~v~t~dG~~l~~~~i~~~~~~----~~~vlllHG~~~~~~~w~~~--~~~~L-~~~~~-~~~--~---~~-- 147 (370)
...+.|..++.+.||..+..|.+.+.... -|.||++||.+.....|... ... | ..||. +.+ + ++
T Consensus 361 ~~~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~-~~~~G~~V~~~n~RGS~GyG~ 439 (620)
T COG1506 361 KLAEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQV-LASAGYAVLAPNYRGSTGYGR 439 (620)
T ss_pred ccCCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHH-HhcCCeEEEEeCCCCCCccHH
Confidence 34577889999999999998777543222 27899999998666664222 222 3 67888 443 3 11
Q ss_pred --------CCcccccCCHHHHHHHHHHHcC---CCCEEEEEeChhHHHHHHHHhcChhh
Q psy6856 148 --------NWHEHGLYDVPAMIDYILSVTR---RPTLSYIGHSMGTTMFYVMASMRPEY 195 (370)
Q Consensus 148 --------~~~~~~~~D~~~~i~~l~~~~~---~~~~~lvGhS~GG~va~~~a~~~p~~ 195 (370)
.+.+....|+.+.++. +...+ .+++.+.|||.||.+++..+.+.|..
T Consensus 440 ~F~~~~~~~~g~~~~~D~~~~~~~-l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~f 497 (620)
T COG1506 440 EFADAIRGDWGGVDLEDLIAAVDA-LVKLPLVDPERIGITGGSYGGYMTLLAATKTPRF 497 (620)
T ss_pred HHHHhhhhccCCccHHHHHHHHHH-HHhCCCcChHHeEEeccChHHHHHHHHHhcCchh
Confidence 1112223366666663 34433 35899999999999999999998843
No 74
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=98.92 E-value=1.9e-08 Score=93.02 Aligned_cols=91 Identities=15% Similarity=0.267 Sum_probs=58.7
Q ss_pred CCCCeEEEeCCCCCChhHhhhcc--cccc--CCcce-ecCCC----CC--C-------------------cccc-cCC--
Q psy6856 110 ANSPPVLLQHGLCLASDSWILRG--QEDL--GNLYK-LYPKN----VN--W-------------------HEHG-LYD-- 156 (370)
Q Consensus 110 ~~~~~vlllHG~~~~~~~w~~~~--~~~L--~~~~~-~~~~~----~~--~-------------------~~~~-~~D-- 156 (370)
.+.|+|+++||.+++...|.... .. + ..++. +.++. .. . .+.. .++
T Consensus 40 ~~~P~vvllHG~~~~~~~~~~~~~~~~-la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~ 118 (275)
T TIGR02821 40 GPVPVLWYLSGLTCTHENFMIKAGAQR-FAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMY 118 (275)
T ss_pred CCCCEEEEccCCCCCccHHHhhhHHHH-HHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHH
Confidence 35689999999999999986433 23 4 33566 55541 00 0 0000 011
Q ss_pred --HHHHHHHHHHH---cCCCCEEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 157 --VPAMIDYILSV---TRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 157 --~~~~i~~l~~~---~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
+.+.+..+++. ++.++++++||||||.+++.++.++|+.++++++
T Consensus 119 ~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~ 168 (275)
T TIGR02821 119 SYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSA 168 (275)
T ss_pred HHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEE
Confidence 12333344444 4557899999999999999999999998776653
No 75
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.90 E-value=7.9e-10 Score=102.02 Aligned_cols=95 Identities=16% Similarity=0.190 Sum_probs=64.3
Q ss_pred CCCCCeEEEeCCCCCCh-hHhhhccc-cccC-Ccce-ecCC--CCCCccc---------ccCCHHHHHHHHHHH--cCCC
Q psy6856 109 YANSPPVLLQHGLCLAS-DSWILRGQ-EDLG-NLYK-LYPK--NVNWHEH---------GLYDVPAMIDYILSV--TRRP 171 (370)
Q Consensus 109 ~~~~~~vlllHG~~~~~-~~w~~~~~-~~L~-~~~~-~~~~--~~~~~~~---------~~~D~~~~i~~l~~~--~~~~ 171 (370)
.+++|++|++||+.++. ..|..... ..|. .+|+ +.+| ......+ ...++.+.++.+.+. .+.+
T Consensus 33 ~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~ 112 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLE 112 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChH
Confidence 35678999999999998 67765443 3133 4577 4433 2211110 012455566666665 3557
Q ss_pred CEEEEEeChhHHHHHHHHhcChhhhhccceee
Q psy6856 172 TLSYIGHSMGTTMFYVMASMRPEYNRKINLQI 203 (370)
Q Consensus 172 ~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~ 203 (370)
++++|||||||.+|..++.++|+++.+|+.+.
T Consensus 113 ~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LD 144 (275)
T cd00707 113 NVHLIGHSLGAHVAGFAGKRLNGKLGRITGLD 144 (275)
T ss_pred HEEEEEecHHHHHHHHHHHHhcCccceeEEec
Confidence 99999999999999999999998888887643
No 76
>PRK10115 protease 2; Provisional
Probab=98.88 E-value=1.9e-08 Score=104.14 Aligned_cols=118 Identities=16% Similarity=0.148 Sum_probs=82.7
Q ss_pred CCcceEEEEECCCCcEEEEEEEc-C---CCCCCCeEEEeCCCCCChhH--hhhccccccCCcce---ecCC---------
Q psy6856 84 GLSSETHRTKTQDGYTLTMHRIV-P---KYANSPPVLLQHGLCLASDS--WILRGQEDLGNLYK---LYPK--------- 145 (370)
Q Consensus 84 ~~~~e~~~v~t~dG~~l~~~~i~-~---~~~~~~~vlllHG~~~~~~~--w~~~~~~~L~~~~~---~~~~--------- 145 (370)
.+..|.+++++.||..+.++.+- . ..++.|.||+.||..+.+.. |.......+.+||. ..++
T Consensus 413 ~~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w 492 (686)
T PRK10115 413 NYRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQW 492 (686)
T ss_pred ccEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHH
Confidence 57889999999999999875442 2 13456899999998888753 32222221266777 3334
Q ss_pred ----CCCCcccccCCHHHHHHHHHHH--cCCCCEEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 146 ----NVNWHEHGLYDVPAMIDYILSV--TRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 146 ----~~~~~~~~~~D~~~~i~~l~~~--~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
..........|+.++++++++. ...+++.+.|-|.||.++...+.++|++.+..+.
T Consensus 493 ~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~ 554 (686)
T PRK10115 493 YEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIA 554 (686)
T ss_pred HHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEe
Confidence 1122223345888888888766 3457999999999999999999999997666554
No 77
>PLN00021 chlorophyllase
Probab=98.87 E-value=4.8e-09 Score=98.36 Aligned_cols=105 Identities=21% Similarity=0.276 Sum_probs=71.7
Q ss_pred EcCCCCCCCeEEEeCCCCCChhHhhhcccccc-CCcce-ecCC--CCCCccc--ccCCHHHHHHHHHHH----------c
Q psy6856 105 IVPKYANSPPVLLQHGLCLASDSWILRGQEDL-GNLYK-LYPK--NVNWHEH--GLYDVPAMIDYILSV----------T 168 (370)
Q Consensus 105 i~~~~~~~~~vlllHG~~~~~~~w~~~~~~~L-~~~~~-~~~~--~~~~~~~--~~~D~~~~i~~l~~~----------~ 168 (370)
.|...+..|+||++||++.+...|....+. | .+||. +.+| +...... ...|..+.++++.+. .
T Consensus 45 ~P~~~g~~PvVv~lHG~~~~~~~y~~l~~~-Las~G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~l~~~~~~ 123 (313)
T PLN00021 45 TPSEAGTYPVLLFLHGYLLYNSFYSQLLQH-IASHGFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGLAAVLPEGVRP 123 (313)
T ss_pred eCCCCCCCCEEEEECCCCCCcccHHHHHHH-HHhCCCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhhhhhccccccc
Confidence 344446679999999999999999988888 8 56888 6665 2211111 112444455555432 2
Q ss_pred CCCCEEEEEeChhHHHHHHHHhcChhhh--hccceeecccccee
Q psy6856 169 RRPTLSYIGHSMGTTMFYVMASMRPEYN--RKINLQISLAPVAY 210 (370)
Q Consensus 169 ~~~~~~lvGhS~GG~va~~~a~~~p~~v--~~l~~~~~~aP~~~ 210 (370)
+.++++++||||||.+++.+|.++++.. .++..++++.|...
T Consensus 124 d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g 167 (313)
T PLN00021 124 DLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDG 167 (313)
T ss_pred ChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccc
Confidence 4478999999999999999999988643 24555566677543
No 78
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.86 E-value=4.8e-09 Score=101.74 Aligned_cols=98 Identities=13% Similarity=0.226 Sum_probs=63.4
Q ss_pred CCCCCeEEEeCCCCCCh--hHhhh-cccccc---CCcce-ecCC--CCC---Ccccc--c----CCHHHHHHHHHHHc--
Q psy6856 109 YANSPPVLLQHGLCLAS--DSWIL-RGQEDL---GNLYK-LYPK--NVN---WHEHG--L----YDVPAMIDYILSVT-- 168 (370)
Q Consensus 109 ~~~~~~vlllHG~~~~~--~~w~~-~~~~~L---~~~~~-~~~~--~~~---~~~~~--~----~D~~~~i~~l~~~~-- 168 (370)
++.+|++|++||++++. ..|.. +... | ...++ +.+| +.. +.... . .++++.++.+.+.+
T Consensus 38 n~~~ptvIlIHG~~~s~~~~~w~~~l~~a-l~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl 116 (442)
T TIGR03230 38 NHETKTFIVIHGWTVTGMFESWVPKLVAA-LYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNY 116 (442)
T ss_pred CCCCCeEEEECCCCcCCcchhhHHHHHHH-HHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCC
Confidence 35789999999998764 46776 4444 4 22477 4444 111 11111 1 12334444444333
Q ss_pred CCCCEEEEEeChhHHHHHHHHhcChhhhhccceeecccc
Q psy6856 169 RRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQISLAP 207 (370)
Q Consensus 169 ~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~aP 207 (370)
+.+++++|||||||.+|..++.++|+++.+|+++...+|
T Consensus 117 ~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 117 PWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 468999999999999999999999988888887544334
No 79
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.81 E-value=9.8e-09 Score=91.77 Aligned_cols=95 Identities=23% Similarity=0.277 Sum_probs=58.9
Q ss_pred CCCeEEEeCCCCCChhHhhhccccccC-------C--cce---ecCC-CCC-Cccccc----CCHHHHHHHHHHHc----
Q psy6856 111 NSPPVLLQHGLCLASDSWILRGQEDLG-------N--LYK---LYPK-NVN-WHEHGL----YDVPAMIDYILSVT---- 168 (370)
Q Consensus 111 ~~~~vlllHG~~~~~~~w~~~~~~~L~-------~--~~~---~~~~-~~~-~~~~~~----~D~~~~i~~l~~~~---- 168 (370)
.+.||||+||++|+...|+..... +. . .+. ++++ ..+ ...... .-+...++.+++.+
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~-~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~~ 81 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASE-LQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSNR 81 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHH-HhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhcc
Confidence 578999999999999998877755 41 1 122 2222 111 111111 13445666776666
Q ss_pred -CCCCEEEEEeChhHHHHHHHHhcChhhhhccceeeccc
Q psy6856 169 -RRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQISLA 206 (370)
Q Consensus 169 -~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~a 206 (370)
+.+++++|||||||.+|..++...+....++..++.++
T Consensus 82 ~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~ 120 (225)
T PF07819_consen 82 PPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLG 120 (225)
T ss_pred CCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEc
Confidence 67899999999999999988876443223344434433
No 80
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=98.80 E-value=2.1e-08 Score=92.62 Aligned_cols=109 Identities=17% Similarity=0.091 Sum_probs=66.6
Q ss_pred EEEEECCCCcEEEE-EEEcCCCCCCCeEEEeCCCCC----ChhHhhhcccccc-CCcce-ecCC----CCCCcc-cc---
Q psy6856 89 THRTKTQDGYTLTM-HRIVPKYANSPPVLLQHGLCL----ASDSWILRGQEDL-GNLYK-LYPK----NVNWHE-HG--- 153 (370)
Q Consensus 89 ~~~v~t~dG~~l~~-~~i~~~~~~~~~vlllHG~~~----~~~~w~~~~~~~L-~~~~~-~~~~----~~~~~~-~~--- 153 (370)
...+.+ +|..|.. ...|. .+.+++||++||..+ +...|..+++. | .+||. +.+| +.+..+ ..
T Consensus 4 ~~~~~~-~~~~l~g~~~~p~-~~~~~~vv~i~gg~~~~~g~~~~~~~la~~-l~~~G~~v~~~Dl~G~G~S~~~~~~~~~ 80 (274)
T TIGR03100 4 ALTFSC-EGETLVGVLHIPG-ASHTTGVLIVVGGPQYRVGSHRQFVLLARR-LAEAGFPVLRFDYRGMGDSEGENLGFEG 80 (274)
T ss_pred eEEEEc-CCcEEEEEEEcCC-CCCCCeEEEEeCCccccCCchhHHHHHHHH-HHHCCCEEEEeCCCCCCCCCCCCCCHHH
Confidence 334444 4555554 44443 234667888887653 33345556666 6 56888 4444 222211 11
Q ss_pred -cCCHHHHHHHHHHHc-CCCCEEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 154 -LYDVPAMIDYILSVT-RRPTLSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 154 -~~D~~~~i~~l~~~~-~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
..|+.++++.+.+.. +.++++++||||||.+++.+|.. ++.++++++
T Consensus 81 ~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil 129 (274)
T TIGR03100 81 IDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVL 129 (274)
T ss_pred HHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEE
Confidence 125666666665554 67889999999999999999865 445666654
No 81
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.79 E-value=2.1e-08 Score=94.45 Aligned_cols=99 Identities=17% Similarity=0.213 Sum_probs=73.2
Q ss_pred CCCeEEEeCCCCCChhHhhhcccccc-----CCcce---ec---CC----CCCCcccccCCHHHHHHHHHHHcCCCCEEE
Q psy6856 111 NSPPVLLQHGLCLASDSWILRGQEDL-----GNLYK---LY---PK----NVNWHEHGLYDVPAMIDYILSVTRRPTLSY 175 (370)
Q Consensus 111 ~~~~vlllHG~~~~~~~w~~~~~~~L-----~~~~~---~~---~~----~~~~~~~~~~D~~~~i~~l~~~~~~~~~~l 175 (370)
.++|+|++|-+-..-..|...-.+.+ .+|+. ++ || ...++++...++..+++.+.+.+|.++|++
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~~Inl 185 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQKDINL 185 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCccccce
Confidence 57899999977766666655544432 55655 33 33 455566666678889999999999999999
Q ss_pred EEeChhHHHHHHHHhcChhh-hhccceeeccccceee
Q psy6856 176 IGHSMGTTMFYVMASMRPEY-NRKINLQISLAPVAYV 211 (370)
Q Consensus 176 vGhS~GG~va~~~a~~~p~~-v~~l~~~~~~aP~~~~ 211 (370)
+|||+||+++..+++.++.+ +++++. ..+|..+.
T Consensus 186 iGyCvGGtl~~~ala~~~~k~I~S~T~--lts~~DF~ 220 (445)
T COG3243 186 IGYCVGGTLLAAALALMAAKRIKSLTL--LTSPVDFS 220 (445)
T ss_pred eeEecchHHHHHHHHhhhhccccccee--eecchhhc
Confidence 99999999999999998877 777665 34555543
No 82
>PRK10162 acetyl esterase; Provisional
Probab=98.79 E-value=1.2e-07 Score=89.41 Aligned_cols=103 Identities=12% Similarity=0.058 Sum_probs=69.5
Q ss_pred cceEEEEECCCCcEEEEEE-EcCCCCCCCeEEEeCCCC---CChhHhhhccccccC--Ccce---ecCC---CCCCcccc
Q psy6856 86 SSETHRTKTQDGYTLTMHR-IVPKYANSPPVLLQHGLC---LASDSWILRGQEDLG--NLYK---LYPK---NVNWHEHG 153 (370)
Q Consensus 86 ~~e~~~v~t~dG~~l~~~~-i~~~~~~~~~vlllHG~~---~~~~~w~~~~~~~L~--~~~~---~~~~---~~~~~~~~ 153 (370)
..+++.+.+.+|. +.... .|. ....|+||++||.+ ++...|...... |. .++. ++++ ..++. ..
T Consensus 56 ~~~~~~i~~~~g~-i~~~~y~P~-~~~~p~vv~~HGGg~~~g~~~~~~~~~~~-la~~~g~~Vv~vdYrlape~~~p-~~ 131 (318)
T PRK10162 56 ATRAYMVPTPYGQ-VETRLYYPQ-PDSQATLFYLHGGGFILGNLDTHDRIMRL-LASYSGCTVIGIDYTLSPEARFP-QA 131 (318)
T ss_pred eEEEEEEecCCCc-eEEEEECCC-CCCCCEEEEEeCCcccCCCchhhhHHHHH-HHHHcCCEEEEecCCCCCCCCCC-Cc
Confidence 3678888888884 44333 342 34468899999976 666677777776 62 3666 4444 21221 23
Q ss_pred cCCHHHHHHHHHH---HcCC--CCEEEEEeChhHHHHHHHHhcC
Q psy6856 154 LYDVPAMIDYILS---VTRR--PTLSYIGHSMGTTMFYVMASMR 192 (370)
Q Consensus 154 ~~D~~~~i~~l~~---~~~~--~~~~lvGhS~GG~va~~~a~~~ 192 (370)
..|..++++++.+ .+++ ++++++|+|+||.+++.++.+.
T Consensus 132 ~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~ 175 (318)
T PRK10162 132 IEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWL 175 (318)
T ss_pred HHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHH
Confidence 4577777777754 4554 5899999999999999998754
No 83
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.78 E-value=1.2e-07 Score=85.27 Aligned_cols=118 Identities=13% Similarity=0.124 Sum_probs=81.1
Q ss_pred EEEEECCCCcEEEEEEE--cCC--CCCCCeEEEeCCCCCChhHhhhcccccc-CCcce---ecCC------CCCCccccc
Q psy6856 89 THRTKTQDGYTLTMHRI--VPK--YANSPPVLLQHGLCLASDSWILRGQEDL-GNLYK---LYPK------NVNWHEHGL 154 (370)
Q Consensus 89 ~~~v~t~dG~~l~~~~i--~~~--~~~~~~vlllHG~~~~~~~w~~~~~~~L-~~~~~---~~~~------~~~~~~~~~ 154 (370)
.+.+.+++|...++... ... .+...+||=+||.+||-.+|..+.+. | ..+.+ +.+. ++.-..+..
T Consensus 8 ~~k~~~~~~~~~~~~a~y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi~~~-l~~~~iR~I~iN~PGf~~t~~~~~~~~~n 86 (297)
T PF06342_consen 8 LVKFQAENGKIVTVQAVYEDSLPSGSPLGTVVAFHGSPGSHNDFKYIRPP-LDEAGIRFIGINYPGFGFTPGYPDQQYTN 86 (297)
T ss_pred EEEcccccCceEEEEEEEEecCCCCCCceeEEEecCCCCCccchhhhhhH-HHHcCeEEEEeCCCCCCCCCCCcccccCh
Confidence 34556777766654332 111 12345899999999999999999988 8 66777 3433 222223333
Q ss_pred CCHHHHHHHHHHHcCCC-CEEEEEeChhHHHHHHHHhcChhhhhccceeeccccceeec
Q psy6856 155 YDVPAMIDYILSVTRRP-TLSYIGHSMGTTMFYVMASMRPEYNRKINLQISLAPVAYVS 212 (370)
Q Consensus 155 ~D~~~~i~~l~~~~~~~-~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~aP~~~~~ 212 (370)
.+-...++.+++.++++ +++++|||.|+-.|+.+|+.+| +.++ ++++|.+...
T Consensus 87 ~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~--~~g~---~lin~~G~r~ 140 (297)
T PF06342_consen 87 EERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP--LHGL---VLINPPGLRP 140 (297)
T ss_pred HHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc--cceE---EEecCCcccc
Confidence 35566888999999884 7899999999999999999986 2344 4566666543
No 84
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.78 E-value=4.8e-08 Score=86.91 Aligned_cols=93 Identities=19% Similarity=0.246 Sum_probs=51.4
Q ss_pred CCCCCeEEEeCCCCCChhHhhhcccccc-CCcce-ecCC----------CC---CCcc---ccc---C---CH---HHHH
Q psy6856 109 YANSPPVLLQHGLCLASDSWILRGQEDL-GNLYK-LYPK----------NV---NWHE---HGL---Y---DV---PAMI 161 (370)
Q Consensus 109 ~~~~~~vlllHG~~~~~~~w~~~~~~~L-~~~~~-~~~~----------~~---~~~~---~~~---~---D~---~~~i 161 (370)
.+..+.||++||.|++...|.......+ ..... +.++ +. .|-+ ... . ++ ...+
T Consensus 11 ~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l 90 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERL 90 (216)
T ss_dssp ST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHH
T ss_pred CCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHH
Confidence 4567899999999999988876655101 11121 1111 11 1111 110 1 12 2223
Q ss_pred HHHHHH-----cCCCCEEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 162 DYILSV-----TRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 162 ~~l~~~-----~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
..+++. .+.+++++.|.|+||++++.++.++|+.+.+++.
T Consensus 91 ~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~ 135 (216)
T PF02230_consen 91 DELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVA 135 (216)
T ss_dssp HHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEE
T ss_pred HHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEE
Confidence 333332 2446899999999999999999999987776654
No 85
>KOG2564|consensus
Probab=98.78 E-value=5.6e-09 Score=92.91 Aligned_cols=102 Identities=21% Similarity=0.244 Sum_probs=62.4
Q ss_pred eEEEEECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhHhhhccccccCCcce-----ecCC---CCC---CcccccCC
Q psy6856 88 ETHRTKTQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDSWILRGQEDLGNLYK-----LYPK---NVN---WHEHGLYD 156 (370)
Q Consensus 88 e~~~v~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~~~~~L~~~~~-----~~~~---~~~---~~~~~~~D 156 (370)
|++.+...|+ .+..++--.....+|.++++||.+.|.-+|...+.+ |....+ +|.| +.. .+++..+.
T Consensus 51 edv~i~~~~~-t~n~Y~t~~~~t~gpil~l~HG~G~S~LSfA~~a~e-l~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT 128 (343)
T KOG2564|consen 51 EDVSIDGSDL-TFNVYLTLPSATEGPILLLLHGGGSSALSFAIFASE-LKSKIRCRCLALDLRGHGETKVENEDDLSLET 128 (343)
T ss_pred cccccCCCcc-eEEEEEecCCCCCccEEEEeecCcccchhHHHHHHH-HHhhcceeEEEeeccccCccccCChhhcCHHH
Confidence 3444444454 344444332246789999999999999999999988 732222 4444 111 12232222
Q ss_pred HHHHHHHHHHHc---CCCCEEEEEeChhHHHHHHHHhc
Q psy6856 157 VPAMIDYILSVT---RRPTLSYIGHSMGTTMFYVMASM 191 (370)
Q Consensus 157 ~~~~i~~l~~~~---~~~~~~lvGhS~GG~va~~~a~~ 191 (370)
+..++-.+++.+ ...++++|||||||+||...|..
T Consensus 129 ~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~ 166 (343)
T KOG2564|consen 129 MSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAAS 166 (343)
T ss_pred HHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhh
Confidence 223333333332 24689999999999999887765
No 86
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=98.77 E-value=5.4e-08 Score=92.81 Aligned_cols=127 Identities=13% Similarity=0.026 Sum_probs=75.7
Q ss_pred HHHHHcCCcceEEEEECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhHhhhcc-cccc-CCcce-ecCC----CCCCc
Q psy6856 78 ELLRKWGLSSETHRTKTQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDSWILRG-QEDL-GNLYK-LYPK----NVNWH 150 (370)
Q Consensus 78 ~~~~~~~~~~e~~~v~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~~-~~~L-~~~~~-~~~~----~~~~~ 150 (370)
+.....+++.+++.|.-+++..-.+.++|.+.++.|+||++-|+-+-..++.... +. | ..|+. +..| +.+..
T Consensus 156 ~Aa~l~~~~i~~v~iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~-l~~rGiA~LtvDmPG~G~s~~ 234 (411)
T PF06500_consen 156 KAAKLSDYPIEEVEIPFEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDY-LAPRGIAMLTVDMPGQGESPK 234 (411)
T ss_dssp HHHHHSSSEEEEEEEEETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCC-CHHCT-EEEEE--TTSGGGTT
T ss_pred HHHHhCCCCcEEEEEeeCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHH-HHhCCCEEEEEccCCCccccc
Confidence 3556788999999999988655556778876555566777666666665654433 44 5 56777 5444 11111
Q ss_pred ccccCC----HHHHHHHHHHH--cCCCCEEEEEeChhHHHHHHHHhcChhhhhccceeeccccc
Q psy6856 151 EHGLYD----VPAMIDYILSV--TRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQISLAPV 208 (370)
Q Consensus 151 ~~~~~D----~~~~i~~l~~~--~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~aP~ 208 (370)
.-...| ..+.++++.+. .+..+|.++|.|+||.+|.++|..++++++.++ ..+|.
T Consensus 235 ~~l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV---~~Ga~ 295 (411)
T PF06500_consen 235 WPLTQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVV---ALGAP 295 (411)
T ss_dssp T-S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEE---EES--
T ss_pred CCCCcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEe---eeCch
Confidence 111112 34455555333 355699999999999999999988776655554 44544
No 87
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.74 E-value=7.7e-08 Score=86.65 Aligned_cols=105 Identities=18% Similarity=0.203 Sum_probs=73.6
Q ss_pred eEEEEECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhHhhhcccccc-CCcce-ecCC-------CCCCc--------
Q psy6856 88 ETHRTKTQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDSWILRGQEDL-GNLYK-LYPK-------NVNWH-------- 150 (370)
Q Consensus 88 e~~~v~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~~~~~L-~~~~~-~~~~-------~~~~~-------- 150 (370)
+++.+.++|+..-.++..|.+.+..|.||++|+..|-....+...+. | ..||. +.|+ .....
T Consensus 3 ~~v~~~~~~~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~~i~~~a~r-lA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~ 81 (236)
T COG0412 3 TDVTIPAPDGELPAYLARPAGAGGFPGVIVLHEIFGLNPHIRDVARR-LAKAGYVVLAPDLYGRQGDPTDIEDEPAELET 81 (236)
T ss_pred cceEeeCCCceEeEEEecCCcCCCCCEEEEEecccCCchHHHHHHHH-HHhCCcEEEechhhccCCCCCcccccHHHHhh
Confidence 45677788844333555565544448999999999999998888888 8 77888 6665 00000
Q ss_pred --------ccccCCHHHHHHHHHHHc--CCCCEEEEEeChhHHHHHHHHhcCh
Q psy6856 151 --------EHGLYDVPAMIDYILSVT--RRPTLSYIGHSMGTTMFYVMASMRP 193 (370)
Q Consensus 151 --------~~~~~D~~~~i~~l~~~~--~~~~~~lvGhS~GG~va~~~a~~~p 193 (370)
.....|+.+.++++...- +.++|.++|.||||.+++.+|.+.|
T Consensus 82 ~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~ 134 (236)
T COG0412 82 GLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP 134 (236)
T ss_pred hhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC
Confidence 112235666666664333 3568999999999999999999977
No 88
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.65 E-value=6.1e-07 Score=79.53 Aligned_cols=98 Identities=21% Similarity=0.367 Sum_probs=62.9
Q ss_pred EEcCCC--CCCCeEEEeCCCCCChhHhhhccccc-c--CCcce-ecCC---------CCCCcc----cc---cCCHHHHH
Q psy6856 104 RIVPKY--ANSPPVLLQHGLCLASDSWILRGQED-L--GNLYK-LYPK---------NVNWHE----HG---LYDVPAMI 161 (370)
Q Consensus 104 ~i~~~~--~~~~~vlllHG~~~~~~~w~~~~~~~-L--~~~~~-~~~~---------~~~~~~----~~---~~D~~~~i 161 (370)
++|.+. .+.|.||++||.+++...+.....-. | .+++- +-|+ .+.|.+ .. ...+.+.+
T Consensus 6 YvP~~~~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv 85 (220)
T PF10503_consen 6 YVPPGAPRGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALV 85 (220)
T ss_pred ecCCCCCCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHH
Confidence 455442 24588999999999999875532210 3 23443 2232 111111 11 11355667
Q ss_pred HHHHHHcCC--CCEEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 162 DYILSVTRR--PTLSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 162 ~~l~~~~~~--~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
+++.++.++ .+|++.|+|.||+++..+++.+||.+..+..
T Consensus 86 ~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~ 127 (220)
T PF10503_consen 86 DYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAV 127 (220)
T ss_pred HhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEe
Confidence 777777654 5999999999999999999999998776543
No 89
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.62 E-value=7.1e-08 Score=85.49 Aligned_cols=47 Identities=23% Similarity=0.398 Sum_probs=38.9
Q ss_pred cCCHHHHHHHHHHH--cCCCCEEEEEeChhHHHHHHHHhcChhhhhccc
Q psy6856 154 LYDVPAMIDYILSV--TRRPTLSYIGHSMGTTMFYVMASMRPEYNRKIN 200 (370)
Q Consensus 154 ~~D~~~~i~~l~~~--~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~ 200 (370)
..|+.++++++.+. .+.+++.++|||+||.+++.++.++|++++.++
T Consensus 45 ~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~~f~a~v 93 (213)
T PF00326_consen 45 VDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPDRFKAAV 93 (213)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCCGSSEEE
T ss_pred hhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccceeeeeee
Confidence 44788888888777 355799999999999999999998998766554
No 90
>KOG4667|consensus
Probab=98.57 E-value=3.3e-07 Score=78.82 Aligned_cols=84 Identities=18% Similarity=0.205 Sum_probs=50.3
Q ss_pred CCCCCeEEEeCCCCCChhH--hhhcccccc-CCcce---ecCC-------CCCCccc--ccCCHHHHHHHHHHHcCCCCE
Q psy6856 109 YANSPPVLLQHGLCLASDS--WILRGQEDL-GNLYK---LYPK-------NVNWHEH--GLYDVPAMIDYILSVTRRPTL 173 (370)
Q Consensus 109 ~~~~~~vlllHG~~~~~~~--w~~~~~~~L-~~~~~---~~~~-------~~~~~~~--~~~D~~~~i~~l~~~~~~~~~ 173 (370)
.++...|||+||+-.+... ...++.. | ..+++ +|.+ ++.+..+ ..+|+...++++.+ ...-=-
T Consensus 30 tgs~e~vvlcHGfrS~Kn~~~~~~vA~~-~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~-~nr~v~ 107 (269)
T KOG4667|consen 30 TGSTEIVVLCHGFRSHKNAIIMKNVAKA-LEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSN-SNRVVP 107 (269)
T ss_pred cCCceEEEEeeccccccchHHHHHHHHH-HHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhcc-CceEEE
Confidence 3567899999999887663 2333444 5 45666 4544 1111111 01244444444432 122234
Q ss_pred EEEEeChhHHHHHHHHhcChh
Q psy6856 174 SYIGHSMGTTMFYVMASMRPE 194 (370)
Q Consensus 174 ~lvGhS~GG~va~~~a~~~p~ 194 (370)
+++|||-||.+++.+|+++++
T Consensus 108 vi~gHSkGg~Vvl~ya~K~~d 128 (269)
T KOG4667|consen 108 VILGHSKGGDVVLLYASKYHD 128 (269)
T ss_pred EEEeecCccHHHHHHHHhhcC
Confidence 689999999999999999886
No 91
>KOG2931|consensus
Probab=98.57 E-value=9.1e-07 Score=79.62 Aligned_cols=113 Identities=17% Similarity=0.181 Sum_probs=81.0
Q ss_pred cceEEEEECCCCcEEEEEEEcCC--CCCCCeEEEeCCCCCChhH-hhhccc--cc--cCCcce---ecCC----------
Q psy6856 86 SSETHRTKTQDGYTLTMHRIVPK--YANSPPVLLQHGLCLASDS-WILRGQ--ED--LGNLYK---LYPK---------- 145 (370)
Q Consensus 86 ~~e~~~v~t~dG~~l~~~~i~~~--~~~~~~vlllHG~~~~~~~-w~~~~~--~~--L~~~~~---~~~~---------- 145 (370)
.+++|.|.|..|. +++ +-.| .+++|++|=.|..+-|... |..... .- +...+. ++..
T Consensus 21 ~~~e~~V~T~~G~-v~V--~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~gAp~~p 97 (326)
T KOG2931|consen 21 TCQEHDVETAHGV-VHV--TVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDGAPSFP 97 (326)
T ss_pred cceeeeecccccc-EEE--EEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccCCccCC
Confidence 4789999999884 222 2223 3358889999999999886 433321 10 222344 2221
Q ss_pred -CCCCcccccCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhccceee
Q psy6856 146 -NVNWHEHGLYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQI 203 (370)
Q Consensus 146 -~~~~~~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~ 203 (370)
++.+. ..+|+++++-.+++.++.+.++-+|--.|+.|..++|..||++|.+|+++.
T Consensus 98 ~~y~yP--smd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn 154 (326)
T KOG2931|consen 98 EGYPYP--SMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLIN 154 (326)
T ss_pred CCCCCC--CHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEe
Confidence 22222 334788899999999999999999999999999999999999999998854
No 92
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.56 E-value=7.8e-08 Score=83.52 Aligned_cols=102 Identities=15% Similarity=0.210 Sum_probs=71.5
Q ss_pred EEEECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhHhhhcccccc-CCcce---ecCC-------------CCCCccc
Q psy6856 90 HRTKTQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDSWILRGQEDL-GNLYK---LYPK-------------NVNWHEH 152 (370)
Q Consensus 90 ~~v~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~~~~~L-~~~~~---~~~~-------------~~~~~~~ 152 (370)
..+...||+.|...+.|+......-+++--+++--...++..+.. + ..||. ++++ .+++.+.
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~-a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~Dw 86 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAA-AAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDW 86 (281)
T ss_pred cccccCCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHH-hhccCceEEEEecccccCCCccccccCccchhhh
Confidence 567889999999999886433222344433444334444444444 4 56777 5555 3567788
Q ss_pred ccCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcCh
Q psy6856 153 GLYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRP 193 (370)
Q Consensus 153 ~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p 193 (370)
+..|++++++.+.+.++-.+..+||||+||.+.- ++..++
T Consensus 87 A~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~g-L~~~~~ 126 (281)
T COG4757 87 ARLDFPAALAALKKALPGHPLYFVGHSFGGQALG-LLGQHP 126 (281)
T ss_pred hhcchHHHHHHHHhhCCCCceEEeeccccceeec-ccccCc
Confidence 8899999999998888888999999999998744 344455
No 93
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=98.55 E-value=1.2e-07 Score=89.22 Aligned_cols=114 Identities=15% Similarity=0.079 Sum_probs=66.7
Q ss_pred CCcceEEEEECCCCcEEEEEE-EcC-CCCCCCeEEEeCCCCCChhHhhhccccccCCcce---ecCC-------------
Q psy6856 84 GLSSETHRTKTQDGYTLTMHR-IVP-KYANSPPVLLQHGLCLASDSWILRGQEDLGNLYK---LYPK------------- 145 (370)
Q Consensus 84 ~~~~e~~~v~t~dG~~l~~~~-i~~-~~~~~~~vlllHG~~~~~~~w~~~~~~~L~~~~~---~~~~------------- 145 (370)
+..+.++.+.+.+|..+..+. +|. ..++-|.||.+||.++....|...... -.+||. ++.+
T Consensus 53 ~~~vy~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~-a~~G~~vl~~d~rGqg~~~~d~~~~~ 131 (320)
T PF05448_consen 53 GVEVYDVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPW-AAAGYAVLAMDVRGQGGRSPDYRGSS 131 (320)
T ss_dssp SEEEEEEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHH-HHTT-EEEEE--TTTSSSS-B-SSBS
T ss_pred CEEEEEEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCccccccc-ccCCeEEEEecCCCCCCCCCCccccC
Confidence 456677888899999998655 455 345568899999999998877544321 122332 1111
Q ss_pred -----CCC-------Ccccc----cCCHHHHHHHHHHH--cCCCCEEEEEeChhHHHHHHHHhcChhhhhcc
Q psy6856 146 -----NVN-------WHEHG----LYDVPAMIDYILSV--TRRPTLSYIGHSMGTTMFYVMASMRPEYNRKI 199 (370)
Q Consensus 146 -----~~~-------~~~~~----~~D~~~~i~~l~~~--~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l 199 (370)
++. .+++. ..|...+++.+... .+.+++.+.|.|+||++++.+|+..|. |+..
T Consensus 132 ~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~r-v~~~ 202 (320)
T PF05448_consen 132 GGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPR-VKAA 202 (320)
T ss_dssp SS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST--SEE
T ss_pred CCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCcc-ccEE
Confidence 110 11110 12444555555433 345799999999999999999998763 4443
No 94
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.53 E-value=4.8e-07 Score=80.34 Aligned_cols=90 Identities=22% Similarity=0.299 Sum_probs=66.4
Q ss_pred CCeEEEeCCCCCChhHhhhcccccc---CCcce-e--cCC--CCCCc-ccccCCHHHHHHHHHHHcCCCCEEEEEeChhH
Q psy6856 112 SPPVLLQHGLCLASDSWILRGQEDL---GNLYK-L--YPK--NVNWH-EHGLYDVPAMIDYILSVTRRPTLSYIGHSMGT 182 (370)
Q Consensus 112 ~~~vlllHG~~~~~~~w~~~~~~~L---~~~~~-~--~~~--~~~~~-~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG 182 (370)
+++++++||++++...|...... + ...|+ + |.+ +.+.. ........+.+..+++.++..+++++|||+||
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg 99 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKV-LPALAARYRVIAPDLRGHGRSDPAGYSLSAYADDLAALLDALGLEKVVLVGHSMGG 99 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHH-hhccccceEEEEecccCCCCCCcccccHHHHHHHHHHHHHHhCCCceEEEEecccH
Confidence 56999999999999999884333 3 11266 4 433 22220 11222336778888999999999999999999
Q ss_pred HHHHHHHhcChhhhhcccee
Q psy6856 183 TMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 183 ~va~~~a~~~p~~v~~l~~~ 202 (370)
.+++.++.++|+.+++++++
T Consensus 100 ~~~~~~~~~~p~~~~~~v~~ 119 (282)
T COG0596 100 AVALALALRHPDRVRGLVLI 119 (282)
T ss_pred HHHHHHHHhcchhhheeeEe
Confidence 99999999999988888763
No 95
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.52 E-value=3.5e-08 Score=87.27 Aligned_cols=76 Identities=29% Similarity=0.313 Sum_probs=50.7
Q ss_pred CeEEEeCCCCC-ChhHhhhcccccc-CCcce----ecCC--CCCC----------cccccCCHHHHHHHHHHHcCCCCEE
Q psy6856 113 PPVLLQHGLCL-ASDSWILRGQEDL-GNLYK----LYPK--NVNW----------HEHGLYDVPAMIDYILSVTRRPTLS 174 (370)
Q Consensus 113 ~~vlllHG~~~-~~~~w~~~~~~~L-~~~~~----~~~~--~~~~----------~~~~~~D~~~~i~~l~~~~~~~~~~ 174 (370)
.||||+||..+ ....|..+.+. | .+||. ++.. .... .+.. ..+.+.|+.+++.+|. ||.
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~-l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~-~~l~~fI~~Vl~~TGa-kVD 78 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPY-LKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESA-KQLRAFIDAVLAYTGA-KVD 78 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHH-HHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHH-HHHHHHHHHHHHHHT---EE
T ss_pred CCEEEECCCCcchhhCHHHHHHH-HHHcCCCcceeEeccCCCCCCCCcccccccchhhH-HHHHHHHHHHHHhhCC-EEE
Confidence 58999999999 66899999998 7 67777 3322 1111 0111 2577899999999999 999
Q ss_pred EEEeChhHHHHHHHHhc
Q psy6856 175 YIGHSMGTTMFYVMASM 191 (370)
Q Consensus 175 lvGhS~GG~va~~~a~~ 191 (370)
+|||||||.++-.+...
T Consensus 79 IVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 79 IVGHSMGGTIARYYIKG 95 (219)
T ss_dssp EEEETCHHHHHHHHHHH
T ss_pred EEEcCCcCHHHHHHHHH
Confidence 99999999998887654
No 96
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.47 E-value=2.9e-06 Score=74.97 Aligned_cols=83 Identities=13% Similarity=0.104 Sum_probs=60.7
Q ss_pred CCCCeEEEeCCCCCChhHhhhccccccCCcce---ecCC--CCCCcccccCCHHHHHHHHHHHcC----CCCEEEEEeCh
Q psy6856 110 ANSPPVLLQHGLCLASDSWILRGQEDLGNLYK---LYPK--NVNWHEHGLYDVPAMIDYILSVTR----RPTLSYIGHSM 180 (370)
Q Consensus 110 ~~~~~vlllHG~~~~~~~w~~~~~~~L~~~~~---~~~~--~~~~~~~~~~D~~~~i~~l~~~~~----~~~~~lvGhS~ 180 (370)
..+.-++++|=.||++..|+.-... |..... +.+. +-...+-...|+++..+.+.+.+. .+++.++||||
T Consensus 5 ~~~~~L~cfP~AGGsa~~fr~W~~~-lp~~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d~P~alfGHSm 83 (244)
T COG3208 5 GARLRLFCFPHAGGSASLFRSWSRR-LPADIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLLDAPFALFGHSM 83 (244)
T ss_pred CCCceEEEecCCCCCHHHHHHHHhh-CCchhheeeecCCCcccccCCcccccHHHHHHHHHHHhccccCCCCeeecccch
Confidence 4566799999999999988777766 633333 3332 444455556688888888877655 25899999999
Q ss_pred hHHHHHHHHhcCh
Q psy6856 181 GTTMFYVMASMRP 193 (370)
Q Consensus 181 GG~va~~~a~~~p 193 (370)
||++|+.+|.+..
T Consensus 84 Ga~lAfEvArrl~ 96 (244)
T COG3208 84 GAMLAFEVARRLE 96 (244)
T ss_pred hHHHHHHHHHHHH
Confidence 9999999998743
No 97
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=98.47 E-value=4.6e-07 Score=91.94 Aligned_cols=109 Identities=14% Similarity=0.077 Sum_probs=73.2
Q ss_pred EECCCCcEEEEE-EEcCCCCCCCeEEEeCCCCCChh---Hhhh-cccccc-CCcce---ecCC--CCCC---c---cccc
Q psy6856 92 TKTQDGYTLTMH-RIVPKYANSPPVLLQHGLCLASD---SWIL-RGQEDL-GNLYK---LYPK--NVNW---H---EHGL 154 (370)
Q Consensus 92 v~t~dG~~l~~~-~i~~~~~~~~~vlllHG~~~~~~---~w~~-~~~~~L-~~~~~---~~~~--~~~~---~---~~~~ 154 (370)
|++.||.+|... +.|.+.++.|+||++||++.+.. .|.. .... | ++||. ++.+ +.+. . ....
T Consensus 1 i~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~-l~~~Gy~vv~~D~RG~g~S~g~~~~~~~~~~ 79 (550)
T TIGR00976 1 VPMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAW-FVAQGYAVVIQDTRGRGASEGEFDLLGSDEA 79 (550)
T ss_pred CcCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHH-HHhCCcEEEEEeccccccCCCceEecCcccc
Confidence 467899999853 45654456789999999998764 2222 2222 3 67888 4444 1111 1 1223
Q ss_pred CCHHHHHHHHHHH-cCCCCEEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 155 YDVPAMIDYILSV-TRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 155 ~D~~~~i~~l~~~-~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
.|+.+.++++..+ ....++.++|||+||.+++.+|.++|+.++.++.
T Consensus 80 ~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~ 127 (550)
T TIGR00976 80 ADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAP 127 (550)
T ss_pred hHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEee
Confidence 4777788877554 2336999999999999999999998876666654
No 98
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.45 E-value=1.2e-06 Score=78.03 Aligned_cols=114 Identities=13% Similarity=0.123 Sum_probs=74.4
Q ss_pred cceEEEEECCCCcEEEEEEEcCC--CCCCCeEEEeCCCCCChhHhhhccccccCCcce---ecCC--------------C
Q psy6856 86 SSETHRTKTQDGYTLTMHRIVPK--YANSPPVLLQHGLCLASDSWILRGQEDLGNLYK---LYPK--------------N 146 (370)
Q Consensus 86 ~~e~~~v~t~dG~~l~~~~i~~~--~~~~~~vlllHG~~~~~~~w~~~~~~~L~~~~~---~~~~--------------~ 146 (370)
++-+.+++..+|.++..|.+-.. .+.-|.||-.||.+++.+.|.....- -..||. .+.| +
T Consensus 55 e~ydvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~w-a~~Gyavf~MdvRGQg~~~~dt~~~p~~ 133 (321)
T COG3458 55 EVYDVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLHW-AVAGYAVFVMDVRGQGSSSQDTADPPGG 133 (321)
T ss_pred EEEEEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCccccccc-cccceeEEEEecccCCCccccCCCCCCC
Confidence 34445566788999998887432 25568899999999999888655432 234554 2222 0
Q ss_pred CCC------------ccc----ccCCHHHHHHHH--HHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 147 VNW------------HEH----GLYDVPAMIDYI--LSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 147 ~~~------------~~~----~~~D~~~~i~~l--~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
.+. +++ ...|+..+++.+ +...+.+++.+.|.|+||++++..|+..| +++++++
T Consensus 134 ~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~ 205 (321)
T COG3458 134 PSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVA 205 (321)
T ss_pred CcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccc
Confidence 000 011 122666677666 34456689999999999999999998877 4565544
No 99
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.45 E-value=6.4e-08 Score=86.18 Aligned_cols=88 Identities=16% Similarity=0.174 Sum_probs=54.4
Q ss_pred EEcCCCCCCCeEEEeCCCCCChhHhhhcccccc-CCcce-ecCC---CCC--Cccc-----------------ccCCHHH
Q psy6856 104 RIVPKYANSPPVLLQHGLCLASDSWILRGQEDL-GNLYK-LYPK---NVN--WHEH-----------------GLYDVPA 159 (370)
Q Consensus 104 ~i~~~~~~~~~vlllHG~~~~~~~w~~~~~~~L-~~~~~-~~~~---~~~--~~~~-----------------~~~D~~~ 159 (370)
..|.+.++.|.||++|+..|-...-....+. | .+||. +.+| ... ..+. ...|+.+
T Consensus 6 ~~P~~~~~~~~Vvv~~d~~G~~~~~~~~ad~-lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 84 (218)
T PF01738_consen 6 ARPEGGGPRPAVVVIHDIFGLNPNIRDLADR-LAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQA 84 (218)
T ss_dssp EEETTSSSEEEEEEE-BTTBS-HHHHHHHHH-HHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHH
T ss_pred EeCCCCCCCCEEEEEcCCCCCchHHHHHHHH-HHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHH
Confidence 3454434678999999999988666667777 7 67888 6666 111 1100 0112333
Q ss_pred HHHHHHHHc--CCCCEEEEEeChhHHHHHHHHhcC
Q psy6856 160 MIDYILSVT--RRPTLSYIGHSMGTTMFYVMASMR 192 (370)
Q Consensus 160 ~i~~l~~~~--~~~~~~lvGhS~GG~va~~~a~~~ 192 (370)
+++++.+.- +.+++.++|+|+||.+++.+|.+.
T Consensus 85 a~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~ 119 (218)
T PF01738_consen 85 AVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD 119 (218)
T ss_dssp HHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT
T ss_pred HHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc
Confidence 444443332 346999999999999999999886
No 100
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.43 E-value=3.6e-06 Score=81.45 Aligned_cols=52 Identities=23% Similarity=0.410 Sum_probs=40.9
Q ss_pred HHHHHHHHHcC-CCCEEEEEeChhHHHHHHHHhcChhhhhccceeeccccceeec
Q psy6856 159 AMIDYILSVTR-RPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQISLAPVAYVS 212 (370)
Q Consensus 159 ~~i~~l~~~~~-~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~aP~~~~~ 212 (370)
+.++.+.+... ..|.++||.++||..++++|+.+|+.+..+++ .-||..+..
T Consensus 127 ~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvl--aGaPlsywa 179 (581)
T PF11339_consen 127 AFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVL--AGAPLSYWA 179 (581)
T ss_pred HHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceee--cCCCccccc
Confidence 34455555543 34999999999999999999999999888874 678887765
No 101
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.41 E-value=7.3e-07 Score=76.19 Aligned_cols=86 Identities=15% Similarity=0.161 Sum_probs=50.7
Q ss_pred EEEeCCCCCChh-HhhhccccccCCcceecCCCCCCcccccCCHHHHHHHHHHHcC--CCCEEEEEeChhHHHHHHHHh-
Q psy6856 115 VLLQHGLCLASD-SWILRGQEDLGNLYKLYPKNVNWHEHGLYDVPAMIDYILSVTR--RPTLSYIGHSMGTTMFYVMAS- 190 (370)
Q Consensus 115 vlllHG~~~~~~-~w~~~~~~~L~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~--~~~~~lvGhS~GG~va~~~a~- 190 (370)
|+++||++++.. +|..-....|.+.+++...++ ..-+..+++..+.+.++ .+++++||||+|+..++.+++
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~-----~~P~~~~W~~~l~~~i~~~~~~~ilVaHSLGc~~~l~~l~~ 75 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW-----DNPDLDEWVQALDQAIDAIDEPTILVAHSLGCLTALRWLAE 75 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC-------TS--HHHHHHHHHHCCHC-TTTEEEEEETHHHHHHHHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc-----CCCCHHHHHHHHHHHHhhcCCCeEEEEeCHHHHHHHHHHhh
Confidence 689999999955 787766653544444322222 12255566666655532 256999999999999999994
Q ss_pred cChhhhhccceeeccccc
Q psy6856 191 MRPEYNRKINLQISLAPV 208 (370)
Q Consensus 191 ~~p~~v~~l~~~~~~aP~ 208 (370)
..+..+.++ +++||.
T Consensus 76 ~~~~~v~g~---lLVAp~ 90 (171)
T PF06821_consen 76 QSQKKVAGA---LLVAPF 90 (171)
T ss_dssp TCCSSEEEE---EEES--
T ss_pred cccccccEE---EEEcCC
Confidence 444444444 445554
No 102
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.39 E-value=2.5e-07 Score=84.06 Aligned_cols=111 Identities=15% Similarity=0.141 Sum_probs=67.3
Q ss_pred EEEEECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhH-hhhccccc----cCCcce---ecCC-----------CCCC
Q psy6856 89 THRTKTQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDS-WILRGQED----LGNLYK---LYPK-----------NVNW 149 (370)
Q Consensus 89 ~~~v~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~-w~~~~~~~----L~~~~~---~~~~-----------~~~~ 149 (370)
||.+.|+-|. +++.-.....+++|++|=.|-.|-|..+ |....... +.+++. ++.. ++.+
T Consensus 1 eh~v~t~~G~-v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~y 79 (283)
T PF03096_consen 1 EHDVETPYGS-VHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEGYQY 79 (283)
T ss_dssp -EEEEETTEE-EEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT---
T ss_pred CceeccCceE-EEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccccccc
Confidence 5788899883 4432222222358999999999998887 54433211 233443 3322 1111
Q ss_pred cccccCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhcccee
Q psy6856 150 HEHGLYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 150 ~~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
-..+++++++..+++.++++.++-+|--.|+.|...+|..||++|.+++++
T Consensus 80 --Psmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLv 130 (283)
T PF03096_consen 80 --PSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILV 130 (283)
T ss_dssp ----HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEE
T ss_pred --cCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEE
Confidence 122356668889999999999999999999999999999999999998874
No 103
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.34 E-value=9.2e-07 Score=91.27 Aligned_cols=102 Identities=16% Similarity=0.135 Sum_probs=66.9
Q ss_pred EEEEECCCCcEEEEEEEcCC-------CCCCCeEEEeCCCCCChhHhhhcccccc-CCcce-ecCC----CCC-Cc----
Q psy6856 89 THRTKTQDGYTLTMHRIVPK-------YANSPPVLLQHGLCLASDSWILRGQEDL-GNLYK-LYPK----NVN-WH---- 150 (370)
Q Consensus 89 ~~~v~t~dG~~l~~~~i~~~-------~~~~~~vlllHG~~~~~~~w~~~~~~~L-~~~~~-~~~~----~~~-~~---- 150 (370)
...+.+.||.++.+.+...| ....|+||++||++++...|..+.+. | .++|+ +.+| +.+ +.
T Consensus 419 p~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~-La~~Gy~VIaiDlpGHG~S~~~~~~~ 497 (792)
T TIGR03502 419 PVLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGT-LAAAGVATIAIDHPLHGARSFDANAS 497 (792)
T ss_pred ceEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHH-HHhCCcEEEEeCCCCCCccccccccc
Confidence 34667888877766553222 12346899999999999999999998 8 46888 4444 111 11
Q ss_pred -------ccc-----------cCCHHHHHHHH---HHHcC----------------CCCEEEEEeChhHHHHHHHHhc
Q psy6856 151 -------EHG-----------LYDVPAMIDYI---LSVTR----------------RPTLSYIGHSMGTTMFYVMASM 191 (370)
Q Consensus 151 -------~~~-----------~~D~~~~i~~l---~~~~~----------------~~~~~lvGhS~GG~va~~~a~~ 191 (370)
... .+.+.+.+..+ +..++ ..+++++||||||.++..++..
T Consensus 498 ~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 498 GVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred cccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 110 12344433333 33333 4599999999999999999976
No 104
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.31 E-value=2.4e-06 Score=78.47 Aligned_cols=97 Identities=16% Similarity=0.179 Sum_probs=64.9
Q ss_pred CCeEEEeCCCCCChhHhhhcccccc----CCcce-ecCC--CCCC--------cccccCCHHHHHHHHHHH-------c-
Q psy6856 112 SPPVLLQHGLCLASDSWILRGQEDL----GNLYK-LYPK--NVNW--------HEHGLYDVPAMIDYILSV-------T- 168 (370)
Q Consensus 112 ~~~vlllHG~~~~~~~w~~~~~~~L----~~~~~-~~~~--~~~~--------~~~~~~D~~~~i~~l~~~-------~- 168 (370)
+..+|++.|++|-.+-|...... | ..++. +... +.+. .+...+++.+.|+...+. .
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~-L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~ 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSA-LYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKN 80 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHH-HHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhc
Confidence 45789999999999999888777 6 23344 2221 1111 123456777766654322 2
Q ss_pred -CCCCEEEEEeChhHHHHHHHHhcChhhhhccceeeccccce
Q psy6856 169 -RRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQISLAPVA 209 (370)
Q Consensus 169 -~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~aP~~ 209 (370)
...+++++|||.|+.+++.++.+.++...++..++++-|..
T Consensus 81 ~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 81 KPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 45689999999999999999999983334555556666654
No 105
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.22 E-value=1.9e-06 Score=76.46 Aligned_cols=81 Identities=16% Similarity=0.325 Sum_probs=43.4
Q ss_pred CCCeEEEeCCCCCChhHhhhcccccc----CC-cce---ec----C----------------C-----CCCCc-----cc
Q psy6856 111 NSPPVLLQHGLCLASDSWILRGQEDL----GN-LYK---LY----P----------------K-----NVNWH-----EH 152 (370)
Q Consensus 111 ~~~~vlllHG~~~~~~~w~~~~~~~L----~~-~~~---~~----~----------------~-----~~~~~-----~~ 152 (370)
.++-||+|||++.|+..+...... | +. ++. ++ . . .++|- +.
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~-l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSA-LRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHH-HHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHH-HHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 457799999999999998888776 5 33 343 11 1 0 11111 11
Q ss_pred ccCCHHHHHHHHHHHcCC--CCEEEEEeChhHHHHHHHHhcC
Q psy6856 153 GLYDVPAMIDYILSVTRR--PTLSYIGHSMGTTMFYVMASMR 192 (370)
Q Consensus 153 ~~~D~~~~i~~l~~~~~~--~~~~lvGhS~GG~va~~~a~~~ 192 (370)
...++.+.++++.+.+.. .=.-++|+|+||++|..++...
T Consensus 82 ~~~~~~~sl~~l~~~i~~~GPfdGvlGFSQGA~lAa~ll~~~ 123 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENGPFDGVLGFSQGAALAALLLALQ 123 (212)
T ss_dssp GG---HHHHHHHHHHHHHH---SEEEEETHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHhcCCeEEEEeecHHHHHHHHHHHHH
Confidence 233566666666554322 1356999999999999988764
No 106
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.21 E-value=8.9e-06 Score=78.36 Aligned_cols=121 Identities=11% Similarity=0.001 Sum_probs=68.7
Q ss_pred CCcceEEEEECCCCcEEEEEEEcCCCC--C-CCeEEEeCCCCCChhHh-hhcccccc-CCcce---ecCCCCC-----Cc
Q psy6856 84 GLSSETHRTKTQDGYTLTMHRIVPKYA--N-SPPVLLQHGLCLASDSW-ILRGQEDL-GNLYK---LYPKNVN-----WH 150 (370)
Q Consensus 84 ~~~~e~~~v~t~dG~~l~~~~i~~~~~--~-~~~vlllHG~~~~~~~w-~~~~~~~L-~~~~~---~~~~~~~-----~~ 150 (370)
..++++..|-..+-..|.-+ -+.... . .||||++--+.+.-... +...+. | . ++. +|..+.+ ..
T Consensus 72 ~~~v~e~vV~~~~~~~L~~y-~~~~~~~~~~~~pvLiV~Pl~g~~~~L~RS~V~~-Ll~-g~dVYl~DW~~p~~vp~~~~ 148 (406)
T TIGR01849 72 DVPIRERVVWDKPFCRLIHF-KRQGFRAELPGPAVLIVAPMSGHYATLLRSTVEA-LLP-DHDVYITDWVNARMVPLSAG 148 (406)
T ss_pred EeeeEEEEEEECCCeEEEEE-CCCCcccccCCCcEEEEcCCchHHHHHHHHHHHH-HhC-CCcEEEEeCCCCCCCchhcC
Confidence 34666655655554433322 222111 1 37999999877655543 222333 3 5 776 3433222 22
Q ss_pred ccccCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcC-----hhhhhccceeecccccee
Q psy6856 151 EHGLYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMR-----PEYNRKINLQISLAPVAY 210 (370)
Q Consensus 151 ~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~-----p~~v~~l~~~~~~aP~~~ 210 (370)
.+..+|+.+.+...++.+|.+ ++++|+||||..++.+++.+ |+.+++++++ .+|..+
T Consensus 149 ~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm--~~PID~ 210 (406)
T TIGR01849 149 KFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLM--GGPIDA 210 (406)
T ss_pred CCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEE--ecCccC
Confidence 333344444555556778876 99999999999988776655 5456676653 345544
No 107
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.20 E-value=6.4e-06 Score=73.57 Aligned_cols=88 Identities=14% Similarity=0.047 Sum_probs=58.8
Q ss_pred CeEEEeCCCCCChhHhhhccccccCCc-ce---ecCCCCCCcccccCCHHHHHH----HHHHHcCCCCEEEEEeChhHHH
Q psy6856 113 PPVLLQHGLCLASDSWILRGQEDLGNL-YK---LYPKNVNWHEHGLYDVPAMID----YILSVTRRPTLSYIGHSMGTTM 184 (370)
Q Consensus 113 ~~vlllHG~~~~~~~w~~~~~~~L~~~-~~---~~~~~~~~~~~~~~D~~~~i~----~l~~~~~~~~~~lvGhS~GG~v 184 (370)
+||+++||.+|+...|...++. |... +. +...+....+....++.+.++ .+.......++.|+|||+||.+
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~-l~~~~~~v~~i~~~~~~~~~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~l 79 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARA-LPDDVIGVYGIEYPGRGDDEPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGGIL 79 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHH-HTTTEEEEEEECSTTSCTTSHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHh-CCCCeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccHHH
Confidence 4799999999999999999998 8765 55 443333222222234444444 3333344459999999999999
Q ss_pred HHHHHhcChh---hhhccce
Q psy6856 185 FYVMASMRPE---YNRKINL 201 (370)
Q Consensus 185 a~~~a~~~p~---~v~~l~~ 201 (370)
|+.+|.+--+ .+..+++
T Consensus 80 A~E~A~~Le~~G~~v~~l~l 99 (229)
T PF00975_consen 80 AFEMARQLEEAGEEVSRLIL 99 (229)
T ss_dssp HHHHHHHHHHTT-SESEEEE
T ss_pred HHHHHHHHHHhhhccCceEE
Confidence 9999976333 2445554
No 108
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.15 E-value=6.5e-06 Score=71.24 Aligned_cols=74 Identities=15% Similarity=0.195 Sum_probs=48.0
Q ss_pred EEEeCCCCCChhHhhhccccc-cCC---cce-ecCC-CCCCcccccCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHH
Q psy6856 115 VLLQHGLCLASDSWILRGQED-LGN---LYK-LYPK-NVNWHEHGLYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVM 188 (370)
Q Consensus 115 vlllHG~~~~~~~w~~~~~~~-L~~---~~~-~~~~-~~~~~~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~ 188 (370)
++++|||.+|..+.....-.. +.+ ... .+++ ...++ ++.+.++.+++....+.+.|||.||||..|..+
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~~p~-----~a~~~l~~~i~~~~~~~~~liGSSlGG~~A~~L 76 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPPFPE-----EAIAQLEQLIEELKPENVVLIGSSLGGFYATYL 76 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCcCHH-----HHHHHHHHHHHhCCCCCeEEEEEChHHHHHHHH
Confidence 789999999998754432110 211 112 3333 21111 233466677777777779999999999999999
Q ss_pred HhcCh
Q psy6856 189 ASMRP 193 (370)
Q Consensus 189 a~~~p 193 (370)
|.+++
T Consensus 77 a~~~~ 81 (187)
T PF05728_consen 77 AERYG 81 (187)
T ss_pred HHHhC
Confidence 98875
No 109
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.12 E-value=5.4e-06 Score=73.65 Aligned_cols=102 Identities=19% Similarity=0.215 Sum_probs=74.1
Q ss_pred CCCCCeEEEeCCCCCChhHhhhcccccc-CCcce-ecCC---CCCCccccc-CCHHHHHHHHHHHc----------CCCC
Q psy6856 109 YANSPPVLLQHGLCLASDSWILRGQEDL-GNLYK-LYPK---NVNWHEHGL-YDVPAMIDYILSVT----------RRPT 172 (370)
Q Consensus 109 ~~~~~~vlllHG~~~~~~~w~~~~~~~L-~~~~~-~~~~---~~~~~~~~~-~D~~~~i~~l~~~~----------~~~~ 172 (370)
.+.-|.|+|+||+.-....|..+... + .+||- ++++ ....+.... .+.+..++++...+ +..+
T Consensus 43 ~G~yPVilF~HG~~l~ns~Ys~lL~H-IASHGfIVVAPQl~~~~~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~k 121 (307)
T PF07224_consen 43 AGTYPVILFLHGFNLYNSFYSQLLAH-IASHGFIVVAPQLYTLFPPDGQDEIKSAASVINWLPEGLQHVLPENVEANLSK 121 (307)
T ss_pred CCCccEEEEeechhhhhHHHHHHHHH-HhhcCeEEEechhhcccCCCchHHHHHHHHHHHHHHhhhhhhCCCCcccccce
Confidence 46678999999999998888888877 7 67888 7776 222222221 35666777774442 4579
Q ss_pred EEEEEeChhHHHHHHHHhcChhhhhccceeeccccceeec
Q psy6856 173 LSYIGHSMGTTMFYVMASMRPEYNRKINLQISLAPVAYVS 212 (370)
Q Consensus 173 ~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~aP~~~~~ 212 (370)
+.++|||.||-.|+++|..+. ..-++..+|++-|+....
T Consensus 122 lal~GHSrGGktAFAlALg~a-~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 122 LALSGHSRGGKTAFALALGYA-TSLKFSALIGIDPVAGTS 160 (307)
T ss_pred EEEeecCCccHHHHHHHhccc-ccCchhheecccccCCCC
Confidence 999999999999999999875 334666667888887654
No 110
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.07 E-value=6.6e-05 Score=66.17 Aligned_cols=102 Identities=17% Similarity=0.259 Sum_probs=66.0
Q ss_pred eEEEEECCCCcEEEEEEEcCC---CCCCCeEEEeCCCCCChhHhhhcccccc-CCcce-ecCC--------CCCCccccc
Q psy6856 88 ETHRTKTQDGYTLTMHRIVPK---YANSPPVLLQHGLCLASDSWILRGQEDL-GNLYK-LYPK--------NVNWHEHGL 154 (370)
Q Consensus 88 e~~~v~t~dG~~l~~~~i~~~---~~~~~~vlllHG~~~~~~~w~~~~~~~L-~~~~~-~~~~--------~~~~~~~~~ 154 (370)
.+|.+..+||..+.+|.-++. ....++||+..|++...+++..++.. | .+|++ +-+| +.+..++..
T Consensus 3 idhvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~Y-L~~NGFhViRyDsl~HvGlSsG~I~eftm 81 (294)
T PF02273_consen 3 IDHVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEY-LSANGFHVIRYDSLNHVGLSSGDINEFTM 81 (294)
T ss_dssp EEEEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHH-HHTTT--EEEE---B-------------H
T ss_pred ccceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHH-HhhCCeEEEeccccccccCCCCChhhcch
Confidence 467888999999998776533 22458999999999999999999999 8 88998 5554 333444433
Q ss_pred ----CCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhc
Q psy6856 155 ----YDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASM 191 (370)
Q Consensus 155 ----~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~ 191 (370)
.|+...++++. ..|.+++-|+.-|+.|.+|+..|++
T Consensus 82 s~g~~sL~~V~dwl~-~~g~~~~GLIAaSLSaRIAy~Va~~ 121 (294)
T PF02273_consen 82 SIGKASLLTVIDWLA-TRGIRRIGLIAASLSARIAYEVAAD 121 (294)
T ss_dssp HHHHHHHHHHHHHHH-HTT---EEEEEETTHHHHHHHHTTT
T ss_pred HHhHHHHHHHHHHHH-hcCCCcchhhhhhhhHHHHHHHhhc
Confidence 35555666654 7799999999999999999999986
No 111
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.03 E-value=7.4e-06 Score=75.25 Aligned_cols=103 Identities=16% Similarity=0.155 Sum_probs=55.8
Q ss_pred CCCeEEEeCCCCCChhH---hhhcccccc-CCcce-ecCC------CCCCcccc--cCCHHHHHHHHHHHc----CCCCE
Q psy6856 111 NSPPVLLQHGLCLASDS---WILRGQEDL-GNLYK-LYPK------NVNWHEHG--LYDVPAMIDYILSVT----RRPTL 173 (370)
Q Consensus 111 ~~~~vlllHG~~~~~~~---w~~~~~~~L-~~~~~-~~~~------~~~~~~~~--~~D~~~~i~~l~~~~----~~~~~ 173 (370)
....|||+-|++..-.+ ...++.. | ..+|+ +.+. +|....+. ..|+.+.|+++...- +.++|
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~a-L~~~~wsl~q~~LsSSy~G~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~~kI 110 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEA-LEETGWSLFQVQLSSSYSGWGTSSLDRDVEEIAQLVEYLRSEKGGHFGREKI 110 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHH-HT-TT-EEEEE--GGGBTTS-S--HHHHHHHHHHHHHHHHHHS------S-E
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHH-hccCCeEEEEEEecCccCCcCcchhhhHHHHHHHHHHHHHHhhccccCCccE
Confidence 55689999999887665 2233333 5 45788 3333 33332222 236677777776663 57899
Q ss_pred EEEEeChhHHHHHHHHhcChh--hhhccceeeccccceeecCC
Q psy6856 174 SYIGHSMGTTMFYVMASMRPE--YNRKINLQISLAPVAYVSRM 214 (370)
Q Consensus 174 ~lvGhS~GG~va~~~a~~~p~--~v~~l~~~~~~aP~~~~~~~ 214 (370)
+|+|||-|..-++.|+..... ....|..+|+-||+...+..
T Consensus 111 VLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~ 153 (303)
T PF08538_consen 111 VLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAI 153 (303)
T ss_dssp EEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTST
T ss_pred EEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHh
Confidence 999999999999999886432 12445556677887765544
No 112
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.01 E-value=1.8e-06 Score=78.27 Aligned_cols=83 Identities=14% Similarity=0.162 Sum_probs=50.4
Q ss_pred CCCCeEEEeCCCCCChhHhhhccccccC--Ccce-------ecCC--------------------CCCCcc-cccC----
Q psy6856 110 ANSPPVLLQHGLCLASDSWILRGQEDLG--NLYK-------LYPK--------------------NVNWHE-HGLY---- 155 (370)
Q Consensus 110 ~~~~~vlllHG~~~~~~~w~~~~~~~L~--~~~~-------~~~~--------------------~~~~~~-~~~~---- 155 (370)
....|.||+||++++...+..++.. +. ++.. ++.+ .|.... -...
T Consensus 9 ~~~tPTifihG~~gt~~s~~~mi~~-~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 9 QSTTPTIFIHGYGGTANSFNHMINR-LENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp -S-EEEEEE--TTGGCCCCHHHHHH-HHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred cCCCcEEEECCCCCChhHHHHHHHH-HHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 3457899999999999988888877 62 3332 2222 111111 0011
Q ss_pred CHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcCh
Q psy6856 156 DVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRP 193 (370)
Q Consensus 156 D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p 193 (370)
-+.+++.++.++.+++++.+|||||||..++.++..+.
T Consensus 88 wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~ 125 (255)
T PF06028_consen 88 WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYG 125 (255)
T ss_dssp HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhc
Confidence 13345555566679999999999999999999988753
No 113
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.00 E-value=5.5e-06 Score=73.77 Aligned_cols=79 Identities=16% Similarity=0.151 Sum_probs=44.8
Q ss_pred CCCeEEEeCCCCCChhHhhhccccccCC---cce---ecCCCCC-CcccccCCHHH----HHHHHHHH---cCC--CCEE
Q psy6856 111 NSPPVLLQHGLCLASDSWILRGQEDLGN---LYK---LYPKNVN-WHEHGLYDVPA----MIDYILSV---TRR--PTLS 174 (370)
Q Consensus 111 ~~~~vlllHG~~~~~~~w~~~~~~~L~~---~~~---~~~~~~~-~~~~~~~D~~~----~i~~l~~~---~~~--~~~~ 174 (370)
+...||++||+.|+..+|...... +.. .+. +....+. .......++.. .++++.+. ... .++.
T Consensus 3 ~~hLvV~vHGL~G~~~d~~~~~~~-l~~~~~~~~~~~i~~~~~~~n~~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~Is 81 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMRYLKNH-LEKIPEDLPNARIVVLGYSNNEFKTFDGIDVCGERLAEEILEHIKDYESKIRKIS 81 (217)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHH-HHHhhhhcchhhhhhhcccccccccchhhHHHHHHHHHHHHHhccccccccccce
Confidence 446799999999999999777665 522 222 1111000 00011112222 22333332 233 4899
Q ss_pred EEEeChhHHHHHHHHh
Q psy6856 175 YIGHSMGTTMFYVMAS 190 (370)
Q Consensus 175 lvGhS~GG~va~~~a~ 190 (370)
+|||||||.++-.+..
T Consensus 82 fIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 82 FIGHSLGGLIARYALG 97 (217)
T ss_pred EEEecccHHHHHHHHH
Confidence 9999999999875544
No 114
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=97.96 E-value=7e-06 Score=77.36 Aligned_cols=113 Identities=19% Similarity=0.226 Sum_probs=63.4
Q ss_pred HHHcCCcceEEEEECCCCcEEEEE-EEcCC-CCCCCeEEEeCCCCCChhHhhhc------------------ccccc-CC
Q psy6856 80 LRKWGLSSETHRTKTQDGYTLTMH-RIVPK-YANSPPVLLQHGLCLASDSWILR------------------GQEDL-GN 138 (370)
Q Consensus 80 ~~~~~~~~e~~~v~t~dG~~l~~~-~i~~~-~~~~~~vlllHG~~~~~~~w~~~------------------~~~~L-~~ 138 (370)
.+..||..|...+.+.++..+..+ .+|.+ .++.|.||++||-++........ +.. | .+
T Consensus 81 eqrdGY~~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~-LAk~ 159 (390)
T PF12715_consen 81 EQRDGYTREKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQ-LAKR 159 (390)
T ss_dssp EEETTEEEEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHH-HHTT
T ss_pred EecCCeEEEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHH-HHhC
Confidence 345688888888988888888754 66766 45668999999988876442111 111 2 66
Q ss_pred cce-ecCC--C-----------------------------CCCcccccCCHHHHHHHH--HHHcCCCCEEEEEeChhHHH
Q psy6856 139 LYK-LYPK--N-----------------------------VNWHEHGLYDVPAMIDYI--LSVTRRPTLSYIGHSMGTTM 184 (370)
Q Consensus 139 ~~~-~~~~--~-----------------------------~~~~~~~~~D~~~~i~~l--~~~~~~~~~~lvGhS~GG~v 184 (370)
||- +++| . .++..+..+|....++++ +...+.++|.++|+||||..
T Consensus 160 GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~ 239 (390)
T PF12715_consen 160 GYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYR 239 (390)
T ss_dssp TSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHH
T ss_pred CCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHH
Confidence 777 6655 0 000011112222334444 22245579999999999999
Q ss_pred HHHHHhcCh
Q psy6856 185 FYVMASMRP 193 (370)
Q Consensus 185 a~~~a~~~p 193 (370)
++.+|+..+
T Consensus 240 a~~LaALDd 248 (390)
T PF12715_consen 240 AWWLAALDD 248 (390)
T ss_dssp HHHHHHH-T
T ss_pred HHHHHHcch
Confidence 999999854
No 115
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=97.96 E-value=4.3e-05 Score=62.93 Aligned_cols=89 Identities=16% Similarity=-0.012 Sum_probs=54.5
Q ss_pred CCeEEEeCCCCCChhHh--hhcccccc-CCcce-----ecCC---------CCCCcccccCCHHHHHHHHHHHcCCCCEE
Q psy6856 112 SPPVLLQHGLCLASDSW--ILRGQEDL-GNLYK-----LYPK---------NVNWHEHGLYDVPAMIDYILSVTRRPTLS 174 (370)
Q Consensus 112 ~~~vlllHG~~~~~~~w--~~~~~~~L-~~~~~-----~~~~---------~~~~~~~~~~D~~~~i~~l~~~~~~~~~~ 174 (370)
.-+|||-||-+++.++= ...... | ..|+. +.+. ..+............+.++...+.-.+++
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~-la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi 92 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAA-LARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLI 92 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHH-HHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCcee
Confidence 34688889999998752 333333 4 44444 2221 11122222223445666676666667999
Q ss_pred EEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 175 YIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 175 lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
+=||||||.++-+.|..-...++.+++
T Consensus 93 ~GGkSmGGR~aSmvade~~A~i~~L~c 119 (213)
T COG3571 93 IGGKSMGGRVASMVADELQAPIDGLVC 119 (213)
T ss_pred eccccccchHHHHHHHhhcCCcceEEE
Confidence 999999999999988764433566655
No 116
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=97.95 E-value=0.00012 Score=61.43 Aligned_cols=89 Identities=19% Similarity=0.241 Sum_probs=53.3
Q ss_pred CeEEEeCCCCCChh-HhhhccccccCCcceecCCCCCCcccccCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhc
Q psy6856 113 PPVLLQHGLCLASD-SWILRGQEDLGNLYKLYPKNVNWHEHGLYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASM 191 (370)
Q Consensus 113 ~~vlllHG~~~~~~-~w~~~~~~~L~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~ 191 (370)
+.+|++||..+|.. +|......+|.+-.++..+ +++.-...|+.+.++.-+... .+++++|+||+|+..++.++.+
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~a~rveq~--~w~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~~v~h~~~~ 79 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPNARRVEQD--DWEAPVLDDWIARLEKEVNAA-EGPVVLVAHSLGCATVAHWAEH 79 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCccchhcccC--CCCCCCHHHHHHHHHHHHhcc-CCCeEEEEecccHHHHHHHHHh
Confidence 46899999999876 6766655422211112211 222222334444555444444 3569999999999999999987
Q ss_pred Chhhhhccceeecccc
Q psy6856 192 RPEYNRKINLQISLAP 207 (370)
Q Consensus 192 ~p~~v~~l~~~~~~aP 207 (370)
....|.+. .++||
T Consensus 80 ~~~~V~Ga---lLVAp 92 (181)
T COG3545 80 IQRQVAGA---LLVAP 92 (181)
T ss_pred hhhccceE---EEecC
Confidence 55444443 34454
No 117
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.94 E-value=6e-05 Score=68.36 Aligned_cols=116 Identities=16% Similarity=0.115 Sum_probs=71.9
Q ss_pred EEEEECCCCcEEEEEEEcCCCC-CCCeEEEeCCCCCChhHhhhcc--cccc--CCcce-ecCC-------------CCCC
Q psy6856 89 THRTKTQDGYTLTMHRIVPKYA-NSPPVLLQHGLCLASDSWILRG--QEDL--GNLYK-LYPK-------------NVNW 149 (370)
Q Consensus 89 ~~~v~t~dG~~l~~~~i~~~~~-~~~~vlllHG~~~~~~~w~~~~--~~~L--~~~~~-~~~~-------------~~~~ 149 (370)
..++...++.+-..++.|.+.+ +.|.||++||-.++........ .. | .+++- +-|+ .+.+
T Consensus 37 ~~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~-lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p 115 (312)
T COG3509 37 VASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDA-LADREGFLVAYPDGYDRAWNANGCGNWFGP 115 (312)
T ss_pred ccccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhh-hhcccCcEEECcCccccccCCCcccccCCc
Confidence 3334443333223455565533 4478999999999988544333 22 2 23333 2222 1112
Q ss_pred cc--cccC---CHHHHHHHHHHHcCCC--CEEEEEeChhHHHHHHHHhcChhhhhccceeecc
Q psy6856 150 HE--HGLY---DVPAMIDYILSVTRRP--TLSYIGHSMGTTMFYVMASMRPEYNRKINLQISL 205 (370)
Q Consensus 150 ~~--~~~~---D~~~~i~~l~~~~~~~--~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~ 205 (370)
++ -... ++.+.++.+..+.+++ +|++.|.|-||.++..+++++|+....+..+..+
T Consensus 116 ~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~ 178 (312)
T COG3509 116 ADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGL 178 (312)
T ss_pred ccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeecc
Confidence 21 1111 4566777778888886 8999999999999999999999988777664433
No 118
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.92 E-value=3e-05 Score=69.98 Aligned_cols=106 Identities=20% Similarity=0.238 Sum_probs=68.8
Q ss_pred EEcCCCCCCCeEEEeCCCCCChhHhhhcccccc-CCcce-ecCCCCCCc----ccccCCHHHHHHHHHHHc---------
Q psy6856 104 RIVPKYANSPPVLLQHGLCLASDSWILRGQEDL-GNLYK-LYPKNVNWH----EHGLYDVPAMIDYILSVT--------- 168 (370)
Q Consensus 104 ~i~~~~~~~~~vlllHG~~~~~~~w~~~~~~~L-~~~~~-~~~~~~~~~----~~~~~D~~~~i~~l~~~~--------- 168 (370)
..|...+.=|+|||+||+.-....|..+..+ + .+||- +.++-+... .....++.+.++++.+.+
T Consensus 9 ~~P~~~g~yPVv~f~~G~~~~~s~Ys~ll~h-vAShGyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~ 87 (259)
T PF12740_consen 9 YYPSSAGTYPVVLFLHGFLLINSWYSQLLEH-VASHGYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGVK 87 (259)
T ss_pred EecCCCCCcCEEEEeCCcCCCHHHHHHHHHH-HHhCceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhcccccc
Confidence 3455456679999999999666666666666 7 77898 666611111 111224555666654431
Q ss_pred -CCCCEEEEEeChhHHHHHHHHhcChh--hhhccceeecccccee
Q psy6856 169 -RRPTLSYIGHSMGTTMFYVMASMRPE--YNRKINLQISLAPVAY 210 (370)
Q Consensus 169 -~~~~~~lvGhS~GG~va~~~a~~~p~--~v~~l~~~~~~aP~~~ 210 (370)
+..++.+.|||.||-+|+.++..+-+ .-.++..++++.|+..
T Consensus 88 ~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 88 PDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDG 132 (259)
T ss_pred ccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccc
Confidence 45689999999999999999988621 1123444567777764
No 119
>KOG2565|consensus
Probab=97.88 E-value=6.2e-05 Score=70.01 Aligned_cols=105 Identities=17% Similarity=0.235 Sum_probs=76.0
Q ss_pred CCcEEEEEEEcCC----CCCCCeEEEeCCCCCChhHhhhcccccc--C--Cc----ce---ecCC--CCCCcccc-----
Q psy6856 96 DGYTLTMHRIVPK----YANSPPVLLQHGLCLASDSWILRGQEDL--G--NL----YK---LYPK--NVNWHEHG----- 153 (370)
Q Consensus 96 dG~~l~~~~i~~~----~~~~~~vlllHG~~~~~~~w~~~~~~~L--~--~~----~~---~~~~--~~~~~~~~----- 153 (370)
.|..++..++..+ .....|+|++||++||-..+...++- | . ++ |. ++|. ++.|.+-.
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPl-LT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GF 210 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPL-LTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGF 210 (469)
T ss_pred cceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhh-hcCccccCCccceeEEEeccCCCCcccCcCCccCCc
Confidence 5766665554322 12346899999999999999999998 7 1 11 22 4554 55554432
Q ss_pred -cCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 154 -LYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 154 -~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
..-.+..+..++-++|..++++=|-.||..|+..+|..+|+.|.++-+
T Consensus 211 n~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHl 259 (469)
T KOG2565|consen 211 NAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHL 259 (469)
T ss_pred cHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhh
Confidence 112344666778889999999999999999999999999999887754
No 120
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=97.86 E-value=2.5e-05 Score=87.26 Aligned_cols=91 Identities=12% Similarity=0.023 Sum_probs=61.1
Q ss_pred CCCCeEEEeCCCCCChhHhhhccccccCCcce-ecCC--CCCCcccccCCHH---HHHHHHHHHcC-CCCEEEEEeChhH
Q psy6856 110 ANSPPVLLQHGLCLASDSWILRGQEDLGNLYK-LYPK--NVNWHEHGLYDVP---AMIDYILSVTR-RPTLSYIGHSMGT 182 (370)
Q Consensus 110 ~~~~~vlllHG~~~~~~~w~~~~~~~L~~~~~-~~~~--~~~~~~~~~~D~~---~~i~~l~~~~~-~~~~~lvGhS~GG 182 (370)
+.+++++++||++++...|....+. |..++. +.++ +....+...+++. +.+...++.+. ..+++++|||+||
T Consensus 1066 ~~~~~l~~lh~~~g~~~~~~~l~~~-l~~~~~v~~~~~~g~~~~~~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~Gg 1144 (1296)
T PRK10252 1066 GDGPTLFCFHPASGFAWQFSVLSRY-LDPQWSIYGIQSPRPDGPMQTATSLDEVCEAHLATLLEQQPHGPYHLLGYSLGG 1144 (1296)
T ss_pred CCCCCeEEecCCCCchHHHHHHHHh-cCCCCcEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCEEEEEechhh
Confidence 3468899999999999999999998 866666 3333 2211111223444 34434444433 3589999999999
Q ss_pred HHHHHHHhcC---hhhhhccce
Q psy6856 183 TMFYVMASMR---PEYNRKINL 201 (370)
Q Consensus 183 ~va~~~a~~~---p~~v~~l~~ 201 (370)
.+|..+|.+. ++.+..+++
T Consensus 1145 ~vA~e~A~~l~~~~~~v~~l~l 1166 (1296)
T PRK10252 1145 TLAQGIAARLRARGEEVAFLGL 1166 (1296)
T ss_pred HHHHHHHHHHHHcCCceeEEEE
Confidence 9999999864 445555554
No 121
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=97.86 E-value=1.9e-05 Score=77.20 Aligned_cols=75 Identities=12% Similarity=0.095 Sum_probs=54.7
Q ss_pred CCChhHhhhcccccc-CCcce--ecCC--CCCCccc-----ccCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhc
Q psy6856 122 CLASDSWILRGQEDL-GNLYK--LYPK--NVNWHEH-----GLYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASM 191 (370)
Q Consensus 122 ~~~~~~w~~~~~~~L-~~~~~--~~~~--~~~~~~~-----~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~ 191 (370)
..+...|..+++. | ..||. .+.. .+++... ...++.+.++.+.+..+.++++++||||||.++..++..
T Consensus 104 ~~~~~~~~~li~~-L~~~GY~~~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 104 LDEVYYFHDMIEQ-LIKWGYKEGKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred cchHHHHHHHHHH-HHHcCCccCCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHH
Confidence 3567889999998 8 66776 3322 3333321 123667777777788888999999999999999999998
Q ss_pred Chhhhh
Q psy6856 192 RPEYNR 197 (370)
Q Consensus 192 ~p~~v~ 197 (370)
+|+..+
T Consensus 183 ~p~~~~ 188 (440)
T PLN02733 183 HSDVFE 188 (440)
T ss_pred CCHhHH
Confidence 887543
No 122
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.82 E-value=0.00012 Score=62.30 Aligned_cols=104 Identities=20% Similarity=0.202 Sum_probs=66.2
Q ss_pred EEEEECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhHhhh-c----ccccc-CCcce---ecCC-----CCCCcc-cc
Q psy6856 89 THRTKTQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDSWIL-R----GQEDL-GNLYK---LYPK-----NVNWHE-HG 153 (370)
Q Consensus 89 ~~~v~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~-~----~~~~L-~~~~~---~~~~-----~~~~~~-~~ 153 (370)
++.+.-.-| ++...+.|...+..|..|++|-.+-..++... + ... | +.||. ++++ ..+++. ++
T Consensus 6 ~v~i~Gp~G-~le~~~~~~~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~-l~~~G~atlRfNfRgVG~S~G~fD~GiG 83 (210)
T COG2945 6 TVIINGPAG-RLEGRYEPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARA-LVKRGFATLRFNFRGVGRSQGEFDNGIG 83 (210)
T ss_pred cEEecCCcc-cceeccCCCCCCCCceEEecCCCccccCccCCHHHHHHHHH-HHhCCceEEeecccccccccCcccCCcc
Confidence 333433333 24555555444667888899976655554321 1 222 3 66777 5555 122221 12
Q ss_pred -cCCHHHHHHHHHHHcCCCCE-EEEEeChhHHHHHHHHhcChh
Q psy6856 154 -LYDVPAMIDYILSVTRRPTL-SYIGHSMGTTMFYVMASMRPE 194 (370)
Q Consensus 154 -~~D~~~~i~~l~~~~~~~~~-~lvGhS~GG~va~~~a~~~p~ 194 (370)
..|+.++++++.++....+. .+.|.|.|+.|++.+|.+.|+
T Consensus 84 E~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e 126 (210)
T COG2945 84 ELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPE 126 (210)
T ss_pred hHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhccc
Confidence 34999999999888765555 789999999999999999886
No 123
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=97.77 E-value=0.00023 Score=66.87 Aligned_cols=83 Identities=18% Similarity=0.133 Sum_probs=53.9
Q ss_pred CCCCeEEEeCCCCCChhH---hhhcccccc--CCcce---ecCC---CCCCcccccCCHHHHHHHHHHHc-----CCCCE
Q psy6856 110 ANSPPVLLQHGLCLASDS---WILRGQEDL--GNLYK---LYPK---NVNWHEHGLYDVPAMIDYILSVT-----RRPTL 173 (370)
Q Consensus 110 ~~~~~vlllHG~~~~~~~---w~~~~~~~L--~~~~~---~~~~---~~~~~~~~~~D~~~~i~~l~~~~-----~~~~~ 173 (370)
...|+||++||.+-.... ....... + ..|+. ++|+ ..++.. ...|+.+++.++.+.. +.+++
T Consensus 77 ~~~p~vly~HGGg~~~g~~~~~~~~~~~-~~~~~g~~vv~vdYrlaPe~~~p~-~~~d~~~a~~~l~~~~~~~g~dp~~i 154 (312)
T COG0657 77 ATAPVVLYLHGGGWVLGSLRTHDALVAR-LAAAAGAVVVSVDYRLAPEHPFPA-ALEDAYAAYRWLRANAAELGIDPSRI 154 (312)
T ss_pred CCCcEEEEEeCCeeeecChhhhHHHHHH-HHHHcCCEEEecCCCCCCCCCCCc-hHHHHHHHHHHHHhhhHhhCCCccce
Confidence 457999999996643332 2122222 2 55666 4554 223322 3347777888887663 35789
Q ss_pred EEEEeChhHHHHHHHHhcChh
Q psy6856 174 SYIGHSMGTTMFYVMASMRPE 194 (370)
Q Consensus 174 ~lvGhS~GG~va~~~a~~~p~ 194 (370)
.+.|+|.||.+++.++..-.+
T Consensus 155 ~v~GdSAGG~La~~~a~~~~~ 175 (312)
T COG0657 155 AVAGDSAGGHLALALALAARD 175 (312)
T ss_pred EEEecCcccHHHHHHHHHHHh
Confidence 999999999999999876443
No 124
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.73 E-value=3.8e-05 Score=67.95 Aligned_cols=80 Identities=20% Similarity=0.144 Sum_probs=54.5
Q ss_pred CCeEEEeCCCCCChhHhhhccccccCCcce---------ecCC-------------CCCCcc-------cccCCHHHH--
Q psy6856 112 SPPVLLQHGLCLASDSWILRGQEDLGNLYK---------LYPK-------------NVNWHE-------HGLYDVPAM-- 160 (370)
Q Consensus 112 ~~~vlllHG~~~~~~~w~~~~~~~L~~~~~---------~~~~-------------~~~~~~-------~~~~D~~~~-- 160 (370)
.-|.+|+||.+|++.+...++.. |...|. .+.| ..+.-+ -...|...+
T Consensus 45 ~iPTIfIhGsgG~asS~~~Mv~q-l~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk 123 (288)
T COG4814 45 AIPTIFIHGSGGTASSLNGMVNQ-LLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLK 123 (288)
T ss_pred ccceEEEecCCCChhHHHHHHHH-hhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHH
Confidence 45789999999999999888887 733331 3333 111111 112244444
Q ss_pred --HHHHHHHcCCCCEEEEEeChhHHHHHHHHhcC
Q psy6856 161 --IDYILSVTRRPTLSYIGHSMGTTMFYVMASMR 192 (370)
Q Consensus 161 --i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~ 192 (370)
+.++-.+++++++.+|||||||.-...++..+
T Consensus 124 ~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~y 157 (288)
T COG4814 124 KAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDY 157 (288)
T ss_pred HHHHHHHHhcCCceeeeeeeccccHHHHHHHHHh
Confidence 44555667999999999999999999988765
No 125
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=97.70 E-value=0.00011 Score=65.30 Aligned_cols=50 Identities=22% Similarity=0.367 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHc--CCCCEEEEEeChhHHHHHHHHhcChhhhhccceeecccccee
Q psy6856 157 VPAMIDYILSVT--RRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQISLAPVAY 210 (370)
Q Consensus 157 ~~~~i~~l~~~~--~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~aP~~~ 210 (370)
+..+++++.++- ..++|.++|.|.||-+|+.+|+.+| .++.+ |+++|...
T Consensus 6 fe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~av---Va~~ps~~ 57 (213)
T PF08840_consen 6 FEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAV---VAISPSSV 57 (213)
T ss_dssp HHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEE---EEES--SB
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEE---EEeCCcee
Confidence 356778876653 3369999999999999999999998 33444 45555443
No 126
>KOG3724|consensus
Probab=97.67 E-value=5.5e-05 Score=76.35 Aligned_cols=97 Identities=23% Similarity=0.194 Sum_probs=57.2
Q ss_pred ECCCCcEEEEEEEcCC-------CCCCCeEEEeCCCCCChhHhhhccccccCC----cc-e--ecC------C----CCC
Q psy6856 93 KTQDGYTLTMHRIVPK-------YANSPPVLLQHGLCLASDSWILRGQEDLGN----LY-K--LYP------K----NVN 148 (370)
Q Consensus 93 ~t~dG~~l~~~~i~~~-------~~~~~~vlllHG~~~~~~~w~~~~~~~L~~----~~-~--~~~------~----~~~ 148 (370)
++.|-|.|.+++-.+. ..+|-||+|+.|+.||-..-+..+.. -.+ ++ + .+. | ++.
T Consensus 63 ~~a~kY~LYLY~Egs~~~e~~~lelsGIPVLFIPGNAGSyKQvRSiAS~-a~n~y~~~~~e~t~~~d~~~~~DFFaVDFn 141 (973)
T KOG3724|consen 63 PQADKYSLYLYREGSRWWERSTLELSGIPVLFIPGNAGSYKQVRSIASV-AQNAYQGGPFEKTEDRDNPFSFDFFAVDFN 141 (973)
T ss_pred CCCCceEEEEecccccccccccccCCCceEEEecCCCCchHHHHHHHHH-HhhhhcCCchhhhhcccCccccceEEEccc
Confidence 5677777776653221 34678999999999998877666544 211 11 1 111 1 111
Q ss_pred C----------cccccCCHHHHHHHHHHHcC---------CCCEEEEEeChhHHHHHHHHhc
Q psy6856 149 W----------HEHGLYDVPAMIDYILSVTR---------RPTLSYIGHSMGTTMFYVMASM 191 (370)
Q Consensus 149 ~----------~~~~~~D~~~~i~~l~~~~~---------~~~~~lvGhS~GG~va~~~a~~ 191 (370)
. .+.+. -+.++|.++++... ...+++|||||||.||.+.+..
T Consensus 142 Ee~tAm~G~~l~dQtE-YV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tl 202 (973)
T KOG3724|consen 142 EEFTAMHGHILLDQTE-YVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTL 202 (973)
T ss_pred chhhhhccHhHHHHHH-HHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhh
Confidence 1 11111 12334455544432 2349999999999999988765
No 127
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.67 E-value=0.00014 Score=65.88 Aligned_cols=89 Identities=19% Similarity=0.164 Sum_probs=59.6
Q ss_pred CeEEEeCCCCCChhHhhhccccccCCcce-ecCC--CCC---CcccccCCHH-HHHHHHHHHcCCCCEEEEEeChhHHHH
Q psy6856 113 PPVLLQHGLCLASDSWILRGQEDLGNLYK-LYPK--NVN---WHEHGLYDVP-AMIDYILSVTRRPTLSYIGHSMGTTMF 185 (370)
Q Consensus 113 ~~vlllHG~~~~~~~w~~~~~~~L~~~~~-~~~~--~~~---~~~~~~~D~~-~~i~~l~~~~~~~~~~lvGhS~GG~va 185 (370)
||++++||.+|+...|...... |+.... +..+ .+. .......|+. +.++.+.+.-+..+++|+|+|+||.+|
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~-l~~~~~v~~l~a~g~~~~~~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~vA 79 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAA-LGPLLPVYGLQAPGYGAGEQPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGAVA 79 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHH-hccCceeeccccCcccccccccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccHHH
Confidence 5899999999999999988888 866655 3333 322 1111122222 344455555666799999999999999
Q ss_pred HHHHhcC---hhhhhcccee
Q psy6856 186 YVMASMR---PEYNRKINLQ 202 (370)
Q Consensus 186 ~~~a~~~---p~~v~~l~~~ 202 (370)
+..|.+- .+.|..++++
T Consensus 80 ~evA~qL~~~G~~Va~L~ll 99 (257)
T COG3319 80 FEVAAQLEAQGEEVAFLGLL 99 (257)
T ss_pred HHHHHHHHhCCCeEEEEEEe
Confidence 9999863 2344555543
No 128
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.66 E-value=1.7e-05 Score=75.02 Aligned_cols=94 Identities=17% Similarity=0.279 Sum_probs=52.3
Q ss_pred CCCCCeEEEeCCCCCCh--hHhhhcccccc-C---Ccce-ecCC-----CCCCccc------ccCCHHHHHHHHHHH--c
Q psy6856 109 YANSPPVLLQHGLCLAS--DSWILRGQEDL-G---NLYK-LYPK-----NVNWHEH------GLYDVPAMIDYILSV--T 168 (370)
Q Consensus 109 ~~~~~~vlllHG~~~~~--~~w~~~~~~~L-~---~~~~-~~~~-----~~~~~~~------~~~D~~~~i~~l~~~--~ 168 (370)
..++|+++++||+.++. ..|.......+ . ..+. +..| ...+... .-..++..+..+.+. +
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~ 147 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGV 147 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCC
Confidence 45789999999999999 46655443313 3 3555 4444 1111000 001233345555433 3
Q ss_pred CCCCEEEEEeChhHHHHHHHHhcChh--hhhcccee
Q psy6856 169 RRPTLSYIGHSMGTTMFYVMASMRPE--YNRKINLQ 202 (370)
Q Consensus 169 ~~~~~~lvGhS~GG~va~~~a~~~p~--~v~~l~~~ 202 (370)
..+++++||||+|+.||-..+..... ++.+|..+
T Consensus 148 ~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgL 183 (331)
T PF00151_consen 148 PPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGL 183 (331)
T ss_dssp -GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEE
T ss_pred ChhHEEEEeeccchhhhhhhhhhccCcceeeEEEec
Confidence 55799999999999999988877655 55666554
No 129
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.62 E-value=5.9e-05 Score=67.82 Aligned_cols=99 Identities=12% Similarity=0.163 Sum_probs=56.1
Q ss_pred CCCCeEEEeCCCCCChhHhhhccccccC--Ccce-----ecCC------CCCCccc----ccCCHHHHHHHHHHHcCCCC
Q psy6856 110 ANSPPVLLQHGLCLASDSWILRGQEDLG--NLYK-----LYPK------NVNWHEH----GLYDVPAMIDYILSVTRRPT 172 (370)
Q Consensus 110 ~~~~~vlllHG~~~~~~~w~~~~~~~L~--~~~~-----~~~~------~~~~~~~----~~~D~~~~i~~l~~~~~~~~ 172 (370)
+.+..+||+||+..+-..-...... +. -++. ++.. +|..+.. ...++...+..+.+..+.++
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aq-l~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~ 94 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQ-LAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKR 94 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHH-HHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCce
Confidence 5678999999999987654444333 31 1121 3322 1211111 11133444555555557899
Q ss_pred EEEEEeChhHHHHHHHHhc----C--hhhhhccceeeccccce
Q psy6856 173 LSYIGHSMGTTMFYVMASM----R--PEYNRKINLQISLAPVA 209 (370)
Q Consensus 173 ~~lvGhS~GG~va~~~a~~----~--p~~v~~l~~~~~~aP~~ 209 (370)
|++++||||+.+.+..... . |+...++..+++.+|-.
T Consensus 95 I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDi 137 (233)
T PF05990_consen 95 IHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDI 137 (233)
T ss_pred EEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCC
Confidence 9999999999999886543 1 12223444445555543
No 130
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.42 E-value=0.00016 Score=68.64 Aligned_cols=88 Identities=19% Similarity=0.172 Sum_probs=58.7
Q ss_pred CCeEEEeCCCCCChhHhhhcccccc-CCcce------ecCC-C---CCCcccccCCHHHHHHHHHHHcCCCCEEEEEeCh
Q psy6856 112 SPPVLLQHGLCLASDSWILRGQEDL-GNLYK------LYPK-N---VNWHEHGLYDVPAMIDYILSVTRRPTLSYIGHSM 180 (370)
Q Consensus 112 ~~~vlllHG~~~~~~~w~~~~~~~L-~~~~~------~~~~-~---~~~~~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~ 180 (370)
.-|++++||+.++...|..+... + ..++. +... . .+....+ .-+-+.|+.++..++.+++.++||||
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~ql~~~V~~~l~~~ga~~v~LigHS~ 136 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYR-LAILGWLTNGVYAFELSGGDGTYSLAVRG-EQLFAYVDEVLAKTGAKKVNLIGHSM 136 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhh-hcchHHHhcccccccccccCCCccccccH-HHHHHHHHHHHhhcCCCceEEEeecc
Confidence 45899999999999998887766 5 22222 1111 1 1111111 12334566667778999999999999
Q ss_pred hHHHHHHHHhcCh--hhhhccce
Q psy6856 181 GTTMFYVMASMRP--EYNRKINL 201 (370)
Q Consensus 181 GG~va~~~a~~~p--~~v~~l~~ 201 (370)
||.+...++...+ .+++.++.
T Consensus 137 GG~~~ry~~~~~~~~~~V~~~~t 159 (336)
T COG1075 137 GGLDSRYYLGVLGGANRVASVVT 159 (336)
T ss_pred cchhhHHHHhhcCccceEEEEEE
Confidence 9999998888877 45555543
No 131
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=97.41 E-value=7.5e-05 Score=65.76 Aligned_cols=93 Identities=19% Similarity=0.157 Sum_probs=57.1
Q ss_pred EEEeCCCCCChhHh---hhcccccc--CCcce---ecCC---CCCCcccccCCHHHHHHHHHHH-----cCCCCEEEEEe
Q psy6856 115 VLLQHGLCLASDSW---ILRGQEDL--GNLYK---LYPK---NVNWHEHGLYDVPAMIDYILSV-----TRRPTLSYIGH 178 (370)
Q Consensus 115 vlllHG~~~~~~~w---~~~~~~~L--~~~~~---~~~~---~~~~~~~~~~D~~~~i~~l~~~-----~~~~~~~lvGh 178 (370)
||++||.+-...+- ...... + ..++. ++++ ..++.+ ...|+.++++++++. .+.++++++|+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~-la~~~g~~v~~~~Yrl~p~~~~p~-~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~ 78 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAAR-LAAERGFVVVSIDYRLAPEAPFPA-ALEDVKAAYRWLLKNADKLGIDPERIVLIGD 78 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHH-HHHHHTSEEEEEE---TTTSSTTH-HHHHHHHHHHHHHHTHHHHTEEEEEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHH-HHhhccEEEEEeeccccccccccc-cccccccceeeeccccccccccccceEEeec
Confidence 78999977554432 112222 3 24565 5555 333333 234888999999887 66789999999
Q ss_pred ChhHHHHHHHHhcChhh-hhccceeeccccce
Q psy6856 179 SMGTTMFYVMASMRPEY-NRKINLQISLAPVA 209 (370)
Q Consensus 179 S~GG~va~~~a~~~p~~-v~~l~~~~~~aP~~ 209 (370)
|.||.+++.++.+..+. ...+..+++++|..
T Consensus 79 SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 79 SAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp THHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred ccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 99999999999865543 12344455666644
No 132
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.37 E-value=0.00028 Score=65.88 Aligned_cols=101 Identities=19% Similarity=0.188 Sum_probs=60.8
Q ss_pred CCCCeEEEeCCCCCChhHhhhcccc---ccCCcce---ecCC------CCCCc----ccccCCHHHHHHHHHHHcCCCCE
Q psy6856 110 ANSPPVLLQHGLCLASDSWILRGQE---DLGNLYK---LYPK------NVNWH----EHGLYDVPAMIDYILSVTRRPTL 173 (370)
Q Consensus 110 ~~~~~vlllHG~~~~~~~w~~~~~~---~L~~~~~---~~~~------~~~~~----~~~~~D~~~~i~~l~~~~~~~~~ 173 (370)
..+..+||+||+.-+-.+=..-... ..+.... ++.. +|.++ ++...+++..+.++.+..+.++|
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I 193 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRI 193 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceE
Confidence 4678899999987765532111111 0111111 2211 33322 23334666777777777788999
Q ss_pred EEEEeChhHHHHHHH----HhcChh-hhhccceeecccccee
Q psy6856 174 SYIGHSMGTTMFYVM----ASMRPE-YNRKINLQISLAPVAY 210 (370)
Q Consensus 174 ~lvGhS~GG~va~~~----a~~~p~-~v~~l~~~~~~aP~~~ 210 (370)
++++||||+.+++.. +.+..+ ...++..+++.+|-..
T Consensus 194 ~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred EEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 999999999998864 445444 5566766666666543
No 133
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.29 E-value=0.0011 Score=61.68 Aligned_cols=102 Identities=15% Similarity=0.102 Sum_probs=64.6
Q ss_pred EEEEECCCCcEEEEEEEcCC-CCCCCeEEEeCCCCCChhH----------hhhccccccCCc-ceecCC-------CCCC
Q psy6856 89 THRTKTQDGYTLTMHRIVPK-YANSPPVLLQHGLCLASDS----------WILRGQEDLGNL-YKLYPK-------NVNW 149 (370)
Q Consensus 89 ~~~v~t~dG~~l~~~~i~~~-~~~~~~vlllHG~~~~~~~----------w~~~~~~~L~~~-~~~~~~-------~~~~ 149 (370)
.+.++. ||+.+....+..+ ..+...||+.-|+++.-+. |...+.. ++.+ +.+.++ ..+.
T Consensus 114 Rv~Iq~-D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~-~~aNvl~fNYpGVg~S~G~~s~ 191 (365)
T PF05677_consen 114 RVPIQY-DGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKE-LGANVLVFNYPGVGSSTGPPSR 191 (365)
T ss_pred eEEEee-CCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHH-cCCcEEEECCCccccCCCCCCH
Confidence 344444 8898886666532 3466789999998887776 2333333 3222 225555 2223
Q ss_pred cccccCCHHHHHHHHHHHc---CCCCEEEEEeChhHHHHHHHHhcCh
Q psy6856 150 HEHGLYDVPAMIDYILSVT---RRPTLSYIGHSMGTTMFYVMASMRP 193 (370)
Q Consensus 150 ~~~~~~D~~~~i~~l~~~~---~~~~~~lvGhS~GG~va~~~a~~~p 193 (370)
++++. |..+.++++.++- +.+++++.|||+||+|+...+.++.
T Consensus 192 ~dLv~-~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 192 KDLVK-DYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred HHHHH-HHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence 33333 6677788887642 4479999999999999888665543
No 134
>KOG2100|consensus
Probab=97.29 E-value=0.0025 Score=66.87 Aligned_cols=130 Identities=16% Similarity=0.132 Sum_probs=73.9
Q ss_pred HHHHcCCcceEEEEECCCCcEEEEEEE-cCC---CCCCCeEEEeCCCCCChh-------HhhhccccccCCcce---ecC
Q psy6856 79 LLRKWGLSSETHRTKTQDGYTLTMHRI-VPK---YANSPPVLLQHGLCLASD-------SWILRGQEDLGNLYK---LYP 144 (370)
Q Consensus 79 ~~~~~~~~~e~~~v~t~dG~~l~~~~i-~~~---~~~~~~vlllHG~~~~~~-------~w~~~~~~~L~~~~~---~~~ 144 (370)
......+|..+..-..-||+...+..+ |.+ ..+-|.+|..||.++|.. +|....-. ..++. ++.
T Consensus 489 ~~~~~~~p~~~~~~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s--~~g~~v~~vd~ 566 (755)
T KOG2100|consen 489 TIENVALPIVEFGKIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVS--SRGFAVLQVDG 566 (755)
T ss_pred HhhcccCCcceeEEEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhc--cCCeEEEEEcC
Confidence 344445554443333338887775544 432 233466777788887332 34333111 33444 454
Q ss_pred C-----CCC-----CcccccC---CHHHHHHHHHHH--cCCCCEEEEEeChhHHHHHHHHhcChhhhhccceeeccccce
Q psy6856 145 K-----NVN-----WHEHGLY---DVPAMIDYILSV--TRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQISLAPVA 209 (370)
Q Consensus 145 ~-----~~~-----~~~~~~~---D~~~~i~~l~~~--~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~aP~~ 209 (370)
+ +.. ....+.. |...++..+++. .+.+++.+.|+|-||.++..++...|+.+-+ +.++.+|+.
T Consensus 567 RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fk--cgvavaPVt 644 (755)
T KOG2100|consen 567 RGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFK--CGVAVAPVT 644 (755)
T ss_pred CCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEE--EEEEeccee
Confidence 4 111 1223333 555555565555 3557999999999999999999998854433 335677776
Q ss_pred eec
Q psy6856 210 YVS 212 (370)
Q Consensus 210 ~~~ 212 (370)
...
T Consensus 645 d~~ 647 (755)
T KOG2100|consen 645 DWL 647 (755)
T ss_pred eee
Confidence 543
No 135
>COG4099 Predicted peptidase [General function prediction only]
Probab=97.28 E-value=0.0011 Score=60.22 Aligned_cols=109 Identities=19% Similarity=0.117 Sum_probs=61.2
Q ss_pred CCCCcEEEE-EEEcCC---CCCC-CeEEEeCCCCCChhHhhhcccccc------CCcce---ecCC-C--CCCcccccCC
Q psy6856 94 TQDGYTLTM-HRIVPK---YANS-PPVLLQHGLCLASDSWILRGQEDL------GNLYK---LYPK-N--VNWHEHGLYD 156 (370)
Q Consensus 94 t~dG~~l~~-~~i~~~---~~~~-~~vlllHG~~~~~~~w~~~~~~~L------~~~~~---~~~~-~--~~~~~~~~~D 156 (370)
++.|..|.+ .++|.+ +..- |.|||+||.+.-+.+=.......+ +..+. ++|. + +...|....+
T Consensus 168 ~~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t~~ 247 (387)
T COG4099 168 ESTGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKTLL 247 (387)
T ss_pred cccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccccccccccccccch
Confidence 455666664 344533 2233 889999999887765333221112 11111 3433 1 1111111111
Q ss_pred H-H---HHHH-HHHHHcC--CCCEEEEEeChhHHHHHHHHhcChhhhhcccee
Q psy6856 157 V-P---AMID-YILSVTR--RPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQ 202 (370)
Q Consensus 157 ~-~---~~i~-~l~~~~~--~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~ 202 (370)
. . +.++ .+.++.+ ..+|+++|.|+||.-++.++.++|+..+..+.+
T Consensus 248 ~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~i 300 (387)
T COG4099 248 YLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPI 300 (387)
T ss_pred hHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeee
Confidence 1 1 2222 3344444 468999999999999999999999987776653
No 136
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=97.24 E-value=0.00073 Score=63.54 Aligned_cols=85 Identities=20% Similarity=0.251 Sum_probs=59.4
Q ss_pred CCCeEEEeCCCCCChhHhhhcccccc-CCcce-ecCC-----------------CCCCccc--ccCCHHHHHHHHHHH--
Q psy6856 111 NSPPVLLQHGLCLASDSWILRGQEDL-GNLYK-LYPK-----------------NVNWHEH--GLYDVPAMIDYILSV-- 167 (370)
Q Consensus 111 ~~~~vlllHG~~~~~~~w~~~~~~~L-~~~~~-~~~~-----------------~~~~~~~--~~~D~~~~i~~l~~~-- 167 (370)
.-|.|+|-||.+++..++....+. + +.||- ..++ .+...++ -.+|+...++++.+.
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~-lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~ 148 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEH-LASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTA 148 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHH-HhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhc
Confidence 458899999999999998888888 7 55665 1111 1111111 123777788877655
Q ss_pred -------cCCCCEEEEEeChhHHHHHHHHhcChhhh
Q psy6856 168 -------TRRPTLSYIGHSMGTTMFYVMASMRPEYN 196 (370)
Q Consensus 168 -------~~~~~~~lvGhS~GG~va~~~a~~~p~~v 196 (370)
++..+|-++|||.||..++.++.-+.+..
T Consensus 149 sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~ 184 (365)
T COG4188 149 SPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAE 184 (365)
T ss_pred CcccccccCccceEEEecccccHHHHHhccccccHH
Confidence 34579999999999999999887665543
No 137
>KOG1553|consensus
Probab=97.08 E-value=0.0017 Score=59.97 Aligned_cols=111 Identities=15% Similarity=0.133 Sum_probs=69.9
Q ss_pred eEEEEECCCCcEEEEEEEcCC---CC-CCCeEEEeCCCCCChhHhhhccccccCCcce-ecCC-----CCC---Cccccc
Q psy6856 88 ETHRTKTQDGYTLTMHRIVPK---YA-NSPPVLLQHGLCLASDSWILRGQEDLGNLYK-LYPK-----NVN---WHEHGL 154 (370)
Q Consensus 88 e~~~v~t~dG~~l~~~~i~~~---~~-~~~~vlllHG~~~~~~~w~~~~~~~L~~~~~-~~~~-----~~~---~~~~~~ 154 (370)
...++++.||-.+..-++... .+ ....|+++-|+.|.-+.=....+ ++.+|+ +..+ +.+ +..-..
T Consensus 215 ~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEvG~m~tP--~~lgYsvLGwNhPGFagSTG~P~p~n~~ 292 (517)
T KOG1553|consen 215 QRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEVGVMNTP--AQLGYSVLGWNHPGFAGSTGLPYPVNTL 292 (517)
T ss_pred eEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceEeeeecCh--HHhCceeeccCCCCccccCCCCCcccch
Confidence 567889999988876666432 22 34567888887765543222222 355777 4443 111 111111
Q ss_pred CCHHHHHHHHHHHcCC--CCEEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 155 YDVPAMIDYILSVTRR--PTLSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 155 ~D~~~~i~~l~~~~~~--~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
.-+.+.+++.++.+|. +.|+++|+|.||.-+..+|+.+|+ |+.+++
T Consensus 293 nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvL 340 (517)
T KOG1553|consen 293 NAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVL 340 (517)
T ss_pred HHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEe
Confidence 1233455566777764 689999999999999999999998 455543
No 138
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=96.93 E-value=0.0019 Score=67.86 Aligned_cols=47 Identities=19% Similarity=0.123 Sum_probs=35.4
Q ss_pred CCHHHHHHHHHHHc----------------CCCCEEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 155 YDVPAMIDYILSVT----------------RRPTLSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 155 ~D~~~~i~~l~~~~----------------~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
.|..+.|+++..+. .-.+|.++|.|+||.+++.+|...|+.++.++.
T Consensus 306 ~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~aAa~~pp~LkAIVp 368 (767)
T PRK05371 306 ESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNAVATTGVEGLETIIP 368 (767)
T ss_pred HHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHHHHHHhhCCCcceEEEe
Confidence 47778888886431 136999999999999999999887765455443
No 139
>PRK04940 hypothetical protein; Provisional
Probab=96.92 E-value=0.0019 Score=55.10 Aligned_cols=35 Identities=11% Similarity=0.087 Sum_probs=26.4
Q ss_pred CCEEEEEeChhHHHHHHHHhcChhhhhccceeeccccceee
Q psy6856 171 PTLSYIGHSMGTTMFYVMASMRPEYNRKINLQISLAPVAYV 211 (370)
Q Consensus 171 ~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~aP~~~~ 211 (370)
+++.+||.|+||..|..+|.++. +.. +++.|+..+
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g-----~~a-VLiNPAv~P 94 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG-----IRQ-VIFNPNLFP 94 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC-----CCE-EEECCCCCh
Confidence 58999999999999999998864 222 455665543
No 140
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.86 E-value=0.0017 Score=54.18 Aligned_cols=35 Identities=14% Similarity=0.141 Sum_probs=26.8
Q ss_pred HHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChh
Q psy6856 160 MIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPE 194 (370)
Q Consensus 160 ~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~ 194 (370)
.++..+...+..+++++|||+||++|..++.+...
T Consensus 17 ~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~ 51 (153)
T cd00741 17 LLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRG 51 (153)
T ss_pred HHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHh
Confidence 33333444467899999999999999999887654
No 141
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=96.85 E-value=0.0039 Score=45.89 Aligned_cols=48 Identities=21% Similarity=0.230 Sum_probs=37.3
Q ss_pred CcEEEEEEEcCCCCCCCeEEEeCCCCCChhHhhhcccccc-CCcce-ecCC
Q psy6856 97 GYTLTMHRIVPKYANSPPVLLQHGLCLASDSWILRGQEDL-GNLYK-LYPK 145 (370)
Q Consensus 97 G~~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~~~~~L-~~~~~-~~~~ 145 (370)
|.+|....+.+..+.+.+|+++||+++++..|..++.. | .+||. +..|
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~-L~~~G~~V~~~D 50 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEF-LAEQGYAVFAYD 50 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHH-HHhCCCEEEEEC
Confidence 56677666554433578999999999999999999998 8 78898 4444
No 142
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=96.82 E-value=0.0019 Score=55.39 Aligned_cols=94 Identities=14% Similarity=0.077 Sum_probs=66.1
Q ss_pred eEEEeCCCCCChhHhhhcccccc-CCcce-ecCC-------CCCCcccccCCHHHHHHHHHHHcCCCCEEEEEeChhHHH
Q psy6856 114 PVLLQHGLCLASDSWILRGQEDL-GNLYK-LYPK-------NVNWHEHGLYDVPAMIDYILSVTRRPTLSYIGHSMGTTM 184 (370)
Q Consensus 114 ~vlllHG~~~~~~~w~~~~~~~L-~~~~~-~~~~-------~~~~~~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~v 184 (370)
.+|++-|=+|-...=..++.. | .+|+. +..| ..++++.+. |+.+.++...++.+.+++.|+|+|.|+-+
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~-l~~~G~~VvGvdsl~Yfw~~rtP~~~a~-Dl~~~i~~y~~~w~~~~vvLiGYSFGADv 81 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEA-LAKQGVPVVGVDSLRYFWSERTPEQTAA-DLARIIRHYRARWGRKRVVLIGYSFGADV 81 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHH-HHHCCCeEEEechHHHHhhhCCHHHHHH-HHHHHHHHHHHHhCCceEEEEeecCCchh
Confidence 577788766655433344455 6 66777 4444 445555554 88888888888899999999999999988
Q ss_pred HHHHHhcChh-hhhccceeeccccce
Q psy6856 185 FYVMASMRPE-YNRKINLQISLAPVA 209 (370)
Q Consensus 185 a~~~a~~~p~-~v~~l~~~~~~aP~~ 209 (370)
.....-+-|+ .-+++..+++++|..
T Consensus 82 lP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 82 LPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred HHHHHhhCCHHHHhheeEEEEeccCC
Confidence 8777776664 346677666666643
No 143
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.80 E-value=0.002 Score=52.66 Aligned_cols=38 Identities=13% Similarity=0.197 Sum_probs=30.0
Q ss_pred CHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcCh
Q psy6856 156 DVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRP 193 (370)
Q Consensus 156 D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p 193 (370)
.+.+.++.+.+..+..++++.|||+||++|..++....
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~ 86 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADLA 86 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhh
Confidence 34456666677777678999999999999999887643
No 144
>KOG2112|consensus
Probab=96.80 E-value=0.0026 Score=55.06 Aligned_cols=88 Identities=19% Similarity=0.232 Sum_probs=54.0
Q ss_pred CCeEEEeCCCCCChhHhhhccccccCC-cce-ecCC---------------------CCC----CcccccCCHHHHHHHH
Q psy6856 112 SPPVLLQHGLCLASDSWILRGQEDLGN-LYK-LYPK---------------------NVN----WHEHGLYDVPAMIDYI 164 (370)
Q Consensus 112 ~~~vlllHG~~~~~~~w~~~~~~~L~~-~~~-~~~~---------------------~~~----~~~~~~~D~~~~i~~l 164 (370)
..+||++||.+++...|...... |.. +.. +.|. ..+ .++....-..+.+..+
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~-l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQ-LPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHc-CCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 35799999999999999877766 521 111 2111 000 0111111233344444
Q ss_pred HHH-----cCCCCEEEEEeChhHHHHHHHHhcChhhhhccc
Q psy6856 165 LSV-----TRRPTLSYIGHSMGTTMFYVMASMRPEYNRKIN 200 (370)
Q Consensus 165 ~~~-----~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~ 200 (370)
.+. ....++.+-|.||||++++..+..+|..+.++.
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~ 122 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIF 122 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceee
Confidence 443 234689999999999999999998875544443
No 145
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.76 E-value=0.0044 Score=57.19 Aligned_cols=90 Identities=11% Similarity=0.033 Sum_probs=55.5
Q ss_pred CCCCeEEEeCCCCCChhH-----hhhccccccC--CcceecCCCCCCcccccCCHHHHHHHHHHHcCC-----CCEEEEE
Q psy6856 110 ANSPPVLLQHGLCLASDS-----WILRGQEDLG--NLYKLYPKNVNWHEHGLYDVPAMIDYILSVTRR-----PTLSYIG 177 (370)
Q Consensus 110 ~~~~~vlllHG~~~~~~~-----w~~~~~~~L~--~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~-----~~~~lvG 177 (370)
....|||+.||+|.+-.+ +...+.+ +. .++++...+...+.+. .++-+.++.+++.+.. +-+++||
T Consensus 23 ~~~~P~ViwHG~GD~c~~~g~~~~~~l~~~-~~g~~~~~i~ig~~~~~s~~-~~~~~Qve~vce~l~~~~~l~~G~naIG 100 (314)
T PLN02633 23 SVSVPFIMLHGIGTQCSDATNANFTQLLTN-LSGSPGFCLEIGNGVGDSWL-MPLTQQAEIACEKVKQMKELSQGYNIVG 100 (314)
T ss_pred cCCCCeEEecCCCcccCCchHHHHHHHHHh-CCCCceEEEEECCCccccce-eCHHHHHHHHHHHHhhchhhhCcEEEEE
Confidence 345789999999987664 3333433 31 1233222221222222 2555666666555422 3699999
Q ss_pred eChhHHHHHHHHhcChh--hhhccce
Q psy6856 178 HSMGTTMFYVMASMRPE--YNRKINL 201 (370)
Q Consensus 178 hS~GG~va~~~a~~~p~--~v~~l~~ 201 (370)
+|+||.++-.++.+.|+ .|+.+|.
T Consensus 101 fSQGGlflRa~ierc~~~p~V~nlIS 126 (314)
T PLN02633 101 RSQGNLVARGLIEFCDGGPPVYNYIS 126 (314)
T ss_pred EccchHHHHHHHHHCCCCCCcceEEE
Confidence 99999999999999886 3666654
No 146
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=96.71 E-value=0.0035 Score=61.04 Aligned_cols=107 Identities=14% Similarity=0.147 Sum_probs=65.0
Q ss_pred ECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhH---hhhcccccc-CCc-ce---ecCC----------C-----CCC
Q psy6856 93 KTQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDS---WILRGQEDL-GNL-YK---LYPK----------N-----VNW 149 (370)
Q Consensus 93 ~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~---w~~~~~~~L-~~~-~~---~~~~----------~-----~~~ 149 (370)
..+|...|.+|.-..+..+.|++|++||.+=..++ -...... | .+| .- +.+| . ...
T Consensus 75 ~sEDCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~-La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~ 153 (491)
T COG2272 75 GSEDCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSA-LAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFA 153 (491)
T ss_pred ccccceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHH-HHhcCCEEEEEeCcccccceeeehhhcccccccc
Confidence 46788888887644234456999999996433332 1122223 4 223 11 3333 1 111
Q ss_pred cccccCCHHHHHHHHHHH---cCC--CCEEEEEeChhHHHHHHHHhcChh---hhhccce
Q psy6856 150 HEHGLYDVPAMIDYILSV---TRR--PTLSYIGHSMGTTMFYVMASMRPE---YNRKINL 201 (370)
Q Consensus 150 ~~~~~~D~~~~i~~l~~~---~~~--~~~~lvGhS~GG~va~~~a~~~p~---~v~~l~~ 201 (370)
+..+..|...+++++.+. .|- +.|.|+|+|.|++.++.+.+. |+ ..+|.++
T Consensus 154 ~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~ 212 (491)
T COG2272 154 SNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIA 212 (491)
T ss_pred ccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHH
Confidence 224666888888888554 444 689999999999999887765 54 4556543
No 147
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=96.69 E-value=0.0007 Score=65.36 Aligned_cols=31 Identities=29% Similarity=0.352 Sum_probs=20.4
Q ss_pred CCCCeEEEeCCCCCChhHhhhcccccc-CCcce
Q psy6856 110 ANSPPVLLQHGLCLASDSWILRGQEDL-GNLYK 141 (370)
Q Consensus 110 ~~~~~vlllHG~~~~~~~w~~~~~~~L-~~~~~ 141 (370)
+.-|+|||-||++++...+..+... | .+||-
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~e-LAS~GyV 129 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGE-LASHGYV 129 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHH-HHHTT-E
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHH-HHhCCeE
Confidence 3458899999999999998888877 7 56775
No 148
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=96.68 E-value=0.011 Score=58.62 Aligned_cols=95 Identities=19% Similarity=0.200 Sum_probs=55.2
Q ss_pred CcEEEEEEEcCC--CCCCCeEEEeCCCCCChhHhhh---ccccc-------c-CCcce---------ec-CC--CCCCcc
Q psy6856 97 GYTLTMHRIVPK--YANSPPVLLQHGLCLASDSWIL---RGQED-------L-GNLYK---------LY-PK--NVNWHE 151 (370)
Q Consensus 97 G~~l~~~~i~~~--~~~~~~vlllHG~~~~~~~w~~---~~~~~-------L-~~~~~---------~~-~~--~~~~~~ 151 (370)
+..+.+|.++.. ..+.|.||+++|.+|++..+.. +.|-. + .+.|+ +| |. +++..+
T Consensus 60 ~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~ 139 (462)
T PTZ00472 60 DKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYAD 139 (462)
T ss_pred CceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCC
Confidence 456777777643 3457999999999999986532 22221 1 12222 22 11 333321
Q ss_pred c---c--cCCHHHHHHHHHH----H---cCCCCEEEEEeChhHHHHHHHHhc
Q psy6856 152 H---G--LYDVPAMIDYILS----V---TRRPTLSYIGHSMGTTMFYVMASM 191 (370)
Q Consensus 152 ~---~--~~D~~~~i~~l~~----~---~~~~~~~lvGhS~GG~va~~~a~~ 191 (370)
. . ..++++++..+++ + ++..+++++|||+||..+..+|.+
T Consensus 140 ~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~ 191 (462)
T PTZ00472 140 KADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYR 191 (462)
T ss_pred CCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHH
Confidence 1 1 1123333333333 2 345899999999999999888875
No 149
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=96.62 E-value=0.0087 Score=59.99 Aligned_cols=109 Identities=15% Similarity=0.082 Sum_probs=63.4
Q ss_pred ECCCCcEEEEEEEcCC--CCCCCeEEEeCCCCCChhHhhh-cccccc-CC--cce---ecCC----CCC-------Cccc
Q psy6856 93 KTQDGYTLTMHRIVPK--YANSPPVLLQHGLCLASDSWIL-RGQEDL-GN--LYK---LYPK----NVN-------WHEH 152 (370)
Q Consensus 93 ~t~dG~~l~~~~i~~~--~~~~~~vlllHG~~~~~~~w~~-~~~~~L-~~--~~~---~~~~----~~~-------~~~~ 152 (370)
.++|-..|.++.-... ....|++|++||.+-..+.-.. .... | .. ++- +.+| ++- ....
T Consensus 74 ~sEdcl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~~~~~-~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~ 152 (493)
T cd00312 74 GSEDCLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLYPGDG-LAREGDNVIVVSINYRLGVLGFLSTGDIELPGNY 152 (493)
T ss_pred CCCcCCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCCChHH-HHhcCCCEEEEEecccccccccccCCCCCCCcch
Confidence 3677777776653211 2456899999995432221111 1122 2 11 133 3444 111 1123
Q ss_pred ccCCHHHHHHHHHHH---c--CCCCEEEEEeChhHHHHHHHHhc--Chhhhhcccee
Q psy6856 153 GLYDVPAMIDYILSV---T--RRPTLSYIGHSMGTTMFYVMASM--RPEYNRKINLQ 202 (370)
Q Consensus 153 ~~~D~~~~i~~l~~~---~--~~~~~~lvGhS~GG~va~~~a~~--~p~~v~~l~~~ 202 (370)
+..|..++++++.+. . +.++|+++|||.||..+..++.. .+..+++++++
T Consensus 153 g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~ 209 (493)
T cd00312 153 GLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQ 209 (493)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhh
Confidence 455888888888655 3 34699999999999999888776 23456666653
No 150
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.59 E-value=0.029 Score=56.51 Aligned_cols=118 Identities=17% Similarity=0.167 Sum_probs=74.0
Q ss_pred CCcceEEEEECCCCcEEEEEEEcC----CCCCCCeEEEeCCCCCChhHhhhcccc-cc-CCcce--ec-CC-----CCCC
Q psy6856 84 GLSSETHRTKTQDGYTLTMHRIVP----KYANSPPVLLQHGLCLASDSWILRGQE-DL-GNLYK--LY-PK-----NVNW 149 (370)
Q Consensus 84 ~~~~e~~~v~t~dG~~l~~~~i~~----~~~~~~~vlllHG~~~~~~~w~~~~~~-~L-~~~~~--~~-~~-----~~~~ 149 (370)
.|..+..+++..||..+.+-.+-. -++++|.+|.--|.-|.+..=...... +| .+|+- ++ .| +..|
T Consensus 416 ~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~W 495 (682)
T COG1770 416 DYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAW 495 (682)
T ss_pred HeEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHH
Confidence 466777888889998877433221 245677777766655554421111111 02 55554 21 22 2222
Q ss_pred c--------ccccCCHHHHHHHHHHH--cCCCCEEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 150 H--------EHGLYDVPAMIDYILSV--TRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 150 ~--------~~~~~D~~~~i~~l~~~--~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
. .-+..|+-++.+++++. ...+.+..+|-|.||+++-+.|-+.|+..+++++
T Consensus 496 Ye~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA 557 (682)
T COG1770 496 YEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIA 557 (682)
T ss_pred HHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheee
Confidence 1 12334777888888666 3446899999999999999999999999888765
No 151
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=96.53 E-value=0.01 Score=51.40 Aligned_cols=84 Identities=12% Similarity=0.019 Sum_probs=49.9
Q ss_pred EeCCCC--CChhHhhhccccccCCcce-ecCC--CCCCcccccCCHHHHHH----HHHHHcCCCCEEEEEeChhHHHHHH
Q psy6856 117 LQHGLC--LASDSWILRGQEDLGNLYK-LYPK--NVNWHEHGLYDVPAMID----YILSVTRRPTLSYIGHSMGTTMFYV 187 (370)
Q Consensus 117 llHG~~--~~~~~w~~~~~~~L~~~~~-~~~~--~~~~~~~~~~D~~~~i~----~l~~~~~~~~~~lvGhS~GG~va~~ 187 (370)
++|+.+ ++...|...... |...+. +..+ .....+....++.+..+ .+.+..+..+++++|||+||.++..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~-l~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~ 80 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAA-LRGRRDVSALPLPGFGPGEPLPASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHA 80 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHh-cCCCccEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHH
Confidence 344433 677788888887 755555 3332 22222222223333333 3344455678999999999999998
Q ss_pred HHhcC---hhhhhccce
Q psy6856 188 MASMR---PEYNRKINL 201 (370)
Q Consensus 188 ~a~~~---p~~v~~l~~ 201 (370)
.+.+. ++.+.++++
T Consensus 81 ~a~~l~~~~~~~~~l~~ 97 (212)
T smart00824 81 VAARLEARGIPPAAVVL 97 (212)
T ss_pred HHHHHHhCCCCCcEEEE
Confidence 88863 334455543
No 152
>PLN02606 palmitoyl-protein thioesterase
Probab=96.51 E-value=0.0067 Score=55.93 Aligned_cols=89 Identities=11% Similarity=-0.062 Sum_probs=52.5
Q ss_pred CCCeEEEeCCCC--CChhHhhhccccccC--Cc-c--eecCCCCCCcccccCCHHHHHHHHHHHcCC-----CCEEEEEe
Q psy6856 111 NSPPVLLQHGLC--LASDSWILRGQEDLG--NL-Y--KLYPKNVNWHEHGLYDVPAMIDYILSVTRR-----PTLSYIGH 178 (370)
Q Consensus 111 ~~~~vlllHG~~--~~~~~w~~~~~~~L~--~~-~--~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~-----~~~~lvGh 178 (370)
...|||+.||++ .+...+..+... +. .+ + .+...+...+.+ ..++-+.++.+++.+.. +-+++||+
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~-i~~~~~~pg~~v~ig~~~~~s~-~~~~~~Qv~~vce~l~~~~~L~~G~naIGf 102 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQF-LINHSGYPGTCVEIGNGVQDSL-FMPLRQQASIACEKIKQMKELSEGYNIVAE 102 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHH-HHhCCCCCeEEEEECCCccccc-ccCHHHHHHHHHHHHhcchhhcCceEEEEE
Confidence 346899999999 444444444443 32 12 1 222111111111 12555566666555422 36999999
Q ss_pred ChhHHHHHHHHhcChh--hhhccce
Q psy6856 179 SMGTTMFYVMASMRPE--YNRKINL 201 (370)
Q Consensus 179 S~GG~va~~~a~~~p~--~v~~l~~ 201 (370)
|+||.++-.++.+.|+ .|+.+|.
T Consensus 103 SQGglflRa~ierc~~~p~V~nlIS 127 (306)
T PLN02606 103 SQGNLVARGLIEFCDNAPPVINYVS 127 (306)
T ss_pred cchhHHHHHHHHHCCCCCCcceEEE
Confidence 9999999999999876 2566654
No 153
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.49 E-value=0.0036 Score=54.71 Aligned_cols=51 Identities=22% Similarity=0.354 Sum_probs=40.1
Q ss_pred ccccCCHHHHHHHHHHHcCC-CCEEEEEeChhHHHHHHHHhcC----hhhhhcccee
Q psy6856 151 EHGLYDVPAMIDYILSVTRR-PTLSYIGHSMGTTMFYVMASMR----PEYNRKINLQ 202 (370)
Q Consensus 151 ~~~~~D~~~~i~~l~~~~~~-~~~~lvGhS~GG~va~~~a~~~----p~~v~~l~~~ 202 (370)
+.+..|+.++.++.+++.+. ++++|+|||+|+.+...+..+. | .-++||..
T Consensus 74 ~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~~~~~p-l~~rLVAA 129 (207)
T PF11288_consen 74 DLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEEIAGDP-LRKRLVAA 129 (207)
T ss_pred HhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHHhcCch-HHhhhhee
Confidence 34566899999988888744 6999999999999999998764 4 45666653
No 154
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=96.46 E-value=0.0021 Score=62.40 Aligned_cols=80 Identities=15% Similarity=0.115 Sum_probs=49.4
Q ss_pred Hhhhcccccc-CCcce-------ecCC-CCCCc--ccccCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChh-
Q psy6856 127 SWILRGQEDL-GNLYK-------LYPK-NVNWH--EHGLYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPE- 194 (370)
Q Consensus 127 ~w~~~~~~~L-~~~~~-------~~~~-~~~~~--~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~- 194 (370)
.|..++.. | ..||. ..+| ..+.. +.....+.+.|+...+.. .+|++||||||||.++..+....+.
T Consensus 66 ~~~~li~~-L~~~GY~~~~~l~~~pYDWR~~~~~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl~~~~~~ 143 (389)
T PF02450_consen 66 YFAKLIEN-LEKLGYDRGKDLFAAPYDWRLSPAERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFLQWMPQE 143 (389)
T ss_pred hHHHHHHH-HHhcCcccCCEEEEEeechhhchhhHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHHHhccch
Confidence 78888888 7 55666 1133 22222 111124556666665555 5899999999999999998887643
Q ss_pred --hhhccceeeccccc
Q psy6856 195 --YNRKINLQISLAPV 208 (370)
Q Consensus 195 --~v~~l~~~~~~aP~ 208 (370)
.-+.|..+|.+|+.
T Consensus 144 ~W~~~~i~~~i~i~~p 159 (389)
T PF02450_consen 144 EWKDKYIKRFISIGTP 159 (389)
T ss_pred hhHHhhhhEEEEeCCC
Confidence 22344444555543
No 155
>KOG3043|consensus
Probab=96.44 E-value=0.0069 Score=53.00 Aligned_cols=81 Identities=11% Similarity=0.143 Sum_probs=50.1
Q ss_pred CCeEEEeCCCCCChhH-hhhcccccc-CCcce-ecCC-----CCCCc---------------ccccCCHHHHHHHHHHHc
Q psy6856 112 SPPVLLQHGLCLASDS-WILRGQEDL-GNLYK-LYPK-----NVNWH---------------EHGLYDVPAMIDYILSVT 168 (370)
Q Consensus 112 ~~~vlllHG~~~~~~~-w~~~~~~~L-~~~~~-~~~~-----~~~~~---------------~~~~~D~~~~i~~l~~~~ 168 (370)
+..||++.-..|.... =+..+.. + .+||. +-|| .++.+ +....|+.+.++++..+-
T Consensus 39 ~~~li~i~DvfG~~~~n~r~~Adk-~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g 117 (242)
T KOG3043|consen 39 KKVLIVIQDVFGFQFPNTREGADK-VALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHG 117 (242)
T ss_pred CeEEEEEEeeeccccHHHHHHHHH-HhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcC
Confidence 3466666655554443 3344444 4 56888 6666 11221 122346777777776444
Q ss_pred CCCCEEEEEeChhHHHHHHHHhcCh
Q psy6856 169 RRPTLSYIGHSMGTTMFYVMASMRP 193 (370)
Q Consensus 169 ~~~~~~lvGhS~GG~va~~~a~~~p 193 (370)
...+|-++|.+|||.++..+....|
T Consensus 118 ~~kkIGv~GfCwGak~vv~~~~~~~ 142 (242)
T KOG3043|consen 118 DSKKIGVVGFCWGAKVVVTLSAKDP 142 (242)
T ss_pred CcceeeEEEEeecceEEEEeeccch
Confidence 4789999999999998776666655
No 156
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=96.42 E-value=0.003 Score=58.81 Aligned_cols=26 Identities=23% Similarity=0.304 Sum_probs=23.4
Q ss_pred CCcEEEEeeCCCcccCHHhHHhcccc
Q psy6856 342 TAPVALFYSNNDYLSHPACNQHGALN 367 (370)
Q Consensus 342 ~~PvLli~G~~D~lv~~~~~~~L~~~ 367 (370)
++|+++.+|.+|.++|+..++++.++
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~ 244 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAK 244 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHH
Confidence 68999999999999999999888654
No 157
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=96.34 E-value=0.014 Score=54.85 Aligned_cols=86 Identities=17% Similarity=0.105 Sum_probs=52.6
Q ss_pred CCCCeEEEeCCCCCChhHhhhcc--cccc-CCcce-ec-------CC------CCCCc---cc------ccCCHHHHHHH
Q psy6856 110 ANSPPVLLQHGLCLASDSWILRG--QEDL-GNLYK-LY-------PK------NVNWH---EH------GLYDVPAMIDY 163 (370)
Q Consensus 110 ~~~~~vlllHG~~~~~~~w~~~~--~~~L-~~~~~-~~-------~~------~~~~~---~~------~~~D~~~~i~~ 163 (370)
+.+|.+|.++|.++.....+... .. | .+|.. +- .+ ..... ++ ...+....+.+
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~p-Ll~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~W 168 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARP-LLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHW 168 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhH-HHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHH
Confidence 45788999999999776544433 33 3 45655 11 11 11111 11 01122223334
Q ss_pred HHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhh
Q psy6856 164 ILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNR 197 (370)
Q Consensus 164 l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~ 197 (370)
+. +-|..++.+.|-||||.+|...|+..|..+.
T Consensus 169 l~-~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~ 201 (348)
T PF09752_consen 169 LE-REGYGPLGLTGISMGGHMAALAASNWPRPVA 201 (348)
T ss_pred HH-hcCCCceEEEEechhHhhHHhhhhcCCCcee
Confidence 33 3489999999999999999999999996543
No 158
>KOG3847|consensus
Probab=96.33 E-value=0.0028 Score=58.01 Aligned_cols=31 Identities=19% Similarity=0.288 Sum_probs=24.4
Q ss_pred cCCCCEEEEEeChhHHHHHHHHhcChhhhhc
Q psy6856 168 TRRPTLSYIGHSMGTTMFYVMASMRPEYNRK 198 (370)
Q Consensus 168 ~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~ 198 (370)
+...++.++|||.||+.++...+.+.+.-..
T Consensus 238 l~~s~~aViGHSFGgAT~i~~ss~~t~Frca 268 (399)
T KOG3847|consen 238 LDTSQAAVIGHSFGGATSIASSSSHTDFRCA 268 (399)
T ss_pred hhhhhhhheeccccchhhhhhhccccceeee
Confidence 4456799999999999999888887664333
No 159
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=96.32 E-value=0.022 Score=55.71 Aligned_cols=33 Identities=15% Similarity=0.013 Sum_probs=28.9
Q ss_pred CCCCEEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 169 RRPTLSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 169 ~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
+.++..+.|+||||..|+.++.++|+...+++.
T Consensus 286 d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s 318 (411)
T PRK10439 286 DADRTVVAGQSFGGLAALYAGLHWPERFGCVLS 318 (411)
T ss_pred CccceEEEEEChHHHHHHHHHHhCcccccEEEE
Confidence 446789999999999999999999998877754
No 160
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=96.28 E-value=0.0021 Score=58.66 Aligned_cols=92 Identities=13% Similarity=0.082 Sum_probs=42.7
Q ss_pred CCCCeEEEeCCCCCChh---Hhhhcccc---ccCCcce--ecCCCCCCcc-c-c-cCCHHHHHHHHHHHcCC-----CCE
Q psy6856 110 ANSPPVLLQHGLCLASD---SWILRGQE---DLGNLYK--LYPKNVNWHE-H-G-LYDVPAMIDYILSVTRR-----PTL 173 (370)
Q Consensus 110 ~~~~~vlllHG~~~~~~---~w~~~~~~---~L~~~~~--~~~~~~~~~~-~-~-~~D~~~~i~~l~~~~~~-----~~~ 173 (370)
+...|||+.||++.+.. .+..+... .+...|- +...+...++ . + ..++.+.++.+++.+.. +-+
T Consensus 3 ~~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~ 82 (279)
T PF02089_consen 3 PSPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIGNDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGF 82 (279)
T ss_dssp TSS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SSSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-E
T ss_pred CCCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEECCCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcce
Confidence 45578999999997542 33333322 0122233 3222111111 1 1 12444555555444321 469
Q ss_pred EEEEeChhHHHHHHHHhcChh-hhhccce
Q psy6856 174 SYIGHSMGTTMFYVMASMRPE-YNRKINL 201 (370)
Q Consensus 174 ~lvGhS~GG~va~~~a~~~p~-~v~~l~~ 201 (370)
++||+|+||.++-.++.+.|+ .|+.+|.
T Consensus 83 ~~IGfSQGgl~lRa~vq~c~~~~V~nlIS 111 (279)
T PF02089_consen 83 NAIGFSQGGLFLRAYVQRCNDPPVHNLIS 111 (279)
T ss_dssp EEEEETCHHHHHHHHHHH-TSS-EEEEEE
T ss_pred eeeeeccccHHHHHHHHHCCCCCceeEEE
Confidence 999999999999999999875 3455443
No 161
>KOG2541|consensus
Probab=96.22 E-value=0.0086 Score=53.76 Aligned_cols=91 Identities=19% Similarity=0.181 Sum_probs=51.7
Q ss_pred CCCeEEEeCCCCCChhH--hhhccccccC-----CcceecCCCCCCcccccCCHHHHHHHHHHHcCC-----CCEEEEEe
Q psy6856 111 NSPPVLLQHGLCLASDS--WILRGQEDLG-----NLYKLYPKNVNWHEHGLYDVPAMIDYILSVTRR-----PTLSYIGH 178 (370)
Q Consensus 111 ~~~~vlllHG~~~~~~~--w~~~~~~~L~-----~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~-----~~~~lvGh 178 (370)
+..|+|++||++++..+ .....+. +. .+|.++.-+. .++....-+-+.++.+++.+.. +-++++|.
T Consensus 22 s~~P~ii~HGigd~c~~~~~~~~~q~-l~~~~g~~v~~leig~g-~~~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg~ 99 (296)
T KOG2541|consen 22 SPVPVIVWHGIGDSCSSLSMANLTQL-LEELPGSPVYCLEIGDG-IKDSSLMPLWEQVDVACEKVKQMPELSQGYNIVGY 99 (296)
T ss_pred ccCCEEEEeccCcccccchHHHHHHH-HHhCCCCeeEEEEecCC-cchhhhccHHHHHHHHHHHHhcchhccCceEEEEE
Confidence 33689999999998886 3333333 31 1233332211 1111112333444444444322 46999999
Q ss_pred ChhHHHHHHHHhcChhhhhccceeecc
Q psy6856 179 SMGTTMFYVMASMRPEYNRKINLQISL 205 (370)
Q Consensus 179 S~GG~va~~~a~~~p~~v~~l~~~~~~ 205 (370)
|+||.++-.++...++ ..+..+|.+
T Consensus 100 SQGglv~Raliq~cd~--ppV~n~ISL 124 (296)
T KOG2541|consen 100 SQGGLVARALIQFCDN--PPVKNFISL 124 (296)
T ss_pred ccccHHHHHHHHhCCC--CCcceeEec
Confidence 9999999999987665 334444444
No 162
>KOG1515|consensus
Probab=96.21 E-value=0.023 Score=53.75 Aligned_cols=124 Identities=19% Similarity=0.166 Sum_probs=72.6
Q ss_pred CcceEEEEECCCCcEEEEEEEcCC-C-CCCCeEEEeCCCCCChhH-----hhhcccccc---------CCcceecCCCCC
Q psy6856 85 LSSETHRTKTQDGYTLTMHRIVPK-Y-ANSPPVLLQHGLCLASDS-----WILRGQEDL---------GNLYKLYPKNVN 148 (370)
Q Consensus 85 ~~~e~~~v~t~dG~~l~~~~i~~~-~-~~~~~vlllHG~~~~~~~-----w~~~~~~~L---------~~~~~~~~~~~~ 148 (370)
.-..++.+....|..+++++-... . ...|.||++||.|-..++ +..+... + .=+|+++|. .
T Consensus 61 v~~~dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~-~a~~~~~vvvSVdYRLAPE--h 137 (336)
T KOG1515|consen 61 VTSKDVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTR-LAAELNCVVVSVDYRLAPE--H 137 (336)
T ss_pred ceeeeeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHH-HHHHcCeEEEecCcccCCC--C
Confidence 334555556666655555442221 2 356889999997755542 2222222 2 122222222 1
Q ss_pred CcccccCCHHHHHHHHHHH------cCCCCEEEEEeChhHHHHHHHHhcChhh---hhccceeeccccceee
Q psy6856 149 WHEHGLYDVPAMIDYILSV------TRRPTLSYIGHSMGTTMFYVMASMRPEY---NRKINLQISLAPVAYV 211 (370)
Q Consensus 149 ~~~~~~~D~~~~i~~l~~~------~~~~~~~lvGhS~GG~va~~~a~~~p~~---v~~l~~~~~~aP~~~~ 211 (370)
.-..+.+|.-+++.++.+. .+.+++++.|-|.||.+|..+|.+.-+- --++...+++-|....
T Consensus 138 ~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~ 209 (336)
T KOG1515|consen 138 PFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQG 209 (336)
T ss_pred CCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCC
Confidence 1123445888888888765 3667999999999999999998874321 2355555666666543
No 163
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.16 E-value=0.05 Score=49.19 Aligned_cols=42 Identities=19% Similarity=0.309 Sum_probs=33.9
Q ss_pred cCCCCEEEEEeChhHHHHHHHHhcChhhhhccceeeccccceeec
Q psy6856 168 TRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQISLAPVAYVS 212 (370)
Q Consensus 168 ~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~aP~~~~~ 212 (370)
++.++-.++|||+||.+++.....+|+...+.. +.||..+..
T Consensus 134 ~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~---~~SPSlWw~ 175 (264)
T COG2819 134 TNSERTAIIGHSLGGLFVLFALLTYPDCFGRYG---LISPSLWWH 175 (264)
T ss_pred cCcccceeeeecchhHHHHHHHhcCcchhceee---eecchhhhC
Confidence 355679999999999999999999998877764 456766543
No 164
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.14 E-value=0.0062 Score=54.51 Aligned_cols=36 Identities=17% Similarity=0.127 Sum_probs=27.1
Q ss_pred HHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcCh
Q psy6856 158 PAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRP 193 (370)
Q Consensus 158 ~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p 193 (370)
...+...+++....++++.|||+||++|..++....
T Consensus 115 ~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~ 150 (229)
T cd00519 115 LPELKSALKQYPDYKIIVTGHSLGGALASLLALDLR 150 (229)
T ss_pred HHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHH
Confidence 334445555556679999999999999999887643
No 165
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=96.03 E-value=0.043 Score=51.51 Aligned_cols=117 Identities=15% Similarity=0.103 Sum_probs=67.2
Q ss_pred Cc-ceEEEEECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhHhhhcccc---cc-CCcce-ec--CCC--------C-
Q psy6856 85 LS-SETHRTKTQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDSWILRGQE---DL-GNLYK-LY--PKN--------V- 147 (370)
Q Consensus 85 ~~-~e~~~v~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~~~~---~L-~~~~~-~~--~~~--------~- 147 (370)
+| .|-.++...+...+.+++-..+......||++||.+.+.+ |-..+.. .| ..|++ ++ +.+ .
T Consensus 59 lp~~e~~~L~~~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d-~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~ 137 (310)
T PF12048_consen 59 LPADEVQWLQAGEERFLALWRPANSAKPQGAVIILPDWGEHPD-WPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRA 137 (310)
T ss_pred CCHhhcEEeecCCEEEEEEEecccCCCCceEEEEecCCCCCCC-cHhHHHHHHHHhhhcCceEEEecCCCcccccCCccC
Confidence 45 5556667766665666654444455678999999998875 3333322 13 56776 22 210 0
Q ss_pred ---------CCcccc----------------cC----CHHHHHHHH---HHHcCCCCEEEEEeChhHHHHHHHHhcChh-
Q psy6856 148 ---------NWHEHG----------------LY----DVPAMIDYI---LSVTRRPTLSYIGHSMGTTMFYVMASMRPE- 194 (370)
Q Consensus 148 ---------~~~~~~----------------~~----D~~~~i~~l---~~~~~~~~~~lvGhS~GG~va~~~a~~~p~- 194 (370)
...... .. .+.+-++.+ ....+..+++||||+.|+..++.+.++.+.
T Consensus 138 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~ 217 (310)
T PF12048_consen 138 TEAEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPP 217 (310)
T ss_pred CCCCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCc
Confidence 000000 00 111122222 333566679999999999999999998764
Q ss_pred hhhcccee
Q psy6856 195 YNRKINLQ 202 (370)
Q Consensus 195 ~v~~l~~~ 202 (370)
.++.+|.+
T Consensus 218 ~~daLV~I 225 (310)
T PF12048_consen 218 MPDALVLI 225 (310)
T ss_pred ccCeEEEE
Confidence 46677654
No 166
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=95.90 E-value=0.011 Score=54.28 Aligned_cols=106 Identities=15% Similarity=0.060 Sum_probs=63.4
Q ss_pred CCcEEEE-EEEc--CCCCCCCeEEEeCCCCCCh---hHhhhccc-------cccCCcce---ecCC-------CCCC-cc
Q psy6856 96 DGYTLTM-HRIV--PKYANSPPVLLQHGLCLAS---DSWILRGQ-------EDLGNLYK---LYPK-------NVNW-HE 151 (370)
Q Consensus 96 dG~~l~~-~~i~--~~~~~~~~vlllHG~~~~~---~~w~~~~~-------~~L~~~~~---~~~~-------~~~~-~~ 151 (370)
||.+|.. .+.| ...++.|+||..|+.+.+. ..-....+ ....+||. .+.+ .+.. .+
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~~ 80 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMSP 80 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTSH
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCCh
Confidence 7888874 4456 4455668889999999764 11111111 10367888 4554 1111 11
Q ss_pred cccCCHHHHHHHHHHHc-CCCCEEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 152 HGLYDVPAMIDYILSVT-RRPTLSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 152 ~~~~D~~~~i~~l~~~~-~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
....|..+.|+.+.++- .-.+|-.+|.|.+|..++..|+..|..++.++.
T Consensus 81 ~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p 131 (272)
T PF02129_consen 81 NEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVP 131 (272)
T ss_dssp HHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEE
T ss_pred hHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEe
Confidence 12237778888886661 224899999999999999999977765555543
No 167
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.89 E-value=0.022 Score=50.85 Aligned_cols=79 Identities=14% Similarity=0.047 Sum_probs=48.5
Q ss_pred CCCeEEEeCCCCCChhHhhhccccccCCcceecCCCCCCcccccCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHh
Q psy6856 111 NSPPVLLQHGLCLASDSWILRGQEDLGNLYKLYPKNVNWHEHGLYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMAS 190 (370)
Q Consensus 111 ~~~~vlllHG~~~~~~~w~~~~~~~L~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~ 190 (370)
.+..+|-.=|.-.+...|...+.. .+. ........+.+.++.+++..+. ++.+.|||.||.+|...|+
T Consensus 36 ~~~~~vaFRGTd~t~~~W~ed~~~----~~~-------~~~~~q~~A~~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~ 103 (224)
T PF11187_consen 36 DGEYVVAFRGTDDTLVDWKEDFNM----SFQ-------DETPQQKSALAYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAA 103 (224)
T ss_pred CCeEEEEEECCCCchhhHHHHHHh----hcC-------CCCHHHHHHHHHHHHHHHhCCC-CEEEEEechhhHHHHHHHH
Confidence 445677777776677788876654 111 0001111334455566666654 6999999999999999888
Q ss_pred cChhh-hhccce
Q psy6856 191 MRPEY-NRKINL 201 (370)
Q Consensus 191 ~~p~~-v~~l~~ 201 (370)
..++. -++|..
T Consensus 104 ~~~~~~~~rI~~ 115 (224)
T PF11187_consen 104 NCDDEIQDRISK 115 (224)
T ss_pred HccHHHhhheeE
Confidence 75432 234444
No 168
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=95.85 E-value=0.015 Score=57.76 Aligned_cols=116 Identities=16% Similarity=0.105 Sum_probs=73.9
Q ss_pred CCcceEEEEECCCCcEEEEEEEcCC--CCCCCeEEEeCCCCCChhH----hhhccccccCCcce---ecCC-----CCCC
Q psy6856 84 GLSSETHRTKTQDGYTLTMHRIVPK--YANSPPVLLQHGLCLASDS----WILRGQEDLGNLYK---LYPK-----NVNW 149 (370)
Q Consensus 84 ~~~~e~~~v~t~dG~~l~~~~i~~~--~~~~~~vlllHG~~~~~~~----w~~~~~~~L~~~~~---~~~~-----~~~~ 149 (370)
+|.+|....++.||.++.++-+..+ ..+.|++|. |.+|..-. +.......|.+|.. -..| +..|
T Consensus 391 ~~~veQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~--aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~W 468 (648)
T COG1505 391 NYEVEQFFATSKDGTRIPYFIVRKGAKKDENPTLLY--AYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEW 468 (648)
T ss_pred CceEEEEEEEcCCCccccEEEEecCCcCCCCceEEE--eccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHH
Confidence 7788899999999999998777433 224666654 44443321 22222111233332 2223 1112
Q ss_pred --------cccccCCHHHHHHHHHHH--cCCCCEEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 150 --------HEHGLYDVPAMIDYILSV--TRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 150 --------~~~~~~D~~~~i~~l~~~--~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
.+-+.+|..|..+.+.++ +..+++-+-|-|-||.+.-....++||....+++
T Consensus 469 H~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~ 530 (648)
T COG1505 469 HQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVC 530 (648)
T ss_pred HHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceee
Confidence 223455888888888766 3447899999999999988888899998776654
No 169
>COG0627 Predicted esterase [General function prediction only]
Probab=95.80 E-value=0.011 Score=55.49 Aligned_cols=38 Identities=21% Similarity=0.206 Sum_probs=30.5
Q ss_pred CCEEEEEeChhHHHHHHHHhcChhhhhccceeeccccceee
Q psy6856 171 PTLSYIGHSMGTTMFYVMASMRPEYNRKINLQISLAPVAYV 211 (370)
Q Consensus 171 ~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~aP~~~~ 211 (370)
++..++||||||.=|+.+|++||++...+. ..+|...+
T Consensus 152 ~~~aI~G~SMGG~GAl~lA~~~pd~f~~~s---S~Sg~~~~ 189 (316)
T COG0627 152 DGRAIAGHSMGGYGALKLALKHPDRFKSAS---SFSGILSP 189 (316)
T ss_pred CCceeEEEeccchhhhhhhhhCcchhceec---cccccccc
Confidence 379999999999999999999998766654 45555543
No 170
>COG3150 Predicted esterase [General function prediction only]
Probab=95.76 E-value=0.019 Score=47.93 Aligned_cols=78 Identities=10% Similarity=0.035 Sum_probs=51.0
Q ss_pred EEEeCCCCCChhHhhhccccc-cCCcce-ecCCCCCCcccccCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcC
Q psy6856 115 VLLQHGLCLASDSWILRGQED-LGNLYK-LYPKNVNWHEHGLYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMR 192 (370)
Q Consensus 115 vlllHG~~~~~~~w~~~~~~~-L~~~~~-~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~ 192 (370)
+|++|||-+|.++...+.... ++.... +.+...... .....+.+.++.++...+.+...++|-|+||..|..++.++
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~~~~i~y~~p~l~-h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~ 80 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDEDVRDIEYSTPHLP-HDPQQALKELEKAVQELGDESPLIVGSSLGGYYATWLGFLC 80 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhccccceeeecCCCC-CCHHHHHHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHh
Confidence 789999999998876554321 233332 222211000 00114455677778888878899999999999999999886
Q ss_pred h
Q psy6856 193 P 193 (370)
Q Consensus 193 p 193 (370)
.
T Consensus 81 G 81 (191)
T COG3150 81 G 81 (191)
T ss_pred C
Confidence 4
No 171
>KOG3975|consensus
Probab=95.66 E-value=0.06 Score=47.97 Aligned_cols=81 Identities=16% Similarity=0.280 Sum_probs=51.0
Q ss_pred CCCCeEEEeCCCCCChhHhhhcccccc----CCc---ce-------ecCC----CCCCcccccCCHHHHHH----HHHHH
Q psy6856 110 ANSPPVLLQHGLCLASDSWILRGQEDL----GNL---YK-------LYPK----NVNWHEHGLYDVPAMID----YILSV 167 (370)
Q Consensus 110 ~~~~~vlllHG~~~~~~~w~~~~~~~L----~~~---~~-------~~~~----~~~~~~~~~~D~~~~i~----~l~~~ 167 (370)
.+++-++++.|++|+.+-+...+.. | ..+ |. ..|. +.+-.....+.+...++ .+.+.
T Consensus 27 ~~~~li~~IpGNPG~~gFY~~F~~~-L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~ 105 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYTEFARH-LHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEY 105 (301)
T ss_pred CCceEEEEecCCCCchhHHHHHHHH-HHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHh
Confidence 5678899999999999998888877 5 221 21 1121 11111111224444444 33334
Q ss_pred cCC-CCEEEEEeChhHHHHHHHHhc
Q psy6856 168 TRR-PTLSYIGHSMGTTMFYVMASM 191 (370)
Q Consensus 168 ~~~-~~~~lvGhS~GG~va~~~a~~ 191 (370)
+.. .|++++|||.|+.+.+.+.-.
T Consensus 106 ~Pk~~ki~iiGHSiGaYm~Lqil~~ 130 (301)
T KOG3975|consen 106 VPKDRKIYIIGHSIGAYMVLQILPS 130 (301)
T ss_pred CCCCCEEEEEecchhHHHHHHHhhh
Confidence 433 589999999999999998864
No 172
>KOG2237|consensus
Probab=95.60 E-value=0.032 Score=55.86 Aligned_cols=118 Identities=19% Similarity=0.230 Sum_probs=75.5
Q ss_pred HcCCcceEEEEECCCCcEEEEEEEcCC----CCCCCeEEEeCCCCCChhHhhhccccc---c-CCcceec---CC-----
Q psy6856 82 KWGLSSETHRTKTQDGYTLTMHRIVPK----YANSPPVLLQHGLCLASDSWILRGQED---L-GNLYKLY---PK----- 145 (370)
Q Consensus 82 ~~~~~~e~~~v~t~dG~~l~~~~i~~~----~~~~~~vlllHG~~~~~~~w~~~~~~~---L-~~~~~~~---~~----- 145 (370)
...|.++.+.+.+.||..+.+.-+... .++.|.+|..|| +...+-.+..... | ..|+-++ .|
T Consensus 436 ~s~y~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYG--ay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~ 513 (712)
T KOG2237|consen 436 ASDYVVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYG--AYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEY 513 (712)
T ss_pred ccceEEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEec--ccceeeccccccceeEEEecceEEEEEeeccCccc
Confidence 346788999999999998775433321 345665555554 4444322222211 2 3344322 23
Q ss_pred CCCCcc--------cccCCHHHHHHHHHHH--cCCCCEEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 146 NVNWHE--------HGLYDVPAMIDYILSV--TRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 146 ~~~~~~--------~~~~D~~~~i~~l~~~--~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
+..|+. -...|+.+..+++.+. ...++..+.|.|.||.++.++.-++|+.+..+++
T Consensus 514 G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia 579 (712)
T KOG2237|consen 514 GEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIA 579 (712)
T ss_pred ccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhh
Confidence 233332 2345888888988766 4567999999999999999999899998776553
No 173
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=95.46 E-value=0.018 Score=45.34 Aligned_cols=43 Identities=23% Similarity=0.291 Sum_probs=25.9
Q ss_pred EEEEECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhHhhhc
Q psy6856 89 THRTKTQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDSWILR 131 (370)
Q Consensus 89 ~~~v~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~ 131 (370)
.+..++-||..++..+.....++..|+||+||++||-..|..+
T Consensus 69 phf~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 69 PHFKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp -EEEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHH
T ss_pred CCeeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhh
Confidence 3445556798888777766667788999999999998877654
No 174
>KOG3101|consensus
Probab=95.35 E-value=0.003 Score=54.66 Aligned_cols=41 Identities=20% Similarity=0.284 Sum_probs=32.4
Q ss_pred CCCCEEEEEeChhHHHHHHHHhcChhhhhccceeeccccceeec
Q psy6856 169 RRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQISLAPVAYVS 212 (370)
Q Consensus 169 ~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~aP~~~~~ 212 (370)
+..++-+.||||||.=|+..+.++|.+-+++ .+.||.+.+.
T Consensus 139 d~~k~~IfGHSMGGhGAl~~~Lkn~~kykSv---SAFAPI~NP~ 179 (283)
T KOG3101|consen 139 DPLKVGIFGHSMGGHGALTIYLKNPSKYKSV---SAFAPICNPI 179 (283)
T ss_pred cchhcceeccccCCCceEEEEEcCcccccce---eccccccCcc
Confidence 4468999999999999999999999765554 4667776544
No 175
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=95.28 E-value=0.12 Score=51.76 Aligned_cols=117 Identities=13% Similarity=0.024 Sum_probs=72.9
Q ss_pred cCCcceEEEEECCCCcEEEE-EEEcCCCCCCCeEEEeCCCCCChhH-----hhhccc---cccCCcce-ecCC-------
Q psy6856 83 WGLSSETHRTKTQDGYTLTM-HRIVPKYANSPPVLLQHGLCLASDS-----WILRGQ---EDLGNLYK-LYPK------- 145 (370)
Q Consensus 83 ~~~~~e~~~v~t~dG~~l~~-~~i~~~~~~~~~vlllHG~~~~~~~-----w~~~~~---~~L~~~~~-~~~~------- 145 (370)
.++-..+..|++.||.+|.. .+.|++.++.|+++..+=.+=...+ -....+ ...++||. +..|
T Consensus 15 ~~~~~~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~S 94 (563)
T COG2936 15 AGYIERDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGS 94 (563)
T ss_pred cceeeeeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccC
Confidence 34666788999999999984 5667766777888877811111111 111122 20267887 3333
Q ss_pred --CCCCccc-ccCCHHHHHHHHHHH-cCCCCEEEEEeChhHHHHHHHHhcChhhhhcc
Q psy6856 146 --NVNWHEH-GLYDVPAMIDYILSV-TRRPTLSYIGHSMGTTMFYVMASMRPEYNRKI 199 (370)
Q Consensus 146 --~~~~~~~-~~~D~~~~i~~l~~~-~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l 199 (370)
.+..... -..|..+.|+.+.+. -.-.+|-.+|-|.+|...+.+|+.+|...+.+
T Consensus 95 eG~~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai 152 (563)
T COG2936 95 EGVFDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAI 152 (563)
T ss_pred CcccceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheee
Confidence 1111111 123777788887654 33468999999999999999999877544433
No 176
>PLN00413 triacylglycerol lipase
Probab=95.23 E-value=0.018 Score=56.14 Aligned_cols=37 Identities=16% Similarity=0.354 Sum_probs=30.7
Q ss_pred cCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHh
Q psy6856 154 LYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMAS 190 (370)
Q Consensus 154 ~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~ 190 (370)
.|.+...+..+++..+..++++.|||+||++|..+|.
T Consensus 267 yy~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 267 YYTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 3456677777788877789999999999999998875
No 177
>PLN02162 triacylglycerol lipase
Probab=95.17 E-value=0.018 Score=56.07 Aligned_cols=35 Identities=17% Similarity=0.313 Sum_probs=27.7
Q ss_pred CHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHh
Q psy6856 156 DVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMAS 190 (370)
Q Consensus 156 D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~ 190 (370)
.+.+.+..++++.+..++++.|||+||++|..+|+
T Consensus 263 ~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 45556666666666679999999999999998765
No 178
>PLN02454 triacylglycerol lipase
Probab=95.10 E-value=0.027 Score=54.36 Aligned_cols=36 Identities=22% Similarity=0.299 Sum_probs=27.2
Q ss_pred CHHHHHHHHHHHcCCCC--EEEEEeChhHHHHHHHHhc
Q psy6856 156 DVPAMIDYILSVTRRPT--LSYIGHSMGTTMFYVMASM 191 (370)
Q Consensus 156 D~~~~i~~l~~~~~~~~--~~lvGhS~GG~va~~~a~~ 191 (370)
++.+.|..+++.....+ +++.||||||++|...|..
T Consensus 211 qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 211 QLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 34455666666665554 9999999999999998865
No 179
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=95.04 E-value=0.021 Score=51.58 Aligned_cols=29 Identities=24% Similarity=0.233 Sum_probs=26.6
Q ss_pred EEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 173 LSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 173 ~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
..+.|+||||..|+.++.+||+...+++.
T Consensus 117 ~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~ 145 (251)
T PF00756_consen 117 RAIAGHSMGGYGALYLALRHPDLFGAVIA 145 (251)
T ss_dssp EEEEEETHHHHHHHHHHHHSTTTESEEEE
T ss_pred eEEeccCCCcHHHHHHHHhCccccccccc
Confidence 79999999999999999999998887754
No 180
>KOG4627|consensus
Probab=94.83 E-value=0.064 Score=46.48 Aligned_cols=90 Identities=14% Similarity=0.166 Sum_probs=53.8
Q ss_pred CCCCCeEEEeCCCCCChhHhh----hccccccCCcce---ecCCCCCCccc----ccCCHHHHHHHHHHHcC-CCCEEEE
Q psy6856 109 YANSPPVLLQHGLCLASDSWI----LRGQEDLGNLYK---LYPKNVNWHEH----GLYDVPAMIDYILSVTR-RPTLSYI 176 (370)
Q Consensus 109 ~~~~~~vlllHG~~~~~~~w~----~~~~~~L~~~~~---~~~~~~~~~~~----~~~D~~~~i~~l~~~~~-~~~~~lv 176 (370)
..+.+..+|+||.--..++.. ...+. +.++|+ .+++ ...+.. ...++..-++++++.+. .+.+.+-
T Consensus 64 ~~~~klfIfIHGGYW~~g~rk~clsiv~~a-~~~gY~vasvgY~-l~~q~htL~qt~~~~~~gv~filk~~~n~k~l~~g 141 (270)
T KOG4627|consen 64 TNQAKLFIFIHGGYWQEGDRKMCLSIVGPA-VRRGYRVASVGYN-LCPQVHTLEQTMTQFTHGVNFILKYTENTKVLTFG 141 (270)
T ss_pred CCCccEEEEEecchhhcCchhcccchhhhh-hhcCeEEEEeccC-cCcccccHHHHHHHHHHHHHHHHHhcccceeEEEc
Confidence 456789999999543333221 12222 477888 3333 222221 12255566777787764 4567788
Q ss_pred EeChhHHHHHHHHhcC-hhhhhccc
Q psy6856 177 GHSMGTTMFYVMASMR-PEYNRKIN 200 (370)
Q Consensus 177 GhS~GG~va~~~a~~~-p~~v~~l~ 200 (370)
|||.|+.+|+....+. ..++.+++
T Consensus 142 GHSaGAHLa~qav~R~r~prI~gl~ 166 (270)
T KOG4627|consen 142 GHSAGAHLAAQAVMRQRSPRIWGLI 166 (270)
T ss_pred ccchHHHHHHHHHHHhcCchHHHHH
Confidence 9999999999877663 23455544
No 181
>KOG2369|consensus
Probab=94.80 E-value=0.019 Score=55.65 Aligned_cols=68 Identities=16% Similarity=0.141 Sum_probs=47.4
Q ss_pred hHhhhcccccc-CCcce-------ecCC---CCCC---cccccCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhc
Q psy6856 126 DSWILRGQEDL-GNLYK-------LYPK---NVNW---HEHGLYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASM 191 (370)
Q Consensus 126 ~~w~~~~~~~L-~~~~~-------~~~~---~~~~---~~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~ 191 (370)
..|..++.+ | +-||. ..+| ++.. .+.....+...|+...+..|-+|++||+|||||.+.+.+...
T Consensus 124 ~~w~~~i~~-lv~~GYe~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w 202 (473)
T KOG2369|consen 124 WYWHELIEN-LVGIGYERGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKW 202 (473)
T ss_pred HHHHHHHHH-HHhhCcccCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhc
Confidence 578888888 7 45555 2233 2211 112222566677777777788999999999999999999988
Q ss_pred Chh
Q psy6856 192 RPE 194 (370)
Q Consensus 192 ~p~ 194 (370)
+++
T Consensus 203 ~~~ 205 (473)
T KOG2369|consen 203 VEA 205 (473)
T ss_pred ccc
Confidence 766
No 182
>KOG2281|consensus
Probab=94.66 E-value=0.18 Score=50.67 Aligned_cols=121 Identities=18% Similarity=0.036 Sum_probs=75.4
Q ss_pred eEEEEECCCCcEEEE-EEEcCC---CCCCCeEEEeCCCCCCh-----hHhhhccccc-c-CCcce---ecCC-----C--
Q psy6856 88 ETHRTKTQDGYTLTM-HRIVPK---YANSPPVLLQHGLCLAS-----DSWILRGQED-L-GNLYK---LYPK-----N-- 146 (370)
Q Consensus 88 e~~~v~t~dG~~l~~-~~i~~~---~~~~~~vlllHG~~~~~-----~~w~~~~~~~-L-~~~~~---~~~~-----~-- 146 (370)
|-..+.+..|.++.. .+-|.. ..+-|+|+++-|.++-. ..|....+.. | ..||. +|-| +
T Consensus 614 eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlk 693 (867)
T KOG2281|consen 614 EIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLK 693 (867)
T ss_pred hheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchh
Confidence 445567777777763 333332 23458899999977633 2333222210 2 56777 4544 1
Q ss_pred ------CCCcccccCCHHHHHHHHHHHcC---CCCEEEEEeChhHHHHHHHHhcChhhhhccceeeccccceee
Q psy6856 147 ------VNWHEHGLYDVPAMIDYILSVTR---RPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQISLAPVAYV 211 (370)
Q Consensus 147 ------~~~~~~~~~D~~~~i~~l~~~~~---~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~aP~~~~ 211 (370)
........+|....+..+.+++| .+++.+-|+|.||.++++..+++|+..+ + .|+-||+...
T Consensus 694 FE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~Ifr-v--AIAGapVT~W 764 (867)
T KOG2281|consen 694 FESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFR-V--AIAGAPVTDW 764 (867)
T ss_pred hHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceee-E--EeccCcceee
Confidence 12223334567777778888864 5899999999999999999999997533 2 2456666543
No 183
>PLN02934 triacylglycerol lipase
Probab=94.55 E-value=0.031 Score=55.02 Aligned_cols=35 Identities=17% Similarity=0.376 Sum_probs=28.8
Q ss_pred CHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHh
Q psy6856 156 DVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMAS 190 (370)
Q Consensus 156 D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~ 190 (370)
.+...++.+++.....++++.|||+||++|..+|.
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 35566777777777789999999999999998875
No 184
>PLN02571 triacylglycerol lipase
Probab=94.39 E-value=0.046 Score=52.83 Aligned_cols=36 Identities=17% Similarity=0.281 Sum_probs=26.6
Q ss_pred CHHHHHHHHHHHcCCC--CEEEEEeChhHHHHHHHHhc
Q psy6856 156 DVPAMIDYILSVTRRP--TLSYIGHSMGTTMFYVMASM 191 (370)
Q Consensus 156 D~~~~i~~l~~~~~~~--~~~lvGhS~GG~va~~~a~~ 191 (370)
++.+.+..+++....+ ++++.||||||++|...|..
T Consensus 209 qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 209 QVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 3445556666665433 68999999999999998865
No 185
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=94.31 E-value=0.053 Score=54.66 Aligned_cols=106 Identities=15% Similarity=0.178 Sum_probs=57.2
Q ss_pred CCCCcEEEEEEEcCCCC--CCCeEEEeCCCCCChhHh---hhcccccc--CCcce---ecCC----------CCC--Ccc
Q psy6856 94 TQDGYTLTMHRIVPKYA--NSPPVLLQHGLCLASDSW---ILRGQEDL--GNLYK---LYPK----------NVN--WHE 151 (370)
Q Consensus 94 t~dG~~l~~~~i~~~~~--~~~~vlllHG~~~~~~~w---~~~~~~~L--~~~~~---~~~~----------~~~--~~~ 151 (370)
++|=..|.++.-..... ..|++|++||.+-..+.= ...... + .++.- +.+| ... ...
T Consensus 105 sEDCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~-~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN 183 (535)
T PF00135_consen 105 SEDCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGAS-LAASKDVIVVTINYRLGAFGFLSLGDLDAPSGN 183 (535)
T ss_dssp ES---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHH-HHHHHTSEEEEE----HHHHH-BSSSTTSHBST
T ss_pred CchHHHHhhhhccccccccccceEEEeecccccCCCcccccccccc-cccCCCEEEEEecccccccccccccccccCchh
Confidence 56666777765432222 359999999955443321 111111 2 11111 3444 111 134
Q ss_pred cccCCHHHHHHHHHHHc---C--CCCEEEEEeChhHHHHHHHHhcChh---hhhccce
Q psy6856 152 HGLYDVPAMIDYILSVT---R--RPTLSYIGHSMGTTMFYVMASMRPE---YNRKINL 201 (370)
Q Consensus 152 ~~~~D~~~~i~~l~~~~---~--~~~~~lvGhS~GG~va~~~a~~~p~---~v~~l~~ 201 (370)
.+..|...+++++.+.. | .++|+|+|||.||..+..++.. |. ..++.++
T Consensus 184 ~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s-p~~~~LF~raI~ 240 (535)
T PF00135_consen 184 YGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLS-PSSKGLFHRAIL 240 (535)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHG-GGGTTSBSEEEE
T ss_pred hhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeec-cccccccccccc
Confidence 55668899999996664 3 3689999999999998887766 43 4555554
No 186
>KOG4372|consensus
Probab=94.28 E-value=0.035 Score=52.86 Aligned_cols=76 Identities=17% Similarity=0.195 Sum_probs=42.9
Q ss_pred CCCCeEEEeCCCCC-ChhHhhhccccccCCcc---e-e--cCC-----CC-CCcccccCCHHHHHHHHHHHcCCCCEEEE
Q psy6856 110 ANSPPVLLQHGLCL-ASDSWILRGQEDLGNLY---K-L--YPK-----NV-NWHEHGLYDVPAMIDYILSVTRRPTLSYI 176 (370)
Q Consensus 110 ~~~~~vlllHG~~~-~~~~w~~~~~~~L~~~~---~-~--~~~-----~~-~~~~~~~~D~~~~i~~l~~~~~~~~~~lv 176 (370)
..+..||+.||+-+ +...|...+.. ....+ . + ... .. ..+-++. -+...+.+.+....++++.++
T Consensus 78 k~~HLvVlthGi~~~~~~~~~~~~~~-~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~-Rla~~~~e~~~~~si~kISfv 155 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADMEYWKEKIEQ-MTKKMPDKLIVVRGKMNNMCQTFDGVDVLGE-RLAEEVKETLYDYSIEKISFV 155 (405)
T ss_pred CCceEEEeccccccccHHHHHHHHHh-hhcCCCcceEeeeccccchhhccccceeeec-ccHHHHhhhhhccccceeeee
Confidence 34567999999999 67778766655 31111 1 1 111 11 1111222 222233322333447899999
Q ss_pred EeChhHHHHHH
Q psy6856 177 GHSMGTTMFYV 187 (370)
Q Consensus 177 GhS~GG~va~~ 187 (370)
|||+||.++-.
T Consensus 156 ghSLGGLvar~ 166 (405)
T KOG4372|consen 156 GHSLGGLVARY 166 (405)
T ss_pred eeecCCeeeeE
Confidence 99999998764
No 187
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=94.26 E-value=0.84 Score=40.26 Aligned_cols=66 Identities=12% Similarity=0.122 Sum_probs=43.6
Q ss_pred CCCeEEEeCCCCCChhHhhhccccccCCcce----ecCCCCCCcccccCCHHHHHHHHHHHcCCCCEEEEEeChhHHHHH
Q psy6856 111 NSPPVLLQHGLCLASDSWILRGQEDLGNLYK----LYPKNVNWHEHGLYDVPAMIDYILSVTRRPTLSYIGHSMGTTMFY 186 (370)
Q Consensus 111 ~~~~vlllHG~~~~~~~w~~~~~~~L~~~~~----~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~ 186 (370)
++..+|++.|++.....+..+.. ..+|. +|+++.+.+. | -.+.++++|||+|||-.+|-
T Consensus 10 ~~~LilfF~GWg~d~~~f~hL~~---~~~~D~l~~yDYr~l~~d~----~----------~~~y~~i~lvAWSmGVw~A~ 72 (213)
T PF04301_consen 10 GKELILFFAGWGMDPSPFSHLIL---PENYDVLICYDYRDLDFDF----D----------LSGYREIYLVAWSMGVWAAN 72 (213)
T ss_pred CCeEEEEEecCCCChHHhhhccC---CCCccEEEEecCccccccc----c----------cccCceEEEEEEeHHHHHHH
Confidence 35789999999999988776531 12444 3333222210 1 12457999999999999998
Q ss_pred HHHhcCh
Q psy6856 187 VMASMRP 193 (370)
Q Consensus 187 ~~a~~~p 193 (370)
.+....|
T Consensus 73 ~~l~~~~ 79 (213)
T PF04301_consen 73 RVLQGIP 79 (213)
T ss_pred HHhccCC
Confidence 8765543
No 188
>PLN02408 phospholipase A1
Probab=94.06 E-value=0.074 Score=50.64 Aligned_cols=36 Identities=25% Similarity=0.286 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHcCCC--CEEEEEeChhHHHHHHHHhcC
Q psy6856 157 VPAMIDYILSVTRRP--TLSYIGHSMGTTMFYVMASMR 192 (370)
Q Consensus 157 ~~~~i~~l~~~~~~~--~~~lvGhS~GG~va~~~a~~~ 192 (370)
+.+.|..+++..+.+ ++++.|||+||++|...|..-
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 344555666666543 599999999999999988753
No 189
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=94.03 E-value=0.04 Score=55.24 Aligned_cols=35 Identities=17% Similarity=0.332 Sum_probs=28.3
Q ss_pred CHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHh
Q psy6856 156 DVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMAS 190 (370)
Q Consensus 156 D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~ 190 (370)
.+...|+......+-+|++|+||||||.+++.+..
T Consensus 198 rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~ 232 (642)
T PLN02517 198 RLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMK 232 (642)
T ss_pred HHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHH
Confidence 45566776666666789999999999999998775
No 190
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=93.78 E-value=0.079 Score=50.57 Aligned_cols=97 Identities=18% Similarity=0.224 Sum_probs=57.0
Q ss_pred CCCeEEEeCCCCCChhHhhhcccccc-------CCcce---ecCC-CCCC-cc----cccCCHHHHHHHHHHHcCCCCEE
Q psy6856 111 NSPPVLLQHGLCLASDSWILRGQEDL-------GNLYK---LYPK-NVNW-HE----HGLYDVPAMIDYILSVTRRPTLS 174 (370)
Q Consensus 111 ~~~~vlllHG~~~~~~~w~~~~~~~L-------~~~~~---~~~~-~~~~-~~----~~~~D~~~~i~~l~~~~~~~~~~ 174 (370)
..|.++++||.|=.......+... | . .-+ +|+. ..+. ++ .-..++.+..+++++..|.+.++
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~-L~~i~~~l~-~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~ 198 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEF-LLNIYKLLP-EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGNKNII 198 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHH-HHHHHHHcC-CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCCCeEE
Confidence 469999999976555433333322 2 2 223 3332 1100 11 11235666777888778889999
Q ss_pred EEEeChhHHHHHHHHhc--Chh---hhhccceeeccccceeec
Q psy6856 175 YIGHSMGTTMFYVMASM--RPE---YNRKINLQISLAPVAYVS 212 (370)
Q Consensus 175 lvGhS~GG~va~~~a~~--~p~---~v~~l~~~~~~aP~~~~~ 212 (370)
|+|-|.||.+++.++.. ++. ..++ ++++||...+.
T Consensus 199 LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~---~iLISPWv~l~ 238 (374)
T PF10340_consen 199 LMGDSAGGNLALSFLQYLKKPNKLPYPKS---AILISPWVNLV 238 (374)
T ss_pred EEecCccHHHHHHHHHHHhhcCCCCCCce---eEEECCCcCCc
Confidence 99999999999987653 111 1233 34667766544
No 191
>KOG2183|consensus
Probab=93.51 E-value=0.16 Score=48.49 Aligned_cols=101 Identities=17% Similarity=0.130 Sum_probs=67.5
Q ss_pred CCeEEEeCCCCCChhHhhhcc-------cccc-------CCcce---ecCC----------CCCCcccccCCHHHHHHHH
Q psy6856 112 SPPVLLQHGLCLASDSWILRG-------QEDL-------GNLYK---LYPK----------NVNWHEHGLYDVPAMIDYI 164 (370)
Q Consensus 112 ~~~vlllHG~~~~~~~w~~~~-------~~~L-------~~~~~---~~~~----------~~~~~~~~~~D~~~~i~~l 164 (370)
+.||++--|+-|+.+.+..+. ++ + .++|- .-.. ++-..|.+..|.+..+..+
T Consensus 80 ~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~-~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~l 158 (492)
T KOG2183|consen 80 EGPIFFYTGNEGDIEWFANNTGFMWDLAPE-LKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFL 158 (492)
T ss_pred CCceEEEeCCcccHHHHHhccchHHhhhHh-hCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHH
Confidence 378999999988887655443 22 2 23322 1100 2222334444666666666
Q ss_pred HHHcCC--CCEEEEEeChhHHHHHHHHhcChhhhhccceeeccccceeecCCC
Q psy6856 165 LSVTRR--PTLSYIGHSMGTTMFYVMASMRPEYNRKINLQISLAPVAYVSRMK 215 (370)
Q Consensus 165 ~~~~~~--~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~aP~~~~~~~~ 215 (370)
.+.++. .+++.+|-|.||++|..+=.++|..|.+-. .+.||..+.+...
T Consensus 159 K~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAl--AaSAPvl~f~d~v 209 (492)
T KOG2183|consen 159 KRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGAL--AASAPVLYFEDTV 209 (492)
T ss_pred hhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhh--hccCceEeecCCC
Confidence 555443 589999999999999999999999887754 4788988877653
No 192
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=93.31 E-value=0.17 Score=43.51 Aligned_cols=51 Identities=14% Similarity=0.161 Sum_probs=35.9
Q ss_pred CHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhc---Chhhhhccceeeccc
Q psy6856 156 DVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASM---RPEYNRKINLQISLA 206 (370)
Q Consensus 156 D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~---~p~~v~~l~~~~~~a 206 (370)
++...++....+-.-.+++|+|+|+|+.++...+.. .+...++|..+++++
T Consensus 66 ~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfG 119 (179)
T PF01083_consen 66 NLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFG 119 (179)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES
T ss_pred HHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEec
Confidence 444455555555566799999999999999999877 344456666555444
No 193
>PLN02324 triacylglycerol lipase
Probab=93.30 E-value=0.11 Score=50.10 Aligned_cols=35 Identities=23% Similarity=0.448 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHcCC--CCEEEEEeChhHHHHHHHHhc
Q psy6856 157 VPAMIDYILSVTRR--PTLSYIGHSMGTTMFYVMASM 191 (370)
Q Consensus 157 ~~~~i~~l~~~~~~--~~~~lvGhS~GG~va~~~a~~ 191 (370)
+.+.|..+++.... .+|++.|||+||++|...|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 34455556665543 369999999999999998864
No 194
>PLN02310 triacylglycerol lipase
Probab=93.06 E-value=0.12 Score=49.97 Aligned_cols=35 Identities=23% Similarity=0.337 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHcC----CCCEEEEEeChhHHHHHHHHhc
Q psy6856 157 VPAMIDYILSVTR----RPTLSYIGHSMGTTMFYVMASM 191 (370)
Q Consensus 157 ~~~~i~~l~~~~~----~~~~~lvGhS~GG~va~~~a~~ 191 (370)
+.+.|..+++.+. ..++++.|||+||++|...|..
T Consensus 191 Vl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 191 VMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 3445555665542 2479999999999999988854
No 195
>PLN02802 triacylglycerol lipase
Probab=92.61 E-value=0.13 Score=50.74 Aligned_cols=35 Identities=17% Similarity=0.354 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHcCC--CCEEEEEeChhHHHHHHHHhc
Q psy6856 157 VPAMIDYILSVTRR--PTLSYIGHSMGTTMFYVMASM 191 (370)
Q Consensus 157 ~~~~i~~l~~~~~~--~~~~lvGhS~GG~va~~~a~~ 191 (370)
+.+.+..+++.... .+|++.|||+||++|...|..
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 44455566666543 369999999999999988865
No 196
>PLN02753 triacylglycerol lipase
Probab=92.49 E-value=0.17 Score=50.24 Aligned_cols=35 Identities=14% Similarity=0.246 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHcC-----CCCEEEEEeChhHHHHHHHHhc
Q psy6856 157 VPAMIDYILSVTR-----RPTLSYIGHSMGTTMFYVMASM 191 (370)
Q Consensus 157 ~~~~i~~l~~~~~-----~~~~~lvGhS~GG~va~~~a~~ 191 (370)
+.+.|..+++.++ ..+|++.|||+||++|...|..
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 3444555666553 2489999999999999998854
No 197
>KOG4840|consensus
Probab=92.29 E-value=0.14 Score=44.90 Aligned_cols=98 Identities=20% Similarity=0.237 Sum_probs=55.1
Q ss_pred CeEEEeCCCCCChhHhh---hcccccc-CCcce-ecCC-CCC---CcccccCCHHHHHHHHHHHcC----CCCEEEEEeC
Q psy6856 113 PPVLLQHGLCLASDSWI---LRGQEDL-GNLYK-LYPK-NVN---WHEHGLYDVPAMIDYILSVTR----RPTLSYIGHS 179 (370)
Q Consensus 113 ~~vlllHG~~~~~~~w~---~~~~~~L-~~~~~-~~~~-~~~---~~~~~~~D~~~~i~~l~~~~~----~~~~~lvGhS 179 (370)
.-|||+-|++.-.-.-. .+... | .++|+ +.+- ..+ |......|=.++++.++++++ -.+++|+|||
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~-lde~~wslVq~q~~Ssy~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL~GhS 115 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRY-LDENSWSLVQPQLRSSYNGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVLVGHS 115 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHH-HhhccceeeeeeccccccccccccccccHHHHHHHHHHhhccCcccceEEEecC
Confidence 45788877776544311 11112 2 56777 3322 111 222222222334555555542 2489999999
Q ss_pred hhHHHHHHHHhcChhhhhccceeeccccceeec
Q psy6856 180 MGTTMFYVMASMRPEYNRKINLQISLAPVAYVS 212 (370)
Q Consensus 180 ~GG~va~~~a~~~p~~v~~l~~~~~~aP~~~~~ 212 (370)
-|..-.+.+..+ .-.-+++.+.|+.||+...+
T Consensus 116 TGcQdi~yYlTn-t~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 116 TGCQDIMYYLTN-TTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred ccchHHHHHHHh-ccchHHHHHHHHhCccchhh
Confidence 999998888743 22335666677888887654
No 198
>PLN02847 triacylglycerol lipase
Probab=92.24 E-value=0.19 Score=50.52 Aligned_cols=45 Identities=20% Similarity=0.307 Sum_probs=29.7
Q ss_pred HHHHcCCCCEEEEEeChhHHHHHHHHhc---Chhhhhccceeecccccee
Q psy6856 164 ILSVTRRPTLSYIGHSMGTTMFYVMASM---RPEYNRKINLQISLAPVAY 210 (370)
Q Consensus 164 l~~~~~~~~~~lvGhS~GG~va~~~a~~---~p~~v~~l~~~~~~aP~~~ 210 (370)
.+.....-+++++|||+||++|..++.. +++ ...+.+ ++.+|.+.
T Consensus 244 al~~~PdYkLVITGHSLGGGVAALLAilLRe~~~-fssi~C-yAFgPp~c 291 (633)
T PLN02847 244 ALDEYPDFKIKIVGHSLGGGTAALLTYILREQKE-FSSTTC-VTFAPAAC 291 (633)
T ss_pred HHHHCCCCeEEEeccChHHHHHHHHHHHHhcCCC-CCCceE-EEecCchh
Confidence 3444555699999999999999988764 232 234443 45666443
No 199
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=92.18 E-value=0.53 Score=45.83 Aligned_cols=97 Identities=20% Similarity=0.259 Sum_probs=53.1
Q ss_pred CCCcEEEEEEEcCC--CCCCCeEEEeCCCCCChhHhhhccccc---cC---------Ccce---------ec-CC--CCC
Q psy6856 95 QDGYTLTMHRIVPK--YANSPPVLLQHGLCLASDSWILRGQED---LG---------NLYK---------LY-PK--NVN 148 (370)
Q Consensus 95 ~dG~~l~~~~i~~~--~~~~~~vlllHG~~~~~~~w~~~~~~~---L~---------~~~~---------~~-~~--~~~ 148 (370)
..+..+.+|.+++. ....|.||.+.|.+|++..|....+.- +. +.|+ +| |= +++
T Consensus 21 ~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS 100 (415)
T PF00450_consen 21 NENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFS 100 (415)
T ss_dssp TTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-
T ss_pred CCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEeecCceEEe
Confidence 35667778888754 356799999999999999874433221 11 1111 22 11 333
Q ss_pred Cccccc----------CCHHHHHHHHHHH---cCCCCEEEEEeChhHHHHHHHHhc
Q psy6856 149 WHEHGL----------YDVPAMIDYILSV---TRRPTLSYIGHSMGTTMFYVMASM 191 (370)
Q Consensus 149 ~~~~~~----------~D~~~~i~~l~~~---~~~~~~~lvGhS~GG~va~~~a~~ 191 (370)
...... .|+..++.....+ +...++++.|.|.||.-+..+|.+
T Consensus 101 ~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~ 156 (415)
T PF00450_consen 101 YGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASY 156 (415)
T ss_dssp EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHH
T ss_pred eccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHh
Confidence 322111 1222333333333 344699999999999988877765
No 200
>PLN02719 triacylglycerol lipase
Probab=92.11 E-value=0.16 Score=50.16 Aligned_cols=35 Identities=17% Similarity=0.229 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHcCC-----CCEEEEEeChhHHHHHHHHhc
Q psy6856 157 VPAMIDYILSVTRR-----PTLSYIGHSMGTTMFYVMASM 191 (370)
Q Consensus 157 ~~~~i~~l~~~~~~-----~~~~lvGhS~GG~va~~~a~~ 191 (370)
+.+.|..+++.+.. .+|++.|||+||++|...|..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 34455555555532 379999999999999998864
No 201
>PLN02761 lipase class 3 family protein
Probab=92.03 E-value=0.17 Score=50.13 Aligned_cols=35 Identities=23% Similarity=0.309 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHcC------CCCEEEEEeChhHHHHHHHHhc
Q psy6856 157 VPAMIDYILSVTR------RPTLSYIGHSMGTTMFYVMASM 191 (370)
Q Consensus 157 ~~~~i~~l~~~~~------~~~~~lvGhS~GG~va~~~a~~ 191 (370)
+.+.|..+++.++ ..+|++.|||+||++|...|..
T Consensus 274 Vl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 274 VLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 4455566666552 2379999999999999988754
No 202
>KOG3967|consensus
Probab=91.92 E-value=0.33 Score=42.32 Aligned_cols=39 Identities=13% Similarity=0.206 Sum_probs=30.2
Q ss_pred HHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 162 DYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 162 ~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
..++.....+.+++|.||.||...+.+..+.|+. +++..
T Consensus 181 ~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d-~~v~a 219 (297)
T KOG3967|consen 181 KNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDD-ESVFA 219 (297)
T ss_pred HHHhcccCcceEEEEEeccCChhHHHHHHhcCCc-cceEE
Confidence 3334445668999999999999999999999875 45443
No 203
>PLN03037 lipase class 3 family protein; Provisional
Probab=91.62 E-value=0.22 Score=49.30 Aligned_cols=34 Identities=18% Similarity=0.297 Sum_probs=24.7
Q ss_pred HHHHHHHHHHcC----CCCEEEEEeChhHHHHHHHHhc
Q psy6856 158 PAMIDYILSVTR----RPTLSYIGHSMGTTMFYVMASM 191 (370)
Q Consensus 158 ~~~i~~l~~~~~----~~~~~lvGhS~GG~va~~~a~~ 191 (370)
.+.|..+++.+. ..++++.|||+||++|...|..
T Consensus 301 l~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 301 MEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 345555555543 2379999999999999988854
No 204
>KOG1516|consensus
Probab=91.01 E-value=0.83 Score=46.40 Aligned_cols=107 Identities=13% Similarity=0.104 Sum_probs=59.4
Q ss_pred CCCCcEEEEEEEcCCCCC--CCeEEEeCCCCCChhH---hhhcccccc-CC-cce---ecCC-----------CCCCccc
Q psy6856 94 TQDGYTLTMHRIVPKYAN--SPPVLLQHGLCLASDS---WILRGQEDL-GN-LYK---LYPK-----------NVNWHEH 152 (370)
Q Consensus 94 t~dG~~l~~~~i~~~~~~--~~~vlllHG~~~~~~~---w~~~~~~~L-~~-~~~---~~~~-----------~~~~~~~ 152 (370)
.+|-..|.++.-.. ... .|++|++||.+-..+. +.......+ .. ..- +.+| .......
T Consensus 93 sEDCLylNV~tp~~-~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~ 171 (545)
T KOG1516|consen 93 SEDCLYLNVYTPQG-CSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNL 171 (545)
T ss_pred cCCCceEEEeccCC-CccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcc
Confidence 45665566544322 222 6899999997543332 211111101 11 111 2333 1112345
Q ss_pred ccCCHHHHHHHHHHHc-----CCCCEEEEEeChhHHHHHHHHhcC--hhhhhccce
Q psy6856 153 GLYDVPAMIDYILSVT-----RRPTLSYIGHSMGTTMFYVMASMR--PEYNRKINL 201 (370)
Q Consensus 153 ~~~D~~~~i~~l~~~~-----~~~~~~lvGhS~GG~va~~~a~~~--p~~v~~l~~ 201 (370)
+..|...+++++.+.. +.++|+++|||.||+.+-.+...- ..+.++.+.
T Consensus 172 gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~ 227 (545)
T KOG1516|consen 172 GLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAIS 227 (545)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHh
Confidence 5668888888885553 347899999999999987776541 123455544
No 205
>KOG4569|consensus
Probab=90.86 E-value=0.29 Score=46.54 Aligned_cols=37 Identities=16% Similarity=0.204 Sum_probs=31.4
Q ss_pred CCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhc
Q psy6856 155 YDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASM 191 (370)
Q Consensus 155 ~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~ 191 (370)
..+.+.++.+++...--++++-|||+||++|...|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 3566778888888887899999999999999988865
No 206
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=90.28 E-value=0.36 Score=47.59 Aligned_cols=57 Identities=23% Similarity=0.212 Sum_probs=37.3
Q ss_pred ccccCCHHHHHHHHHHHc---CCCCEEEEEeChhHHHHHHHHhcChhhhhccceeeccccce
Q psy6856 151 EHGLYDVPAMIDYILSVT---RRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQISLAPVA 209 (370)
Q Consensus 151 ~~~~~D~~~~i~~l~~~~---~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~aP~~ 209 (370)
+.+..|++..++++.... ...|++++|-|.||++|..+-.++|+.+.+.+ ...||+-
T Consensus 90 ~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~--ASSapv~ 149 (434)
T PF05577_consen 90 EQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAW--ASSAPVQ 149 (434)
T ss_dssp HHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEE--EET--CC
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEE--eccceee
Confidence 334456777777766554 33589999999999999999999999876654 2455543
No 207
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=90.22 E-value=0.44 Score=40.81 Aligned_cols=46 Identities=20% Similarity=0.257 Sum_probs=32.8
Q ss_pred CHHHHHHHHHHHc-CCCCEEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 156 DVPAMIDYILSVT-RRPTLSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 156 D~~~~i~~l~~~~-~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
++...++.|.... +..++.++|||.|+.++-..+...+-.++.++.
T Consensus 93 ~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~ 139 (177)
T PF06259_consen 93 RLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVL 139 (177)
T ss_pred HHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEE
Confidence 3444555554334 446899999999999998888775666788765
No 208
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=89.05 E-value=0.63 Score=44.54 Aligned_cols=82 Identities=12% Similarity=0.003 Sum_probs=51.5
Q ss_pred CeEEEeCCCCCChhHhhhcccccc-CCcce-ecCC-------CCCCcccccCCHHHHHHHHHHHcCCCCEEEEEeChhHH
Q psy6856 113 PPVLLQHGLCLASDSWILRGQEDL-GNLYK-LYPK-------NVNWHEHGLYDVPAMIDYILSVTRRPTLSYIGHSMGTT 183 (370)
Q Consensus 113 ~~vlllHG~~~~~~~w~~~~~~~L-~~~~~-~~~~-------~~~~~~~~~~D~~~~i~~l~~~~~~~~~~lvGhS~GG~ 183 (370)
..-||..|=+|-.+-=..+... | .+|+. +..| ..++++.+. |+...+.+...+.+..++.|+|+|+|+=
T Consensus 261 ~~av~~SGDGGWr~lDk~v~~~-l~~~gvpVvGvdsLRYfW~~rtPe~~a~-Dl~r~i~~y~~~w~~~~~~liGySfGAD 338 (456)
T COG3946 261 TVAVFYSGDGGWRDLDKEVAEA-LQKQGVPVVGVDSLRYFWSERTPEQIAA-DLSRLIRFYARRWGAKRVLLIGYSFGAD 338 (456)
T ss_pred eEEEEEecCCchhhhhHHHHHH-HHHCCCceeeeehhhhhhccCCHHHHHH-HHHHHHHHHHHhhCcceEEEEeecccch
Confidence 4455556544433332333344 5 56666 4444 334444444 7888888888888999999999999998
Q ss_pred HHHHHHhcChhhh
Q psy6856 184 MFYVMASMRPEYN 196 (370)
Q Consensus 184 va~~~a~~~p~~v 196 (370)
+.-..-.+-|...
T Consensus 339 vlP~~~n~L~~~~ 351 (456)
T COG3946 339 VLPFAYNRLPPAT 351 (456)
T ss_pred hhHHHHHhCCHHH
Confidence 8766555545443
No 209
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=88.89 E-value=0.65 Score=35.90 Aligned_cols=29 Identities=10% Similarity=0.028 Sum_probs=26.2
Q ss_pred CCCcEEEEeeCCCcccCHHhHHhcccccC
Q psy6856 341 ITAPVALFYSNNDYLSHPACNQHGALNRE 369 (370)
Q Consensus 341 I~~PvLli~G~~D~lv~~~~~~~L~~~~~ 369 (370)
-+.|+|++.++.|..+|.+.+++++++.+
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~~~~~l~ 61 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARAMAARLP 61 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHHHHHHCC
Confidence 35899999999999999999999988764
No 210
>PLN02209 serine carboxypeptidase
Probab=88.38 E-value=1.4 Score=43.37 Aligned_cols=34 Identities=12% Similarity=-0.016 Sum_probs=25.8
Q ss_pred CCCcEEEEEEEcCC--CCCCCeEEEeCCCCCChhHh
Q psy6856 95 QDGYTLTMHRIVPK--YANSPPVLLQHGLCLASDSW 128 (370)
Q Consensus 95 ~dG~~l~~~~i~~~--~~~~~~vlllHG~~~~~~~w 128 (370)
..|..+.+|+.++. ....|.|+.+-|.+|++..+
T Consensus 49 ~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~ 84 (437)
T PLN02209 49 EENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLS 84 (437)
T ss_pred CCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhh
Confidence 44666777887754 23568999999999999875
No 211
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=87.79 E-value=1.2 Score=42.75 Aligned_cols=32 Identities=13% Similarity=0.069 Sum_probs=27.6
Q ss_pred CCCCCCcEEEEeeCCCcccCHHhHHhcccccC
Q psy6856 338 LSAITAPVALFYSNNDYLSHPACNQHGALNRE 369 (370)
Q Consensus 338 l~~I~~PvLli~G~~D~lv~~~~~~~L~~~~~ 369 (370)
..++++|.++|.|.+|....|++.....+..+
T Consensus 258 ~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~ 289 (367)
T PF10142_consen 258 RDRLTMPKYIINATGDEFFVPDSSNFYYDKLP 289 (367)
T ss_pred HHhcCccEEEEecCCCceeccCchHHHHhhCC
Confidence 45678999999999999999999988776655
No 212
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=87.23 E-value=2.2 Score=42.12 Aligned_cols=96 Identities=15% Similarity=0.119 Sum_probs=54.9
Q ss_pred CCcEEEEEEEcCC--CCCCCeEEEeCCCCCChhH---hhhccccc------------c-CCcce---------ecCC---
Q psy6856 96 DGYTLTMHRIVPK--YANSPPVLLQHGLCLASDS---WILRGQED------------L-GNLYK---------LYPK--- 145 (370)
Q Consensus 96 dG~~l~~~~i~~~--~~~~~~vlllHG~~~~~~~---w~~~~~~~------------L-~~~~~---------~~~~--- 145 (370)
.|..+.+|+.++. ....|.|+.+-|.+|++.. |..+.+-. | .+.++ +|..
T Consensus 48 ~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGt 127 (433)
T PLN03016 48 ENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGS 127 (433)
T ss_pred CCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCC
Confidence 3566777877754 3356899999999999984 44444431 1 11222 2211
Q ss_pred CCCCccc---ccCCHH------HHHHHHHHHc---CCCCEEEEEeChhHHHHHHHHhc
Q psy6856 146 NVNWHEH---GLYDVP------AMIDYILSVT---RRPTLSYIGHSMGTTMFYVMASM 191 (370)
Q Consensus 146 ~~~~~~~---~~~D~~------~~i~~l~~~~---~~~~~~lvGhS~GG~va~~~a~~ 191 (370)
++++.+. ...|.. .++...+++. ...++++.|.|.||..+..+|.+
T Consensus 128 GfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~ 185 (433)
T PLN03016 128 GFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQE 185 (433)
T ss_pred CccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHH
Confidence 4443211 111322 2333333332 34689999999999877777654
No 213
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=86.42 E-value=3.8 Score=40.56 Aligned_cols=85 Identities=22% Similarity=0.189 Sum_probs=52.2
Q ss_pred CCCCeEEEeCCCCCChhHhhhccc---ccc--C-------Ccce---------ec-CC--CCCCc--c-------cccCC
Q psy6856 110 ANSPPVLLQHGLCLASDSWILRGQ---EDL--G-------NLYK---------LY-PK--NVNWH--E-------HGLYD 156 (370)
Q Consensus 110 ~~~~~vlllHG~~~~~~~w~~~~~---~~L--~-------~~~~---------~~-~~--~~~~~--~-------~~~~D 156 (370)
.+.|.++.+.|.+|++..|..... ..+ + +-++ +| |= +|+.. + -...|
T Consensus 99 ~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D 178 (498)
T COG2939 99 ANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGKD 178 (498)
T ss_pred CCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccchh
Confidence 357889999999999998866543 211 1 1122 22 11 44432 1 11225
Q ss_pred HHHHHHHHHHHc---CC--CCEEEEEeChhHHHHHHHHhcChh
Q psy6856 157 VPAMIDYILSVT---RR--PTLSYIGHSMGTTMFYVMASMRPE 194 (370)
Q Consensus 157 ~~~~i~~l~~~~---~~--~~~~lvGhS~GG~va~~~a~~~p~ 194 (370)
+....+.+.+.+ .. .+.+|+|.|.||.-+..+|..-.+
T Consensus 179 ~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~ 221 (498)
T COG2939 179 VYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLE 221 (498)
T ss_pred HHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHH
Confidence 555555554442 33 499999999999999988875443
No 214
>KOG1282|consensus
Probab=86.33 E-value=2.1 Score=42.29 Aligned_cols=97 Identities=16% Similarity=0.078 Sum_probs=56.5
Q ss_pred CCCcEEEEEEEcCC--CCCCCeEEEeCCCCCChhHh---hhccccc-------c-CCcce---------ecCC---CCCC
Q psy6856 95 QDGYTLTMHRIVPK--YANSPPVLLQHGLCLASDSW---ILRGQED-------L-GNLYK---------LYPK---NVNW 149 (370)
Q Consensus 95 ~dG~~l~~~~i~~~--~~~~~~vlllHG~~~~~~~w---~~~~~~~-------L-~~~~~---------~~~~---~~~~ 149 (370)
++|..|.+|.+++. +...|.||.+-|.+|++..- .+++|-. | .+.|+ ++.. +|++
T Consensus 54 ~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSY 133 (454)
T KOG1282|consen 54 SEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGFSY 133 (454)
T ss_pred CCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCccc
Confidence 46888999999864 23478999999999999743 2333321 1 11122 1111 3332
Q ss_pred cc----------cccCCHHHHHHHHHHH---cCCCCEEEEEeChhHHHHHHHHhc
Q psy6856 150 HE----------HGLYDVPAMIDYILSV---TRRPTLSYIGHSMGTTMFYVMASM 191 (370)
Q Consensus 150 ~~----------~~~~D~~~~i~~l~~~---~~~~~~~lvGhS~GG~va~~~a~~ 191 (370)
.. .+..|.-.++...+++ ....++++.|.|-+|...-.+|.+
T Consensus 134 s~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~ 188 (454)
T KOG1282|consen 134 SNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQE 188 (454)
T ss_pred cCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHH
Confidence 11 1111333333333444 344799999999999877777754
No 215
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=85.87 E-value=0.88 Score=43.22 Aligned_cols=27 Identities=22% Similarity=0.426 Sum_probs=22.2
Q ss_pred cCCCCEEEEEeChhHHHHHHHHhcChh
Q psy6856 168 TRRPTLSYIGHSMGTTMFYVMASMRPE 194 (370)
Q Consensus 168 ~~~~~~~lvGhS~GG~va~~~a~~~p~ 194 (370)
.|.++++|||||+|+.+.+.+...-.+
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~ 243 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAE 243 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHh
Confidence 477899999999999999987765444
No 216
>KOG4540|consensus
Probab=84.61 E-value=1 Score=41.10 Aligned_cols=35 Identities=11% Similarity=0.199 Sum_probs=27.3
Q ss_pred HHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcC
Q psy6856 158 PAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMR 192 (370)
Q Consensus 158 ~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~ 192 (370)
.+.+..+++...-.++.+-|||+||++|..+..++
T Consensus 263 ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 263 LDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHHHHHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 33444556667778999999999999998887765
No 217
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=84.61 E-value=1 Score=41.10 Aligned_cols=35 Identities=11% Similarity=0.199 Sum_probs=27.3
Q ss_pred HHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcC
Q psy6856 158 PAMIDYILSVTRRPTLSYIGHSMGTTMFYVMASMR 192 (370)
Q Consensus 158 ~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~ 192 (370)
.+.+..+++...-.++.+-|||+||++|..+..++
T Consensus 263 ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 263 LDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHHHHHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 33444556667778999999999999998887765
No 218
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=83.58 E-value=0.73 Score=42.46 Aligned_cols=37 Identities=16% Similarity=0.107 Sum_probs=30.3
Q ss_pred CCEEEEEeChhHHHHHHHHhcChhhhhccceeecccccee
Q psy6856 171 PTLSYIGHSMGTTMFYVMASMRPEYNRKINLQISLAPVAY 210 (370)
Q Consensus 171 ~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~aP~~~ 210 (370)
+.-+|.|-|+||.+++..+.+||+.+..++ ..||...
T Consensus 177 ~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~---s~Sps~~ 213 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGLRHPERFGHVL---SQSGSFW 213 (299)
T ss_pred CCcEEeccccccHHHHHHHhcCchhhceee---ccCCccc
Confidence 467899999999999999999999887764 4555544
No 219
>KOG2551|consensus
Probab=79.61 E-value=3.2 Score=36.59 Aligned_cols=31 Identities=10% Similarity=0.139 Sum_probs=26.6
Q ss_pred CCCCCCcEEEEeeCCCcccCHHhHHhccccc
Q psy6856 338 LSAITAPVALFYSNNDYLSHPACNQHGALNR 368 (370)
Q Consensus 338 l~~I~~PvLli~G~~D~lv~~~~~~~L~~~~ 368 (370)
...|+||.|-|.|+.|.+++.+.++.|++.-
T Consensus 159 ~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~ 189 (230)
T KOG2551|consen 159 KRPLSTPSLHIFGETDTIVPSERSEQLAESF 189 (230)
T ss_pred ccCCCCCeeEEecccceeecchHHHHHHHhc
Confidence 4568999999999999999999888887653
No 220
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=76.58 E-value=3.4 Score=39.92 Aligned_cols=30 Identities=23% Similarity=0.216 Sum_probs=26.7
Q ss_pred CCEEEEEeChhHHHHHHHHhcChhhhhccc
Q psy6856 171 PTLSYIGHSMGTTMFYVMASMRPEYNRKIN 200 (370)
Q Consensus 171 ~~~~lvGhS~GG~va~~~a~~~p~~v~~l~ 200 (370)
-+++++|+|-||.+|...|.-.|..++.++
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~i 213 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVI 213 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEE
Confidence 389999999999999999998998877764
No 221
>KOG3253|consensus
Probab=76.54 E-value=3.3 Score=41.78 Aligned_cols=35 Identities=11% Similarity=0.149 Sum_probs=25.0
Q ss_pred HcCCCCEEEEEeChhHHHHHHHHhcChh-hhhccce
Q psy6856 167 VTRRPTLSYIGHSMGTTMFYVMASMRPE-YNRKINL 201 (370)
Q Consensus 167 ~~~~~~~~lvGhS~GG~va~~~a~~~p~-~v~~l~~ 201 (370)
++...+|+|+|.|||..++.+....+-+ .|+.+++
T Consensus 246 efpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVC 281 (784)
T KOG3253|consen 246 EFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVC 281 (784)
T ss_pred cCCCCceEEEecccCceeeEEeccccCCceEEEEEE
Confidence 3566899999999998888777665443 2555554
No 222
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=74.18 E-value=1.9 Score=39.06 Aligned_cols=32 Identities=16% Similarity=0.047 Sum_probs=26.9
Q ss_pred CCCCC-CcEEEEeeCCCcccCHHhHHhcccccC
Q psy6856 338 LSAIT-APVALFYSNNDYLSHPACNQHGALNRE 369 (370)
Q Consensus 338 l~~I~-~PvLli~G~~D~lv~~~~~~~L~~~~~ 369 (370)
+.+|. +|+|+++|.+|.+||.+.++.+.+...
T Consensus 227 ~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~ 259 (299)
T COG1073 227 AEKISPRPVLLVHGERDEVVPLRDAEDLYEAAR 259 (299)
T ss_pred HhhcCCcceEEEecCCCcccchhhhHHHHhhhc
Confidence 55666 899999999999999999988876544
No 223
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=69.05 E-value=9.1 Score=34.13 Aligned_cols=24 Identities=13% Similarity=0.029 Sum_probs=19.7
Q ss_pred CCCCEEEEEeChhHHHHHHHHhcC
Q psy6856 169 RRPTLSYIGHSMGTTMFYVMASMR 192 (370)
Q Consensus 169 ~~~~~~lvGhS~GG~va~~~a~~~ 192 (370)
..++++++|+|+|+.++-..+.+.
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHHHHH
Confidence 347899999999999998866553
No 224
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=68.43 E-value=5.9 Score=33.59 Aligned_cols=42 Identities=17% Similarity=0.114 Sum_probs=33.5
Q ss_pred HHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhccce
Q psy6856 160 MIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKINL 201 (370)
Q Consensus 160 ~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~ 201 (370)
.-.+++++.=.....+-|.||||..|..+.-+||+...+++.
T Consensus 90 yerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvia 131 (227)
T COG4947 90 YERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIA 131 (227)
T ss_pred HHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhhee
Confidence 344566654335688899999999999999999999888865
No 225
>KOG2029|consensus
Probab=68.16 E-value=6.5 Score=39.72 Aligned_cols=23 Identities=26% Similarity=0.397 Sum_probs=18.3
Q ss_pred cC-CCCEEEEEeChhHHHHHHHHh
Q psy6856 168 TR-RPTLSYIGHSMGTTMFYVMAS 190 (370)
Q Consensus 168 ~~-~~~~~lvGhS~GG~va~~~a~ 190 (370)
+| .+++.++||||||..+=.+..
T Consensus 522 VG~~RPivwI~HSmGGLl~K~lLl 545 (697)
T KOG2029|consen 522 VGDDRPIVWIGHSMGGLLAKKLLL 545 (697)
T ss_pred cCCCCceEEEecccchHHHHHHHH
Confidence 34 468999999999988876554
No 226
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=67.89 E-value=8.4 Score=34.73 Aligned_cols=67 Identities=12% Similarity=0.173 Sum_probs=37.7
Q ss_pred Hhhhcccccc-CCcce-ecCC-CCCCccccc-----CCHHHHHHHHHHHcCC----CCEEEEEeChhHHHHHHHHhcChh
Q psy6856 127 SWILRGQEDL-GNLYK-LYPK-NVNWHEHGL-----YDVPAMIDYILSVTRR----PTLSYIGHSMGTTMFYVMASMRPE 194 (370)
Q Consensus 127 ~w~~~~~~~L-~~~~~-~~~~-~~~~~~~~~-----~D~~~~i~~l~~~~~~----~~~~lvGhS~GG~va~~~a~~~p~ 194 (370)
.|+...+. | .+||. ++.. ..+++.... ......++.+.+..+. -+++-+|||||+-+-+.+.+..+.
T Consensus 35 tYr~lLe~-La~~Gy~ViAtPy~~tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~ 113 (250)
T PF07082_consen 35 TYRYLLER-LADRGYAVIATPYVVTFDHQAIAREVWERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDV 113 (250)
T ss_pred HHHHHHHH-HHhCCcEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhhccC
Confidence 45555665 6 66888 4433 333332221 1222233333333222 267889999999998888777643
No 227
>KOG2551|consensus
Probab=67.66 E-value=4.3 Score=35.84 Aligned_cols=34 Identities=15% Similarity=0.376 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHcC-CCCE-EEEEeChhHHHHHHHHh
Q psy6856 157 VPAMIDYILSVTR-RPTL-SYIGHSMGTTMFYVMAS 190 (370)
Q Consensus 157 ~~~~i~~l~~~~~-~~~~-~lvGhS~GG~va~~~a~ 190 (370)
....++++.+... ..++ -++|.|+|++++..++.
T Consensus 88 ~eesl~yl~~~i~enGPFDGllGFSQGA~laa~l~~ 123 (230)
T KOG2551|consen 88 FEESLEYLEDYIKENGPFDGLLGFSQGAALAALLAG 123 (230)
T ss_pred hHHHHHHHHHHHHHhCCCccccccchhHHHHHHhhc
Confidence 3445666644421 1233 48999999999988887
No 228
>KOG2182|consensus
Probab=63.88 E-value=11 Score=37.22 Aligned_cols=99 Identities=17% Similarity=0.126 Sum_probs=63.4
Q ss_pred CCCCCeEEEeCCCCCChhHhhhccccc-------c-------CCcce-ecCC---------CCCCcccccCCHHHHHHHH
Q psy6856 109 YANSPPVLLQHGLCLASDSWILRGQED-------L-------GNLYK-LYPK---------NVNWHEHGLYDVPAMIDYI 164 (370)
Q Consensus 109 ~~~~~~vlllHG~~~~~~~w~~~~~~~-------L-------~~~~~-~~~~---------~~~~~~~~~~D~~~~i~~l 164 (370)
.+.+|.-|++-|-+.....|..+.... . .++|- .+.+ .+-..+.+.+|++..|+.+
T Consensus 83 ~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred cCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 456788888888888887775554321 1 22211 1101 1112233456778887777
Q ss_pred HHHcCC---CCEEEEEeChhHHHHHHHHhcChhhhhccceeeccccce
Q psy6856 165 LSVTRR---PTLSYIGHSMGTTMFYVMASMRPEYNRKINLQISLAPVA 209 (370)
Q Consensus 165 ~~~~~~---~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~aP~~ 209 (370)
-.+.+. .|.+.+|-|.-|.++..+=..+||.+.+-+ ...||+.
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~Gsv--ASSapv~ 208 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSV--ASSAPVL 208 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeec--cccccee
Confidence 666533 389999999999999999999999876654 2455553
No 229
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=63.09 E-value=6.9 Score=33.69 Aligned_cols=30 Identities=20% Similarity=0.235 Sum_probs=22.6
Q ss_pred cCCCCCCcEEEEeeCCCcccCHHhHHhccc
Q psy6856 337 NLSAITAPVALFYSNNDYLSHPACNQHGAL 366 (370)
Q Consensus 337 ~l~~I~~PvLli~G~~D~lv~~~~~~~L~~ 366 (370)
.+.++++|+++++|++|.+.|....+...+
T Consensus 216 ~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~ 245 (282)
T COG0596 216 ALARITVPTLIIHGEDDPVVPAELARRLAA 245 (282)
T ss_pred hhccCCCCeEEEecCCCCcCCHHHHHHHHh
Confidence 367889999999999997777655444433
No 230
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=61.78 E-value=9.2 Score=38.23 Aligned_cols=40 Identities=23% Similarity=0.071 Sum_probs=33.7
Q ss_pred CCCCEEEEEeChhHHHHHHHHhcChhhhhccceeeccccceee
Q psy6856 169 RRPTLSYIGHSMGTTMFYVMASMRPEYNRKINLQISLAPVAYV 211 (370)
Q Consensus 169 ~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~aP~~~~ 211 (370)
..+.-++.|.|.||.-++..|.++|+..++|+ +-+|+...
T Consensus 113 ~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIl---AgaPA~~~ 152 (474)
T PF07519_consen 113 APKYSYFSGCSTGGRQGLMAAQRYPEDFDGIL---AGAPAINW 152 (474)
T ss_pred CCCceEEEEeCCCcchHHHHHHhChhhcCeEE---eCCchHHH
Confidence 44678999999999999999999999999985 56776543
No 231
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=57.06 E-value=17 Score=33.56 Aligned_cols=29 Identities=17% Similarity=0.164 Sum_probs=24.1
Q ss_pred HHHHHcCCCCEEEEEeChhHHHHHHHHhc
Q psy6856 163 YILSVTRRPTLSYIGHSMGTTMFYVMASM 191 (370)
Q Consensus 163 ~l~~~~~~~~~~lvGhS~GG~va~~~a~~ 191 (370)
.++...|+++-.++|||+|-..|+.++..
T Consensus 74 ~~l~~~Gi~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 74 RLWRSWGVRPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HHHHHcCCcccEEEecCHHHHHHHHHhCC
Confidence 44567899999999999999999877654
No 232
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=55.54 E-value=7.6 Score=34.71 Aligned_cols=29 Identities=21% Similarity=0.094 Sum_probs=25.6
Q ss_pred CCCCcEEEEeeCCCcccCHHhHHhccccc
Q psy6856 340 AITAPVALFYSNNDYLSHPACNQHGALNR 368 (370)
Q Consensus 340 ~I~~PvLli~G~~D~lv~~~~~~~L~~~~ 368 (370)
..++|-|.+++++|.+++.++++++++.+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~ 204 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEA 204 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHH
Confidence 45699999999999999999999987654
No 233
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=54.97 E-value=19 Score=33.19 Aligned_cols=31 Identities=19% Similarity=0.027 Sum_probs=24.7
Q ss_pred HHHHHHHcCCCCEEEEEeChhHHHHHHHHhc
Q psy6856 161 IDYILSVTRRPTLSYIGHSMGTTMFYVMASM 191 (370)
Q Consensus 161 i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~ 191 (370)
+-.++...|+++-.++|||+|=..|+..+.-
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhCC
Confidence 3444666789999999999999988887754
No 234
>KOG1202|consensus
Probab=51.68 E-value=24 Score=38.98 Aligned_cols=83 Identities=22% Similarity=0.235 Sum_probs=51.8
Q ss_pred CCCCCeEEEeCCCCCChhHhhhccccccC-CcceecCC-CCCCcccccCCHHH-HHHHHHHHcCCCCEEEEEeChhHHHH
Q psy6856 109 YANSPPVLLQHGLCLASDSWILRGQEDLG-NLYKLYPK-NVNWHEHGLYDVPA-MIDYILSVTRRPTLSYIGHSMGTTMF 185 (370)
Q Consensus 109 ~~~~~~vlllHG~~~~~~~w~~~~~~~L~-~~~~~~~~-~~~~~~~~~~D~~~-~i~~l~~~~~~~~~~lvGhS~GG~va 185 (370)
....||++|+|-+-|...-...++.. |. ..|.+... .-+.+ ...++++ .|+.+.+.-...+..++|+|.|+.++
T Consensus 2120 ~se~~~~Ffv~pIEG~tt~l~~la~r-le~PaYglQ~T~~vP~d--Sies~A~~yirqirkvQP~GPYrl~GYSyG~~l~ 2196 (2376)
T KOG1202|consen 2120 QSEEPPLFFVHPIEGFTTALESLASR-LEIPAYGLQCTEAVPLD--SIESLAAYYIRQIRKVQPEGPYRLAGYSYGACLA 2196 (2376)
T ss_pred cccCCceEEEeccccchHHHHHHHhh-cCCcchhhhccccCCcc--hHHHHHHHHHHHHHhcCCCCCeeeeccchhHHHH
Confidence 35789999999999998888777776 51 12321111 00000 1112222 34444333455689999999999999
Q ss_pred HHHHhcChh
Q psy6856 186 YVMASMRPE 194 (370)
Q Consensus 186 ~~~a~~~p~ 194 (370)
..+|..-.+
T Consensus 2197 f~ma~~Lqe 2205 (2376)
T KOG1202|consen 2197 FEMASQLQE 2205 (2376)
T ss_pred HHHHHHHHh
Confidence 999876443
No 235
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=51.39 E-value=22 Score=32.54 Aligned_cols=30 Identities=23% Similarity=0.088 Sum_probs=23.9
Q ss_pred HHHHHcC-CCCEEEEEeChhHHHHHHHHhcC
Q psy6856 163 YILSVTR-RPTLSYIGHSMGTTMFYVMASMR 192 (370)
Q Consensus 163 ~l~~~~~-~~~~~lvGhS~GG~va~~~a~~~ 192 (370)
.++...| +++-.++|||+|=..|+.++.-.
T Consensus 74 ~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~l 104 (290)
T TIGR00128 74 LKLKEQGGLKPDFAAGHSLGEYSALVAAGAL 104 (290)
T ss_pred HHHHHcCCCCCCEEeecCHHHHHHHHHhCCC
Confidence 3455667 99999999999999888877543
No 236
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=51.34 E-value=13 Score=34.84 Aligned_cols=31 Identities=26% Similarity=0.248 Sum_probs=24.8
Q ss_pred HHHHHHHcCCCCEEEEEeChhHHHHHHHHhc
Q psy6856 161 IDYILSVTRRPTLSYIGHSMGTTMFYVMASM 191 (370)
Q Consensus 161 i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~ 191 (370)
+-.++...|+++-.++|||+|=..|+..|..
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHTTS
T ss_pred hhhhhcccccccceeeccchhhHHHHHHCCc
Confidence 3445677899999999999999988876643
No 237
>KOG3253|consensus
Probab=50.32 E-value=12 Score=37.93 Aligned_cols=35 Identities=17% Similarity=0.202 Sum_probs=30.3
Q ss_pred CCccCCCCCCcEEEEeeCCCcccCHHhHHhccccc
Q psy6856 334 PRYNLSAITAPVALFYSNNDYLSHPACNQHGALNR 368 (370)
Q Consensus 334 ~~~~l~~I~~PvLli~G~~D~lv~~~~~~~L~~~~ 368 (370)
++.++-.++.|+|++.|.+|.+|+++..+.++++.
T Consensus 296 rDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKM 330 (784)
T KOG3253|consen 296 RDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKM 330 (784)
T ss_pred cchhhHhcCCceEEEecCCcccCCHHHHHHHHHHh
Confidence 34467889999999999999999999999888654
No 238
>KOG1283|consensus
Probab=46.34 E-value=67 Score=30.27 Aligned_cols=30 Identities=17% Similarity=0.030 Sum_probs=23.6
Q ss_pred cCCCCEEEEEeChhHHHHHHHHhcChhhhh
Q psy6856 168 TRRPTLSYIGHSMGTTMFYVMASMRPEYNR 197 (370)
Q Consensus 168 ~~~~~~~lvGhS~GG~va~~~a~~~p~~v~ 197 (370)
+...+++++..|.||-+|..++...-+.++
T Consensus 119 ~~t~P~~If~ESYGGKma~k~al~l~~aIk 148 (414)
T KOG1283|consen 119 FKTVPLYIFCESYGGKMAAKFALELDDAIK 148 (414)
T ss_pred ccccceEEEEhhcccchhhhhhhhHHHHHh
Confidence 455799999999999999988876544443
No 239
>KOG1551|consensus
Probab=43.09 E-value=15 Score=33.53 Aligned_cols=29 Identities=21% Similarity=0.273 Sum_probs=25.0
Q ss_pred cCCCCEEEEEeChhHHHHHHHHhcChhhh
Q psy6856 168 TRRPTLSYIGHSMGTTMFYVMASMRPEYN 196 (370)
Q Consensus 168 ~~~~~~~lvGhS~GG~va~~~a~~~p~~v 196 (370)
.|..++.++|.||||-+|-...+.|+.-+
T Consensus 192 ~g~g~~~~~g~Smgg~~a~~vgS~~q~Pv 220 (371)
T KOG1551|consen 192 DGLGNLNLVGRSMGGDIANQVGSLHQKPV 220 (371)
T ss_pred cCcccceeeeeecccHHHHhhcccCCCCc
Confidence 57789999999999999999999877543
No 240
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=41.85 E-value=58 Score=32.44 Aligned_cols=98 Identities=15% Similarity=0.051 Sum_probs=56.8
Q ss_pred ECCCCcEEEEEEEcCCCCCCCeEEEeCCCCCChhHhhhc--cccccCCcce--ecCC--CCCC----cccccCCHHHHHH
Q psy6856 93 KTQDGYTLTMHRIVPKYANSPPVLLQHGLCLASDSWILR--GQEDLGNLYK--LYPK--NVNW----HEHGLYDVPAMID 162 (370)
Q Consensus 93 ~t~dG~~l~~~~i~~~~~~~~~vlllHG~~~~~~~w~~~--~~~~L~~~~~--~~~~--~~~~----~~~~~~D~~~~i~ 162 (370)
.++.+..+.++.-| |+-++|..|.+-|+-. ++.++.. +.. |+.-+- -|+| +..+ +++ ..-+.+.|.
T Consensus 271 ~D~~reEi~yYFnP-GD~KPPL~VYFSGyR~-aEGFEgy~MMk~-Lg~PfLL~~DpRleGGaFYlGs~ey-E~~I~~~I~ 346 (511)
T TIGR03712 271 VDSKRQEFIYYFNP-GDFKPPLNVYFSGYRP-AEGFEGYFMMKR-LGAPFLLIGDPRLEGGAFYLGSDEY-EQGIINVIQ 346 (511)
T ss_pred ecCCCCeeEEecCC-cCCCCCeEEeeccCcc-cCcchhHHHHHh-cCCCeEEeeccccccceeeeCcHHH-HHHHHHHHH
Confidence 34444444433333 3445567888898776 4444332 233 444444 3455 1111 111 113445666
Q ss_pred HHHHHcCC--CCEEEEEeChhHHHHHHHHhc-Chh
Q psy6856 163 YILSVTRR--PTLSYIGHSMGTTMFYVMASM-RPE 194 (370)
Q Consensus 163 ~l~~~~~~--~~~~lvGhS~GG~va~~~a~~-~p~ 194 (370)
.-++.+|. +++++-|-|||+.=|+.+++. .|.
T Consensus 347 ~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~P~ 381 (511)
T TIGR03712 347 EKLDYLGFDHDQLILSGLSMGTFGALYYGAKLSPH 381 (511)
T ss_pred HHHHHhCCCHHHeeeccccccchhhhhhcccCCCc
Confidence 66777776 579999999999999999987 463
No 241
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=41.24 E-value=33 Score=27.13 Aligned_cols=31 Identities=23% Similarity=0.249 Sum_probs=27.3
Q ss_pred CHHHHHHHHHHHcCCCCEEEEEeChhHHHHH
Q psy6856 156 DVPAMIDYILSVTRRPTLSYIGHSMGTTMFY 186 (370)
Q Consensus 156 D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~ 186 (370)
+..+.+++....++.+.++++||+--|++..
T Consensus 44 ~~~~sl~~av~~l~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 44 DVLASLEYAVEVLGVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred cHHHHHHHHHHhhCCCEEEEEccCCCcHHHH
Confidence 6777899999999999999999998888764
No 242
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=41.22 E-value=9.9 Score=34.76 Aligned_cols=20 Identities=30% Similarity=0.501 Sum_probs=17.7
Q ss_pred CCCCCCcEEEEeeCCCcccC
Q psy6856 338 LSAITAPVALFYSNNDYLSH 357 (370)
Q Consensus 338 l~~I~~PvLli~G~~D~lv~ 357 (370)
+.++++|++++||++|...+
T Consensus 203 l~~~~~P~ll~~g~~D~~~~ 222 (274)
T TIGR03100 203 LERFQGPVLFILSGNDLTAQ 222 (274)
T ss_pred HHhcCCcEEEEEcCcchhHH
Confidence 66789999999999999874
No 243
>PRK10279 hypothetical protein; Provisional
Probab=36.88 E-value=54 Score=30.62 Aligned_cols=30 Identities=20% Similarity=0.038 Sum_probs=25.9
Q ss_pred HHHcCCCCEEEEEeChhHHHHHHHHhcChh
Q psy6856 165 LSVTRRPTLSYIGHSMGTTMFYVMASMRPE 194 (370)
Q Consensus 165 ~~~~~~~~~~lvGhS~GG~va~~~a~~~p~ 194 (370)
+++.|+..-.+.|-|+|+.++..+|+...+
T Consensus 27 L~E~gi~~d~i~GtS~GAlvga~yA~g~~~ 56 (300)
T PRK10279 27 LKKVGIEIDIVAGCSIGSLVGAAYACDRLS 56 (300)
T ss_pred HHHcCCCcCEEEEEcHHHHHHHHHHcCChH
Confidence 466788889999999999999999987654
No 244
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=36.52 E-value=41 Score=28.81 Aligned_cols=34 Identities=12% Similarity=0.187 Sum_probs=29.1
Q ss_pred CHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHH
Q psy6856 156 DVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMA 189 (370)
Q Consensus 156 D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a 189 (370)
+..+.+++.+..++.+.++++|||-=|++...+.
T Consensus 66 ~~~asleyAv~~L~v~~IvV~GHs~CGav~a~~~ 99 (182)
T cd00883 66 NCLSVLQYAVDVLKVKHIIVCGHYGCGGVKAALT 99 (182)
T ss_pred chhhhHHHHHHhcCCCEEEEecCCCchHHHHHHc
Confidence 4567899999999999999999999888866554
No 245
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=35.71 E-value=52 Score=33.46 Aligned_cols=27 Identities=11% Similarity=0.017 Sum_probs=23.2
Q ss_pred HHcCCCCEEEEEeChhHHHHHHHHhcC
Q psy6856 166 SVTRRPTLSYIGHSMGTTMFYVMASMR 192 (370)
Q Consensus 166 ~~~~~~~~~lvGhS~GG~va~~~a~~~ 192 (370)
+..|+++-.++|||+|=..|+..|.-.
T Consensus 260 ~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 260 DEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 568999999999999999998887643
No 246
>KOG2385|consensus
Probab=34.49 E-value=56 Score=32.74 Aligned_cols=23 Identities=13% Similarity=0.364 Sum_probs=20.4
Q ss_pred cCCCCEEEEEeChhHHHHHHHHh
Q psy6856 168 TRRPTLSYIGHSMGTTMFYVMAS 190 (370)
Q Consensus 168 ~~~~~~~lvGhS~GG~va~~~a~ 190 (370)
.|.+++.|||+|+|+.+.+.+..
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~ 466 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLL 466 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHH
Confidence 68899999999999999987655
No 247
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=34.04 E-value=37 Score=27.30 Aligned_cols=22 Identities=23% Similarity=0.324 Sum_probs=18.9
Q ss_pred CCCCCeEEEeCCCCCChhHhhh
Q psy6856 109 YANSPPVLLQHGLCLASDSWIL 130 (370)
Q Consensus 109 ~~~~~~vlllHG~~~~~~~w~~ 130 (370)
.+.+|.|+-+||..|...++..
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~ 70 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVS 70 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHH
Confidence 4678899999999999999844
No 248
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=33.87 E-value=33 Score=33.42 Aligned_cols=97 Identities=16% Similarity=0.219 Sum_probs=59.2
Q ss_pred CCCCCeEEEeCCCCCChhHhhhcccccc--CCcce-----ecCC---CCCCcccccC----CHHHHHHHHHHHcCCCCEE
Q psy6856 109 YANSPPVLLQHGLCLASDSWILRGQEDL--GNLYK-----LYPK---NVNWHEHGLY----DVPAMIDYILSVTRRPTLS 174 (370)
Q Consensus 109 ~~~~~~vlllHG~~~~~~~w~~~~~~~L--~~~~~-----~~~~---~~~~~~~~~~----D~~~~i~~l~~~~~~~~~~ 174 (370)
+-.+|+|+..-|...+..-++.-... | +|..+ +.+. ...|..+... |....+..+..-++ .+-+
T Consensus 60 ~~drPtV~~T~GY~~~~~p~r~Ept~-Lld~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~-~kWI 137 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNVSTSPRRSEPTQ-LLDGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYP-GKWI 137 (448)
T ss_pred CCCCCeEEEecCcccccCccccchhH-hhccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhcc-CCce
Confidence 45678999999988876533322222 3 44433 3322 3334444333 33334444433333 5888
Q ss_pred EEEeChhHHHHHHHHhcChhhhhccceeeccccce
Q psy6856 175 YIGHSMGTTMFYVMASMRPEYNRKINLQISLAPVA 209 (370)
Q Consensus 175 lvGhS~GG~va~~~a~~~p~~v~~l~~~~~~aP~~ 209 (370)
--|-|=||+.++.+=.-+|+-|+..|.. +||..
T Consensus 138 STG~SKGGmTa~y~rrFyP~DVD~tVaY--VAP~~ 170 (448)
T PF05576_consen 138 STGGSKGGMTAVYYRRFYPDDVDGTVAY--VAPND 170 (448)
T ss_pred ecCcCCCceeEEEEeeeCCCCCCeeeee--ecccc
Confidence 8999999999988877789988888764 45543
No 249
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=33.15 E-value=82 Score=29.47 Aligned_cols=30 Identities=23% Similarity=0.127 Sum_probs=25.3
Q ss_pred HHHHHcCCCCEEEEEeChhHHHHHHHHhcC
Q psy6856 163 YILSVTRRPTLSYIGHSMGTTMFYVMASMR 192 (370)
Q Consensus 163 ~l~~~~~~~~~~lvGhS~GG~va~~~a~~~ 192 (370)
..+++.|+..-.++|-|+|+.++..+|+..
T Consensus 35 ~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 35 KALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 345666888888999999999999999874
No 250
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=32.96 E-value=1e+02 Score=25.82 Aligned_cols=30 Identities=23% Similarity=0.091 Sum_probs=25.0
Q ss_pred HHHcCCCCEEEEEeChhHHHHHHHHhcChh
Q psy6856 165 LSVTRRPTLSYIGHSMGTTMFYVMASMRPE 194 (370)
Q Consensus 165 ~~~~~~~~~~lvGhS~GG~va~~~a~~~p~ 194 (370)
+.+.++..-.+.|-|.|+.++..+++..+.
T Consensus 20 L~e~gi~~d~v~GtSaGAi~aa~~a~g~~~ 49 (172)
T cd07198 20 LRERGPLIDIIAGTSAGAIVAALLASGRDL 49 (172)
T ss_pred HHHcCCCCCEEEEECHHHHHHHHHHcCCCH
Confidence 445588888999999999999999997543
No 251
>PRK15219 carbonic anhydrase; Provisional
Probab=32.07 E-value=59 Score=29.40 Aligned_cols=35 Identities=11% Similarity=0.227 Sum_probs=29.8
Q ss_pred CHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHh
Q psy6856 156 DVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMAS 190 (370)
Q Consensus 156 D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~ 190 (370)
|....+++.+..++.+.|+++|||-=|++...+..
T Consensus 128 ~~~~slEyAv~~L~v~~IvVlGHt~CGav~Aa~~~ 162 (245)
T PRK15219 128 DLLGSMEFACAVAGAKVVLVMGHTACGAVKGAIDN 162 (245)
T ss_pred chhhHHHHHHHHcCCCEEEEecCCcchHHHHHHhc
Confidence 56679999999999999999999998888665543
No 252
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=30.97 E-value=1.1e+02 Score=25.99 Aligned_cols=29 Identities=17% Similarity=0.030 Sum_probs=24.1
Q ss_pred HHHcCCCCEEEEEeChhHHHHHHHHhcCh
Q psy6856 165 LSVTRRPTLSYIGHSMGTTMFYVMASMRP 193 (370)
Q Consensus 165 ~~~~~~~~~~lvGhS~GG~va~~~a~~~p 193 (370)
+++.++..=.++|-|.|+.+|..+++...
T Consensus 21 L~e~~~~~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 21 LEEAGILKKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred HHHcCCCcceEEEECHHHHHHHHHHcCCC
Confidence 34557778899999999999999998653
No 253
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=29.97 E-value=60 Score=30.46 Aligned_cols=22 Identities=23% Similarity=0.131 Sum_probs=19.2
Q ss_pred CCCCEEEEEeChhHHHHHHHHh
Q psy6856 169 RRPTLSYIGHSMGTTMFYVMAS 190 (370)
Q Consensus 169 ~~~~~~lvGhS~GG~va~~~a~ 190 (370)
+.++.++.|||+|=..|+..+.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 5788999999999999888775
No 254
>PF03283 PAE: Pectinacetylesterase
Probab=28.20 E-value=93 Score=29.90 Aligned_cols=35 Identities=23% Similarity=0.168 Sum_probs=27.2
Q ss_pred CHHHHHHHHHHH-c-CCCCEEEEEeChhHHHHHHHHh
Q psy6856 156 DVPAMIDYILSV-T-RRPTLSYIGHSMGTTMFYVMAS 190 (370)
Q Consensus 156 D~~~~i~~l~~~-~-~~~~~~lvGhS~GG~va~~~a~ 190 (370)
.+.+.++++++. + ..++++|-|.|.||.-++..+-
T Consensus 139 i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d 175 (361)
T PF03283_consen 139 ILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHAD 175 (361)
T ss_pred HHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHH
Confidence 466778888777 4 3478999999999998887554
No 255
>PLN00416 carbonate dehydratase
Probab=28.13 E-value=70 Score=29.18 Aligned_cols=34 Identities=24% Similarity=0.299 Sum_probs=29.1
Q ss_pred CHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHH
Q psy6856 156 DVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMA 189 (370)
Q Consensus 156 D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a 189 (370)
+..+.|++.+..++.+.|+|+|||-=|++...+.
T Consensus 125 ~~~asLEyAv~~L~V~~IVV~GHs~CGaV~Aa~~ 158 (258)
T PLN00416 125 GVGAAVEYAVVHLKVENILVIGHSCCGGIKGLMS 158 (258)
T ss_pred cchhHHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 4567899999999999999999999888866554
No 256
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=27.82 E-value=1.3e+02 Score=26.49 Aligned_cols=28 Identities=18% Similarity=-0.034 Sum_probs=23.4
Q ss_pred HHcCCCCEEEEEeChhHHHHHHHHhcCh
Q psy6856 166 SVTRRPTLSYIGHSMGTTMFYVMASMRP 193 (370)
Q Consensus 166 ~~~~~~~~~lvGhS~GG~va~~~a~~~p 193 (370)
++.+++.-.++|-|.|+.+|..+|+..+
T Consensus 23 ~e~gi~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 23 LEMGLEPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HHcCCCceEEEEeCHHHHHHHHHHcCCC
Confidence 4457777889999999999999998653
No 257
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=27.34 E-value=70 Score=27.67 Aligned_cols=34 Identities=21% Similarity=0.303 Sum_probs=29.0
Q ss_pred CHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHH
Q psy6856 156 DVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMA 189 (370)
Q Consensus 156 D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a 189 (370)
...+.+++.+..++.+.++++|||-=|++...+.
T Consensus 72 ~~~asleyav~~l~v~~ivV~GH~~Cgav~Aa~~ 105 (190)
T cd00884 72 GTSAAIEYAVAVLKVEHIVVCGHSDCGGIRALLS 105 (190)
T ss_pred chhhhHHHHHHHhCCCEEEEeCCCcchHHHHHhc
Confidence 3567899999999999999999999888866554
No 258
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=27.08 E-value=1e+02 Score=28.88 Aligned_cols=32 Identities=19% Similarity=0.119 Sum_probs=22.4
Q ss_pred HHHHHHHcCCC----CEEEEEeChhHHHHHHHHhcC
Q psy6856 161 IDYILSVTRRP----TLSYIGHSMGTTMFYVMASMR 192 (370)
Q Consensus 161 i~~l~~~~~~~----~~~lvGhS~GG~va~~~a~~~ 192 (370)
++.+-+.+|.. -=.+.|-|+||.+|..+|...
T Consensus 18 L~~le~~~g~~i~~~fD~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 18 LIAIEKALGRPIRELFDWIAGTSTGGILALALLHGK 53 (312)
T ss_pred HHHHHHHhCCCchhhccEEEeeChHHHHHHHHHcCC
Confidence 44443435642 235899999999999999865
No 259
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=27.01 E-value=93 Score=30.62 Aligned_cols=38 Identities=11% Similarity=0.078 Sum_probs=28.0
Q ss_pred HHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhcc
Q psy6856 161 IDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKI 199 (370)
Q Consensus 161 i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l 199 (370)
++.+ .+.|+.+=++.|-|.|+.+|..+++..++.+..+
T Consensus 92 LkaL-~E~gl~p~vIsGTSaGAivAal~as~~~eel~~~ 129 (421)
T cd07230 92 LKAL-FEANLLPRIISGSSAGSIVAAILCTHTDEEIPEL 129 (421)
T ss_pred HHHH-HHcCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 3443 3346666789999999999999999877654443
No 260
>PRK10437 carbonic anhydrase; Provisional
Probab=26.92 E-value=75 Score=28.20 Aligned_cols=34 Identities=12% Similarity=0.162 Sum_probs=29.0
Q ss_pred CHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHH
Q psy6856 156 DVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMA 189 (370)
Q Consensus 156 D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a 189 (370)
+..+.+++.+..++.+.|+++||+-=|++...+.
T Consensus 76 ~~~~~leyAV~~L~v~~IvV~GHt~CG~V~Aal~ 109 (220)
T PRK10437 76 NCLSVVQYAVDVLEVEHIIICGHYGCGGVQAAVE 109 (220)
T ss_pred chHHHHHHHHHHcCCCEEEEeCCCCchHHHHHHc
Confidence 4567889999999999999999999888876654
No 261
>PLN03006 carbonate dehydratase
Probab=26.66 E-value=67 Score=29.93 Aligned_cols=33 Identities=18% Similarity=0.290 Sum_probs=28.2
Q ss_pred CHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHH
Q psy6856 156 DVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVM 188 (370)
Q Consensus 156 D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~ 188 (370)
...+.|++.+..++.+.|+|+|||-=|++...+
T Consensus 157 ~~~aSLEYAV~~L~V~~IVV~GHs~CGaV~Aal 189 (301)
T PLN03006 157 ETKAALEFSVNTLNVENILVIGHSRCGGIQALM 189 (301)
T ss_pred chhhhHHHHHHHhCCCEEEEecCCCchHHHHHh
Confidence 356799999999999999999999988876544
No 262
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=26.42 E-value=1.3e+02 Score=26.24 Aligned_cols=29 Identities=21% Similarity=0.124 Sum_probs=24.6
Q ss_pred HHHcCCCCEEEEEeChhHHHHHHHHhcCh
Q psy6856 165 LSVTRRPTLSYIGHSMGTTMFYVMASMRP 193 (370)
Q Consensus 165 ~~~~~~~~~~lvGhS~GG~va~~~a~~~p 193 (370)
+.+.+...-.+.|-|.|+.+|..+|+..+
T Consensus 20 L~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 20 LAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 34557777889999999999999999875
No 263
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=25.96 E-value=49 Score=30.07 Aligned_cols=25 Identities=24% Similarity=0.175 Sum_probs=17.8
Q ss_pred CCCCCCcEEEEeeCCCcccCHHhHH
Q psy6856 338 LSAITAPVALFYSNNDYLSHPACNQ 362 (370)
Q Consensus 338 l~~I~~PvLli~G~~D~lv~~~~~~ 362 (370)
+.+|++|+|++.|-.|........+
T Consensus 224 ~~~i~vP~l~v~Gw~D~~~~~~~~~ 248 (272)
T PF02129_consen 224 LDKIDVPVLIVGGWYDTLFLRGALR 248 (272)
T ss_dssp HGG--SEEEEEEETTCSSTSHHHHH
T ss_pred HhhCCCCEEEecccCCcccchHHHH
Confidence 5789999999999999666644333
No 264
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=25.78 E-value=36 Score=30.86 Aligned_cols=15 Identities=27% Similarity=0.450 Sum_probs=13.0
Q ss_pred CCCCEEEEEeChhHH
Q psy6856 169 RRPTLSYIGHSMGTT 183 (370)
Q Consensus 169 ~~~~~~lvGhS~GG~ 183 (370)
....|+++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 558999999999975
No 265
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=25.69 E-value=1e+02 Score=30.17 Aligned_cols=39 Identities=13% Similarity=0.123 Sum_probs=29.0
Q ss_pred HHHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhcc
Q psy6856 160 MIDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKI 199 (370)
Q Consensus 160 ~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l 199 (370)
+++.+. +.|+.+=++.|-|.|+.+|..+|...++...++
T Consensus 85 VlkaL~-e~gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 85 VVKALL-DADLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHHH-hCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 344443 346777789999999999999999777655444
No 266
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=24.61 E-value=1.1e+02 Score=28.56 Aligned_cols=30 Identities=20% Similarity=0.097 Sum_probs=25.9
Q ss_pred HHHHHcCCCCEEEEEeChhHHHHHHHHhcC
Q psy6856 163 YILSVTRRPTLSYIGHSMGTTMFYVMASMR 192 (370)
Q Consensus 163 ~l~~~~~~~~~~lvGhS~GG~va~~~a~~~ 192 (370)
..+++.|++.-.+.|-|+|+.++..+|+..
T Consensus 31 ~aL~e~gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 31 KALEEAGIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHcCCCccEEEecCHHHHHHHHHHcCC
Confidence 345777899999999999999999999864
No 267
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.60 E-value=92 Score=26.28 Aligned_cols=65 Identities=14% Similarity=0.064 Sum_probs=40.4
Q ss_pred CeEEEeCCCCCChhHhhhccccccCCcce--ecCCCCCCccccc-CCHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHH
Q psy6856 113 PPVLLQHGLCLASDSWILRGQEDLGNLYK--LYPKNVNWHEHGL-YDVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMA 189 (370)
Q Consensus 113 ~~vlllHG~~~~~~~w~~~~~~~L~~~~~--~~~~~~~~~~~~~-~D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a 189 (370)
..+|++-|++.......... +..+|. +.+| +++... .|..+ .+.+.+|.+|||-.+|-++.
T Consensus 12 ~LIvyFaGwgtpps~v~HLi---lpeN~dl~lcYD---Y~dl~ldfDfsA----------y~hirlvAwSMGVwvAeR~l 75 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLI---LPENHDLLLCYD---YQDLNLDFDFSA----------YRHIRLVAWSMGVWVAERVL 75 (214)
T ss_pred EEEEEEecCCCCHHHHhhcc---CCCCCcEEEEee---hhhcCcccchhh----------hhhhhhhhhhHHHHHHHHHH
Confidence 37888899999988876655 234554 3222 111111 01111 25688999999999998887
Q ss_pred hcCh
Q psy6856 190 SMRP 193 (370)
Q Consensus 190 ~~~p 193 (370)
...+
T Consensus 76 qg~~ 79 (214)
T COG2830 76 QGIR 79 (214)
T ss_pred hhcc
Confidence 6554
No 268
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=23.90 E-value=1.2e+02 Score=27.87 Aligned_cols=29 Identities=21% Similarity=0.095 Sum_probs=24.8
Q ss_pred HHHHcCCCCEEEEEeChhHHHHHHHHhcC
Q psy6856 164 ILSVTRRPTLSYIGHSMGTTMFYVMASMR 192 (370)
Q Consensus 164 l~~~~~~~~~~lvGhS~GG~va~~~a~~~ 192 (370)
.+++.|+.-=.+.|-|+|+.++..+|+..
T Consensus 31 aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 31 ALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 34667888888999999999999999873
No 269
>PLN02154 carbonic anhydrase
Probab=23.87 E-value=92 Score=28.87 Aligned_cols=34 Identities=12% Similarity=0.291 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHH
Q psy6856 156 DVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMA 189 (370)
Q Consensus 156 D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a 189 (370)
...+.+++.+..++.+.|+++|||-=|++...+.
T Consensus 151 ~~~aslEyAv~~L~v~~IvV~GHs~CGAV~Aal~ 184 (290)
T PLN02154 151 ETNSALEFAVTTLQVENIIVMGHSNCGGIAALMS 184 (290)
T ss_pred chhhHHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 4677899999999999999999999888876654
No 270
>PLN03019 carbonic anhydrase
Probab=23.75 E-value=77 Score=29.90 Aligned_cols=34 Identities=26% Similarity=0.309 Sum_probs=28.8
Q ss_pred CHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHH
Q psy6856 156 DVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMA 189 (370)
Q Consensus 156 D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a 189 (370)
+..+.|++.+..++.+.|+|+|||-=|++...+.
T Consensus 200 ~v~aSIEYAV~~L~V~~IVV~GHs~CGaVkAal~ 233 (330)
T PLN03019 200 GVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMS 233 (330)
T ss_pred ccchhHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 4567899999999999999999999888866554
No 271
>PLN03014 carbonic anhydrase
Probab=23.65 E-value=79 Score=30.06 Aligned_cols=34 Identities=26% Similarity=0.309 Sum_probs=28.9
Q ss_pred CHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHH
Q psy6856 156 DVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMA 189 (370)
Q Consensus 156 D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a 189 (370)
+..+.+++.+..++.+.|+|+|||-=|++...+.
T Consensus 205 ~v~asLEYAV~~L~V~~IVV~GHs~CGaV~Aa~~ 238 (347)
T PLN03014 205 GVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMS 238 (347)
T ss_pred cchhHHHHHHHHhCCCEEEEeCCCCchHHHHHHh
Confidence 4667999999999999999999999888766543
No 272
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=22.93 E-value=2.1e+02 Score=24.00 Aligned_cols=33 Identities=12% Similarity=0.036 Sum_probs=25.7
Q ss_pred HHHHHHHcCCCCEEEEEeChhHHHHHHHHhcChh
Q psy6856 161 IDYILSVTRRPTLSYIGHSMGTTMFYVMASMRPE 194 (370)
Q Consensus 161 i~~l~~~~~~~~~~lvGhS~GG~va~~~a~~~p~ 194 (370)
++.+ ++.+...=.+.|-|.|+.+|..++.....
T Consensus 19 l~~L-~e~g~~~d~i~GtSaGAi~aa~~a~g~~~ 51 (175)
T cd07228 19 LRAL-EEEGIEIDIIAGSSIGALVGALYAAGHLD 51 (175)
T ss_pred HHHH-HHCCCCeeEEEEeCHHHHHHHHHHcCCCH
Confidence 3444 45577777899999999999999987643
No 273
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=22.43 E-value=1.4e+02 Score=28.10 Aligned_cols=31 Identities=16% Similarity=0.113 Sum_probs=24.4
Q ss_pred HHcCCCCEEEEEeChhHHHHHHHHhcChhhh
Q psy6856 166 SVTRRPTLSYIGHSMGTTMFYVMASMRPEYN 196 (370)
Q Consensus 166 ~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v 196 (370)
.+.|+.+-++.|-|.|+.+|..++...++..
T Consensus 91 ~e~gl~p~~i~GsSaGAivaa~~~~~t~~El 121 (323)
T cd07231 91 VEHQLLPRVIAGSSVGSIVCAIIATRTDEEL 121 (323)
T ss_pred HHcCCCCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 3447777789999999999999998655433
No 274
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=21.74 E-value=1.2e+02 Score=27.31 Aligned_cols=61 Identities=23% Similarity=0.165 Sum_probs=33.5
Q ss_pred CCCCeEEEeCCCCCChhHhhhccccccCCcceecCCCCCCcccccCCHHHHHHHHHHHcCCCCEEEEEeC
Q psy6856 110 ANSPPVLLQHGLCLASDSWILRGQEDLGNLYKLYPKNVNWHEHGLYDVPAMIDYILSVTRRPTLSYIGHS 179 (370)
Q Consensus 110 ~~~~~vlllHG~~~~~~~w~~~~~~~L~~~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~lvGhS 179 (370)
+..+-|++-|++.....+.....- ++.+ ...-.+.+..|++++|+.+.. -...+++++||-
T Consensus 145 ~~~~~VliaH~~~~G~g~~~~~~c---g~d~-----~~~~~~~G~~~l~~ai~~~~~-~~~~~l~~fGH~ 205 (238)
T cd07397 145 PDLPLILLAHNGPSGLGSDAEDPC---GRDW-----KPPGGDWGDPDLALAISQIQQ-GRQVPLVVFGHM 205 (238)
T ss_pred CCCCeEEEeCcCCcCCCccccccc---cccc-----CCcCCCCCCHHHHHHHHHHhc-cCCCCEEEeCCc
Confidence 344567888887655543211110 1101 111234566688889887752 122489999995
No 275
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=21.57 E-value=1.3e+02 Score=27.65 Aligned_cols=36 Identities=14% Similarity=0.166 Sum_probs=26.7
Q ss_pred CHHHHHHHHHHHc-CCCCEEEEEeChhHHHHHHHHhc
Q psy6856 156 DVPAMIDYILSVT-RRPTLSYIGHSMGTTMFYVMASM 191 (370)
Q Consensus 156 D~~~~i~~l~~~~-~~~~~~lvGhS~GG~va~~~a~~ 191 (370)
.+..+...+++.. ..++++++|.|-|+..|-.+|..
T Consensus 76 ~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 76 RIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 3444566665664 34689999999999999988854
No 276
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=21.57 E-value=1.3e+02 Score=24.53 Aligned_cols=34 Identities=12% Similarity=0.117 Sum_probs=26.7
Q ss_pred CHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHH
Q psy6856 156 DVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMA 189 (370)
Q Consensus 156 D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a 189 (370)
+..+.+++....++.+.++++||+-=|++...+.
T Consensus 40 ~~~~sle~av~~l~v~~IiV~gHt~CGa~~~~~~ 73 (153)
T PF00484_consen 40 SALASLEYAVYHLGVKEIIVCGHTDCGAIKAALD 73 (153)
T ss_dssp HHHHHHHHHHHTST-SEEEEEEETT-HHHHHHHH
T ss_pred chhhheeeeeecCCCCEEEEEcCCCchHHHHHHh
Confidence 5567888889999999999999999998875544
No 277
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=21.49 E-value=86 Score=27.53 Aligned_cols=35 Identities=14% Similarity=0.164 Sum_probs=29.6
Q ss_pred CHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHh
Q psy6856 156 DVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMAS 190 (370)
Q Consensus 156 D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~ 190 (370)
+.-+.+++..+.++.+.|+++||+-=|++...+..
T Consensus 77 ~~l~sleyAv~~L~v~~IiV~GH~~CGav~aa~~~ 111 (207)
T COG0288 77 SVLRSLEYAVYVLGVKEIIVCGHTDCGAVKAALDD 111 (207)
T ss_pred chhHHHHHHHHHcCCCEEEEecCCCcHHHHhcccc
Confidence 55678999999999999999999999988665543
No 278
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=21.35 E-value=1.2e+02 Score=23.19 Aligned_cols=41 Identities=22% Similarity=0.159 Sum_probs=30.6
Q ss_pred HHHHHHHHHcCCCCEEEEEeChhHH--HHHHHHhcChhhhhcc
Q psy6856 159 AMIDYILSVTRRPTLSYIGHSMGTT--MFYVMASMRPEYNRKI 199 (370)
Q Consensus 159 ~~i~~l~~~~~~~~~~lvGhS~GG~--va~~~a~~~p~~v~~l 199 (370)
+.++.+++.....++++||=|--.= +-..+|.++|+++..+
T Consensus 53 ~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai 95 (100)
T PF09949_consen 53 DNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGRILAI 95 (100)
T ss_pred HHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEE
Confidence 4788889999999999999885543 3335677889766544
No 279
>PF07643 DUF1598: Protein of unknown function (DUF1598); InterPro: IPR011487 This is a family of Rhodopirellula baltica hypothetical proteins of about 500 amino acids in length.
Probab=21.30 E-value=1.9e+02 Score=21.39 Aligned_cols=35 Identities=11% Similarity=0.118 Sum_probs=30.5
Q ss_pred CHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHh
Q psy6856 156 DVPAMIDYILSVTRRPTLSYIGHSMGTTMFYVMAS 190 (370)
Q Consensus 156 D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~~~a~ 190 (370)
+..++++.+.+.+|.+.|.+.|-+....+|..+..
T Consensus 28 ~~~~~~~~l~~~LG~QdV~V~Gip~~sh~ArvLVe 62 (84)
T PF07643_consen 28 GPAAWVDGLRQALGPQDVTVYGIPADSHFARVLVE 62 (84)
T ss_pred CHHHHHHHHHHHhCCceeEEEccCCccHHHHHHHH
Confidence 56668888999999999999999999999987653
No 280
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=20.77 E-value=1.5e+02 Score=28.80 Aligned_cols=35 Identities=11% Similarity=0.025 Sum_probs=27.7
Q ss_pred HHHcCCCCEEEEEeChhHHHHHHHHhcChhhhhcc
Q psy6856 165 LSVTRRPTLSYIGHSMGTTMFYVMASMRPEYNRKI 199 (370)
Q Consensus 165 ~~~~~~~~~~lvGhS~GG~va~~~a~~~p~~v~~l 199 (370)
+.+.|+.+=++.|-|.|+.+|..+|...++....+
T Consensus 105 L~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~ 139 (391)
T cd07229 105 LWLRGLLPRIITGTATGALIAALVGVHTDEELLRF 139 (391)
T ss_pred HHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHH
Confidence 45567888889999999999999999766554444
No 281
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=20.73 E-value=1.1e+02 Score=24.95 Aligned_cols=31 Identities=10% Similarity=0.050 Sum_probs=25.5
Q ss_pred CHHHHHHHHHHHcCCCCEEEEEeChhHHHHH
Q psy6856 156 DVPAMIDYILSVTRRPTLSYIGHSMGTTMFY 186 (370)
Q Consensus 156 D~~~~i~~l~~~~~~~~~~lvGhS~GG~va~ 186 (370)
|....+++....++.+.++++||+-=|++..
T Consensus 41 ~~~~sl~~av~~l~~~~IiV~gHt~Cg~~~a 71 (142)
T cd03379 41 DAIRSLVVSVYLLGTREIIVIHHTDCGMLTF 71 (142)
T ss_pred hHHHHHHHHHHHhCCCEEEEEeecCCcceEe
Confidence 5566788888999999999999997777654
No 282
>KOG4388|consensus
Probab=20.50 E-value=31 Score=35.04 Aligned_cols=21 Identities=19% Similarity=0.352 Sum_probs=16.9
Q ss_pred CCEEEEEeChhHHHHHHHHhc
Q psy6856 171 PTLSYIGHSMGTTMFYVMASM 191 (370)
Q Consensus 171 ~~~~lvGhS~GG~va~~~a~~ 191 (370)
++|+++|-|.||.+.+..|.+
T Consensus 469 Eriv~aGDSAGgNL~~~VaLr 489 (880)
T KOG4388|consen 469 ERIVLAGDSAGGNLCFTVALR 489 (880)
T ss_pred ceEEEeccCCCcceeehhHHH
Confidence 799999999999876655543
Done!