Query psy6858
Match_columns 592
No_of_seqs 281 out of 2145
Neff 8.2
Searched_HMMs 29240
Date Fri Aug 16 20:11:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6858.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6858hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vr2_A Dihydropyrimidinase; hy 100.0 1.1E-77 3.9E-82 666.7 41.9 503 17-542 25-532 (541)
2 3dc8_A Dihydropyrimidinase; TI 100.0 1.5E-76 5E-81 648.9 41.1 483 19-517 1-484 (490)
3 2ftw_A Dihydropyrimidine amido 100.0 1.3E-75 4.4E-80 647.5 42.5 489 17-518 6-497 (521)
4 3sfw_A Dihydropyrimidinase; hy 100.0 6.9E-67 2.4E-71 569.3 45.7 457 19-483 1-458 (461)
5 2fty_A Dihydropyrimidinase; al 100.0 1.2E-65 4.3E-70 570.8 43.7 454 18-482 2-521 (559)
6 2vm8_A Dihydropyrimidinase-rel 100.0 2.9E-65 9.9E-70 562.2 39.9 475 18-498 25-500 (501)
7 1gkp_A Hydantoinase; hydrolase 100.0 3.8E-63 1.3E-67 538.3 44.6 455 20-483 1-456 (458)
8 3e74_A Allantoinase; (beta/alp 100.0 1.6E-62 5.4E-67 536.1 38.5 441 18-481 22-471 (473)
9 1nfg_A D-hydantoinase; TIM bar 100.0 1.8E-59 6.2E-64 509.5 41.4 454 19-484 1-456 (457)
10 3hm7_A Allantoinase; metallo-d 100.0 3.5E-59 1.2E-63 506.7 36.3 431 18-467 5-441 (448)
11 3gri_A Dihydroorotase, dhoase; 100.0 3.8E-58 1.3E-62 495.1 31.2 422 21-467 2-424 (424)
12 1gkr_A Hydantoinase, non-ATP d 100.0 1.6E-56 5.5E-61 486.0 38.2 450 19-484 2-455 (458)
13 3mpg_A Dihydroorotase, dhoase; 100.0 1.7E-56 6E-61 482.6 28.9 426 19-470 1-428 (428)
14 2gwn_A Dihydroorotase; zinc-bi 100.0 6.6E-54 2.3E-58 465.8 30.3 437 18-480 3-450 (452)
15 2z00_A Dihydroorotase; zinc bi 100.0 2.2E-49 7.6E-54 425.8 29.0 417 21-467 2-426 (426)
16 1xrt_A Dihydroorotase, dhoase; 100.0 7.4E-48 2.5E-52 419.9 34.5 420 17-465 45-467 (467)
17 3gip_A N-acyl-D-glutamate deac 100.0 3.8E-42 1.3E-46 376.1 34.6 394 18-481 6-479 (480)
18 3pnu_A Dihydroorotase; TIM bar 100.0 4.8E-44 1.6E-48 373.7 17.5 325 65-453 22-358 (359)
19 2z26_A Dihydroorotase, dhoase; 100.0 2.5E-40 8.5E-45 346.5 18.3 332 65-453 4-346 (347)
20 1rk6_A D-aminoacylase; TIM bar 100.0 2E-38 6.7E-43 348.1 29.7 396 18-482 20-495 (496)
21 3h4u_A Amidohydrolase; signatu 100.0 3.2E-36 1.1E-40 328.6 35.0 381 15-471 25-458 (479)
22 2ics_A Adenine deaminase; TIM 100.0 1.3E-37 4.3E-42 328.9 22.1 357 17-468 3-375 (379)
23 3ls9_A Triazine hydrolase; atr 100.0 8E-36 2.7E-40 323.1 34.3 377 21-472 2-440 (456)
24 3lnp_A Amidohydrolase family p 100.0 1.6E-35 5.3E-40 322.3 35.5 375 17-471 21-447 (468)
25 4f0r_A 5-methylthioadenosine/S 100.0 1.3E-36 4.4E-41 328.8 26.7 374 18-472 5-421 (447)
26 2paj_A Putative cytosine/guani 100.0 1.3E-35 4.3E-40 325.1 33.2 378 18-471 9-462 (492)
27 4dzh_A Amidohydrolase; adenosi 100.0 5.8E-36 2E-40 326.4 30.3 373 18-471 13-429 (472)
28 4dyk_A Amidohydrolase; adenosi 100.0 1.1E-35 3.7E-40 321.9 31.6 375 18-472 7-423 (451)
29 2qt3_A N-isopropylammelide iso 100.0 3E-35 1E-39 313.4 33.3 356 15-469 1-402 (403)
30 3feq_A Putative amidohydrolase 100.0 6.2E-36 2.1E-40 320.6 23.6 354 18-469 3-415 (423)
31 2r8c_A Putative amidohydrolase 100.0 2.2E-35 7.7E-40 317.3 26.3 356 18-469 3-418 (426)
32 2ogj_A Dihydroorotase; TIM bar 100.0 8.2E-36 2.8E-40 319.9 19.9 367 18-480 14-402 (417)
33 3gnh_A L-lysine, L-arginine ca 100.0 2.8E-34 9.7E-39 305.7 31.5 351 20-464 3-402 (403)
34 1ra0_A Cytosine deaminase; alp 100.0 4.8E-35 1.6E-39 315.1 22.5 368 15-469 4-415 (430)
35 2ood_A BLR3880 protein; PSI-II 100.0 2.1E-34 7E-39 314.5 26.7 379 20-467 4-468 (475)
36 2i9u_A Cytosine/guanine deamin 100.0 4.9E-34 1.7E-38 308.0 27.8 374 18-467 8-431 (439)
37 3hpa_A Amidohydrolase; signatu 100.0 7.4E-33 2.5E-37 299.4 36.6 383 17-472 27-459 (479)
38 1p1m_A Hypothetical protein TM 100.0 1E-34 3.5E-39 310.0 20.9 348 21-470 1-386 (406)
39 3be7_A Zn-dependent arginine c 100.0 2.6E-33 9E-38 299.0 30.1 351 18-467 5-403 (408)
40 2p9b_A Possible prolidase; pro 100.0 2.7E-33 9.3E-38 303.9 28.4 363 18-469 12-439 (458)
41 4gy7_A Urease; JACK bean, hydr 100.0 5.8E-35 2E-39 334.0 15.7 369 18-465 336-730 (840)
42 1onw_A Isoaspartyl dipeptidase 100.0 1.3E-33 4.5E-38 299.9 24.8 352 18-470 7-383 (390)
43 1e9y_B Urease subunit beta; hy 100.0 8.8E-34 3E-38 314.0 22.1 357 18-468 65-463 (569)
44 2qs8_A XAA-Pro dipeptidase; am 100.0 3.2E-32 1.1E-36 291.8 29.6 352 18-465 6-413 (418)
45 2vun_A Enamidase; nicotinate d 100.0 1.5E-32 5E-37 291.1 26.5 356 18-470 1-377 (386)
46 2vhl_A N-acetylglucosamine-6-p 100.0 2.5E-32 8.6E-37 290.6 27.1 351 19-469 3-394 (396)
47 4ep8_C Urease subunit alpha; a 100.0 9E-36 3.1E-40 332.2 -0.5 376 17-464 63-455 (566)
48 4aql_A Guanine deaminase; hydr 100.0 8.2E-32 2.8E-36 293.9 29.6 381 18-467 30-474 (476)
49 3iv8_A N-acetylglucosamine-6-p 100.0 1.5E-32 5.3E-37 288.5 22.2 357 21-464 5-381 (381)
50 4ac7_C Urease subunit alpha; h 100.0 3.3E-33 1.1E-37 305.5 16.8 358 18-465 66-460 (570)
51 4ubp_C Protein (urease (chain 100.0 3.3E-33 1.1E-37 305.5 15.7 358 18-465 66-460 (570)
52 2q09_A Imidazolonepropionase; 100.0 7.7E-32 2.6E-36 288.8 26.0 352 16-467 2-410 (416)
53 2bb0_A Imidazolonepropionase; 100.0 2.6E-31 9E-36 285.0 28.1 351 17-469 3-420 (421)
54 3nqb_A Adenine deaminase 2; PS 100.0 1.5E-30 5E-35 290.8 29.7 333 17-470 33-379 (608)
55 3ooq_A Amidohydrolase; structu 100.0 5.2E-30 1.8E-34 273.0 31.5 347 15-466 1-389 (396)
56 2puz_A Imidazolonepropionase; 100.0 3.2E-30 1.1E-34 276.2 27.8 345 18-463 14-418 (419)
57 3v7p_A Amidohydrolase family p 100.0 1.2E-30 4.2E-35 280.8 23.5 372 21-472 2-412 (427)
58 4f0l_A Amidohydrolase; ssgcid, 100.0 1.2E-30 4E-35 283.2 23.4 365 18-469 11-440 (458)
59 1yrr_A N-acetylglucosamine-6-p 100.0 5.1E-30 1.7E-34 271.6 20.5 347 21-465 2-382 (382)
60 3mdu_A N-formimino-L-glutamate 100.0 6.4E-30 2.2E-34 277.3 21.5 363 20-469 2-435 (453)
61 2imr_A Hypothetical protein DR 100.0 4.9E-30 1.7E-34 275.3 20.4 338 17-424 35-417 (420)
62 3mtw_A L-arginine carboxypepti 100.0 2.3E-28 7.7E-33 253.7 27.6 355 20-463 3-401 (403)
63 3mkv_A Putative amidohydrolase 100.0 1.3E-27 4.6E-32 248.9 20.6 66 18-83 3-71 (426)
64 1o12_A N-acetylglucosamine-6-p 99.9 3.7E-27 1.3E-31 249.4 17.6 323 33-466 26-376 (376)
65 3icj_A Uncharacterized metal-d 99.9 7.1E-27 2.4E-31 257.2 17.7 327 19-426 36-502 (534)
66 3ggm_A Uncharacterized protein 99.5 3.9E-14 1.3E-18 115.3 8.6 68 18-85 3-75 (81)
67 1bf6_A Phosphotriesterase homo 99.1 2.2E-09 7.5E-14 108.3 16.5 255 72-402 6-291 (291)
68 2ob3_A Parathion hydrolase; me 98.9 3.7E-08 1.3E-12 101.6 18.5 128 72-204 16-169 (330)
69 2vc7_A Aryldialkylphosphatase; 98.8 7.2E-08 2.5E-12 98.4 14.2 129 72-204 17-172 (314)
70 1zzm_A Putative deoxyribonucle 98.7 1.5E-06 5E-11 86.1 22.6 125 73-205 5-136 (259)
71 3rcm_A TATD family hydrolase; 98.6 1.5E-06 5E-11 87.6 19.8 127 73-205 3-136 (287)
72 3ovg_A Amidohydrolase; structu 98.5 3.7E-06 1.3E-10 87.3 19.5 278 72-419 21-345 (363)
73 1xwy_A DNAse TATD, deoxyribonu 98.5 8.7E-06 3E-10 80.7 21.2 125 73-205 5-134 (264)
74 2y1h_A Putative deoxyribonucle 98.5 2.4E-05 8.2E-10 77.8 24.3 127 72-205 5-148 (272)
75 4i6k_A Amidohydrolase family p 98.3 1.6E-05 5.4E-10 80.3 16.8 129 69-205 23-159 (294)
76 3pnz_A Phosphotriesterase fami 98.2 4.6E-06 1.6E-10 85.5 11.0 258 72-403 17-328 (330)
77 3rhg_A Putative phophotriester 98.2 5.4E-05 1.8E-09 78.7 18.8 241 95-404 79-345 (365)
78 2gzx_A Putative TATD related D 98.2 4.3E-05 1.5E-09 75.4 17.3 125 73-205 2-131 (265)
79 3k2g_A Resiniferatoxin-binding 98.2 7.5E-05 2.6E-09 77.6 19.0 243 95-405 90-356 (364)
80 1yix_A Deoxyribonuclease YCFH; 98.2 5.5E-05 1.9E-09 74.7 16.9 125 73-205 3-133 (265)
81 3ipw_A Hydrolase TATD family p 98.1 0.00023 7.8E-09 72.6 20.7 132 72-205 27-177 (325)
82 3gg7_A Uncharacterized metallo 98.0 7.1E-06 2.4E-10 80.9 7.6 119 73-205 3-127 (254)
83 3gtx_A Organophosphorus hydrol 98.0 4.3E-05 1.5E-09 78.6 13.1 259 72-402 32-339 (339)
84 2xio_A Putative deoxyribonucle 98.0 4.2E-05 1.4E-09 77.5 11.8 130 72-205 2-149 (301)
85 2ffi_A 2-pyrone-4,6-dicarboxyl 97.9 4.9E-05 1.7E-09 76.1 12.0 126 72-205 13-146 (288)
86 1j6o_A TATD-related deoxyribon 97.9 0.00022 7.7E-09 70.7 15.6 125 73-205 13-142 (268)
87 2dvt_A Thermophilic reversible 97.9 0.00041 1.4E-08 70.6 17.6 55 151-205 108-167 (327)
88 3tn4_A Phosphotriesterase; lac 97.8 0.001 3.5E-08 68.7 18.7 131 72-206 52-216 (360)
89 3cjp_A Predicted amidohydrolas 97.7 0.00056 1.9E-08 67.8 14.5 52 150-205 101-153 (272)
90 2f6k_A Metal-dependent hydrola 97.5 0.0021 7.3E-08 64.5 16.3 55 150-205 103-157 (307)
91 4d9a_A 2-pyrone-4,6-dicarbaxyl 97.4 0.0029 1E-07 63.9 15.7 75 153-261 109-183 (303)
92 2pgf_A Adenosine deaminase; me 97.2 0.0011 3.8E-08 69.0 10.2 144 182-404 214-359 (371)
93 3rys_A Adenosine deaminase 1; 97.2 0.015 5E-07 59.7 18.0 157 163-403 163-320 (343)
94 3ij6_A Uncharacterized metal-d 97.0 0.0079 2.7E-07 61.0 14.3 54 151-205 111-164 (312)
95 3pao_A Adenosine deaminase; st 97.0 0.0049 1.7E-07 62.8 12.0 39 164-205 161-199 (326)
96 3guw_A Uncharacterized protein 96.9 0.0022 7.6E-08 63.3 8.3 118 73-205 2-132 (261)
97 4do7_A Amidohydrolase 2; enzym 96.7 0.008 2.7E-07 60.5 11.2 53 152-205 90-144 (303)
98 3e2v_A 3'-5'-exonuclease; stru 96.6 0.042 1.4E-06 57.2 15.7 134 71-206 12-206 (401)
99 3iar_A Adenosine deaminase; pu 96.4 0.078 2.7E-06 54.8 16.2 23 183-205 192-214 (367)
100 3irs_A Uncharacterized protein 96.2 0.067 2.3E-06 53.4 14.6 226 97-408 53-285 (291)
101 2wm1_A 2-amino-3-carboxymucona 94.6 0.11 3.6E-06 52.8 9.4 54 151-205 124-177 (336)
102 2hbv_A 2-amino-3-carboxymucona 93.7 0.21 7.2E-06 50.6 9.5 54 150-205 127-180 (334)
103 3nur_A Amidohydrolase; TIM bar 93.2 0.27 9.3E-06 50.5 9.4 56 150-206 141-196 (357)
104 2gwg_A 4-oxalomesaconate hydra 92.7 0.48 1.6E-05 48.3 10.4 57 150-206 122-182 (350)
105 4gxw_A Adenosine deaminase; am 92.7 0.49 1.7E-05 49.0 10.5 55 148-205 162-219 (380)
106 2wje_A CPS4B, tyrosine-protein 88.1 3.6 0.00012 39.4 11.5 128 71-205 3-143 (247)
107 3aam_A Endonuclease IV, endoiv 77.9 46 0.0016 31.6 14.7 118 153-289 16-141 (270)
108 3qy7_A Tyrosine-protein phosph 73.9 10 0.00035 36.7 8.7 126 73-205 1-139 (262)
109 3lmz_A Putative sugar isomeras 71.1 25 0.00085 33.3 10.7 103 153-289 32-134 (257)
110 3p6l_A Sugar phosphate isomera 67.4 37 0.0013 32.1 11.1 104 153-289 24-136 (262)
111 4inf_A Metal-dependent hydrola 66.2 7.8 0.00027 39.7 6.1 55 151-206 160-214 (373)
112 2a3l_A AMP deaminase, AMPD; at 64.5 6.2 0.00021 43.9 5.2 58 326-404 583-642 (701)
113 2q02_A Putative cytoplasmic pr 61.4 78 0.0027 29.7 12.2 85 154-260 22-107 (272)
114 3m6y_A 4-hydroxy-2-oxoglutarat 59.0 1E+02 0.0036 29.2 11.6 69 154-227 171-242 (275)
115 3m5v_A DHDPS, dihydrodipicolin 54.8 57 0.0019 32.1 10.0 98 162-261 39-144 (301)
116 3tva_A Xylose isomerase domain 53.8 1.5E+02 0.0052 28.1 13.4 94 158-260 28-124 (290)
117 3l21_A DHDPS, dihydrodipicolin 53.6 74 0.0025 31.3 10.6 97 162-260 47-150 (304)
118 4dzi_A Putative TIM-barrel met 52.0 26 0.0009 36.4 7.2 61 145-206 169-234 (423)
119 3fy3_A Hemolysin; beta helix, 51.1 19 0.00065 34.1 5.3 43 408-470 94-142 (236)
120 3daq_A DHDPS, dihydrodipicolin 47.0 86 0.0029 30.6 9.8 99 161-261 33-138 (292)
121 3aal_A Probable endonuclease 4 46.0 83 0.0029 30.4 9.6 89 153-261 20-117 (303)
122 3flu_A DHDPS, dihydrodipicolin 45.7 1.2E+02 0.0039 29.7 10.5 98 162-261 39-143 (297)
123 1itu_A Renal dipeptidase; glyc 44.9 98 0.0034 31.4 10.0 57 333-403 279-336 (369)
124 3s5o_A 4-hydroxy-2-oxoglutarat 44.5 1.2E+02 0.0043 29.7 10.6 98 162-261 46-152 (307)
125 3na8_A Putative dihydrodipicol 43.1 99 0.0034 30.6 9.6 98 162-261 56-160 (315)
126 3tak_A DHDPS, dihydrodipicolin 42.8 1.2E+02 0.0043 29.4 10.2 98 162-261 33-137 (291)
127 1xky_A Dihydrodipicolinate syn 42.0 1.4E+02 0.0048 29.2 10.5 98 162-261 44-148 (301)
128 3cpr_A Dihydrodipicolinate syn 41.3 1.6E+02 0.0055 28.8 10.8 98 162-261 48-152 (304)
129 3si9_A DHDPS, dihydrodipicolin 41.0 1.1E+02 0.0036 30.4 9.4 97 162-260 54-157 (315)
130 3qze_A DHDPS, dihydrodipicolin 40.8 1.1E+02 0.0038 30.1 9.6 97 162-260 55-158 (314)
131 2ehh_A DHDPS, dihydrodipicolin 40.7 1.4E+02 0.0048 29.0 10.2 98 162-261 32-136 (294)
132 3lgd_A Adenosine deaminase CEC 40.4 1.1E+02 0.0039 32.4 10.0 25 181-205 307-333 (508)
133 2hmc_A AGR_L_411P, dihydrodipi 40.4 1.5E+02 0.0051 29.7 10.5 97 162-260 58-160 (344)
134 3m0z_A Putative aldolase; MCSG 40.3 1.5E+02 0.0051 27.9 9.3 69 154-227 148-219 (249)
135 3dx5_A Uncharacterized protein 40.0 1.7E+02 0.0059 27.5 10.8 87 155-260 19-106 (286)
136 3fkr_A L-2-keto-3-deoxyarabona 39.6 1.4E+02 0.0047 29.4 10.0 98 161-260 39-146 (309)
137 1o5k_A DHDPS, dihydrodipicolin 39.5 1.5E+02 0.0053 29.0 10.3 98 162-261 44-148 (306)
138 2yxg_A DHDPS, dihydrodipicolin 39.3 1.6E+02 0.0053 28.6 10.3 99 161-261 31-136 (289)
139 1rwr_A Filamentous hemagglutin 38.9 50 0.0017 32.4 6.4 41 408-468 90-136 (301)
140 2r8w_A AGR_C_1641P; APC7498, d 38.8 1.5E+02 0.0051 29.5 10.2 98 162-261 66-170 (332)
141 2ftp_A Hydroxymethylglutaryl-C 38.6 2.8E+02 0.0097 26.9 13.0 57 148-207 156-214 (302)
142 3dz1_A Dihydrodipicolinate syn 38.2 1.5E+02 0.0051 29.2 10.0 96 162-261 40-144 (313)
143 1qwg_A PSL synthase;, (2R)-pho 37.6 2.7E+02 0.0094 26.4 11.3 10 103-112 13-22 (251)
144 1qtw_A Endonuclease IV; DNA re 36.9 1.2E+02 0.0042 28.6 9.1 90 153-260 14-111 (285)
145 3b4u_A Dihydrodipicolinate syn 36.9 1.5E+02 0.0051 28.8 9.7 105 154-260 27-142 (294)
146 2v9d_A YAGE; dihydrodipicolini 36.7 1.5E+02 0.0052 29.6 9.9 98 162-261 63-167 (343)
147 3qfe_A Putative dihydrodipicol 36.4 1.9E+02 0.0064 28.5 10.4 111 162-273 43-166 (318)
148 3erp_A Putative oxidoreductase 36.3 3.3E+02 0.011 27.0 19.0 117 88-205 61-190 (353)
149 3h5d_A DHDPS, dihydrodipicolin 36.3 1.5E+02 0.0052 29.1 9.7 97 162-260 39-143 (311)
150 2vc6_A MOSA, dihydrodipicolina 36.2 1.2E+02 0.0041 29.5 8.9 97 162-260 32-135 (292)
151 2wkj_A N-acetylneuraminate lya 35.8 1.7E+02 0.0059 28.5 10.0 97 162-260 43-147 (303)
152 2r91_A 2-keto-3-deoxy-(6-phosp 35.8 1.5E+02 0.0051 28.7 9.5 98 162-261 30-132 (286)
153 1f6k_A N-acetylneuraminate lya 35.5 1.8E+02 0.0061 28.3 10.0 96 163-260 37-139 (293)
154 2nx9_A Oxaloacetate decarboxyl 34.4 4.2E+02 0.014 27.6 15.7 126 94-224 103-230 (464)
155 2rfg_A Dihydrodipicolinate syn 34.1 1.6E+02 0.0055 28.6 9.5 98 162-261 32-136 (297)
156 2ojp_A DHDPS, dihydrodipicolin 34.1 1.3E+02 0.0044 29.2 8.7 98 162-261 33-137 (292)
157 2cw6_A Hydroxymethylglutaryl-C 34.0 2.8E+02 0.0094 26.9 11.2 57 147-206 152-210 (298)
158 3e96_A Dihydrodipicolinate syn 33.6 99 0.0034 30.5 7.9 96 162-259 44-145 (316)
159 2x7v_A Probable endonuclease 4 32.7 3.1E+02 0.011 25.6 13.0 86 157-260 18-111 (287)
160 3a5f_A Dihydrodipicolinate syn 32.4 1.4E+02 0.0049 28.9 8.7 99 161-261 32-137 (291)
161 2yxo_A Histidinol phosphatase; 32.2 22 0.00077 33.8 2.7 37 73-112 1-39 (267)
162 3ly0_A Dipeptidase AC. metallo 32.1 3.1E+02 0.01 27.7 11.2 56 333-403 297-353 (364)
163 2i5g_A Amidohydrolase; NYSGXRC 31.9 3.5E+02 0.012 26.7 11.6 41 360-402 280-320 (325)
164 1nvm_A HOA, 4-hydroxy-2-oxoval 31.6 3.9E+02 0.013 26.4 12.4 120 97-223 99-222 (345)
165 2nuw_A 2-keto-3-deoxygluconate 29.5 1.5E+02 0.0051 28.8 8.2 98 162-261 31-133 (288)
166 2nx9_A Oxaloacetate decarboxyl 29.5 5E+02 0.017 27.0 17.1 178 88-280 27-227 (464)
167 1m65_A Hypothetical protein YC 29.4 28 0.00094 32.7 2.8 37 73-112 3-41 (245)
168 3eb2_A Putative dihydrodipicol 28.4 1E+02 0.0036 30.1 6.9 98 162-261 36-140 (300)
169 1r30_A Biotin synthase; SAM ra 27.2 2.5E+02 0.0087 27.9 9.9 70 152-224 104-173 (369)
170 1w3i_A EDA, 2-keto-3-deoxy glu 26.9 1.6E+02 0.0056 28.5 8.0 98 162-261 31-133 (293)
171 1ydo_A HMG-COA lyase; TIM-barr 26.6 2.9E+02 0.01 26.9 9.9 57 148-207 154-212 (307)
172 1ydn_A Hydroxymethylglutaryl-C 25.8 4.5E+02 0.015 25.2 12.4 57 147-206 151-209 (295)
173 2zds_A Putative DNA-binding pr 25.0 4.6E+02 0.016 25.1 11.3 100 153-260 17-133 (340)
174 3d0c_A Dihydrodipicolinate syn 24.3 2.6E+02 0.0087 27.5 9.0 95 162-258 44-144 (314)
175 1n7k_A Deoxyribose-phosphate a 24.0 4.5E+02 0.015 24.6 11.3 113 86-206 31-143 (234)
176 2qul_A D-tagatose 3-epimerase; 23.6 4.5E+02 0.015 24.4 13.3 87 154-258 20-108 (290)
177 1rqb_A Transcarboxylase 5S sub 23.3 6.9E+02 0.024 26.5 17.3 178 88-280 44-246 (539)
178 3dcp_A Histidinol-phosphatase; 23.0 1.6E+02 0.0055 28.4 7.1 37 73-111 2-40 (283)
179 1i60_A IOLI protein; beta barr 22.2 4.5E+02 0.015 24.1 10.2 21 238-258 84-104 (278)
180 2yb1_A Amidohydrolase; HET: AM 22.0 50 0.0017 32.2 3.1 32 73-108 3-34 (292)
181 3n2t_A Putative oxidoreductase 21.9 5.7E+02 0.02 25.1 14.0 117 88-205 49-177 (348)
182 4a29_A Engineered retro-aldol 21.5 3.5E+02 0.012 25.8 8.8 51 162-221 124-174 (258)
183 3civ_A Endo-beta-1,4-mannanase 20.4 2.9E+02 0.01 27.4 8.5 50 151-201 54-115 (343)
184 3lmz_A Putative sugar isomeras 20.3 5E+02 0.017 23.8 11.1 16 93-108 32-47 (257)
185 3obe_A Sugar phosphate isomera 20.0 4.3E+02 0.015 25.3 9.6 50 152-202 77-133 (305)
No 1
>2vr2_A Dihydropyrimidinase; hydantoinase, metal-binding, disease mutation, dihydropyrimi amidohydrolase, nucleotide metabolism, DPYS, dhpase, hydrolase; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-77 Score=666.66 Aligned_cols=503 Identities=55% Similarity=0.940 Sum_probs=447.3
Q ss_pred ccccEEEEccEEEcCCCceeeEEEEECCEEEEeecCCCCCCCC----eEEecCCCEEeeCccccCcCcccccCCCCChhh
Q psy6858 17 SQNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGV----RVIDAAGSYVIPGGIDPHTHFELELMGATSVDD 92 (592)
Q Consensus 17 ~~~~llIkng~Iv~~d~~~~~dV~I~dG~I~~Ig~~~~~~~~~----~vIDa~G~~V~PG~ID~HtH~~~~~~~~~~~d~ 92 (592)
.+++++|+|++|++++....++|+|+||+|++|++....+.+. ++||++|++|||||||+|+|+.+++.+....++
T Consensus 25 ~~~~~lI~ng~Vv~~~~~~~~dV~I~dGrI~~Ig~~~~~~~~~~~~~~vIDa~G~~V~PG~ID~H~Hl~~~~~~~~~~e~ 104 (541)
T 2vr2_A 25 APSRLLIRGGRVVNDDFSEVADVLVEDGVVRALGHDLLPPGGAPAGLRVLDAAGKLVLPGGIDTHTHMQFPFMGSRSIDD 104 (541)
T ss_dssp --CEEEEESCEEECSSCEEECEEEEETTEEEEEEC-----------CEEEECTTSEEEECEEEEEECTTCBCSSSBCSCC
T ss_pred ccCCEEEECcEEEcCCCceEeeEEEECCEEEEeccCCCCCcccccCceEEECCCCEEccCEEEecccCCCCCCCCcCHHH
Confidence 4579999999999988777899999999999999865433333 899999999999999999999888766667889
Q ss_pred HHHHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChHHHHHHHHHHHHcCCcEEEEEE
Q psy6858 93 FYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFM 172 (592)
Q Consensus 93 ~~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~Gv~~~k~~~ 172 (592)
++.++++++++||||++|+..+.....+.++++.++.++..+.++++++|..++.|.+...+++++++++.|+..++.|+
T Consensus 105 ~~~~~~~al~~GvTtv~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~g~h~~~~~~~~~~~~el~~l~~~~G~~~~k~~~ 184 (541)
T 2vr2_A 105 FHQGTKAALSGGTTMIIDFAIPQKGGSLIEAFETWRSWADPKVCCDYSLHVAVTWWSDQVKEEMKILVQDKGVNSFKMFM 184 (541)
T ss_dssp TTHHHHHHHTTTEEEEEEEECCCTTCCHHHHHHHHHHHHTTTCSSEEEEEEEECSCSHHHHHHHHHHHHTSCCCEEEEES
T ss_pred HHHHHHHHHhCCeeeeccccCCCCCCCHHHHHHHHHHHhccCceEEEeeeecccCCCHHHHHHHHHHHHhCCCCEEEEEe
Confidence 99999999999999999987766667788999999888776778899999999999888888999998777999999999
Q ss_pred eeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCC
Q psy6858 173 AYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDC 252 (592)
Q Consensus 173 ~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~ 252 (592)
++++.+.+++++|+++++.|++++.++++|+|+...+.....++.+.|++++++|..++|+++|.+++.+++.+++..+|
T Consensus 185 ~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~h~~~~~~~~e~~a~~~~~~la~~~~~ 264 (541)
T 2vr2_A 185 AYKDLYMVTDLELYEAFSRCKEIGAIAQVHAENGDLIAEGAKKMLALGITGPEGHELCRPEAVEAEATLRAITIASAVNC 264 (541)
T ss_dssp SSTTTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHHTC
T ss_pred ccCCccCCCHHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHHcCCCChhhccccchhHHHHHHHHHHHHHHHHhCC
Confidence 98888889999999999999999999999999988777888899999999999999999999999999999999999999
Q ss_pred CEEEEecccHHHHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCc-ccccccceecCCCCCCCCCHHHHHHHHh
Q psy6858 253 PLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCT-WHDQAAHVLSPPLRPDETTPTHLLTLLN 331 (592)
Q Consensus 253 pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~-~~~~~~~~~~pplr~~~~~~~~l~~~l~ 331 (592)
|+|++|+++....+.|+.+|+. |+ .|++|+++++|.+|+.++... |...+.++++||+|.+.+++++||+++.
T Consensus 265 p~~~~h~ss~~~~~~i~~ar~~----G~--~v~~e~~~~~L~~d~~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~ 338 (541)
T 2vr2_A 265 PLYIVHVMSKSAAKVIADARRD----GK--VVYGEPIAASLGTDGTHYWNKEWHHAAHHVMGPPLRPDPSTPDFLMNLLA 338 (541)
T ss_dssp CEEEEEECCHHHHHHHHHHHHT----TC--CEEEEEBHHHHHCCSGGGGCSSHHHHHTTCCSSCCCSCTTHHHHHHHHHH
T ss_pred CEEEEeCCCHHHHHHHHHHHHc----CC--eEEEEeehhhhcCCHHHhcCccccccCceEECCCCCCCcchHHHHHHHHh
Confidence 9999999999999999999998 99 999999999999999988766 7777788999999987778999999999
Q ss_pred cCCceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCcccc
Q psy6858 332 ENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIA 411 (592)
Q Consensus 332 ~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~ 411 (592)
.|.+.+++|||++++..++..++++|..+|+|++|+|.+|..+|.+++..++|+++++++++|+|||++||+++++|+|+
T Consensus 339 ~g~~~~~gtD~~~~~~~~k~~~~~~~~~~p~G~~G~e~~l~~~~~~~v~~~~l~~~~~~~~~T~~pA~~lgl~~~~G~i~ 418 (541)
T 2vr2_A 339 NDDLTTTGTDNCTFNTCQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKIFNLYPRKGRIA 418 (541)
T ss_dssp TTSSCCCBCCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHTTCTTTSSCCS
T ss_pred cCCeEEEEeCCCCCChHHhcccCCChhhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCCCCCCccC
Confidence 99999999999999999999888899999999999999999999999999999999999999999999999998999999
Q ss_pred CCCCccEEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEECCEEEEECCeeeecCCCceeecCCCCCCccccCC
Q psy6858 412 EGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLPTHTNPPFVYEGQ 491 (592)
Q Consensus 412 ~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv~GkvV~~~g~l~~~~g~g~~~~~~~~~~~~~~~~ 491 (592)
+|++|||||||++..++++.+.+++..+|+||+|+.+.|+|..||++|++||++|+++...|.||||+|++|++|+|+++
T Consensus 419 ~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~p~~g~~~~g~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~~~~~~~~~~~~ 498 (541)
T 2vr2_A 419 VGSDADIVIWDPKGTRTISAKTHHQAVNFNIFEGMVCHGVPLVTISRGKVVYEAGVFSVTAGDGKFIPRKPFAEYIYKRI 498 (541)
T ss_dssp TTSBCCEEEEEEEEEEECCTTTCSSSCSCCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCSCBCCCCSSCHHHHHHH
T ss_pred CCCCCCEEEEcCCcCeEeCHHHhhcccCCCccCCCEEeeeEEEEEECCEEEEECCeeccCCCCceEecCCCCcchhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999998899999999999999999999
Q ss_pred CcccccccccCcccchhccccccCCCCCCCCccCCCCCCCcCCCCCccCCC
Q psy6858 492 TPEVDIDHKENHEVIEEIREKLHGLTPNNNHKISAPRSPSYSSTSSVYGDA 542 (592)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (592)
++|+++. ++++|+|+ +|+||| + +++. ++|..+|+
T Consensus 499 ~~~~~~~---~~~~~~~~---~~~~~~------~---~~~~--~~~~~~~~ 532 (541)
T 2vr2_A 499 KQRDRTC---TPTPVERA---PYKGEV------A---TLKS--RVTKEDAT 532 (541)
T ss_dssp HHHHHHS---SCCCCCCC---CC----------------------------
T ss_pred HHHHhhc---CCCCcccC---CccCcc------c---cccC--CCCCCCcc
Confidence 9999998 78999999 999999 7 6666 66655544
No 2
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.5e-76 Score=648.87 Aligned_cols=483 Identities=42% Similarity=0.766 Sum_probs=453.4
Q ss_pred ccEEEEccEEEcCCCceeeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccCCCCChhhHHHHHH
Q psy6858 19 NRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGTK 98 (592)
Q Consensus 19 ~~llIkng~Iv~~d~~~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~~~~~d~~~~~~~ 98 (592)
|+++|+|++|++++....++|+|+||+|++|++... +.++||++|++|+|||||+|+|+..++++....++++.+++
T Consensus 1 m~~~i~~~~v~~~~~~~~~~v~I~~G~I~~i~~~~~---~~~viD~~g~~v~PG~ID~H~H~~~~~~~~~~~e~~~~~~~ 77 (490)
T 3dc8_A 1 MSTVIKGGTIVTADLTYKADVKVEGGRIVEIGPNLS---GAETLDATGCYVMPGGIDPHTHLEMPFMGTYSSDDFESGTR 77 (490)
T ss_dssp -CEEEESCEEECSSCEEECEEEEETTEEEEEESSCC---CSEEEECTTCEEEECEEEEEECTTCEETTEECSCCHHHHHH
T ss_pred CcEEEEccEEECCCCceeeeEEEECCEEEEeccCCC---CCeEEECCCCEEecCEEeeccccCCCCCCCCCHHHHHHHHH
Confidence 579999999999988888999999999999998654 67899999999999999999999988877678999999999
Q ss_pred HHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChHHHHHHHHHHHHcCCcEEEEEEeeCCCc
Q psy6858 99 AAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLY 178 (592)
Q Consensus 99 ~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~Gv~~~k~~~~~~~~~ 178 (592)
+++++||||++++..+.+...+.++++.+...+. +..++|+++..++.+.++..+++.+++++.|+.+||+||+|++..
T Consensus 78 aa~~~GvTtv~~~~~~~p~~~~~~~~~~~~~~a~-~~~~d~~~~~~~~~~~~~~l~el~~l~~~~G~~~~k~~~~~~~~~ 156 (490)
T 3dc8_A 78 AALAGGTTMVVDFALPSPGQSLLEALTMWDNKST-RANCDYSFHMAITWWGEQVFNEMETIVKDKGINTFKHFMAYKGAL 156 (490)
T ss_dssp HHHHTTEEEEEEEECCC-CCCHHHHHHHHHHHTT-TCSSEEEEEEECCSCSHHHHHHHHHHHHHSCCCEEEEESCSTTTT
T ss_pred HHHHcCEEeecccCCCCCCcCHHHHHHHHHHHhh-cccceeeeEEEEecCcHHHHHHHHHHHHhCCCCEEEEEecCCCCc
Confidence 9999999999999888777888999999998887 788999999999999888889999998667999999999998888
Q ss_pred CCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEe
Q psy6858 179 MLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVH 258 (592)
Q Consensus 179 ~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~h 258 (592)
.+++++|+++++.++++|+++++|+|+.+++......+...|...++.|..++|...|.+++.+++.+++..++|+|++|
T Consensus 157 ~~~~~~l~~~~~~a~~~g~~v~~HaE~~~~i~~~~~~~~~~g~~~~~~~~~~rP~~~E~~av~r~i~la~~~g~~lhi~H 236 (490)
T 3dc8_A 157 MVDDDEMFSSFQRCAALGALPLVHAENGDVVAQLQAKLLAEGNSGPEAHAYSRPAEVEGEAANRAIMIADMAGCPVYIVH 236 (490)
T ss_dssp BCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSHHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEESS
T ss_pred cCCHHHHHHHHHHHHhcCCEEEEecCChHHHHHHHHHHHhcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 88999999999999999999999999999998888899999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCc-ccccccceecCCCCCCCCCHHHHHHHHhcCCceE
Q psy6858 259 IMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCT-WHDQAAHVLSPPLRPDETTPTHLLTLLNENALQT 337 (592)
Q Consensus 259 v~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~-~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~ 337 (592)
+++.++.++|+.+|++ |+ .|++|+|+++|.++...+... |.+++.++++||+|. ..++++||+.|+.|.+++
T Consensus 237 vSt~~~~~li~~ak~~----G~--~Vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~~Pplr~-~~d~~aL~~~l~~G~id~ 309 (490)
T 3dc8_A 237 TSCEQAHEAIRRARAK----GM--RVFGEPLIQHLTLDETEYFDKDWDHAARRVMSPPFRN-KLHQDSLWAGLASGSLQV 309 (490)
T ss_dssp CCSHHHHHHHHHHHHT----TC--CEEECCBHHHHHCCGGGGGCSCHHHHHHTCCSSCCCC-GGGHHHHHHHHHHTSSCC
T ss_pred CCCHHHHHHHHHHHHC----CC--eEEEEEchHHheeCHHHhcCcCcccCCceEECCCCCC-hHHHHHHHHHHhcCCceE
Confidence 9999999999999999 99 999999999999999998775 665778999999998 789999999999999999
Q ss_pred EeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCcc
Q psy6858 338 TGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDAD 417 (592)
Q Consensus 338 ~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~AD 417 (592)
++|||+|++..+|..|.++|.++|+|++|+|.+|+++|+.++..++|+++++++++|.|||++||+++++|+|++|++||
T Consensus 310 i~sDh~p~~~~~K~~g~~~f~~~~~G~~gle~~l~~~~~~~v~~~~l~~~~~~~~~t~~~A~~~gl~~~~G~l~~G~~AD 389 (490)
T 3dc8_A 310 VATDHCAFTTEQKRFGVGDFTRIPNGTGGLEDRMPMLWTYGVATGRITMNEFVAVTSTNIAKILNIYPKKGAILVGADAD 389 (490)
T ss_dssp CBCCBCCCCHHHHGGGTTCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHTTCTTTSSCCSTTSBCC
T ss_pred EECCCCCCCHHHhhccCCChhhCCCChHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCCCCccCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEECCEEEEECCeeeecCCCceeecCCCCCCccccCCCccccc
Q psy6858 418 IVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLPTHTNPPFVYEGQTPEVDI 497 (592)
Q Consensus 418 lVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv~GkvV~~~g~l~~~~g~g~~~~~~~~~~~~~~~~~~~~~~ 497 (592)
|||||++..++++.+.+++...|+||+|+++.|+|..||++|++||++|++....|.||||++++|++ +|+++++|+++
T Consensus 390 lvv~d~~~~~~i~~~~~~s~~~~sp~~g~~~~g~v~~t~~~G~~v~~~g~~~~~~~~G~~~~~~~~~~-~~~~~~~~~~~ 468 (490)
T 3dc8_A 390 LVVWDPKRSKTISAKTQQSAIDYNVFEGKTVTGLPRFTLTRGVVSIEEGTVKTQEGHGEFVRRDPFPA-VSTALSTWKEV 468 (490)
T ss_dssp EEEEEEEEEEECCTTTCSSSSSCCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCCCBCCCCSCCH-HHHHHHHHHHH
T ss_pred EEEEecCcceEechhhccccCCCCcccCcEEeeEEEEEEECCEEEEECCEEcccCCCceeccCCCCcc-hhHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999998 89999999999
Q ss_pred ccccCcccchhccccccCCC
Q psy6858 498 DHKENHEVIEEIREKLHGLT 517 (592)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~ 517 (592)
. ++++|+|+.. |-+|.
T Consensus 469 ~---~~~~~~~~~~-~~~~~ 484 (490)
T 3dc8_A 469 T---APRAVQRSGI-PASGV 484 (490)
T ss_dssp H---CCCCCCCSSC-CCCSC
T ss_pred c---CccccccCCC-Ccccc
Confidence 8 8999999733 44443
No 3
>2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=1.3e-75 Score=647.47 Aligned_cols=489 Identities=47% Similarity=0.847 Sum_probs=445.8
Q ss_pred ccccEEEEccEEEcCCCceeeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccCCCCChhhHHHH
Q psy6858 17 SQNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHG 96 (592)
Q Consensus 17 ~~~~llIkng~Iv~~d~~~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~~~~~d~~~~~ 96 (592)
.+++++|+|++|++++....++|+|+||+|++|++....+.+.++||++|++|||||||+|+|+.+++.+..+.++++.+
T Consensus 6 ~~~~~lI~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~v~PGlID~H~H~~~~~~~~~~~e~~~~~ 85 (521)
T 2ftw_A 6 QTGTILIKNGTVVNDDRYFKSDVLVENGIIKEISKNIEPKEGIKVVDATDKLLLPGGIDTHTHFQLPFMGTVSVDDFDIG 85 (521)
T ss_dssp -CCCEEEESCEEECSSCEEECEEEEETTEEEEEESCCCCCSSCCEEECTTCEEEECEEEEEECTTCEETTEECSSCHHHH
T ss_pred ccCCEEEECcEEECCCCceeeeEEEECCEEEEecCCCCCCCCCeEEECCCCEEecCEEeeecccCcCCCCccCHHHHHHH
Confidence 36789999999999887778999999999999998754444678999999999999999999998887666678899999
Q ss_pred HHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChHHHHHHHHHHHHcCCcEEEEEEeeCC
Q psy6858 97 TKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKG 176 (592)
Q Consensus 97 ~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~Gv~~~k~~~~~~~ 176 (592)
+++++++||||++|+..+.....+.++++.++.++..+.++++++|..++.|.+...+++.+++++.|+..++.|+++++
T Consensus 86 ~~~a~~~G~Ttv~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~g~h~~~~~~~~~~~~~l~~l~~~~G~~~~k~~~~~~~ 165 (521)
T 2ftw_A 86 TQAAVAGGTTFIIDFVIPTRGQSLLEAYDQWKKWADEKVNCDYSLHVAITWWSEQVSREMEILVKERGVNSFKCFMAYKN 165 (521)
T ss_dssp HHHHHHTTEEEEEEEECCCTTCCHHHHHHHHHHHHHTTCSSEEEEEEECCSCCHHHHHHHHHHHHHSCCCEEEEESSCTT
T ss_pred HHHHHhCCcceecCcCCCCCCcCHHHHHHHHHHHhhcCceeeEeeEEeecCCChhHHHHHHHHHHhCCCCEEEEEeccCC
Confidence 99999999999999876665667889999888887666788999999999998888889999987789999999999888
Q ss_pred CcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEE
Q psy6858 177 LYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYV 256 (592)
Q Consensus 177 ~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i 256 (592)
.+.+++++|+++++.|+++|.++++|+++...+....+++.+.|++++++|..++|+++|.+++.+++.+++..++|+|+
T Consensus 166 ~~~~~~e~l~~~~~~A~~~g~~v~vH~e~~~~~~~~~~~l~~~G~~~~~~h~~~~~~~~e~~a~~~~~~la~~~~~p~hi 245 (521)
T 2ftw_A 166 SFMVTDQEMYHIFKRCKELGAIAQVHAENGDMVFEGQKKMLEMGITGPEGHELSRPEALEAEATNRAIVIADSVCTPVYI 245 (521)
T ss_dssp TTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHHSCTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHHcCCCChhhccccCcHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 78899999999999999999999999999887777888999999999999999999999999999999999999999999
Q ss_pred EecccHHHHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCc-ccccccceecCCCCCCCCCHHHHHHHHhcCCc
Q psy6858 257 VHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCT-WHDQAAHVLSPPLRPDETTPTHLLTLLNENAL 335 (592)
Q Consensus 257 ~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~-~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~ 335 (592)
.|+++....+.|+.+|+. |+ .+++|+++++|.+|+.++... |...+.++++||+|.+..++++||+++..|.+
T Consensus 246 ~h~ss~~~~~~i~~~r~~----G~--~v~~e~~~~~L~~d~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~g~~ 319 (521)
T 2ftw_A 246 VHVQSIGAADVICKHRKE----GV--RVYGEPIAAGLGVDGSHMWNHDWRHAAAFVMGPPIRPDPRTKGVLMDYLARGDL 319 (521)
T ss_dssp CSCCCHHHHHHHHHHHHT----TC--CEEECCBHHHHHCCGGGGGCSSHHHHHTTCCSSCCCCCTTHHHHHHHHHHHTSS
T ss_pred EecCcHHHHHHHHHHHHc----CC--eEEEEEcchhhccCHHHhcCCCcccCcceEEcCCCCCChhhHHHHHHHhcCCCE
Confidence 999999999999999999 99 999999999999999998766 76677788999999766789999999999999
Q ss_pred eEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCC
Q psy6858 336 QTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSD 415 (592)
Q Consensus 336 ~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ 415 (592)
.+++|||++++..++..++++|..+|+|++|++.+|+.+|..++..++++++++++++|.|||++||+++++|+|++|++
T Consensus 320 ~~~gsD~~~~~~~~k~~~~~~~~~~p~G~~G~e~~l~~~~~~~v~~~~l~~~~~~~~~t~~~A~~~gl~~~~G~i~~G~~ 399 (521)
T 2ftw_A 320 DCVGTDNCTFCADQKAMGKDDFTKIPNGVNGVEDRMSIVWENGVNTGKLTWCQFVRATSSERARIFNIYPRKGRIDVGCD 399 (521)
T ss_dssp CCCBCCBCCCCHHHHGGGTTCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHTTCTTTSSCCSTTSB
T ss_pred EEEEeCCCCCCHHHhhcccCChhhCCCCCccHHHHHHHHHHHHHhcCCCCHHHHHHHhChhHHHHhCCCCCCCCcCCCCc
Confidence 99999999999988888888999999999999999999999999999999999999999999999999989999999999
Q ss_pred ccEEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEECCEEEEECCeeeecCCCceeecCCCCCCccccCCCccc
Q psy6858 416 ADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLPTHTNPPFVYEGQTPEV 495 (592)
Q Consensus 416 ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv~GkvV~~~g~l~~~~g~g~~~~~~~~~~~~~~~~~~~~ 495 (592)
|||||||++..++++.+.+++.++|+||+|+.+.|.|..||++|++||++|+++...|.||||+|++|++ +|+++++|+
T Consensus 400 ADlvv~d~~~~~~i~~~~~~~~~~~~p~~g~~~~g~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~~~~~~-~~~~~~~~~ 478 (521)
T 2ftw_A 400 GDIVIWDPNQSKTISKDTHHHAVDFNIFEGIKVTGIAVTTIVAGNIVWSDNKLSCVKGSGRFVPRPPFGP-VFDGIEQRD 478 (521)
T ss_dssp CCEEEEEEEEEEECCTTTCCCSSSCCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCCCBCCCCSSCG-GGTTHHHHH
T ss_pred CCEEEEeCCCCEEEChHHccccCCCCCcCCCEeeeeEEEEEECCEEEEECCeecccCcCceEecCCCCCc-hHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998889999999999998 899999999
Q ss_pred ccccccC--cccchhccccccCCCC
Q psy6858 496 DIDHKEN--HEVIEEIREKLHGLTP 518 (592)
Q Consensus 496 ~~~~~~~--~~~~~~~~~~~~~~~~ 518 (592)
++. + +++|+|+ +|+|||
T Consensus 479 ~~~---~~~~~~~~~~---~~~~~~ 497 (521)
T 2ftw_A 479 KVR---NELLRKVDRK---PYEDDN 497 (521)
T ss_dssp HHH---CGGGGCCCC----------
T ss_pred hhh---ccCCcCCccC---CCCCcc
Confidence 998 6 8999999 999999
No 4
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=100.00 E-value=6.9e-67 Score=569.33 Aligned_cols=457 Identities=40% Similarity=0.647 Sum_probs=421.6
Q ss_pred ccEEEEccEEEcCCCceeeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccCCCCChhhHHHHHH
Q psy6858 19 NRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGTK 98 (592)
Q Consensus 19 ~~llIkng~Iv~~d~~~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~~~~~d~~~~~~~ 98 (592)
|+++|+|++|+|++....++|+|+||+|++|++... +.+.++||++|++|+|||||+|+|+..++.+....++++.+++
T Consensus 1 M~~~i~n~~v~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~~~~~e~~~~~~~ 79 (461)
T 3sfw_A 1 MKKWIRNGTVVTASDTYQADVLIDGEKVVAIGSDLQ-ATDAEVIDATGYYLLPGGIDPHTHLDMPFGGTVTSDNFFTGTK 79 (461)
T ss_dssp CEEEEESCEEECSSCEEECEEEEETTEEEEEESCCC-CSSCEEEECTTCEEEECEEEEEECTTCEETTEECSCCHHHHHH
T ss_pred CcEEEECeEEECCCCcEEEEEEEECCEEEEEeCCCC-CCCCeEEECCCCEEEeeeEEeEeccCcCCCCcccHhHHHHHHH
Confidence 579999999999888889999999999999998754 3577999999999999999999999887666678899999999
Q ss_pred HHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChHHHHHHHHHHHHcCCcEEEEEEeeCCCc
Q psy6858 99 AAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLY 178 (592)
Q Consensus 99 ~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~Gv~~~k~~~~~~~~~ 178 (592)
+++++||||++++....+...+.++++.+...+..+..++++++..++.+.++..+++++++++.|+..+|.|+.|.+..
T Consensus 80 ~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~~~ik~~~~~~~~~ 159 (461)
T 3sfw_A 80 AAAFGGTTSIVDFCLTSKGESLHSAIATWHEKARGKAVIDYGFHLMVSDANDHVLEELESVVNNEGITSLKVFMAYKNVL 159 (461)
T ss_dssp HHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECSCCCHHHHHHHHHHHHTSCCCEEEEESSSTTTT
T ss_pred HHHhCCEEEEEccCCCCCcchHHHHHHHHHHHhhcCcEEEEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEEEEecCCCc
Confidence 99999999999998776677888889888888777888999999988888888889999998756999999999987777
Q ss_pred CCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEe
Q psy6858 179 MLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVH 258 (592)
Q Consensus 179 ~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~h 258 (592)
.+++++++++++.++++|.++.+|+++...+......+...|...+..|..++|...|.+++.+++.+++..++++|++|
T Consensus 160 ~~~~~~l~~~~~~a~~~g~~v~~Hae~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~~hi~H 239 (461)
T 3sfw_A 160 MADDETLFKTLIRAKELGALVQVHAENGDVLDYLTKQALAEGNTDPIYHAYTRPPEAEGEATGRAIALTALADAQLYVVH 239 (461)
T ss_dssp BCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHTTCEEEECS
T ss_pred ccCHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHhcCCCChhHhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 78999999999999999999999999999888888888999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCCceEE
Q psy6858 259 IMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTT 338 (592)
Q Consensus 259 v~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~ 338 (592)
+++.++.+.|+.+|++ |+ .|++|+|++++.++...+...-.....++++||+|. ..++++||++++.|..+++
T Consensus 240 ~s~~~~l~~i~~ak~~----G~--~vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~Pplr~-~~~~~aL~~~l~~G~~~~i 312 (461)
T 3sfw_A 240 VSCADAVRRIAEAREK----GW--NVYGETCPQYLVLDITALEKPDFEGAKYVWSPPLRE-KWNQDVLWSALKNGILQTV 312 (461)
T ss_dssp CCSHHHHHHHHHHHHT----TC--EEEEEECHHHHHCCGGGGGCTTTGGGGGCCSSCCCC-THHHHHHHHHHHTTSSCEE
T ss_pred cCcHHHHHHHHHHHhc----CC--cEEEeeccceEEEcHHHhcCccccCCcEEEcCCCCC-hHHHHHHHHHHhcCCceEE
Confidence 9999999999999999 99 999999999999999887653113567889999998 7889999999999999999
Q ss_pred eCCCCCCC-hhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCcc
Q psy6858 339 GSDNCTFN-KNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDAD 417 (592)
Q Consensus 339 gsD~~~~~-~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~AD 417 (592)
+|||++++ ...+..+.++|..+|+|++|+|.+++.+|++++..+.+++.++++++|.|||++||+++++|+|++|++||
T Consensus 313 ~sD~~p~~~~~~k~~~~~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~~~~~G~l~~G~~Ad 392 (461)
T 3sfw_A 313 GSDHCPFNFSGQKELGRRDFTKIPNGGPIIEDRMTILFSEGVRKGKISLNQFVDITSTKVAKLFGMFPQKGTIAVGSDAD 392 (461)
T ss_dssp CCCBCCCCTTTTGGGGTTCGGGSCCCBCCTTTHHHHHHHHTTTTTSSCHHHHHHHHTHHHHHHHTCTTTSSSCSTTSBCC
T ss_pred ECCCCCCCchhhhhcccCCHhhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHcCCCCCCCccCCCCcCC
Confidence 99999998 45565777899999999999999999999999999999999999999999999999988999999999999
Q ss_pred EEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEECCEEEEECCeeeecCCCceeecCCCC
Q psy6858 418 IVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLPTHTN 483 (592)
Q Consensus 418 lVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv~GkvV~~~g~l~~~~g~g~~~~~~~~ 483 (592)
|||||++..++++.+.+++...|+||+|+.+.|+|..||++|++||++|++....+.||||++++.
T Consensus 393 ~~~~d~~~~~~~~~~~~~~~~~~sp~~g~~~~~~v~~t~v~G~~v~~~g~~~~~~~~G~~~~~~~~ 458 (461)
T 3sfw_A 393 IVLFDPTVQRTISVETHHMNVDYNPFEGMQVHGDVISVLSRGAFVVRNKQFVGHAGAGRYVKRSTF 458 (461)
T ss_dssp EEEEEEEEEEECCTTTCCSSSSCCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCCCBCCCCCC
T ss_pred EEEEcCCCCEEEchHHcccccCCCCCCCCEecceEEEEEECCEEEEECCeeccCCCCceEecCCCC
Confidence 999999999999999999999999999999999999999999999999999988889999998774
No 5
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*
Probab=100.00 E-value=1.2e-65 Score=570.76 Aligned_cols=454 Identities=34% Similarity=0.569 Sum_probs=396.0
Q ss_pred cccEEEEccEEEcCCCceeeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccC-CCCChhhHHHH
Q psy6858 18 QNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELM-GATSVDDFYHG 96 (592)
Q Consensus 18 ~~~llIkng~Iv~~d~~~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~-~~~~~d~~~~~ 96 (592)
+|+++|+|++|++++....++|+|+||+|++|++....+.+.++||++|++|||||||+|+|+.++.. +....++++.+
T Consensus 2 ~m~~li~n~~vv~~~~~~~~~v~I~~g~I~~Ig~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~e~~~~~ 81 (559)
T 2fty_A 2 IYDLIIKNGIICTASDIYAAEIAVNNGKVQLIAASIDPSLGSEVIDAEGAFITPGGIDAHVHVDEPLKLLGDVVDTMEHA 81 (559)
T ss_dssp CEEEEEESCEEECSSCEEECEEEEETTEEEEEESCCCGGGEEEEEECTTCEEEECEEECCBCCCCTTCTTSCCSCCHHHH
T ss_pred CceEEEECcEEEcCCCceeeeEEEECCEEEEecCCCCCCCCCeEEeCCCCEEEcCEEeeccCcCccccccCCCHHHHHHH
Confidence 46899999999998877789999999999999986543235689999999999999999999987641 22367889999
Q ss_pred HHHHHcCCeeEEeccccCC---CCcc-HHHHH----HHHHHHhccCceeeeeccccccCC---ChH---HH-HHHHHHHH
Q psy6858 97 TKAAVAGGTTTIIDFALPR---KGES-LIKTY----ESWRQKADEKVCCDYALHVGITWW---SDQ---VQ-QEMAELCE 161 (592)
Q Consensus 97 ~~~ala~GtTti~d~~~~~---~~~~-~~~a~----~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~-~~~~~lv~ 161 (592)
+++++++||||++|+.... ++.. +.+++ +++..+ +..++++++..++.+ .++ .. +++.++++
T Consensus 82 ~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~~~~~~g~~l~~~~~~l~~ 158 (559)
T 2fty_A 82 TRSAVAGGTTTVVAFSTQDVSKKGPSALAESVKLDVDEYSEQ---TLYCDYGLHLILFQIEKPSVEARELLDVQLQAAYN 158 (559)
T ss_dssp HHHHHHTTEEEEEEEEECCTTCCSTTHHHHHHHHHHHHHTTS---CCSSEEEEEEECCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCcEEEEEECcCcccCCcchHHHHHHHHHHHHHHHhh---cceeEEEeeeeeccCcCCCchhhhhHHHHHHHHHH
Confidence 9999999999999987544 3344 56666 554332 466788887766665 344 56 78888886
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVT 241 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~ 241 (592)
+.|+..+|+++++++ +.+++++|+++++.|+++|+++++|+++...+......+.+.|.+.++.|..++|...|.+++.
T Consensus 159 ~~G~~~iki~~~~~~-~~~s~e~l~~~~~~A~~~g~~v~~H~e~~~~i~~~~~~~~~~G~~~~~~~~~~~p~~~E~~av~ 237 (559)
T 2fty_A 159 DYGVSSVKMFMTYPG-LQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQGLTDAYYHGVSRPSIVEGEATN 237 (559)
T ss_dssp HHCCCEEEEESSSTT-TBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSTTHHHHTSCHHHHHHHHH
T ss_pred HCCCCEEEEEecCCC-CcCCHHHHHHHHHHHHhCCCEEEEECCChHHHHHHHHHHHhcCCCChhhcccCCCHHHHHHHHH
Confidence 669999999999877 6789999999999999999999999999887777777788999999999999999999999999
Q ss_pred HHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCC---Cccc-------------
Q psy6858 242 RACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIP---CTWH------------- 305 (592)
Q Consensus 242 ~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~---~~~~------------- 305 (592)
+++.++...++|+|++|+++.++.+.|+.+|+. |+ .|++|+|++++.++...+. +.|.
T Consensus 238 ~~i~la~~~g~~vhi~H~s~~~~~~~i~~ak~~----G~--~Vt~e~~p~~l~l~~~~~~~~~~~~~~~~g~~~d~~~~~ 311 (559)
T 2fty_A 238 RAITLATTMDTPILFVHVSSPQAAEVIKQAQTK----GL--KVYAETCPQYALLSDAITRCHHHGEVESYGVGIDLSSIS 311 (559)
T ss_dssp HHHHHHHHTTCCEEECSCCCHHHHHHHHHHHHT----TC--CEEEEECHHHHHCCGGGGSCC--------CCSCCGGGCS
T ss_pred HHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHc----CC--ceEEeecCcccccCHHHhhccccccccccccccCccccc
Confidence 999999999999999999999999999999998 99 9999999999998866551 0011
Q ss_pred -----------ccccceecCCCCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhh-------------hcCCCCCCcCC
Q psy6858 306 -----------DQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQK-------------ELGKDSFTHIP 361 (592)
Q Consensus 306 -----------~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~-------------~~g~~~f~~~p 361 (592)
.+..++++||+|. .+++++||++++.|+++++||||++++...+ ..+..+|..+|
T Consensus 312 ~~~~~~~~~~~~~~~~~~~PplR~-~~~~~~l~~~l~~G~~~~igTD~~p~~~~~k~~~~~k~~~~~~~~~~~~~f~~~~ 390 (559)
T 2fty_A 312 ESPFTNPDDRFIGSKYICSPPIRP-EGTQKSIWKGMNNGTFTIVGSDHCSYNYYEKTSTASKHRAFDPENNKNGEFRYIP 390 (559)
T ss_dssp SSTTTCTTCTTGGGGGCCSSCCCC-TTSHHHHHHHHHTTSCSEECCCBCCCBSSCCSSTTBGGGGEEGGGTEESCGGGSC
T ss_pred cccccccCccccccCcEECCCCCC-HHHHHHHHHHHhcCceEEEEeCCCCCChhhccccccccccccccccccCCHhhCC
Confidence 2456789999998 6899999999999999999999999887632 33446899999
Q ss_pred CCCcchhhHHHHHHHhhccCCCC-CHHHHHHHHhHhHHHHcCCCCCCccccCC-CCccEEEEeCCc--------eEEecC
Q psy6858 362 NGVNGVQDRLSVIWEKGVVPGIL-SPEKFVAVTSTNAAKIFNLYPKKGVIAEG-SDADIVVWNYKA--------KRTISA 431 (592)
Q Consensus 362 ~G~~g~e~~~~~~~~~~v~~~~l-~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G-~~ADlVv~d~~~--------~~~i~~ 431 (592)
+|++|+|.+++.+|++++..+.| +++++++++|.|||++||+++++|+|++| ++|||||||++. +++++.
T Consensus 391 ~G~~g~e~~l~~ll~~~v~~~~l~~~~~~~~~~t~~~A~~lgl~~~~G~i~~G~~~ADlvv~d~~~~~~~~~~~~~~~~~ 470 (559)
T 2fty_A 391 NGLPGVCTRMPLLYDYGYLRGNLTSMMKLVEIQCTNPAKVYGMYPQKGSILPGVSDADLVIWYPDDSKKEYNSKPKLITN 470 (559)
T ss_dssp CCBCCTTTHHHHHHHHTTTTTSSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTTSBCCEEEECCSSCCCCCTTSCSBCCT
T ss_pred CCCccHHHHHHHHHHHHHHcCCCCCHHHHHHHHhHHHHHHhCCCCCCceeeccCCcCCEEEEeCcccccccCCccEEEch
Confidence 99999999999999999988999 99999999999999999998899999999 999999999998 889999
Q ss_pred CcccccCCCCcccCeEEeeeeeEEEECCEEEEECCeeeecCCCceeecCCC
Q psy6858 432 KTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLPTHT 482 (592)
Q Consensus 432 ~~~~~~~~~~~~~g~~~~g~~~~Viv~GkvV~~~g~l~~~~g~g~~~~~~~ 482 (592)
+.+++...|+||+|+++.|+|..||++|++||++|+++...|.||||++++
T Consensus 471 ~~~~s~~~~sp~~g~~~~g~v~~t~v~G~~v~~~g~~~~~~~~G~~~~~~~ 521 (559)
T 2fty_A 471 KLMEHNCDYTPFEGIEIKNWPRYTIVKGKIVYKEGEILKENADGKYLKRGK 521 (559)
T ss_dssp GGGTSSCSCCTTTTCBCSCCEEEEEETTEEEEETTEECGGGCCCCBCCCCC
T ss_pred HHhcccCCCCCccCCEecceEEEEEECCEEEEECCeeccCCcCCeeecCCc
Confidence 999999999999999999999999999999999999999889999999976
No 6
>2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A
Probab=100.00 E-value=2.9e-65 Score=562.18 Aligned_cols=475 Identities=53% Similarity=0.934 Sum_probs=422.5
Q ss_pred cccEEEEccEEEcCCCceeeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccCCCCChhhHHHHH
Q psy6858 18 QNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGT 97 (592)
Q Consensus 18 ~~~llIkng~Iv~~d~~~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~~~~~d~~~~~~ 97 (592)
+++++|+|++|++++...+++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+..+..+..+.++++.++
T Consensus 25 ~~~~li~n~~v~~~~~~~~~~V~I~~grI~~Ig~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~e~~~~~~ 104 (501)
T 2vm8_A 25 SDRLLIKGGKIVNDDQSFYADIYMEDGLIKQIGENLIVPGGVKTIEAHSRMVIPGGIDVHTRFQMPDQGMTSADDFFQGT 104 (501)
T ss_dssp CCCEEEEEEEEECSSCEEEEEEEEETTEEEEEESSCCCCSSSCEEECTTCEEEECEEEEEECTTCEETTEECSSCHHHHH
T ss_pred cCCEEEEeeEEECCCCceEeeEEEECCEEEEeccCCCCCCCCeEEECCCCEEeeCEEEeeecccccccCCCcHHHHHHHH
Confidence 47899999999998776789999999999999987544456789999999999999999999987654445678899999
Q ss_pred HHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChHHHHHHHHHHHHcCCcEEEEEEeeCCC
Q psy6858 98 KAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGL 177 (592)
Q Consensus 98 ~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~Gv~~~k~~~~~~~~ 177 (592)
+.++++||||++|+..+.+...+.++++.+.........+++++|..++.+.....+++.+++++.|+..++.++.++..
T Consensus 105 ~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~l~~~~G~~~i~~~~~~~~~ 184 (501)
T 2vm8_A 105 KAALAGGTTMIIDHVVPEPGTSLLAAFDQWREWADSKSCCDYSLHVDISEWHKGIQEEMEALVKDHGVNSFLVYMAFKDR 184 (501)
T ss_dssp HHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHHHHCSSEEEEEEECCSCSHHHHHHHHHHHHHSCCCEEEEESSSTTT
T ss_pred HHHHhCCcEEEEeCCCCCCCCChHHHHHHHHHHHhcCCeeEEEEEEEecCCCcccHHHHHHHHHhCCceEEEEeeccCCC
Confidence 99999999999998765555566677777666554445678888888877777777888888876799999999887766
Q ss_pred cCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEE
Q psy6858 178 YMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVV 257 (592)
Q Consensus 178 ~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~ 257 (592)
..++.+++.++++.|++++.++.+|+++...+.+....+.+.|+..+++|..++|++.+.+++.+++.++...++|+|+.
T Consensus 185 ~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~g~~~hi~ 264 (501)
T 2vm8_A 185 FQLTDCQIYEVLSVIRDIGAIAQVHAENGDIIAEEQQRILDLGITGPEGHVLSRPEEVEAEAVNRAITIANQTNCPLYIT 264 (501)
T ss_dssp TBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHTTTCCSTHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCCHHHHHHHHHHHHHhCCEEEEEccChHHHHHHHHHHHhcCCCChhhccccCCHHHHHHHHHHHHHHHHHhCCcEEEE
Confidence 67899999999999999999999999988777777888899999999999999999999999999999999999999999
Q ss_pred ecccHHHHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCc-ccccccceecCCCCCCCCCHHHHHHHHhcCCce
Q psy6858 258 HIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCT-WHDQAAHVLSPPLRPDETTPTHLLTLLNENALQ 336 (592)
Q Consensus 258 hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~-~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~ 336 (592)
|+++.+..+.|+.+++. |+ .++++++++++.+++.++... |.....+.++||+|......+.+|+++..|+.+
T Consensus 265 h~~~~~~~~~i~~~~~~----G~--~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~pp~r~~~~~~~~l~~~l~~G~~~ 338 (501)
T 2vm8_A 265 KVMSKSSAEVIAQARKK----GT--VVYGEPITASLGTDGSHYWSKNWAKAAAFVTSPPLSPDPTTPDFLNSLLSCGDLQ 338 (501)
T ss_dssp EECCHHHHHHHHHHHHT----TC--CEEEEEBHHHHHCCGGGGGCSSHHHHHHTCCSSCCCSCTTHHHHHHHHHHHTSSC
T ss_pred eCCcHHHHHHHHHHHhC----CC--cEEEEEChhHhhcChhhhcccccccCceEEECCCCCCCcchHHHHHHHHhcCceE
Confidence 99999989999999988 99 888999999999999887654 444445668899996446789999999999999
Q ss_pred EEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCc
Q psy6858 337 TTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDA 416 (592)
Q Consensus 337 ~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~A 416 (592)
++|||+++++..++..+.++|...|.|+.|.+.+|..+|.+++..+++++.++++++|.|||++||+++++|+|++|++|
T Consensus 339 ~~gtD~~~~~~~~~~~~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~l~~~T~~~A~~lgl~~~~G~l~~G~~A 418 (501)
T 2vm8_A 339 VTGSAHCTFNTAQKAVGKDNFTLIPEGTNGTEERMSVIWDKAVVTGKMDENQFVAVTSTNAAKVFNLYPRKGRIAVGSDA 418 (501)
T ss_dssp CCBCCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHHTCTTTSSCCCTTSBC
T ss_pred EEEecCCCCChhhhhcccCChhhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHhHhHHHHhCCCCCCCccCCCCcC
Confidence 99999999998888888888999999999999999999988888889999999999999999999998889999999999
Q ss_pred cEEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEECCEEEEECCeeeecCCCceeecCCCCCCccccCCCcccc
Q psy6858 417 DIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLPTHTNPPFVYEGQTPEVD 496 (592)
Q Consensus 417 DlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv~GkvV~~~g~l~~~~g~g~~~~~~~~~~~~~~~~~~~~~ 496 (592)
||||||++..+.++...+.+...|+||+++...|.|..||++|++||++|+++...+.||+|++++|++|+|.++++|++
T Consensus 419 Dlvv~d~~~~~~~~~~~~~s~~~~~~~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~ 498 (501)
T 2vm8_A 419 DLVIWDPDSVKTISAKTHNSSLEYNIFEGMECRGSPLVVISQGKIVLEDGTLHVTEGSGRYIPRKPFPDFVYKRIKARSR 498 (501)
T ss_dssp CEEEEEEEEEEECCTTTSSSSCSCCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTCCCBCCCCSSCHHHHHHHHHHHH
T ss_pred CEEEEcCCCCeeeccccccccccCCCccCcEeCceEEEEEECCEEEEECCeEccCCCCCceecCCCCCchHHHHHHHHhh
Confidence 99999999889999989999999999999999999999999999999999998778899999999999999999999998
Q ss_pred cc
Q psy6858 497 ID 498 (592)
Q Consensus 497 ~~ 498 (592)
+.
T Consensus 499 ~~ 500 (501)
T 2vm8_A 499 LA 500 (501)
T ss_dssp SC
T ss_pred cc
Confidence 64
No 7
>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A*
Probab=100.00 E-value=3.8e-63 Score=538.34 Aligned_cols=455 Identities=39% Similarity=0.665 Sum_probs=404.5
Q ss_pred cEEEEccEEEcCCCceeeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccCCCCChhhHHHHHHH
Q psy6858 20 RLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGTKA 99 (592)
Q Consensus 20 ~llIkng~Iv~~d~~~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~~~~~d~~~~~~~~ 99 (592)
+++|+|++|++++...+++|+|+||+|++|++....+.+.++||++|++|||||||+|+|+.+++.+....++++.+++.
T Consensus 1 ~~li~n~~vv~~~~~~~~~v~I~~g~I~~ig~~~~~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~ 80 (458)
T 1gkp_A 1 PLLIKNGEIITADSRYKADIYAEGETITRIGQNLEAPPGTEVIDATGKYVFPGFIDPHVHIYLPFMATFAKDTHETGSKA 80 (458)
T ss_dssp CEEEESCEEEETTEEEECEEEESSSBCCEEESCCCCCTTCEEEECTTSEEEECEEEEEECSSCEETTEECSCCHHHHHHH
T ss_pred CEEEEeeEEECCCCceEeeEEEECCEEEEecCCCCCCCCCeEEECCCCEEecCEEecccCCCcCCCCCcCHhHHHHHHHH
Confidence 47899999999887678999999999999998654344678999999999999999999998775554567889999999
Q ss_pred HHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChHHHHHHHHHHHHcCCcEEEEEEeeCCCcC
Q psy6858 100 AVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYM 179 (592)
Q Consensus 100 ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~Gv~~~k~~~~~~~~~~ 179 (592)
++++||||++|+....+...+.++++.+......+..+++++|...+.+.++..++++++++ .|+..+++++.+++.+.
T Consensus 81 ~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~ 159 (458)
T 1gkp_A 81 ALMGGTTTYIEMCCPSRNDDALEGYQLWKSKAEGNSYCDYTFHMAVSKFDEKTEGQLREIVA-DGISSFKIFLSYKNFFG 159 (458)
T ss_dssp HHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECCCCCTTHHHHHHHHHH-TTCCEEEEEECSTTTTB
T ss_pred HHhCCccEEEeCCCCCCCCCHHHHHHHHHHHhccCceeeEEEEEeecCCchhhHHHHHHHHH-hCCCEEEEEeccCCCcC
Confidence 99999999999876545567778888776665556777888888777777777888888875 49999999999887778
Q ss_pred CCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEec
Q psy6858 180 LSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHI 259 (592)
Q Consensus 180 ~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv 259 (592)
++++++.++++.|++++.++++|+|+...+....+.+.+.|...+++|...+|.+.|.+++.+++.++...+++++++|+
T Consensus 160 ~~~~~l~~~~~~a~~~~~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~H~ 239 (458)
T 1gkp_A 160 VDDGEMYQTLRLAKELGVIVTAHCENAELVGRLQQKLLSEGKTGPEWHEPSRPEAVEAEGTARFATFLETTGATGYVVHL 239 (458)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHTTCCSGGGTTTTSCHHHHHHHHHHHHHHHHHHTCEEEECSC
T ss_pred CCHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHhcCCCChhhccCcCCHHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 89999999999999999999999998877777777788999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCc-ccccccceecCCCCCCCCCHHHHHHHHhcCCceEE
Q psy6858 260 MSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCT-WHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTT 338 (592)
Q Consensus 260 ~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~-~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~ 338 (592)
++.+..+.|+.+++. |+ .|++|+|++++.++.+.+... | ....+.+.||+|. ..+.+++|++++.|+.+++
T Consensus 240 ~~~~~~~~i~~~~~~----G~--~v~~~~~p~~~~~~~~~~~~~~~-~g~~~~~~~p~r~-~~~~~~l~~~~~~G~~~~~ 311 (458)
T 1gkp_A 240 SCKPALDAAMAAKAR----GV--PIYIESVIPHFLLDKTYAERGGV-EAMKYIMSPPLRD-KRNQKVLWDALAQGFIDTV 311 (458)
T ss_dssp CSHHHHHHHHHHHHT----TC--CEEEEEEHHHHHCCGGGGGSCHH-HHHTTCCSSCCCC-THHHHHHHHHHHTTSSCEE
T ss_pred CCHHHHHHHHHHHHc----CC--eEEEEecccceeeCHHHhccccc-CCcceEEeCCCCC-HHHHHHHHHHHhcCCeeEE
Confidence 999989999999998 99 999999999988887665332 3 2334557899997 6778899999999999999
Q ss_pred eCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccE
Q psy6858 339 GSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADI 418 (592)
Q Consensus 339 gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADl 418 (592)
||||++++..++..+.++|...|.|++|++.+|+.++++++..+.|++.++++++|.|||++||+++++|+|++|++|||
T Consensus 312 gtD~~~~~~~~k~~~~~~~~~~~~g~~g~~~~l~~~~~~~~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~ADl 391 (458)
T 1gkp_A 312 GTDHCPFDTEQKLLGKEAFTAIPNGIPAIEDRVNLLYTYGVSRGRLDIHRFVDAASTKAAKLFGLFPRKGTIAVGSDADL 391 (458)
T ss_dssp ECCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTSSSCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCE
T ss_pred ECCCCCCCHHHhhcccCChhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHhhCHHHHhCCCCCCCcCCCCCcCCE
Confidence 99999999888887778999999999999999999999888888899999999999999999999888999999999999
Q ss_pred EEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEECCEEEEECCeeeecCCCceeecCCCC
Q psy6858 419 VVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLPTHTN 483 (592)
Q Consensus 419 Vv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv~GkvV~~~g~l~~~~g~g~~~~~~~~ 483 (592)
||||++..++++.++.++...++||+|+.+.|.|..||++|++||++|+++...+.||||++++|
T Consensus 392 vv~d~~~~~~~~~~~~~~~~~~~p~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~~~~ 456 (458)
T 1gkp_A 392 VVYDPQYRGTISVKTQHVNNDYNGFEGFEIDGRPSVVTVRGKVAVRDGQFVGEKGWGKLLRREPM 456 (458)
T ss_dssp EEEETTCCEECCGGGCCSSSSCCTTTTCEESCEEEEEEETTEEEEETTEECCCTTCCCBCCCCCC
T ss_pred EEEeCCCCeEEchHHcccccCCCccCCCEEeeEEEEEEECCEEEEECCeeccCCCCceeccCcCC
Confidence 99999999999999999999999999999999999999999999999999888878999999887
No 8
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}
Probab=100.00 E-value=1.6e-62 Score=536.06 Aligned_cols=441 Identities=26% Similarity=0.334 Sum_probs=386.3
Q ss_pred cccEEEEccEEEcCCCceeeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccCCCCChhhHHHHH
Q psy6858 18 QNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGT 97 (592)
Q Consensus 18 ~~~llIkng~Iv~~d~~~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~~~~~d~~~~~~ 97 (592)
+++++|+|++|++++....++|+|+||+|++|++.... ..++||++|++|+|||||+|+|+..+. ....+++.+++
T Consensus 22 ~~~~~i~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~--~~~~id~~g~~v~PG~iD~H~H~~~~g--~~~~~~~~~~~ 97 (473)
T 3e74_A 22 SFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGD--AKEVMDASGLVVSPGMVDAHTHISEPG--RSHWEGYETGT 97 (473)
T ss_dssp CEEEEEESCEEECSSCEEECEEEEETTEEEEEESCCCC--EEEEEECTTCEEEECEEEEEECC-----------CHHHHH
T ss_pred cCCEEEEeeEEECCCCceeeeEEEECCEEEEEcCCCCC--CCcEEECCCCEEecCEEEEecccCCCC--CCcHHHHHHHH
Confidence 46899999999999887789999999999999986543 368999999999999999999997763 35678899999
Q ss_pred HHHHcCCeeEEeccc-cCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChHHHHHHHHHHHHcCCcEEEEEEeeC-
Q psy6858 98 KAAVAGGTTTIIDFA-LPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYK- 175 (592)
Q Consensus 98 ~~ala~GtTti~d~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~Gv~~~k~~~~~~- 175 (592)
++++++||||++|+. ...+.....+.++.+...+..+..++|+++..++... .+++.++.+ .|+..||+|+.+.
T Consensus 98 ~~~~~~G~Tt~~~~~~~t~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~~~~~~---~~~l~~l~~-~G~~~~K~~~~~~~ 173 (473)
T 3e74_A 98 RAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYN---IDRLHELDE-VGVVGFKCFVATCG 173 (473)
T ss_dssp HHHHHTTEEEEEECCSSSSSCSCSHHHHHHHHHHHTTTCSSEEEECEECCTTC---TTTHHHHHH-HTCSCEEEEC----
T ss_pred HHHHhCCEEEEEcCcccCCCCcccHHHHHHHHHHhccCCeEEEEEEeecccch---HHHHHHHHH-cCCCEEEEeccccC
Confidence 999999999999997 5555556677777777777777889999988776544 456666665 4999999999853
Q ss_pred ------CCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcc
Q psy6858 176 ------GLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQ 249 (592)
Q Consensus 176 ------~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~ 249 (592)
+.+.++++.++++++.++++|.++.+|+++..++..........|...++.|..++|...|.+++.+.+.++++
T Consensus 174 ~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~l~la~~ 253 (473)
T 3e74_A 174 DRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKV 253 (473)
T ss_dssp --------CCCCHHHHHHHHHHHHHHTCCEEEECSCHHHHHHHHHHHHHHTCCSHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred CcccccccCCCCHHHHHHHHHHHHhcCCeEEEEecCHHHHHHHhhHHHhcCCcChhhcccCCCHHHHHHHHHHHHHHHHH
Confidence 44567899999999999999999999999988877777788899999999999999999999999999999999
Q ss_pred cCCCEEEEecccHHHHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHH
Q psy6858 250 VDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTL 329 (592)
Q Consensus 250 ~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~ 329 (592)
.++++|++|+++.++.+.|+.+|++ |+ .|++|++++++.++...+.. ....++++||+|. ..++++||++
T Consensus 254 ~g~~lhi~Hvst~~~l~li~~ak~~----G~--~vt~e~~ph~l~l~~~~~~~---~~~~~~~~Pplr~-~~~~~~L~~~ 323 (473)
T 3e74_A 254 AGCRLHVCHVSSPEGVEEVTRARQE----GQ--DITCESCPHYFVLDTDQFEE---IGTLAKCSPPIRD-LENQKGMWEK 323 (473)
T ss_dssp HTCCEEECSCCSHHHHHHHHHHHHT----TC--CEEEEECTHHHHCCHHHHHH---HCGGGCCSSCCCC-HHHHHHHHHH
T ss_pred hCCcEEEEeCCCHHHHHHHHHHHHc----CC--CeEEEEchHhhhcCHHHHhC---CCCcEEEeCCCCC-HHHHHHHHHH
Confidence 9999999999999999999999999 99 99999999999998876542 2456789999997 7888999999
Q ss_pred HhcCCceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCcc
Q psy6858 330 LNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGV 409 (592)
Q Consensus 330 l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~ 409 (592)
++.|.+++++|||++++...|. .+|..+|+|++|+|.+++.+|++++..+++++.++++++|.|||++||++ ++|+
T Consensus 324 l~~G~~~~i~tDh~p~~~~~k~---~~f~~~~~G~~g~e~~l~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~~-~~G~ 399 (473)
T 3e74_A 324 LFNGEIDCLVSDHSPCPPEMKA---GNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQ-QKGR 399 (473)
T ss_dssp HHTTCCCEECCCBCCCCTTTTC---SCTTTSCCCBCCGGGHHHHHHHHHTTTTCCCHHHHHHHHTHHHHHHTTCT-TSSC
T ss_pred HhCCCCcEEEeCCCCCCHHHcc---cChhhcCCCcccHHhHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCC-CCCc
Confidence 9999999999999999988774 48999999999999999999998999999999999999999999999996 6899
Q ss_pred ccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEECCEEEEE-CCeeeecCCCceeecCC
Q psy6858 410 IAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVD-EGNLRVAQGQGNYLPTH 481 (592)
Q Consensus 410 I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv~GkvV~~-~g~l~~~~g~g~~~~~~ 481 (592)
|++|++|||||||++..++++.+.+++...++||+|+++.|+|..||++|++||+ ||++... +.||||+|.
T Consensus 400 l~~G~~AD~vv~d~~~~~~~~~~~~~~~~~~sp~~g~~~~g~v~~t~v~G~~v~~~~g~~~~~-~~G~~~~~~ 471 (473)
T 3e74_A 400 IAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVA-PKGQFILKH 471 (473)
T ss_dssp CSTTSBCCEEEEESSCCEECCGGGCCSSSCCCTTTTCEESCEEEEEEETTEEEEETTTBCCSC-CCCCEECCC
T ss_pred cCCCCccCEEEEeCCCCEEECHHHccccCCCCCCCCCEEeeEEEEEEECCEEEEecCCeEccC-CCceeecCC
Confidence 9999999999999999999999999999999999999999999999999999999 9999765 799999874
No 9
>1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=1.8e-59 Score=509.46 Aligned_cols=454 Identities=37% Similarity=0.613 Sum_probs=391.6
Q ss_pred ccEEEEccEEEcCCCceeeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccCCCCChhhHHHHHH
Q psy6858 19 NRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGTK 98 (592)
Q Consensus 19 ~~llIkng~Iv~~d~~~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~~~~~d~~~~~~~ 98 (592)
|+++|+|++|++++....++|+|+||+|++|++... .+.++||++|++|||||||+|+|+.+........++++.+++
T Consensus 1 ~~~li~n~~v~~~~~~~~~~v~I~~g~I~~ig~~~~--~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~e~~~~~~~ 78 (457)
T 1nfg_A 1 MDIIIKNGTIVTADGISRADLGIKDGKITQIGGALG--PAERTIDAAGRYVFPGGIDVHTHVETVSFNTQSADTFATATV 78 (457)
T ss_dssp CCEEEEEEEEEETTEEEEEEEEEETTEEEEESSCCC--CCSEEEECTTCEEEECEEEEEECCSCEETTEECSCCHHHHHH
T ss_pred CcEEEEeeEEEeCCCceeeeEEEECCEEEEecCCCC--CCCeEEeCCCCEEccceEeeccccccCcCCCCChhhHHHHHH
Confidence 478999999999887678999999999999997643 357899999999999999999999754433336788999999
Q ss_pred HHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChHHHHHHHHHHHHcCCcEEEEEEeeCCCc
Q psy6858 99 AAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLY 178 (592)
Q Consensus 99 ~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~Gv~~~k~~~~~~~~~ 178 (592)
.++++||||++|+....+.....++++.+.........+++++|...+.++++..+++.++. +.|+..+|.++.+....
T Consensus 79 ~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~~~~k~~~~~~~~~ 157 (457)
T 1nfg_A 79 AAACGGTTTIVDFCQQDRGHSLAEAVAKWDGMAGGKSAIDYGYHIIVLDPTDSVIEELEVLP-DLGITSFKVFMAYRGMN 157 (457)
T ss_dssp HHHHTTEEEEEEEEECCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECSSCCHHHHHHTTTGG-GGTCCEEEEESSSTTTT
T ss_pred HHHhCCcEEEEeCCCCCCCCChHHHHHHHHHHhcccCccCEEEEEeecCCchhHHHHHHHHH-HcCCCEEEEeeccCCCC
Confidence 99999999999987654555677777777666666677889999988888877666666654 46999999998865434
Q ss_pred CCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEe
Q psy6858 179 MLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVH 258 (592)
Q Consensus 179 ~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~h 258 (592)
..+++++.++++.+++.+.++.+|+++...+.....++.+.|...+..|...+|...+.+.+.+++.++++.++++|++|
T Consensus 158 ~~~~~~~~~~~~~a~~~~~~v~~H~e~~~~~~~~~~~~~~~g~~~~~~h~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~H 237 (457)
T 1nfg_A 158 MIDDVTLLKTLDKAVKTGSLVMVHAENGDAADYLRDKFVAEGKTAPIYHALSRPPRVEAEATARALALAEIVNAPIYIVH 237 (457)
T ss_dssp BCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEECC
T ss_pred CCCHHHHHHHHHHHHhcCCEEEEeCCCHHHHHHHHHHHHhcCCcchhhccccCCHHHHHHHHHHHHHHHHHHCCCEEEEe
Confidence 56888999999999999999999999987777777777889988888888889999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCc-ccccccceecCCCCCCCCCHHHHHHHHhcCCceE
Q psy6858 259 IMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCT-WHDQAAHVLSPPLRPDETTPTHLLTLLNENALQT 337 (592)
Q Consensus 259 v~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~-~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~ 337 (592)
+++....+.+..+|+. |+ .++++++++++.++...+... | ....+.++||+|. ......++++++.|+.++
T Consensus 238 ~~~~~~~~~~~~~~~~----G~--~v~~~~~~h~~~~~~~~~~~~~~-~~~~~~~~p~~r~-~~~~~~~~~~~~~G~~~~ 309 (457)
T 1nfg_A 238 VTCEESLEEVMRAKSR----GV--RALAETCTHYLYLTKEDLERPDF-EGAKYVFTPPARA-KKDHDVLWNALRNGVFET 309 (457)
T ss_dssp CCSHHHHHHHHHHHHH----TC--CEEECEEGGGGTCCGGGGGCTTT-GGGGGCCSSCCCC-HHHHHHHHHHHHTTCCSC
T ss_pred CCcHHHHHHHHHHHHc----CC--eEEEEEchHHhEeCHHHhccccc-cCceeEEcCCCCC-HHHHHHHHHHHhCCCeEE
Confidence 9998888999988888 99 899999999888776655432 2 3445678899886 566788999999999999
Q ss_pred EeCCCCCCChh-hhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCc
Q psy6858 338 TGSDNCTFNKN-QKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDA 416 (592)
Q Consensus 338 ~gsD~~~~~~~-~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~A 416 (592)
+|||+++++.. .+..+.++|..+|.|++|.+.++..++ +++..+++++.++++++|.|||++||+++++|+|++|++|
T Consensus 310 ~gtD~~~~~~~~~k~~~~~~~~~~~~g~~g~e~~~~~~~-~~~~~~~l~~~~~l~~~T~~~A~~lgl~~~~G~i~~G~~A 388 (457)
T 1nfg_A 310 VSSDHCSWLFKGHKDRGRNDFRAIPNGAPGVEERLMMVY-QGVNEGRISLTQFVELVATRPAKVFGMFPQKGTIAVGSDA 388 (457)
T ss_dssp EECCBCCCCTTTTTTTTTTCGGGSCCCBCCTTTHHHHHH-HHHHTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCSTTSBC
T ss_pred EecCCCCCChHHhhhcccCCHhHCCCCcccHHHHHHHHH-HHHHcCCCCHHHHHHHHhhhHHHHhCCCCCCcCcCCCCcc
Confidence 99999988765 555555789999999999999999888 6777788999999999999999999998789999999999
Q ss_pred cEEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEECCEEEEECCeeeecCCCceeecCCCCC
Q psy6858 417 DIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLPTHTNP 484 (592)
Q Consensus 417 DlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv~GkvV~~~g~l~~~~g~g~~~~~~~~~ 484 (592)
||||||++..+.++..++.+...|+||+|+...+.|..||++|++||++|+++...+.||||++++|+
T Consensus 389 Dlvv~d~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~~~~~ 456 (457)
T 1nfg_A 389 DIVLWDPEAEMVIEQTAMHNAMDYSSYEGHKVKGVPKTVLLRGKVIVDEGSYVGEPTDGKFLKRRKYK 456 (457)
T ss_dssp CEEEEEEEEEEECCGGGSCSSCSCCTTTTCEEEEEEEEEEETTEEEEETTEECCCTTSCCBCCCCSCC
T ss_pred CEEEEeCCCCEEecHHHccCCCCCCCccCCEecceEEEEEECCEEEEECCccccCCCCCeeeCCCCCC
Confidence 99999999888899889999999999999999999999999999999999999888889999998874
No 10
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=100.00 E-value=3.5e-59 Score=506.66 Aligned_cols=431 Identities=25% Similarity=0.325 Sum_probs=382.1
Q ss_pred cccEEEEccEEEcCCCceeeEEEEECCEEEEeec--CCCCCCCCeEEecCCCEEeeCccccCcCcccccCCCCChhhHHH
Q psy6858 18 QNRLLIKNGKVVNADKISDLDIYIENGVIQQLGR--NLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYH 95 (592)
Q Consensus 18 ~~~llIkng~Iv~~d~~~~~dV~I~dG~I~~Ig~--~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~~~~~d~~~~ 95 (592)
+|+++|+|++|++++....++|+|+||+|++|++ ... +.+.++||++|++|+|||||+|+|+..+. ....+++..
T Consensus 5 ~~~~~i~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~~-~~~~~~id~~g~~v~PG~ID~H~H~~~~~--~~~~~~~~~ 81 (448)
T 3hm7_A 5 RFDLIIRSSTVVTETTTYRADVAIRNGIVSAITEPGSIS-SDDGPAIDGTGLHLFPGMVDVHVHFNEPG--RTEWEGFAS 81 (448)
T ss_dssp CCSEEEEEEEEECSSCEEEEEEEEETTEEEEEESTTCSC-TTSSCEEECTTCEEEECEEEEEECCCTTT--SGGGCCSHH
T ss_pred cccEEEEeeEEECCCCceEeEEEEECCEEEEeeCccCCC-CCCCeEEECCCCEEecCEEEeeeccCCCC--CCcHhHHHH
Confidence 5799999999999887788999999999999998 443 34678999999999999999999998763 334567888
Q ss_pred HHHHHHcCCeeEEeccc-cCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChHHHHHHHHHHHHcCCcEEEEEEee
Q psy6858 96 GTKAAVAGGTTTIIDFA-LPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAY 174 (592)
Q Consensus 96 ~~~~ala~GtTti~d~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~Gv~~~k~~~~~ 174 (592)
.+++++++||||++++. ...+.....+.+..+...+.....+++.++...+... .+++.++.+ .|+.+|+.++.|
T Consensus 82 ~~~~~~~~Gvtt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~l~~-~g~~~~~~~l~~ 157 (448)
T 3hm7_A 82 GSKSLAAGGVTTYFDMPLNSNPPTITREELDKKRQLANEKSLVDYRFWGGLVPGN---IDHLQDLHD-GGVIGFKAFMSE 157 (448)
T ss_dssp HHHHHHTTTEEEEEECSSSSSSCSCSHHHHHHHHTHHHHHCSSEEEEEEECCTTC---GGGHHHHHH-TTCSEEEEESSS
T ss_pred HHHHHHhCCEEEEEeCCCCCCCCCChHHHHHHHHHHhccCCeeEEEEEEEecccC---HHHHHHHHH-cCCCEEEEeecc
Confidence 99999999999999987 5555545566777766666555677888887776544 456666665 699999999987
Q ss_pred CCC---cCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccC
Q psy6858 175 KGL---YMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVD 251 (592)
Q Consensus 175 ~~~---~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~ 251 (592)
... ...++++|+++++.|+++|+++.+|+++...+....+.+...|...+..+..++|...|.+++.+++.++++.+
T Consensus 158 ~~~~~~~~~~~~~l~~~l~~a~~~g~~v~vH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~~~la~~~g 237 (448)
T 3hm7_A 158 CGTDDFQFSHDETLLKGMKKIAALGSILAVHAESNEMVNALTTIAIEEQRLTVKDYSEARPIVSELEAVERILRFAQLTC 237 (448)
T ss_dssp CSSSSSCCCCHHHHHHHHHHHHHHTCCEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCccCcCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCcChhhccccCCHHHHHHHHHHHHHHHHHhC
Confidence 543 35689999999999999999999999999888887888899999999999999999999999999999999999
Q ss_pred CCEEEEecccHHHHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHh
Q psy6858 252 CPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLN 331 (592)
Q Consensus 252 ~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~ 331 (592)
+++|+.|+++.+..+.++.++++ |+ .|++|++++++.++...+.. ....++++||+|. ..+.++||+++.
T Consensus 238 ~~~~i~H~s~~~~~~~i~~ak~~----G~--~v~~e~~ph~l~l~~~~~~~---~~~~~~~~Pplr~-~~~~~~l~~~l~ 307 (448)
T 3hm7_A 238 CPIHICHVSSRKVLKRIKQAKGE----GV--NVSVETCPHYLLFSLDEFAE---IGYLAKCAPPLRE-RQEVEDLWDGLM 307 (448)
T ss_dssp CCEEECCCCCHHHHHHHHHHHHT----TC--CEEEEECHHHHHCCHHHHHH---HCSTTCCSSCCCC-HHHHHHHHHHHH
T ss_pred CCEEEEeCCCHHHHHHHHHHHhc----CC--CEEEEechHHHccCHHHhcC---CCCeEEEcCCCCC-HHHHHHHHHHHh
Confidence 99999999999999999999999 99 99999999999988766532 2557789999998 678899999999
Q ss_pred cCCceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCcccc
Q psy6858 332 ENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIA 411 (592)
Q Consensus 332 ~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~ 411 (592)
.|..++++|||+|++...+..+ +|..+|+|++|+|.+++.+|++++..++++++++++++|.|||++||+++++|+|+
T Consensus 308 ~g~~~~i~tD~~p~~~~~k~~~--~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~~~~~t~~~A~~~g~~~~~g~l~ 385 (448)
T 3hm7_A 308 AGEIDLISSDHSPSLPQMKTGK--TIFEVWGGIAGCQNTLAVMLTEGYHKRKMPLTQIVQLLSTEPAKRFGLYPQKGTIQ 385 (448)
T ss_dssp HTCCCEECCCBCCCCGGGGCCS--STTTSCCCBCCTTTHHHHHHHHTTTTTCCCHHHHHHHHTHHHHHHHTCTTTSSCCS
T ss_pred cCCccEEEeCCCCCCHHHcccC--CHhhCCCCCccHHHHHHHHHHHHHhcCCcCHHHHHHHHhHHHHHHcCCCCCCCccc
Confidence 9999999999999999888654 69999999999999999999989989999999999999999999999999999999
Q ss_pred CCCCccEEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEECCEEEEECCe
Q psy6858 412 EGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGN 467 (592)
Q Consensus 412 ~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv~GkvV~~~g~ 467 (592)
+|++|||||||++.+++++.+.+++...|+||+|+++.|+|..||++|++||++|+
T Consensus 386 ~G~~Ad~~~~d~~~~~~~~~~~~~~~~~~sp~~g~~~~g~v~~t~~~G~~v~~~~~ 441 (448)
T 3hm7_A 386 VGAEASFTLIDLNESYTLNASDLYYRHPISPYVGQRFRGKVKHTICQGKHVYQDHE 441 (448)
T ss_dssp TTSBCCEEEEEEEEEEECCGGGCCSSSCCCTTTTCEEEEEEEEEEETTEEEEECC-
T ss_pred CCCcCCEEEEeCCCCEEEChHhcccccCCCCCCCCEEEEEEEEEEECCEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999985
No 11
>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.8e-58 Score=495.13 Aligned_cols=422 Identities=22% Similarity=0.351 Sum_probs=356.8
Q ss_pred EEEEccEEEcCCCceeeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccCCCCChhhHHHHHHHH
Q psy6858 21 LLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGTKAA 100 (592)
Q Consensus 21 llIkng~Iv~~d~~~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~~~~~d~~~~~~~~a 100 (592)
++|+|++|++.+....++|+|+||+|++|++....+.+.++||++|++|+|||||+|+|+..+. ....++++.+++++
T Consensus 2 ~~i~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~~~~~~~id~~g~~v~PG~iD~H~H~~~~g--~~~~~~~~~~~~~~ 79 (424)
T 3gri_A 2 KLIKNGKVLQNGELQQADILIDGKVIKQIAPAIEPSNGVDIIDAKGHFVSPGFVDVHVHLREPG--GEYKETIETGTKAA 79 (424)
T ss_dssp EEEESCEEEETTEEEECEEEEETTEEEEEESCCCCCSSCEEEECTTCEEEECEEEEEECCCTTT--CTTTCCHHHHHHHH
T ss_pred EEEEeeEEEcCCCceeeeEEEECCEEEEecCCCCCCCCCeEEECCCCEEEeCeEEeeecCCCCC--CCCHHHHHHHHHHH
Confidence 7999999999555568999999999999998766455789999999999999999999997653 35678899999999
Q ss_pred HcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCC-ChHHHHHHHHHHHHcCCcEEEEEEeeCCCcC
Q psy6858 101 VAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWW-SDQVQQEMAELCEKHGVNSFKTFMAYKGLYM 179 (592)
Q Consensus 101 la~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~lv~~~Gv~~~k~~~~~~~~~~ 179 (592)
+++||||++++....+.....+.++.+.+.+.....+++..+..+... ..+..+++.++.+ .|+.+| .+++.+.
T Consensus 80 ~~~G~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~-~G~~~~----~~~~~~~ 154 (424)
T 3gri_A 80 ARGGFTTVCPMPNTRPVPDSVEHFEALQKLIDDNAQVRVLPYASITTRQLGKELVDFPALVK-EGAFAF----TDDGVGV 154 (424)
T ss_dssp HHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEECCCEESBGGGCSSSBCCHHHHHT-TTCCCE----EECSSCC
T ss_pred HhCCEEEEeECcCCCCCCChHHHHHHHHHHhccCCCceEEEEEEEecCCCcchHHHHHHHHh-cCcEEE----ecCCcCc
Confidence 999999999998766655566666666666555455666665554322 2233445666664 477666 3456677
Q ss_pred CCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEec
Q psy6858 180 LSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHI 259 (592)
Q Consensus 180 ~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv 259 (592)
++++.++++++.++++|.++++|+++...+... ....|....+.+..++|...|.+++.+.+.++++.++++|+.|+
T Consensus 155 ~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~---~~~~g~~~~~~~~~~~p~~~E~~~v~r~~~la~~~g~~~~i~H~ 231 (424)
T 3gri_A 155 QTASMMYEGMIEAAKVNKAIVAHCEDNSLIYGG---AMHEGKRSKELGIPGIPNICESVQIARDVLLAEAAGCHYHVCHV 231 (424)
T ss_dssp CSHHHHHHHHHHHHHHTCCEEECCCCGGGCTTC---CEESSHHHHHHTCCEECTHHHHHHHHHHHHHHHHHTCCEEECSC
T ss_pred CCHHHHHHHHHHHHhcCCEEEEeCCCHHHHhhh---hhhcCccchhhCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeC
Confidence 899999999999999999999999987654311 01111122233455689999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCCceEEe
Q psy6858 260 MSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTG 339 (592)
Q Consensus 260 ~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~g 339 (592)
++.+..+.|+.+|+. |+ .|++|++++++.++...+.. ....++++||+|. ..++++||+++..|..++++
T Consensus 232 s~~~~~~~i~~ak~~----G~--~v~~e~~ph~l~l~~~~~~~---~~~~~~~~Pplr~-~~~~~~L~~~l~~G~i~~ig 301 (424)
T 3gri_A 232 STKESVRVIRDAKRA----GI--HVTAEVTPHHLLLTEDDIPG---NNAIYKMNPPLRS-TEDREALLEGLLDGTIDCIA 301 (424)
T ss_dssp CCHHHHHHHHHHHHT----TC--CEEEEECHHHHHCCGGGCCS---SCGGGCCSSCCCC-HHHHHHHHHHHHTTSSCEEC
T ss_pred CCHHHHHHHHHHHHc----CC--CEEEEecHHHHhcCHHHHhC---cCceEEEeCCCCC-HHHHHHHHHHHhcCCceEEE
Confidence 999999999999999 99 99999999999998887753 2557789999998 67889999999999999999
Q ss_pred CCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEE
Q psy6858 340 SDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIV 419 (592)
Q Consensus 340 sD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlV 419 (592)
|||+|++...|.. +|...|+|+.|++.+++.+|++++..+++++.++++++|.|||++||+ ++|+|++|++||||
T Consensus 302 tDhap~~~~~k~~---~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~--~~g~l~~G~~Ad~~ 376 (424)
T 3gri_A 302 TDHAPHARDEKAQ---PMEKAPFGIVGSETAFPLLYTHFVKNGDWTLQQLVDYLTIKPCETFNL--EYGTLKENGYADLT 376 (424)
T ss_dssp CCBCCCCHHHHTS---CTTTSCCCCCCTTTHHHHHHHHHTTTSSCCHHHHHHHHTHHHHHHTTC--SCSCCCTTSBCCEE
T ss_pred cCCCCCCHHHccC---CHhHCCCCCccccccHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCC--CCCcccCCCcCCEE
Confidence 9999999988863 799999999999999999999999999999999999999999999999 59999999999999
Q ss_pred EEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEECCEEEEECCe
Q psy6858 420 VWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGN 467 (592)
Q Consensus 420 v~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv~GkvV~~~g~ 467 (592)
|||++..++++.+.+++...|+||+|+.+.|+|..||++|++||++|+
T Consensus 377 ~~d~~~~~~~~~~~~~~~~~~sp~~g~~~~g~v~~t~~~G~~v~~~g~ 424 (424)
T 3gri_A 377 IIDLDSEQEIKGEDFLSKADNTPFIGYKVYGNPILTMVEGEVKFEGDK 424 (424)
T ss_dssp EEESSCCEECCGGGCSSSCCCCTTTTCEESCEEEEEEETTEEEEEC--
T ss_pred EEcCCCCEEEchhhcccccCCCCcCCCEEeeeEEEEEECCEEEEeCCC
Confidence 999999999999999999999999999999999999999999999985
No 12
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=1.6e-56 Score=485.96 Aligned_cols=450 Identities=27% Similarity=0.426 Sum_probs=371.2
Q ss_pred ccEEEEccEEEcCCCceeeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccCCCCChhhHHHHHH
Q psy6858 19 NRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGTK 98 (592)
Q Consensus 19 ~~llIkng~Iv~~d~~~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~~~~~d~~~~~~~ 98 (592)
++++|+|++|++++...+++|+|+||+|++|++....+.+.++||++|++|||||||+|+|+..+.. ....++++.+++
T Consensus 2 ~~~li~~~~v~~~~~~~~~~v~I~~g~I~~ig~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~-~~~~~~~~~~~~ 80 (458)
T 1gkr_A 2 FDVIVKNCRLVSSDGITEADILVKDGKVAAISADTSDVEASRTIDAGGKFVMPGVVDEHVHIIDMDL-KNRYGRFELDSE 80 (458)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEETTEEEEEESCCTTCCEEEEEECTTCEEEECEEEEEEECCCGGG-TTTSCCHHHHHH
T ss_pred ceEEEECcEEECCCCceeeeEEEECCEEEEecCCCCCCCCCeEEeCCCCEEecCEEEeeecccCCCC-CCchhHHHHHHH
Confidence 5799999999998766789999999999999986533345689999999999999999999976431 234577888999
Q ss_pred HHHcCCeeEEeccc-cCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChHHHHHHHHHHHHcCCcEEEEEEeeCC-
Q psy6858 99 AAVAGGTTTIIDFA-LPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKG- 176 (592)
Q Consensus 99 ~ala~GtTti~d~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~Gv~~~k~~~~~~~- 176 (592)
.++++||||++|+. ...+.....+.+........... ++++++..... ...+++.++++ .|+..++++++++.
T Consensus 81 ~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~-~g~~~i~~~~~~~~~ 155 (458)
T 1gkr_A 81 SAAVGGITTIIEMPITFPPTTTLDAFLEKKKQAGQRLK-VDFALYGGGVP---GNLPEIRKMHD-AGAVGFKSMMAASVP 155 (458)
T ss_dssp HHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCS-SEEEEEEECCT---TCHHHHHHHHH-TTCCEEEEESSCSBT
T ss_pred HHHcCCEEEEEeCCCCCCCCCCcHHHHHHHHHHhhhCc-eeEEEEeccCC---CCHHHHHHHHH-cCCcEEEEeecccCC
Confidence 99999999999987 33333334455555444444334 56666654332 22456777775 48999999988763
Q ss_pred --CcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCE
Q psy6858 177 --LYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPL 254 (592)
Q Consensus 177 --~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl 254 (592)
.+.++.+++.++++.|++++.++.+|+++...+......+...|...+..|...+|++.+.+++.+.+.++.+.++++
T Consensus 156 ~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~G~~~~~~h~~~~~~~~~~~~~~~~~~la~~~g~~~ 235 (458)
T 1gkr_A 156 GMFDAVSDGELFEIFQEIAACGSVIVVHAENETIIQALQKQIKAAGGKDMAAYEASQPVFQENEAIQRALLLQKEAGCRL 235 (458)
T ss_dssp TTBCBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHHCCEE
T ss_pred CCcccCCHHHHHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHhhcCccchhhccccCCHHHHHHHHHHHHHHHHHhCCCE
Confidence 456899999999999999999999999987665555566678898777778888899999999999999999999999
Q ss_pred EEEecccHHHHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCC
Q psy6858 255 YVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENA 334 (592)
Q Consensus 255 ~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~ 334 (592)
|++|+++....+.+..+|+. |+ .++.+++++++.++...+.. ....+.+.||+|. ....++++++++.|+
T Consensus 236 h~~H~~~~~~~~~i~~~~~~----G~--~v~~~~~p~~~~~~~~~~~~---~~~~~~~~pp~r~-~~~~~~l~~~~~~G~ 305 (458)
T 1gkr_A 236 IVLHVSNPDGVELIHQAQSE----GQ--DVHCESGPQYLNITTDDAER---IGPYMKVAPPVRS-AEMNIRLWEQLENGL 305 (458)
T ss_dssp EECCCCSHHHHHHHHHHHHT----TC--CEEEEECHHHHSCCGGGHHH---HGGGGCCSSCCCC-HHHHHHHHHHHHHTC
T ss_pred EEEeCCCHHHHHHHHHHHHC----CC--cEEEEEchHHheeCHHHhhc---cCceEEEcCCCCC-HHHHHHHHHHHhCCC
Confidence 99999988888888888877 98 89999999888665443211 1234567889886 567789999999999
Q ss_pred ceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCC
Q psy6858 335 LQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGS 414 (592)
Q Consensus 335 ~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~ 414 (592)
.+++|||+++++...+..|..+|...+.|+.|++.++..++.+++..+++++.++++++|.|||++||+++++|+|++|+
T Consensus 306 ~~~lgtD~~~~~~~~k~~g~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~l~~~~al~~~T~~~A~~lgl~~~~G~l~~G~ 385 (458)
T 1gkr_A 306 IDTLGSDHGGHPVEDKEPGWKDVWKAGNGALGLETSLPMMLTNGVNKGRLSLERLVEVMCEKPAKLFGIYPQKGTLQVGS 385 (458)
T ss_dssp CCEECCCEECCCGGGTGGGGTCGGGSCCCBCCTTTHHHHHHHHTGGGTSSCHHHHHHHHTHHHHHHHTCTTTSSSCCTTS
T ss_pred ceEEEeCCCCCChHHhccccCCHhHCCCCcccHHHHHHHHHHHHHHhCCCCHHHHHHHHhhhHHHHhCCCCCCccCCCCC
Confidence 99999999998887776555578888999999999999999888888899999999999999999999988899999999
Q ss_pred CccEEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEECCEEEEECCeeeecCCCceeecCCCCC
Q psy6858 415 DADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLPTHTNP 484 (592)
Q Consensus 415 ~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv~GkvV~~~g~l~~~~g~g~~~~~~~~~ 484 (592)
+|||||||++..+.++..++.+...|+||+|+++.++|..||++|++||++|+++...+.||||+++.|.
T Consensus 386 ~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~~~~~ 455 (458)
T 1gkr_A 386 DADLLILDLDIDTKVDASQFRSLHKYSPFDGMPVTGAPVLTMVRGTVVAEKGEVLVEQGFGQFVTRRNYE 455 (458)
T ss_dssp BCCEEEEESCCCEECCGGGCSSSCCCCTTTTCEECCEEEEEEETTEEEEETTEECSCTTCCCBCCC----
T ss_pred cCCEEEEcCCcceEEcHHHccccCCCCCcCCCEeeeEEEEEEECCEEEEECCccccCCCCCeecCCcccc
Confidence 9999999999889999889999999999999999999999999999999999999888889999998874
No 13
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=100.00 E-value=1.7e-56 Score=482.59 Aligned_cols=426 Identities=22% Similarity=0.362 Sum_probs=355.6
Q ss_pred ccEEEEccEEEcCCC-ceeeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccCCCCChhhHHHHH
Q psy6858 19 NRLLIKNGKVVNADK-ISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGT 97 (592)
Q Consensus 19 ~~llIkng~Iv~~d~-~~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~~~~~d~~~~~~ 97 (592)
|+++|+|++|+++.. ...++|+|+||+|++|++... +.+.++||++|++|+|||||+|+|+..+. ....++++.++
T Consensus 1 m~~~i~~~~v~~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~~id~~g~~v~PG~iD~H~H~~~~~--~~~~~~~~~~~ 77 (428)
T 3mpg_A 1 MNYLFKNGRYMNEEGKIVATDLLVQDGKIAKVAENIT-ADNAEVIDVNGKLIAPGLVDVHVHLREPG--GEHKETIETGT 77 (428)
T ss_dssp CEEEEEEEEEECSSSCEEEEEEEEESSBEEECCSSCC-CTTSEEEECTTCEEEECEEEEEECCCTTT--CTTTCCHHHHH
T ss_pred CcEEEEeeEEEeCCCCeeeeeEEEECCEEEEecCCCC-CCCCeEEECCCCEEeeCEEEEeeccCCCC--CCchhHHHHHH
Confidence 689999999997443 457999999999999998654 34779999999999999999999997653 34678899999
Q ss_pred HHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCC-ChHHHHHHHHHHHHcCCcEEEEEEeeCC
Q psy6858 98 KAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWW-SDQVQQEMAELCEKHGVNSFKTFMAYKG 176 (592)
Q Consensus 98 ~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~lv~~~Gv~~~k~~~~~~~ 176 (592)
+.++++||||++++....+.....+.++.+...+.....+++..+..+... ..+...++.++.+ .|+..| ++++
T Consensus 78 ~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~-~G~~~~----~~~~ 152 (428)
T 3mpg_A 78 LAAAKGGFTTICAMPNTRPVPDCREHMEDLQNRIKEKAHVNVLPYGAITVRQAGSEMTDFETLKE-LGAFAF----TDDG 152 (428)
T ss_dssp HHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEECEESBGGGCSSSBCCHHHHHH-TTCCCE----ECTT
T ss_pred HHHHhCCeEEEEeCCCCCCCCCcHHHHHHHHHHhcccCCcEEEEEeeEecCCCcchHHHHHHHHH-hCCEEE----ECCC
Confidence 999999999999997665555555666655555444344555544433321 1223345666664 477666 4556
Q ss_pred CcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEE
Q psy6858 177 LYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYV 256 (592)
Q Consensus 177 ~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i 256 (592)
.+..+++.++++++.++++|.++.+|+++..++... ....|...++.+..++|...|.+++.+.+.+++..++++|+
T Consensus 153 ~~~~~~~~l~~~~~~a~~~g~~v~vH~~~~~~~~~~---~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~g~~~~i 229 (428)
T 3mpg_A 153 VGVQDASMMLAAMKRAAKLNMAVVAHCEENTLINKG---CVHEGKFSEKHGLNGIPSVCESVHIARDILLAEAADCHYHV 229 (428)
T ss_dssp SCCCCHHHHHHHHHHHHHTTCCEEECCCCGGGCTTC---SEETTHHHHHTTCCEECTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred cCCCCHHHHHHHHHHHHhcCCeEEEECCChhHhhhH---HhhcCccchhhCcCCCCHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 677899999999999999999999999987654311 11122222344566789999999999999999999999999
Q ss_pred EecccHHHHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCCce
Q psy6858 257 VHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQ 336 (592)
Q Consensus 257 ~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~ 336 (592)
.|+++.++.+.++.+++. |+ .+++|+|++++.++...+.. ....+.++||+|. ..++++||+++..|.++
T Consensus 230 ~H~s~~~~~~~i~~a~~~----G~--~v~~e~~p~~l~l~~~~~~~---~~~~~~~~Pplr~-~~~~~~l~~~l~~G~i~ 299 (428)
T 3mpg_A 230 CHVSTKGSVRVIRDAKRA----GI--KVTAEVTPHHLVLCEDDIPS---ADPNFKMNPPLRG-KEDHEALIEGLLDGTID 299 (428)
T ss_dssp CSCCCHHHHHHHHHHHHT----TC--CEEECBCHHHHHCCGGGCCS---SCGGGCCSSCCCC-HHHHHHHHHHHHHTSSC
T ss_pred EeCCCHHHHHHHHHHHhc----CC--CEEEEEchHHhEECHHHHhC---CCCeEEEeCCCCC-HHHHHHHHHHHhCCCCc
Confidence 999999999999999999 99 99999999999998887753 3557789999997 67889999999999999
Q ss_pred EEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCc
Q psy6858 337 TTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDA 416 (592)
Q Consensus 337 ~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~A 416 (592)
+++|||++++...+.. +|...|.|++|++.+++.+|++++..+++++.++++++|.|||++||+ + +|+|++|++|
T Consensus 300 ~i~tDh~p~~~~~k~~---~~~~~p~g~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~-~-~g~i~~G~~A 374 (428)
T 3mpg_A 300 MIATDHAPHTAEEKAQ---GIERAPFGITGFETAFPLLYTNLVKKGIITLEQLIQFLTEKPADTFGL-E-AGRLKEGRTA 374 (428)
T ss_dssp CBCCCBCCCCTTGGGS---CTTTSCSCCCCTTTHHHHHHHHTTTTTSSCHHHHHHTTTHHHHHHHTC-S-CSCCCTTSBC
T ss_pred EEEcCCCCCCHHHccc---CHhhCCCCceehhhHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCC-C-CccccCCCcC
Confidence 9999999999888865 699999999999999999999999999999999999999999999999 4 9999999999
Q ss_pred cEEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEECCEEEEECCeeee
Q psy6858 417 DIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRV 470 (592)
Q Consensus 417 DlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv~GkvV~~~g~l~~ 470 (592)
||||||++..++++.+.+++...++||+|.++.|+|..||++|++||++|++++
T Consensus 375 d~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~~~g~v~~t~v~G~~v~~~g~~~~ 428 (428)
T 3mpg_A 375 DITIIDLEQEEEIDPTTFLSKGKNTPFAGWKCQGWPVMTIVGGKIAWQKESALV 428 (428)
T ss_dssp CEEEEESSCCEECCGGGCSSSCCCCSCTTCEECCEEEEEEETTEEEEECSCC--
T ss_pred CEEEEcCCCCEEEchhhccccCCCCCcCCCEEeeEEEEEEECCEEEEeCCcccC
Confidence 999999999999999999999999999999999999999999999999998753
No 14
>2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis}
Probab=100.00 E-value=6.6e-54 Score=465.83 Aligned_cols=437 Identities=22% Similarity=0.283 Sum_probs=355.9
Q ss_pred cccEEEEccEEEcCCCceeeEEEEECCEEEEeec-CCCC---CCCCeEEecCCCEEeeCccccCcCcccccCCCCChhhH
Q psy6858 18 QNRLLIKNGKVVNADKISDLDIYIENGVIQQLGR-NLIV---PGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDF 93 (592)
Q Consensus 18 ~~~llIkng~Iv~~d~~~~~dV~I~dG~I~~Ig~-~~~~---~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~~~~~d~~ 93 (592)
+|+++|+|++|++++....++|+|+||+|++|++ .... +.+.++||++|++|+|||||+|+|+..+ +..+.+++
T Consensus 3 ~m~~li~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~--~~~~~e~~ 80 (452)
T 2gwn_A 3 AMKILLRNALITNEGKTFPGSVMIDGAFISRIIEGELPADDNLSADEVIECSGLRLFPGCIDDQVHFREP--GLTHKATI 80 (452)
T ss_dssp CSEEEEEEEEEEETTEEEEEEEEEETTEEEEEEESCCCTTCCTTCSEEEECTTCEEEECEEEEEECCCTT--TCTTTCCH
T ss_pred cccEEEECeEEECCCceeeeeEEEECCEEEEEecCCCccccCCCCCeEEeCCCCEEecCEEeeccccCCC--CCCcHHHH
Confidence 5789999999999876668999999999999997 5432 3356899999999999999999999765 23467889
Q ss_pred HHHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChHHHHHHHHHHHHcCCcEEEEEEe
Q psy6858 94 YHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMA 173 (592)
Q Consensus 94 ~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~Gv~~~k~~~~ 173 (592)
+.+++.++++||||++|+....+.....+.+..+...+..+..++++++...+..+ .+++.+++ +.|+.++|.++.
T Consensus 81 ~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~-~~g~~g~k~~~~ 156 (452)
T 2gwn_A 81 ASESRAAVAGGVTSFMDMPNTNPPTTMWERLLEKRQIGADTAWANYGFFFGGTNDN---IDEIKRVD-KHLVPGLKLFLG 156 (452)
T ss_dssp HHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEECEECCSSC---HHHHHTCC-TTSCSCEEEESS
T ss_pred HHHHHHHHhCCeEEEEcCCCCCCCCChHHHHHHHHHHhhccCcccEEEEEeecCCC---HHHHHHHH-HcCCCEEEEEec
Confidence 99999999999999999976555555667777776666666788998887776544 23455444 348889999987
Q ss_pred eCC--CcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHH-HHcCC-CCCCCccCCCcHHHHHHHHHHHHHHhcc
Q psy6858 174 YKG--LYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKL-LAAGI-KGPEGHQLSRPEEVEAEAVTRACTIANQ 249 (592)
Q Consensus 174 ~~~--~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~-~~~G~-~~p~~~~~s~p~~~e~eav~~~i~la~~ 249 (592)
+.. ....+.+.+++.+ ++.+.++.+|+++.+.+.....++ ...|. ..+..|...+|...+.+.+.+++.++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~h~~~~~~~~~~~~~~~~~~G~~~~~~~h~~~~~~~~~~~~l~~~~~la~~ 233 (452)
T 2gwn_A 157 SSTGNMLVDNKETLEKIF---GECDLLIATHCEKEEIIRANKEHYKAKYGNDLDIHFHPLIRSEEACYRSSAEAVELAER 233 (452)
T ss_dssp SCCGGGBCCCHHHHHHHH---HHCCSCEEEECCCHHHHHHHHHHHHHHHCSCCCGGGHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcccCCHHHHHHHH---HHcCCEEEEcCCCHHHHHhHHhhhhhhcCcccchhhccccCChHHHHHHHHHHHHHHHH
Confidence 542 1223455666555 445888899999877666655554 55664 5666677778888999999999999999
Q ss_pred cCCCEEEEecccHHHHHHHHH--H-HHHHHhcCCceeeeeecccceeecCCCCCCCcccccccceecCCCCCCCCCHHHH
Q psy6858 250 VDCPLYVVHIMSKAAGDAMAY--K-RKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHL 326 (592)
Q Consensus 250 ~~~pl~i~hv~s~~a~~~i~~--a-r~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l 326 (592)
.++++++.|+++.+..+.+.. + ++. .|+.+++++++.++...+.. .+..++++||+|. ......+
T Consensus 234 ~g~~v~i~H~~~~~~~~~~~~~~a~~~~--------~v~~~~~~h~~~l~~~~~~~---~g~~~~~~P~lr~-~~~~~~l 301 (452)
T 2gwn_A 234 MNARLHILHLSTEKELSLFRNDIPTAQK--------RITSEVCVHHLWFSDTDYGR---LGNRIKWNPAIKK-ESDREAL 301 (452)
T ss_dssp HTCCEEECCCCCTGGGGGSCCSSCGGGC--------SEEEEEEHHHHHCCGGGHHH---HGGGGCCSSCCCC-HHHHHHH
T ss_pred hCCCEEEEeCCCHHHHHHHHHhhcccCC--------CeEEEEchHHhhcCHHHHhc---cCceEEECCCCCC-HHHHHHH
Confidence 999999999998776666654 2 222 46889999998887655421 3456678899886 5567899
Q ss_pred HHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCC
Q psy6858 327 LTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPK 406 (592)
Q Consensus 327 ~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~ 406 (592)
+++++.|+.+++|||+++++...+. .+|..+|.|++|+|.+++.+++ .+..+++++.++++++|.|||++||++ +
T Consensus 302 ~~~l~~Gv~~~lgTD~~~~~~~~k~---~~~~~~~~g~~~~e~~~~~~~~-~~~~~~ls~~~~l~~~T~~~A~~lgl~-~ 376 (452)
T 2gwn_A 302 RAAVRNGRIDIIATDHAPHLLREKE---GSCLQAASGGPLVQHSLLALLE-LCNQGIFSIEEIVSKTAHIPATLFAIE-K 376 (452)
T ss_dssp HHHHHHSSSCEEECCBCCCCHHHHC---SCTTTSCCCCCCTTTHHHHHHH-HHHTTSSCHHHHHHHHTHHHHHHHTBT-T
T ss_pred HHHHHCCCceEEEeCCCCCChHHhc---CChhhCCCCCccHHHHHHHHHH-HHHcCCCCHHHHHHHHhHhHHHHcCCC-C
Confidence 9999999999999999998876554 3789999999999999998887 555678999999999999999999996 7
Q ss_pred CccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEECCEEEEECCeeeecCCCceeecC
Q psy6858 407 KGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLPT 480 (592)
Q Consensus 407 ~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv~GkvV~~~g~l~~~~g~g~~~~~ 480 (592)
+|+|++|++|||||||++..+.++.+.+.+...|+||+|+++.+.|..||++|++||++|+++...+.|+||++
T Consensus 377 ~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~v~v~G~~v~~~g~~~~~~~~G~~~~~ 450 (452)
T 2gwn_A 377 RGYIRPGYYADLVLVDPSSPHTVSADNILSLCGWSPFEGFTFSHSVAYTFVNGCLAYAKGRLAESRPTVHPLFF 450 (452)
T ss_dssp CSSCCTTSBCCEEEEETTSCEECCTTTCCSTTCCCTTTTCEESCEEEEEEETTEEEEETTEECSSCCCCCBCCB
T ss_pred CCcccCCCcCCEEEEcCCCCeEECHHHccccCCCCCCCCcEEeeeEEEEEECCEEEEECCeeccCCCCceeeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999887789999974
No 15
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=100.00 E-value=2.2e-49 Score=425.79 Aligned_cols=417 Identities=20% Similarity=0.291 Sum_probs=321.3
Q ss_pred EEEEccEEEcCCC-ceeeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccCCCCChhhHHHHHHH
Q psy6858 21 LLIKNGKVVNADK-ISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGTKA 99 (592)
Q Consensus 21 llIkng~Iv~~d~-~~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~~~~~d~~~~~~~~ 99 (592)
++|+|++|++++. ...++|+|+||+|++|++. .+.++||++|++|+|||||+|+|+..+.. .+.++++..++.
T Consensus 2 ~~i~~~~v~~~~~~~~~~~v~i~~g~I~~i~~~----~~~~~id~~g~~v~PG~iD~H~H~~~~~~--~~~~~~~~~~~~ 75 (426)
T 2z00_A 2 ILIRNVRLVDARGERGPADVLIGEGRILSLEGG----EAKQVVDGTGCFLAPGFLDLHAHLREPGE--EVKEDLFSGLLA 75 (426)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEETTEEEESBCC----CCSEEEECTTCEEEECEEEEEECCCTTTC--TTTCCHHHHHHH
T ss_pred EEEEeeEEECCCCceecceEEEECCEEEEEecC----CCceEEeCCCCEEecCEEEeccccCCCCC--CchHHHHHHHHH
Confidence 6899999999775 3478999999999999975 25689999999999999999999976532 345788889999
Q ss_pred HHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeecccccc-CCChHHHHHHHHHHHHcCCcEEEEEEeeCCCc
Q psy6858 100 AVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGIT-WWSDQVQQEMAELCEKHGVNSFKTFMAYKGLY 178 (592)
Q Consensus 100 ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~lv~~~Gv~~~k~~~~~~~~~ 178 (592)
++++||||++++....+.....+.++.+.+.+.....+++..+..+. .+.++..++++++++ .|+..|+ .+..+
T Consensus 76 ~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~i~----~~~~~ 150 (426)
T 2z00_A 76 AVRGGYTDLVSMPNTKPPVDTPEAVRALKEKAKALGLARLHPAAALTEKQEGKTLTPAGLLRE-AGAVLLT----DDGRT 150 (426)
T ss_dssp HHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHTSSEECCEECSBGGGCSSSBCCHHHHHH-HTCCEEE----CTTSC
T ss_pred HHhCCccEEEecCCCCCCcChHHHHHHHHHHhcccCcccEEEEEEeecCCChhhHHHHHHHHH-cCCEEEE----CCCcC
Confidence 99999999999875433333333444333333221212222222111 111122345666665 4776654 34455
Q ss_pred CCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcc------cCC
Q psy6858 179 MLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQ------VDC 252 (592)
Q Consensus 179 ~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~------~~~ 252 (592)
.+++++|.++++.|+++|.++.+|+++...+... .+..|......+...+|...|..++.+++.++.+ .++
T Consensus 151 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~---~~~~g~~~~~~g~~~~~~~~e~~~~~~~~~~a~~~~~~~~~g~ 227 (426)
T 2z00_A 151 NEDAGVLAAGLLMAAPLGLPVAVHAEDAGLRRNG---VMNDGPLADLLGLPGNPPEAEAARIARDLEVLRYALRRSPATP 227 (426)
T ss_dssp CCCHHHHHHHHHHHGGGTCCEEECCCCHHHHTTC---SEECSHHHHHHTCCEECHHHHHHHHHHHHHHHHHHHHHCSSCC
T ss_pred CCCHHHHHHHHHHHHhhCCEEEEeCCCHHHHhhh---hhccCccchhcccccCChHHHHHHHHHHHHHHhhccccccCCC
Confidence 6789999999999999999999999875533210 0001100111123345666777788888888887 899
Q ss_pred CEEEEecccHHHHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhc
Q psy6858 253 PLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNE 332 (592)
Q Consensus 253 pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~ 332 (592)
++++.|+++.+..+.++++++. |+ .|+.+++++++..++..+.. .+..+.+.||+|. ..+.+.||++++.
T Consensus 228 ~~~i~H~~~~~~~~~i~~~~~~----G~--~v~~~~~p~~~~~~~~~~~~---~~~~~~~~~plr~-~~~~~~l~~~l~~ 297 (426)
T 2z00_A 228 RLHVQHLSTKRGLELVREAKRA----GL--PVTAEATPHHLTLTEEALRT---FDPLFKVAPPLRG-EEDREALLEGLLD 297 (426)
T ss_dssp CEEETTCCCHHHHHHHHHHHHT----TC--CEEEEECHHHHHCCGGGGGG---CCGGGCCSSCCCC-HHHHHHHHHHHHH
T ss_pred cEEEEeCCCHHHHHHHHHHHHc----CC--CEEEEEchHHhEeCHhHhhc---cCceEEEeCCCCC-HHHHHHHHHHHhC
Confidence 9999999998888999999988 99 99999999998776654321 2234567899995 5677899999999
Q ss_pred CCceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccC
Q psy6858 333 NALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAE 412 (592)
Q Consensus 333 G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~ 412 (592)
|..+++||||+|++...+. ++|...|.|+.+++.+++.++..++..+.++++++++++|.|||++||+ + +|+|++
T Consensus 298 G~~~~lgsD~~p~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~T~n~A~~lgl-~-~G~l~~ 372 (426)
T 2z00_A 298 GTLDAIATDHAPHTLAEKE---KDLLRAPFGIPSLEVAFPLLYTELHLKRGFPLQRLVELFTDGPRRVLGL-P-PLHLEE 372 (426)
T ss_dssp TSSCEECCCBCCCCTTGGG---SCTTTSCCCBCCTTTHHHHHHHHTHHHHCCCHHHHHHHHTHHHHHHHTC-C-CCCSST
T ss_pred CCcEEEecCCCCCCHHHcc---CChhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhHHHHhCC-C-cccccC
Confidence 9999999999998876553 4799999999999999999998777778899999999999999999999 4 999999
Q ss_pred CCCccEEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEECCEEEEECCe
Q psy6858 413 GSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGN 467 (592)
Q Consensus 413 G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv~GkvV~~~g~ 467 (592)
|++|||||||+ ..++++.+++++...++||+|+.+.+.|..||++|++||++++
T Consensus 373 G~~ADlvv~d~-~~~~~~~~~~~~~~~~~p~~g~~~~~~v~~t~v~G~~v~~~~~ 426 (426)
T 2z00_A 373 GAEASLVLLSP-KERPVDPSAFASKARYSPWAGWVLGGWPVLTLVAGRIVHEALK 426 (426)
T ss_dssp TSBCCEEEEEC-CCEECCGGGCSSSCCCCTTTTCEECCEEEEEEETTEEEEECCC
T ss_pred CCCCCEEEEeC-CcEEEcHHHccccCCCCCcCCCEEEEEEEEEEECCEEEEecCC
Confidence 99999999999 6888888899999999999999999999999999999999875
No 16
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*
Probab=100.00 E-value=7.4e-48 Score=419.89 Aligned_cols=420 Identities=23% Similarity=0.299 Sum_probs=293.7
Q ss_pred ccccEEEEccEEEcCCC--ceeeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccCCCCChhhHH
Q psy6858 17 SQNRLLIKNGKVVNADK--ISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFY 94 (592)
Q Consensus 17 ~~~~llIkng~Iv~~d~--~~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~~~~~d~~~ 94 (592)
.+|+++|+|++|++++. ...++|+|+||+|++|++... +.+.++||++|++|+|||||+|+|+..+. ....++++
T Consensus 45 ~mm~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~~iD~~g~~v~PGlID~H~H~~~~~--~~~~~~~~ 121 (467)
T 1xrt_A 45 WMLKLIVKNGYVIDPSQNLEGEFDILVENGKIKKIDKNIL-VPEAEIIDAKGLIVCPGFIDIHVHLRDPG--QTYKEDIE 121 (467)
T ss_dssp -CCEEEEESCEEEEGGGTEEEECEEEEETTEEEEEESSCC-CSSEEEEECTTSEEEECEEEEEECCCTTT--CTTTCCHH
T ss_pred ceeeEEEEeeEEECCCCCceecceEEEECCEEEEecCCCC-CCCCcEEeCCCCEEccCEEEEeecccCCC--CCchhhHH
Confidence 35789999999998764 357899999999999998643 34568999999999999999999997642 23467788
Q ss_pred HHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeecccccc-CCChHHHHHHHHHHHHcCCcEEEEEEe
Q psy6858 95 HGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGIT-WWSDQVQQEMAELCEKHGVNSFKTFMA 173 (592)
Q Consensus 95 ~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~lv~~~Gv~~~k~~~~ 173 (592)
.+++.++++||||++|+....+.....+.++...+.+.....+++..+..+. .+.....++++++++ .|+..+.
T Consensus 122 ~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~l~~-~g~~~i~---- 196 (467)
T 1xrt_A 122 SGSRCAVAGGFTTIVCMPNTNPPIDNTTVVNYILQKSKSVGLCRVLPTGTITKGRKGKEIADFYSLKE-AGCVAFT---- 196 (467)
T ss_dssp HHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEECBCSBGGGCSSSBCCHHHHHH-HTCCCBC----
T ss_pred HHHHHHHhCCeEEEEecCCCCCCCChHHHHHHHHHHhcccCcceEEEEeeecCCCCcccHHHHHHHHH-cCCEEEE----
Confidence 8999999999999999875433323333333333332221212222222111 111122345556654 3665442
Q ss_pred eCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCC
Q psy6858 174 YKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCP 253 (592)
Q Consensus 174 ~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~p 253 (592)
.++...++.++|+++++.|+++|.++.+|+++...+.. .++.|....+++....+...|..++.+.+.++...+++
T Consensus 197 ~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~~~~----~l~~g~~~~~~g~~~~~~~~e~~~~~~~~~~~~~~g~~ 272 (467)
T 1xrt_A 197 DDGSPVMDSSVMRKALELASQLGVPIMDHCEDDKLAYG----VINEGEVSALLGLSSRAPEAEEIQIARDGILAQRTGGH 272 (467)
T ss_dssp CTTSCCCCHHHHHHHHHHHHHHTCEEEECCCGGGGTC------------------------CHHHHHHHHHHHHHHHCCE
T ss_pred cCCCCCCCHHHHHHHHHHHHhcCCEEEEECCCHHHHHH----HHhcCccchhcccccCChHHHHHHHHHHHHHHHHhCCC
Confidence 34455678999999999999999999999987654431 22334444444444455556667777888888888999
Q ss_pred EEEEecccHHHHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcC
Q psy6858 254 LYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNEN 333 (592)
Q Consensus 254 l~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G 333 (592)
+|+.|+++.+..+.++.+++. |+ .++.+.+++++.++...+.. ....+.+.||+|. ......++++++.|
T Consensus 273 ~hi~H~~~~~~~~~i~~~~~~----G~--~v~~~~~p~~~~~~~~~~~~---~~~~~~~~pplr~-~~~~~~l~~~l~~G 342 (467)
T 1xrt_A 273 VHIQHVSTKLSLEIIEFFKEK----GV--KITCEVNPNHLLFTEREVLN---SGANARVNPPLRK-KEDRLALIEGVKRG 342 (467)
T ss_dssp EEESCCCSHHHHHHHHHHHHT----TC--CEEEEECGGGGC--------------------------CCHHHHHHHHHHT
T ss_pred EEEEeCCCHHHHHHHHHHHhc----CC--cEEEeccHHHHhcCHhHhhc---cCceEEEcCCCCC-HHHHHHHHHHHhCC
Confidence 999999998889999999888 98 88999999887766554321 1223456788886 67889999999999
Q ss_pred CceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCC
Q psy6858 334 ALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEG 413 (592)
Q Consensus 334 ~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G 413 (592)
+.+++|||+++++...+. .|..+|.|+.|++.+++.+++ ++..+.|++.++++++|.|||++||++ +|+|++|
T Consensus 343 v~~~lgTD~~~~~~~~~~----~~~~~~~g~~g~e~~l~~~l~-~~~~g~ls~~~al~~aT~n~A~~lgl~--~G~I~~G 415 (467)
T 1xrt_A 343 IIDCFATDHAPHQTFEKE----LVEFAMPGIIGLQTALPSALE-LYRKGIISLKKLIEMFTINPARIIGVD--LGTLKLG 415 (467)
T ss_dssp CSCEECCCBCCCCC---------------CCCCGGGHHHHHHH-HHHTTSSCHHHHHHHHTHHHHHHHTCS--CSCCCTT
T ss_pred ceEEEeeCCCCCChhHhc----ccccCCCCCccHHHHHHHHHH-HHHcCCCCHHHHHHHhccCHHHHhCCC--cccccCC
Confidence 999999999988765442 388899999999999998887 777777999999999999999999994 9999999
Q ss_pred CCccEEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEECCEEEEEC
Q psy6858 414 SDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDE 465 (592)
Q Consensus 414 ~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv~GkvV~~~ 465 (592)
++|||||||++..+.++.+++.+...++||+++...+.|..||++|++||+|
T Consensus 416 ~~ADlvvld~~~~~~i~~~~~~~~~~~~p~~g~~~~~~V~~viv~G~~v~~~ 467 (467)
T 1xrt_A 416 SPADITIFDPNKEWILNEETNLSKSRNTPLWGKVLKGKVIYTIKDGKMVYKD 467 (467)
T ss_dssp SBCCEEEEEEEEEEECSTTTCCSSCCCCTTTTCEEEEEEEEEEETTEEEEEC
T ss_pred CCCCEEEEeCCCCEEEChHHccCcCCCCCccCCEEeEEEEEEEECCEEEecC
Confidence 9999999999988899988888888899999999999999999999999986
No 17
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=100.00 E-value=3.8e-42 Score=376.05 Aligned_cols=394 Identities=19% Similarity=0.189 Sum_probs=290.7
Q ss_pred cccEEEEccEEEcCCC--ceeeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccCCCCChhhHHH
Q psy6858 18 QNRLLIKNGKVVNADK--ISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYH 95 (592)
Q Consensus 18 ~~~llIkng~Iv~~d~--~~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~~~~~d~~~~ 95 (592)
+++++|+|++|+|++. ...++|+|+||+|++|++... +.+.++||++|++|+|||||+|+|+........
T Consensus 6 ~~~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~~id~~g~~v~PG~iD~H~H~~~~~~~~~------- 77 (480)
T 3gip_A 6 KLDFKITGGWIIDGTGAPRRRADLGVRDGRIAAIGELGA-HPARHAWDASGKIVAPGFIDVHGHDDLMFVEKP------- 77 (480)
T ss_dssp CEEEEEESSEECCSSSCCCEECEEEEETTEEEEEECCTT-SCEEEEEECTTSEEEECEEESSCCCTTHHHHST-------
T ss_pred cCCEEEECcEEECCCCCeeeeeEEEEECCEEEEecCCCC-CCCCeEEECCCCEEccCEEeccccccccccCCh-------
Confidence 5789999999999875 468999999999999998653 346789999999999999999999876532211
Q ss_pred HHHHHHcCCeeEEecc---------ccCCCC---ccH------HHHHHHHHHHhc-cCceeeeecccccc----------
Q psy6858 96 GTKAAVAGGTTTIIDF---------ALPRKG---ESL------IKTYESWRQKAD-EKVCCDYALHVGIT---------- 146 (592)
Q Consensus 96 ~~~~ala~GtTti~d~---------~~~~~~---~~~------~~a~~~~~~~~~-~~~~~~~~~~~~~~---------- 146 (592)
+...++++||||+++. ....+. ..+ .+.+..+..... .+..++++++++..
T Consensus 78 ~~~~~~~~G~Tt~~~g~cG~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~r~~~~g~~ 157 (480)
T 3gip_A 78 DLRWKTSQGITTVVVGNCGVSAAPAPLPGNTAAALALLGETPLFADVPAYFAALDAQRPMINVAALVGHANLRLAAMRDP 157 (480)
T ss_dssp TCHHHHTTTEEEEEECCTTCCSCSCCCTTCCCGGGGGTCSSCCCSSHHHHHHHHHHSCCSSEEEEEEEHHHHHHHHCSST
T ss_pred hHHHHhcCCeeEEEecCCCcCCCCCCcccchhhhhhhhccCccccCHHHHHHHHHhCCCCceEEEccccHHHHHHhcCCc
Confidence 1345689999999982 111110 011 122344443332 34667888765432
Q ss_pred --CCChHHHHHHHHHHH---HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCC
Q psy6858 147 --WWSDQVQQEMAELCE---KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGI 221 (592)
Q Consensus 147 --~~~~~~~~~~~~lv~---~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~ 221 (592)
.++.+..++|.++++ +.|+.+|+.++.|......+++++.++++.++++|.++++|+++...
T Consensus 158 ~~~~~~~~l~~m~~l~~~~~~~Ga~g~~~~~~y~p~~~~~~~el~~~~~~a~~~g~~v~~H~~~~~~------------- 224 (480)
T 3gip_A 158 QAAPTAAEQQAMQDMLQAALEAGAVGFSTGLAYQPGAVAQAAELEGLARVAAERRRLHTSHIRNEAD------------- 224 (480)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSTTGGGCCHHHHHHHHHHHHHTTCEEEEECSCSST-------------
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCcEEeecCccCCcccCCHHHHHHHHHHHHHcCCEEEEEecCccc-------------
Confidence 345667778888875 46999999998886555578999999999999999999999987431
Q ss_pred CCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecc---------cHHHHHHHHHHHHHHHhcCCceeeeeecccce
Q psy6858 222 KGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIM---------SKAAGDAMAYKRKELMKKGKHCTLYGETLAAA 292 (592)
Q Consensus 222 ~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~---------s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~ 292 (592)
.+.+++.+++.++++.++|+|+.|++ +.+..+.|+.++++ |+ .|++++++++
T Consensus 225 -------------~~~~a~~e~i~la~~~g~~v~i~H~s~~~~~~~~~~~~~l~~i~~a~~~----G~--~Vt~e~~p~~ 285 (480)
T 3gip_A 225 -------------GVEAAVEEVLAIGRGTGCATVVSHHKCMMPQNWGRSRATLANIDRAREQ----GV--EVALDIYPYP 285 (480)
T ss_dssp -------------THHHHHHHHHHHHHHHCCEEEETTCCCCSGGGTTTHHHHHHHHHHHHHT----TC--CEEEEECSCS
T ss_pred -------------cHHHHHHHHHHHHHHhCCCEEEEEEeccCccchhhHHHHHHHHHHHHHc----CC--ceEEEeeccc
Confidence 13578889999999999999999998 58999999999999 99 9999999999
Q ss_pred eecCCCCCCCcccccccceec-------CCCCCC----------CCCHHHHHHHHhc-----------------CCceEE
Q psy6858 293 VGTHANQIPCTWHDQAAHVLS-------PPLRPD----------ETTPTHLLTLLNE-----------------NALQTT 338 (592)
Q Consensus 293 l~~d~~~~~~~~~~~~~~~~~-------pplr~~----------~~~~~~l~~~l~~-----------------G~~~~~ 338 (592)
+..+...+... ...+.+. ||++.. .+..+++++++.. +...++
T Consensus 286 ~~~t~~~l~~~---~~~~~~~~~~~~~~p~~~g~~~~~ia~~~~~~~~~a~~~~l~~g~i~~~~~~~~~~~~~~~~~~~~ 362 (480)
T 3gip_A 286 GSSTILIPERA---ETIDDIRITWSTPHPECSGEYLADIAARWGCDKTTAARRLAPAGAIYFAMDEDEVKRIFQHPCCMV 362 (480)
T ss_dssp CEEEECCGGGT---TTSSCCEEEEESSCGGGTTCBHHHHHHHHTSCHHHHHHHHCSEEEEECCCCHHHHHHHHHSTTEEE
T ss_pred cCcchhhhcCH---HHHHHHhhccccCCCccCCCcHHHHHHHcCCCHHHHHHHhccCCeEEEeCCHHHHHHHHcCCCeEE
Confidence 98876544332 1111122 666431 2334556655443 344555
Q ss_pred eCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhcc-CCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCcc
Q psy6858 339 GSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVV-PGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDAD 417 (592)
Q Consensus 339 gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~-~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~AD 417 (592)
|||+.+.. +....+++..++.+|.+++. .+.++++++++++|.|||++||+ +++|+|++|++||
T Consensus 363 gsD~~~~~--------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~t~~~a~~~g~-~~~G~l~~G~~AD 427 (480)
T 3gip_A 363 GSDGLPND--------------ARPHPRLWGSFTRVLGRYVREARLMTLEQAVARMTALPARVFGF-AERGVLQPGAWAD 427 (480)
T ss_dssp CCCCCTTC--------------SSCCTHHHHHHHHHHHCCCCCTCSSCHHHHHHHHTHHHHHHHTC-TTCSSCSTTSBCC
T ss_pred ecCCcccC--------------CCCChhhhhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHcCC-CCCCccCCCCCCC
Confidence 66654432 22345578889999988887 57899999999999999999999 5679999999999
Q ss_pred EEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEECCEEEEECCeeeecCCCceeecCC
Q psy6858 418 IVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLPTH 481 (592)
Q Consensus 418 lVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv~GkvV~~~g~l~~~~g~g~~~~~~ 481 (592)
|||||++.... ..++.+ + ....+.+..||++|++||++|+++. ..||+|++.
T Consensus 428 ~vv~d~~~~~~--~~~~~~-----~---~~~~~~v~~v~v~G~~v~~~g~~~~--~~G~~lr~~ 479 (480)
T 3gip_A 428 VVVFDPDTVAD--RATWDE-----P---TLASVGIAGVLVNGAEVFPQPPADG--RPGQVLRAG 479 (480)
T ss_dssp EEEECTTTCBC--CCCSSS-----T---TCCCBSEEEEEETTEEEESSCCSSS--CCCCBCCC-
T ss_pred EEEEcCccccC--cccccc-----c---cccCCCccEEEECCEEEEECCeEcC--CCCcCcCCC
Confidence 99999996432 112211 1 2334568999999999999999987 699999874
No 18
>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp}
Probab=100.00 E-value=4.8e-44 Score=373.73 Aligned_cols=325 Identities=14% Similarity=0.095 Sum_probs=267.5
Q ss_pred CCCEEeeCccccCcCcccccCCCCChhhHHHHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCce-eeeeccc
Q psy6858 65 AGSYVIPGGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVC-CDYALHV 143 (592)
Q Consensus 65 ~G~~V~PG~ID~HtH~~~~~~~~~~~d~~~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~ 143 (592)
.|++|+||+||+|+|+.. . ..+..+.+|+++|+||+++|.+..+..+..+.++.+++++....+ ++|++++
T Consensus 22 ~~~~vlPG~ID~HvHlre-G-------~~~~e~~aA~aGG~Ttvi~mPnt~P~~~~~~~~~~~~~~a~~~~~~vd~~~~~ 93 (359)
T 3pnu_A 22 SNAMKLKNPLDMHLHLRD-N-------QMLELIAPLSARDFCAAVIMPNLIPPLCNLEDLKAYKMRILKACKDENFTPLM 93 (359)
T ss_dssp SCCEEEESCEEEEECCCS-H-------HHHHHHHHHHHTTCSEEEECCCCSSCCCSHHHHHHHHHHHHHHHTTSCCEEEE
T ss_pred CCcEEccCcEEccccCCC-C-------CcchhHHHHHhCCCcEEEECCCCCCCCCcHHHHHHHHHHHhccCCCceEEEee
Confidence 589999999999999975 2 345667799999999999999888887888899998888877777 9999999
Q ss_pred c--ccCCChHHHHHHHHHHHHcCCcEEEEEEee----C--CCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHH
Q psy6858 144 G--ITWWSDQVQQEMAELCEKHGVNSFKTFMAY----K--GLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQK 215 (592)
Q Consensus 144 ~--~~~~~~~~~~~~~~lv~~~Gv~~~k~~~~~----~--~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~ 215 (592)
. ++..+ .+++.++.+ . +.+||+|+++ . +....+++.++++++.++++|.++.+|+|+.+++.
T Consensus 94 ~l~lt~~~---~~el~~l~~-~-v~~~Kl~~aga~~~s~~~~~~~~~~~l~~~l~~~~~~g~~v~vHaEd~~~i~----- 163 (359)
T 3pnu_A 94 TLFFKNYD---EKFLYSAKD-E-IFGIKLYPAGITTNSNGGVSSFDIEYLKPTLEAMSDLNIPLLVHGETNDFVM----- 163 (359)
T ss_dssp EEECSCCC---HHHHHHHTT-T-CSEEEECBTTSSSSCTTSBCCCCHHHHHHHHHHHHHTTCCEEECCCCSSCGG-----
T ss_pred eeEecCCC---HHHHHHHHH-h-hhehhheeCCCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEecCCchHhH-----
Confidence 8 87443 456777654 3 8899999963 2 12233889999999999999999999999987532
Q ss_pred HHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhccc-CCCEEEEecccHHHHHHHHHHHHHHHhcCCceeeeeecccceee
Q psy6858 216 LLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQV-DCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVG 294 (592)
Q Consensus 216 ~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~-~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~ 294 (592)
..|.+++.|++.++++. ++|+||.|++++++++.|+.+ . .|++|+|++||.
T Consensus 164 ------------------~~E~~ai~r~~~la~~~~g~~lhi~HvSt~~~v~~I~~A--~--------~VtaEv~phhL~ 215 (359)
T 3pnu_A 164 ------------------DRESNFAKIYEKLAKHFPRLKIVMEHITTKTLCELLKDY--E--------NLYATITLHHLI 215 (359)
T ss_dssp ------------------GTTGGGHHHHHHHHHHCTTSCEEECSCCSHHHHHHHHHC--T--------TEEEEECSGGGT
T ss_pred ------------------HHHHHHHHHHHHHHHHcCCCcEEEEecCcHHHHHHHHhc--C--------CceEEEechhhE
Confidence 13557788999999864 999999999999999999876 3 899999999999
Q ss_pred cCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCCce-EEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHH
Q psy6858 295 THANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQ-TTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSV 373 (592)
Q Consensus 295 ~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~-~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~ 373 (592)
++..++... ..+..++++||+|. .+++++||+.|.+|.++ +++|||+|+...+|.. +| .+.|+.+++..+++
T Consensus 216 lt~~~~~~~-~~~~~~k~~PPLR~-~~dr~aL~~al~dG~id~~iaTDHaPh~~~eK~~---~~--g~~Gi~~~~~~L~l 288 (359)
T 3pnu_A 216 ITLDDVIGG-KMNPHLFCKPIAKR-YEDKEALCELAFSGYEKVMFGSDSAPHPKDTKEC---CG--CAAGVFSAPVILPV 288 (359)
T ss_dssp CCHHHHHTS-SCCGGGCCSSCCCC-HHHHHHHHHHHHTTCTTEEECCCBCCCBC---------C--CCSCBCCGGGHHHH
T ss_pred EcHHHhcCc-CCCCceEEcCCCCC-HHHHHHHHHHHhcCCCCEEEecCCCCCCHHHhCC---CC--CCCChhhHHHHHHH
Confidence 998776421 12467889999998 78999999999999999 7999999999888753 33 35677777788888
Q ss_pred HHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcc-cCeEEeeee
Q psy6858 374 IWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIF-EGLVCHGVP 452 (592)
Q Consensus 374 ~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~-~g~~~~g~~ 452 (592)
+|+.+ .++++++++++++|.||||+|||++++| |||+||| ..++++.+.+++.++|+|| +|++++|+|
T Consensus 289 ~~~~~--~~~~~l~~lv~~~s~nPAki~gL~~~~G-------Adlvl~d--~~~~v~~~~~~s~~~~tPf~~G~~l~G~v 357 (359)
T 3pnu_A 289 LAELF--KQNSSEENLQKFLSDNTCKIYDLKFKED-------KILTLEE--KEWQVPNVYEDKYNQVVPYMAGEILKFQL 357 (359)
T ss_dssp HHHHH--HHHSCHHHHHHHHTHHHHHHHTCCCSSC-------CEEEEEC--CCEECCSCEECSSCEECCTTTTCEESCEE
T ss_pred HHHHH--hhcCCHHHHHHHHHHhHHHHhCCCCCCC-------CeEEEEe--cCEEeCchhcccCCCccccCCCCEEEEEE
Confidence 99744 3456999999999999999999976655 9999999 7899999999999999999 999999988
Q ss_pred e
Q psy6858 453 E 453 (592)
Q Consensus 453 ~ 453 (592)
.
T Consensus 358 ~ 358 (359)
T 3pnu_A 358 K 358 (359)
T ss_dssp C
T ss_pred e
Confidence 5
No 19
>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A*
Probab=100.00 E-value=2.5e-40 Score=346.55 Aligned_cols=332 Identities=14% Similarity=0.083 Sum_probs=266.3
Q ss_pred CCCEEeeCccccCcCcccccCCCCChhhHHHHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeecc--
Q psy6858 65 AGSYVIPGGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALH-- 142 (592)
Q Consensus 65 ~G~~V~PG~ID~HtH~~~~~~~~~~~d~~~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~-- 142 (592)
++++|+||+||+|+|+.. . ..+.++++|+++||||++||....+.....+.++.+...+..+..++|.++
T Consensus 4 ~~~~v~PG~ID~HvH~~~-g-------~~~~e~~aa~~gGvTtvv~mpnt~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (347)
T 2z26_A 4 SQVLKIRRPDDWHLHLRD-G-------DMLKTVVPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDAVPAGHDFTPL 75 (347)
T ss_dssp CCEEEEECCCEEEECCCS-H-------HHHHHHHHHHHTTCSEEEECCCCSSCCCSHHHHHHHHHHHHHTSCTTCCCEEE
T ss_pred CCeEECCCcceeeecCCC-C-------CchhhHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHhcccCCcccEEEE
Confidence 568999999999999965 2 124567899999999999998776676777778888777766555555554
Q ss_pred ccccCCChHHHHHHHHHHHHcCC-cEEEEEEeeC----CCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHH
Q psy6858 143 VGITWWSDQVQQEMAELCEKHGV-NSFKTFMAYK----GLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLL 217 (592)
Q Consensus 143 ~~~~~~~~~~~~~~~~lv~~~Gv-~~~k~~~~~~----~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~ 217 (592)
..+..+.+...+++..+.+ .|+ .+||+||++. +....+++.|+++++.++++|.++.+|+|+....
T Consensus 76 ~~~~~~~~~~~~ei~~l~~-~G~~~g~K~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~vH~ed~~~~-------- 146 (347)
T 2z26_A 76 MTCYLTDSLDPNELERGFN-EGVFTAAKLYPANATANSSHGVTSVDAIMPVLERMEKIGMPLLVHGEVTHAD-------- 146 (347)
T ss_dssp EEEECCTTCCHHHHHHHHH-TTSEEEEEECCCCTTCCTTTCCSCGGGGHHHHHHHHHHTCCEEECCCCCCTT--------
T ss_pred EEEEeCCCCCHHHHHHHHH-CCCeEEEEEeecCCcCCCCCccCCHHHHHHHHHHHHHhCCEEEEEecCCccc--------
Confidence 3432222223678888775 697 8999999875 2334578899999999999999999999986410
Q ss_pred HcCCCCCCCccCCCcHHHHHHHHHHHH--HHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCceeeeeecccceeec
Q psy6858 218 AAGIKGPEGHQLSRPEEVEAEAVTRAC--TIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGT 295 (592)
Q Consensus 218 ~~G~~~p~~~~~s~p~~~e~eav~~~i--~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~ 295 (592)
+ .+...|.+++.+.+ .+++..++|+|++|+++.++.+.|+.+| . .|++|++++||.+
T Consensus 147 ---~---------~~~~~E~~~~~~~i~~~la~~~~~~~hi~Hvst~~~~~~i~~ak-------~--~Vt~e~~ph~L~l 205 (347)
T 2z26_A 147 ---I---------DIFDREARFIESVMEPLRQRLTALKVVFEHITTKDAADYVRDGN-------E--RLAATITPQHLMF 205 (347)
T ss_dssp ---S---------CGGGHHHHHHHHTHHHHHHHSTTCCEEECSCCSHHHHHHHHTSC-------T--TEEEEECHHHHHC
T ss_pred ---c---------CHHHHHHHHHHHHHHHHHHhhcCCcEEEEECCcHHHHHHHHHhC-------C--CceEeecchHhee
Confidence 0 12224566788888 6899999999999999999999988763 3 8999999999999
Q ss_pred CCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCCce-EEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHH
Q psy6858 296 HANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQ-TTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVI 374 (592)
Q Consensus 296 d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~-~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~ 374 (592)
+..++.. +..+..++++||||. .+++++||+.+..|.+. +++|||+|+...+|.. +|. +.|+.|+|..|+++
T Consensus 206 ~~~~~~~-~~~~~~~k~~PPLR~-~~d~~aL~~~l~~G~id~~i~SDhaP~~~~~K~~---~~g--~~Gi~~~e~~l~l~ 278 (347)
T 2z26_A 206 NRNHMLV-GGVRPHLYCLPILKR-NIHQQALRELVASGFNRVFLGTDSAPHARHRKES---SCG--CAGCFNAPTALGSY 278 (347)
T ss_dssp CHHHHHT-TSBCGGGCCSSCCCC-HHHHHHHHHHHHTTCTTEEECCCBCCCCHHHHSS---SSB--CCCCCCTTTHHHHH
T ss_pred cHHHhcC-cCCCccEEEeCCCCC-HHHHHHHHHHHhcCCCCeEEecCCCCCCHHHhcC---CCC--CCCcCcHHHHHHHH
Confidence 8776532 124557889999997 78899999999999999 8999999999887753 343 47788889999999
Q ss_pred HHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcc-cCeEEeeeee
Q psy6858 375 WEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIF-EGLVCHGVPE 453 (592)
Q Consensus 375 ~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~-~g~~~~g~~~ 453 (592)
|. .+ .++++++++++++|.||||+|||+++||+| +|| +..++++.+.+++.+.|+|| +|++++|+|.
T Consensus 279 ~~-~~-~~~~sl~~~v~~~s~nPAki~gl~~~kG~i--------~l~--~~~~~v~~~~~~s~~~~sPf~~G~~l~g~v~ 346 (347)
T 2z26_A 279 AT-VF-EEMNALQHFEAFCSVNGPQFYGLPVNDTFI--------ELV--REEQQVAESIALTDDTLVPFLAGETVRWSVK 346 (347)
T ss_dssp HH-HH-HHTTCGGGHHHHHHTHHHHHHTCCCCCCEE--------EEE--CCCEECCSCEECSSSEECCTTTTCEESCEEC
T ss_pred HH-Hh-hcCCCHHHHHHHHhHhHHHHhCCCCCCCeE--------EEE--cceEEEchhhccccCCcccccCCcEEEeEEe
Confidence 97 44 467899999999999999999997789986 777 66799999999999999999 7999999885
No 20
>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A
Probab=100.00 E-value=2e-38 Score=348.14 Aligned_cols=396 Identities=17% Similarity=0.170 Sum_probs=267.7
Q ss_pred cccEEEEccEEEcCCC--ceeeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccCCCCChhhHHH
Q psy6858 18 QNRLLIKNGKVVNADK--ISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYH 95 (592)
Q Consensus 18 ~~~llIkng~Iv~~d~--~~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~~~~~d~~~~ 95 (592)
.|+++|+|++|++++. ...++|+|+||+|++|++... +.+.++||++|++|+|||||+|+|+.++.... .
T Consensus 20 ~~~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~~iD~~g~~v~PG~iD~H~H~~~~~~~~-------~ 91 (496)
T 1rk6_A 20 PFDYILSGGTVIDGTNAPGRLADVGVRGDRIAAVGDLSA-SSARRRIDVAGKVVSPGFIDSHTHDDNYLLKH-------R 91 (496)
T ss_dssp CBSEEEESSEECCSSSCCCEECEEEEETTEEEEEECCTT-SCBSCEEECTTCEEEECEEESSCCCTTHHHHC-------T
T ss_pred cccEEEECCEEEeCCCCceeccEEEEECCEEEEecCCCC-CCCCeEEeCCCCEEecCEeeeeecCCcccccc-------H
Confidence 4689999999999764 367899999999999997643 34568999999999999999999997654311 2
Q ss_pred HHHHHHcCCeeEEeccccC---CCCc--cH--------------HHHHHHHHHHhcc-Cceeeeecccc---c-------
Q psy6858 96 GTKAAVAGGTTTIIDFALP---RKGE--SL--------------IKTYESWRQKADE-KVCCDYALHVG---I------- 145 (592)
Q Consensus 96 ~~~~ala~GtTti~d~~~~---~~~~--~~--------------~~a~~~~~~~~~~-~~~~~~~~~~~---~------- 145 (592)
..+.++++||||++++... .+.. .+ ..++..+.+.... ...+++.+... +
T Consensus 92 ~~~~~~~~G~Tt~~~~~~g~~~~p~~~~~l~~~i~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~~~~~~~ 171 (496)
T 1rk6_A 92 DMTPKISQGVTTVVTGNCGISLAPLAHANPPAPLDLLDEGGSFRFARFSDYLEALRAAPPAVNAACMVGHSTLRAAVMPD 171 (496)
T ss_dssp TCHHHHTTTEEEEEESCTTCCSCSEECSSCCTTGGGGCSSSCCEESSHHHHHHHHHHSCCSSEEEEEEEHHHHHHHHCSC
T ss_pred HHHHHHcCCeEEEEeCCCCCCCCCCChHHHHHhhcccCcccccCccCHHHHHHHHhccCCccceEEecccccceeeeccc
Confidence 3577899999999986321 1100 00 1111122221111 22333332211 0
Q ss_pred --cCCChHHHHHHHHHHH---HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcC
Q psy6858 146 --TWWSDQVQQEMAELCE---KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAG 220 (592)
Q Consensus 146 --~~~~~~~~~~~~~lv~---~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G 220 (592)
.....+..+++..+++ +.|+..|+.++.+......+.+++.++++.+++.+.++.+|+++...
T Consensus 172 ~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~el~~~~~~a~~~g~~v~~H~~~~~~------------ 239 (496)
T 1rk6_A 172 LRREATADEIQAMQALADDALASGAIGISTGAFYPPAAHASTEEIIEVCRPLITHGGVYATHMRDEGE------------ 239 (496)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSGGGTTCCHHHHHHHHTHHHHHTCEEEEECSCSST------------
T ss_pred cccCCCHHHHHHHHHHHHHHHHcCCcEEeeccccCCCCCCCHHHHHHHHHHHHHcCCEEEEEeCCCcc------------
Confidence 0112334556666663 46888887654432223457889999999999999999999986321
Q ss_pred CCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEec---------ccHHHHHHHHHHHHHHHhcCCceeeeeecccc
Q psy6858 221 IKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHI---------MSKAAGDAMAYKRKELMKKGKHCTLYGETLAA 291 (592)
Q Consensus 221 ~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv---------~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~ 291 (592)
.+.+++.+.+.++.+.++++++.|+ .+.+..+.+..++.. | .++.+.+++
T Consensus 240 --------------~~~~~l~~~~~~a~~~g~~v~i~H~~~~~~~~~g~~~~~~~~l~~a~~~----g---~v~~~~~~~ 298 (496)
T 1rk6_A 240 --------------HIVQALEETFRIGRELDVPVVISHHKVMGKLNFGRSKETLALIEAAMAS----Q---DVSLDAYPY 298 (496)
T ss_dssp --------------THHHHHHHHHHHHHHHTSCEEECSCCCCSGGGTTTHHHHHHHHHHHHHH----S---CEEEEECSC
T ss_pred --------------cHHHHHHHHHHHHHHcCCeEEEEEEeccCCcchhhHHHHHHHHHHHHHc----C---CeEEEEecc
Confidence 2346677888889999999999999 556667888888877 7 456666655
Q ss_pred eeecCCCCCCCccccc--ccceecCCC--------------CCCCCCHHHHHHHHhcCC-----------------ceEE
Q psy6858 292 AVGTHANQIPCTWHDQ--AAHVLSPPL--------------RPDETTPTHLLTLLNENA-----------------LQTT 338 (592)
Q Consensus 292 ~l~~d~~~~~~~~~~~--~~~~~~ppl--------------r~~~~~~~~l~~~l~~G~-----------------~~~~ 338 (592)
++......+. .+... .....+|+. |. ....+++|++++.|+ .+++
T Consensus 299 ~~~~~~~~~~-~l~~~~~~~v~~~p~~~~l~~~~l~~~~~~~g-~~~~~~l~~~l~~G~i~~~~~~~~v~~~~~~~~~~i 376 (496)
T 1rk6_A 299 VAGSTMLKQD-RVLLAGRTLITWCKPYPELSGRDLEEIAAERG-KSKYDVVPELQPAGAIYFMMDEPDVQRILAFGPTMI 376 (496)
T ss_dssp SCEEEECCCC-TTTTSSCEEEEEESSCGGGTTCBHHHHHHHTT-SCHHHHHHHHCSEEEEECCCCHHHHHHHHHSTTEEE
T ss_pred CCCCCcccHH-HhcCccceEEeccCCCcccccCcHHHHHHHcC-CCHHHHHHHHHhcCceeecCCHHHHHHHHcCCCEEE
Confidence 4433322211 12211 122223432 22 345788999999998 5899
Q ss_pred eCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhcc-CCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCcc
Q psy6858 339 GSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVV-PGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDAD 417 (592)
Q Consensus 339 gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~-~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~AD 417 (592)
|||+.+++. + + ....+..++.++.+++. .+.+++.++++++|.|||++||+ +++|+|++|++||
T Consensus 377 GTD~~~~~~---------~---~--~~~~~~~~~~~l~~~v~~~~~l~~~~~l~~~T~~~A~~lgl-~~~G~i~~G~~AD 441 (496)
T 1rk6_A 377 GSDGLPHDE---------R---P--HPRLWGTFPRVLGHYSRDLGLFPLETAVWKMTGLTAAKFGL-AERGQVQPGYYAD 441 (496)
T ss_dssp CCCCCTTCS---------S---C--CTHHHHHHHHHHCCCCCCTCSSCHHHHHHTTTHHHHHHHTC-TTCSSCCTTSBCC
T ss_pred ecCCCCCCC---------C---C--CchhhccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHhCC-CCCCCcCCCCccc
Confidence 999987541 0 0 12334566777776775 57799999999999999999999 4699999999999
Q ss_pred EEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEECCEEEEECCeeeecCCCceeecCCC
Q psy6858 418 IVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRVAQGQGNYLPTHT 482 (592)
Q Consensus 418 lVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv~GkvV~~~g~l~~~~g~g~~~~~~~ 482 (592)
|||||++.....+ .+ .+++ ...+.|..||++|++|+++|+++... .|+++++++
T Consensus 442 lv~~d~~~~~~~~--~~-----~~~~---~~~~~v~~v~v~G~~v~~~g~~~~~~-~g~~l~~~~ 495 (496)
T 1rk6_A 442 LVVFDPATVADSA--TF-----EHPT---ERAAGIHSVYVNGAAVWEDQSFTGQH-AGRVLNRAG 495 (496)
T ss_dssp EEEECTTTCBCCC--CS-----SSTT---CCCBSEEEEEETTEEEEETTEECSCC-CCCBCCC--
T ss_pred EEEEcCccccccc--cc-----cccc---ccCCCceEEEECCEEEEECCeeccCC-CceEeecCC
Confidence 9999998643221 11 1333 24467899999999999999997654 699998653
No 21
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=100.00 E-value=3.2e-36 Score=328.62 Aligned_cols=381 Identities=18% Similarity=0.234 Sum_probs=242.2
Q ss_pred ccccccEEEEccEEE-cCC--C--ceeeEEEEECCEEEEeecCCCCC-CCCeEEecCCCEEeeCccccCcCcccccCC--
Q psy6858 15 QSSQNRLLIKNGKVV-NAD--K--ISDLDIYIENGVIQQLGRNLIVP-GGVRVIDAAGSYVIPGGIDPHTHFELELMG-- 86 (592)
Q Consensus 15 ~~~~~~llIkng~Iv-~~d--~--~~~~dV~I~dG~I~~Ig~~~~~~-~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~-- 86 (592)
.+.+++++|+|++|+ +.| . ..+++|+|+||+|++||+....+ .+.++||++|++|||||||+|+|+.+....
T Consensus 25 ~~~m~~~li~n~~vv~t~d~~~~~~~~~~V~I~~g~I~~Vg~~~~~~~~~~~viD~~g~~v~PGlID~H~Hl~~~~~rg~ 104 (479)
T 3h4u_A 25 SSRPKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELPETADEVLDLRGHLVIPGLVNTHHHMYQSLTRAV 104 (479)
T ss_dssp ----CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGSCSCCSEEEECTTEEEEECEEECCCCGGGGGSCSC
T ss_pred cchhhhheeECCeEEEeeCCCCceecccEEEEECCEEEEEeCCcccCCCCCeEEeCCCCEEecceeecccccchhhhccc
Confidence 345689999999976 333 2 24799999999999999865443 578999999999999999999999765431
Q ss_pred --------------------CCChhhHHHH----HHHHHcCCeeEEeccccC-CCCccHHHHHHHHHHHhccCceeeeec
Q psy6858 87 --------------------ATSVDDFYHG----TKAAVAGGTTTIIDFALP-RKGESLIKTYESWRQKADEKVCCDYAL 141 (592)
Q Consensus 87 --------------------~~~~d~~~~~----~~~ala~GtTti~d~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~ 141 (592)
..+.++++.+ ...++++||||+.|+... .....+...++....... +....++.
T Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~g~-r~~~~~~~ 183 (479)
T 3h4u_A 105 PAAQNAELFGWLTNLYKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDSIGAAQRIGM-RFHASRGA 183 (479)
T ss_dssp TTTTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCBCCCCTTCCHHHHHHHHHHHTC-EEEEEEEE
T ss_pred cccCCCCHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHhCCeEEEEECccccCCcchHHHHHHHHHHcCC-EEEEEeee
Confidence 1345555543 445678999999998533 222233333333333322 23322222
Q ss_pred ccc-----------ccCCChHHHHHHHHHHHHc-C---CcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCch
Q psy6858 142 HVG-----------ITWWSDQVQQEMAELCEKH-G---VNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENG 206 (592)
Q Consensus 142 ~~~-----------~~~~~~~~~~~~~~lv~~~-G---v~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~ 206 (592)
... .....++..++..++++.. + ...++..++++..+.++++++.++++.|+++|+++++|+.+.
T Consensus 184 ~~~~~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~ 263 (479)
T 3h4u_A 184 MSVGQRDGGLPPDSVVEREPDILRDTQRLIETYHDEGRYAMLRVVVAPCSPFSVSRDLMRDAAVLAREYGVSLHTHLAEN 263 (479)
T ss_dssp CC----------------CHHHHHHHHHHHHHHCCCSTTCSEEEEEEESCTTSSCHHHHHHHHHHHHHHTCEEEEEESCS
T ss_pred cccccccccCCcccccccHHHHHHHHHHHHHHhhccCCCCceEEEEecCCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 111 0011234555666666542 2 235677778888888999999999999999999999998543
Q ss_pred h-hhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCceeee
Q psy6858 207 E-IIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLY 285 (592)
Q Consensus 207 ~-~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~ 285 (592)
. .+..... ..|.. + +. .+.-....+.+..+.|+.... .+.++.+++. |+ .+.
T Consensus 264 ~~~~~~~~~---~~g~~---------~-------~~-~~~~~g~~~~~~~i~H~~~~~-~~~~~~l~~~----g~--~v~ 316 (479)
T 3h4u_A 264 VNDIAYSRE---KFGMT---------P-------AE-YAEDLGWVGHDVWHAHCVQLD-DAGIGLFART----GT--GVA 316 (479)
T ss_dssp HHHHHC----------C---------H-------HH-HHHHTTCCSTTEEEEECTTCC-HHHHHHHHHH----TC--EEE
T ss_pred HHHHHHHHH---HcCCC---------H-------HH-HHHHcCCCCCCeEEEEecCCC-HHHHHHHHHc----CC--eEE
Confidence 2 1111110 01110 0 00 111122334566677776433 2345566666 76 332
Q ss_pred -eecccceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCCCCC
Q psy6858 286 -GETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGV 364 (592)
Q Consensus 286 -~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~ 364 (592)
+......+ +. ..+| +.++++.|+.+++|||+.+.+.....+
T Consensus 317 ~~p~s~~~l---~~-------------~~~~----------~~~~~~~Gv~v~lgtD~~~~~~~~~~~------------ 358 (479)
T 3h4u_A 317 HCPCSNMRL---AS-------------GIAP----------VKKMRLAGVPVGLGVDGSASNDGAQMV------------ 358 (479)
T ss_dssp ECHHHHHHT---TC-------------CCCC----------HHHHHHTTCCEEECCCCTTSSCCCCHH------------
T ss_pred EChhHhhhc---CC-------------CCCC----------HHHHHHCCCeEEEeCCCCccCCCcCHH------------
Confidence 22111110 00 1122 447899999999999987653221111
Q ss_pred cchhhHHHHHHHhhc-cCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcc
Q psy6858 365 NGVQDRLSVIWEKGV-VPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIF 443 (592)
Q Consensus 365 ~g~e~~~~~~~~~~v-~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~ 443 (592)
-+.++...+.+.. ....+++.++++++|.|||++||+++ +|+|++|+.|||||||.+.....+. .++|+
T Consensus 359 --~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~-~G~l~~G~~ADlvv~d~~~~~~~~~-------~~~~~ 428 (479)
T 3h4u_A 359 --AEVRQALLLQRVGFGPDAMTAREALEIATLGGAKVLNRDD-IGALKPGMAADFAAFDLRQPLFAGA-------LHDPV 428 (479)
T ss_dssp --HHHHHHHHHHHHHHCTTSCCHHHHHHHTTHHHHHHHTCSS-SSSCSTTSBCCEEEEETTSGGGTTC-------TTSHH
T ss_pred --HHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHhCCCC-CCccCCCCcCCEEEEeCCCCccCCc-------ccCHH
Confidence 1444455454332 23459999999999999999999976 9999999999999999985443321 46788
Q ss_pred cCeEE--eeeeeEEEECCEEEEECCeeeec
Q psy6858 444 EGLVC--HGVPEYVIVGGRVCVDEGNLRVA 471 (592)
Q Consensus 444 ~g~~~--~g~~~~Viv~GkvV~~~g~l~~~ 471 (592)
+++.+ .+.|..||++|++||++|+++..
T Consensus 429 ~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~ 458 (479)
T 3h4u_A 429 AALVFCAPSQTAYTVVNGKVVVREGRLATL 458 (479)
T ss_dssp HHHHHSSCCCCSEEEETTEEEEETTEECSS
T ss_pred HHHHccCCCCcCEEEECCEEEEECCEECCC
Confidence 88776 67899999999999999999754
No 22
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14
Probab=100.00 E-value=1.3e-37 Score=328.87 Aligned_cols=357 Identities=21% Similarity=0.166 Sum_probs=230.3
Q ss_pred ccccEEEEccEEEcCCCceeeEEEEECCEEEEeecCCCCCCCCeEEecCC-CEEeeCccccCcCcccccCCCCChhhHHH
Q psy6858 17 SQNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAG-SYVIPGGIDPHTHFELELMGATSVDDFYH 95 (592)
Q Consensus 17 ~~~~llIkng~Iv~~d~~~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G-~~V~PG~ID~HtH~~~~~~~~~~~d~~~~ 95 (592)
.+|+++|+|++|++++ .++|+|+||+|++|++... +.+.++||++| ++|+|||||+|+|+..+.... .+ .
T Consensus 3 ~~~~~~i~~~~v~~~~---~~~v~i~~g~I~~ig~~~~-~~~~~~iD~~g~~~v~PG~ID~H~H~~~~~~~~--~~---~ 73 (379)
T 2ics_A 3 LDYDLLIKNGQTVNGM---PVEIAIKEKKIAAVAATIS-GSAKETIHLEPGTYVSAGWIDDHVHCFEKMALY--YD---Y 73 (379)
T ss_dssp -CEEEEEEEEECTTSC---EEEEEEETTEEEEEESCCC-CCEEEEEECCTTCEEEECEEEEEECCCTTSSSS--CC---C
T ss_pred ccccEEEECCEEEcCC---cceEEEECCEEEEecCCCC-CCCCcEEeCCCCEEEccCEEEeccccCccCccc--cC---c
Confidence 4578999999999965 7899999999999998643 23568999999 999999999999997654221 12 3
Q ss_pred HHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhcc--CceeeeeccccccC--C---ChHHHHHHHHHHHH--cCCc
Q psy6858 96 GTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADE--KVCCDYALHVGITW--W---SDQVQQEMAELCEK--HGVN 166 (592)
Q Consensus 96 ~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~--~---~~~~~~~~~~lv~~--~Gv~ 166 (592)
.++.++++||||++|+..... .+ .+.+.+..+.... .+.+++......+. + .+...+++++++++ .++.
T Consensus 74 ~~~~~~~~GvTtv~d~~~~~~-~~-~~~~~~~~~~~~~~i~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (379)
T 2ics_A 74 PDEIGVKKGVTTVIDAGTTGA-EN-IHEFYDLAQQAKTNVFGLVNISKWGIVAQDELADLSKVQASLVKKAIQELPDFVV 151 (379)
T ss_dssp HHHHTGGGTEEEEEEESSSCT-TT-HHHHHHHHHTSSSEEEEEEESSTTTTSSSCTTSSGGGCCHHHHHHHHHHCTTTEE
T ss_pred hhhhHhhCceeEEEcCCCCCc-cC-HHHHHHHHHhhcccEEEEccccccCCCCHHHHHHHHHHHHHHHHHHHHhhhCcce
Confidence 457789999999998753222 22 2333333333321 22333322211111 1 12234677777764 3777
Q ss_pred EEEEEEeeCCCcCCCHHHHHHHHHHHHH-cCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHH
Q psy6858 167 SFKTFMAYKGLYMLSDGELYDAFSAIKN-LGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACT 245 (592)
Q Consensus 167 ~~k~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~ 245 (592)
.++.++.+.....++.+.+.++++.|++ +|.++.+|+............+++.| . ...|.+
T Consensus 152 ~i~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~v~~H~~~~~~~~~~~~~~~~~g-~-~~~H~~---------------- 213 (379)
T 2ics_A 152 GIKARMSRTVIGDNGITPLELAKQIQQENQEIPLMVHIGSAPPHLDEILALMEKG-D-VLTHCF---------------- 213 (379)
T ss_dssp EEEEEESHHHHTTCTTHHHHHHHHHHHTTTTCCEEEEECSSSSCHHHHHHHCCTT-C-EEESTT----------------
T ss_pred EEEEeccccccccchHHHHHHHHHHHHHhcCCeEEEeCCCCcchHHHHHHHhhcC-C-eeeecc----------------
Confidence 8888876543445788899999999999 99999999875322122222222222 1 111111
Q ss_pred HhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCcccccccceecCCCCCCCCCHHH
Q psy6858 246 IANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTH 325 (592)
Q Consensus 246 la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~ 325 (592)
.+.+.++.|.++....+.+..+++. |+ .+ ++++.+ . ......
T Consensus 214 ----~~~~~~~~~~s~~~~~~~~~~~~~~----g~--~~--~~~p~~-------------------------~-~~~~~~ 255 (379)
T 2ics_A 214 ----NGKENGILDQATDKIKDFAWQAYNK----GV--VF--DIGHGT-------------------------D-SFNFHV 255 (379)
T ss_dssp ----CCSTTSSEETTTTEECHHHHHHHHT----TC--EE--ECCCTT-------------------------T-SCCHHH
T ss_pred ----CCCccchhhccCHHHHHHHHHHHHc----CC--EE--EecCCC-------------------------C-CcCHHH
Confidence 1233445555444334556666555 66 22 222110 0 113456
Q ss_pred HHHHHhcC-CceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCC
Q psy6858 326 LLTLLNEN-ALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLY 404 (592)
Q Consensus 326 l~~~l~~G-~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~ 404 (592)
++++++.| ..++++||+.+.+ ..-+ | +..+...+.+++. .+++++++++++|.|||++||++
T Consensus 256 ~~~~~~~G~~~~~l~TD~~~~~---~~~~-------~------~~~~~~~l~~~~~-~~ls~~~~~~~~T~n~A~~lgl~ 318 (379)
T 2ics_A 256 AETALREGMKAASISTDIYIRN---RENG-------P------VYDLATTMEKLRV-VGYDWPEIIEKVTKAPAENFHLT 318 (379)
T ss_dssp HHHHHHTTCCCSBCCCCBCHHH---HHSS-------S------CCCHHHHHHHHHH-HTCCHHHHHHTTTHHHHHHTTCT
T ss_pred HHHHHHcCCCcceEeccCcccC---CCCC-------c------HhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhCCC
Confidence 78899999 8899999985221 1100 1 1233444443333 36999999999999999999996
Q ss_pred CCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEEee----eeeEEEECCEEEEECCee
Q psy6858 405 PKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHG----VPEYVIVGGRVCVDEGNL 468 (592)
Q Consensus 405 ~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g----~~~~Viv~GkvV~~~g~l 468 (592)
+ +|+|++|++|||||||++..+.. +++++|..+.| +|..||++|++||+||..
T Consensus 319 ~-~G~l~~G~~ADlvv~d~~~~~~~----------~~~~~g~~~~~~~~~~v~~t~v~G~~v~~~~~~ 375 (379)
T 2ics_A 319 Q-KGTLEIGKDADLTIFTIQAEEKT----------LTDSNGLTRVAKEQIRPIKTIIGGQIYDNEGHH 375 (379)
T ss_dssp T-SSSCCTTSBCCEEEEEEEEEEEE----------EECTTSCEEEEEEEEEEEEEEETTEEEEC----
T ss_pred C-CcCCCCCCccCEEEEecccccce----------eecCCCCEEEeeeeeeeEEEEECCEEEecCCcc
Confidence 5 99999999999999998654331 45789999999 999999999999999975
No 23
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=100.00 E-value=8e-36 Score=323.06 Aligned_cols=377 Identities=19% Similarity=0.182 Sum_probs=241.3
Q ss_pred EEEEcc-EEEcCCCc----eeeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccCC---------
Q psy6858 21 LLIKNG-KVVNADKI----SDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMG--------- 86 (592)
Q Consensus 21 llIkng-~Iv~~d~~----~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~--------- 86 (592)
++|+|+ .|++.+.. .+++|+|+||+|++||+....+.+.++||++|++|||||||+|+|+.+..+.
T Consensus 2 ~li~n~~~v~t~d~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g~~~~~~~~ 81 (456)
T 3ls9_A 2 ILIRGLTRVITFDDQERELEDADILIDGPKIVAVGKDLSDRSVSRTIDGRGMIALPGLINSHQHLYEGAMRAIPQLERVT 81 (456)
T ss_dssp EEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEESSCCCTTCSEEEECTTEEEEECEEEEEECGGGGGGBTCGGGSSCC
T ss_pred EEEEcCcEEEEcCCCCceeccceEEEECCEEEEeCCCCCCCCCCeEEeCCCCEEecCeeecccccchhhhcccccCCCCC
Confidence 789999 77776542 5799999999999999986655678999999999999999999999654331
Q ss_pred -------------------CCChhhHHH----HHHHHHcCCeeEEeccccCCCC---ccHHHHHHHHHHHhccCceeeee
Q psy6858 87 -------------------ATSVDDFYH----GTKAAVAGGTTTIIDFALPRKG---ESLIKTYESWRQKADEKVCCDYA 140 (592)
Q Consensus 87 -------------------~~~~d~~~~----~~~~ala~GtTti~d~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~ 140 (592)
..++++++. +...++++||||+.|+...... ....++..+.......+....++
T Consensus 82 l~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~a~~~~g~r~~~~~~ 161 (456)
T 3ls9_A 82 MASWLEGVLTRSAGWWRDGKFGPDVIREVARAVLLESLLGGITTVADQHLFFPGATADSYIDATIEAATDLGIRFHAARS 161 (456)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHTTEEEEEEEECCCCSSSCCTHHHHHHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHhccccccccccccCCHHHHHHHHHHHHHHHHhCCeeEEEeccccccCcccchhHHHHHHHHHHcCCEEEEEcc
Confidence 234444444 3345688999999999433222 13333333333333323333333
Q ss_pred cccc-----------ccCCChHHHHHHHHHHHH-cC---CcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCc
Q psy6858 141 LHVG-----------ITWWSDQVQQEMAELCEK-HG---VNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAEN 205 (592)
Q Consensus 141 ~~~~-----------~~~~~~~~~~~~~~lv~~-~G---v~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (592)
.... .....++..+++.++++. .+ ...++..++++..+.++++++.++++.|+++|+++++|+.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e 241 (456)
T 3ls9_A 162 SMTLGKSEGGFCDDLFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIALGPCGVPYDKPELFEAFAQMAADYDVRLHTHFYE 241 (456)
T ss_dssp CCCCCGGGTCSSCGGGCCCHHHHHHHHHHHHHHHCCCSTTCSEEEEECCCCTTTSCHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred ccccccccccCCccccccCHHHHHHHHHHHHHHhhCcCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 2211 011223445566666654 23 44567777888888899999999999999999999999865
Q ss_pred hhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCceeee
Q psy6858 206 GEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLY 285 (592)
Q Consensus 206 ~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~ 285 (592)
.... ... +...|.. +. + .+.-....+.+..+.|+..-.. +.++.+++. |+ .+.
T Consensus 242 ~~~~-~~~--~~~~~~~---------~~----~----~~~~~g~~~~~~~i~H~~~~~~-~~~~~l~~~----g~--~~~ 294 (456)
T 3ls9_A 242 PLDA-GMS--DHLYGMT---------PW----R----FLEKHGWASDRVWLAHAVVPPR-EEIPEFADA----GV--AIA 294 (456)
T ss_dssp TTHH-HHH--HHHHSSC---------HH----H----HHHHTTCSSTTEEEEECCSCCG-GGHHHHHHH----TC--EEE
T ss_pred CchH-HHH--HHHhCCC---------HH----H----HHHHcCCCCCCcEEEeccCCCH-HHHHHHHHc----CC--EEE
Confidence 4322 111 1111111 10 1 1111223344566667653221 235555666 77 432
Q ss_pred eecccceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCCCCCc
Q psy6858 286 GETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVN 365 (592)
Q Consensus 286 ~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~ 365 (592)
.|+.+-..-+. ..+| +..+++.|+.+++|||+.+.+.....+
T Consensus 295 --~~p~s~~~l~~-------------~~~~----------~~~~~~~Gv~v~lgtD~~~~~~~~~~~------------- 336 (456)
T 3ls9_A 295 --HLIAPDLRMGW-------------GLAP----------IREYLDAGITVGFGTTGSASNDGGNLL------------- 336 (456)
T ss_dssp --ECHHHHHHTTC-------------CCCC----------HHHHHHTTCEEEECCCCTTSSCCCCHH-------------
T ss_pred --EChhHHhhcCC-------------Ccch----------HHHHHHCCCcEEEECCCCccCCCCCHH-------------
Confidence 22211000000 1122 347899999999999987653221111
Q ss_pred chhhHHHHHHHhhccCC----CCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCC
Q psy6858 366 GVQDRLSVIWEKGVVPG----ILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYN 441 (592)
Q Consensus 366 g~e~~~~~~~~~~v~~~----~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~ 441 (592)
.+.++...+.+..... ++++.++++++|.|||++||+++ +|+|++|+.|||||||.+.....+ .++
T Consensus 337 -~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~-~G~l~~G~~ADlvv~d~~~~~~~~--------~~~ 406 (456)
T 3ls9_A 337 -GDLRLAALAHRPADPNEPEKWLSARELLRMATRGSAECLGRPD-LGVLEEGRAADIACWRLDGVDRVG--------VHD 406 (456)
T ss_dssp -HHHHHHHHHTGGGSTTCGGGSCCHHHHHHHTTHHHHHHTTCTT-SSCCSTTSBCCEEEEESCSGGGTT--------BSS
T ss_pred -HHHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHhCCCC-CCccCCCCccCEEEEeCCCCccCC--------CCC
Confidence 1455555554433223 79999999999999999999976 999999999999999998543322 356
Q ss_pred cccCeEEe---eeeeEEEECCEEEEECCeeeecC
Q psy6858 442 IFEGLVCH---GVPEYVIVGGRVCVDEGNLRVAQ 472 (592)
Q Consensus 442 ~~~g~~~~---g~~~~Viv~GkvV~~~g~l~~~~ 472 (592)
|++.+.+. ..|..||++||+||++|+++...
T Consensus 407 ~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~~~d 440 (456)
T 3ls9_A 407 PAIGLIMTGLSDRASLVVVNGQVLVENERPVLAD 440 (456)
T ss_dssp HHHHHHHCCSBCCCSEEEETTEEEEETTEESSSC
T ss_pred hHHHhhccCCCCCeeEEEECCEEEEECCEeCCCC
Confidence 76666544 35899999999999999986543
No 24
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=100.00 E-value=1.6e-35 Score=322.28 Aligned_cols=375 Identities=15% Similarity=0.175 Sum_probs=241.4
Q ss_pred ccccEEEEccEEEcCCCc----------eeeEEEEECCEEEEeecCCC-CCCCCeEEecCCCEEeeCccccCcCcccccC
Q psy6858 17 SQNRLLIKNGKVVNADKI----------SDLDIYIENGVIQQLGRNLI-VPGGVRVIDAAGSYVIPGGIDPHTHFELELM 85 (592)
Q Consensus 17 ~~~~llIkng~Iv~~d~~----------~~~dV~I~dG~I~~Ig~~~~-~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~ 85 (592)
.+++++|+|++|++++.. .+++|+|+||+|++||+... .+.+.++||++|++|||||||+|+|+.+..+
T Consensus 21 ~~~~~li~~~~v~~~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~ 100 (468)
T 3lnp_A 21 AHADLRINSHWIIPIENTTDHNLVSNILIDHCLLIKDGIILAIEPQSSCQIPATETLDLGQQVLMPGWVNAHGHAAMSLF 100 (468)
T ss_dssp CCEEEEEEEEEECCSSCC-----CCSCEEEEEEEEETTEEEEEEETTTCCCCEEEEEECCSEEEEECEEECSCCGGGGGG
T ss_pred ccccEEEECCEEEeecCCcccccCccEecceEEEEECCEEEEEeCCccccCCCCeEEeCCCcEEEeCeechhhChhhhhh
Confidence 357899999999986432 37999999999999998654 3456799999999999999999999955332
Q ss_pred C----------------------CCChhhHHH----HHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeee
Q psy6858 86 G----------------------ATSVDDFYH----GTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDY 139 (592)
Q Consensus 86 ~----------------------~~~~d~~~~----~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 139 (592)
. ..+.++++. +...++++||||+.|+... . ....+...+ ...+....+
T Consensus 101 ~g~~~~~~l~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~--~---~~~~~~~~~-~g~r~~~~~ 174 (468)
T 3lnp_A 101 RGLADDLPLMTWLQEHVWPAEAQHVDEHFVKQGTELAIAEMIQSGTTTFADMYFY--P---QQSGEAALA-AGIRAVCFA 174 (468)
T ss_dssp TTSSCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECCSC--H---HHHHHHHHH-HTCEEEEEE
T ss_pred ccCcCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcccC--H---HHHHHHHHH-cCCeEEEec
Confidence 1 134455544 4445688999999998421 1 122222222 222334444
Q ss_pred eccccccC---CChHHHHHHHHHHHH-cCCc-----EEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchh-hh
Q psy6858 140 ALHVGITW---WSDQVQQEMAELCEK-HGVN-----SFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGE-II 209 (592)
Q Consensus 140 ~~~~~~~~---~~~~~~~~~~~lv~~-~Gv~-----~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~-~i 209 (592)
+.+..... ..++..+++.++++. .+.. .+++.++++..+.++++++.++++.|+++|+++++|+.... .+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~ 254 (468)
T 3lnp_A 175 PVLDFPTNYAQNADEYIRKAIECNDRFNNHPMNEQGLVQIGFGPHAPYTVSDEPLKEITMLSDQLDMPVQIHLHETDFEV 254 (468)
T ss_dssp EECSSCCSSCSSHHHHHHHHHHHHHHHHSCGGGTTCCEEEEEEECCTTTSCHHHHHHHHHHHHHHTCCEEEEESCSHHHH
T ss_pred cccCCCcccccCHHHHHHHHHHHHHHhhcCCcccCceEEEEEEcCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHH
Confidence 43321111 223344555555543 2443 67777888888889999999999999999999999986542 12
Q ss_pred HHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCceeeeeecc
Q psy6858 210 DKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETL 289 (592)
Q Consensus 210 ~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~ 289 (592)
... +...|.. + + +. +.-....+.+..+.|+..-.. +.++.+++. |+ .+. .+
T Consensus 255 ~~~---~~~~g~~---------~--i--~~----~~~~g~l~~~~~~~H~~~~~~-~~~~~l~~~----g~--~v~--~~ 305 (468)
T 3lnp_A 255 SES---LETFNKR---------P--T--QR----LADIGFLNERVSCVHMTQVDD-GDIKILQKT----GA--SII--HC 305 (468)
T ss_dssp HHH---HHHHSSC---------H--H--HH----HHHTTCCSTTEEEEECCSCCH-HHHHHHHHH----CC--EEE--EC
T ss_pred HHH---HHHhCCC---------H--H--HH----HHHcCCCCCCeEEEeccCCCH-HHHHHHHhc----CC--EEE--EC
Confidence 111 1122221 0 0 10 111222345666777764332 335666666 77 432 12
Q ss_pred cceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhh
Q psy6858 290 AAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQD 369 (592)
Q Consensus 290 ~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~ 369 (592)
+.....-+ ...+ .+..+++.|+.+++|||+...+.....+ -+.
T Consensus 306 p~s~~~~~-------------~~~~----------~~~~~~~~Gv~v~lgtD~~~~~~~~~~~--------------~~~ 348 (468)
T 3lnp_A 306 PESNLKLA-------------SGFC----------PIAKLSAANIPLAIGTDGAASNNDLDMF--------------SET 348 (468)
T ss_dssp HHHHHHTT-------------CCCC----------CHHHHHHTTCCEEECCCCTTSSCCCCHH--------------HHH
T ss_pred hhhhhhcC-------------CCCC----------CHHHHHHCCCeEEEECCCCcCCCCCCHH--------------HHH
Confidence 11100000 0111 2447899999999999987653221111 144
Q ss_pred HHHHHHHhhc--cCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeE
Q psy6858 370 RLSVIWEKGV--VPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLV 447 (592)
Q Consensus 370 ~~~~~~~~~v--~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~ 447 (592)
++...+.+.. ...++++.++++++|.|||++||+++++|+|++|++|||||||.+.....+. .+|+..+.
T Consensus 349 ~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~~~--------~~~~~~~~ 420 (468)
T 3lnp_A 349 KTAALLAKGVSQDASAIPAIEALTMATLGGARALGIDDITGSLKPGKAADIQAIDLNTLSSQPV--------FDPVSHMV 420 (468)
T ss_dssp HHHHHHHHHHHTCTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEECCSGGGCSC--------SCHHHHHH
T ss_pred HHHHHHhhhccCCCCcCCHHHHHHHHHHHHHHHhCCCCCccccCCCCcCCEEEEeCCCCccCCc--------cCHHHHhh
Confidence 5555555433 3568999999999999999999998889999999999999999986544332 34544432
Q ss_pred ---EeeeeeEEEECCEEEEECCeeeec
Q psy6858 448 ---CHGVPEYVIVGGRVCVDEGNLRVA 471 (592)
Q Consensus 448 ---~~g~~~~Viv~GkvV~~~g~l~~~ 471 (592)
..+.|..||++|++||++|+++..
T Consensus 421 ~~~~~~~v~~v~v~G~~v~~~g~~~~~ 447 (468)
T 3lnp_A 421 YCTKSTQVSHVWVNGRCLLKNGELTTL 447 (468)
T ss_dssp HSCCGGGEEEEEETTEEEEETTEESSS
T ss_pred ccCCCCCceEEEECCEEEEECCeECCC
Confidence 245899999999999999998653
No 25
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=100.00 E-value=1.3e-36 Score=328.76 Aligned_cols=374 Identities=16% Similarity=0.197 Sum_probs=241.9
Q ss_pred cccEEEEccEEEcCCC----ceeeEEEEECCEEEEeecCCCC--CCCCeEEecCCCEEeeCccccCcCcccccCC-----
Q psy6858 18 QNRLLIKNGKVVNADK----ISDLDIYIENGVIQQLGRNLIV--PGGVRVIDAAGSYVIPGGIDPHTHFELELMG----- 86 (592)
Q Consensus 18 ~~~llIkng~Iv~~d~----~~~~dV~I~dG~I~~Ig~~~~~--~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~----- 86 (592)
+++++|+|++|++++. ..+++|+|+||+|++||+.... ..+.++||++|++|||||||+|+|+.+..+.
T Consensus 5 ~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~~~~viD~~g~~v~PGlID~H~Hl~~~~~~g~~~~ 84 (447)
T 4f0r_A 5 RYEKIISARWIITVETDGEVLENHAIAIRDGKIAAIIPAADAAGLEADERLELPDHVLMPGLINLHGHSAMSLLRGLADD 84 (447)
T ss_dssp CEEEEEEEEEEECCSSTTCEEEEEEEEEETTEEEEEEEHHHHTTSCEEEEEEEEEEEEEECEEEEEECGGGGGGTTSSCS
T ss_pred cccEEEECCEEEeeCCCCcEeeceEEEEECCEEEEEecccccccCCCCeEEeCCCcEEeeCccchhhChhhHhhccCCCC
Confidence 5799999999998653 2479999999999999985432 2467899999999999999999999654322
Q ss_pred -----------------CCChhhHHHH----HHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccc
Q psy6858 87 -----------------ATSVDDFYHG----TKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGI 145 (592)
Q Consensus 87 -----------------~~~~d~~~~~----~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 145 (592)
..+.++++.+ ...++++||||++|+... .....+.... ...+..+.++.+...
T Consensus 85 ~~~~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-----~~~~~~~~~~-~g~r~~~~~~~~~~~ 158 (447)
T 4f0r_A 85 KALMDWLTNYIWPTEGKHVHDDFVFDGSLLAMGEMIRGGTTTINDMYFY-----NAAVARAGLA-SGMRTFVGCSILEFP 158 (447)
T ss_dssp SCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECBSC-----HHHHHHHHHH-HTCEEEEEEEECSSC
T ss_pred CCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcccC-----HHHHHHHHHH-cCCeEEEEchhcCCC
Confidence 1344555543 344678999999998421 1122222222 222333444333111
Q ss_pred cC---CChHHHHHHHHHHHH-cCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCch-hhhHHHHHHHHHcC
Q psy6858 146 TW---WSDQVQQEMAELCEK-HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENG-EIIDKNTQKLLAAG 220 (592)
Q Consensus 146 ~~---~~~~~~~~~~~lv~~-~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~-~~i~~~~~~~~~~G 220 (592)
.. ..++..+++.++.+. .|...+++.++++..+.++++++.++++.|+++|+++.+|+.+. +.+... +...|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~~~~~~~~~~---~~~~g 235 (447)
T 4f0r_A 159 TNYASNADDYIAKGMAERSQFLGEDLLTFTLAPHAPYTVSDDTFRKVVTLAEQEDMLIHCHIHETADEVNNS---VKEHG 235 (447)
T ss_dssp CSSCSSHHHHHHHHHHHHHTTTTCTTEEEEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHH---HHHHS
T ss_pred cccccCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCCCCHHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHH---HHHcC
Confidence 11 223445555555543 36667788888888888999999999999999999999998654 212111 11222
Q ss_pred CCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCceeee-eecccceeecCCCC
Q psy6858 221 IKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLY-GETLAAAVGTHANQ 299 (592)
Q Consensus 221 ~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~-~e~~~~~l~~d~~~ 299 (592)
.. + + + .. .-....+.+..+.|+..... +.++.+++. |+ .+. +......+ +
T Consensus 236 ~~---------~--i--~---~~-~~~g~~~~~~~~~H~~~~~~-~~~~~~~~~----g~--~~~~~p~~~~~~---~-- 286 (447)
T 4f0r_A 236 QR---------P--L--A---RL-QRLGLLSPRLVAAHMVHLND-AEVELAARH----GL--STAHNPASNMKL---A-- 286 (447)
T ss_dssp SC---------H--H--H---HH-HHHTCCSTTEEEEECCSCCH-HHHHHHHHH----TC--EEEECHHHHHHT---T--
T ss_pred CC---------H--H--H---HH-HHcCCCCCCcEEEeccCCCH-HHHHHHHHc----CC--EEEECchhhhhc---C--
Confidence 21 0 0 1 01 11223345666777764332 335556666 77 332 11111000 0
Q ss_pred CCCcccccccceecCCCCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhc
Q psy6858 300 IPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGV 379 (592)
Q Consensus 300 ~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v 379 (592)
.....+.++++.|+.+++|||+.+.+..... --+.++...+.+..
T Consensus 287 ---------------------~~~~~~~~~~~~Gv~v~lgTD~~~~~~~~~~--------------~~~~~~~~~~~~~~ 331 (447)
T 4f0r_A 287 ---------------------SGISPVSKLMDAGVAVGIGTDGAASNNKLDM--------------LAETRLAALLAKVG 331 (447)
T ss_dssp ---------------------CCCCCHHHHHHTTCEEEECCCCGGGTCCCCH--------------HHHHHHHHHHHHHH
T ss_pred ---------------------CCCCcHHHHHHCCCcEEEeCCCCcCCCCCCH--------------HHHHHHHHHHhhhh
Confidence 0011245789999999999998754321111 11445555454443
Q ss_pred --cCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEE---eeeeeE
Q psy6858 380 --VPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVC---HGVPEY 454 (592)
Q Consensus 380 --~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~---~g~~~~ 454 (592)
...++++.++++++|.|||++||+++++|+|++|++|||||||.+.....+. .+|+..+.. .+.|..
T Consensus 332 ~~~~~~l~~~~al~~~T~n~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~~~--------~~~~~~~~~~~~~~~v~~ 403 (447)
T 4f0r_A 332 TLDPTSVPAAAAIRMATLNGARALGIADKVGSVKVGKQADLIALDLAQLETAPA--------FDPISHVVYAAGREQVSH 403 (447)
T ss_dssp HTCTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEECCSGGGCSC--------SCHHHHHHHTCCGGGEEE
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHhCCCCCccccCCCCcCCEEEEeCCCCCcCCC--------cChHHHheecCCCCCceE
Confidence 3568999999999999999999998889999999999999999986554432 345444322 357999
Q ss_pred EEECCEEEEECCeeeecC
Q psy6858 455 VIVGGRVCVDEGNLRVAQ 472 (592)
Q Consensus 455 Viv~GkvV~~~g~l~~~~ 472 (592)
||++|++||++|+++...
T Consensus 404 v~v~G~~v~~~g~~~~~d 421 (447)
T 4f0r_A 404 VWVKGRALMRERKLTTLD 421 (447)
T ss_dssp EEETTEEEEETTEESSSC
T ss_pred EEECCEEEEECCeECcCC
Confidence 999999999999986543
No 26
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=1.3e-35 Score=325.05 Aligned_cols=378 Identities=16% Similarity=0.174 Sum_probs=232.6
Q ss_pred cccEEEEccE-EEcCC--------CceeeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccCCC-
Q psy6858 18 QNRLLIKNGK-VVNAD--------KISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGA- 87 (592)
Q Consensus 18 ~~~llIkng~-Iv~~d--------~~~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~~- 87 (592)
.|+++|+|++ |++++ ....++|+|+||+|++||+... +.+.++||++|++|+|||||+|+|+.......
T Consensus 9 ~~~~li~n~~~i~~~~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~-~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~g~ 87 (492)
T 2paj_A 9 QPSTLIRNAAAIMTGGRGTADDPSRVPGPDIRIVGDTIDAIGALAP-RPGETIVDATDCVIYPAWVNTHHHLFQSLLKGE 87 (492)
T ss_dssp -CEEEEECBSEEBCCCCSSSSSCSBCCCCCEEEETTEEEEESSCCC-CTTCEEEECBTCEEEECEECCCCCGGGGGCCSC
T ss_pred CCCeEEECCEEEEecCCccccccceecccEEEEECCEEEEEcCCCC-CCCCeEEECCCcEEeeCccccccChhhHhhcCc
Confidence 5789999999 99976 2357899999999999998653 34678999999999999999999996652110
Q ss_pred ----------------------CChhhHHHHHHH----HHcCCeeEEeccccCCC---CccHHHHHHHHHHHhccCceee
Q psy6858 88 ----------------------TSVDDFYHGTKA----AVAGGTTTIIDFALPRK---GESLIKTYESWRQKADEKVCCD 138 (592)
Q Consensus 88 ----------------------~~~d~~~~~~~~----ala~GtTti~d~~~~~~---~~~~~~a~~~~~~~~~~~~~~~ 138 (592)
.++++++.+++. ++++||||++|+....+ .....+.+.+.......+....
T Consensus 88 ~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~ 167 (492)
T 2paj_A 88 PAGLDATLTPWLAATPYRFRALFDERRFRLAARIGLIELARSGCATVADHNYVYYPGMPFDSSAILFEEAEKLGLRFVLL 167 (492)
T ss_dssp C-----------------CGGGCCHHHHHHHHHHHHHHHHTTTEEEEEECCCCCCTTCSSCHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCCHHHHHHhcccchhhcCCHHHHHHHHHHHHHHHHhcCcEEEEechhhcccccccchHHHHHHHHHHcCCEEEEE
Confidence 245777777776 89999999999863222 1123333333333222222222
Q ss_pred eeccc-------ccc-----CCChHHHHHHHHHHHHc-CC---cEEEEEEeeCCC-cCCCHHHHHHHHHHHHHcCCeEEE
Q psy6858 139 YALHV-------GIT-----WWSDQVQQEMAELCEKH-GV---NSFKTFMAYKGL-YMLSDGELYDAFSAIKNLGAIAMV 201 (592)
Q Consensus 139 ~~~~~-------~~~-----~~~~~~~~~~~~lv~~~-Gv---~~~k~~~~~~~~-~~~~~~~l~~~~~~a~~~g~~~~v 201 (592)
++... ... ...++..+++.++++.. +. ..+++++++++. +.++++++.++++.|+++|+++.+
T Consensus 168 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~ 247 (492)
T 2paj_A 168 RGGATQTRQLEADLPTALRPETLDAYVADIERLAARYHDASPRAMRRVVMAPTTVLYSISPREMRETAAVARRLGLRMHS 247 (492)
T ss_dssp ECCCSCCCSCSTTSCGGGCCCCHHHHHHHHHHHHHHTCCCSTTCSEEEEECCTTTTTSSCHHHHHHHHHHHHHTTCEEEE
T ss_pred chhhcccccccccCCccccccCHHHHHHHHHHHHHHhccCCCCCceEEEEecccCCCCCCHHHHHHHHHHHHHcCCcEEE
Confidence 11110 000 01123456666776542 21 246777787777 778999999999999999999999
Q ss_pred ecCchh-hhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCC
Q psy6858 202 HAENGE-IIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGK 280 (592)
Q Consensus 202 Hae~~~-~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~ 280 (592)
|+.+.. .+..... ..|.. + + + .+.. ....+.+..+.|+..-. .+.++.+++. |+
T Consensus 248 H~~~~~~~~~~~~~---~~g~~---------~--~--~---~~~~-~g~~~~~~~i~H~~~~~-~~~i~~l~~~----gv 302 (492)
T 2paj_A 248 HLSETVGYQDSAYS---MYGKS---------P--V--A---FCGE-HDWLGSDVWYAHLVKVD-ADEIALLAQT----GT 302 (492)
T ss_dssp ECC----------------CCC---------H--H--H---HHHH-TTCCSTTEEEESCCSCC-HHHHHHHHHH----TC
T ss_pred EeCCChHHHHHHHH---HcCCC---------H--H--H---HHHH-CCCCCCCcEEEEEecCC-HHHHHHHHHc----CC
Confidence 997632 1111111 11111 1 1 1 1111 11122344455654322 1236666667 76
Q ss_pred ceeeeeecccceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcC
Q psy6858 281 HCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHI 360 (592)
Q Consensus 281 ~~~v~~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~ 360 (592)
.+ ++++... +. + . ...||+| .+++.|+.+++|||+++.+..... |
T Consensus 303 --~v--~~~p~~~------~~--l--~---~~~~p~~----------~~~~~Gv~v~lgTD~~~~~~~~~~-----~--- 347 (492)
T 2paj_A 303 --GV--AHCPQSN------GR--L--G---SGICPVR----------EMADAGVPVSIGVDGAASNEAADM-----I--- 347 (492)
T ss_dssp --EE--EECHHHH------HC--C----------CCT----------THHHHTCCEEECCCHHHHCSCCSH-----H---
T ss_pred --EE--EECchhh------cc--c--C---CCCCCHH----------HHHHCCCcEEEeCCCCCCCCCCCH-----H---
Confidence 33 2332110 00 0 0 1236676 388999999999998653211000 0
Q ss_pred CCCCcchhhHHHHHHHhh----------------ccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCC
Q psy6858 361 PNGVNGVQDRLSVIWEKG----------------VVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYK 424 (592)
Q Consensus 361 p~G~~g~e~~~~~~~~~~----------------v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~ 424 (592)
-+.+.....++. +...+|++.++|+++|.|||++||++ ++|+|++|++|||||||.+
T Consensus 348 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~aT~~~A~~lgl~-~~Gsl~~Gk~ADlvvld~~ 420 (492)
T 2paj_A 348 ------SEVHMTWLAQRARLGMLAQPAYRGGSFEGGAGAASIAEVIHWGTAGGARVMGLD-EVGKVAVGYAADIAVYRLD 420 (492)
T ss_dssp ------HHHHHHHHHHHHTC-------------------CCHHHHHHHHTHHHHHHHTCT-TSSCCSTTSBCCEEEEECC
T ss_pred ------HHHHHHHHHhhhhcccccccccccccccCCcCcCCHHHHHHHHHHHHHHHhCCC-CccccCCCCccCEEEEeCC
Confidence 022222222221 13457999999999999999999997 8999999999999999998
Q ss_pred ceEEecCCcccccCCCCcccCeEEe---eeeeEEEECCEEEEECCeeeec
Q psy6858 425 AKRTISAKTHAHACDYNIFEGLVCH---GVPEYVIVGGRVCVDEGNLRVA 471 (592)
Q Consensus 425 ~~~~i~~~~~~~~~~~~~~~g~~~~---g~~~~Viv~GkvV~~~g~l~~~ 471 (592)
..+..+ .++|++++... ..|..||++|++||++|+++..
T Consensus 421 ~~~~~~--------~~~p~~~i~~~~~~~~v~~v~v~G~~v~~~g~~~~~ 462 (492)
T 2paj_A 421 DPRYFG--------LHDPAIGPVASGGRPSVMALFSAGKRVVVDDLIEGV 462 (492)
T ss_dssp SGGGTT--------CSSGGGHHHHSCSCCEEEEEEETTEEEEETTBCTTC
T ss_pred CcccCC--------ccCHHHHHHhcCCCCCceEEEECCEEEEECCeeccC
Confidence 544321 25788887553 3699999999999999988643
No 27
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=100.00 E-value=5.8e-36 Score=326.41 Aligned_cols=373 Identities=18% Similarity=0.196 Sum_probs=243.2
Q ss_pred cccEEEEccEEEcCCC----ceeeEEEEECCEEEEeecCCCCC---CCCeEEecCCCEEeeCccccCcCcccccCC----
Q psy6858 18 QNRLLIKNGKVVNADK----ISDLDIYIENGVIQQLGRNLIVP---GGVRVIDAAGSYVIPGGIDPHTHFELELMG---- 86 (592)
Q Consensus 18 ~~~llIkng~Iv~~d~----~~~~dV~I~dG~I~~Ig~~~~~~---~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~---- 86 (592)
.++++|+|++|++.+. ..+++|+|+||+|++||+....+ .+.++||++|++|||||||+|+|+.+....
T Consensus 13 ~~d~li~~~~v~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~~~viD~~g~~v~PGlID~H~Hl~~~~~~g~~~ 92 (472)
T 4dzh_A 13 PCDLLIEAGYVVPIEPHAVVLEDHAVAVSNGVIVAVLPTADARVRFAPARTVSRPDAALMPGLVNAHTHNPMTLLRGVAD 92 (472)
T ss_dssp EEEEEEEEEEECCSSSTTCCEEEEEEEEETTEEEEEEEHHHHHHHEEEEEEEEEEEEEEEECEEEEEECGGGGGGTTSSC
T ss_pred cCcEEEECCEEEecCCCCcEecceEEEEECCEEEEEeCchhhhhcCCCCeEEeCCCcEEEECccccccChhhHHhccccC
Confidence 4789999999997652 34799999999999999854332 367899999999999999999999664321
Q ss_pred ------------------CCChhhHHHHH----HHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeecccc
Q psy6858 87 ------------------ATSVDDFYHGT----KAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVG 144 (592)
Q Consensus 87 ------------------~~~~d~~~~~~----~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 144 (592)
..+.++++.++ ..++++||||+.|+... . +...+.......+..+.++++..
T Consensus 93 ~~~l~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~-----~-~~~~~a~~~~g~r~~~~~~~~~~ 166 (472)
T 4dzh_A 93 DLPLMVWLQQHIWPVEAAVIGPEFVADGTTLAIAEMLRGGTTCVNENYFF-----A-DVQAAVYKQHGFRALVGAVIIDF 166 (472)
T ss_dssp SCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEECSC-----H-HHHHHHHHHTTCEEEEEEEECSS
T ss_pred CCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcccC-----H-HHHHHHHHHhCCeEEEEecccCC
Confidence 13445555433 34788999999998621 1 22222222222234444444321
Q ss_pred ccC---CChHHHHHHHHHHHH-cCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCch-hhhHHHHHHHHHc
Q psy6858 145 ITW---WSDQVQQEMAELCEK-HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENG-EIIDKNTQKLLAA 219 (592)
Q Consensus 145 ~~~---~~~~~~~~~~~lv~~-~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~-~~i~~~~~~~~~~ 219 (592)
... ..++..+++.++++. .+...++..++++..+.++++++.++++.|+++|+++++|+... ..+....+ ..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~e~~~~~~~~~~---~~ 243 (472)
T 4dzh_A 167 PTAWASSDDEYFARAGELHDQWRDDPLISTAFAPHAPYTVNDANFERVRMLADQLDMPVHLHTHETAQEVADSVA---QY 243 (472)
T ss_dssp CCSSCSSHHHHHHHHHHHHHHHTTCSSEEEEEEECCTTTSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHH---HH
T ss_pred CcccccCHHHHHHHHHHHHHHhCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH---Hh
Confidence 111 123445555555543 35566777888888888999999999999999999999998543 21111111 11
Q ss_pred CCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCceeeee-ecccceeecCCC
Q psy6858 220 GIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYG-ETLAAAVGTHAN 298 (592)
Q Consensus 220 G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~-e~~~~~l~~d~~ 298 (592)
|. ++ +... .-....+.+..+.|+..-.. +.++.+++. |+ .+.. ......+ +.
T Consensus 244 g~---------~~-------i~~~-~~~g~~~~~~~~~H~~~l~~-~~i~~l~~~----g~--~v~~~p~s~~~~---~~ 296 (472)
T 4dzh_A 244 GQ---------RP-------LARL-DRLGLVNDRLIAVHMTQLTE-AEIHLCAER----GV--SVVHCPESNLKL---AS 296 (472)
T ss_dssp SS---------CH-------HHHH-HHHTCCSTTEEEEECCSCCH-HHHHHHHHH----TC--EEEECHHHHHHT---TC
T ss_pred CC---------CH-------HHHH-HHcCCCCCCeEEEeccCCCH-HHHHHHHHc----CC--EEEEChHHHHhc---CC
Confidence 11 11 1111 11223455667777764332 335666666 77 4322 1111110 00
Q ss_pred CCCCcccccccceecCCCCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhh
Q psy6858 299 QIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKG 378 (592)
Q Consensus 299 ~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~ 378 (592)
..+ .+..+++.|+.+++|||+...+.....+ -+.++...+.+.
T Consensus 297 -------------~~~----------~~~~~~~~Gv~v~lgtD~~~~~~~~~~~--------------~~~~~a~~~~~~ 339 (472)
T 4dzh_A 297 -------------GFC----------PACALQRASVNLAIGTDGCASNNDLDMF--------------SENRTAAILAKA 339 (472)
T ss_dssp -------------CCC----------CHHHHHHTTCEEEECCCCTTSSCCCCHH--------------HHHHHHHHHHHH
T ss_pred -------------CCc----------cHHHHHHCCCCEEEECCCCcCCCCCCHH--------------HHHHHHHHHhhh
Confidence 011 2447899999999999987543221111 144555545443
Q ss_pred c--cCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEE---eeeee
Q psy6858 379 V--VPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVC---HGVPE 453 (592)
Q Consensus 379 v--~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~---~g~~~ 453 (592)
. ...++++.++++++|.|||++||+++++|+|++|++|||||||.+..... ..++|++.+.. ...|.
T Consensus 340 ~~~~~~~l~~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~--------~~~~~~~~l~~~~~~~~V~ 411 (472)
T 4dzh_A 340 VANDATALDAATTLRAATLGGARALGFGDRIGSIEVGKQADLVCVDLSALETQ--------PLHHVLSQLIYAAGRHQVT 411 (472)
T ss_dssp HHTCTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEECCSGGGC--------SCSCHHHHHHHTCCGGGEE
T ss_pred hcCCCCcCCHHHHHHHHHHHHHHHcCCCCCCcccCCCCcCCEEEEcCCCCccC--------CccCHHHHHhhcCCCCCce
Confidence 3 34579999999999999999999988899999999999999999854432 23466666643 34699
Q ss_pred EEEECCEEEEECCeeeec
Q psy6858 454 YVIVGGRVCVDEGNLRVA 471 (592)
Q Consensus 454 ~Viv~GkvV~~~g~l~~~ 471 (592)
.||++|++||++|+++..
T Consensus 412 ~v~v~G~~v~~~g~~~~~ 429 (472)
T 4dzh_A 412 DVWIAGKPKLVQRELIDM 429 (472)
T ss_dssp EEEETTEEEEETTEETTC
T ss_pred EEEECCEEEEECCEECcC
Confidence 999999999999998653
No 28
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.1e-35 Score=321.85 Aligned_cols=375 Identities=18% Similarity=0.220 Sum_probs=242.8
Q ss_pred cccEEEEccEEEcCC--C--ceeeEEEEECCEEEEeecCCC--CCCCCeEEecCCCEEeeCccccCcCcccccCC-----
Q psy6858 18 QNRLLIKNGKVVNAD--K--ISDLDIYIENGVIQQLGRNLI--VPGGVRVIDAAGSYVIPGGIDPHTHFELELMG----- 86 (592)
Q Consensus 18 ~~~llIkng~Iv~~d--~--~~~~dV~I~dG~I~~Ig~~~~--~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~----- 86 (592)
+++++|+|++|++.+ . ..+++|+|+||+|++||+... .+.+.++||++|++|+|||||+|+|+.+..+.
T Consensus 7 ~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g~~~~ 86 (451)
T 4dyk_A 7 PFDLLLLPTWIVPVEPAGVVLRDHALGIRDGQIALVAPREQAMRHGATEIRELPGMLLAPGLVNAHGHSAMSLFRGLADD 86 (451)
T ss_dssp CEEEEEEEEEECCSSSTTCCEESEEEEEETTEEEEEEEHHHHTTTCEEEEEEEEEEEEEECEEECCCCGGGGGGTTSSCS
T ss_pred hhcEEEECCEEEeeCCCCcEEeccEEEEECCEEEEEeCccccccCCCCeEEeCCCCEEeecccchhhChhhHHhccCCCC
Confidence 579999999999854 2 246999999999999998543 23467999999999999999999999544321
Q ss_pred -----------------CCChhhHHHHHHHH----HcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccc
Q psy6858 87 -----------------ATSVDDFYHGTKAA----VAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGI 145 (592)
Q Consensus 87 -----------------~~~~d~~~~~~~~a----la~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 145 (592)
..++++++.+++.+ +++||||+.|+... ...+.+++. ....+....+.+....
T Consensus 87 ~~l~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~--~~~~~~a~~----~~g~r~~~~~~~~~~~ 160 (451)
T 4dyk_A 87 LPLMTWLQDHIWPAEGQWVSEDFIRDGTELAIAEQVKGGITCFSDMYFY--PQAICGVVH----DSGVRAQVAIPVLDFP 160 (451)
T ss_dssp SCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEECSC--HHHHHHHHH----HHTCEEEEEEEECSSC
T ss_pred CCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcccC--HHHHHHHHH----HcCCeEEEEchhhCCC
Confidence 14556666655544 58999999998432 112222222 2222333333332111
Q ss_pred c---CCChHHHHHHHHHHHH-cCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchh-hhHHHHHHHHHcC
Q psy6858 146 T---WWSDQVQQEMAELCEK-HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGE-IIDKNTQKLLAAG 220 (592)
Q Consensus 146 ~---~~~~~~~~~~~~lv~~-~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~-~i~~~~~~~~~~G 220 (592)
. ...++..++..++++. .+...++..++++..+.++++++.++++.|+++|+++++|+.+.. .+.... ...|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~---~~~g 237 (451)
T 4dyk_A 161 IPGARDSAEAIRQGMALFDDLKHHPRIRIAFGPHAPYTVSDDKLEQILVLTEELDASIQMHVHETAFEVEQAM---ERNG 237 (451)
T ss_dssp BTTBSSHHHHHHHHHHHHHHTTTCSSEEEEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHH---HHHS
T ss_pred CccccCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCccCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHH---HHhC
Confidence 1 1223445555565544 356677888888888889999999999999999999999985532 121111 1112
Q ss_pred CCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCC
Q psy6858 221 IKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQI 300 (592)
Q Consensus 221 ~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~ 300 (592)
.. + + + . +.-....+.+..+.|+..-.. +.++.+++. |+ .+.. ++.+....+
T Consensus 238 ~~---------~--i--~---~-~~~~g~~~~~~~~~H~~~~~~-~~~~~l~~~----g~--~v~~--~p~s~~~~~--- 288 (451)
T 4dyk_A 238 ER---------P--L--A---R-LHRLGLLGPRFQAVHMTQVDN-DDLAMLVET----NS--SVIH--CPESNLKLA--- 288 (451)
T ss_dssp SC---------H--H--H---H-HHHTTCCSTTEEEEECCCCCH-HHHHHHHHH----TC--EEEE--CHHHHHHTT---
T ss_pred CC---------H--H--H---H-HHHCCCCCCCeEEEECCCCCH-HHHHHHHHc----CC--EEEE--Chhhhhhcc---
Confidence 11 0 0 0 1 111223345666777764332 335666666 77 4322 211100000
Q ss_pred CCcccccccceecCCCCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhc-
Q psy6858 301 PCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGV- 379 (592)
Q Consensus 301 ~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v- 379 (592)
...+| +.++++.|+.+++|||+.+.+.....+ -+.++...+.+..
T Consensus 289 ----------~~~~~----------~~~~~~~Gv~v~lgtD~~~~~~~~~~~--------------~~~~~~~~~~~~~~ 334 (451)
T 4dyk_A 289 ----------SGFCP----------VEKLWQAGVNVAIGTDGAASNNDLDLL--------------GETRTAALLAKAVY 334 (451)
T ss_dssp ----------CCCCC----------HHHHHHHTCCEEECCCCGGGSSCCCHH--------------HHHHHHHHHHHHHH
T ss_pred ----------CCccc----------HHHHHhCCCeEEEECCCCccCCCCCHH--------------HHHHHHHHHhhhhc
Confidence 01122 447889999999999987643211111 1444454444433
Q ss_pred -cCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEE---eeeeeEE
Q psy6858 380 -VPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVC---HGVPEYV 455 (592)
Q Consensus 380 -~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~---~g~~~~V 455 (592)
...++++.++++++|.|||++||+++++|+|++|++|||||||.+.....+ .++|++.+.. ...|..|
T Consensus 335 ~~~~~~~~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~~--------~~~~~~~~~~~~~~~~v~~v 406 (451)
T 4dyk_A 335 GQATALDAHRALRMATLNGARALGLERLIGSLEAGKAADLVAFDLSGLAQQP--------VYDPVSQLIYASGRDCVRHV 406 (451)
T ss_dssp TCTTSSCHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEEECCSGGGCS--------CSCHHHHHHHHCCGGGEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHHHcCCCCCCcCcCCCCcCCEEEEeCCCCccCC--------CCCHHHHhhccCCCCCccEE
Confidence 356899999999999999999999888999999999999999998543322 2456665533 3479999
Q ss_pred EECCEEEEECCeeeecC
Q psy6858 456 IVGGRVCVDEGNLRVAQ 472 (592)
Q Consensus 456 iv~GkvV~~~g~l~~~~ 472 (592)
|++|++||++|+++...
T Consensus 407 ~v~G~~v~~~g~~~~~d 423 (451)
T 4dyk_A 407 WVGGRQLLDDGRLLRHD 423 (451)
T ss_dssp EETTEEEEETTEESSSC
T ss_pred EECCEEEEECCEECcCC
Confidence 99999999999997543
No 29
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=100.00 E-value=3e-35 Score=313.37 Aligned_cols=356 Identities=16% Similarity=0.135 Sum_probs=222.0
Q ss_pred ccccccEEEEccEEEcCCCceeeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccC---------
Q psy6858 15 QSSQNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELM--------- 85 (592)
Q Consensus 15 ~~~~~~llIkng~Iv~~d~~~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~--------- 85 (592)
|+++++++|+|++|+|++.. ++|+|+||+|++||+....+ +.++||++|++|+|||||+|+|+.+...
T Consensus 1 ~~~~~~~li~n~~v~~~~~~--~~v~I~~g~I~~vg~~~~~~-~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~ 77 (403)
T 2qt3_A 1 MSKDFDLIIRNAYLSEKDSV--YDIGIVGDRIIKIEAKIEGT-VKDEIDAKGNLVSPGFVDAHTHMDKSFTSTGERLPKF 77 (403)
T ss_dssp --CCEEEEEEEEEETTTTEE--EEEEEETTEEEEEESSCCSC-EEEEEECTTCBEEECEEEEEECGGGTTTTCSSSSCTT
T ss_pred CCcccceEEEeeEecCCCee--EEEEEECCEEEEeecCCCCC-ccceEcCCCCEecccceeeeeccchhhcccccccccc
Confidence 44578999999999987654 89999999999999875433 4589999999999999999999976542
Q ss_pred -CC-C----------------ChhhHHH----HHHHHHcCCeeEEeccccCCC--CccHHHHHHHHHHHhccCceeeeec
Q psy6858 86 -GA-T----------------SVDDFYH----GTKAAVAGGTTTIIDFALPRK--GESLIKTYESWRQKADEKVCCDYAL 141 (592)
Q Consensus 86 -~~-~----------------~~d~~~~----~~~~ala~GtTti~d~~~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~ 141 (592)
+. . +.++++. ..+.++++||||+.++..... +....+.+.+...... ...+...
T Consensus 78 ~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 155 (403)
T 2qt3_A 78 WSRPYTRDAAIEDGLKYYKNATHEEIKRHVIEHAHMQVLHGTLYTRTHVDVDSVAKTKAVEAVLEAKEELK--DLIDIQV 155 (403)
T ss_dssp CSSCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTTEEEEEEEEECSTTTTTHHHHHHHHHHHHHT--TTCEEEE
T ss_pred cCCCcccCcCHHHHHHHhhhcCHHHHHHHHHHHHHHHHHcCCcEEEEEEcccCccccchHHHHHHHHHHhh--cceeEEE
Confidence 11 1 2334444 456778899999987653322 1112233322222211 1111111
Q ss_pred c---ccccCCChHHHHHHHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHH
Q psy6858 142 H---VGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLA 218 (592)
Q Consensus 142 ~---~~~~~~~~~~~~~~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~ 218 (592)
. .......++..+.++++.+ .|...++. +.++..+..+++++.++++.|+++|+++.+|+.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~-~~p~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~-------- 225 (403)
T 2qt3_A 156 VAFAQSGFFVDLESESLIRKSLD-MGCDLVGG-VDPATRENNVEGSLDLCFKLAKEYDVDIDYHIHDIGTVG-------- 225 (403)
T ss_dssp EEECTTCTTTSTTHHHHHHHHHH-TTCSEEEC-BCTTTTTSCHHHHHHHHHHHHHHTTCEEEEEECCCHHHH--------
T ss_pred EEcCCcccccCcchHHHHHHHHh-cCCCeEEE-ecCCCCCCChHHHHHHHHHHHHHcCCCeEEEeCCcccch--------
Confidence 1 0010112223334444433 46554432 234444455668899999999999999999986532100
Q ss_pred cCCCCCCCccCCCcHHHHHHHHHHHHHHhcccC--CCEEEEecccHHH------HHHHHHHHHHHHhcCCceeeeeeccc
Q psy6858 219 AGIKGPEGHQLSRPEEVEAEAVTRACTIANQVD--CPLYVVHIMSKAA------GDAMAYKRKELMKKGKHCTLYGETLA 290 (592)
Q Consensus 219 ~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~--~pl~i~hv~s~~a------~~~i~~ar~~~~~~G~~~~v~~e~~~ 290 (592)
..++...+..+.+.+ .+..+.|+..... .+.++.+++. |+ .+..
T Consensus 226 ------------------~~~~~~~~~~~~~~g~~~~~~i~H~~~~~~~~~~~~~~~~~~l~~~----g~--~v~~---- 277 (403)
T 2qt3_A 226 ------------------VYSINRLAQKTIENGYKGRVTTSHAWCFADAPSEWLDEAIPLYKDS----GM--KFVT---- 277 (403)
T ss_dssp ------------------HHHHHHHHHHHHHTTCTTSEEEEECTHHHHSCHHHHHHHHHHHHHH----TC--EEEE----
T ss_pred ------------------hHHHHHHHHHHHHcCCCCCeEEEehhhhccCChhhHHHHHHHHHHc----CC--EEEE----
Confidence 011222233333344 4788999875443 3566777666 87 3322
Q ss_pred ceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCCCCCcch-h-
Q psy6858 291 AAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGV-Q- 368 (592)
Q Consensus 291 ~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~-e- 368 (592)
+|+++. ....++++++.|+.+++|||+... .| .|+|...+ +
T Consensus 278 ----------------------~p~~~~---~~~~~~~~~~~Gv~v~lgtD~~~~----------~~--~~~g~~~~~~~ 320 (403)
T 2qt3_A 278 ----------------------CFSSTP---PTMPVIKLLEAGINLGCASDNIRD----------FW--VPFGNGDMVQG 320 (403)
T ss_dssp ----------------------ETTTCC---TTCCHHHHHHTTCEEEEECCSCSS----------SS--CSCCCCCHHHH
T ss_pred ----------------------CCCCCC---CCCCHHHHHHcCCcEEEeCCCCCC----------CC--CCCCCCCHHHH
Confidence 122111 122355788999999999998621 11 12232122 2
Q ss_pred hHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEE
Q psy6858 369 DRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVC 448 (592)
Q Consensus 369 ~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~ 448 (592)
.++...+..+ ...+++.++++++|.|||++||++. +|+|++|++|||||||.+. |++....
T Consensus 321 ~~~~~~~~~~--~~~~~~~~al~~~T~~~A~~lg~~~-~g~i~~G~~ADlvv~d~~~----------------~~~~~~~ 381 (403)
T 2qt3_A 321 ALIETQRLEL--KTNRDLGLIWKMITSEGARVLGIEK-NYGIEVGKKADLVVLNSLS----------------PQWAIID 381 (403)
T ss_dssp HHHHHHHTTC--CSHHHHHHHHHHTTHHHHHHHTCGG-GCSSSTTSBCCEEEESSSS----------------HHHHHHH
T ss_pred HHHHHHHhCc--CCccCHHHHHHHHHHHHHHhcCCCc-ccCCCCCCcCCEEEEcCCC----------------hHHHhhc
Confidence 2222222211 1236889999999999999999964 5999999999999999873 2344444
Q ss_pred eeeeeEEEECCEEEEECCeee
Q psy6858 449 HGVPEYVIVGGRVCVDEGNLR 469 (592)
Q Consensus 449 ~g~~~~Viv~GkvV~~~g~l~ 469 (592)
.+.|..||++|++|+++|+++
T Consensus 382 ~~~v~~v~v~G~~v~~~g~~~ 402 (403)
T 2qt3_A 382 QAKRLCVIKNGRIIVKDEVIV 402 (403)
T ss_dssp CCCEEEEEETTEEEEESSSBC
T ss_pred CCCccEEEECCEEEecCCccc
Confidence 557899999999999999874
No 30
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=100.00 E-value=6.2e-36 Score=320.58 Aligned_cols=354 Identities=18% Similarity=0.130 Sum_probs=219.9
Q ss_pred cccEEEEccEEEcCCCc---eeeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccCC-----CCC
Q psy6858 18 QNRLLIKNGKVVNADKI---SDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMG-----ATS 89 (592)
Q Consensus 18 ~~~llIkng~Iv~~d~~---~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~-----~~~ 89 (592)
+++++|+|++|+|++.. .+++|+|+||+|++|+++...+.+.++||++|++|||||||+|+|+...... ...
T Consensus 3 ~~~~~i~n~~v~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~ 82 (423)
T 3feq_A 3 LTITVLQGGNVLDLERGVLLEHHHVVIDGERIVEVTDRPVDLPNAQAIDVRGKTVMPGFIDCHVHVLASNANLGVNATQP 82 (423)
T ss_dssp -CEEEEEEEEEEETTTTEEEEEEEEEEETTEEEEEECSCCCCSSCEEEECTTCEEEECEEEEEECTTCCSSCHHHHHHSC
T ss_pred ceEEEEEccEEEeCCCCcccCCceEEEECCEEEEecCCCCCCCCCeEEeCCCCEECCCeeeeEeeecccCCChhhhhcCC
Confidence 56899999999998743 3689999999999999976666788999999999999999999999766431 112
Q ss_pred hhhHH----HHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeee--------ec----------------
Q psy6858 90 VDDFY----HGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDY--------AL---------------- 141 (592)
Q Consensus 90 ~d~~~----~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~--------~~---------------- 141 (592)
.+..+ ...+.++++||||++|+... ...+.++++... .....+.. +-
T Consensus 83 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~--~~~l~~~~~~~~---~~g~r~~~~g~~~~~~~g~~~~~~~~~~~~~~~~ 157 (423)
T 3feq_A 83 NILAAIRSLPILDAMLSRGFTSVRDAGGA--DWSLMQAVETGL---VSGPRIFPSGKALSQTGGHGDFRPRGDLLEPCSC 157 (423)
T ss_dssp HHHHHHTHHHHHHHHHHTTEEEEEECSSC--CHHHHHHHHTTS---SCSCEEECCCSEEECTTSTTCCCCC---CCCCCS
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeCCCc--hHHHHHHHHcCC---CCCCeEEecCcccccCCCCccccccccccccccc
Confidence 22222 34456689999999998543 223333332211 11111100 00
Q ss_pred ------cccccCCChHHHHHHHHHHHHcCCcEEEEEEe--------eCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchh
Q psy6858 142 ------HVGITWWSDQVQQEMAELCEKHGVNSFKTFMA--------YKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGE 207 (592)
Q Consensus 142 ------~~~~~~~~~~~~~~~~~lv~~~Gv~~~k~~~~--------~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~ 207 (592)
+.......++..+.++++.+ .|+..+|++.. +++...++++++.++++.|+++|+++.+|+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~ 236 (423)
T 3feq_A 158 CFRTGAIARVVDGVEGVRLAVREEIQ-KGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAANTYVMAHAYTGR 236 (423)
T ss_dssp SCCTTCSEEECCSHHHHHHHHHHHHH-TTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCCEEEEEEEHH
T ss_pred cccccccceecCCHHHHHHHHHHHHH-cCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHHHHHHHCCCeEEEEeCChH
Confidence 01112223445555665554 58999999875 3455678999999999999999999999998532
Q ss_pred hhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCceeeeee
Q psy6858 208 IIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGE 287 (592)
Q Consensus 208 ~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e 287 (592)
....+++.|....+ |+.... .+.++.+++. |+ .+...
T Consensus 237 ----~i~~~l~~g~~~i~--------------------------------H~~~~~-~~~~~~l~~~----gv--~~~pt 273 (423)
T 3feq_A 237 ----AIARAVRCGVRTIE--------------------------------HGNLVD-EAAAKLMHEH----GA--FVVPT 273 (423)
T ss_dssp ----HHHHHHHHTCCEEE--------------------------------EEEECC-HHHHHHHHHH----TC--EEECC
T ss_pred ----HHHHHHHcCCCEEe--------------------------------ccCcCC-HHHHHHHHHC----CC--ccccc
Confidence 23333344443322 322111 1233444444 65 33211
Q ss_pred cccceeecCCCCCCCcccccccceecCCCCCC-----CCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCCC
Q psy6858 288 TLAAAVGTHANQIPCTWHDQAAHVLSPPLRPD-----ETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPN 362 (592)
Q Consensus 288 ~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~-----~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~ 362 (592)
........ .........|..+.. ......+..+++.|+.+++|||+.......
T Consensus 274 ~~~~~~~~---------~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~gTD~~~~~~~~------------- 331 (423)
T 3feq_A 274 LVTYDALA---------KHGAEFGMPPESVAKVASVQQKGRESLEIYANAGVKMGFGSDLLGEMHAF------------- 331 (423)
T ss_dssp THHHHHHH---------HHTGGGTCCTTTSSTHHHHHHHHHHHHHHHHHHTCCBCCCCCCCGGGGGG-------------
T ss_pred hHHHHHHH---------hcccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCcc-------------
Confidence 11000000 000000011111100 012345778899999999999986321110
Q ss_pred CCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCc
Q psy6858 363 GVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNI 442 (592)
Q Consensus 363 G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~ 442 (592)
...|.+ .. ... +++.++|+++|.|||++||+++++|+|++|++|||||||.+ |
T Consensus 332 --~~~e~~------~~-~~~-ls~~eal~~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~-----------------p 384 (423)
T 3feq_A 332 --QSGEFR------IR-AEV-LGNLEALRSATTVAAEIVNMQGQLGVIAVGAIADLVVLDGN-----------------P 384 (423)
T ss_dssp --TTHHHH------HH-HTT-SCHHHHHHTTTHHHHHHTTCBTTBSSCCTTSBCCEEEESSC-----------------T
T ss_pred --hHHHHH------HH-Hhh-CCHHHHHHHHHHHHHHHhCCCCCceeECCCCcCCEEEECCC-----------------h
Confidence 001211 12 233 99999999999999999999888999999999999999987 3
Q ss_pred ccCeEEe----eeeeEEEECCEEEEECCeee
Q psy6858 443 FEGLVCH----GVPEYVIVGGRVCVDEGNLR 469 (592)
Q Consensus 443 ~~g~~~~----g~~~~Viv~GkvV~~~g~l~ 469 (592)
++.+... ..|..||++|++|+++++..
T Consensus 385 ~~~~~~~~~~~~~v~~v~~~G~~v~~~~~~~ 415 (423)
T 3feq_A 385 LEDIGVVADEGARVEYVLQRGTLVKRQAAGR 415 (423)
T ss_dssp TTCGGGTSSSTTSEEEEEETTEEEEEC----
T ss_pred hhCHHHHhccCCCceEEEECCEEEeCCcccc
Confidence 3333322 46899999999999998754
No 31
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=100.00 E-value=2.2e-35 Score=317.26 Aligned_cols=356 Identities=19% Similarity=0.189 Sum_probs=223.0
Q ss_pred cccEEEEccEEEcCCC--c-eeeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccCC-----CCC
Q psy6858 18 QNRLLIKNGKVVNADK--I-SDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMG-----ATS 89 (592)
Q Consensus 18 ~~~llIkng~Iv~~d~--~-~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~-----~~~ 89 (592)
+++++|+|++|+|++. . ..++|+|+||+|++|+++...+.+.++||++|++|||||||+|+|+...... ..+
T Consensus 3 m~~~~i~n~~i~~~~~~~~~~~~~i~i~~g~I~~i~~~~~~~~~~~~iD~~g~~v~PGliD~H~H~~~~~~~~~~~~~~~ 82 (426)
T 2r8c_A 3 LTTFLFRNGALLDPDHPDLLQGFEILIEDGFIREVSDKPIKSSNAHVIDVKGKTIMPGLIDLHVHVVAIEFNLPRVATLP 82 (426)
T ss_dssp -CEEEEEEEEECCTTSSSCEEEEEEEEESSBEEEEESSCCCCSSCEEEECTTCEEEECEEEEEECTTCCSSCHHHHHHSC
T ss_pred cccEEEEeeEEEeCCCCcccCCceEEEECCEEEEEcCCCCCCCCCeEEECCCCEEcCCeEeeeeccccccCCchhhccCC
Confidence 5689999999999853 2 3689999999999999875556688999999999999999999999776431 122
Q ss_pred hhhHH----HHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeee--------ecc---------------
Q psy6858 90 VDDFY----HGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDY--------ALH--------------- 142 (592)
Q Consensus 90 ~d~~~----~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~--------~~~--------------- 142 (592)
.++.+ ...+.++++||||++|+.... ..+.++++... .....+.. +-|
T Consensus 83 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~--~~l~~~i~~~~---~~gpri~~~g~~i~~~~g~~~~~~~~~~~~~~~~ 157 (426)
T 2r8c_A 83 NVLVTLRAVPIMRAMLRRGFTTVRDAGGAG--YPFKQAVESGL---VEGPRLFVSGRALSQTGGHADPRARSDYMPPDSP 157 (426)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEEEEECSSCC--HHHHHHHHTTS---SCCCEEEECCSEEECTTSTTCCCCCSSBCCCSCS
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeCCCch--HHHHHHHHcCC---CCCCeEEecCCcccCCCCCccccccccccccccc
Confidence 22222 234566899999999986432 22333322211 01111100 000
Q ss_pred ----------ccccCCChHHHHHHHHHHHHcCCcEEEEEEe--------eCCCcCCCHHHHHHHHHHHHHcCCeEEEecC
Q psy6858 143 ----------VGITWWSDQVQQEMAELCEKHGVNSFKTFMA--------YKGLYMLSDGELYDAFSAIKNLGAIAMVHAE 204 (592)
Q Consensus 143 ----------~~~~~~~~~~~~~~~~lv~~~Gv~~~k~~~~--------~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae 204 (592)
.......++..+.++++++ .|+..+|++.. +.+...++++++.++++.|+++|+++.+|+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~ 236 (426)
T 2r8c_A 158 CGCCVRVGALGRVADGVDEVRRAVREELQ-MGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGRGTYVLAHAY 236 (426)
T ss_dssp SSSBCCTTCCEEECCSHHHHHHHHHHHHH-HTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred ccccccccccccccCCHHHHHHHHHHHHH-cCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHcCCEEEEEeC
Confidence 1111223445556666665 49999999875 3345578999999999999999999999998
Q ss_pred chhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCceee
Q psy6858 205 NGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTL 284 (592)
Q Consensus 205 ~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v 284 (592)
+.. ....+++.|....+|.....++ .++.+++. |+ .+
T Consensus 237 ~~~----~i~~al~~G~~~i~H~~~~~~~---------------------------------~~~~~~~~----gv--~~ 273 (426)
T 2r8c_A 237 TPA----AIARAVRCGVRTIEHGNLIDDE---------------------------------TARLVAEH----GA--YV 273 (426)
T ss_dssp SHH----HHHHHHHTTCSEEEECTTCCHH---------------------------------HHHHHHHT----TC--EE
T ss_pred ChH----HHHHHHHcCCCEEecCCcCCHH---------------------------------HHHHHHHc----CC--eE
Confidence 643 3444555555544443333322 22333333 44 22
Q ss_pred eeecccceeec--CCCCCCCcccccccceecCCCCCC-CCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCC
Q psy6858 285 YGETLAAAVGT--HANQIPCTWHDQAAHVLSPPLRPD-ETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIP 361 (592)
Q Consensus 285 ~~e~~~~~l~~--d~~~~~~~~~~~~~~~~~pplr~~-~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p 361 (592)
........... ......+++.. ..+... ......+..+++.|+.+++|||+........
T Consensus 274 ~pt~~~~~~~~~~~~~~~~~p~~~-------~~~~~~~~~~~~~~~~~~~~Gv~v~lgTD~~~~~~~~~----------- 335 (426)
T 2r8c_A 274 VPTLVTYDALASEGEKYGLPPESI-------AKIADVHGAGLHSIEIMKRAGVKMGFGTDLLGEAQRLQ----------- 335 (426)
T ss_dssp ECCTHHHHHHHHHTTTTTCCHHHH-------TTSTTTGGGHHHHHHHHHHTTCEECCCCCCCGGGGGGT-----------
T ss_pred eechHHHHHHhhhccccCCCHHHH-------HHHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCcch-----------
Confidence 11110000000 00000111000 000000 1234567789999999999999863221100
Q ss_pred CCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCC
Q psy6858 362 NGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYN 441 (592)
Q Consensus 362 ~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~ 441 (592)
..|.+ .. ... +++.++|+++|.|||++||+++++|+|++|++|||||||.+
T Consensus 336 ----~~e~~------~~-~~~-l~~~eal~~aT~~~A~~lg~~~~~G~i~~G~~ADlvvld~~----------------- 386 (426)
T 2r8c_A 336 ----SDEFR------IL-AEV-LSPAEVIASATIVSAEVLGMQDKLGRIVPGAHADVLVVDGN----------------- 386 (426)
T ss_dssp ----THHHH------HH-TTT-SCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSC-----------------
T ss_pred ----HHHHH------HH-Hhc-CCHHHHHHHHHHHHHHHhCCCCCCccCCCCCcCCEEEECCC-----------------
Confidence 01211 12 233 99999999999999999999888999999999999999987
Q ss_pred cccCeEEe----eeeeEEEECCEEEEECCeee
Q psy6858 442 IFEGLVCH----GVPEYVIVGGRVCVDEGNLR 469 (592)
Q Consensus 442 ~~~g~~~~----g~~~~Viv~GkvV~~~g~l~ 469 (592)
|++.+... .+|..||++|++|+++++..
T Consensus 387 p~~~~~~~~~~~~~v~~v~~~G~~v~~~~~~~ 418 (426)
T 2r8c_A 387 PLKSVDCLLGQGEHIPLVMKDGRLFVNELEGH 418 (426)
T ss_dssp TTTCGGGTCSSSTTCCEEEETTEEEEETTC--
T ss_pred hHhCHHHHhCcCCcceEEEECCEEEecccccc
Confidence 33333222 46789999999999998754
No 32
>2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens}
Probab=100.00 E-value=8.2e-36 Score=319.87 Aligned_cols=367 Identities=17% Similarity=0.115 Sum_probs=224.2
Q ss_pred cccEEEEccEEEcCCC---ceeeEEEEE-CCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccCCCCChhhH
Q psy6858 18 QNRLLIKNGKVVNADK---ISDLDIYIE-NGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDF 93 (592)
Q Consensus 18 ~~~llIkng~Iv~~d~---~~~~dV~I~-dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~~~~~d~~ 93 (592)
+++++|+|++|++++. ...++|+|+ ||+|++|++....+.+.++||++|++|+|||||+|+|+..+..... +
T Consensus 14 ~~~~li~n~~vv~~~~~~~~~~~~v~I~~~g~I~~Ig~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~--~-- 89 (417)
T 2ogj_A 14 QAPILLTNVKPVGFGKGASQSSTDILIGGDGKIAAVGSALQAPADTQRIDAKGAFISPGWVDLHVHIWHGGTDIS--I-- 89 (417)
T ss_dssp CCCEEEEEEEECSSCTTCCCSCEEEEECTTSBEEEEETTCCCSSCEEECCC--CEEEECEEEEEECCCBTTBSSC--C--
T ss_pred CCcEEEECCEEEcCCCCccCccceEEEecCCEEEEeccCCCCCCCCeEEECCCCEEccCeeeccccccccccccC--C--
Confidence 3589999999999765 357999999 9999999986543335689999999999999999999976543211 1
Q ss_pred HHHHHHHHcCCeeEEeccccCCCCccHHHHHHH-HHHHhcc--Cceeeeecccccc-----CCC---hHHHHHHHHHHHH
Q psy6858 94 YHGTKAAVAGGTTTIIDFALPRKGESLIKTYES-WRQKADE--KVCCDYALHVGIT-----WWS---DQVQQEMAELCEK 162 (592)
Q Consensus 94 ~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~-~~~~~~~--~~~~~~~~~~~~~-----~~~---~~~~~~~~~lv~~ 162 (592)
+..+.++++||||++|+....+ ...+.+.+ ..+.... ..+++++...... .+. ....++++++++.
T Consensus 90 -~~~~~~l~~GvTtv~d~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~G~~~~~~~~e~~~~~~~~~~~~~~~~~~ 166 (417)
T 2ogj_A 90 -RPSECGAERGVTTLVDAGSAGE--ANFHGFREYIIEPSRERIKAFLNLGSIGLVACNRVPELRDIKDIDLDRILECYAE 166 (417)
T ss_dssp -CGGGTSGGGTEEEEEEESSCCS--TTHHHHHHHTTTTCSSEEEEEEESSTTTTTTTTTSCSCSSGGGCCHHHHHHHHHT
T ss_pred -CHHHHHHhCCcCeEEeCCcCCC--cCHHHHHHHHhhccccCeEEEeccccCcCCCCCCcccccchhhcCHHHHHHHHHh
Confidence 1234578999999999853322 22222322 2222211 1222322111101 111 1123566666654
Q ss_pred c--CCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHH
Q psy6858 163 H--GVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAV 240 (592)
Q Consensus 163 ~--Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav 240 (592)
. ++..+|+++.......++.+.+.++++.|+++|.++.+|+++.....+....+++.| .. ..|...
T Consensus 167 ~~~~~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~l~~g-~~-~~H~~~---------- 234 (417)
T 2ogj_A 167 NSEHIVGLKVRASHVITGSWGVTPVKLGKKIAKILKVPMMVHVGEPPALYDEVLEILGPG-DV-VTHCFN---------- 234 (417)
T ss_dssp CTTTEEEEEEEESHHHHTTCTTHHHHHHHHHHHHHTCCEEEEECSSSSCHHHHHHHCCTT-CE-EETTTC----------
T ss_pred CCCceEEEEEEecCCccccccHHHHHHHHHHHHHcCCcEEEEcCCCcccHHHHHHHhcCC-CE-EEeccC----------
Confidence 2 456788887754345578889999999999999999999975322111111111112 00 011110
Q ss_pred HHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCcccccccceecCCCCCCC
Q psy6858 241 TRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDE 320 (592)
Q Consensus 241 ~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~ 320 (592)
+.+.++.| ......+.+..+++. |+ .+. .++. +. .
T Consensus 235 ----------~~~~~~~~-~~~~~~~~i~~~~~~----g~--~v~--~~~~-----------------------~~---~ 269 (417)
T 2ogj_A 235 ----------GKSGSSIM-EDEDLFNLAERCAGE----GI--RLD--IGHG-----------------------GA---S 269 (417)
T ss_dssp ----------CCTTTCTT-SCHHHHHHHHHC--C----CC--EEE--CCBC-----------------------SS---S
T ss_pred ----------CCccchhc-cCHHHHHHHHHHHhc----Cc--EEE--ecCC-----------------------Cc---c
Confidence 11111112 122334455555444 65 321 1100 00 1
Q ss_pred CCHHHHHHHHhcC-CceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHH
Q psy6858 321 TTPTHLLTLLNEN-ALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAK 399 (592)
Q Consensus 321 ~~~~~l~~~l~~G-~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak 399 (592)
.....++.+++.| +.++++||+. .+.. .+ + ...+...+.+++. .++++.++++++|.|||+
T Consensus 270 ~~~~~~~~~~~~G~~~~~lgtD~~-~~~~---~g--~-----------~~~l~~~~~~~~~-~~l~~~~al~~~T~n~A~ 331 (417)
T 2ogj_A 270 FSFKVAEAAIARGLLPFSISTDLH-GHSM---NF--P-----------VWDLATTMSKLLS-VDMPFENVVEAVTRNPAS 331 (417)
T ss_dssp CCHHHHHHHHHTTCCCSBCCBCBS-TTTT---TT--T-----------CCCHHHHHHHHHH-TTCCHHHHHHTTTHHHHH
T ss_pred ccchHHHHHHHcCCCceEEEcCCC-CCcc---CC--C-----------hhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHH
Confidence 1345778899999 9999999987 5310 00 0 1134444444444 469999999999999999
Q ss_pred HcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEEee----eeeEEEECCEEEEECCeeeecCCCc
Q psy6858 400 IFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHG----VPEYVIVGGRVCVDEGNLRVAQGQG 475 (592)
Q Consensus 400 ~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g----~~~~Viv~GkvV~~~g~l~~~~g~g 475 (592)
+||+++ +|+|++|++|||||||++..+.. ++++.+..+.| +|..||++|++||++|++....
T Consensus 332 ~lgl~~-~G~l~~G~~ADlvv~d~~~~~~~----------~~~~~g~~~~~~~~~~v~~t~v~G~~v~~~~~~~~~~--- 397 (417)
T 2ogj_A 332 VIRLDM-ENRLDVGQRADFTVFDLVDADLE----------ATDSNGDVSRLKRLFEPRYAVIGAEAIAASRYIPRAR--- 397 (417)
T ss_dssp HTTCCC-SSTTSTTSBCEEEEEEEEEEEEE----------EECTTSCEEEEEEEEEEEEEEETTEEEECCCCCCCC----
T ss_pred HhCCCC-CCccCCCCcccEEEEecccCCce----------ecCCCCceEecccccceEEEEECCEEEEeCCccchHH---
Confidence 999966 99999999999999998754321 34577888887 8999999999999999986533
Q ss_pred eeecC
Q psy6858 476 NYLPT 480 (592)
Q Consensus 476 ~~~~~ 480 (592)
++++.
T Consensus 398 ~~~~~ 402 (417)
T 2ogj_A 398 KLVRH 402 (417)
T ss_dssp -----
T ss_pred HHHHH
Confidence 45543
No 33
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=100.00 E-value=2.8e-34 Score=305.66 Aligned_cols=351 Identities=16% Similarity=0.152 Sum_probs=218.2
Q ss_pred cEEEEccEEEcCCCc---eeeEEEEECCEEEEeecCC-CCCCCCeEEecCCCEEeeCccccCcCcccccCCCC------C
Q psy6858 20 RLLIKNGKVVNADKI---SDLDIYIENGVIQQLGRNL-IVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGAT------S 89 (592)
Q Consensus 20 ~llIkng~Iv~~d~~---~~~dV~I~dG~I~~Ig~~~-~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~~~------~ 89 (592)
+++|+|++|+|++.. .+++|+|+||+|++|++.. ..+.+.++||++|++|||||||+|+|+..+..... +
T Consensus 3 ~~~i~~~~i~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~ 82 (403)
T 3gnh_A 3 IKAVSAARLLDVASGKYVDNPLVIVTDGRITSIGKKGDAVPAGATAVDLPGVTLLPGLIDMHVHLDSLAEVGGYNSLEYS 82 (403)
T ss_dssp EEEEEEEEEEETTTTEEEESEEEEEETTEEEEEEETTSCCCTTCEEEEEEEEEEEECEEEEEECTTCCTTCCSGGGGGSC
T ss_pred cEEEEccEEEECCCCcccCCCEEEEECCEEEEEeCCCCCCCCCCeEEECCCCEEcCCeEeeeEccccCcccchhhhhcCC
Confidence 689999999998642 4689999999999999865 44568899999999999999999999976543211 1
Q ss_pred hhhHH----HHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhc-cCcee--------eeecccc------------
Q psy6858 90 VDDFY----HGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKAD-EKVCC--------DYALHVG------------ 144 (592)
Q Consensus 90 ~d~~~----~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~-~~~~~--------~~~~~~~------------ 144 (592)
.+... ..++.++++||||++|+.... .....++....... ..... ..+.|..
T Consensus 83 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~---~~~~~~~~~~~~g~~~gpr~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 159 (403)
T 3gnh_A 83 DRFWSVVQTANAKKTLEAGFTTVRNVGAAD---YDDVGLREAIDAGYVPGPRIVTAAISFGATGGHCDSTFFPPSMDQKN 159 (403)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEEEEECCCST---THHHHHHHHHHTTSSCCCEEEECCSCEESTTSTTSCCSSCGGGCCCC
T ss_pred HHHHHHHHHHHHHHHHhCCeeEEEeCCCCc---cccHHHHHHHHCCCCCCCeEEecCcccccCCCCcccccCchhhcccC
Confidence 22221 234678899999999985431 11222222222211 11111 1112221
Q ss_pred --ccCCChHHHHHHHHHHHHcCCcEEEEEEe--------eCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHH
Q psy6858 145 --ITWWSDQVQQEMAELCEKHGVNSFKTFMA--------YKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQ 214 (592)
Q Consensus 145 --~~~~~~~~~~~~~~lv~~~Gv~~~k~~~~--------~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~ 214 (592)
.....++..+.++++.+ .|...+|+++. +.+...++++++.++++.|+++|+++++|+.... ..+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~-~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~----~i~ 234 (403)
T 3gnh_A 160 PFNSDSPDEARKAVRTLKK-YGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHAHGAS----GIR 234 (403)
T ss_dssp TTCCCSHHHHHHHHHHHHH-TTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEECSHH----HHH
T ss_pred CcccCCHHHHHHHHHHHHH-cCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEeCCHH----HHH
Confidence 11122345556666654 59999999874 3455678999999999999999999999997643 344
Q ss_pred HHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCceeeeeecccceee
Q psy6858 215 KLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVG 294 (592)
Q Consensus 215 ~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~ 294 (592)
.+++.|....+|..+..++ .++.+++. |+ .+...+......
T Consensus 235 ~~~~~g~~~i~H~~~~~~~---------------------------------~~~~~~~~----g~--~~~~~~~~~~~~ 275 (403)
T 3gnh_A 235 EAVRAGVDTIEHASLVDDE---------------------------------GIKLAVQK----GA--YFSMDIYNTDYT 275 (403)
T ss_dssp HHHHTTCSEEEECTTCCHH---------------------------------HHHHHHHH----TC--EEECCCSTHHHH
T ss_pred HHHHhCCCEEecCCcCCHH---------------------------------HHHHHHHC----CC--EEEeeechhhhh
Confidence 4555565544444333332 22333333 44 221111000000
Q ss_pred cC-C-CCCCCc--ccccccceecCCCCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhH
Q psy6858 295 TH-A-NQIPCT--WHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDR 370 (592)
Q Consensus 295 ~d-~-~~~~~~--~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~ 370 (592)
.. . ...++. +...... . ......+..+++.|+.+++|||+...+.. ....|.+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~Gv~v~~gTD~~~~~~~---------------~~~~e~~ 332 (403)
T 3gnh_A 276 QAEGKKNGVLEDNLRKDRDI-G-------ELQRENFRKALKAGVKMVYGTDAGIYPHG---------------DNAKQFA 332 (403)
T ss_dssp HHHHHHHTCCHHHHHHHHHH-H-------HHHHHHHHHHHHHTCEEECCCCBTTBCTT---------------CGGGHHH
T ss_pred hhhccccCCCHHHHHHHHHH-H-------HHHHHHHHHHHHCCCeEEEecCCCCCCCC---------------chHHHHH
Confidence 00 0 000000 0000000 0 01123566789999999999998533211 1111221
Q ss_pred HHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEEee
Q psy6858 371 LSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHG 450 (592)
Q Consensus 371 ~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g 450 (592)
.+. ..+|++.++|+++|.|||++||+++++|+|++|++|||||||.+ |++.+....
T Consensus 333 --~~~-----~~gl~~~~al~~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~-----------------p~~~~~~~~ 388 (403)
T 3gnh_A 333 --VMV-----RYGATPLQAIQSATLTAAEALGRSKDVGQVAVGRYGDMIAVAGD-----------------PLADVTTLE 388 (403)
T ss_dssp --HHH-----HTTCCHHHHHHHTTHHHHHHHTCTTTSSSCCTTSBCCEEEESSC-----------------TTTCGGGGG
T ss_pred --HHH-----HcCCCHHHHHHHHHHHHHHHhCCCCCceeECCCCcCCEEEECCC-----------------hhhCHHHhc
Confidence 111 24799999999999999999999888999999999999999987 333333335
Q ss_pred eeeEEEECCEEEEE
Q psy6858 451 VPEYVIVGGRVCVD 464 (592)
Q Consensus 451 ~~~~Viv~GkvV~~ 464 (592)
+|..||++|++|+.
T Consensus 389 ~v~~v~~~G~~v~~ 402 (403)
T 3gnh_A 389 KPVFVMKGGAVVKA 402 (403)
T ss_dssp SCSEEEETTEEEEC
T ss_pred CcCEEEECCEEEeC
Confidence 78999999999874
No 34
>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A
Probab=100.00 E-value=4.8e-35 Score=315.09 Aligned_cols=368 Identities=14% Similarity=0.109 Sum_probs=225.7
Q ss_pred ccccccEEEEccEEEcCCCceeeEEEEECCEEEEeecCCCCC-CCCeEEecCCCEEeeCccccCcCcccccCC-------
Q psy6858 15 QSSQNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVP-GGVRVIDAAGSYVIPGGIDPHTHFELELMG------- 86 (592)
Q Consensus 15 ~~~~~~llIkng~Iv~~d~~~~~dV~I~dG~I~~Ig~~~~~~-~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~------- 86 (592)
|..+++++|+|++|++++ ..++|+|+||+|++||+....+ .+.++||++|++|||||||+|+|+......
T Consensus 4 ~~~~~~~li~n~~v~~~~--~~~~v~I~~g~I~~vg~~~~~~~~~~~viD~~G~~v~PGlID~H~Hl~~~~~~~~~~~~~ 81 (430)
T 1ra0_A 4 MANNALQTIINARLPGEE--GLWQIHLQDGKISAIDAQSGVMPITENSLDAEQGLVIPPFVEPHIHLDTTQTAGQPNWNQ 81 (430)
T ss_dssp ----CCCEEEEEBCTTCC--SEEEEEEETTEEEEEEEESSCCCCCTTEEECTTCEEESCEEEEEECTTTTTCTTSSSCCS
T ss_pred ccCCCcEEEEeeEecCCC--ceeEEEEECCEEEEeecCCCCCCCCcceEccCCCEecccccccccchhhhhhcCCCcCCC
Confidence 344578999999999976 6789999999999999865443 467899999999999999999999653211
Q ss_pred ----------------CCChhhHHHHHHHH----HcCCeeEEeccccC-CCCccHHHHHHHHHHHhccCceeeeeccc-c
Q psy6858 87 ----------------ATSVDDFYHGTKAA----VAGGTTTIIDFALP-RKGESLIKTYESWRQKADEKVCCDYALHV-G 144 (592)
Q Consensus 87 ----------------~~~~d~~~~~~~~a----la~GtTti~d~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~ 144 (592)
..+.++++.+++.+ +++||||++|+... .+.....+++.+..... +..+++.++. .
T Consensus 82 ~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 159 (430)
T 1ra0_A 82 SGTLFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAMLEVKQEV--APWIDLQIVAFP 159 (430)
T ss_dssp SCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTEEEEEEEEECCSTTCHHHHHHHHHHHHH--TTTCEEEEEEEC
T ss_pred CCCHHHHHHHhHHhhhhcCHHHHHHHHHHHHHHHHhcCccEEeeccccCChHHHHHHHHHHHHHhh--hhhEEEEEEecC
Confidence 12456776655544 68999999998643 22222334333332221 2223333221 0
Q ss_pred c-cCC-ChHHHHHHHHHHHHcCCcEEEEEEeeCCCcC--CCHHHHHHHHHHHHHcCCeEEEecCch-hhhHHHHHHHHHc
Q psy6858 145 I-TWW-SDQVQQEMAELCEKHGVNSFKTFMAYKGLYM--LSDGELYDAFSAIKNLGAIAMVHAENG-EIIDKNTQKLLAA 219 (592)
Q Consensus 145 ~-~~~-~~~~~~~~~~lv~~~Gv~~~k~~~~~~~~~~--~~~~~l~~~~~~a~~~g~~~~vHae~~-~~i~~~~~~~~~~ 219 (592)
. ..+ .+...+.++++.+. |...+. +. .+..+. ++++++.++++.|+++|+++.+|+... ..+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~-g~~~~~-~~-~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~----- 231 (430)
T 1ra0_A 160 QEGILSYPNGEALLEEALRL-GADVVG-AI-PHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVE----- 231 (430)
T ss_dssp TTCSSSSTTHHHHHHHHHHT-TCSEEC-CC-GGGSSSHHHHHHHHHHHHHHHHHHTCEEEEEECCSSCTTCCHHH-----
T ss_pred CcccccCchHHHHHHHHHHh-CCCeEe-ee-ecccccccccHHHHHHHHHHHHHcCCCEEEEECCCCchhHHHHH-----
Confidence 0 011 22334446665543 543322 21 233333 678899999999999999999998542 21111111
Q ss_pred CCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHH------HHHHHHHHHHHhcCCceeeeeecccce-
Q psy6858 220 GIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAG------DAMAYKRKELMKKGKHCTLYGETLAAA- 292 (592)
Q Consensus 220 G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~------~~i~~ar~~~~~~G~~~~v~~e~~~~~- 292 (592)
..+.....+. . +.++.+.|+...... +.++.+++. |+ .+. +++.+
T Consensus 232 ------------------~~~~~~~~~g-~-~~~~~i~H~~~~~~~~~~~~~~~i~~~~~~----gv--~v~--~~p~~~ 283 (430)
T 1ra0_A 232 ------------------TVAALAHHEG-M-GARVTASHTTAMHSYNGAYTSRLFRLLKMS----GI--NFV--ANPLVN 283 (430)
T ss_dssp ------------------HHHHHHHHHT-C-GGGEEEEECGGGGGSCHHHHHHHHHHHHHH----TC--EEE--ECHHHH
T ss_pred ------------------HHHHHHHHhC-C-CCCEEEEeccccccCChHhHHHHHHHHHHc----CC--EEE--ECchhh
Confidence 0011122222 2 567888887743322 577788777 87 442 23221
Q ss_pred eecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCCCCC--cchhhH
Q psy6858 293 VGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGV--NGVQDR 370 (592)
Q Consensus 293 l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~--~g~e~~ 370 (592)
+.+.. . +...|+.+. ...++++++.|+.+++|||+++.+.. |.+. .--+.+
T Consensus 284 ~~~~~-~----------~~~~p~~~~----~~~~~~~~~~Gv~~~lgTD~~~~~~~------------~~~~~~~~~~~~ 336 (430)
T 1ra0_A 284 IHLQG-R----------FDTYPKRRG----ITRVKEMLESGINVCFGHDGVFDPWY------------PLGTANMLQVLH 336 (430)
T ss_dssp HHHTT-T----------TCCSSCCCC----CCCHHHHHHTTCCEEECCBCSSBTTB------------SCCCCCHHHHHH
T ss_pred hhhcc-c----------cCCCCCcCC----CCCHHHHHHCCCEEEEeCCCCcccCC------------CCCCCCHHHHHH
Confidence 11110 0 111344332 22356889999999999999741100 0000 011334
Q ss_pred HHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEEee
Q psy6858 371 LSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHG 450 (592)
Q Consensus 371 ~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g 450 (592)
+...+.+++ .++++.++++++|.|||++||++ + |+|++|++|||||||++.+.. .+...+
T Consensus 337 ~~~~~~~~~--~~~~~~~al~~~T~~~A~~lg~~-~-G~i~~G~~ADlvv~d~~~~~~----------------~~~~~~ 396 (430)
T 1ra0_A 337 MGLHVCQLM--GYGQINDGLNLITHHSARTLNLQ-D-YGIAAGNSANLIILPAENGFD----------------ALRRQV 396 (430)
T ss_dssp HHHHHTTCC--SHHHHHGGGGGGTHHHHHHTTCS-S-CSSCTTSBCCEEEESSSSHHH----------------HHHHTC
T ss_pred HHHHHHccC--CcccHHHHHHHHHHHHHHHhCCC-C-cccCCCCcCCEEEEcCCChhH----------------HHhccC
Confidence 444443322 23589999999999999999996 4 999999999999999874321 011245
Q ss_pred eeeEEEECCEEEEECCeee
Q psy6858 451 VPEYVIVGGRVCVDEGNLR 469 (592)
Q Consensus 451 ~~~~Viv~GkvV~~~g~l~ 469 (592)
.|..||++|++||++|++.
T Consensus 397 ~v~~v~~~G~~v~~~~~~~ 415 (430)
T 1ra0_A 397 PVRYSVRGGKVIASTQPAQ 415 (430)
T ss_dssp CCSEEEETTEEEEECCCCC
T ss_pred cceEEEECCEEEecCCcce
Confidence 7889999999999999875
No 35
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=2.1e-34 Score=314.48 Aligned_cols=379 Identities=13% Similarity=0.015 Sum_probs=233.5
Q ss_pred cEEEEccEEEcCCC---------------ceeeEEEEECCEEEEeecCCCCC---CCCeEEecCCCEEeeCccccCcCcc
Q psy6858 20 RLLIKNGKVVNADK---------------ISDLDIYIENGVIQQLGRNLIVP---GGVRVIDAAGSYVIPGGIDPHTHFE 81 (592)
Q Consensus 20 ~llIkng~Iv~~d~---------------~~~~dV~I~dG~I~~Ig~~~~~~---~~~~vIDa~G~~V~PG~ID~HtH~~ 81 (592)
.++|.+|+|+++.. ..+++|+|+||+|++||+....+ .+.++||++|++|||||||+|+|+.
T Consensus 4 ~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~V~I~~G~I~~Vg~~~~~~~~~~~~~viD~~G~~v~PG~ID~H~Hl~ 83 (475)
T 2ood_A 4 TTVGIRGTFFDFVDDPWKHIGNEQAAARFHQDGLMVVTDGVIKAFGPYEKIAAAHPGVEITHIKDRIIVPGFIDGHIHLP 83 (475)
T ss_dssp CEEEEEEEEEEESSCGGGSTTCGGGGEEEEEEEEEEEESSBEEEEEEHHHHHHHSTTCEEEEEEEEEEEECEEEEEEEGG
T ss_pred cceEEEEEEEecCCccccccccCCCcceEEECCEEEEECCEEEEEeChhhhccccCCCeEEeCCCcEEecceecCcccHH
Confidence 45788999998543 24789999999999999753321 3668999999999999999999985
Q ss_pred cccC----CC-----------------CChhhH----HHHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCce
Q psy6858 82 LELM----GA-----------------TSVDDF----YHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVC 136 (592)
Q Consensus 82 ~~~~----~~-----------------~~~d~~----~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~ 136 (592)
+..+ +. .+.+++ ..+++.++++||||++|+... .....+.+.+.......+..
T Consensus 84 ~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~~~--~~~~~~~~~~~~~~~g~r~~ 161 (475)
T 2ood_A 84 QTRVLGAYGEQLLPWLQKSIYPEEIKYKDRNYAREGVKRFLDALLAAGTTTCQAFTSS--SPVATEELFEEASRRNMRVI 161 (475)
T ss_dssp GTTCTTCCSCCHHHHHHHHTHHHHGGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCS--SHHHHHHHHHHHHHHTCCEE
T ss_pred hHhhcCCCCCCHHHHHHHhccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEEeccc--CchhHHHHHHHHHHcCCeEE
Confidence 4321 10 023444 345778899999999997432 11222222222222222222
Q ss_pred eeeecccc---cc----CCChHHHHHHHHHHHH-cCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc-CCeEEEecCch-
Q psy6858 137 CDYALHVG---IT----WWSDQVQQEMAELCEK-HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL-GAIAMVHAENG- 206 (592)
Q Consensus 137 ~~~~~~~~---~~----~~~~~~~~~~~~lv~~-~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~~~vHae~~- 206 (592)
++.+.. .+ ...++..+++.++++. .+...++..++++..+.++++.+.++++.|+++ |+++++|+...
T Consensus 162 --~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~g~~v~~H~~e~~ 239 (475)
T 2ood_A 162 --AGLTGIDRNAPAEFIDTPENFYRDSKRLIAQYHDKGRNLYAITPRFAFGASPELLKACQRLKHEHPDCWVNTHISENP 239 (475)
T ss_dssp --ECCEECCSSSCTTTCCCHHHHHHHHHHHHHHHTTBTTEEEEEEECBGGGCCHHHHHHHHHHHHHCTTSEEEEECSCCH
T ss_pred --EEeeecccCCCcccccCHHHHHHHHHHHHHHhccCCceEEEEeccccCcCCHHHHHHHHHHHHhCCCCcEEEeeCCCh
Confidence 221111 11 1122344556666653 244456777777777788999999999999999 99999998643
Q ss_pred hhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCceeeee
Q psy6858 207 EIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYG 286 (592)
Q Consensus 207 ~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~ 286 (592)
..+....+ ..|.. ..+ + + .+.-....+.+..+.|+..-.. +.++.+++. |+ .+
T Consensus 240 ~~~~~~~~---~~g~~-------~~~--~--~----~~~~~g~~~~~~~i~H~~~~~~-~~i~~~~~~----g~--~~-- 292 (475)
T 2ood_A 240 AECSGVLV---EHPDC-------QDY--L--G----VYEKFDLVGPKFSGGHGVYLSN-NEFRRMSKK----GA--AV-- 292 (475)
T ss_dssp HHHHHHHH---HCTTC-------SSH--H--H----HHHTTTCCSTTEEEECCTTCCH-HHHHHHHHH----TC--EE--
T ss_pred HHHHHHHH---HcCCC-------ccH--H--H----HHHHcCCCCCCcEEEEeecCCH-HHHHHHHHc----CC--EE--
Confidence 21221111 11110 000 0 1 1111123456666777664332 456667666 77 33
Q ss_pred ecccceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCCc--eEEeCCCCCCChhhhhcCCCCCCcCCCCC
Q psy6858 287 ETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENAL--QTTGSDNCTFNKNQKELGKDSFTHIPNGV 364 (592)
Q Consensus 287 e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~--~~~gsD~~~~~~~~~~~g~~~f~~~p~G~ 364 (592)
..++.+-.. +. ...+| ++++++.|+. +++|||+++.+.. . .|.
T Consensus 293 ~~~P~~~~~--------l~-----~~~~~----------~~~~~~~Gv~~~~~lgTD~~~~~~~-~-----~~~------ 337 (475)
T 2ood_A 293 VFCPCSNLF--------LG-----SGLFR----------LGRATDPEHRVKMSFGTDVGGGNRF-S-----MIS------ 337 (475)
T ss_dssp EECHHHHHH--------TT-----CCCCC----------HHHHTCTTSCCEEEECCCBTTBSCC-C-----HHH------
T ss_pred EEChhhhhh--------cc-----cCcCC----------HHHHHhCCCCCcEEEEccCCCCCCc-C-----HHH------
Confidence 222221000 00 01223 4478999999 9999999763211 0 010
Q ss_pred cchhhHHHHHHHh-----hcc-------------CCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCce
Q psy6858 365 NGVQDRLSVIWEK-----GVV-------------PGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAK 426 (592)
Q Consensus 365 ~g~e~~~~~~~~~-----~v~-------------~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~ 426 (592)
+.+....+++ ... ..++++.++++++|.|||++||+++++|+|++|++|||||||++..
T Consensus 338 ---~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~GsL~~Gk~ADlvvld~~~~ 414 (475)
T 2ood_A 338 ---VLDDAYKVGMCNNTLLDGSIDPSRKDLAEAERNKLSPYRGFWSVTLGGAEGLYIDDKLGNFEPGKEADFVALDPNGG 414 (475)
T ss_dssp ---HHHHHHHHHHHHHHHSSSSSCGGGCCHHHHHHTCCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEECTTCS
T ss_pred ---HHHHHHHHhcccchhccCCcccccccccccccCCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCccCEEEEeCCCc
Confidence 2222222221 111 2689999999999999999999988899999999999999999865
Q ss_pred EEecCCccc------c----cCCCCcccCeEE---eeeeeEEEECCEEEEECCe
Q psy6858 427 RTISAKTHA------H----ACDYNIFEGLVC---HGVPEYVIVGGRVCVDEGN 467 (592)
Q Consensus 427 ~~i~~~~~~------~----~~~~~~~~g~~~---~g~~~~Viv~GkvV~~~g~ 467 (592)
..++....+ + ...++||+++.+ .++|..||++||+||++.+
T Consensus 415 ~~~~~~~~~~~~~~~s~~~~~~~~~p~~~~~~~~~~~~V~~t~v~G~~v~~~~~ 468 (475)
T 2ood_A 415 QLAQPWHQSLIADGAGPRTVDEAASMLFAVMMVGDDRCVDETWVMGKRLYKKSE 468 (475)
T ss_dssp STTHHHHHTTC--CCSCCSHHHHHHHHHHHHHHCCGGGEEEEEETTEEEEECC-
T ss_pred cccccccccccccccccccccchhhHHHHHHhhCCCCCeeEEEECCEEEEECCC
Confidence 543322111 1 113678888877 4689999999999999864
No 36
>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=4.9e-34 Score=307.99 Aligned_cols=374 Identities=16% Similarity=0.067 Sum_probs=227.3
Q ss_pred cccEEEEccEEEcCCC-----ceeeEEEEECCEEEEeecCCCCC-CCCeEEecCCCEEeeCccccCcCcccccCCC----
Q psy6858 18 QNRLLIKNGKVVNADK-----ISDLDIYIENGVIQQLGRNLIVP-GGVRVIDAAGSYVIPGGIDPHTHFELELMGA---- 87 (592)
Q Consensus 18 ~~~llIkng~Iv~~d~-----~~~~dV~I~dG~I~~Ig~~~~~~-~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~~---- 87 (592)
+.+++|+|++|++++. ..+++|+|+||+|++|+++...+ .+.++||++|++|+|||||+|+|+.......
T Consensus 8 m~~~li~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~ig~~~~~~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~g~~~~ 87 (439)
T 2i9u_A 8 INLKIFKGNLIFTKTSDKFTIMKDSYIVVIDGKIASVSSNLPDKYKGNPIIDFRNNIIIPGMNDLHAHASQYKNLGIGMD 87 (439)
T ss_dssp -CEEEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEEESSCCGGGTTSCEEEEEEEEEEECEEEEEEEGGGGGGTTCCCS
T ss_pred cccEEEEeeEEEecCCccceEEeccEEEEECCEEEEecccccccCCCceEEcCCCeEEEecceecccccchHhhhCCcCC
Confidence 5689999999998762 24789999999999999754321 3568999999999999999999997643211
Q ss_pred C------------------ChhhHHHH----HHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeee---cc
Q psy6858 88 T------------------SVDDFYHG----TKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYA---LH 142 (592)
Q Consensus 88 ~------------------~~d~~~~~----~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~---~~ 142 (592)
. +.++++.+ .+.++++||||++|+.... .+.....++...... .+....+. .+
T Consensus 88 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~-~~~~~~~~~~~~~~g-~r~~~~~~~~~~~ 165 (439)
T 2i9u_A 88 KELLPWLNNYTFPEEAKFLNVDYAKKTYGRLIKDLIKNGTTRVALFATLH-KDSTIELFNMLIKSG-IGAYVGKVNMDYN 165 (439)
T ss_dssp SCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSC-HHHHHHHHHHHHHHT-CEEEEECEECCSS
T ss_pred CCHHHHHHhcccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEEccccc-cchHHHHHHHHHHcC-CEEEEEeeecccc
Confidence 0 23344443 3578899999999974321 111223333333322 12211111 11
Q ss_pred cc--ccCCChHHHHHHHHHHHHc--CCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHH
Q psy6858 143 VG--ITWWSDQVQQEMAELCEKH--GVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLA 218 (592)
Q Consensus 143 ~~--~~~~~~~~~~~~~~lv~~~--Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~ 218 (592)
.. .....+...++..++++.. +...++.+++++....++++++.++++.|+++|+++.+|+.+... .....++
T Consensus 166 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~---~~~~~~~ 242 (439)
T 2i9u_A 166 CPDYLTENYITSLNDTEEIILKYKDKSNIVKPIITPRFVPSCSNELMDGLGKLSYKYRLPVQSHLSENLD---EIAVVKS 242 (439)
T ss_dssp CCTTSCCCHHHHHHHHHHHHHHHTTTCSSEEECBEECCGGGCCHHHHHHHHHHHHHHTCCEEEEESCCHH---HHHHHHH
T ss_pred CCcccchhHHHHHHHHHHHHHHHhCCCCceEEEEecCCcCcCCHHHHHHHHHHHHhcCCcEEEeecCChH---HHHHHHH
Confidence 11 0111112344555665532 334567777766666789999999999999999999999975421 1111111
Q ss_pred -cCCCCCCCccCCCcHHHHHHHHHHHHHHhcccC-CCEEEEecccHHHHHHHHHHHHHHHhcCCceeeeeecccceeecC
Q psy6858 219 -AGIKGPEGHQLSRPEEVEAEAVTRACTIANQVD-CPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTH 296 (592)
Q Consensus 219 -~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~-~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d 296 (592)
.|. +|..++. . .-....+ .+..+.|+..-.. +.++.+++. |+ .+ ++++.+...
T Consensus 243 ~~~~---------~~~~~~~-----~-~~~g~~~~~~~~i~H~~~~~~-~~~~~l~~~----g~--~~--~~~p~~~~~- 297 (439)
T 2i9u_A 243 LHKK---------SNFYGEV-----Y-DKFGLFGNTPTLMAHCIHSSK-EEINLIKRN----NV--TI--VHCPTSNFN- 297 (439)
T ss_dssp HCTT---------CSSHHHH-----H-HHTTCSSSSCEEEEECCSCCH-HHHHHHHHT----TC--EE--EECHHHHHH-
T ss_pred HhCC---------CCCHHHH-----H-HHcCCCCCCCeEEEEEecCCH-HHHHHHHHc----CC--EE--EECccchhh-
Confidence 111 1112221 1 1112223 4455666553221 245555555 76 33 233321100
Q ss_pred CCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHH
Q psy6858 297 ANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWE 376 (592)
Q Consensus 297 ~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~ 376 (592)
+. ...+| ++.+++.|+.+++|||+.+.+ .... | -+.++...++
T Consensus 298 -------l~-----~~~~~----------~~~~~~~Gv~~~lgtD~~~~~-~~~~-----~---------~~~~~~~~~~ 340 (439)
T 2i9u_A 298 -------LG-----SGMMP----------VRKYLNLGINVVLGSDISAGH-TCSL-----F---------KVIAYAIQNS 340 (439)
T ss_dssp -------TT-----CCCCC----------HHHHHHTTCEEEECCCBTTBC-CSCH-----H---------HHHHHHHHHH
T ss_pred -------cc-----cccCC----------HHHHHHCCCcEEEecCCCCCC-CcCH-----H---------HHHHHHHHHh
Confidence 00 01233 336899999999999997621 1000 0 1444444444
Q ss_pred hhc------cCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEEee
Q psy6858 377 KGV------VPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHG 450 (592)
Q Consensus 377 ~~v------~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g 450 (592)
+.+ ...++++.++++++|.|||++|| ++|+|++|++|||||||++..+..+ ...++||+++.+.+
T Consensus 341 ~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg---~~Gsl~~G~~ADlvvld~~~~~~~~------~~~~~~~~~~~~~~ 411 (439)
T 2i9u_A 341 KIKWQESGKKDMFLSTSEAFYMATKKGGSFFG---KVGSFEEGYDFDALVINDSNLYPED------YDLTERLERFIYLG 411 (439)
T ss_dssp HHHHHHTTSCSCCCCHHHHHHHHTHHHHTTTS---SCSSCSTTCBCCEEEECCTTSCGGG------SCHHHHHHHHHHHC
T ss_pred ccccccccCCCCCCCHHHHHHHHHHHHHHHhc---cCCccCCCCccCEEEEeCCCccccC------CCccCHHHHheecC
Confidence 433 35789999999999999999999 5999999999999999998655441 12256777766555
Q ss_pred ---eeeEEEECCEEEEECCe
Q psy6858 451 ---VPEYVIVGGRVCVDEGN 467 (592)
Q Consensus 451 ---~~~~Viv~GkvV~~~g~ 467 (592)
+|..||++|++||++++
T Consensus 412 ~~~~v~~v~v~G~~v~~~~~ 431 (439)
T 2i9u_A 412 DDRNIMKRYVCGNEIFGPKF 431 (439)
T ss_dssp CGGGEEEEEETTEEEC----
T ss_pred CCCCeeEEEECCEEEeeCCC
Confidence 89999999999998864
No 37
>3hpa_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified}
Probab=100.00 E-value=7.4e-33 Score=299.39 Aligned_cols=383 Identities=19% Similarity=0.235 Sum_probs=222.7
Q ss_pred ccccEEEEccEEE-cCC--C--ceeeEEEEECCEEEEeecCCCCC-CCCeEEecCCCEEeeCccccCcCcccccCC----
Q psy6858 17 SQNRLLIKNGKVV-NAD--K--ISDLDIYIENGVIQQLGRNLIVP-GGVRVIDAAGSYVIPGGIDPHTHFELELMG---- 86 (592)
Q Consensus 17 ~~~~llIkng~Iv-~~d--~--~~~~dV~I~dG~I~~Ig~~~~~~-~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~---- 86 (592)
.+.++||||++|| +.| . ..++||+|+||||++||++.+.+ .+.+|||++|++|||||||+|+|+.+....
T Consensus 27 ~p~~llI~na~vi~T~D~~~~vi~~gdV~I~dgrI~aVG~~~~~~~~~~~vIDa~G~~v~PG~ID~H~H~~~~~~~g~~~ 106 (479)
T 3hpa_A 27 RPKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELPETADEVLDLRGHLVIPGLVNTHHHMYQSLTRAVPA 106 (479)
T ss_dssp --CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGSCSCCSEEEECTTEEEEECEEECCCCGGGGGSCSCTT
T ss_pred CCCCEEEECCEEEEeeCCCCCEEcCcEEEEECCEEEEEeCCccCCCCCCeEEECCCCEEeeCceeHhhCcchhccccccc
Confidence 3468999999976 433 2 24799999999999999876554 467999999999999999999998543221
Q ss_pred ------------------CCChhhHH----HHHHHHHcCCeeEEeccccCCC-CccHHHHHHHHHHHhccCceeeeeccc
Q psy6858 87 ------------------ATSVDDFY----HGTKAAVAGGTTTIIDFALPRK-GESLIKTYESWRQKADEKVCCDYALHV 143 (592)
Q Consensus 87 ------------------~~~~d~~~----~~~~~ala~GtTti~d~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~ 143 (592)
....++.+ .+...++..|+|++.++..... +..+.......................
T Consensus 107 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 186 (479)
T 3hpa_A 107 AQNAELFGWLTNLYKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDSIGAAQRIGMRFHASRGAMSV 186 (479)
T ss_dssp TTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCBCCCCTTCCHHHHHHHHHHHTCEEEEEEEECC-
T ss_pred CCCcchHHHHhhhhhhhhhcCHHHHHHHHHHHHHHHHHhCCceecceeeeccchhhHHHHHHHHHHhcchhhhhhheeec
Confidence 12222222 2344567899999998764332 233333333333322211111111100
Q ss_pred c----------ccCCChHHHHHHHHHHHH---cC-CcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhh
Q psy6858 144 G----------ITWWSDQVQQEMAELCEK---HG-VNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEII 209 (592)
Q Consensus 144 ~----------~~~~~~~~~~~~~~lv~~---~G-v~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i 209 (592)
. .........++..++... .+ ........+.......+.+.+.++...+.+.|..+.+|.......
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~h~~~~~~~ 266 (479)
T 3hpa_A 187 GQRDGGLPPDSVVEREPDILRDTQRLIETYHDEGRYAMLRVVVAPCSPFSVSRDLMRDAAVLAREYGVSLHTHLAENVND 266 (479)
T ss_dssp ---------------CHHHHHHHHHHHHHHCCCSTTCSEEEEEEESCTTTSCHHHHHHHHHHHHHHTCEEEEEESCSHHH
T ss_pred cccccCCCchhhhhhhhhHHHHHHHHHHHhhhhcccccceeEecccccccCCHHHHHHHHHHHHhcCCeEEeecccchHH
Confidence 0 011122223333333322 11 122334445666777899999999999999999999997543211
Q ss_pred HHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCceeeeeecc
Q psy6858 210 DKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETL 289 (592)
Q Consensus 210 ~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~ 289 (592)
........|.. + +... .-....+....+.|.......+ +...++. +. .+.. +
T Consensus 267 --~~~~~~~~g~~---------~-------~~~~-~~~~~~~~~~~~~h~~~~~~~~-~~~~~~~----~~--~~~~--~ 318 (479)
T 3hpa_A 267 --IAYSREKFGMT---------P-------AEYA-EDLGWVGHDVWHAHCVQLDDAG-IGLFART----GT--GVAH--C 318 (479)
T ss_dssp --HHC-------C---------H-------HHHH-HHTTCCSTTEEEEECTTCCHHH-HHHHHHH----TC--EEEE--C
T ss_pred --HHHHHHHcCCc---------h-------HHHH-hhhccccccceeeeeEecchhH-HHHHHhc----CC--ceee--c
Confidence 00000000100 0 0111 1122334456666665332222 2223333 44 2111 1
Q ss_pred cceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhh
Q psy6858 290 AAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQD 369 (592)
Q Consensus 290 ~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~ 369 (592)
+......+. ..+| ...++..|..+.+|+|....+... ....+.
T Consensus 319 p~~~~~~~~-------------~~~~----------~~~~~~~~~~v~~gtD~~~~~~~~--------------~~~~~~ 361 (479)
T 3hpa_A 319 PCSNMRLAS-------------GIAP----------VKKMRLAGVPVGLGVDGSASNDGA--------------QMVAEV 361 (479)
T ss_dssp HHHHHHTTC-------------CCCC----------HHHHHHHTCCEEECCCCTTSSCCC--------------CHHHHH
T ss_pred ccccccccc-------------Cccc----------hhHHHhcCCcEEeeccccccCCCc--------------cHHHHH
Confidence 111000000 0111 235778899999999986544221 122244
Q ss_pred HHHHHH-HhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEE
Q psy6858 370 RLSVIW-EKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVC 448 (592)
Q Consensus 370 ~~~~~~-~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~ 448 (592)
++..++ .......+|++.++|+++|.|||++||+ +++|+|++|++|||||||++.+... ....+|+.++.+
T Consensus 362 ~~~~~~~~~~~~~~~ls~~eal~~~T~~~A~~lgl-~~~G~I~~G~~ADlvv~D~~~~~~~-------~~~~dp~~~lv~ 433 (479)
T 3hpa_A 362 RQALLLQRVGFGPDAMTAREALEIATLGGAKVLNR-DDIGALKPGMAADFAAFDLRQPLFA-------GALHDPVAALVF 433 (479)
T ss_dssp HHHHHHHHHHHCTTSCCHHHHHHHTTHHHHHHHTC-SSSSSCSTTSBCCEEEEETTSGGGT-------TCTTSHHHHHHH
T ss_pred HHHHHHHhhhccccCCCHHHHHHHHHHHHHHHhCC-CCCccCCCCCcCCEEEEcCCCcccc-------CCccCHHHHhhc
Confidence 443333 3345667899999999999999999999 5799999999999999999855432 223567655432
Q ss_pred --eeeeeEEEECCEEEEECCeeeecC
Q psy6858 449 --HGVPEYVIVGGRVCVDEGNLRVAQ 472 (592)
Q Consensus 449 --~g~~~~Viv~GkvV~~~g~l~~~~ 472 (592)
.+.+.+||++||+||+||+++...
T Consensus 434 ~~~~~v~~tiV~G~~V~~dG~~~~~D 459 (479)
T 3hpa_A 434 CAPSQTAYTVVNGKVVVREGRLATLD 459 (479)
T ss_dssp SSCCCCSEEEETTEEEEETTEECSSC
T ss_pred cCCCCceEEEECCEEEEECCcCCCCC
Confidence 457899999999999999997643
No 38
>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A
Probab=100.00 E-value=1e-34 Score=310.01 Aligned_cols=348 Identities=19% Similarity=0.206 Sum_probs=220.7
Q ss_pred EEEEccEEEcCCC--ceeeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccCC------------
Q psy6858 21 LLIKNGKVVNADK--ISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMG------------ 86 (592)
Q Consensus 21 llIkng~Iv~~d~--~~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~------------ 86 (592)
++|+|++|++++. ...++|+|+||+|++||+.. + +.+ ||++|++|+|||||+|+|+......
T Consensus 1 ~li~n~~v~~~~~~~~~~~~v~I~~g~I~~vg~~~--~-~~~-iD~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~ 76 (406)
T 1p1m_A 1 MIIGNCLILKDFSSEPFWGAVEIENGTIKRVLQGE--V-KVD-LDLSGKLVMPALFNTHTHAPMTLLRGVAEDLSFEEWL 76 (406)
T ss_dssp CEEEEEEECCSTTSCCEEEEEEEETTEEEEEEESS--C-CCS-EECTTEEEEECEEEEEECGGGGGGTTSSCSCCHHHHH
T ss_pred CEEEccEEEecCccccccceEEEECCEEEEeeCCC--C-cce-ecCCCcEEeecccchhhccchhhhccccCCCCHHHHH
Confidence 4899999998753 56799999999999999864 2 457 9999999999999999999654321
Q ss_pred ---------CCChhhHHHHH----HHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChHHH
Q psy6858 87 ---------ATSVDDFYHGT----KAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQ 153 (592)
Q Consensus 87 ---------~~~~d~~~~~~----~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (592)
..+.++++.++ +.++++||||++|+... ....++..... ..+....+++ .......++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~-----~~~~~~~~~~~-g~r~~~~~~~-~~~~~~~~~~~ 149 (406)
T 1p1m_A 77 FSKVLPIEDRLTEKMAYYGTILAQMEMARHGIAGFVDMYFH-----EEWIAKAVRDF-GMRALLTRGL-VDSNGDDGGRL 149 (406)
T ss_dssp HTTHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEEEEESS-----HHHHHHHHHHH-CCEEEEEEEE-CCBTTBCTTHH
T ss_pred HhhhccchhcCCHHHHHHHHHHHHHHHHhcCcEEEEechhC-----HHHHHHHHHHc-CCEEEEEccc-ccCCCCHHHHH
Confidence 13566666655 45678999999997531 22222222222 1122222211 11111223344
Q ss_pred HHHHHHHHH-cCC-cEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecC-chhhhHHHHHHHHHcCCCCCCCccCC
Q psy6858 154 QEMAELCEK-HGV-NSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAE-NGEIIDKNTQKLLAAGIKGPEGHQLS 230 (592)
Q Consensus 154 ~~~~~lv~~-~Gv-~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae-~~~~i~~~~~~~~~~G~~~p~~~~~s 230 (592)
++..++++. .+. ..++..++++..+.++++++.++++.|+++|+++++|+. +...+....+. +..|
T Consensus 150 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~-~~~g---------- 218 (406)
T 1p1m_A 150 EENLKLYNEWNGFEGRIFVGFGPHSPYLCSEEYLKRVFDTAKSLNAPVTIHLYETSKEEYDLEDI-LNIG---------- 218 (406)
T ss_dssp HHHHHHHHHHTTGGGTEEEEEEECCTTTSCHHHHHHHHHHHHHTTCCEEEEESCSTTCCCCTHHH-HTTT----------
T ss_pred HHHHHHHHHhhCCCCcEEEEEecCccCcCCHHHHHHHHHHHHHCCCcEEEEcCCCchHHHHHHHh-hhCC----------
Confidence 444444443 222 346677777777778999999999999999999999985 32211110000 0000
Q ss_pred CcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCceeeeeeccccee---ecCCCCCCCccccc
Q psy6858 231 RPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAV---GTHANQIPCTWHDQ 307 (592)
Q Consensus 231 ~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l---~~d~~~~~~~~~~~ 307 (592)
.+.. |+ . ++.+.|.+ .++...+.. ..
T Consensus 219 ----------------~~~~----------------------------g~--~--~~~~~H~~~~~~~~~~~~~~-~~-- 247 (406)
T 1p1m_A 219 ----------------LKEV----------------------------KT--I--AAHCVHLPERYFGVLKDIPF-FV-- 247 (406)
T ss_dssp ----------------TTTS----------------------------CE--E--EEECTTCCGGGTTTTTTSSE-EE--
T ss_pred ----------------HhHc----------------------------Cc--c--eeEeeeccCcccCCHHHHHH-HH--
Confidence 0011 22 1 12233333 222222110 00
Q ss_pred ccceecCC--CCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCC
Q psy6858 308 AAHVLSPP--LRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILS 385 (592)
Q Consensus 308 ~~~~~~pp--lr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~ 385 (592)
..+|+ ++. ......++++++.|+.+++|||+++.+...+. -.+.++...+.+++...+++
T Consensus 248 ---~~~p~~~~~~-~~~~~~~~~~~~~Gv~~~lgtD~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~ls 309 (406)
T 1p1m_A 248 ---SHNPASNLKL-GNGIAPVQRMIEHGMKVTLGTDGAASNNSLNL--------------FFEMRLASLLQKAQNPRNLD 309 (406)
T ss_dssp ---EECHHHHHHT-TCCCCCHHHHHHTTCEEEECCCCTTTTSCCCH--------------HHHHHHHHHHHHTTCTTSSC
T ss_pred ---HhCcHHHhhc-CCCcCcHHHHHhCCCeEEEECCCCcCCCCCCH--------------HHHHHHHHHHhcccCCCCCC
Confidence 11221 111 11223577899999999999999875422111 11667777777766567899
Q ss_pred HHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEE---eeeeeEEEECCEEE
Q psy6858 386 PEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVC---HGVPEYVIVGGRVC 462 (592)
Q Consensus 386 ~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~---~g~~~~Viv~GkvV 462 (592)
+.++++++|.|||++||++ + |+|++|++|||||||++..+.++.. +|+.++.+ .++|..||++|++|
T Consensus 310 ~~~al~~~T~~~A~~lgl~-~-G~l~~G~~ADlvv~d~~~~~~~~~~--------~~~~~~~~~~~~~~v~~v~v~G~~v 379 (406)
T 1p1m_A 310 VNTCLKMVTYDGAQAMGFK-S-GKIEEGWNADLVVIDLDLPEMFPVQ--------NIKNHLVHAFSGEVFATMVAGKWIY 379 (406)
T ss_dssp HHHHHHHHTHHHHHHHTCS-C-SSCCTTSBCCEEEEECCSGGGCSGG--------GHHHHHHHTCCSCCSEEEETTEEEE
T ss_pred HHHHHHHHHHHHHHHhCCC-C-cccCCCCcccEEEEeCCccccCCcc--------ChHHHheEecCCCCceEEEECCEEE
Confidence 9999999999999999995 5 9999999999999999866554432 34433332 46889999999999
Q ss_pred EECCeeee
Q psy6858 463 VDEGNLRV 470 (592)
Q Consensus 463 ~~~g~l~~ 470 (592)
| +|+++.
T Consensus 380 ~-~g~~~~ 386 (406)
T 1p1m_A 380 F-DGEYPT 386 (406)
T ss_dssp E-TTBCTT
T ss_pred E-CCeeCC
Confidence 9 998754
No 39
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=100.00 E-value=2.6e-33 Score=299.03 Aligned_cols=351 Identities=18% Similarity=0.158 Sum_probs=216.7
Q ss_pred cccEEEEccEEEcCCC--ceeeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccCCC------CC
Q psy6858 18 QNRLLIKNGKVVNADK--ISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGA------TS 89 (592)
Q Consensus 18 ~~~llIkng~Iv~~d~--~~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~~------~~ 89 (592)
+++++|+|++|++++. ...++|+|+||+|++|++. .+.+.++||++|++|+|||||+|+|+. ..... .+
T Consensus 5 ~~~~~i~n~~v~~~~~~~~~~~~v~I~~g~I~~ig~~--~~~~~~viD~~g~~v~PGlID~H~H~~-~~~~~~~~~~~~~ 81 (408)
T 3be7_A 5 SEDFLIKSKGYLDIQTGEIIKADLLIRNGKIAEIGKI--NTKDATVISIPDLILIPGLMDSHVHIV-GNDSKGEESIADS 81 (408)
T ss_dssp CCCEEEEEEEEECTTTCCEECCEEEEETTEEEEEECC--CCSSSEEEEEEEEEEEECEEEEEECCS-SCCCCSGGGTTCC
T ss_pred cceEEEEeeEEEeCCCCceeeeEEEEECCEEEEEeCC--CCCCCeEEECCCCEECcCceeeeEccc-CCCCcchhhhcCC
Confidence 4589999999999765 3459999999999999986 344678999999999999999999997 32110 12
Q ss_pred hhhHH----HHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhcc---C------ceeeeeccccccCCC-------
Q psy6858 90 VDDFY----HGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADE---K------VCCDYALHVGITWWS------- 149 (592)
Q Consensus 90 ~d~~~----~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~---~------~~~~~~~~~~~~~~~------- 149 (592)
+++.+ ..++.++++||||++|+..... ....++........ + ....++.|...+.+.
T Consensus 82 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~---~~~~~~~~~~~~~~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 158 (408)
T 3be7_A 82 SHMGTVWGVVNAEKTLMAGFTTVRNVGAANY---ADVSVRDAIERGVINGPTMLVSGPALGITGGHCDHNLLPPEFNYSS 158 (408)
T ss_dssp THHHHHHHHHHHHHHHTTTEEEEEECCCSTT---HHHHHHHHHHTTSSCCCEEEECCSCBBCTTSTTSCCCSCTTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEeCCCccc---cCHHHHHHHHCCCCCCCEEEEccceeeccCCCCccccccccccccC
Confidence 22222 2577889999999999854321 22233333222211 0 111222232222111
Q ss_pred ---hHHHHHHHHHHH---HcCCcEEEEEEee--------CCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHH
Q psy6858 150 ---DQVQQEMAELCE---KHGVNSFKTFMAY--------KGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQK 215 (592)
Q Consensus 150 ---~~~~~~~~~lv~---~~Gv~~~k~~~~~--------~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~ 215 (592)
....+++.++++ ..|...+|++... .+...++++++.++++.|++.|+++.+|+.+... ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~----i~~ 234 (408)
T 3be7_A 159 EGVVDSPWEARKMVRKNRKYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHNHGMKVAAHAHGLIG----IKA 234 (408)
T ss_dssp TTBCCSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCEEEEEECSHHH----HHH
T ss_pred CcccCCHHHHHHHHHHHHhcCCCEEEEEecCCcCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEeCCHHH----HHH
Confidence 112344444432 3588889988532 1235678999999999999999999999987431 111
Q ss_pred HHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCceeeeeecccc-eee
Q psy6858 216 LLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAA-AVG 294 (592)
Q Consensus 216 ~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~-~l~ 294 (592)
+++. ++. .+.|+.... .+.++.+++. |+ .+....... .+.
T Consensus 235 ~~~~-------------------------------g~~-~i~H~~~~~-~~~i~~~~~~----g~--~v~~~~~~~~~~~ 275 (408)
T 3be7_A 235 AIKA-------------------------------GVD-SVEHASFID-DETIDMAIKN----NT--VLSMDIFVSDYIL 275 (408)
T ss_dssp HHHH-------------------------------TCS-EEEECTTCC-HHHHHHHHHT----TC--EEECCCSTHHHHH
T ss_pred HHHc-------------------------------CCC-EEEECCCCC-HHHHHHHHHC----CC--EEeeeecHHHHhh
Confidence 1111 222 355655432 3455666655 77 442111100 000
Q ss_pred cCCCCCCCcccccccceecCCCCCC-----CCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhh
Q psy6858 295 THANQIPCTWHDQAAHVLSPPLRPD-----ETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQD 369 (592)
Q Consensus 295 ~d~~~~~~~~~~~~~~~~~pplr~~-----~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~ 369 (592)
..+. ...+.|+++.. ......++.+++.|+.+++|||+.+.+ .|....+.
T Consensus 276 ~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~gTD~~~~p---------------~~~~~~~~ 330 (408)
T 3be7_A 276 GEGA----------KAGIREESLNKERLVGKKQRENFMNAHRRGAIITFGTDAGIFD---------------HGDNAKQF 330 (408)
T ss_dssp TTTT----------TTTCCHHHHHHHHHHHHHHHHHHHHHHHHTCCEECCCCBTTBC---------------TTCGGGHH
T ss_pred hhcc----------ccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC---------------CchHHHHH
Confidence 0000 00011111100 011356788899999999999985421 11112233
Q ss_pred HHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEEe
Q psy6858 370 RLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCH 449 (592)
Q Consensus 370 ~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~ 449 (592)
++ ++.. ++++.++++++|.|||++||++ ++|+|++|++|||||||.+.... ....
T Consensus 331 ~~------~~~~-gls~~~al~~~T~n~A~~lgl~-~~G~i~~G~~ADlvvld~~p~~~-----------------~~~~ 385 (408)
T 3be7_A 331 AY------MVEW-GMTPLEAIQASTIKTATLFGIE-NIGQIKEGFDADIVGVIENPLAN-----------------IRTL 385 (408)
T ss_dssp HH------HHHT-TCCHHHHHHTTTHHHHHHHTCS-SCSSCCTTSBCCEEEESSCTTTC-----------------GGGT
T ss_pred HH------HHHc-CCCHHHHHHHHHHHHHHHhCCC-cccccCCCCccCEEEECCCchhh-----------------HHHh
Confidence 22 2223 7999999999999999999997 89999999999999999873211 1111
Q ss_pred eeeeEEEECCEEEEECCe
Q psy6858 450 GVPEYVIVGGRVCVDEGN 467 (592)
Q Consensus 450 g~~~~Viv~GkvV~~~g~ 467 (592)
..+..||++|++|+++..
T Consensus 386 ~~v~~v~~~G~~v~~~~~ 403 (408)
T 3be7_A 386 EEVAFVMKEGKVYKREGH 403 (408)
T ss_dssp TSCCEEEETTEEEEECCC
T ss_pred hceeEEEECCEEEecccc
Confidence 257899999999998864
No 40
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17
Probab=100.00 E-value=2.7e-33 Score=303.93 Aligned_cols=363 Identities=18% Similarity=0.152 Sum_probs=215.0
Q ss_pred cccEEEEccEEEcCCC--ce-eeEEEE-ECCEEEEeec--CCCCCCCCeEEecCCCEEeeCccccCcCcccccCC-C---
Q psy6858 18 QNRLLIKNGKVVNADK--IS-DLDIYI-ENGVIQQLGR--NLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMG-A--- 87 (592)
Q Consensus 18 ~~~llIkng~Iv~~d~--~~-~~dV~I-~dG~I~~Ig~--~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~-~--- 87 (592)
..+++|+|++|++++. .. +++|+| +||+|++||+ +...+.+.++||++|++|+|||||+|+|+..+... .
T Consensus 12 ~~~~li~n~~i~~~~~~~~~~~~~v~I~~~g~I~~Vg~~~~~~~~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~~~~~~ 91 (458)
T 2p9b_A 12 EPFALAHATIVTGDKAGTILRNMTIVVGADGRIEQVAPSIETSIPAEYHYLDGTGKIVMPGLINAHTHLFSQGKPLNPKL 91 (458)
T ss_dssp CCEEEEEEEEECCCTTCCEEEEEEEEECTTSBEEEEEEGGGCCCCTTCEEEECTTCEEEECEEEEEECSCC---------
T ss_pred CCcEEEEeeEEEeCCCCccccCcEEEEecCCEEEEEeccccCCCCCCCeEEECCCCEEccceeeeeeccccccccccccc
Confidence 5689999999999764 33 589999 9999999998 54444567899999999999999999999765422 0
Q ss_pred ------------C--------ChhhHHHHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccC-ceee--------
Q psy6858 88 ------------T--------SVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEK-VCCD-------- 138 (592)
Q Consensus 88 ------------~--------~~d~~~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~-~~~~-------- 138 (592)
. ....+..+++.++++||||++|+..... ....++......... ..+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~---~~~~~~~~~~~g~~~g~r~~~~g~~~~~ 168 (458)
T 2p9b_A 92 ATPKGQRMVATFAHSPLGKPYMAATVKHNATTLLESGVTTIRTLGDVGY---EVVTLRDQIDAGQILGPRILASGPLMAI 168 (458)
T ss_dssp --------------------CHHHHHHHHHHHHHHTTEEEEEESCCSSS---HHHHHHHHHHTTSSCCCEEECCCSCEEC
T ss_pred cchhhhhhhhhhhhhcccccHHHHHHHHHHHHHHHcCCcEEEeCCCCcc---ccHHHHHHHHcCCCCCCeEEeccccccc
Confidence 0 0113455788899999999999854321 223333333322210 1111
Q ss_pred eeccccc----cCCC-hHHHHHHHHHHHHcCCcEEEEEEee----------CCCcCCCHHHHHHHHHHHHHcCCeEEEec
Q psy6858 139 YALHVGI----TWWS-DQVQQEMAELCEKHGVNSFKTFMAY----------KGLYMLSDGELYDAFSAIKNLGAIAMVHA 203 (592)
Q Consensus 139 ~~~~~~~----~~~~-~~~~~~~~~lv~~~Gv~~~k~~~~~----------~~~~~~~~~~l~~~~~~a~~~g~~~~vHa 203 (592)
.+.|... .... ++..+.++++. +.|...+|++... .+...++++++.++++.|+++|+++.+|+
T Consensus 169 ~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~ik~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~ 247 (458)
T 2p9b_A 169 PEGHGAPLIALTSGTPEEARTAVAQNL-KAGVNAIKIAATGGVTDAQEIGEAGSPQMSVEQMRAICDEAHQYGVIVGAHA 247 (458)
T ss_dssp CCSSCCCCEECCSCCHHHHHHHHHHHH-HTTCSCEEEECSCCTTSCCCC------CCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCCccccCccCCCHHHHHHHHHHHH-HcCCCEEEEEecCCcCCCCccCCCCCCcCCHHHHHHHHHHHHHCCCeEEEEe
Confidence 1111100 0011 22233344443 3588889988641 12346788999999999999999999999
Q ss_pred CchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHH------HHHHh
Q psy6858 204 ENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKR------KELMK 277 (592)
Q Consensus 204 e~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar------~~~~~ 277 (592)
++.. .....++.|....+|.....++ .++.++ +.
T Consensus 248 ~~~~----~i~~~~~~G~~~i~H~~~~~~~---------------------------------~~~~~~~~~~~~~~--- 287 (458)
T 2p9b_A 248 QSPE----GVRRSLLAGVDTIEHGSVLDDE---------------------------------LIGMFRHNPNALRG--- 287 (458)
T ss_dssp CSHH----HHHHHHHHTCSEEEECCCCCHH---------------------------------HHHHHHCCTTSTTS---
T ss_pred CCHH----HHHHHHHcCCCEEEECCCCCHH---------------------------------HHHHHhcccccccC---
Confidence 8643 2333445555444443333322 222222 22
Q ss_pred cCCceeeeeeccc--ceeecCCC-CCCCcccccccceecCCCCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCC
Q psy6858 278 KGKHCTLYGETLA--AAVGTHAN-QIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGK 354 (592)
Q Consensus 278 ~G~~~~v~~e~~~--~~l~~d~~-~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~ 354 (592)
|+ .+.....+ .++..+.. .....|.. ..++.+. ......++.+++.|+.+++|||+.+.
T Consensus 288 -g~--~v~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~Gv~~~~gtD~~~~--------- 349 (458)
T 2p9b_A 288 -YS--ALIPTLSAGLPLTLLGQDVTGITDIQL-----ENSKNVV-GGMVSGARQAHEAGLMIGVGTDTGMT--------- 349 (458)
T ss_dssp -CC--EEECCHHHHHHHHHSCHHHHCCCHHHH-----HHHHHHH-HHHHHHHHHHHHTTCCBCCCCCTTST---------
T ss_pred -Ce--EEEeecchhhHHHhhhcccccCCHHHH-----HHHHHHH-HHHHHHHHHHHHCCCeEEEecCCCCC---------
Confidence 43 22111100 00000000 00000100 0001110 12245678899999999999997421
Q ss_pred CCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcc
Q psy6858 355 DSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTH 434 (592)
Q Consensus 355 ~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~ 434 (592)
| .|.+....+.+ .++...++++.++++++|.|||++||+++++|+|++|++|||||||.+...
T Consensus 350 --~--~~~~~~~~e~~------~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~Gsi~~Gk~ADlvvld~~p~~------- 412 (458)
T 2p9b_A 350 --F--VPQYATWRELE------LLVAYAGFSPAEALHAATAVNASILGVDAETGSLEVGKSADLLVLNANPLD------- 412 (458)
T ss_dssp --T--SCTTCHHHHHH------HHHHHHCCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTTT-------
T ss_pred --C--CccccHHHHHH------HHHHhcCCCHHHHHHHHHHHHHHHhCCcCCCCccCCCCcCCEEEECCCchh-------
Confidence 1 12222122222 123334799999999999999999999888999999999999999987321
Q ss_pred cccCCCCcccCeEEeeeeeEEEECCEEEEEC--Ceee
Q psy6858 435 AHACDYNIFEGLVCHGVPEYVIVGGRVCVDE--GNLR 469 (592)
Q Consensus 435 ~~~~~~~~~~g~~~~g~~~~Viv~GkvV~~~--g~l~ 469 (592)
.......|..||++|++|+++ |++.
T Consensus 413 ----------~~~~~~~v~~v~v~G~~v~~~~~~~~~ 439 (458)
T 2p9b_A 413 ----------DLRALEHPALVIAAGHPVWRPGPKRFA 439 (458)
T ss_dssp ----------CGGGGTSCSEEEETTEECCSCCCCCCH
T ss_pred ----------CHHHhccceEEEECCEEEecCchhhhh
Confidence 111113678999999999987 5543
No 41
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=100.00 E-value=5.8e-35 Score=333.97 Aligned_cols=369 Identities=15% Similarity=0.141 Sum_probs=216.9
Q ss_pred cccEEEEccEEEcCCCceeeEEEEECCEEEEeec------------CCCCCCCCeEEecCCCEEeeCccccCcCcccccC
Q psy6858 18 QNRLLIKNGKVVNADKISDLDIYIENGVIQQLGR------------NLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELM 85 (592)
Q Consensus 18 ~~~llIkng~Iv~~d~~~~~dV~I~dG~I~~Ig~------------~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~ 85 (592)
.+||+|+||+|+|.++.+++||+|+||||++||+ ++..+.+++||||+|++|+|||||+|+|+..+.
T Consensus 336 ~~DLVItNA~IVD~tGi~kADI~IkDGRIaAIGkagnpD~~dgV~pdl~ig~gtEVIDA~GkiVtPGfID~HvHl~~P~- 414 (840)
T 4gy7_A 336 SLDTVITNAVIIDYTGIIKADIGIKDGLIASIGKAGNPDIMNGVFSNMIIGANTEVIAGEGLIVTAGAIDCHVHYICPQ- 414 (840)
T ss_dssp SCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTCSSCCTTSBCCTTCEEEECTTCEEEECEEEEEEECCCTH-
T ss_pred cCCEEEeCeEEECCCCeEEeeEEEECCEEEEEeccCCcccccccccccccCCCCEEEECCCCEEccCeeeeccCCCCCC-
Confidence 4799999999999999999999999999999996 334556889999999999999999999986542
Q ss_pred CCCChhhHHHHHHHHHcCCeeEEeccccCCCC-------ccHHHHHHHHHHHhccCceeeeeccccccCCChHHHHHHHH
Q psy6858 86 GATSVDDFYHGTKAAVAGGTTTIIDFALPRKG-------ESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAE 158 (592)
Q Consensus 86 ~~~~~d~~~~~~~~ala~GtTti~d~~~~~~~-------~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (592)
....++++|+||+++....... .............. ....++++++........ +++.+
T Consensus 415 ----------~~~eALasGVTTvv~gGtgp~~~~~~~~~~~~~~~~~~~l~a~-~~~~vn~g~~~~~~~~~~---~~L~e 480 (840)
T 4gy7_A 415 ----------LVYEAISSGITTLVGGGTGPAAGTRATTCTPSPTQMRLMLQST-DDLPLNFGFTGKGSSSKP---DELHE 480 (840)
T ss_dssp ----------HHHHHHHHTEEEEEEECSSSCHHHHHSSCCCSHHHHHHHHHHT-TTSSSEEEEEEECCCSSS---HHHHH
T ss_pred ----------chHHHHHhhHHHHHhCCCceecCcccccccchHHHHHHHHhhh-hcceeEEEEeCCCCcccH---HHHHH
Confidence 2456788999999876422110 01111222222222 223455666554443333 34555
Q ss_pred HHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHH
Q psy6858 159 LCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAE 238 (592)
Q Consensus 159 lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~e 238 (592)
+.+ .|+.++|.++.+ ..+++.+.++++.+++++..+.+|++...........+..........+........
T Consensus 481 l~~-aGa~g~K~~~~~----~~t~~~i~~aL~~A~e~g~~V~ih~e~~~~~~~vee~laA~~g~~~h~~~~e~~~~~--- 552 (840)
T 4gy7_A 481 IIK-AGAMGLKLHEDW----GSTPAAIDNCLTIAEHHDIQINIHTDTLNEAGFVEHSIAAFKGRTIHTYHSEGAGGG--- 552 (840)
T ss_dssp HHH-HTCSEEEEETTT----CCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHHTTCCEEETTTTSTTSC---
T ss_pred hhh-ceeeEEEecccc----CCCHHHHHHHHHHHHHhCCEEEEeccCcchhHHHHHHHHhhcCCcccceeccccccc---
Confidence 544 499999987653 468899999999999999999999877554433333332222111111101100000
Q ss_pred HHHHHHHHhcccCCCEEEEec---ccHHHHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCcccccccceecCC
Q psy6858 239 AVTRACTIANQVDCPLYVVHI---MSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPP 315 (592)
Q Consensus 239 av~~~i~la~~~~~pl~i~hv---~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~~~~~~~~~~~pp 315 (592)
.+..+.+..+.+..+.+. ........+...... .. ..+ +....+.....+..+++
T Consensus 553 ---~A~dii~~~~~a~~l~~~t~~~~~~~~~~~~e~l~~----~~--------~~~-------~l~~~i~ed~~~~~s~~ 610 (840)
T 4gy7_A 553 ---HAPDIIKVCGIKNVLPSSTNPTRPLTSNTIDEHLDM----LM--------VCH-------HLDREIPEDLAFAHSRI 610 (840)
T ss_dssp ---STTTGGGGGGCTTEEEEEESTTSSCBTTHHHHHHHH----HH--------HHT-------TCCTTSHHHHHHHHHHS
T ss_pred ---cchHHHHHhhcccceeeEeeccchhhhhhhhhhhee----EE--------eee-------ccCccchhhhhhccCcC
Confidence 011112222222222111 111000011100000 00 000 11111122223334444
Q ss_pred CCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHH----HhhccCCCCCHHHHHH
Q psy6858 316 LRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIW----EKGVVPGILSPEKFVA 391 (592)
Q Consensus 316 lr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~----~~~v~~~~l~~~e~v~ 391 (592)
++. .......+...|...+++||++++....+... + .......+...+ ...+..++|++.++|+
T Consensus 611 ~~~---~~a~~~ll~dlGvi~~isSD~~p~~~~~e~~~---~------~~~~a~~~~~~~g~~~~e~~~~~~Lsl~eAIr 678 (840)
T 4gy7_A 611 RKK---TIAAEDVLNDIGAISIISSDSQAMGRVGEVIS---R------TWQTADKMKAQTGPLKCDSSDNDNFRIRRYIA 678 (840)
T ss_dssp CHH---HHHHHHHHHHTTSSCEEECCBTTTBCGGGHHH---H------HHHHHHHHHHHHCSCTTSCSSCCHHHHHHHHH
T ss_pred Ccc---chhHHHHHHhCCCeEEEeccccccccccccch---h------hhcccccchhhcccchhhhhhcCCCCHHHHHH
Confidence 442 22222234456999999999988764432110 0 000000000000 0123456689999999
Q ss_pred HHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEECCEEEEEC
Q psy6858 392 VTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDE 465 (592)
Q Consensus 392 ~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv~GkvV~~~ 465 (592)
++|.|||++||+++++|+|++||+||||||||.. +..+|+.|+++|+|||..
T Consensus 679 ~aTiNPAraLGLddr~GSIEpGK~ADLVLfDPa~----------------------FGvKPe~Vik~G~Iv~~~ 730 (840)
T 4gy7_A 679 KYTINPAIANGFSQYVGSVEVGKLADLVMWKPSF----------------------FGTKPEMVIKGGMVAWAD 730 (840)
T ss_dssp TTTHHHHHHHTCTTTSSSSCTTSBCCEEEECGGG----------------------TTTCCSEEEETTEEEEEE
T ss_pred HHHHHHHHHhCCCCCccccCCCCcceEEEECchH----------------------cCCCCeEEEECCEEEEcC
Confidence 9999999999999999999999999999999861 111688999999999953
No 42
>1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A*
Probab=100.00 E-value=1.3e-33 Score=299.91 Aligned_cols=352 Identities=16% Similarity=0.167 Sum_probs=212.8
Q ss_pred cccEEEEccEEEcCCCceeeEEEEECCEEEEeecCCCC--CCCCeEEecCCCEEeeCccccCcCcccccCC----CCChh
Q psy6858 18 QNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIV--PGGVRVIDAAGSYVIPGGIDPHTHFELELMG----ATSVD 91 (592)
Q Consensus 18 ~~~llIkng~Iv~~d~~~~~dV~I~dG~I~~Ig~~~~~--~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~----~~~~d 91 (592)
+..++|+|++|++++....++|+|+||+|++|++.... +.+.++||++|++|+|||||+|+|+...... ..+.+
T Consensus 7 ~~~~~i~n~~v~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~ 86 (390)
T 1onw_A 7 AGFTLLQGAHLYAPEDRGICDVLVANGKIIAVASNIPSDIVPNCTVVDLSGQILCPGFIDQHVHLIGGGGEAGPTTRTPE 86 (390)
T ss_dssp GCCEEEESCEEESSSEEEECEEEEETTEEEEEETTCCTTSSSSCEEEECTTCEEEECEEEEEECTTCCBCTTSGGGBCCC
T ss_pred cceEEEECcEEECCCCCccceEEEECCEEEEEecCcccCCCCCCeEEeCCCCEECcCeeEeeECccccCccccccccCHH
Confidence 34689999999998766678999999999999986432 2356899999999999999999998532111 11112
Q ss_pred hHHHHHHHHHcCCeeEEeccccCCCCccHHHH----HHHHHHHhccCceeeeeccc-cccCCChHHHHHHHHHHHHcCCc
Q psy6858 92 DFYHGTKAAVAGGTTTIIDFALPRKGESLIKT----YESWRQKADEKVCCDYALHV-GITWWSDQVQQEMAELCEKHGVN 166 (592)
Q Consensus 92 ~~~~~~~~ala~GtTti~d~~~~~~~~~~~~a----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lv~~~Gv~ 166 (592)
..++.++++||||++++....+.....+. .+...... .......+.+. ...........++. +++ ...
T Consensus 87 ---~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~--~~~ 159 (390)
T 1onw_A 87 ---VALSRLTEAGVTSVVGLLGTDSISRHPESLLAKTRALNEEG-ISAWMLTGAYHVPSRTITGSVEKDVA-IID--RVI 159 (390)
T ss_dssp ---CCHHHHHHTTEEEEEECCCSCCSSCCHHHHHHHHHHHHHHT-SEEEEEEECSCSSCCCSSSCHHHHHH-HCT--TEE
T ss_pred ---HHHHHHHHCCeeEEecCCCcccccCcHHHHHHHHHHHHhcC-CceEEeccccCCCchhhhhhhcchhh-hHH--Hhh
Confidence 24678899999999998654332222222 22222211 11111122111 11111122222221 111 222
Q ss_pred EEEEEEeeCCCcCCCHHHHHHHHHHHHHcCC------eEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHH
Q psy6858 167 SFKTFMAYKGLYMLSDGELYDAFSAIKNLGA------IAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAV 240 (592)
Q Consensus 167 ~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~------~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav 240 (592)
.+++.+.++.....+.+++.++++.++..+. .+.+|........+.
T Consensus 160 g~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~g~~~~h~~~~~~~~~~---------------------------- 211 (390)
T 1onw_A 160 GVKCAISDHRSAAPDVYHLANMAAESRVGGLLGGKPGVTVFHMGDSKKALQP---------------------------- 211 (390)
T ss_dssp EEEEEESSTTSCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEEECSCTTTTHH----------------------------
T ss_pred cceeeecCCCCCCCCHHHHHHHHHHHhhhhhhhccCceEEEEeCCCHHHHHH----------------------------
Confidence 2366666666666889999999888776543 366775321111111
Q ss_pred HHHHHHhcccCCCEEE---EecccHHHH--HHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCcccccccceecCC
Q psy6858 241 TRACTIANQVDCPLYV---VHIMSKAAG--DAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPP 315 (592)
Q Consensus 241 ~~~i~la~~~~~pl~i---~hv~s~~a~--~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~~~~~~~~~~~pp 315 (592)
...+++..++++++ .|+...... +.++.+++. |. ..+.++ .+|+
T Consensus 212 --~~~~~~~g~~~v~~l~~~h~~~~~~~~~~~~~~~~~~----~~-~~~~~~------------------------~~~~ 260 (390)
T 1onw_A 212 --IYDLLENCDVPISKLLPTHVNRNVPLFEQALEFARKG----GT-IDITSS------------------------IDEP 260 (390)
T ss_dssp --HHHHHHTCCCCGGGEEEECGGGSHHHHHHHHHHHHTT----CC-EEEETT------------------------CCSS
T ss_pred --HHHHHhccCCceEEeeccccccCHHHHHHHHHHHhcC----Cc-cccccc------------------------cCCC
Confidence 12222233444332 454322211 333333332 32 011110 1122
Q ss_pred CCCCCCCHHHHHHHHhcCCc---eEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHH
Q psy6858 316 LRPDETTPTHLLTLLNENAL---QTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAV 392 (592)
Q Consensus 316 lr~~~~~~~~l~~~l~~G~~---~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~ 392 (592)
..+.+.++.+++.|+. ++++||+.+....... +....+.|..+++..+..++ .++...++++.+++++
T Consensus 261 ----~~~~~~l~~~~~~g~~~d~i~l~TD~~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 331 (390)
T 1onw_A 261 ----VAPAEGIARAVQAGIPLARVTLSSDGNGSQPFFDD----EGNLTHIGVAGFETLLETVQ-VLVKDYDFSISDALRP 331 (390)
T ss_dssp ----SCHHHHHHHHHHTTCCGGGEEEECCBTCC-----------------CCCCSHHHHHHHH-HHHHHHCCCHHHHHGG
T ss_pred ----CcCHHHHHHHHHcCCCccceEEEccCCCCCcccCC----ccccccccCCCHHHHHHHHH-HHHHHcCCCHHHHHHH
Confidence 2467889999999973 6999999754321111 12234678888888777766 4565678999999999
Q ss_pred HhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEECCEEEEECCeeee
Q psy6858 393 TSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRV 470 (592)
Q Consensus 393 ~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv~GkvV~~~g~l~~ 470 (592)
+|.|||++||+ +++|+|++|++|||||||++ + .+..||++|++|+++|++..
T Consensus 332 ~t~npA~~~gl-~~~G~i~~G~~ADlvv~d~~--~-----------------------~v~~v~~~G~~v~~~g~~~~ 383 (390)
T 1onw_A 332 LTSSVAGFLNL-TGKGEILPGNDADLLVMTPE--L-----------------------RIEQVYARGKLMVKDGKACV 383 (390)
T ss_dssp GTHHHHHHTTC-TTCSSCCTTSBCCEEEECTT--C-----------------------CEEEEEETTEEEEETTEESS
T ss_pred HhHHHHHHhCC-CCCcccCCCCcCCEEEEcCC--C-----------------------cEEEEEECCEEEEECCeEcc
Confidence 99999999999 57899999999999999976 1 34799999999999999863
No 43
>1e9y_B Urease subunit beta; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.92.1.1 c.1.9.2 PDB: 1e9z_B* 3qga_C* 3qgk_C*
Probab=100.00 E-value=8.8e-34 Score=314.04 Aligned_cols=357 Identities=18% Similarity=0.212 Sum_probs=227.6
Q ss_pred cccEEEEccEEEcCCCceeeEEEEECCEEEEeecCCC------------CCCCCeEEecCCCEEeeCccccCcCcccccC
Q psy6858 18 QNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLI------------VPGGVRVIDAAGSYVIPGGIDPHTHFELELM 85 (592)
Q Consensus 18 ~~~llIkng~Iv~~d~~~~~dV~I~dG~I~~Ig~~~~------------~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~ 85 (592)
.++++|+|++|+|.....++||+|+||+|++||+... .+.+.++||++|++|+|||||+|+|+..+.
T Consensus 65 ~~dllI~n~~Vid~~gi~~~dI~I~dGrI~~IG~~~~~~~~~~~~~~~~~~~~~evIDa~G~iV~PGlID~HvHl~~p~- 143 (569)
T 1e9y_B 65 ELDLIITNALIVDYTGIYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHFISPQ- 143 (569)
T ss_dssp CCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTSSSCCGGGBCCTTCEEEECTTCEEEECEEEEEEETTCTT-
T ss_pred cCCEEEEeeEEECCCCcEeeeEEEECCEEEEeecCCCccccccccccccCCCCCeEEECCCCEEecCEEEEeecCCCcH-
Confidence 5789999999999776678999999999999997532 134678999999999999999999996542
Q ss_pred CCCChhhHHHHHHHHHcCCeeEEeccccCCC-Cc------cHHHHHHHHHHHhccCceeeeeccccccCCChHHHHHHHH
Q psy6858 86 GATSVDDFYHGTKAAVAGGTTTIIDFALPRK-GE------SLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAE 158 (592)
Q Consensus 86 ~~~~~d~~~~~~~~ala~GtTti~d~~~~~~-~~------~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (592)
.++.++++||||++|+..... +. .-...++.+.+.... ..++++++..... ...+++.+
T Consensus 144 ----------~~~~al~~GvTTv~d~g~~p~~~t~~~~~~~g~~~l~~~~~a~~~-~~~~~~~~g~g~~---~~~~~l~e 209 (569)
T 1e9y_B 144 ----------QIPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAEE-YSMNLGFLAKGNA---SNDASLAD 209 (569)
T ss_dssp ----------HHHHHHHTTEEEEEEECCSSCHHHHHCCCCCHHHHHHHHHHHHTT-SSSEEEEEEECCC---SCHHHHHH
T ss_pred ----------HHHHHHhCCeeEEEcCCcCCCCCCcCcccCCcHHHHHHHHHHhcc-cCceEEEECCCCc---CCHHHHHH
Confidence 167899999999999853110 00 012233333333332 2345555432211 23456777
Q ss_pred HHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHH
Q psy6858 159 LCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAE 238 (592)
Q Consensus 159 lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~e 238 (592)
+++ .|+..+|.+.. +.++++++.++++.|+++|+++.+|+++.... + .++ +
T Consensus 210 ~~~-~Ga~gik~~~~----~~~t~e~l~~~l~~A~~~g~~V~iHa~~~~e~----------g-------------~~~-~ 260 (569)
T 1e9y_B 210 QIE-AGAIGFKIHED----WGTTPSAINHALDVADKYDVQVAIHTDTLNEA----------G-------------CVE-D 260 (569)
T ss_dssp HHH-TTCSEEEECGG----GCCCHHHHHHHHHHHHHTTCEEEECCCTTCSS----------C-------------CHH-H
T ss_pred HHH-cCCCEEEecCC----CCCCHHHHHHHHHHHHHhCCEEEEEcCCcccc----------h-------------HHH-H
Confidence 765 58888887654 34789999999999999999999999752100 0 011 1
Q ss_pred HHHHHHHHhcccCCCEEEEecccHHH---HHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCcccc-cccceecC
Q psy6858 239 AVTRACTIANQVDCPLYVVHIMSKAA---GDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHD-QAAHVLSP 314 (592)
Q Consensus 239 av~~~i~la~~~~~pl~i~hv~s~~a---~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~~~~-~~~~~~~p 314 (592)
. ++...++++|+.|+..... .+.|+.+++. |+.+.+ .+.++......+...+.. ...+...+
T Consensus 261 ----~--la~~~g~~~hi~H~~~~~~~~~~d~I~~~~~~----gv~~~~----~~ptl~~t~~~~~~~~d~~~v~h~l~~ 326 (569)
T 1e9y_B 261 ----T--MAAIAGRTMHTFHTEGAGGGHAPDIIKVAGEH----NILPAS----TNPTIPFTVNTEAEHMDMLMVCHHKDK 326 (569)
T ss_dssp ----H--HHHHTTCCEEETTTTSTTSCSTTTGGGGGGST----TEEEEE----CGGGCSCBTTHHHHHHHHHHHTTTCCS
T ss_pred ----H--HHHHcCCCEEEEEcccCcccccHHHHHHHHHc----CCeeEe----eCCccccccchhhhhhchhhhhhhcCc
Confidence 1 2233678999999987653 5677777666 651111 111111111000000000 00011112
Q ss_pred CC---------CCCCCCHHHHHHHHh-cCCceEEeCCCCCCChh----hhhcCCCCCCcCCCCCcchhhHHHHHHH----
Q psy6858 315 PL---------RPDETTPTHLLTLLN-ENALQTTGSDNCTFNKN----QKELGKDSFTHIPNGVNGVQDRLSVIWE---- 376 (592)
Q Consensus 315 pl---------r~~~~~~~~l~~~l~-~G~~~~~gsD~~~~~~~----~~~~g~~~f~~~p~G~~g~e~~~~~~~~---- 376 (592)
++ |. .....++++.+. .|+.+++|||+++.+.. .... .....|...+-
T Consensus 327 ~~~ed~~~~~~rl-r~~~~a~~~~L~d~Gv~v~iGSD~~~~~~~g~~~~~~~-------------~~~~~~~~~~G~l~~ 392 (569)
T 1e9y_B 327 SIKEDVQFADSRI-RPQTIAAEDTLHDMGAFSITSSDSQAMGRVGEVITRTW-------------QTADKNKKEFGRLKE 392 (569)
T ss_dssp SCHHHHHHHHHHC-CHHHHHHHHHHHHTTSCCEECCCTTSSCCTTSHHHHHH-------------HHHHHHHHHHCSCSS
T ss_pred ccHHHHHHhhcch-hhhHHHHHHHHHhCCCEEEEeCCCCccCcccccccchh-------------hHHHHhHhhccCcch
Confidence 21 01 123566777776 69999999999876531 0000 00001110000
Q ss_pred hhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEE
Q psy6858 377 KGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVI 456 (592)
Q Consensus 377 ~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Vi 456 (592)
......++++.++++++|.|||++||+++++|+|++|++|||||||++.. ..++..||
T Consensus 393 ~~~~~~~ls~~~al~~~T~npA~~lGl~~~~GsIe~Gk~ADlvv~d~~~~----------------------~~~v~~v~ 450 (569)
T 1e9y_B 393 EKGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFF----------------------GVKPNMII 450 (569)
T ss_dssp CCSSSCHHHHHHHHGGGTHHHHHHTTCTTTSSSSCTTSBCCEEEECTTTT----------------------TTCCSEEE
T ss_pred hhccccCCCHHHHHHHHhHHHHHHcCCCCCccCcCCCCCCCEEEECchhc----------------------CCCccEEE
Confidence 00134668899999999999999999988899999999999999998831 12567999
Q ss_pred ECCEEEEEC-Cee
Q psy6858 457 VGGRVCVDE-GNL 468 (592)
Q Consensus 457 v~GkvV~~~-g~l 468 (592)
++|++||++ |..
T Consensus 451 ~~G~iv~~~~g~~ 463 (569)
T 1e9y_B 451 KGGFIALSQMGDA 463 (569)
T ss_dssp ETTEEEEEEECCT
T ss_pred ECCEEEEcCCCCc
Confidence 999999976 553
No 44
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=100.00 E-value=3.2e-32 Score=291.82 Aligned_cols=352 Identities=17% Similarity=0.168 Sum_probs=214.0
Q ss_pred cccEEEEccEEEcCCC--c-eeeEEEEECCEEEEeecCCCCCCCC--eEEecCCCEEeeCccccCcCcccccCC------
Q psy6858 18 QNRLLIKNGKVVNADK--I-SDLDIYIENGVIQQLGRNLIVPGGV--RVIDAAGSYVIPGGIDPHTHFELELMG------ 86 (592)
Q Consensus 18 ~~~llIkng~Iv~~d~--~-~~~dV~I~dG~I~~Ig~~~~~~~~~--~vIDa~G~~V~PG~ID~HtH~~~~~~~------ 86 (592)
.|+++|+|++|++++. . .+++|+|+||+|++|++.. .+.+. ++||++|++|||||||+|+|+......
T Consensus 6 ~~~~li~n~~v~~~~~~~~~~~~~v~I~~g~I~~vg~~~-~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~ 84 (418)
T 2qs8_A 6 DSKTLIHAGKLIDGKSDQVQSRISIVIDGNIISDIKKGF-ISSNDFEDYIDLRDHTVLPGLMDMHVHFGQEYQSKAQAPI 84 (418)
T ss_dssp -CCEEEEEEEECCSSCSSCEEEEEEEEETTEEEEEEESC-CCCTTSSEEEEEEEEEEEECEEEEEECTTCCCCCTTTSCS
T ss_pred CccEEEEeeEEEeCCCCccccCcEEEEECCEEEEEeCCC-CCCCCcceEEECCCCEECCCeeeeeeccccCCCCCchhhh
Confidence 5789999999999865 3 3689999999999999865 34466 899999999999999999999765321
Q ss_pred CCChhhHHH----HHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhcc---Ccee------eeecccc-ccCCC---
Q psy6858 87 ATSVDDFYH----GTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADE---KVCC------DYALHVG-ITWWS--- 149 (592)
Q Consensus 87 ~~~~d~~~~----~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~---~~~~------~~~~~~~-~~~~~--- 149 (592)
..++++.+. +++.++++||||++|+.... . ....++...+.... +... ..+.|.. .+.+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~-~--~~~~~~~~~~~g~~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~ 161 (418)
T 2qs8_A 85 KVEREMQAILATQHAYVTFKSGFTTVRQVGDSG-L--VAISLRDAINSGKLAGPRIFAAGKTIATTGGHADPTNGKAVDD 161 (418)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTEEEEEECCCSS-S--HHHHHHHHHHTTSSCCCEEEECCSCBEETTCTTCTTTTCCGGG
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCCEEEeCCCCc-c--ccHHHHHHHHCCCCCCCeEEecCccccccCCCccccccccccc
Confidence 123343332 57788999999999984322 1 22233333332210 1111 1122221 11110
Q ss_pred ----------hHHHHHHHHHHH---HcCCcEEEEEEee--------CCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhh
Q psy6858 150 ----------DQVQQEMAELCE---KHGVNSFKTFMAY--------KGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEI 208 (592)
Q Consensus 150 ----------~~~~~~~~~lv~---~~Gv~~~k~~~~~--------~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~ 208 (592)
....+++.++++ ..|...+|+++.. .+...++++++.++++.|+++|+++.+|+.+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~- 240 (418)
T 2qs8_A 162 YDYPVPEQGVVNGPYEVYAAVRQRYKDGADGIKITVTGGVLSVAKSGQNPQFTQEEVDAVVSAAKDYGMWVAVHAHGAE- 240 (418)
T ss_dssp CCCCCGGGTEECSHHHHHHHHHHHHHHTCSEEEEECBCCSSSSSSCSSCBCSCHHHHHHHHHHHHHTTCEEEEEECSHH-
T ss_pred cccccccccccCCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEECCHH-
Confidence 112233443332 2588899988642 123568899999999999999999999998643
Q ss_pred hHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCceeeeeec
Q psy6858 209 IDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGET 288 (592)
Q Consensus 209 i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~ 288 (592)
....+++.|.. .+.|+.... .+.++.+++. |+ .+.
T Consensus 241 ---~i~~~~~~g~~--------------------------------~i~H~~~~~-~~~i~~l~~~----gv--~v~--- 275 (418)
T 2qs8_A 241 ---GMKRAIKAGVD--------------------------------SIEHGTFMD-LEAMDLMIEN----GT--YYV--- 275 (418)
T ss_dssp ---HHHHHHHHTCS--------------------------------EEEECTTCC-HHHHHHHHHH----TC--EEE---
T ss_pred ---HHHHHHHcCCC--------------------------------EEEECCCCC-HHHHHHHHHC----CC--EEe---
Confidence 22222222221 234443211 2334445555 66 321
Q ss_pred ccceeecCCCCCCCcccccccceecCCCCC-C------CCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCC
Q psy6858 289 LAAAVGTHANQIPCTWHDQAAHVLSPPLRP-D------ETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIP 361 (592)
Q Consensus 289 ~~~~l~~d~~~~~~~~~~~~~~~~~pplr~-~------~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p 361 (592)
+..+..+. +.........||.+. . ......++.+++.|+.+++|||+...+.
T Consensus 276 -p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~gTD~~~~~~-------------- 334 (418)
T 2qs8_A 276 -PTISAGEF------VAEKSKIDNFFPEIVRPKAASVGPQISDTFRKAYEKGVKIAFGTDAGVQKH-------------- 334 (418)
T ss_dssp -CCHHHHHH------HHHHTTSTTSSCTTTHHHHHHHHHHHHHHHHHHHHHTCCBCCCCCBTTBCT--------------
T ss_pred -eeechHHH------hhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeCCCCcCCc--------------
Confidence 11100000 000000001122210 0 0113567889999999999999853110
Q ss_pred CCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCC
Q psy6858 362 NGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYN 441 (592)
Q Consensus 362 ~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~ 441 (592)
+....+.+ . ++. .++++.++++++|.|||++||+++++|+|++|++|||||||.+..
T Consensus 335 -~~~~~e~~--~----~~~-~gls~~eal~~~T~n~A~~lg~~~~~G~l~~G~~ADlvvld~~~~--------------- 391 (418)
T 2qs8_A 335 -GTNWKEFV--Y----MVE-NGMPAMKAIQSATMETAKLLRIEDKLGSIESGKLADLIAVKGNPI--------------- 391 (418)
T ss_dssp -TCTTHHHH--H----HHH-TTCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTT---------------
T ss_pred -chHHHHHH--H----HHH-cCCCHHHHHHHHHHHHHHHhCCCCCCcccCCCCccCEEEECCChh---------------
Confidence 00011222 1 222 379999999999999999999988899999999999999998832
Q ss_pred cccCeEEeeeeeEEEECCEEEEEC
Q psy6858 442 IFEGLVCHGVPEYVIVGGRVCVDE 465 (592)
Q Consensus 442 ~~~g~~~~g~~~~Viv~GkvV~~~ 465 (592)
+.+.....+..|+++|+++...
T Consensus 392 --~~~~~~~~i~~v~~~G~~~~~~ 413 (418)
T 2qs8_A 392 --EDISVLENVDVVIKDGLLYEGH 413 (418)
T ss_dssp --TCGGGGGGEEEEEETTEEEECC
T ss_pred --hCHHHhcCccEEEECCEEEecc
Confidence 2222234688999999988643
No 45
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=100.00 E-value=1.5e-32 Score=291.06 Aligned_cols=356 Identities=19% Similarity=0.206 Sum_probs=219.4
Q ss_pred cccEEEEccEE-EcCCC----ceeeEEEEECCEEEEeecCCC-CCCC-CeEEecCCCEEeeCccccCcCcccccCCCCCh
Q psy6858 18 QNRLLIKNGKV-VNADK----ISDLDIYIENGVIQQLGRNLI-VPGG-VRVIDAAGSYVIPGGIDPHTHFELELMGATSV 90 (592)
Q Consensus 18 ~~~llIkng~I-v~~d~----~~~~dV~I~dG~I~~Ig~~~~-~~~~-~~vIDa~G~~V~PG~ID~HtH~~~~~~~~~~~ 90 (592)
|++++|+|++| ++++. ..+++|+|+||+|++|++... .+.+ .++||++|++|+|||||+|+|+..+... ..
T Consensus 1 m~~~li~n~~v~~~~~~~~~~~~~~~v~I~~g~I~~Ig~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~--~~ 78 (386)
T 2vun_A 1 MSKTIIKNIGKIVSGDIKSPVLQADTIVVEDGLIAAIGGEELMKDAGDATIIDAAGSTVTPGLLDTHVHVSGGDYA--PR 78 (386)
T ss_dssp -CEEEEESCSEEECSCTTSCEECCSEEEEETTEEEEEESGGGGTTCTTCEEEECTTCEEEECEEEEEECCCSTTEE--GG
T ss_pred CccEEEeccEEEEcCCCCccccccceEEEECCEEEEecCccccCCCCCceEEcCCCCEEccceeeccccccCCCcC--hh
Confidence 35789999999 98764 246899999999999997322 1234 6899999999999999999999642111 00
Q ss_pred hhHHHHHHHHHcCCeeEEecccc---CCCCccH--HHHHHHHHHHhccCce-eeeeccccccCCC-hHHHHHHHHHHHHc
Q psy6858 91 DDFYHGTKAAVAGGTTTIIDFAL---PRKGESL--IKTYESWRQKADEKVC-CDYALHVGITWWS-DQVQQEMAELCEKH 163 (592)
Q Consensus 91 d~~~~~~~~ala~GtTti~d~~~---~~~~~~~--~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~lv~~~ 163 (592)
.....+++.++++||||++|+.. +.....+ ..++............ ..+.++.+...+. ....++++++.+ .
T Consensus 79 ~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~ 157 (386)
T 2vun_A 79 QKTMDFISSALHGGVTTMISAGSPHFPGRPKDAAGTKALAITLSKSYYNARPAGVKVHGGAVILEKGLTEEDFIEMKK-E 157 (386)
T ss_dssp GTEESHHHHHHTTTEEEEEECCCTTSTTCCCSHHHHHHHHHHHHHHHHHCCGGGCEEECCEECCCTTCCHHHHHHHHH-T
T ss_pred HHHHHHHHHHHhCCceEEEeccccccCCChhhHHHHHHHHHHhhcccccccccceeeccCcccccCCcCHHHHHHHHH-h
Confidence 01112688999999999999862 1221222 2211111111100000 0001111100011 111256777665 4
Q ss_pred CCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHH
Q psy6858 164 GVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRA 243 (592)
Q Consensus 164 Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~ 243 (592)
|...+|.+.. + ..++++++.++++.|+++|+++.+|+++..... ...+.+ ..+
T Consensus 158 g~~~ik~~~~--~-~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~-------------------~~~~~i-----~~~ 210 (386)
T 2vun_A 158 GVWIVGEVGL--G-TIKNPEDAAPMVEWAHKHGFKVQMHTGGTSIPG-------------------SSTVTA-----DDV 210 (386)
T ss_dssp TCCEEEEETS--S-SCCSHHHHHHHHHHHHHTTCEEEEECSCCSCST-------------------TCSCCH-----HHH
T ss_pred CCCeEEEeec--C-CCCCHHHHHHHHHHHHHCCCeEEEecCCccccc-------------------cCHHHH-----HHH
Confidence 8888887742 1 125889999999999999999999996432100 001111 112
Q ss_pred HHHhcccCCCEEEEeccc---HHHHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCcccccccceecCCCCCCC
Q psy6858 244 CTIANQVDCPLYVVHIMS---KAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDE 320 (592)
Q Consensus 244 i~la~~~~~pl~i~hv~s---~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~ 320 (592)
+ +.|+. .+.|+.. ....+.++.+++. |+ .+. .+..++. . .
T Consensus 211 ~----~~G~~-~i~H~~~~~~~~~~~~~~~~~~~----g~--~vl------~~~~~g~-----------------~---~ 253 (386)
T 2vun_A 211 I----KTKPD-VVSHINGGPTAISVQEVDRIMDE----TD--FAM------EIVQCGN-----------------P---K 253 (386)
T ss_dssp H----HHCCS-EEETTTCSSSCCCHHHHHHHHHH----CC--CEE------EEESSSC-----------------H---H
T ss_pred H----HcCCC-EEEEccCCCCCCCHHHHHHHHHc----CC--eEE------EeccCCc-----------------c---c
Confidence 2 23444 3778655 1234566677777 87 440 0000110 0 1
Q ss_pred CCHHHHHHHHhcCC--ceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHH
Q psy6858 321 TTPTHLLTLLNENA--LQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAA 398 (592)
Q Consensus 321 ~~~~~l~~~l~~G~--~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~A 398 (592)
.....++.+++.|. .++++||+. .. +...|.|....+.+ .++ ..++++.++++++|.|||
T Consensus 254 ~~~~~~~~~~~~g~~d~v~lgTD~p-~~----------~~~~~~g~~~~~~~------~~~-~~~ls~~~~~~~~T~n~A 315 (386)
T 2vun_A 254 IADYVARRAAEKGQLGRVIFGNDAP-SG----------TGLIPLGILRNMCQ------IAS-MSDIDPEVAVCMATGNST 315 (386)
T ss_dssp HHHHHHHHHHHHTCGGGEEEECCBS-BT----------TBBCTTHHHHHHHH------HHH-HSCCCHHHHHHHHTHHHH
T ss_pred ccHHHHHHHHHcCCCceeEEecCCC-CC----------CCCCcchhHHHHHH------HHh-hcCCCHHHHHHHHhHHHH
Confidence 23567889999999 899999993 10 11122222222322 122 357999999999999999
Q ss_pred HHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEE--eeeeeEEEECCEEEEECCeeee
Q psy6858 399 KIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVC--HGVPEYVIVGGRVCVDEGNLRV 470 (592)
Q Consensus 399 k~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~--~g~~~~Viv~GkvV~~~g~l~~ 470 (592)
++||+ ++|+|++|++|||||||++.. +. ..++++.+.. ...|..||++|++|+++|+...
T Consensus 316 ~~lgl--~~G~i~~G~~ADlvv~d~~~~-~~---------~~~~~~~~~~~~~~~v~~v~v~G~~v~~~~~~~~ 377 (386)
T 2vun_A 316 AVYGL--NTGVIAPGKEADLIIMDTPLG-SV---------AEDAMGAIAAGDIPGISVVLIDGEAVVTKSRNTP 377 (386)
T ss_dssp HHHTC--SCSSCSTTSBCCEEEEECBTT-CS---------CSSHHHHHHHTCCCEEEEEEETTEEEESSCSSSC
T ss_pred HHcCC--CceeeCCCCeeCEEEECCCcc-cc---------cchhHHHhhccCCCceeEEEECCEEEeecCcCCC
Confidence 99999 589999999999999998842 11 2345554432 2378999999999999986544
No 46
>2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis}
Probab=100.00 E-value=2.5e-32 Score=290.64 Aligned_cols=351 Identities=16% Similarity=0.155 Sum_probs=204.8
Q ss_pred ccEEEEccEEEcCCCce-eeEEEEECCEEEEeecCCCCCCCCeEEecC-CCEEeeCccccCcCccccc-CCCCChhhHHH
Q psy6858 19 NRLLIKNGKVVNADKIS-DLDIYIENGVIQQLGRNLIVPGGVRVIDAA-GSYVIPGGIDPHTHFELEL-MGATSVDDFYH 95 (592)
Q Consensus 19 ~~llIkng~Iv~~d~~~-~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~-G~~V~PG~ID~HtH~~~~~-~~~~~~d~~~~ 95 (592)
++++|+|++|++++... +++|+|+||+|++|+++.....+.++||++ |++|+|||||+|+|+..+. ....++++++.
T Consensus 3 ~~~li~~~~v~~~~~~~~~~~v~I~~g~I~~ig~~~~~~~~~~viD~~~g~~v~PGlID~H~H~~~~~~~~~~~~e~~~~ 82 (396)
T 2vhl_A 3 ESLLIKDIAIVTENEVIKNGYVGINDGKISTVSTERPKEPYSKEIQAPADSVLLPGMIDIHIHGGYGADTMDASFSTLDI 82 (396)
T ss_dssp CCEEEEEEEEECSSCEEEEEEEEEETTEEEEEESSCCSSCCSEEEECCTTCEEEECEEEEEECEETTEEGGGCSHHHHHH
T ss_pred ccEEEEeeEEEcCCccccCceEEEECCEEEEEECCCCCCCCCceEcCCCCCEEcCCEEEEeecCCcCccccCCCHHHHHH
Confidence 57999999999987643 689999999999999321111356899999 9999999999999996541 12357888889
Q ss_pred HHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhcc-C----ceeeeeccccccCCCh-------------HHHHHHH
Q psy6858 96 GTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADE-K----VCCDYALHVGITWWSD-------------QVQQEMA 157 (592)
Q Consensus 96 ~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~-~----~~~~~~~~~~~~~~~~-------------~~~~~~~ 157 (592)
++++++++||||++|+....+...+...++.+...... . ....+++|...+...+ ...+.++
T Consensus 83 ~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 162 (396)
T 2vhl_A 83 MSSRLPEEGTTSFLATTITQEHGNISQALVNAREWKAAEESSLLGAELLGIHLEGPFVSPKRAGAQPKEWIRPSDVELFK 162 (396)
T ss_dssp HHHHGGGGTEEEEEEECCSCCHHHHHHHHHHHHHHHHHCSGGGSSSEEEEEEEECSSSCGGGCTTSCGGGCCCCCHHHHH
T ss_pred HHHHHHcCCeeEEEecccCCCHHHHHHHHHHHHHHHhcccccccccceEEEeeecCccCccccCCCCHHHccCCCHHHHH
Confidence 99999999999999996543333333344444333321 1 1234555543332221 1123444
Q ss_pred HHHHHcCCcEEEEE-EeeCCCcCCCHHHHHHHHHHHHHcCCeEEE-ecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHH
Q psy6858 158 ELCEKHGVNSFKTF-MAYKGLYMLSDGELYDAFSAIKNLGAIAMV-HAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEV 235 (592)
Q Consensus 158 ~lv~~~Gv~~~k~~-~~~~~~~~~~~~~l~~~~~~a~~~g~~~~v-Hae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~ 235 (592)
++.+. +...+|.+ ..++.. .+.++++.++++|+++.+ |+.. .++++
T Consensus 163 ~~~~~-~~~~ik~~~~~p~~~------~~~~~~~~a~~~g~~v~~gH~~~-------------------------~~~~~ 210 (396)
T 2vhl_A 163 KWQQE-AGGLIKIVTLAPEED------QHFELIRHLKDESIIASMGHTDA-------------------------DSALL 210 (396)
T ss_dssp HHHHH-TTTCEEEEEECGGGS------GGGHHHHHHHHTTCEEEECSBCC-------------------------CHHHH
T ss_pred HHHHh-cCCcceEEEECCCCC------CHHHHHHHHHHCCCEEeecccCC-------------------------CHHHH
Confidence 44432 33334422 222111 112455666666666666 6542 22222
Q ss_pred HHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCC------ceeeeeecccceeecCCCCCCCccccccc
Q psy6858 236 EAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGK------HCTLYGETLAAAVGTHANQIPCTWHDQAA 309 (592)
Q Consensus 236 e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~------~~~v~~e~~~~~l~~d~~~~~~~~~~~~~ 309 (592)
+ .+ .+.|++ +++|++..... +. .++. |+ .+.++.|.+.+++.++...
T Consensus 211 ~-----~a----~~~G~~-~i~H~~~~~~~--~~-~~~~----G~~~~~~~~~~~~~e~~~h~~~l~~~~---------- 263 (396)
T 2vhl_A 211 S-----DA----AKAGAS-HMTHLYNAMSP--FH-HREP----GVIGTALAHDGFVTELIADGIHSHPLA---------- 263 (396)
T ss_dssp H-----HH----HHTTCC-EESSTTSSBCC--CC-SSSC----HHHHHHHHCTTCEEEEECSSSSSCHHH----------
T ss_pred H-----HH----HHcCCC-EeEeCCccCcc--cc-cCCC----CchhhhhcCCCcEEEEcCCccccCHHH----------
Confidence 1 11 123454 56666432110 00 0000 11 0034555554443222111
Q ss_pred ceecCCCCCCCCCHHHHHHHHhc-CC-ceEEeCCCCCC---Ch------hhh-hcCCCCCCcCCCCCcchhhHHHHHHHh
Q psy6858 310 HVLSPPLRPDETTPTHLLTLLNE-NA-LQTTGSDNCTF---NK------NQK-ELGKDSFTHIPNGVNGVQDRLSVIWEK 377 (592)
Q Consensus 310 ~~~~pplr~~~~~~~~l~~~l~~-G~-~~~~gsD~~~~---~~------~~~-~~g~~~f~~~p~G~~g~e~~~~~~~~~ 377 (592)
+..+.+. |. .+.+.+|.... .. ... ....+.+...+.+..|.+..|...++.
T Consensus 264 ----------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~d~~~~g~~~~l~~~l~~ 327 (396)
T 2vhl_A 264 ----------------AKLAFLAKGSSKLILITDSMRAKGLKDGVYEFGGQSVTVRGRTALLSDGTLAGSILKMNEGARH 327 (396)
T ss_dssp ----------------HHHHHHHHCTTSEEEECCBCTTTTSCSEEEEETTEEEEEETTEEECTTSCBCSBCCCHHHHHHH
T ss_pred ----------------HHHHHhhcCCccEEEECcChhhcCCCCceEEECCeEEEEECCEEEeCCCcccccccCHHHHHHH
Confidence 0011111 22 12222222100 00 000 000111222334566666677777776
Q ss_pred hccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEE
Q psy6858 378 GVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIV 457 (592)
Q Consensus 378 ~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv 457 (592)
++..+++++.++++++|.|||++||+++++|+|++|++|||||||++. +|..||+
T Consensus 328 ~~~~~~~~~~~~l~~aT~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~-------------------------~v~~v~~ 382 (396)
T 2vhl_A 328 MREFTNCSWTDIANITSENAAKQLGIFDRKGSVTVGKDADLVIVSSDC-------------------------EVILTIC 382 (396)
T ss_dssp HHHHHCCCHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEECTTC-------------------------CEEEEEE
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHhCCcCCCceeCCCCcCCEEEECCCC-------------------------cEEEEEE
Confidence 766668999999999999999999998789999999999999999871 5789999
Q ss_pred CCEEEEECCeee
Q psy6858 458 GGRVCVDEGNLR 469 (592)
Q Consensus 458 ~GkvV~~~g~l~ 469 (592)
+|++|++++++.
T Consensus 383 ~G~~v~~~~~~~ 394 (396)
T 2vhl_A 383 RGNIAFISKEAD 394 (396)
T ss_dssp TTEEEEECSCCC
T ss_pred CCEEEEeccccc
Confidence 999999999874
No 47
>4ep8_C Urease subunit alpha; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1ef2_A* 4epb_C* 4epd_C* 4epe_C* 1ejx_C* 1ejw_C* 1fwj_C* 1kra_C 2kau_C* 1a5k_C 1ejv_C* 1ejt_C* 1eju_C* 1ejs_C* 1a5m_C 1a5n_C 1ejr_C* 1a5l_C 1a5o_C 1fwa_C* ...
Probab=100.00 E-value=9e-36 Score=332.16 Aligned_cols=376 Identities=18% Similarity=0.173 Sum_probs=231.9
Q ss_pred ccccEEEEccEEEcCCCceeeEEEEECCEEEEeecC----------CCCCCCCeEEecCCCEEeeCccccCcCcccccCC
Q psy6858 17 SQNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRN----------LIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMG 86 (592)
Q Consensus 17 ~~~~llIkng~Iv~~d~~~~~dV~I~dG~I~~Ig~~----------~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~ 86 (592)
..+|++|+||+|+|+++++++||+|+||||++||+. +..+.+++||||+|++|+|||||+|+|+.++...
T Consensus 63 ~~~DlvI~Na~Ivd~~Gi~kaDIlIkDGrIaaIG~ag~pd~~d~vdl~~~~g~eVIDA~GkiV~PG~ID~HvH~~~~~~~ 142 (566)
T 4ep8_C 63 DCVDLVLTNALIVDHWGIVKADIGVKDGRIFAIGKAGNPDIQPNVTIPIGAATEVIAAEGKIVTAGGIDTHIHWICPQQA 142 (566)
T ss_dssp GSCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECEECTTTCSSCCEECCTTCEEEECTTCEEEECEEEEEEECSCTTHH
T ss_pred CCCCEEEECcEEECCCCeEEeEEEEECCEEEEeecCCCcccccccccccCCCCEEEECCCCEEEcCEEEecccccCCCcc
Confidence 357999999999999999999999999999999973 2345689999999999999999999999765321
Q ss_pred CCChhhHHHHHHHHHcCCeeEEecc-------ccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChHHHHHHHHH
Q psy6858 87 ATSVDDFYHGTKAAVAGGTTTIIDF-------ALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAEL 159 (592)
Q Consensus 87 ~~~~d~~~~~~~~ala~GtTti~d~-------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 159 (592)
+ .+...+.++.... ..+............. ..+.....++++++............. +
T Consensus 143 ----~-------~a~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~-~~a~~~~~~~~~~~~~~~~~~~~~~~~---~ 207 (566)
T 4ep8_C 143 ----E-------EALVSGVTTMVGGGTGPAAGTHATTCTPGPWYISRM-LQAADSLPVNIGLLGKGNVSQPDALRE---Q 207 (566)
T ss_dssp ----H-------HHHHHTEEEEEEECSSSSHHHHHCCCCCHHHHHHHH-HHHHTTSSSEEEEEEECCCSCHHHHHH---H
T ss_pred ----c-------hhhhhhHHHHhhCceEEEEecCCCCCchHHHHHHHH-HHhccccceeeeeecccccccchhhHH---H
Confidence 1 1122233332211 1112222223333333 333345677888887776665544333 3
Q ss_pred HHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHH
Q psy6858 160 CEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEA 239 (592)
Q Consensus 160 v~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~ea 239 (592)
. ..+...++.+..+ ......+......+...+....+|.+...............+......+....+...+.++
T Consensus 208 ~-~a~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (566)
T 4ep8_C 208 V-AAGVIGLKIHEDW----GATPAAIDCALTVADEMDIQVALHSDTLNESGFVEDTLAAIGGRTIHTFHTEGAGGGHAPD 282 (566)
T ss_dssp H-HHTCSEEEEEGGG----CCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHHTTCCEEETTTTSTTSSSTTT
T ss_pred h-hhccccccccccc----cccchhhhhHhHHHHHhcchhhhhhhhHHHHHHHHhhHhhccCccccccccccchhHHHHH
Confidence 2 2377778776543 3567778888888999999999998665444333333333333332222233333333344
Q ss_pred HHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCcccccccceecCCCCCC
Q psy6858 240 VTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPD 319 (592)
Q Consensus 240 v~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~ 319 (592)
+.+....+....++.+..|.......+...... ...+++..+.... ..+ ..++.+
T Consensus 283 ~~~~~~~a~~~~~~~~~~~~~~~~~~~e~~~~~---------------~~~h~l~~~~~~~-------~~~-~~~~~~-- 337 (566)
T 4ep8_C 283 IITACAHPNILPSSTNPTLPYTLNTIDEHLDML---------------MVCHHLDPDIAED-------VAF-AESRIR-- 337 (566)
T ss_dssp GGGGGGCTTEEEEECSTTSSCBTTHHHHHHHHH---------------HHHHTCCTTCHHH-------HHH-HHHHCC--
T ss_pred HHHHHHHHhhcCCceeehhHHHHHHhhcccceE---------------EEeecccCChhhH-------Hhh-ccCCCc--
Confidence 444555555555555555555544333321111 1122222221111 011 111122
Q ss_pred CCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHH
Q psy6858 320 ETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAK 399 (592)
Q Consensus 320 ~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak 399 (592)
..+....+.++..|....+++||++.....+. +...+++.......+..++...+..++|++.++|+++|.||||
T Consensus 338 ~~~~~~~~~l~~~G~~~~i~sD~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~gls~~eal~~aTiNPAr 412 (566)
T 4ep8_C 338 RETIAAEDVLHDLGAFSLTSSDSQAMGRVGEV-----ILRTWQVAHRMKVQRGALAEETGDNDNFRVKRYIAKYTINPAL 412 (566)
T ss_dssp HHHHHHHHHHHHHTSSCEECCCTTSSSCTTCH-----HHHHHHHHHHHHHHHCSCTTCCSSSCHHHHHHHHGGGTHHHHH
T ss_pred ccchHHHHHHHhCCCcceEeeccccccccccc-----ccccCCCCchHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHH
Confidence 23445566677889999999999887654321 1111122222233333334445567789999999999999999
Q ss_pred HcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEECCEEEEE
Q psy6858 400 IFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVD 464 (592)
Q Consensus 400 ~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv~GkvV~~ 464 (592)
+|||++++|+|++||+|||||||++. | + -+|.+|+++|++||.
T Consensus 413 alGL~d~iGSIevGK~ADLVL~Dp~~-----------------f-~----vkP~~v~~~G~iv~a 455 (566)
T 4ep8_C 413 THGIAHEVGSIEVGKLADLVVWSPAF-----------------F-G----VKPATVIKGGMIAIA 455 (566)
T ss_dssp HTTCTTTSSSSCTTSBCCEEEECGGG-----------------T-T----TSCSEEEETTEEEEE
T ss_pred HhCCCCCCcCCCCCCCCCEEEECccc-----------------c-C----CCeeEEeeCCEEEEc
Confidence 99999999999999999999999872 1 1 157899999999994
No 48
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=100.00 E-value=8.2e-32 Score=293.93 Aligned_cols=381 Identities=13% Similarity=0.085 Sum_probs=230.5
Q ss_pred cccEEEEccEEEcCCC-----ceeeEEEEEC-CEEEEeecCCCC--------CCCCeEEec-CCCEEeeCccccCcCccc
Q psy6858 18 QNRLLIKNGKVVNADK-----ISDLDIYIEN-GVIQQLGRNLIV--------PGGVRVIDA-AGSYVIPGGIDPHTHFEL 82 (592)
Q Consensus 18 ~~~llIkng~Iv~~d~-----~~~~dV~I~d-G~I~~Ig~~~~~--------~~~~~vIDa-~G~~V~PG~ID~HtH~~~ 82 (592)
+++++|+|..|.+.+. ..+++|+|+| |+|++|++..+. ..+.++||+ +|++|||||||+|+|+.+
T Consensus 30 ~~~~~~~g~~i~~~~~~~~~~~~~~~v~I~~~g~I~~vg~~~~~~~~~~~~~~~~~~viD~~~g~~v~PG~ID~H~H~~~ 109 (476)
T 4aql_A 30 PLAHIFRGTFVHSTWTCPMEVLRDHLLGVSDSGKIVFLEEASQQEKLAKEWCFKPCEIRELSHHEFFMPGLVDTHIHASQ 109 (476)
T ss_dssp -CCEEEEEEEEECCSSCSCEEEEEEEEEECTTSBEEEEEEGGGHHHHHHHTTCCGGGCEECCTTCEEEECEEEEEEEGGG
T ss_pred CccEEEEccEEecCCCCceeEecCcEEEEecCCeEEEecCcchhhhhhhhccCCCceEEEcCCCCEEeCCeeccccchHH
Confidence 5689999999986532 2479999998 999999986321 235689995 599999999999999854
Q ss_pred ccCCC---------------------CChhh----HHHH-HHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCce
Q psy6858 83 ELMGA---------------------TSVDD----FYHG-TKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVC 136 (592)
Q Consensus 83 ~~~~~---------------------~~~d~----~~~~-~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~ 136 (592)
..+.. ...++ .+.+ ...++++||||+.++..... +.....++...+... +..
T Consensus 110 ~~~rg~~~d~~l~~wL~~~~~p~e~~~~~~~~~~~~~~~~~~e~l~~G~Tt~~~~~~~~~-~~~~~~~~a~~~~G~-r~~ 187 (476)
T 4aql_A 110 YSFAGSSIDLPLLEWLTKYTFPAEHRFQNIDFAEEVYTRVVRRTLKNGTTTACYFATIHT-DSSLLLADITDKFGQ-RAF 187 (476)
T ss_dssp GGGTTSCCCSCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSCH-HHHHHHHHHHHHHTC-EEE
T ss_pred HHHHHHhcCCCHHHHHHHhhhhHHHhcCCHHHHHHHHHHHHHHHHHCCeeEEEEecccCc-hHHHHHHHHHHHhCC-EEE
Confidence 32211 11222 2222 35688999999997753221 121112222222222 222
Q ss_pred eeeec---cc---cccCCChHHHHHHHHHHHH---cCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCch-
Q psy6858 137 CDYAL---HV---GITWWSDQVQQEMAELCEK---HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENG- 206 (592)
Q Consensus 137 ~~~~~---~~---~~~~~~~~~~~~~~~lv~~---~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~- 206 (592)
..+.. .. ......++..++.++++++ .+...++..++++..+.++++.|.++++.|+++|+++++|+.+.
T Consensus 188 ~~~~~~d~~~~~p~~~~~~~~~l~~~~~~i~~~~~~~~~~v~~~l~p~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~ 267 (476)
T 4aql_A 188 VGKVCMDLNDTFPEYKETTEESIKETERFVSEMLQKNYSRVKPIVTPRFSLSCSETLMGELGNIAKTRDLHIQSHISENR 267 (476)
T ss_dssp EECEECSCCSSCTTSCCCHHHHHHHHHHHHHHHHHHTCSSEEECBEECCTTTSCHHHHHHHHHHHHHTTCCEEEEESCSH
T ss_pred EeeccccCCCCCcccccCHHHHHHHHHHHHHHHhcCCCCceEEEEeCCcCCcCCHHHHHHHHHHHHHcCCceEEEecCCH
Confidence 11111 11 0111223444555555543 24557788888999899999999999999999999999997543
Q ss_pred hhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCceeee-
Q psy6858 207 EIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLY- 285 (592)
Q Consensus 207 ~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~- 285 (592)
..+....+ ..|.. .++. + .+.-....+.+..+.|+..-.. +.++.+++. |+ .+.
T Consensus 268 ~e~~~~~~---~~~~~-------~~~~----~----~~~~~g~l~~~~~~~H~~~l~~-~~~~~l~~~----g~--~v~~ 322 (476)
T 4aql_A 268 DEVEAVKN---LYPSY-------KNYT----S----VYDKNNLLTNKTVMAHGCYLSA-EELNVFHER----GA--SIAH 322 (476)
T ss_dssp HHHHHHHH---HCTTS-------SSHH----H----HHHTTTCCSTTEEEEECTTCCH-HHHHHHHHH----TC--EEEE
T ss_pred HHHHHHHH---HhCCC-------CCHH----H----HHHHcCCCCCCEEEEeCCCCCH-HHHHHHHHc----CC--EEEE
Confidence 22221111 11110 0111 0 1111223345666777663322 234555555 76 332
Q ss_pred eecccceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCCCCCc
Q psy6858 286 GETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVN 365 (592)
Q Consensus 286 ~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~ 365 (592)
+......+ +. ..+| +..+++.|+.+++|||..+.+.. .++
T Consensus 323 ~P~sn~~l---~~-------------g~~p----------~~~~~~~Gv~v~lGtD~~~~~~~-~~~------------- 362 (476)
T 4aql_A 323 CPNSNLSL---SS-------------GFLN----------VLEVLKHEVKIGLGTDVAGGYSY-SML------------- 362 (476)
T ss_dssp CHHHHHHT---TC-------------CCCC----------HHHHHHTTCEEEECCCTTTSSCC-CHH-------------
T ss_pred Cchhhhhh---Cc-------------chHH----------HHHHHHCCCcEEEeCCCCCCCCC-CHH-------------
Confidence 22211110 00 0122 34788999999999997542211 110
Q ss_pred chhhHHHHHHHhhc-----cCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCC----cccc
Q psy6858 366 GVQDRLSVIWEKGV-----VPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAK----THAH 436 (592)
Q Consensus 366 g~e~~~~~~~~~~v-----~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~----~~~~ 436 (592)
-+.++...+.+.. ...++++.++++++|.|||++||+++++|+|++|++|||||||++.... +.. .+..
T Consensus 363 -~~~~~a~~~~~~~~~~~~~~~~l~~~~al~~aT~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~-p~~~~~~~~~~ 440 (476)
T 4aql_A 363 -DAIRRAVMVSNILLINKVNEKSLTLKEVFRLATLGGSQALGLDGEIGNFEVGKEFDAILINPKASDS-PIDLFYGDFFG 440 (476)
T ss_dssp -HHHHHHHHHHHHHHHTTSSSSCCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEECTTCTTC-SCCCCTHHHHS
T ss_pred -HHHHHHHHHHhhhhcccCCCCcCCHHHHHHHHHHHHHHHhCCCCCcceeCCCCCCCEEEEcCCCCCC-ccccccccccC
Confidence 1444454444332 3468999999999999999999998889999999999999999984321 110 0112
Q ss_pred cCCCCcccCeEEee---eeeEEEECCEEEEECCe
Q psy6858 437 ACDYNIFEGLVCHG---VPEYVIVGGRVCVDEGN 467 (592)
Q Consensus 437 ~~~~~~~~g~~~~g---~~~~Viv~GkvV~~~g~ 467 (592)
....+|++.+.+.+ .|..||++||+||+.+.
T Consensus 441 ~~~~~~~~~~v~~~~~~~V~~v~v~G~~v~~~~~ 474 (476)
T 4aql_A 441 DISEAVIQKFLYLGDDRNIEEVYVGGKQVVPFSS 474 (476)
T ss_dssp SSTTHHHHHHHHHCCGGGEEEEEETTEEEECCC-
T ss_pred CchhcHHHHHhhcCCCCCccEEEECCEEEecCCC
Confidence 23466777776666 48999999999998753
No 49
>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A*
Probab=100.00 E-value=1.5e-32 Score=288.46 Aligned_cols=357 Identities=14% Similarity=0.133 Sum_probs=241.3
Q ss_pred EEEEccEEEcCCCce-eeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCccc--ccCCCCChhhHHHHH
Q psy6858 21 LLIKNGKVVNADKIS-DLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFEL--ELMGATSVDDFYHGT 97 (592)
Q Consensus 21 llIkng~Iv~~d~~~-~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~--~~~~~~~~d~~~~~~ 97 (592)
++|+|++|++++... .++|+|+||+|.+|++....+.+.++||++|++|+|||||+|+|... .++...+.+++.+++
T Consensus 5 ~~i~n~~i~~~~~~~~~~~i~I~dG~I~~i~~~~~~~~~~~viD~~G~~v~PGfID~HvHg~~G~~~~d~~~~e~l~~~~ 84 (381)
T 3iv8_A 5 YALTNCKIYTGNDVLVKHAVIINGDKIEAVCPIESLPSEMNVVDLNGANLSPGFIDLQLNGCGGVMFNDEITAETIDTMH 84 (381)
T ss_dssp EEEEEEEEECSSCEESSEEEEEETTEEEEEEEGGGSCTTCEEEEEEEEEEEECEEEEEECEETTEETTTSCSHHHHHHHH
T ss_pred EEEEccEEEcCCCeEeccEEEEECCEEEEEeCCCCCCCCCeEEECCCCEEccCeEeeeecccCCCCCCCCCCHHHHHHHH
Confidence 689999999988765 47999999999999987655567899999999999999999999743 344446788999999
Q ss_pred HHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChHHHHHHHHHHHHcCCcEEEEEEeeCCC
Q psy6858 98 KAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGL 177 (592)
Q Consensus 98 ~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~Gv~~~k~~~~~~~~ 177 (592)
++++++||||++++..+.+.+.+.++++.+++.........+++|++.+++++.. +|... ....
T Consensus 85 ~a~~~~GvTt~l~t~~T~~~e~l~~al~~~~~~~~~~~~~ilGiHlEGPfis~~~----------~Ga~~------~~~i 148 (381)
T 3iv8_A 85 KANLKSGCTSFLPTLITSSDENMRQAIAAAREYQAKYPNQSLGLHLEGPYLNVMK----------KGIHS------VDFI 148 (381)
T ss_dssp HHHHHTTEEEEEEEEESCCHHHHHHHHHHHHHHHHHCSSSBCCEEEECSSCCGGG----------CTTSC------TTTC
T ss_pred HHHHhCCccccccccCCCCHHHHHHHHHHHHHHHhcCCCceeEeeccCcccCHhh----------cCCCC------HHHc
Confidence 9999999999999988888888888888888766544456789999999998753 35421 1122
Q ss_pred cCCCHHHHHHHHHHHHHcCCeEEE-ecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEE
Q psy6858 178 YMLSDGELYDAFSAIKNLGAIAMV-HAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYV 256 (592)
Q Consensus 178 ~~~~~~~l~~~~~~a~~~g~~~~v-Hae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i 256 (592)
...+.+++.++.+.+. ++++.. .+|... .+.++++.+.|+...-||..+..+++. ++ +. .|.. ++
T Consensus 149 ~~p~~~~~~~~~~~~~--~i~~vTlAPE~~~--~~~i~~l~~~gi~vs~GHs~A~~e~~~-~a----~~----~Ga~-~~ 214 (381)
T 3iv8_A 149 RPSDDTMIDTICANSD--VIAKVTLAPENNK--PEHIEKLVKAGIVVSIGHTNATYSEAR-KS----FE----SGIT-FA 214 (381)
T ss_dssp CCCCHHHHHHHHHTTT--SEEEEEECCTTSC--HHHHHHHHHTTCEEEECSBCCCHHHHH-HH----HH----TTCC-EE
T ss_pred CCCCHHHHHHHHhccC--CeEEEEECCCCCc--HHHHHHHHHCCCEEEecCCCCCHHHHH-HH----HH----cCCC-Ee
Confidence 3456677776654332 333333 345432 566778888888888888888766654 22 22 2222 24
Q ss_pred EecccHH------HHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHH
Q psy6858 257 VHIMSKA------AGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLL 330 (592)
Q Consensus 257 ~hv~s~~------a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l 330 (592)
+|+...- ..-.+-.+-. .- .+ ...+..|+.|..+. ....++++.
T Consensus 215 THlfNaM~~~~hR~PG~vga~l~-----~~--~~-----~~elI~DG~Hv~p~------------------~~~~~~~~~ 264 (381)
T 3iv8_A 215 THLFNAMTPMVGREPGVVGAIYD-----TP--EV-----YAGIIADGFHVDYA------------------NIRIAHKIK 264 (381)
T ss_dssp SSTTSSBCCCBTTBCHHHHHHHH-----CT--TC-----EEEEECSSSSSCHH------------------HHHHHHHHH
T ss_pred eeCCCCCCCccCCCCchHHHHhc-----CC--Cc-----EEEEEcCCccCCHH------------------HHHHHHHhc
Confidence 4543210 0000111000 00 23 33456677776432 112222333
Q ss_pred hcCCceEEeCCCCCCCh---hhhhcC------CCCCCcCCCC-CcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHH
Q psy6858 331 NENALQTTGSDNCTFNK---NQKELG------KDSFTHIPNG-VNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKI 400 (592)
Q Consensus 331 ~~G~~~~~gsD~~~~~~---~~~~~g------~~~f~~~p~G-~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~ 400 (592)
|..+++-||.....- ....+| ++.......| ..|-...|...++.++...++++.++++++|.|||++
T Consensus 265 --g~~~~lvTDam~a~G~~dg~y~lgg~~v~v~~g~~~l~~g~lAGs~l~l~~~v~~~v~~~g~~~~~al~~aT~~pA~~ 342 (381)
T 3iv8_A 265 --GEKLVLVTDATAPAGAEMDYFIFVGKKVYYRDGKCVDENGTLGGSALTMIEAVQNTVEHVGIALDEALRMATLYPAKA 342 (381)
T ss_dssp --GGGEEEECCBCTTTTSCCSEEESSSCEEEEETTEEECTTCCBCSBCCCHHHHHHHHHHTTCCCHHHHHHHHTHHHHHH
T ss_pred --CCEEEEEeCcccccCCCCCeeecCCeEEEEECCEEEcCCCCccChhhhHHHHHHHHHHhhCCCHHHHHHHHHHHHHHH
Confidence 366777788643211 001111 1111122334 3455556777777788888999999999999999999
Q ss_pred cCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEECCEEEEE
Q psy6858 401 FNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVD 464 (592)
Q Consensus 401 lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv~GkvV~~ 464 (592)
||+++++|+|++|++||||+||.+. .+..||++|++||+
T Consensus 343 lg~~~~~G~i~~G~~ADlvvld~~~-------------------------~v~~t~~~G~~v~~ 381 (381)
T 3iv8_A 343 IGVDEKLGRIKKGMIANLTVFDRDF-------------------------NVKATVVNGQYEQN 381 (381)
T ss_dssp HTCTTTSSSCCTTSBCCEEEECTTC-------------------------CEEEEEETTEEEEC
T ss_pred hCCCCCCceECCCCcCCEEEECCCC-------------------------CEEEEEECCEEeeC
Confidence 9998889999999999999999761 46799999999984
No 50
>4ac7_C Urease subunit alpha; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 4ubp_C* 1ie7_C*
Probab=100.00 E-value=3.3e-33 Score=305.51 Aligned_cols=358 Identities=18% Similarity=0.153 Sum_probs=219.7
Q ss_pred cccEEEEccEEEcCCCceeeEEEEECCEEEEeecCCCC------------CCCCeEEecCCCEEeeCccccCcCcccccC
Q psy6858 18 QNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIV------------PGGVRVIDAAGSYVIPGGIDPHTHFELELM 85 (592)
Q Consensus 18 ~~~llIkng~Iv~~d~~~~~dV~I~dG~I~~Ig~~~~~------------~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~ 85 (592)
.++++|+|++|+|+.....+||+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+..|..
T Consensus 66 ~~dllI~n~~vvd~~g~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH~~~Pg~ 145 (570)
T 4ac7_C 66 VLDLLLTNALILDYTGIYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHFINPDQ 145 (570)
T ss_dssp BCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTCSSCCTTCBCCTTCEEEECTTCEEEECEEEEEEECCCTTH
T ss_pred CCCEEEECeEEECCCCcEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEecccccCCcch
Confidence 57999999999998877889999999999999985321 346799999999999999999999965531
Q ss_pred CCCChhhHHHHHHHHHcCCeeEEeccc-------cCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChHHHHHHHH
Q psy6858 86 GATSVDDFYHGTKAAVAGGTTTIIDFA-------LPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAE 158 (592)
Q Consensus 86 ~~~~~d~~~~~~~~ala~GtTti~d~~-------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (592)
.++|+++||||++++. ...+.......++.+.+.+. +..++|+++...... ..+++.+
T Consensus 146 -----------~~aAl~gGvTTvv~gg~~p~~~~n~~p~~~~~~~l~~~l~aa~-~~~v~~~~~g~~~~~---~l~el~e 210 (570)
T 4ac7_C 146 -----------VDVALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKMLKSTE-GLPINVGILGKGHGS---SIAPIME 210 (570)
T ss_dssp -----------HHHHHHTTEEEEEEECSSSCHHHHHSSCCCHHHHHHHHHHHHT-TCSSEEEEEEECCCS---SHHHHHH
T ss_pred -----------HHHHHhcCCeEEEecCcCcccccCCcCcCCcHHHHHHHHHHhh-hCCeeEEEEeccCCc---CHHHHHH
Confidence 3679999999999532 12222223344555444443 467888888765432 3567777
Q ss_pred HHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHH
Q psy6858 159 LCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAE 238 (592)
Q Consensus 159 lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~e 238 (592)
+++ .|+.+||.++.+ ..+++.++++++.|++++.++.+|+++........
T Consensus 211 l~~-aGa~gfK~~~~~----~~~~~~L~~aL~~A~~~g~~V~iHae~l~e~g~Ve------------------------- 260 (570)
T 4ac7_C 211 QID-AGAAGLKIHEDW----GATPASIDRSLTVADEADVQVAIHSDTLNEAGFLE------------------------- 260 (570)
T ss_dssp HHH-HTCCEEEEEGGG----CCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHH-------------------------
T ss_pred HHH-cCCCeEeeccCC----CCCHHHHHHHHHHHHHcCCEEEEEcCCcchhhHHH-------------------------
Confidence 765 499999998754 36899999999999999999999998632111000
Q ss_pred HHHHHHHHhcccCCCEEEEecccH---HHHHHHHHHHHHHHhcCCceeeeeecccceeecCCC--------CCCCc-ccc
Q psy6858 239 AVTRACTIANQVDCPLYVVHIMSK---AAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHAN--------QIPCT-WHD 306 (592)
Q Consensus 239 av~~~i~la~~~~~pl~i~hv~s~---~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~--------~~~~~-~~~ 306 (592)
.++.. ..+-++|..|.... .+.+.++.+... ++.|..+..+.++....-.. |.+.+ ...
T Consensus 261 ---dalea--~~Gr~ih~~HiEgag~~hapd~i~~~~~~----~vlps~t~Pt~p~~~n~~~e~ld~l~v~hhl~~~i~~ 331 (570)
T 4ac7_C 261 ---DTLRA--INGRVIHSFHVEGAGGGHAPDIMAMAGHP----NVLPSSTNPTRPFTVNTIDEHLDMLMVCHHLKQNIPE 331 (570)
T ss_dssp ---HHHHH--HTTCCEEETTTTSTTSSSTTTGGGGGGST----TEEEBCCGGGSSCBTTHHHHHHHHHHHHTTCCTTCHH
T ss_pred ---HHHHH--hCCCcceeEeeeccccccChHHHHHhccC----CccccccCCCCCcccchhHHhhhheeeecccCccccc
Confidence 11111 12445555554321 112333333222 22111111111111000000 00000 000
Q ss_pred cccceecCCCCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhc------c
Q psy6858 307 QAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGV------V 380 (592)
Q Consensus 307 ~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v------~ 380 (592)
...+.. .-+| .+...+...+++.|+.+++|||........... . ...+........... .
T Consensus 332 D~~~a~-~Rir--~~~i~a~~~L~d~G~~v~~gSD~p~~~~~ge~~-----~------~~~~~a~~~~~~rg~l~~~~~~ 397 (570)
T 4ac7_C 332 DVAFAD-SRIR--PETIAAEDILHDLGIISMMSTDALAMGRAGEMV-----L------RTWQTADKMKKQRGPLAEEKNG 397 (570)
T ss_dssp HHHHHH-HHSC--HHHHHHHHHHHHTTSSCBCCCCBTTSSCTTCHH-----H------HHHHHHHHHHHHHCSCTTCCTT
T ss_pred hhHHHH-hhhh--hhhcccccchhhcCCEEEEECcccccCCcCccc-----C------cHHHHHHHHHHhcCCCCCcccc
Confidence 000000 0012 123345557889999999999986433100000 0 000000000000010 1
Q ss_pred CCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEECCE
Q psy6858 381 PGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGR 460 (592)
Q Consensus 381 ~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv~Gk 460 (592)
...+++.++|+++|.|||+++|+++++|+|++|+.|||||||++ +|. .+|..||++|+
T Consensus 398 ~~~~~~~eal~~~T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld~d-----------------~~~-----~~v~~t~~~G~ 455 (570)
T 4ac7_C 398 SDNFRLKRYVSKYTINPAIAQGIAHEVGSIEEGKFADLVLWEPK-----------------FFG-----VKADRVIKGGI 455 (570)
T ss_dssp CCHHHHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEECGG-----------------GTT-----TSCSEEEETTE
T ss_pred ccCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCccCEEEECch-----------------hcc-----CceEEEEECCE
Confidence 34567899999999999999999888999999999999999976 221 14679999999
Q ss_pred EEEEC
Q psy6858 461 VCVDE 465 (592)
Q Consensus 461 vV~~~ 465 (592)
+||+.
T Consensus 456 ~v~~~ 460 (570)
T 4ac7_C 456 IAYAQ 460 (570)
T ss_dssp EEEEE
T ss_pred EEEcc
Confidence 99975
No 51
>4ubp_C Protein (urease (chain C)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.92.1.1 c.1.9.2 PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 1ie7_C*
Probab=100.00 E-value=3.3e-33 Score=305.51 Aligned_cols=358 Identities=18% Similarity=0.153 Sum_probs=219.3
Q ss_pred cccEEEEccEEEcCCCceeeEEEEECCEEEEeecCCCC------------CCCCeEEecCCCEEeeCccccCcCcccccC
Q psy6858 18 QNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIV------------PGGVRVIDAAGSYVIPGGIDPHTHFELELM 85 (592)
Q Consensus 18 ~~~llIkng~Iv~~d~~~~~dV~I~dG~I~~Ig~~~~~------------~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~ 85 (592)
.++++|+|++|+|+.....+||+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+..|..
T Consensus 66 ~~dllI~n~~vvd~~g~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH~~~Pg~ 145 (570)
T 4ubp_C 66 VLDLLLTNALILDYTGIYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHFINPDQ 145 (570)
T ss_dssp BCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTCTTCCTTCBCCTTCEEEECTTCEEEECEEEEEEECCCTTH
T ss_pred CCCEEEECeEEECCCCcEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEEcccCCCCcch
Confidence 57999999999998877889999999999999985321 346799999999999999999999965531
Q ss_pred CCCChhhHHHHHHHHHcCCeeEEeccc-------cCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChHHHHHHHH
Q psy6858 86 GATSVDDFYHGTKAAVAGGTTTIIDFA-------LPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAE 158 (592)
Q Consensus 86 ~~~~~d~~~~~~~~ala~GtTti~d~~-------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (592)
.++|+++||||++++. ...+.......++.+.+.+. +..++|+++...... ..+++.+
T Consensus 146 -----------~~aAl~gGvTTvv~gg~~p~~~~n~~p~~~~~~~l~~~l~aa~-~~~v~~~~~g~~~~~---~l~el~e 210 (570)
T 4ubp_C 146 -----------VDVALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKMLKSTE-GLPINVGILGKGHGS---SIAPIME 210 (570)
T ss_dssp -----------HHHHHHTTEEEEEEECCSSCHHHHHSSCCCHHHHHHHHHHHHT-TCSSEEEEEEECCCS---SHHHHHH
T ss_pred -----------HHHHHhcCCeEEEecCccccccCCCcCCCCcHHHHHHHHHHhh-hCCeeEEEEeccCCc---CHHHHHH
Confidence 3679999999999532 12222223344555444443 467888888765432 3567777
Q ss_pred HHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHH
Q psy6858 159 LCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAE 238 (592)
Q Consensus 159 lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~e 238 (592)
+++ .|+.+||.++.+ ..+++.++++++.|++++.++.+|+++........
T Consensus 211 l~~-aGa~gfK~~~~~----~~~~~~L~~aL~~A~~~g~~V~iHae~l~e~g~Ve------------------------- 260 (570)
T 4ubp_C 211 QID-AGAAGLKIHEDW----GATPASIDRSLTVADEADVQVAIHSDTLNEAGFLE------------------------- 260 (570)
T ss_dssp HHH-HTCCEEEEEGGG----CCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHH-------------------------
T ss_pred HHH-cCCCeEeeccCC----CCCHHHHHHHHHHHHHcCCEEEEEcCCcchhhHHH-------------------------
Confidence 765 499999998754 36899999999999999999999998632111000
Q ss_pred HHHHHHHHhcccCCCEEEEecccH---HHHHHHHHHHHHHHhcCCceeeeeecccceeecCCCC--------CCCc-ccc
Q psy6858 239 AVTRACTIANQVDCPLYVVHIMSK---AAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQ--------IPCT-WHD 306 (592)
Q Consensus 239 av~~~i~la~~~~~pl~i~hv~s~---~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~--------~~~~-~~~ 306 (592)
.++.. ..+-++|..|.... .+.+.++.+... ++.|..+..+.++....-..+ .+.+ ...
T Consensus 261 ---dalea--~~Gr~ih~~HiEgag~~hapd~i~~~~~~----~vlps~t~Pt~p~~~n~~~e~ld~l~v~hhl~~~i~~ 331 (570)
T 4ubp_C 261 ---DTLRA--INGRVIHSFHVEGAGGGHAPDIMAMAGHP----NVLPSSTNPTRPFTVNTIDEHLDMLMVCHHLKQNIPE 331 (570)
T ss_dssp ---HHHHH--HTTCCEEETTTTSTTSSSTTTGGGGGGST----TEEEBCCSTTSSCBTTHHHHHHHHHHHHHTCCTTSHH
T ss_pred ---HHHHH--hCCCceeEEEecccccccChHHHHHhccC----CccccccCCCCCcccchhHHhhhheeeecccCccccc
Confidence 11111 12445555554321 112333332222 221111111111100000000 0000 000
Q ss_pred cccceecCCCCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhc------c
Q psy6858 307 QAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGV------V 380 (592)
Q Consensus 307 ~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v------~ 380 (592)
...+.. .-+| .+...+...+++.|+.+++|||........... . ...+........... .
T Consensus 332 D~~~a~-~Rir--~~~i~a~~~L~d~G~~v~~gSD~p~~~~~ge~~-----~------~~~~~a~~~~~~rg~l~~~~~~ 397 (570)
T 4ubp_C 332 DVAFAD-SRIR--PETIAAEDILHDLGIISMMSTDALAMGRAGEMV-----L------RTWQTADKMKKQRGPLAEEKNG 397 (570)
T ss_dssp HHHHHH-HHSC--HHHHHHHHHHHHTTSSCBCCCCBTTSSCTTCHH-----H------HHHHHHHHHHHHHCSCTTCCSS
T ss_pred hhHHHH-hhhh--hhccccccchhhcCCEEEEECcccccCCcCccc-----C------cHHHHHHHHHHhcCCCCCcccc
Confidence 000000 0012 123345557889999999999986433100000 0 000000000000010 2
Q ss_pred CCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEECCE
Q psy6858 381 PGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGR 460 (592)
Q Consensus 381 ~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv~Gk 460 (592)
...+++.++|+++|.|||+++|+++++|+|++|+.|||||||++ +|. .+|..||++|+
T Consensus 398 ~~~~~~~eal~~~T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld~d-----------------~~~-----~~v~~t~~~G~ 455 (570)
T 4ubp_C 398 SDNFRLKRYVSKYTINPAIAQGIAHEVGSIEEGKFADLVLWEPK-----------------FFG-----VKADRVIKGGI 455 (570)
T ss_dssp CCHHHHHHHHHTTTHHHHHHHTCTTTSSSCCTTSBCCEEEECGG-----------------GTT-----TSCSEEEETTE
T ss_pred ccCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCccCEEEECcc-----------------ccc-----CCeeEEEECCE
Confidence 34567899999999999999999888999999999999999976 221 14679999999
Q ss_pred EEEEC
Q psy6858 461 VCVDE 465 (592)
Q Consensus 461 vV~~~ 465 (592)
+||+.
T Consensus 456 ~v~~~ 460 (570)
T 4ubp_C 456 IAYAQ 460 (570)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 99975
No 52
>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A*
Probab=100.00 E-value=7.7e-32 Score=288.79 Aligned_cols=352 Identities=18% Similarity=0.120 Sum_probs=204.7
Q ss_pred cccccEEEEccEEEcCCC-----c--eeeEEEEECCEEEEeecCCCCCC--CCeEEecCCCEEeeCccccCcCcccccCC
Q psy6858 16 SSQNRLLIKNGKVVNADK-----I--SDLDIYIENGVIQQLGRNLIVPG--GVRVIDAAGSYVIPGGIDPHTHFELELMG 86 (592)
Q Consensus 16 ~~~~~llIkng~Iv~~d~-----~--~~~dV~I~dG~I~~Ig~~~~~~~--~~~vIDa~G~~V~PG~ID~HtH~~~~~~~ 86 (592)
+.+|+++|+|++|++.+. . ..++|+|+||+|++||+....+. +.++||++|++|+|||||+|+|+......
T Consensus 2 ~~~~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~ 81 (416)
T 2q09_A 2 SLNCERVWLNVTPATLRSDLADYGLLEPHALGVHEGRIHALVPMQDLKGPYPAHWQDMKGKLVTPGLIDCHTHLIFAGSR 81 (416)
T ss_dssp --CCSEEEEEEEEBCCCTTSSTTCBCSSEEEEEETTEEEEEEEGGGCC--CCTTSEECTTCEEEECEEEEEECCCCCSCC
T ss_pred CCcccEEEEcCeEeccCcccccccccccceEEEECCEEEEEcChhhccccCCCeEEeCCCCEECCcccccccCcchhhhh
Confidence 345789999999998654 2 46899999999999998654443 56899999999999999999998654221
Q ss_pred -------------------------------CCChhhHHHH----HHHHHcCCeeEEeccccC-CCCccHHHHHHHHHH-
Q psy6858 87 -------------------------------ATSVDDFYHG----TKAAVAGGTTTIIDFALP-RKGESLIKTYESWRQ- 129 (592)
Q Consensus 87 -------------------------------~~~~d~~~~~----~~~ala~GtTti~d~~~~-~~~~~~~~a~~~~~~- 129 (592)
..+.++++.. .+.+++.||||+.|+... .........++.+..
T Consensus 82 ~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~ 161 (416)
T 2q09_A 82 AEEFELRQKGVPYAEIARKGGGIISTVRATRAASEDQLFELALPRVKSLIREGVTTVEIKSGYGLTLEDELKMLRVARRL 161 (416)
T ss_dssp HHHHHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHTEEEEEEECCSCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHhhhcCCcEeehhhhccCCCHHHHHHHHHHHHHHHHHcCCcEEEeccCcccChHhHHHHHHHHHHH
Confidence 1234455443 467789999999986421 111112223333322
Q ss_pred --HhccCcee-eeeccccccCC---ChHHHHHHH-HHH---HHcC-CcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCe
Q psy6858 130 --KADEKVCC-DYALHVGITWW---SDQVQQEMA-ELC---EKHG-VNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAI 198 (592)
Q Consensus 130 --~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~-~lv---~~~G-v~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~ 198 (592)
....+... ..+.|.....+ .++..+... +++ ...+ ....+.+ .+...++.+++.++++.|+++|++
T Consensus 162 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~a~~~g~~ 238 (416)
T 2q09_A 162 GEALPIRVKTTLLAAHAVPPEYRDDPDSWVETICQEIIPAAAEAGLADAVDVF---CEHIGFSLAQTEQVYLAADQYGLA 238 (416)
T ss_dssp HHHSSSEEEEEEEEETSCCGGGTTCHHHHHHHHHHTHHHHHHHTTCCSEEEEB---BSTTSBCHHHHHHHHHHHHHTTCE
T ss_pred HhhCCceEEEeeeccccCCccccCCHHHHHHHHHhhhhHHHHhcccccccccc---cCCCcCCHHHHHHHHHHHHHCCCc
Confidence 21111111 12222111111 112222211 121 1223 3444432 233356889999999999999999
Q ss_pred EEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhc
Q psy6858 199 AMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKK 278 (592)
Q Consensus 199 ~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~ 278 (592)
+.+|+...... ...+.+.+ .+. ..+.|+..-. .+.++.+++.
T Consensus 239 v~~H~~~~~~~-~~~~~~~~-------------------------------~g~-~~~~H~~~~~-~~~~~~~~~~---- 280 (416)
T 2q09_A 239 VKGHMDQLSNL-GGSTLAAN-------------------------------FGA-LSVDHLEYLD-PEGIQALAHR---- 280 (416)
T ss_dssp EEEEESSSCCC-SHHHHHHH-------------------------------TTC-SEEEECTTCC-HHHHHHHHHH----
T ss_pred EEEEECCCCch-HHHHHHHH-------------------------------cCC-CEEeecccCC-HHHHHHHHHc----
Confidence 99998642100 01111111 121 1234443211 2345555666
Q ss_pred CCceeeeeecccceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCC
Q psy6858 279 GKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFT 358 (592)
Q Consensus 279 G~~~~v~~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~ 358 (592)
|+ .+. .++.+..... . ...+| +..+++.|+.+++|||+.+....
T Consensus 281 g~--~~~--~~p~~~~~~~---------~---~~~~~----------~~~~~~~Gv~~~~gtD~~~~~~~---------- 324 (416)
T 2q09_A 281 GV--VAT--LLPTAFYFLK---------E---TKLPP----------VVALRKAGVPMAVSSDINPGTAP---------- 324 (416)
T ss_dssp TC--EEE--ECHHHHHHTT---------C---CCCCC----------HHHHHHTTCCEEECCCCBTTTBC----------
T ss_pred CC--eEE--EcCccHHhhc---------c---ccccC----------HHHHHHCCCeEEEecCCCCccCC----------
Confidence 76 332 2221111000 0 01122 34789999999999998653210
Q ss_pred cCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccC
Q psy6858 359 HIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHAC 438 (592)
Q Consensus 359 ~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~ 438 (592)
...+.. .+..++...++++.++++++|.|||++||+++++|+|++|++|||||||.+....+
T Consensus 325 -----~~~~~~----~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvvld~~~~~~~--------- 386 (416)
T 2q09_A 325 -----IVSLRM----AMNMACTLFGLTPVEAMAGVTRHAARALGEQEQLGQLRVGMLADFLVWNCGHPAEL--------- 386 (416)
T ss_dssp -----CCCHHH----HHHHHHHHHCCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSSCTTHH---------
T ss_pred -----CCCHHH----HHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCccceecCCCCCccEEEECCCchhhh---------
Confidence 001111 11123334579999999999999999999988899999999999999998743211
Q ss_pred CCCcccCeEEeeeeeEEEECCEEEEECCe
Q psy6858 439 DYNIFEGLVCHGVPEYVIVGGRVCVDEGN 467 (592)
Q Consensus 439 ~~~~~~g~~~~g~~~~Viv~GkvV~~~g~ 467 (592)
++.. ..++|..||++|++||+++-
T Consensus 387 ---~~~~--~~~~v~~v~v~G~~v~~~~~ 410 (416)
T 2q09_A 387 ---SYLI--GVDQLVSRVVNGEETLHGEG 410 (416)
T ss_dssp ---HHSC--SCCCEEEEEETTEECCC---
T ss_pred ---hhhh--ccCcceEEEECCEEEEeCCC
Confidence 2211 13478999999999998754
No 53
>2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A
Probab=100.00 E-value=2.6e-31 Score=284.97 Aligned_cols=351 Identities=15% Similarity=0.172 Sum_probs=199.5
Q ss_pred ccccEEEEc-cEEEcCCC--------------ceeeEEEEECCEEEEeecCC-C--CCCCCeEEecCCCEEeeCccccCc
Q psy6858 17 SQNRLLIKN-GKVVNADK--------------ISDLDIYIENGVIQQLGRNL-I--VPGGVRVIDAAGSYVIPGGIDPHT 78 (592)
Q Consensus 17 ~~~~llIkn-g~Iv~~d~--------------~~~~dV~I~dG~I~~Ig~~~-~--~~~~~~vIDa~G~~V~PG~ID~Ht 78 (592)
+.++++|+| |+|++.+. ...++|+|+||+|++||+.. . .+ +.++||++|++|+|||||+|+
T Consensus 3 ~~~d~li~n~g~I~t~~~~~~~~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~-~~~viD~~G~~v~PGfID~H~ 81 (421)
T 2bb0_A 3 KQIDTILINIGQLLTMESSGPRAGKSMQDLHVIEDAVVGIHEQKIVFAGQKGAEAGYE-ADEIIDCSGRLVTPGLVDPHT 81 (421)
T ss_dssp CEEEEEEEEEEEECCCCCSSCCCGGGGTCCCCEEEEEEEEETTEEEEEEETTTTTTCE-EEEEEECTTCEEEECEEECCB
T ss_pred CcccEEEECCcEEEecCCCccccccccccccccccceEEEECCEEEEEecccccccCC-CCeEEeCCCCEeccCeeccCc
Confidence 357899999 99997652 24789999999999999864 2 22 357999999999999999999
Q ss_pred CcccccCC-------------------------------CCChhhHHHH----HHHHHcCCeeEEecccc-CCCCcc---
Q psy6858 79 HFELELMG-------------------------------ATSVDDFYHG----TKAAVAGGTTTIIDFAL-PRKGES--- 119 (592)
Q Consensus 79 H~~~~~~~-------------------------------~~~~d~~~~~----~~~ala~GtTti~d~~~-~~~~~~--- 119 (592)
|+...... ..+.++++.. .+.+++.||||+.++.. ......
T Consensus 82 H~~~~~~~~~~~~~~~~g~~~~~~~~~gggi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~ 161 (421)
T 2bb0_A 82 HLVFGGSREKEMNLKLQGISYLDILAQGGGILSTVKDTRAASEEELLQKAHFHLQRMLSYGTTTAEVKSGYGLEKETELK 161 (421)
T ss_dssp CCCCCSCCGGGHHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTEEEEEEECCSCCSHHHHHH
T ss_pred CccccccchHHHHHHHhCCCHHHHhhcCCCcccchhhhhcCCHHHHHHHHHHHHHHHHhcCceEEEeccccCcCccchHH
Confidence 98543210 0233334333 36778899999988531 111111
Q ss_pred HHHHHHHHHHHhccCcee-eeeccccccCCC---hHHHHHHHHHHH---HcC-CcEEEEEEeeCCCcCCCHHHHHHHHHH
Q psy6858 120 LIKTYESWRQKADEKVCC-DYALHVGITWWS---DQVQQEMAELCE---KHG-VNSFKTFMAYKGLYMLSDGELYDAFSA 191 (592)
Q Consensus 120 ~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~lv~---~~G-v~~~k~~~~~~~~~~~~~~~l~~~~~~ 191 (592)
..+++.+.......+... ..+.|.....+. +...+.+.+++. ..+ ....+.+ . ....++.+++.++++.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~e~l~~~~~~ 238 (421)
T 2bb0_A 162 QLRVAKKLHESQPVDLVSTFMGAHAIPPEYQNDPDDFLDQMLSLLPEIKEQELASFADIF-T--ETGVFTVSQSRRYLQK 238 (421)
T ss_dssp HHHHHHHHHHHSSSEEEEEEEEESSCCGGGTTCHHHHHHHHHTTHHHHHHTTCCSEEEEB-B--CTTSBCHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCceEEEEeeccccCChhhcccHHHHHHHHHHhhHHhhccCcccccccc-C--CcCCCCHHHHHHHHHH
Confidence 222333322221111111 112221111111 112222211111 122 3333332 1 2234688999999999
Q ss_pred HHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHH
Q psy6858 192 IKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYK 271 (592)
Q Consensus 192 a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~a 271 (592)
|+++|+++.+|+...... .....+. ..+. ..+.|+..-. .+.++++
T Consensus 239 a~~~g~~v~~H~~~~~~~-~~~~~~~-------------------------------~~g~-~~~~H~~~~~-~~~i~~~ 284 (421)
T 2bb0_A 239 AAEAGFGLKIHADEIDPL-GGAELAG-------------------------------KLKA-VSADHLVGTS-DEGIKKL 284 (421)
T ss_dssp HHHTTCEEEEEECSSSCC-SHHHHHH-------------------------------HTTC-SEEEECTTCC-HHHHHHH
T ss_pred HHHCCCCEEEEecccccc-CHHHHHH-------------------------------HcCC-cEEhhhhcCC-HHHHHHH
Confidence 999999999997431100 0011111 1121 2344544222 2334555
Q ss_pred HHHHHhcCCceeeeeecc-cceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhh
Q psy6858 272 RKELMKKGKHCTLYGETL-AAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQK 350 (592)
Q Consensus 272 r~~~~~~G~~~~v~~e~~-~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~ 350 (592)
++. |+ .+..-+. ...+ .+. ..+ .+..+++.|+.+++|||+.+.+...
T Consensus 285 ~~~----g~--~~~~~p~~~~~l--~~~-------------~~~----------~~~~~~~~Gv~v~lgtD~~~~~~~~- 332 (421)
T 2bb0_A 285 AEA----GT--IAVLLPGTTFYL--GKS-------------TYA----------RARAMIDEGVCVSLATDFNPGSSPT- 332 (421)
T ss_dssp HHH----TC--EEEECHHHHHHT--TCC-------------CCC----------CHHHHHHTTCCEEECCCBBTTTBCC-
T ss_pred HHc----CC--eEEECCchhhhh--ccc-------------ccc----------hHHHHHHCCCeEEEeCCCCCCCCcc-
Confidence 555 76 3322111 1000 000 001 2347899999999999985521100
Q ss_pred hcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEec
Q psy6858 351 ELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTIS 430 (592)
Q Consensus 351 ~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~ 430 (592)
..|...+..++...++++.++|+++|.|||+++|+++++|+|++||+|||||||.+....+.
T Consensus 333 ------------------~~~~~~~~~~~~~~~ls~~eal~~~T~~~A~~lg~~~~~Gsl~~Gk~ADlvvld~~~~~~~~ 394 (421)
T 2bb0_A 333 ------------------ENIQLIMSIAALHLKMTAEEIWHAVTVNAAYAIGKGEEAGQLKAGRSADLVIWQAPNYMYIP 394 (421)
T ss_dssp ------------------CCHHHHHHHHHHHSCCCHHHHHHHTTHHHHHHTTCTTTSSCCSTTSBCCEEEESSSSTTHHH
T ss_pred ------------------cCHHHHHHHHhcccCCCHHHHHHHHHHHHHHHhCccCCccccCCCCcCCEEEECCcccccCH
Confidence 00111111233346799999999999999999999888999999999999999987432211
Q ss_pred CCcccccCCCCcccCeEEeeeeeEEEECCEEEEEC-Ceee
Q psy6858 431 AKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDE-GNLR 469 (592)
Q Consensus 431 ~~~~~~~~~~~~~~g~~~~g~~~~Viv~GkvV~~~-g~l~ 469 (592)
.. ....+|..||++|++||++ |+|+
T Consensus 395 ~~--------------~~~~~v~~t~v~G~~v~~~~g~~~ 420 (421)
T 2bb0_A 395 YH--------------YGVNHVHQVMKNGTIVVNREGAIL 420 (421)
T ss_dssp HS--------------CSSCCEEEEEETTEEEEEC-----
T ss_pred hH--------------cCCCceEEEEECCEEEEeCCcccc
Confidence 10 0012688999999999986 6653
No 54
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=99.97 E-value=1.5e-30 Score=290.85 Aligned_cols=333 Identities=23% Similarity=0.233 Sum_probs=215.6
Q ss_pred ccccEEEEccEEEcCC--CceeeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccCCCCChhhHH
Q psy6858 17 SQNRLLIKNGKVVNAD--KISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFY 94 (592)
Q Consensus 17 ~~~~llIkng~Iv~~d--~~~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~~~~~d~~~ 94 (592)
.+++++|+|++|+|.. ....+||+|+||+|++|++....+.+.++||++|++|+|||||+|+|+..+. .+.++
T Consensus 33 ~~~dlli~n~~ivd~~~~~~~~~dI~I~~G~I~~Vg~~~~~~~~~~vID~~G~~v~PG~ID~H~Hl~~~~---~~~~~-- 107 (608)
T 3nqb_A 33 QRFDVLITGGTLVDVVTGELRPADIGIVGALIASVHEPASRRDAAQVIDAGGAYVSPGLIDTHMHIESSM---ITPAA-- 107 (608)
T ss_dssp SCEEEEEESCEEECTTTCCEEECEEEEETTEEEEEECTTSCCCEEEEEECTTSEEEECEEEEEECGGGGT---SCHHH--
T ss_pred CCCCEEEECeEEEECCCCeEEeeEEEEECCEEEEecCCCCCCCCCeEEeCCCCEEecCeEecccCccccc---CCHHH--
Confidence 4679999999999975 4568999999999999998654445778999999999999999999997643 23444
Q ss_pred HHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccC-ceeee---eccccccCC----ChHHHHHHHHHHHHcCCc
Q psy6858 95 HGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEK-VCCDY---ALHVGITWW----SDQVQQEMAELCEKHGVN 166 (592)
Q Consensus 95 ~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~-~~~~~---~~~~~~~~~----~~~~~~~~~~lv~~~Gv~ 166 (592)
..+.++++||||++++..........+.++...+.+... ..+.+ +.+.....+ .....++++++++..++.
T Consensus 108 -~~~~al~~GvTtvv~~p~~~~~v~g~~~~~~~l~~a~~~~~~v~~~~p~~~P~~~~~~~~g~~~~~~el~~l~~~~~v~ 186 (608)
T 3nqb_A 108 -YAAAVVARGVTTIVWDPHEFGNVHGVDGVRWAAKAIENLPLRAILLAPSCVPSAPGLERGGADFDAAILADLLSWPEIG 186 (608)
T ss_dssp -HHHHHHTTTEEEEEECCHHHHHHHTHHHHHHHHHHHTTCSSEEEEEECCCSSSSTTSCCCSCCCCHHHHHHHHTSTTEE
T ss_pred -HHHHHHhCCeEEEEcCCccccccCCHHHHHHHHHHhhhcCcEEEEeccccCCCCCccccCcccCCHHHHHHHHhccCcc
Confidence 478899999999997642211111123333333333221 11111 111110001 112356788888767899
Q ss_pred EEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHH
Q psy6858 167 SFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTI 246 (592)
Q Consensus 167 ~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~l 246 (592)
+++.++.+.+.. ..++++.+.++.|+++|.++.+|++... ......+.+.|+..
T Consensus 187 glgE~~~~~~v~-~~d~~l~~~l~~A~~~g~pV~~Ha~~~~--~~~L~~~~~aGv~~----------------------- 240 (608)
T 3nqb_A 187 GIAEIMNMRGVI-ERDPRMSGIVQAGLAAEKLVCGHARGLK--NADLNAFMAAGVSS----------------------- 240 (608)
T ss_dssp EEEEECCHHHHH-TTCHHHHHHHHHHHHHTCEEEECCTTCC--HHHHHHHHHTTCCE-----------------------
T ss_pred eeeEeeccCCcC-CCcHHHHHHHHHHHHcCCEEEEcCCCCC--HHHHHHHHHcCCCe-----------------------
Confidence 999888765432 4678899999999999999999987532 12222333333322
Q ss_pred hcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCcccccccceecCCCCCCCCCHHHH
Q psy6858 247 ANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHL 326 (592)
Q Consensus 247 a~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l 326 (592)
.|..... .+.++.++ . |+ .+. +. ++.. .+...+
T Consensus 241 ----------~H~~~~~-eea~e~l~-~----G~--~i~-------i~--gs~~--------------------~~~~~l 273 (608)
T 3nqb_A 241 ----------DHELVSG-EDLMAKLR-A----GL--TIE-------LR--GSHD--------------------HLLPEF 273 (608)
T ss_dssp ----------ECCCCSH-HHHHHHHH-T----TC--EEE-------EE--SSSG--------------------GGHHHH
T ss_pred ----------eeccCCH-HHHHHHHH-C----CC--EEE-------Ee--cccc--------------------ccHHHH
Confidence 3433222 22222222 2 66 221 11 1111 112333
Q ss_pred HHHHh----cCCceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcC
Q psy6858 327 LTLLN----ENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFN 402 (592)
Q Consensus 327 ~~~l~----~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lg 402 (592)
...+. .|..++++||+.... ..++ +..+...+.+++.. ++++.++++++|.|||++||
T Consensus 274 ~~~i~~~~~~g~~v~lgTD~~~p~---~~~~--------------~g~l~~~v~~~~~~-Gls~~eal~~aT~n~A~~lg 335 (608)
T 3nqb_A 274 VAALNTLGHLPQTVTLCTDDVFPD---DLLQ--------------GGGLDDVVRRLVRY-GLKPEWALRAATLNAAQRLG 335 (608)
T ss_dssp HHHHHHHTSCCTTEEEECBSCCHH---HHHH--------------TCSHHHHHHHHHHT-TCCHHHHHHHHTHHHHHHHT
T ss_pred HHHHHhHhhcCceEEEecCCCCCc---chhh--------------hcchHHHHHHHHHc-CCCHHHHHHHHHHHHHHHcC
Confidence 34443 799999999974311 1110 12234444444444 79999999999999999999
Q ss_pred CCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEECCEEEEECCeeee
Q psy6858 403 LYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEGNLRV 470 (592)
Q Consensus 403 l~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv~GkvV~~~g~l~~ 470 (592)
+ +++|+|++|++||||+||.-.. + .+..||++|++|+++|+++.
T Consensus 336 l-~~~G~i~~G~~ADlvv~d~l~~-------------~----------~v~~v~~~G~~v~~~g~~~~ 379 (608)
T 3nqb_A 336 R-SDLGLIAAGRRADIVVFEDLNG-------------F----------SARHVLASGRAVAEGGRMLV 379 (608)
T ss_dssp C-TTSSCCSTTSBCCEEEESCTTT-------------C----------CEEEEEETTEEEEETTEECS
T ss_pred C-CCCcCcCCCCCccEEEECCCCC-------------C----------cceEEEECCEEEEECCeEec
Confidence 9 6799999999999999985100 0 57899999999999999864
No 55
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=99.97 E-value=5.2e-30 Score=272.98 Aligned_cols=347 Identities=18% Similarity=0.186 Sum_probs=205.2
Q ss_pred ccccccEEEEccEEEcCCC-ceeeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccCC-------
Q psy6858 15 QSSQNRLLIKNGKVVNADK-ISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMG------- 86 (592)
Q Consensus 15 ~~~~~~llIkng~Iv~~d~-~~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~------- 86 (592)
|+.+|+++|+|++|++++. ...++|+|+||+|++|++... +.+.++||++|++|+|||||+|+|+.+...+
T Consensus 1 m~~~~~~~i~~~~i~~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~~id~~g~~~~Pg~~d~h~h~~~~~~~~~~~~~~ 79 (396)
T 3ooq_A 1 MSLSVKILFKNATVFPITSRPFKGDVLVSNGKVEKVGENIE-DPDAEIVDLTGKFLFPGFVDAHSHIGLFEEGVGYYYSD 79 (396)
T ss_dssp -----CEEEEEEEECCSSSCCEEEEEEEETTEEEEEESCCC-CTTSEEEECTTCEEEECEEEEEECTTTSCTTSCGGGCC
T ss_pred CCCcceEEEECcEEEeCCCCeEEeEEEEECCEEEEecCCCC-CCCCeEEECCCCEEecCEEecccccCccccCccccccc
Confidence 3456889999999999764 346999999999999998776 6688999999999999999999999763321
Q ss_pred ----------CCChhhHH----HHHHHHHcCCeeEEeccccCCCCc---c-H---H-HHHHHHHHHhccCceeeeecccc
Q psy6858 87 ----------ATSVDDFY----HGTKAAVAGGTTTIIDFALPRKGE---S-L---I-KTYESWRQKADEKVCCDYALHVG 144 (592)
Q Consensus 87 ----------~~~~d~~~----~~~~~ala~GtTti~d~~~~~~~~---~-~---~-~a~~~~~~~~~~~~~~~~~~~~~ 144 (592)
.....+.+ .+...++++||||++++....... . . . ...............+.++.+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~gs~~~i~G~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~ 159 (396)
T 3ooq_A 80 GNEATDPVTPHVKALDGFNPQDPAIERALAGGVTSVMIVPGSANPVGGQGSVIKFRSIIVEECIVKDPAGLKMAFGENPK 159 (396)
T ss_dssp SCCTTCSBCTTCBGGGGCCTTCHHHHHHHTTTEEEEEECCCSSSSEEEEEEEEESCCSSHHHHEEEEEEEEEEECSHHHH
T ss_pred cccccCccCccccHhhhcCcCcHHHHHHHhCCeEEEeccCCCCCcccCeeEEEeccCCCHHHceecCCcEEEEEcCCCCc
Confidence 12222222 467889999999999884221000 0 0 0 00111000000011111221110
Q ss_pred c--------cCCChHHHHHHHHHHHH---c-CCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHH
Q psy6858 145 I--------TWWSDQVQQEMAELCEK---H-GVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKN 212 (592)
Q Consensus 145 ~--------~~~~~~~~~~~~~lv~~---~-Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~ 212 (592)
. +.......+.+++.... . +... ......+.. ...+...+.+..+.+.++++.+|+....
T Consensus 160 ~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~g~~-~~~~~~~e~l~~~~~~~~~v~iHa~~~~----- 231 (396)
T 3ooq_A 160 RVYGERKQTPSTRMGTAGVIRDYFTKVKNYMKKKE--LAQKEGKEF-TETDLKMEVGEMVLRKKIPARMHAHRAD----- 231 (396)
T ss_dssp HHHHHTTCSCSSHHHHHHHHHHHHHHHHHHHHHHH--HHHHTTCCC-CCCCHHHHHHHHHHTTSSCEEEEECSHH-----
T ss_pred ccccccCCCCccHHHHHHHHHHHHHHHHHHHHhhh--hhhhccCCC-CCcChhHHHHHHHHcCCCcEEEEECchh-----
Confidence 0 11111111222222211 0 0000 000000110 1122344455555688999999987642
Q ss_pred HHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCceeeeeecccce
Q psy6858 213 TQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAA 292 (592)
Q Consensus 213 ~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~ 292 (592)
.+.+++.++++.+.++.+.|+..... .++.+++. |+ .+.. ++..
T Consensus 232 --------------------------~i~~~~~~~~~~g~~~~i~H~~~~~~--~~~~l~~~----gv--~v~~--~P~~ 275 (396)
T 3ooq_A 232 --------------------------DILTAIRIAEEFGFNLVIEHGTEAYK--ISKVLAEK----KI--PVVV--GPLL 275 (396)
T ss_dssp --------------------------HHHHHHHHHHHHTCCEEEEECTTGGG--GHHHHHHH----TC--CEEE--CCCS
T ss_pred --------------------------HHHHHHHHHHHcCCCEEEecCchHHH--HHHHHHHC----CC--CEEE--Cccc
Confidence 23356666777788989999986542 35666666 87 4321 1111
Q ss_pred eecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHH
Q psy6858 293 VGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLS 372 (592)
Q Consensus 293 l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~ 372 (592)
. +...+. ++ ......+..+++.|+.++++||+...+.. .+.
T Consensus 276 ~------~~~~~~----------~~--~~~~~~~~~l~~~Gv~v~lgtD~~~~~~~---------------------~l~ 316 (396)
T 3ooq_A 276 T------FRTKLE----------LK--DLTMETIAKLLKDGVLIALMCDHPVIPLE---------------------FAT 316 (396)
T ss_dssp S------CCCSGG----------GT--TCCTTHHHHHHHTTCCEEECCTTTTSCGG---------------------GHH
T ss_pred c------cccchh----------HH--hhhhHHHHHHHHCCCEEEEEcCCCccCcc---------------------HHH
Confidence 0 000010 11 11233566789999999999998543311 111
Q ss_pred HHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEEeeee
Q psy6858 373 VIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVP 452 (592)
Q Consensus 373 ~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~ 452 (592)
..+. .....++++.++++++|.|||++||+++++|+|++|++|||||||.+. ++. ...+
T Consensus 317 ~~~~-~~~~~gl~~~~al~~~T~n~A~~lg~~~~~G~i~~G~~ADlvv~d~~~-----------------~~~---~~~v 375 (396)
T 3ooq_A 317 VQAA-TAMRYGAKEEDLLKILTVNPAKILGLEDRIGSIEPGKDADLVVWSGHP-----------------FDM---KSVV 375 (396)
T ss_dssp HHHH-HGGGGTCCHHHHHHTTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCT-----------------TST---TCCE
T ss_pred HHHH-HHHHcCCCHHHHHHHHHHHHHHHhCCCCCeeeECCCCcCCEEEECCCc-----------------ccc---ccce
Confidence 1222 223457999999999999999999998889999999999999999872 211 1367
Q ss_pred eEEEECCEEEEECC
Q psy6858 453 EYVIVGGRVCVDEG 466 (592)
Q Consensus 453 ~~Viv~GkvV~~~g 466 (592)
..||++|++|+++.
T Consensus 376 ~~v~~~G~~v~~~~ 389 (396)
T 3ooq_A 376 ERVYIDGVEVFRRE 389 (396)
T ss_dssp EEEEETTEEEEECC
T ss_pred eEEEECCEEEeCCC
Confidence 89999999999874
No 56
>2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A
Probab=99.97 E-value=3.2e-30 Score=276.24 Aligned_cols=345 Identities=18% Similarity=0.166 Sum_probs=196.6
Q ss_pred cccEEEEccEEEcCCC-----c--eeeEEEEECCEEEEeecCCCCCC----CCeEEecCCCEEeeCccccCcCcccccCC
Q psy6858 18 QNRLLIKNGKVVNADK-----I--SDLDIYIENGVIQQLGRNLIVPG----GVRVIDAAGSYVIPGGIDPHTHFELELMG 86 (592)
Q Consensus 18 ~~~llIkng~Iv~~d~-----~--~~~dV~I~dG~I~~Ig~~~~~~~----~~~vIDa~G~~V~PG~ID~HtH~~~~~~~ 86 (592)
.++++|+|++|++.+. . ..++|+|+||+|++||+....+. +.++||++|++|+|||||+|+|+......
T Consensus 14 ~~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~ 93 (419)
T 2puz_A 14 NATALWRNAQLATLNPAMDGIGAVENAVIAVRNGRIAFAGPESDLPDDLSTADETTDCGGRWITPALIDCHTHLVFGGNR 93 (419)
T ss_dssp -CEEEEEEEEEECCCTTSSTTCEEEEEEEEEETTEEEEEEETTSCCGGGSCCSEEEECTTCEEEECEEECCCCCCCSSCC
T ss_pred CCcEEEECCeEeccCcccccCCcccceEEEEECCEEEEEcChhhhhhhccCCCeEEeCCCCEeCcCceecccCccchhhh
Confidence 4689999999998654 2 47899999999999998654332 36899999999999999999998543210
Q ss_pred -------------------------------CCChhhHHH----HHHHHHcCCeeEEeccccCC-CCccHHHHHHHHHHH
Q psy6858 87 -------------------------------ATSVDDFYH----GTKAAVAGGTTTIIDFALPR-KGESLIKTYESWRQK 130 (592)
Q Consensus 87 -------------------------------~~~~d~~~~----~~~~ala~GtTti~d~~~~~-~~~~~~~a~~~~~~~ 130 (592)
..+.++++. ..+.+++.||||+.++.... ........++.++..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~ 173 (419)
T 2puz_A 94 AMEFEMRLNGATYEEIAKAGGGIVSSVRDTRALSDEVLVAQALPRLDTLLSEGVSTIEIKSGYGLDIETELKMLRVARRL 173 (419)
T ss_dssp HHHHHHHHTTCCHHHHHHTTCSHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTEEEEEEECCSCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHhcCCCeecchhhhccCCHHHHHHHHHHHHHHHHhcCCeEEEeCCCCCCCchhHHHHHHHHHHH
Confidence 012333333 23667889999998753211 111122233333332
Q ss_pred hcc-Ccee---eeeccccccCCC---hHHHHH-----HHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCe
Q psy6858 131 ADE-KVCC---DYALHVGITWWS---DQVQQE-----MAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAI 198 (592)
Q Consensus 131 ~~~-~~~~---~~~~~~~~~~~~---~~~~~~-----~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~ 198 (592)
... .... ..+.|.....+. +...+. +..+..+......+.+. ....++.+++.++++.|+++|+.
T Consensus 174 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~g~~ 250 (419)
T 2puz_A 174 ETLRPVRIVTSYLAAHATPADYKGRNADYITDVVLPGLEKAHAEGLADAVDGFC---EGIAFSVKEIDRVFAAAQQRGLP 250 (419)
T ss_dssp TTTSSCEEEEEECCTTCCCGGGTTCHHHHHHHTHHHHHHHHHHTTCCSEECCEE---STTSBCHHHHHHHHHHHHHTTCC
T ss_pred hhhcCceEEEEecccccCchhhcccHHHHHHHHHhhhhhhhhhccccccccccc---CCCCcCHHHHHHHHHHHHHCCCc
Confidence 221 1111 112222111111 111111 11111111233333221 22346889999999999999999
Q ss_pred EEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhc
Q psy6858 199 AMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKK 278 (592)
Q Consensus 199 ~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~ 278 (592)
+.+|+...... .....+.+. +. ..+.|+..-. .+.++++++.
T Consensus 251 v~~H~~~~~~~-~~~~~~~~~-------------------------------g~-~~~~H~~~~~-~~~~~~~~~~---- 292 (419)
T 2puz_A 251 VKLHAEQLSNL-GGAELAASY-------------------------------NA-LSADHLEYLD-ETGAKALAKA---- 292 (419)
T ss_dssp BEEEESSSSCC-SHHHHHHHT-------------------------------TC-SEEEECTTCC-HHHHHHHHHH----
T ss_pred EEEEecccccC-CHHHHHHhc-------------------------------CC-ceehHhccCC-HHHHHHHHHc----
Confidence 99997532100 011111111 21 2344544322 1234455555
Q ss_pred CCceeeeeec-ccceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCC
Q psy6858 279 GKHCTLYGET-LAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSF 357 (592)
Q Consensus 279 G~~~~v~~e~-~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f 357 (592)
|+ .+..-+ ....+ .+. ..+| +..+++.|+.+++|||+++.+..
T Consensus 293 g~--~~~~~p~~~~~l--~~~-------------~~~~----------~~~~~~~Gv~~~lgsD~~~~~~~--------- 336 (419)
T 2puz_A 293 GT--VAVLLPGAFYAL--REK-------------QLPP----------VQALRDAGAEIALATDCNPGTSP--------- 336 (419)
T ss_dssp TC--EEEECHHHHHHH--TCC-------------CCCC----------HHHHHHHTCCEEECCCCCSSSCC---------
T ss_pred CC--cEEECCchhhhh--ccc-------------cccc----------HHHHHHCCCeEEEECCCCCCCCc---------
Confidence 66 322111 10000 000 0112 34688999999999998753210
Q ss_pred CcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCccccc
Q psy6858 358 THIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHA 437 (592)
Q Consensus 358 ~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~ 437 (592)
...+...+. .++...+|++.++|+++|.|||++||+++++|+|++|++|||||||.+....+...
T Consensus 337 ------~~~l~~~~~----~~~~~~~ls~~~al~~~T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld~~~~~~~~~~----- 401 (419)
T 2puz_A 337 ------LTSLLLTMN----MGATLFRMTVEECLTATTRNAAKALGLLAETGTLEAGKSADFAIWDIERPAELVYR----- 401 (419)
T ss_dssp ------BCCHHHHHH----HHHHHHCCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEECCSSTTHHHHC-----
T ss_pred ------cccHHHHHH----HhccccCCCHHHHHHHHHHHHHHHcCCCCCccccCCCCcCCEEEECCCchhcchhh-----
Confidence 001122222 22233579999999999999999999988899999999999999998843221100
Q ss_pred CCCCcccCeEEeeeeeEEEECCEEEE
Q psy6858 438 CDYNIFEGLVCHGVPEYVIVGGRVCV 463 (592)
Q Consensus 438 ~~~~~~~g~~~~g~~~~Viv~GkvV~ 463 (592)
.....|..||++|++|.
T Consensus 402 ---------~~~~~v~~v~v~G~~v~ 418 (419)
T 2puz_A 402 ---------IGFNPLHARIFKGQKVS 418 (419)
T ss_dssp ---------BSCCCEEEEEETTEECC
T ss_pred ---------hcCCceEEEEECCEEcC
Confidence 01125789999999874
No 57
>3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP}
Probab=99.97 E-value=1.2e-30 Score=280.76 Aligned_cols=372 Identities=14% Similarity=0.070 Sum_probs=219.1
Q ss_pred EEEEccEEEcCCCce-eeEEEEECCEEEEeecCCCCC---CCCeEEecCCCEEeeCccccCcCcccccCCCC--------
Q psy6858 21 LLIKNGKVVNADKIS-DLDIYIENGVIQQLGRNLIVP---GGVRVIDAAGSYVIPGGIDPHTHFELELMGAT-------- 88 (592)
Q Consensus 21 llIkng~Iv~~d~~~-~~dV~I~dG~I~~Ig~~~~~~---~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~~~-------- 88 (592)
++|+|++|++++... +++|+| ||+|++||+..+.+ .+.++||++|++|+|||||+|+|+.+..+...
T Consensus 2 ~~i~~~~v~~~~~~~~~~~v~i-~g~I~~Vg~~~~~~~~~~~~~vid~~g~~v~PGlId~H~H~~~~~~rg~~~~~~l~~ 80 (427)
T 3v7p_A 2 RIIKPFAILTPQTIIQDKAVAF-DKKIEAIDTVENLIKKYPNAAVEHDENSLLLPGFANPHLHLEFSANKATLQYGDFIP 80 (427)
T ss_dssp EEEEEEEEECSSSEEESCEEEE-SSBEEEEECHHHHHHHCTTSEEEEEEEEEEEECEEEEEECGGGTTCSSCSCCSSHHH
T ss_pred EEEECCEEEcCCCEEeCcEEEE-CCEEEEecChhhhccccCCceEEeCCCCEEecCEeecccCcchhhcccccccCCHHH
Confidence 589999999987643 699999 99999999854322 46789999999999999999999976543210
Q ss_pred ------------ChhhHH----HHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChHH
Q psy6858 89 ------------SVDDFY----HGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQV 152 (592)
Q Consensus 89 ------------~~d~~~----~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (592)
..++.+ .+...++++||||+.|+..... ..+++.+ . ..+....+..........+..
T Consensus 81 wl~~~~~~~~~~~~~~~~~~~~~~~~e~l~~GvTtv~d~~~~~~---~~~a~~~---~-Gir~~~~~~~~~~~~~~~~~~ 153 (427)
T 3v7p_A 81 WLYSVIRHREDLLPLCDGACLEQTLSSIIQTGTTAIGAISSYGE---DLQACID---S-ALKVVYFNEVIGSNAATADVM 153 (427)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHTTEEEEEEEESSST---THHHHHH---B-SSEEEEEEEECBCCGGGHHHH
T ss_pred HHHHHHHhHHhcCHHHHHHHHHHHHHHHHHhCCEEEEEecCcHH---HHHHHHh---c-CCeEEEeccccCCChhhhhHH
Confidence 111222 2344578899999999854321 1222222 1 112222222111111111112
Q ss_pred HHHHHHHHHH---cCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecC-chhhhHHHHH-------HHHHcCC
Q psy6858 153 QQEMAELCEK---HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAE-NGEIIDKNTQ-------KLLAAGI 221 (592)
Q Consensus 153 ~~~~~~lv~~---~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae-~~~~i~~~~~-------~~~~~G~ 221 (592)
.+++.+.+.. .+...++..++.+..+.++++.+.++++.|+++|+++++|+. +...+....+ .+...|.
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~E~~~e~~~~~~~~g~~~~~~~~~~~ 233 (427)
T 3v7p_A 154 YASFLERFHQSKKHENERFKAAVAIHSPYSVHYILAKRALDIAKKYGSLVSVHFMESRAEREWLDKGSGEFAKFFKEFLN 233 (427)
T ss_dssp HHHHHHHHHHHHTTCBTTEEEEEEECCTTTBCHHHHHHHHHHHHHHTCCEEEEESCSHHHHHHHHHSCSHHHHHHHHHTC
T ss_pred HHHHHHHHHHhhhccCCceEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHhcCcchhhhhhhcc
Confidence 2222222222 123456777888899999999999999999999999999964 4332221111 1112222
Q ss_pred CCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCC
Q psy6858 222 KGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIP 301 (592)
Q Consensus 222 ~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~ 301 (592)
.. -...++.+ .+.+ ..+.+..+.|+..-.. +.++.+++. |+ .+ ..|+.+-...+
T Consensus 234 ~~---~~~~~~~~--------~l~~--~~~~~~~~~H~~~~~~-~~~~~l~~~----g~--~~--~~~p~s~~~~~---- 287 (427)
T 3v7p_A 234 QT---RPVNDTKS--------FLEL--FKELHTLFVHMVWANE-EEIQTIASY----NA--HI--IHCPISNRLLG---- 287 (427)
T ss_dssp CC---SCSSCHHH--------HHHT--TTTSEEEEEECTTCCH-HHHHHHHHS----EE--EE--EECHHHHHHTT----
T ss_pred CC---CcccCHHH--------HHhh--hcCCCEEEEECCCCCH-HHHHHHHHc----CC--EE--EECHHHHHHhc----
Confidence 10 00111111 0111 1355667777764432 234555555 55 32 22222110000
Q ss_pred CcccccccceecCCCCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccC
Q psy6858 302 CTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVP 381 (592)
Q Consensus 302 ~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~ 381 (592)
...+|++. + .|+.+++|||+...+.....+ -+.++...+.+. ..
T Consensus 288 ---------~~~~~~~~----------~--~Gv~v~lgtD~~~~~~~~~~~--------------~~~~~a~~~~~~-~~ 331 (427)
T 3v7p_A 288 ---------NGVLDLEK----------I--KSIPYAIATDGLSSNYSLNMY--------------EELKAALFVHPN-KE 331 (427)
T ss_dssp ---------CCCCCTTT----------T--TTSCEEECCCCTTSCSCCCHH--------------HHHHHHHHHSTT-SC
T ss_pred ---------CCCCCHHH----------H--CCCeEEEeCCCCCCCCCCCHH--------------HHHHHHHHhccC-CC
Confidence 12245553 3 899999999975443221111 144444444321 12
Q ss_pred CCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEECCEE
Q psy6858 382 GILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRV 461 (592)
Q Consensus 382 ~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv~Gkv 461 (592)
..+++.++++++|.|||++||++ +|+|++|+.|||||||++..++.+. .+|+......+.|..||++||+
T Consensus 332 ~~~~~~~~~~~~t~~~a~~~g~~--~g~l~~G~~Ad~~~~d~~~~~~~~~--------~~~~~~~~~~~~v~~v~v~G~~ 401 (427)
T 3v7p_A 332 ATTFAKELIIRATKAGYDALGFE--GGEIAVGKDADMQLIDLPEGLTNVE--------DLYLHVILHTTKPKKVYIQGEE 401 (427)
T ss_dssp HHHHHHHHHHHHTHHHHHHHTCS--CSSCCTTSBCCEEEEECCTTCCCGG--------GHHHHHHHHCSSCSEEEETTEE
T ss_pred cccCHHHHHHHHHHHHHHHhCCC--CceeCCCCccCEEEEcCCCccCCCc--------cchHHHhcccCCccEEEECCEE
Confidence 23567899999999999999994 8999999999999999986655432 2233333335689999999999
Q ss_pred EEECCeeeecC
Q psy6858 462 CVDEGNLRVAQ 472 (592)
Q Consensus 462 V~~~g~l~~~~ 472 (592)
||++|+++...
T Consensus 402 v~~~g~~~~~~ 412 (427)
T 3v7p_A 402 HVREAENLYFQ 412 (427)
T ss_dssp EEC---CCCBC
T ss_pred EEECCcccCCc
Confidence 99999986543
No 58
>4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus}
Probab=99.97 E-value=1.2e-30 Score=283.20 Aligned_cols=365 Identities=14% Similarity=0.070 Sum_probs=217.3
Q ss_pred cccEEEEccEEEcCCCceeeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccCC-----------
Q psy6858 18 QNRLLIKNGKVVNADKISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMG----------- 86 (592)
Q Consensus 18 ~~~llIkng~Iv~~d~~~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~----------- 86 (592)
+++++++|+.|.+ ....+++|+|+||+|++||+... .++||++|++|+|||||+|+|+.+..+.
T Consensus 11 m~~l~~~~~~~~~-~~~~~~~v~I~~g~I~~Ig~~~~----~~~iD~~g~~v~PGlID~H~H~~~~~~rg~~~~~~~~~~ 85 (458)
T 4f0l_A 11 QHFIHARQALLPD-GWAENVRIGIAGGVICSIETGVL----AGPDDERQSVVVAGMANLHSHAFQYGMAGLAERRGPSAD 85 (458)
T ss_dssp CEEEEEEEEEETT-EEEEEEEEEEETTEEEEEECSCC----CCTTCEEEEEEEECEEEEEECGGGGGGTTSSCBCCSCSS
T ss_pred hhHhhhcceeccC-ccccCceEEEECCEEEEEeCCCc----cccccCCCCEEccCceecccchhhhhhcccccccccCCC
Confidence 4578888887742 23457999999999999998653 3569999999999999999999543221
Q ss_pred --------------CCChhhHHHHHHH----HHcCCeeEEeccccCC--C----Cc---cHHHHHHHHHHHhccCceeee
Q psy6858 87 --------------ATSVDDFYHGTKA----AVAGGTTTIIDFALPR--K----GE---SLIKTYESWRQKADEKVCCDY 139 (592)
Q Consensus 87 --------------~~~~d~~~~~~~~----ala~GtTti~d~~~~~--~----~~---~~~~a~~~~~~~~~~~~~~~~ 139 (592)
..++++++.+++. ++++||||+.|+.... . .. ...+.+.+.......+.....
T Consensus 86 ~~~~w~~~~~~~~~~~~~e~~~~~~~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a~~~~g~r~~~~~ 165 (458)
T 4f0l_A 86 SFWSWREIMYKFALTMTPEQAEAVALRLYVDMLEAGFTRVGEFHYLHHDCDGTPYANLSEMADRIAAAATTAGMGLTLLP 165 (458)
T ss_dssp TTHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHHHHHHTCEEEEEE
T ss_pred cHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHhcCCcEEEeeeeeccccccccccchhhhHHHHHHHHHHcCCeEEEec
Confidence 1245566655443 5779999999964311 1 11 123333332222222222211
Q ss_pred eccc-----c-c--------cCCChHHHHHHHHHHHH-cCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecC
Q psy6858 140 ALHV-----G-I--------TWWSDQVQQEMAELCEK-HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAE 204 (592)
Q Consensus 140 ~~~~-----~-~--------~~~~~~~~~~~~~lv~~-~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae 204 (592)
.+.. . . ....+...+.++++... .+...+.+.++++..+.++++.+.++++.|+ |+++++|+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~--g~~v~~H~~ 243 (458)
T 4f0l_A 166 VFYAHSGFGGAAANEGQRRFINDPERFARLIEGCRKTLEGFEGAVLGVAPHSLRAVTPDELDSVTQLLP--DAPVHIHVA 243 (458)
T ss_dssp EECCEEETTTEECCGGGTTTCCCHHHHHHHHHHHHHHHTTCTTCEECBEECBTTTSCHHHHHHHTTSST--TSCEEEEES
T ss_pred chhccccccccCCchhhhhhhcCHHHHHHHHHHHHHHhccCCceEEEEecCCcCcCCHHHHHHHHHHhc--CCCEEEEeC
Confidence 1110 0 0 01112233333333322 2233455666777888899999999999988 999999975
Q ss_pred -chhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCcee
Q psy6858 205 -NGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCT 283 (592)
Q Consensus 205 -~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~ 283 (592)
....+..... ..|. +|. + .... ....+.+..+.|+..-.. +.++.+++. |+ .
T Consensus 244 e~~~~~~~~~~---~~g~---------~~~----~---~l~~-~g~l~~~~~~~H~~~~~~-~~~~~l~~~----g~--~ 296 (458)
T 4f0l_A 244 EQVKEVEDCIA---WSGK---------RPV----E---WLLD-HQDVTARWCLIHATHMSD-EETKHMAKA----GA--I 296 (458)
T ss_dssp CSHHHHHHHHH---HHSS---------CHH----H---HHHH-HSCCCTTEEEEECCSCCH-HHHHHHHHH----TC--E
T ss_pred CCHHHHHHHHH---HhCC---------CHH----H---HHHH-cCCCCCCeEEEEeccCCH-HHHHHHHHc----CC--e
Confidence 4332222211 1121 111 1 1111 123456677777764332 234555555 76 3
Q ss_pred ee-eecccceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCCC
Q psy6858 284 LY-GETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPN 362 (592)
Q Consensus 284 v~-~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~ 362 (592)
+. +......+. . ..+| +..+++.|+.+++|||....... |
T Consensus 297 ~~~~p~s~~~l~---~-------------~~~~----------~~~~~~~Gv~v~lgtD~~~~~~~--------~----- 337 (458)
T 4f0l_A 297 AGLCPVTEANLG---D-------------GTFN----------ATEFAAAGGKFGIGSDSNVLIGI--------G----- 337 (458)
T ss_dssp EEECHHHHHHTT---C-------------CCCC----------HHHHHHTTCEEEECCBTTSSCCH--------H-----
T ss_pred EEECcccccccc---C-------------CCcc----------HHHHHHCCCeEEEECCCCCCCCH--------H-----
Confidence 32 222111110 0 0112 34788999999999994221110 0
Q ss_pred CCcchhhHHHHHHHhhcc--------CCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcc
Q psy6858 363 GVNGVQDRLSVIWEKGVV--------PGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTH 434 (592)
Q Consensus 363 G~~g~e~~~~~~~~~~v~--------~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~ 434 (592)
-+.++...+.+... ...+++.++++++|.|||++||+ ++|+|++|++|||||||.+.....+.
T Consensus 338 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~~A~~lg~--~~G~l~~G~~ADlvv~d~~~~~~~~~--- 408 (458)
T 4f0l_A 338 ----DELRQLEYSQRLYHRARNVLAANEGSTGRALFDGAVLGGNIAMGR--PEDGLKKGASADFVSLDVERLPHAKG--- 408 (458)
T ss_dssp ----HHHHHHHHHHHHHHTCSSCSCSTTSBHHHHHHHHHHHHHHHHTTC--TTCSSSTTSBCCEEEEECTTSTTCCH---
T ss_pred ----HHHHHHHHHHhhhccCccccCCcccCCHHHHHHHHHHHHHHHhCC--CCCcCCCCCcCCEEEEeCCCCccCCc---
Confidence 14455555544332 23589999999999999999999 48999999999999999986544322
Q ss_pred cccCCCCcccCeEEe--eeeeEEEECCEEEEECCeee
Q psy6858 435 AHACDYNIFEGLVCH--GVPEYVIVGGRVCVDEGNLR 469 (592)
Q Consensus 435 ~~~~~~~~~~g~~~~--g~~~~Viv~GkvV~~~g~l~ 469 (592)
.+|+....+. +.|..||++|++||++|++.
T Consensus 409 -----~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~ 440 (458)
T 4f0l_A 409 -----DVVLDGWIFAGRAHVCDVWVRGVKQVEGGRHR 440 (458)
T ss_dssp -----HHHHHHHHHTSCCEEEEEEETTEEEEETTEET
T ss_pred -----ccHHHhCeEcCCCCceEEEECCEEEEECCEeC
Confidence 2333322221 17899999999999999873
No 59
>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A*
Probab=99.97 E-value=5.1e-30 Score=271.60 Aligned_cols=347 Identities=13% Similarity=0.100 Sum_probs=201.1
Q ss_pred EEEEccEEEcCCCce-eeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccc--cCC---CCChhhHH
Q psy6858 21 LLIKNGKVVNADKIS-DLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELE--LMG---ATSVDDFY 94 (592)
Q Consensus 21 llIkng~Iv~~d~~~-~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~--~~~---~~~~d~~~ 94 (592)
++|+|++|++++... +++|+|+||+|++|++....+.+.++||++|++|||||||+|+|+... +.. ..++++++
T Consensus 2 ~li~~~~v~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~g~~~~~~~~~~~~~~~~ 81 (382)
T 1yrr_A 2 YALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQRSLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVETLE 81 (382)
T ss_dssp EEEESSEEECSSCEESSEEEEEETTEEEEEEEGGGSCTTCCEEECTTCEEEECEEEEEESEETTEESSSSTTTSSHHHHH
T ss_pred EEEEeeEEEcCCceeeCCEEEEECCEEEEEecCCCCCccceeecCCCCEEccCEEEEeecccCCcCccccccCCCHHHHH
Confidence 689999999987643 689999999999999865444467899999999999999999997531 111 12667788
Q ss_pred HHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhc-cCceeeeeccccccCC-------------ChHHHHHHHHHH
Q psy6858 95 HGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKAD-EKVCCDYALHVGITWW-------------SDQVQQEMAELC 160 (592)
Q Consensus 95 ~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~~~~~~~~~~-------------~~~~~~~~~~lv 160 (592)
..++.++++||||++|+....+.....+.+..++.... .... .++.|...+.. .....+.++ +.
T Consensus 82 ~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~g~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~-~~ 159 (382)
T 1yrr_A 82 IMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQ-ALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVD-FL 159 (382)
T ss_dssp HHHHHHHHTTEEEEEEEEECCCHHHHHHHHHHHHHHHHHCTTS-BCCEEEECSSCCCSCC-CCCSCSCCHHHHHHHH-HH
T ss_pred HHHHHHHhCCeEEEEeecCCCCHHHHHHHHHHHHHHhhccCCc-eeEEEEeCCcCCccccCCCCHHHccCCCHHHHH-HH
Confidence 88899999999999998644333333333333333221 0111 12223222110 111234455 54
Q ss_pred HHcCCcEEEEEEeeCCCcCCCH-HHHHHHHHHHHHcCCeEEE-ecCchhhhHHHHHHHHHcCCCCCCCccC-------CC
Q psy6858 161 EKHGVNSFKTFMAYKGLYMLSD-GELYDAFSAIKNLGAIAMV-HAENGEIIDKNTQKLLAAGIKGPEGHQL-------SR 231 (592)
Q Consensus 161 ~~~Gv~~~k~~~~~~~~~~~~~-~~l~~~~~~a~~~g~~~~v-Hae~~~~i~~~~~~~~~~G~~~p~~~~~-------s~ 231 (592)
+ .|...+|.+. +.+ +.+.++++.|+++|+++++ |+... .+.....++.|....++... ..
T Consensus 160 ~-~~~~~ik~~~-------~~~~~~~~~~~~~a~~~g~~v~~gH~~~~---~~~~~~~~~~G~~~~~h~~~~~~~~~~~~ 228 (382)
T 1yrr_A 160 C-ENADVITKVT-------LAPEMVPAEVISKLANAGIVVSAGHSNAT---LKEAKAGFRAGITFATHLYNAMPYITGRE 228 (382)
T ss_dssp H-HTTTTEEEEE-------ECGGGSCHHHHHHHHHTTCEEEECSCCCC---HHHHHHHHHHTCCEESSTTTTSCCBCSSC
T ss_pred H-hcCCCEEEEE-------ECCCCChHHHHHHHHHCCCEEEEECCCCC---HHHHHHHHHcCCCeeEECCCCCCccccCC
Confidence 4 3776777642 122 3345789999999999998 98632 22345566678776554432 12
Q ss_pred cHHHHHHHHHHHHHHhcccCCC-EEEEecc--cHHHHHHHHHHHHHHHhcC-CceeeeeecccceeecCCCCCCCccccc
Q psy6858 232 PEEVEAEAVTRACTIANQVDCP-LYVVHIM--SKAAGDAMAYKRKELMKKG-KHCTLYGETLAAAVGTHANQIPCTWHDQ 307 (592)
Q Consensus 232 p~~~e~eav~~~i~la~~~~~p-l~i~hv~--s~~a~~~i~~ar~~~~~~G-~~~~v~~e~~~~~l~~d~~~~~~~~~~~ 307 (592)
+..+. ..+ .. .++- -.+.|.. +.+..+.+.++ | .. ..++.-. ....+ .. .
T Consensus 229 ~g~~~-----~~l--~~-~~~~~~~~~h~~~~~~~~~~~~~~~-------~~~~-~~~~~d~---~~~~g---~~----~ 282 (382)
T 1yrr_A 229 PGLAG-----AIL--DE-ADIYCGIIADGLHVDYANIRNAKRL-------KGDK-LCLVTDA---TAPAG---AN----I 282 (382)
T ss_dssp CHHHH-----HHH--HC-TTCEEEEECSSSSSCHHHHHHHHHH-------HGGG-EEEECCB---CTTTT---SC----C
T ss_pred cchhh-----Hhh--cC-CcceeeecCcccccCHHHHHHHHHc-------CCCc-EEEECcC---hHhcC---CC----C
Confidence 22221 111 11 0110 0223332 33434443332 3 10 1111100 00000 00 0
Q ss_pred ccceecCCCCCCCCCHHHHHHHHhcCCce-EEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCH
Q psy6858 308 AAHVLSPPLRPDETTPTHLLTLLNENALQ-TTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSP 386 (592)
Q Consensus 308 ~~~~~~pplr~~~~~~~~l~~~l~~G~~~-~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~ 386 (592)
..+.. +. +..+++.|+.+ ..|||.... ..|...++.++...++++
T Consensus 283 ~~~~~----~~-------~~~~~~~Gv~~~~~Gt~~g~~-----------------------~~~~~~~~~~~~~~g~~~ 328 (382)
T 1yrr_A 283 EQFIF----AG-------KTIYYRNGLCVDENGTLSGSS-----------------------LTMIEGVRNLVEHCGIAL 328 (382)
T ss_dssp SEEEE----TT-------EEEEECSSCEECTTCCEEEBC-----------------------CCHHHHHHHHHHHHCCCH
T ss_pred ceEEE----CC-------EEEEEECCEEEeCCCcCcCCc-----------------------cCHHHHHHHHHHHhCCCH
Confidence 01100 00 11356677654 223332110 001111112222347999
Q ss_pred HHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEECCEEEEEC
Q psy6858 387 EKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDE 465 (592)
Q Consensus 387 ~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv~GkvV~~~ 465 (592)
.++++++|.|||++||+++++|+|++|++|||||||.+. ++..||++|++|+++
T Consensus 329 ~~al~~aT~~~A~~lg~~~~~G~i~~G~~ADlvvld~~~-------------------------~v~~v~~~G~~v~~~ 382 (382)
T 1yrr_A 329 DEVLRMATLYPARAIGVEKRLGTLAAGKVANLTAFTPDF-------------------------KITKTIVNGNEVVTQ 382 (382)
T ss_dssp HHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEECTTS-------------------------CEEEEEETTEEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCCCCccCCCCCCCEEEECCCC-------------------------CEEEEEECCEEEEeC
Confidence 999999999999999998889999999999999999871 468999999999975
No 60
>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A*
Probab=99.97 E-value=6.4e-30 Score=277.28 Aligned_cols=363 Identities=16% Similarity=0.122 Sum_probs=216.2
Q ss_pred cEEEEccEEEcCCCc-eeeEEEE-ECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccC------------
Q psy6858 20 RLLIKNGKVVNADKI-SDLDIYI-ENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELM------------ 85 (592)
Q Consensus 20 ~llIkng~Iv~~d~~-~~~dV~I-~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~------------ 85 (592)
..++ .++++.++.. .+++|+| +||+|++|++.... ..++|++| +|||||||+|+|+.+..+
T Consensus 2 ~~~~-~~~~~~~~~~~~~~~v~i~~~g~I~~ig~~~~~---~~~~d~~g-~v~PGfId~H~H~~~~~~rg~~~~~~~~~~ 76 (453)
T 3mdu_A 2 SAIF-AERALLPEGWARNVRFEISADGVLAEIRPDANA---DGAERLGG-AVLPGMPNLHSHAFQRAMAGLAEVAGNPND 76 (453)
T ss_dssp CEEE-EEEEEETTEEEEEEEEEECTTSBEEEEESSCCC---TTSEECSS-CEEECEEEEEECGGGGGGTTTTCCCSSTTC
T ss_pred cccc-hhheecCCceecCeEEEEecCCEEEEecCCCCc---ccccccCC-cccccceecccchHHHhhccccccccCCCC
Confidence 3444 4455555544 5799999 89999999987543 24679999 999999999999854322
Q ss_pred -------------CCCChhhHHHHHHH----HHcCCeeEEeccccCC--C-C------ccHHHHHHHHHHHhccCceeee
Q psy6858 86 -------------GATSVDDFYHGTKA----AVAGGTTTIIDFALPR--K-G------ESLIKTYESWRQKADEKVCCDY 139 (592)
Q Consensus 86 -------------~~~~~d~~~~~~~~----ala~GtTti~d~~~~~--~-~------~~~~~a~~~~~~~~~~~~~~~~ 139 (592)
...++++++.+++. ++++||||+.|+.... . + ....++..+.......+.....
T Consensus 77 ~l~~wl~~~~~~~~~~~~e~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a~~~~Gir~~~~~ 156 (453)
T 3mdu_A 77 SFWTWRELMYRMVARLSPEQIEVIACQLYIEMLKAGYTAVAEFHYVHHDLDGRSYADPAELSLRISRAASAAGIGLTLLP 156 (453)
T ss_dssp CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHHHHHHTCEEEEEE
T ss_pred cHHHHHHHHhhhhhhCCHHHHHHHHHHHHHHHHHcCCcEEEEeeEeccccccccccchhhHHHHHHHHHHHhCCeEEEec
Confidence 22456677766655 6789999999974321 1 1 1112222222222222222211
Q ss_pred eccc--cc------------cCCChHHHHHHHHHHH---HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEe
Q psy6858 140 ALHV--GI------------TWWSDQVQQEMAELCE---KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVH 202 (592)
Q Consensus 140 ~~~~--~~------------~~~~~~~~~~~~~lv~---~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vH 202 (592)
.+.. .. ....+...+.++++.. ..+. .+.++++..+.+++++|.++++.|+ .|+++++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~e~l~~~~~~A~-~g~~v~~H 232 (453)
T 3mdu_A 157 VLYSHAGFGGQPASEGQRRFINGSEAYLELLQRLRAPLEAAGH---SLGLCFHSLRAVTPQQIATVLAAGH-DDLPVHIH 232 (453)
T ss_dssp CBCCBSSTTTCBCCGGGGGGCCCHHHHHHHHHHHHHHHHHHTC---EECEEEEETTTSCHHHHHHHHTSSC-TTSCEEEE
T ss_pred chhccccccCCCCchhhhhccCCHHHHHHHHHHHHHHhhcCCC---eEEEecCCCCcCCHHHHHHHHHHHh-cCCCEEEE
Confidence 1110 00 0111223333333332 2232 5555677778899999999999999 99999999
Q ss_pred c-CchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCc
Q psy6858 203 A-ENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKH 281 (592)
Q Consensus 203 a-e~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~ 281 (592)
+ |+...+....+. .|.. | +.... -....+.+..+.|+..-. .+.++.+++. |+
T Consensus 233 ~~e~~~e~~~~~~~---~g~~---------~-------v~~l~-~~g~~~~~~~~~H~~~~~-~~~i~~la~~----g~- 286 (453)
T 3mdu_A 233 IAEQQKEVDDCQAW---SGRR---------P-------LQWLY-ENVAVDQRWCLVHATHAD-PAEVAAMARS----GA- 286 (453)
T ss_dssp ESCSHHHHHHHHHH---HSSC---------H-------HHHHH-HHSCCCTTEEEEECCSCC-HHHHHHHHHH----TC-
T ss_pred eCCCHHHHHHHHHH---hCCC---------H-------HHHHH-HcCCCCCCeEEEEcCCCC-HHHHHHHHHc----CC-
Confidence 6 443323222211 1211 1 11111 122345567777776432 2335555566 77
Q ss_pred eeee-eecccceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcC
Q psy6858 282 CTLY-GETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHI 360 (592)
Q Consensus 282 ~~v~-~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~ 360 (592)
.+. +......+ +. ..+| +.++++.|+.+++|||....... |
T Consensus 287 -~v~~~P~sn~~l---g~-------------g~~p----------~~~~~~~Gv~v~lgtD~~~~~~~--------~--- 328 (453)
T 3mdu_A 287 -VAGLCLSTEANL---GD-------------GIFP----------ATDFLAQGGRLGIGSDSHVSLSV--------V--- 328 (453)
T ss_dssp -EEEECHHHHHHT---TC-------------CCCC----------HHHHHHTTCEEEECCBTCSCCCH--------H---
T ss_pred -EEEECchhHhhc---CC-------------CCCC----------HHHHHHCCCEEEEECCCCCCCCH--------H---
Confidence 332 22211111 00 1122 34788999999999995321111 0
Q ss_pred CCCCcchhhHHHHHHHhhcc---------CCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecC
Q psy6858 361 PNGVNGVQDRLSVIWEKGVV---------PGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISA 431 (592)
Q Consensus 361 p~G~~g~e~~~~~~~~~~v~---------~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~ 431 (592)
-+.++.....+... ..++++.++++++|.|||++||+ ++|+|++|+.|||||||.+.+...+.
T Consensus 329 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~~~--~~G~l~~G~~AD~~~~d~~~~~~~~~ 400 (453)
T 3mdu_A 329 ------EELRWLEYGQRLRDRKRNRLYRDDQPMIGRTLYDAALAGGAQALGQ--PIGSLAVGRRADLLVLDGNDPYLASA 400 (453)
T ss_dssp ------HHHHHHHHHHHHHHTCSCCSCBTTBCCHHHHHHHHHHHHHHHHHTS--SCSSCCTTSBCCEEEECTTCHHHHTC
T ss_pred ------HHHHHHHHHHhhhccCCccccCcccCCCHHHHHHHHHHHHHHHhCC--CCCccCCCCcCCEEEEeCCCccccCC
Confidence 03344433333221 12689999999999999999999 68999999999999999985543311
Q ss_pred CcccccCCCCcccCeEEe---eeeeEEEECCEEEEECCeee
Q psy6858 432 KTHAHACDYNIFEGLVCH---GVPEYVIVGGRVCVDEGNLR 469 (592)
Q Consensus 432 ~~~~~~~~~~~~~g~~~~---g~~~~Viv~GkvV~~~g~l~ 469 (592)
...+|+..+.+. +.|..||++|++||++|++.
T Consensus 401 ------~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~~g~~~ 435 (453)
T 3mdu_A 401 ------EGDALLNRWLFAGGDRQVRDVMVAGRWVVRDGRHA 435 (453)
T ss_dssp ------CHHHHHHHHHHHCCGGGEEEEEETTEEEEBTTBCT
T ss_pred ------CccChHHHheeeCCCCCeeEEEECCEEEEECCccC
Confidence 123555554443 47899999999999999874
No 61
>2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16
Probab=99.97 E-value=4.9e-30 Score=275.33 Aligned_cols=338 Identities=10% Similarity=0.055 Sum_probs=195.6
Q ss_pred ccccEEEEccEEEcCCC--ceeeEEEEECCEEEEeecCCCC---CCCCeEEecCCCEEeeCccccCcCcccccC------
Q psy6858 17 SQNRLLIKNGKVVNADK--ISDLDIYIENGVIQQLGRNLIV---PGGVRVIDAAGSYVIPGGIDPHTHFELELM------ 85 (592)
Q Consensus 17 ~~~~llIkng~Iv~~d~--~~~~dV~I~dG~I~~Ig~~~~~---~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~------ 85 (592)
++++++|+|++|++++. ..+++|+|+||+|++||+.... +.+.++||++ ++|||||||+|+|+.....
T Consensus 35 ~~~~~li~n~~v~~~~~~~~~~~~V~I~~g~I~~vg~~~~~~~~~~~~~viD~~-~~v~PGlID~H~H~~~~~~~g~~~~ 113 (420)
T 2imr_A 35 AHTPRLLTCDVLYTGMGGAQSPGGVVVVGETVAAAGHPDELRRQYPHAAEERAG-AVIAPPPVNAHTHLDMSAYEFQALP 113 (420)
T ss_dssp -CCEEEEEESEEECC---EESSEEEEEETTEEEEEECHHHHHHHCTTCEEEECC-SEESSCCCEEEEESSCCHHHHHHCH
T ss_pred ccccEEEECCEEEeCCCCeeeccEEEEECCEEEEecCcccccccCCCCeeecCC-eEECCCCEecCcCcchhhhhhccCC
Confidence 45689999999999874 3468999999999999975322 1356899999 9999999999999965311
Q ss_pred --CC-----------CChhhHHHHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChHH
Q psy6858 86 --GA-----------TSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQV 152 (592)
Q Consensus 86 --~~-----------~~~d~~~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (592)
.. ..+.....+++.++++||||++|+... .+.++........+....+++....+.+..+.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~------~~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~ 187 (420)
T 2imr_A 114 YFQWIPEVVIRGRHLRGVAAAQAGADTLTRLGAGGVGDIVWA------PEVMDALLAREDLSGTLYFEVLNPFPDKADEV 187 (420)
T ss_dssp HHHTSHHHHHHHTTCCHHHHHHHHHHHHHHTTCCCEEEEECS------HHHHHHHHTCTTCCEEEEEEECBCCGGGHHHH
T ss_pred HHHHHHHhhhhhhhccCHHHHHHHHHHHHhcCcEEEEEccCC------HHHHHHHHHhcCcEEEEEeeecCCCchhhHHH
Confidence 00 011223456678899999999998531 12333211111122333333221000111112
Q ss_pred HHHHHHHHHH---cCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHc-CCC------
Q psy6858 153 QQEMAELCEK---HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAA-GIK------ 222 (592)
Q Consensus 153 ~~~~~~lv~~---~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~-G~~------ 222 (592)
.+++.++++. .+...++++++++..+.++++++.++++.|+++|+++++|+.... .....+.+. |..
T Consensus 188 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e~~---~~~~~~~~~~g~~~~~~~~ 264 (420)
T 2imr_A 188 FAAARTHLERWRRLERPGLRLGLSPHTPFTVSHRLMRLLSDYAAGEGLPLQIHVAEHP---TELEMFRTGGGPLWDNRMP 264 (420)
T ss_dssp HHHHHHHHHHHHTTCBTTEEEEEEECCSSSBCHHHHHHHHHHHHHHTCCBEEEESCSH---HHHHHHHHSCSTTGGGSCG
T ss_pred HHHHHHHHHHHhcccCCceEEEecCCcCCCcCHHHHHHHHHHHHHCCCcEEEEeCCCH---HHHHHHHHhhccccccccc
Confidence 3444444443 123456888888877788999999999999999999999995432 112222221 211
Q ss_pred --CCCC---------ccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCceeeeeecccc
Q psy6858 223 --GPEG---------HQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAA 291 (592)
Q Consensus 223 --~p~~---------~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~ 291 (592)
.+.+ ..-.++ ++ .+ +...+.....+..|.+|+. . +.++.+++. |+ . .+.|+.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~--~~--~~-~~~g~l~~~~~i~H~~~l~-~---~~i~~l~~~----g~--~--~~~~p~ 327 (420)
T 2imr_A 265 ALYPHTLAEVIGREPGPDLTP--VR--YL-DELGVLAARPTLVHMVNVT-P---DDIARVARA----GC--A--VVTCPR 327 (420)
T ss_dssp GGSCSSHHHHHTSCCCTTCCH--HH--HH-HHHTCGGGCCEEEECCSCC-H---HHHHHHHHH----TC--C--EEECHH
T ss_pred cchhhhhhhhccccccCCCCH--HH--HH-HHcCCCCCCeEEEecCcCC-H---HHHHHHHHc----CC--e--EEECHH
Confidence 0000 000111 11 11 1111111112334444443 2 235555556 76 3 233332
Q ss_pred eeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHH
Q psy6858 292 AVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRL 371 (592)
Q Consensus 292 ~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~ 371 (592)
+... +. ...||++ ++++.|+.+++|||+++.+..... ...+
T Consensus 328 ~~~~--------~~-----~~~~~l~----------~~~~~Gv~~~lgtD~~~~~~~~~~----------------~~~~ 368 (420)
T 2imr_A 328 SNHH--------LE-----CGTFDWP----------AFAAAGVEVALGTDSVASGETLNV----------------REEV 368 (420)
T ss_dssp HHHH--------TT-----CCCCCHH----------HHHHTTCCEEECCCCHHHHSCSCT----------------HHHH
T ss_pred HHHH--------hc-----cCCCCHH----------HHHHCCCeEEEECCCCccCCCCCH----------------HHHH
Confidence 2110 00 0124443 689999999999999643111000 1111
Q ss_pred HHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCC
Q psy6858 372 SVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYK 424 (592)
Q Consensus 372 ~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~ 424 (592)
...++ ...++++.++++++|.|||++||+++++|+|++|++||| |||++
T Consensus 369 ~~~~~---~~~~ls~~~al~~aT~n~A~~lgl~~~~GsL~~Gk~ADl-vvd~~ 417 (420)
T 2imr_A 369 TFARQ---LYPGLDPRVLVRAAVKGGQRVVGGRTPFLRRGETWQEGF-RWELS 417 (420)
T ss_dssp HHHHH---HCTTSCHHHHHHHHHHHHHHHHC--CCCCSTTSBCCGGG-BGGGC
T ss_pred HHHHh---cCCCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCccCE-EEECC
Confidence 11222 125799999999999999999999888999999999999 78876
No 62
>3mtw_A L-arginine carboxypeptidase CC2672; hydrolase; HET: KCX M3R; 1.70A {Caulobacter vibrioides}
Probab=99.96 E-value=2.3e-28 Score=253.67 Aligned_cols=355 Identities=17% Similarity=0.195 Sum_probs=195.8
Q ss_pred cEEEEccEEEcCCC---ceeeEEEEECCEEEEeecCCC-CCCCCeEEecCCCEEeeCccccCcCcccccCCCC-----Ch
Q psy6858 20 RLLIKNGKVVNADK---ISDLDIYIENGVIQQLGRNLI-VPGGVRVIDAAGSYVIPGGIDPHTHFELELMGAT-----SV 90 (592)
Q Consensus 20 ~llIkng~Iv~~d~---~~~~dV~I~dG~I~~Ig~~~~-~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~~~-----~~ 90 (592)
.++|+|++|+|+.. ..+++|+|+||||++||++.+ .+.+.++||++|++|+|||||+|+|+........ ..
T Consensus 3 ~~aI~narviD~~~g~~i~~~~V~I~dG~I~~Ig~~~~~~~~~~~vID~~G~~v~PG~ID~H~H~~~~~~~~~~~~~~~~ 82 (403)
T 3mtw_A 3 IKAVSAARLLDVASGKYVDNPLVIVTDGRITSIGKKGDAVPAGATAVDLPGVTLLPGLIDMHVHLDSLAEVGGYNSLEYS 82 (403)
T ss_dssp EEEEEEEEEEETTTTEEEESEEEEEETTEEEEEEETTCCCCTTCEEEEEEEEEEEECEEEEEECTTCCTTCCGGGGGGSC
T ss_pred cEEEEceEEEECCCCcEecCcEEEEECCEEEEEeCCCCCCCCCCEEEECCCCEEEeChheeeeCCccccccCcccccccc
Confidence 36899999998743 246999999999999998654 3567899999999999999999999865433211 11
Q ss_pred hhHH-----HHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhc-cCcee-eeecc-------cc------------
Q psy6858 91 DDFY-----HGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKAD-EKVCC-DYALH-------VG------------ 144 (592)
Q Consensus 91 d~~~-----~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~-~~~~~-~~~~~-------~~------------ 144 (592)
+.+. ......+..++|+..+...... . ............ ..... ..+.. ..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (403)
T 3mtw_A 83 DRFWSVVQTANAKKTLEAGFTTVRNVGAADY--D-DVGLREAIDAGYVPGPRIVTAAISFGATGGHCDSTFFPPSMDQKN 159 (403)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEEEEECCCSTT--H-HHHHHHHHHTTSSCCCEEEECCSCEESTTSTTSCCSSCGGGCCCC
T ss_pred HHHHhhhhhhhhhhccccccceeeccccccc--c-chhhhhhhhcccccccccccccccccccccccccccccccccccc
Confidence 1111 1233456789999987643321 1 111111111111 11111 00000 00
Q ss_pred -ccCCChHHHHHHHHHHHHcCCcEEEEEEee--------CCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHH
Q psy6858 145 -ITWWSDQVQQEMAELCEKHGVNSFKTFMAY--------KGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQK 215 (592)
Q Consensus 145 -~~~~~~~~~~~~~~lv~~~Gv~~~k~~~~~--------~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~ 215 (592)
...................+....+..... ........+++.++++.+++.+..+.+|..... ....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~----~~~~ 235 (403)
T 3mtw_A 160 PFNSDSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHAHGAS----GIRE 235 (403)
T ss_dssp TTCCCSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEECSHH----HHHH
T ss_pred ccccchhHHHhhhhHhhhhhcchhhhhhhccccccccccccccccCHHHHHHHHHHHHHcCCeEEEEeccch----hHHH
Confidence 000011111111112223455554443221 122345778899999999999999999987643 3334
Q ss_pred HHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCceeeeeecccceeec
Q psy6858 216 LLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGT 295 (592)
Q Consensus 216 ~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~ 295 (592)
.+..+................. ..... . +..+... ............ +. .. ..+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~----~--~~~~~~~-~~~~~~~~~~~~----~~--~~--~~~~----- 290 (403)
T 3mtw_A 236 AVRAGVDTIEHASLVDDEGIKL-----AVQKG----A--YFSMDIY-NTDYTQAEGKKN----GV--LE--DNLR----- 290 (403)
T ss_dssp HHHTTCSEEEECTTCCHHHHHH-----HHHHT----C--EEECCCS-THHHHHHHHHHH----TC--CH--HHHH-----
T ss_pred HHHhcccccccccccccchhhh-----hcccc----c--eeeeeec-cchhhhhhhhcc----cc--ch--hhcc-----
Confidence 4455544333222222221111 10000 0 1111111 111111112222 22 00 0000
Q ss_pred CCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHH
Q psy6858 296 HANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIW 375 (592)
Q Consensus 296 d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~ 375 (592)
..... . ......+..+++.|....+|||......... ..+ +..
T Consensus 291 ------~~~~~--~----------~~~~~~~~~~~~~g~~~~~gt~~~~~~~~~~---------------~~~--~~~-- 333 (403)
T 3mtw_A 291 ------KDRDI--G----------ELQRENFRKALKAGVKMVYGTDAGIYPHGDN---------------AKQ--FAV-- 333 (403)
T ss_dssp ------HHHHH--H----------HHHHHHHHHHHHHTCEEECCCCBTTBCTTCG---------------GGH--HHH--
T ss_pred ------ccccc--c----------ccccchhhHHHhcCCeEeeccCCcccccchH---------------HHH--HHH--
Confidence 00000 0 0112344567888999999999765432111 001 111
Q ss_pred HhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEE
Q psy6858 376 EKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYV 455 (592)
Q Consensus 376 ~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~V 455 (592)
+ ...+|++.|+|+++|.|||++||+++++|+|++|++|||||||.| |++.+....+|.+|
T Consensus 334 --~-~~~gls~~eal~~~T~npA~~lgl~~~~GsI~~G~~ADlvvld~d-----------------Pl~di~~~~~v~~V 393 (403)
T 3mtw_A 334 --M-VRYGATPLQAIQSATLTAAEALGRSKDVGQVAVGRYGDMIAVAGD-----------------PLADVTTLEKPVFV 393 (403)
T ss_dssp --H-HHTTCCHHHHHHHTTHHHHHHHTCTTTSSSCCTTSBCCEEEESSC-----------------TTTCGGGGGSCSEE
T ss_pred --H-HHcCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCcceEEEECCC-----------------hhHhHhhhcCcCEE
Confidence 1 235699999999999999999999999999999999999999987 34444444568899
Q ss_pred EECCEEEE
Q psy6858 456 IVGGRVCV 463 (592)
Q Consensus 456 iv~GkvV~ 463 (592)
|++||||.
T Consensus 394 i~~G~vvk 401 (403)
T 3mtw_A 394 MKGGAVVK 401 (403)
T ss_dssp EETTEEEE
T ss_pred EECCEEEe
Confidence 99999763
No 63
>3mkv_A Putative amidohydrolase; sargasso SEA, structural genomics, protein structure initiat NEW YORK structural genomix research consortium, nysgxrc; HET: KCX; 2.40A {Undefined}
Probab=99.95 E-value=1.3e-27 Score=248.90 Aligned_cols=66 Identities=30% Similarity=0.579 Sum_probs=58.6
Q ss_pred cccEEEEccEEEcCCC--c-eeeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccc
Q psy6858 18 QNRLLIKNGKVVNADK--I-SDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELE 83 (592)
Q Consensus 18 ~~~llIkng~Iv~~d~--~-~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~ 83 (592)
|.+++||||+|+|++. . ..+||+|+||||++||++...+.++++||++|++|+|||||+|+|+...
T Consensus 3 M~~lli~ng~i~d~~~~~~~~~~dV~I~~G~I~~Ig~~~~~~~~~~vID~~G~~v~PGfID~H~H~~~~ 71 (426)
T 3mkv_A 3 LTTFLFRNGALLDPDHPDLLQGFEILIEDGFIREVSDKPIKSSNAHVIDVKGKTIMPGLIDLHVHVVAI 71 (426)
T ss_dssp CCEEEEEEEEECCTTSSSCEEEEEEEEETTEEEEEESSCCCCSSCEEEECTTCEEEECEEEEEECTTCC
T ss_pred cCcEEEECeEEEeCCCCcEecCcEEEEECCEEEEecCCCCCCCCCEEEECCCCEEEeChhhhhhCcccc
Confidence 6789999999999763 2 3689999999999999987777788999999999999999999998543
No 64
>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10
Probab=99.95 E-value=3.7e-27 Score=249.39 Aligned_cols=323 Identities=17% Similarity=0.084 Sum_probs=186.9
Q ss_pred CceeeEEEEECCEEEEeecCCCCCCCCeEEecCCCEEeeCccccCcCcccccCCCCChhhHHHHHHHHHcCCeeEEeccc
Q psy6858 33 KISDLDIYIENGVIQQLGRNLIVPGGVRVIDAAGSYVIPGGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFA 112 (592)
Q Consensus 33 ~~~~~dV~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~~~~~~d~~~~~~~~ala~GtTti~d~~ 112 (592)
+..+++|+|+||+|++|++ . + || +|++|+|||||+|+|+.++..- .. .++...+++++++||||++|+.
T Consensus 26 ~~~~~~V~I~~g~I~~vg~------~-~-iD-~g~~v~PGlID~H~H~~~~~~~-~~-~~l~~~~~~~l~~GvTtv~d~~ 94 (376)
T 1o12_A 26 GEFTGDVEIEEGKIVKVEK------R-E-CI-PRGVLMPGFVDPHIHGVVGADT-MN-CDFSEMEEFLYSQGVTTFLATT 94 (376)
T ss_dssp EEEEEEEEEETTEEEEEEE------C-C-SC-CSSEEEECEEEEEECEETTEET-TT-TCHHHHHHHHHTTTEEEEEEEC
T ss_pred cccCceEEEECCEEEEeCC------C-c-cC-CCCEEccCeEEEeecCCCCCCC-Ch-hhHHHHHHHHHhCCcEEEEecc
Confidence 3468999999999999996 1 5 99 9999999999999999765421 11 2477889999999999999987
Q ss_pred cCCCCccHHHHHHHHHHHhcc-CceeeeeccccccCCChHHHHHHHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHH
Q psy6858 113 LPRKGESLIKTYESWRQKADE-KVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSA 191 (592)
Q Consensus 113 ~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~ 191 (592)
...+.+...+.++.+++.... .....+++|...+.+.+.. .|... .......+.+ .
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~g~~i~g~~~~g~~~~~~~----------~g~~~------~~~~~~~~~~-------~ 151 (376)
T 1o12_A 95 VSTSLEKMKEILRKARDYILENPSTSLLGVHLEGPYISKEK----------KGAHS------EKHIRPPSER-------E 151 (376)
T ss_dssp CSCCHHHHHHHHHHHHHHHHHCTTCSEEEEEEECSSSCGGG----------CTTSC------TTTCCCCCHH-------H
T ss_pred CCCCHHHHHHHHHHHHHHhhccCCCceEEEEEEcCcCCccc----------CCCCC------HHHhcCCCHH-------H
Confidence 554433443444444433332 1122344554433332210 11100 0000111111 1
Q ss_pred HHHc-CC--eEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHH
Q psy6858 192 IKNL-GA--IAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAM 268 (592)
Q Consensus 192 a~~~-g~--~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i 268 (592)
.+++ +. .+.++++. + .. +.+.++++.|+++++.|+. +..+.+
T Consensus 152 ~~~~~~~~~~~~~~pe~--------------------------~------~~-~~i~~A~~~g~~v~igH~~--~~~~~i 196 (376)
T 1o12_A 152 LSEIDSPAKMLTFAPEI--------------------------E------SS-ELLLRLVKRDIVLSAGHSI--ATFEEF 196 (376)
T ss_dssp HTTCCTTEEEEEECTTS--------------------------T------TG-GGGGGGGGGTCEEEECSBC--CCHHHH
T ss_pred HHHhhCCeEEEEEccCC--------------------------c------cH-HHHHHHHHCCCEEEeecCc--cCHHHH
Confidence 1111 11 12222111 0 00 3566788888988888853 334556
Q ss_pred HHHHHHHHhcCCceeee-----eecccceee-------cCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhc-CC-
Q psy6858 269 AYKRKELMKKGKHCTLY-----GETLAAAVG-------THANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNE-NA- 334 (592)
Q Consensus 269 ~~ar~~~~~~G~~~~v~-----~e~~~~~l~-------~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~-G~- 334 (592)
+.+++. |. ... ++...+++. ++.... +.. ... -... -++..+..+++. |.
T Consensus 197 ~~a~~~----G~--~~itH~~~~~~~~~~~~~g~~~~~l~~~~~---~~~---~~~-~~~~---~~p~~~~~~~~~~g~~ 260 (376)
T 1o12_A 197 MKFYKE----GV--KRITHFPNGLKPLHHREIGITGAGLLLDDV---KLE---LIC-DGVH---LSREMVKLVYKVKKAN 260 (376)
T ss_dssp HHHHTT----TC--CEESSTTTTBCCCCSSCCHHHHHHHHCTTC---EEE---EEC-SSSS---SCHHHHHHHHHHHTGG
T ss_pred HHHHHC----CC--CeEEecccCcCChhhcccchhhhhhcCCcc---eEE---EeC-CCcC---cCHHHHHHHHhhCCCC
Confidence 666666 76 321 333333221 000000 000 000 0011 122333344454 44
Q ss_pred ceEEeCCCCCCCh----hhhhcC------CCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCC
Q psy6858 335 LQTTGSDNCTFNK----NQKELG------KDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLY 404 (592)
Q Consensus 335 ~~~~gsD~~~~~~----~~~~~g------~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~ 404 (592)
..++.||...... .....| .+.+...+.+..|.+..|...++.++...++++.++++++|.|||++||++
T Consensus 261 ~~~~~sd~~~~~g~~~g~~~~~g~~~~~~~g~~~~~~g~~~g~~~~l~~~l~~~~~~~~~~~~~~l~~~T~~~A~~lgl~ 340 (376)
T 1o12_A 261 GIVLVTDSISAAGLKDGTTTLGDLVVKVKDGVPRLEDGTLAGSTLFFSQAVKNFRKFTGCSITELAKVSSYNSCVELGLD 340 (376)
T ss_dssp GEEEECCBCTTTTSCSCEEESSSSEEEEETTEEECTTSCBCCBCCCHHHHHHHHHHHHCCCHHHHHHHHTHHHHHHTTCT
T ss_pred CEEEecCchhhcCCCCeeEEECCeEEEEeCCeEEeCCCcccccccCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCC
Confidence 6888898753211 000000 012333455566777777777777776678999999999999999999996
Q ss_pred CCCccccCCCCccEEEEeCCceEEecCCcccccCCCCcccCeEEeeeeeEEEECCEEEEECC
Q psy6858 405 PKKGVIAEGSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHGVPEYVIVGGRVCVDEG 466 (592)
Q Consensus 405 ~~~G~I~~G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g~~~~Viv~GkvV~~~g 466 (592)
+ +|+|++|++|||||||++ +.|..||++|++||++|
T Consensus 341 ~-~G~i~~G~~ADlv~~d~~-------------------------~~v~~v~~~G~~v~~~~ 376 (376)
T 1o12_A 341 D-RGRIAEGTRADLVLLDED-------------------------LNVVMTIKEGEVVFRSR 376 (376)
T ss_dssp T-SSCCSTTSBCCEEEECTT-------------------------CCEEEEEETTEEEEEC-
T ss_pred C-CccCCCCCcCCEEEECCC-------------------------CCEEEEEECCEEEeecC
Confidence 5 499999999999999986 25789999999999885
No 65
>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X*
Probab=99.94 E-value=7.1e-27 Score=257.21 Aligned_cols=327 Identities=16% Similarity=0.139 Sum_probs=201.5
Q ss_pred ccEEEEccEEEcCCCc--eeeEEEEECCEEEEeecCCCC-----CCCCeEEecCCCEEeeCccccCcCcccccC------
Q psy6858 19 NRLLIKNGKVVNADKI--SDLDIYIENGVIQQLGRNLIV-----PGGVRVIDAAGSYVIPGGIDPHTHFELELM------ 85 (592)
Q Consensus 19 ~~llIkng~Iv~~d~~--~~~dV~I~dG~I~~Ig~~~~~-----~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~------ 85 (592)
|.++|+||+|++++.. ...+|+|+||+|++||+..+. +.+.++||++|++|+|||||+|+|+..+..
T Consensus 36 m~~li~ng~I~t~~~~~~~~~~v~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~G~~v~PGfiD~H~H~~~~g~~~~~~d 115 (534)
T 3icj_A 36 CMKALINGTIYTSFSPVKKVSGLVISNERVLYAGDSSTALRIAELAGGEIIDLKGKFVMPAFFDSHLHLDELGMSLEMVD 115 (534)
T ss_dssp CEEEEESSEEEEEETTEEEESEEEEETTEEEEEECHHHHHHHHHHHTCEEEECTTCEEEECEEEEEECHHHHHHHHHSEE
T ss_pred CCEEEECCEEECCCCCCceeeEEEEECCEEEEEcChHHHHhhccCCCCEEEECCCCEEecCEeehhhhhhhhhhhcCccC
Confidence 3489999999997655 468999999999999986442 346799999999999999999999732100
Q ss_pred --CC----------------------------------------------------------------------------
Q psy6858 86 --GA---------------------------------------------------------------------------- 87 (592)
Q Consensus 86 --~~---------------------------------------------------------------------------- 87 (592)
+.
T Consensus 116 l~~~~s~~e~~~~l~~~~~~wi~g~G~~~~~~~~~pt~~~LD~~~~Pv~l~~~~~H~~~~Ns~AL~~~gi~~t~~p~G~t 195 (534)
T 3icj_A 116 LRGVKSMEELVERVKKGRGRIIFGFGWDQDELGRWPTREDLDVIDRPVFLYRRCFHVAVMNSKMIDLLNLKPSKDFDEST 195 (534)
T ss_dssp CTTCCSHHHHHHHHHTCCSSSEEEEEECHHHHSSCCCHHHHTTSSSCEEEEETTSSEEEECHHHHHHHCCCCCTTEETTT
T ss_pred CCCCCCHHHHHHHHHHHHhhCEEEcccCHHHhcCCCCHHHHhhCCCeEEEEecCCcHhHHhHHHHHHcCCCCCCCCCCCC
Confidence 00
Q ss_pred ------------------C-ChhhH----HHHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeecccc
Q psy6858 88 ------------------T-SVDDF----YHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVG 144 (592)
Q Consensus 88 ------------------~-~~d~~----~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 144 (592)
. +.++. ..+.+.+++.|+|++.|+... ....+++.+.........++...+.
T Consensus 196 G~l~e~A~~~v~~~~p~~~l~~~~~~~~l~~a~~~~~~~GiTsv~d~~~~---~~~~~~~~~l~~~g~l~~rv~~~~~-- 270 (534)
T 3icj_A 196 GIVRERALEESRKIINEKILTVKDYKHYIESAQEHLLSLGVHSVGFMSVG---EKALKALFELEREGRLKMNVFAYLS-- 270 (534)
T ss_dssp TEEEHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTTEEEEEEEEEC---HHHHHHHHHHHHTTCCCSEEEEEEC--
T ss_pred ceeeHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhCCCEEEEeCCCC---HHHHHHHHHHHhCCCCcEEEEEecC--
Confidence 1 22222 234455678999999998543 3455666666555443333322221
Q ss_pred ccCCChHHHHHHHHHHH-H-----cCCcEEEEEEe-------------e------CCCcCCCHHHHHHHHHHHHHcCCeE
Q psy6858 145 ITWWSDQVQQEMAELCE-K-----HGVNSFKTFMA-------------Y------KGLYMLSDGELYDAFSAIKNLGAIA 199 (592)
Q Consensus 145 ~~~~~~~~~~~~~~lv~-~-----~Gv~~~k~~~~-------------~------~~~~~~~~~~l~~~~~~a~~~g~~~ 199 (592)
. +..+++.+... . ..+..+|+|.. | .+...+++++|.++++.|++.|..+
T Consensus 271 ~-----~~~~~~~~~~~~~~~~~~~~~~gvK~~~DG~~~~~tA~l~~pY~d~~~~~g~~~~~~e~l~~~v~~A~~~G~~v 345 (534)
T 3icj_A 271 P-----ELLDKLEELNLGKFEGRRLRIWGVKLFVDGSLGARTALLSEPYTDNPTTSGELVMNKDEIVEVIERAKPLGLDV 345 (534)
T ss_dssp G-----GGHHHHHHHTCCSEECSSEEEEEEEEESCCCTTTTCSCCSSCBTTBTTCCCCCSSCHHHHHHHHHHHTTTTCEE
T ss_pred H-----HHHHHHHHhccccCCCCcEEEEeEEEEEeCCCCccchhhcCCccCCCCCCCcccCCHHHHHHHHHHHHHCCCEE
Confidence 1 22333333210 0 11345676643 1 2334578999999999999999999
Q ss_pred EEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcC
Q psy6858 200 MVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKG 279 (592)
Q Consensus 200 ~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G 279 (592)
.+|+.....+. .++....+.+.+..+.|+..-. .+.++++++. |
T Consensus 346 ~~Ha~gd~ai~-------------------------------~~l~a~~~~~~r~~ieH~~~~~-~e~i~~la~~----g 389 (534)
T 3icj_A 346 AVHAIGDKAVD-------------------------------VALDAFEEAEFSGRIEHASLVR-DDQLERIKEL----K 389 (534)
T ss_dssp EEEECSHHHHH-------------------------------HHHHHHHHHTCCCEEEECCBCC-HHHHHHHHHH----T
T ss_pred EEEEcChHHHH-------------------------------HHHHHHHhccCCCEEEECCCCC-HHHHHHHHHc----C
Confidence 99997643222 2222222222567788877433 3445666666 7
Q ss_pred CceeeeeecccceeecCCCCCCCc-ccccccceecCCCCCCCCCHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCC
Q psy6858 280 KHCTLYGETLAAAVGTHANQIPCT-WHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFT 358 (592)
Q Consensus 280 ~~~~v~~e~~~~~l~~d~~~~~~~-~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~ 358 (592)
+ .+. +++.+...+. +... +.. ......+| +..+++. +.+++|||....+.. .|.
T Consensus 390 v--~~~--~~P~~~~~~~--~~~~~lg~-~r~~~~~p----------~~~l~~~-v~valGSD~p~~~~~-------p~~ 444 (534)
T 3icj_A 390 V--RIS--AQPHFIVSDW--WIVNRVGE-ERAKWAYR----------LKTLSSI-TKLGFSTDSPIEPAD-------PWV 444 (534)
T ss_dssp C--EEE--ECTTHHHHCT--THHHHHHH-HHGGGBTC----------HHHHHHH-SCEEECCTTTTSCCC-------HHH
T ss_pred C--eEE--Eccccccchh--HHHHhhCH-HHHhccHH----------HHHHHHh-CCEEeecCCCCCCCC-------HHH
Confidence 7 432 2333332222 1111 110 00011123 3468889 999999998532211 000
Q ss_pred cCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEEEEeCCce
Q psy6858 359 HIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIVVWNYKAK 426 (592)
Q Consensus 359 ~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlVv~d~~~~ 426 (592)
+.+..+.........++++.++|+++|.|+|+++|++ ++|+|++||.|||||||.|..
T Consensus 445 ---------~~~~av~r~~~~~~~~ls~~eaL~~~T~~~A~~lg~e-~~GsLe~Gk~ADlvvld~dpl 502 (534)
T 3icj_A 445 ---------SIDAAVNRYVVDPGERVSREEALHLYTHGSAQVTLAE-DLGKLERGFRAEYIILDRDPL 502 (534)
T ss_dssp ---------HHHHHHHCCSSCGGGCCCHHHHHHHTTHHHHHHTTCT-TCSCCSTTSBCCEEEESSCTT
T ss_pred ---------HHHHHHhccccCcccCCCHHHHHHHHHHHHHHHhCCC-CCeEECCCCCcCEEEECCChh
Confidence 1111110001223467999999999999999999998 999999999999999998843
No 66
>3ggm_A Uncharacterized protein BT9727_2919; bacillus cereus group., structural genomics, PSI-2, protein structure initiative; 2.00A {Bacillus thuringiensis serovarkonkukian}
Probab=99.50 E-value=3.9e-14 Score=115.29 Aligned_cols=68 Identities=26% Similarity=0.369 Sum_probs=57.7
Q ss_pred cccEEEEccEEEcCCC--ceeeEEEEECCEEEEeecCCCC---CCCCeEEecCCCEEeeCccccCcCcccccC
Q psy6858 18 QNRLLIKNGKVVNADK--ISDLDIYIENGVIQQLGRNLIV---PGGVRVIDAAGSYVIPGGIDPHTHFELELM 85 (592)
Q Consensus 18 ~~~llIkng~Iv~~d~--~~~~dV~I~dG~I~~Ig~~~~~---~~~~~vIDa~G~~V~PG~ID~HtH~~~~~~ 85 (592)
+++++|+|++|++++. ...++|+|+||+|++|++.... +.+.++||++|++|+|||||+|+|+..|..
T Consensus 3 ~~~~li~n~~i~~~~~~~~~~~~i~I~~g~I~~ig~~~~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~p~~ 75 (81)
T 3ggm_A 3 VPDMILYNGKITTLDPSQPEVSAIAITDGLITAVGGDELLNSATEKTKKIDLKRKRAIPGLNDSHIHVIRGLE 75 (81)
T ss_dssp CCSEEEESSEEECSCTTCSEESEEEEETTEEEEEESGGGGGGCCTTCEEEECTTCEEEECCCCTTEEEECCCC
T ss_pred cCCEEEECCEEEeCCCCCccccEEEEECCEEEEEeCchHhcccCCCCEEEECCCCEEeeCeEeeeeCCCCccc
Confidence 5789999999999764 3578999999999999985432 346789999999999999999999987754
No 67
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=99.07 E-value=2.2e-09 Score=108.32 Aligned_cols=255 Identities=15% Similarity=0.062 Sum_probs=132.1
Q ss_pred CccccCcCcccccC--------CCCChhhHHHHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeec--
Q psy6858 72 GGIDPHTHFELELM--------GATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYAL-- 141 (592)
Q Consensus 72 G~ID~HtH~~~~~~--------~~~~~d~~~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~-- 141 (592)
|+||+|+|+..+.. .....+......+.+.++|+|++++......+.+. +.+.+..+.......+..++
T Consensus 6 G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~iv~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~G~~~ 84 (291)
T 1bf6_A 6 GYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMGRNA-QFMLDVMRETGINVVACTGYYQ 84 (291)
T ss_dssp SEEEEEECSSEECHHHHTCGGGEECCHHHHHHHHHHHHHTTEEEEEECCCGGGTCCH-HHHHHHHHHHCCEEEEEECCCC
T ss_pred ceeeeccCeecCCcccccCCCcccCCHHHHHHHHHHHHHcCCCEEEecCCCcCCCCH-HHHHHHHHhcCCeEEEeecccc
Confidence 89999999964321 11223344556677788999999987642222233 22333222222123334444
Q ss_pred ---cccc-cCCChH-HHHHHHHHHHHcCC-----c--EEE-EEEeeCCCcCCCH---HHHHHHHHHHHHcCCeEEEecCc
Q psy6858 142 ---HVGI-TWWSDQ-VQQEMAELCEKHGV-----N--SFK-TFMAYKGLYMLSD---GELYDAFSAIKNLGAIAMVHAEN 205 (592)
Q Consensus 142 ---~~~~-~~~~~~-~~~~~~~lv~~~Gv-----~--~~k-~~~~~~~~~~~~~---~~l~~~~~~a~~~g~~~~vHae~ 205 (592)
|... .....+ ..+.+.+.+. .|+ . .++ +.+.+. ..++ +.|.+.++.|+++|+++.+|+++
T Consensus 85 ~~~hP~~~~~~~~~~l~~~~~~~l~-~gi~~~~~~~~~iGe~gld~~---~~~~~~~~~~~~~~~~a~~~~~pv~iH~~~ 160 (291)
T 1bf6_A 85 DAFFPEHVATRSVQELAQEMVDEIE-QGIDGTELKAGIIAEIGTSEG---KITPLEEKVFIAAALAHNQTGRPISTHTSF 160 (291)
T ss_dssp GGGCCTHHHHSCHHHHHHHHHHHHH-TCSTTSSCCEEEEEEEECBTT---BCCHHHHHHHHHHHHHHHHHCCCEEEECGG
T ss_pred CccCcHhhhcCCHHHHHHHHHHHHH-hccCCcCcceeeEEEEecCCC---CCCHHHHHHHHHHHHHHHHHCCeEEEeCCC
Confidence 2210 011111 1223333332 242 2 221 112221 2333 34778999999999999999864
Q ss_pred hhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccC---CCEEEEecccHHHHHHHHHHHHHHHhcCCce
Q psy6858 206 GEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVD---CPLYVVHIMSKAAGDAMAYKRKELMKKGKHC 282 (592)
Q Consensus 206 ~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~---~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~ 282 (592)
.... . +.+.++++.+ .++.+.|+......+.+..+.+. |.
T Consensus 161 ~~~~----------------------------~---~~~~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~----G~-- 203 (291)
T 1bf6_A 161 STMG----------------------------L---EQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDL----GA-- 203 (291)
T ss_dssp GCSH----------------------------H---HHHHHHHHTTCCGGGEEECCCCSSCCHHHHHHHHHT----TC--
T ss_pred CCCh----------------------------H---HHHHHHHHcCCCchhEEEECCCCCCCHHHHHHHHHC----CC--
Confidence 2100 0 1233334434 46788898543334555555555 77
Q ss_pred eeeeecccceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcC--CceEEeCCCCCCChhhhhcCCCCCCcC
Q psy6858 283 TLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNEN--ALQTTGSDNCTFNKNQKELGKDSFTHI 360 (592)
Q Consensus 283 ~v~~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G--~~~~~gsD~~~~~~~~~~~g~~~f~~~ 360 (592)
.+..+.+ ... ..+|. ....+.++++++.+ ..++++||..... .....
T Consensus 204 ~i~~~~~---------~~~----------~~~~~---~~~~~~~~~~~~~~~~dril~~TD~p~~~-~~~~~-------- 252 (291)
T 1bf6_A 204 YVQFDTI---------GKN----------SYYPD---EKRIAMLHALRDRGLLNRVMLSMDITRRS-HLKAN-------- 252 (291)
T ss_dssp EEEECCT---------TCT----------TTSCH---HHHHHHHHHHHHTTCGGGEEECCCCCSGG-GSGGG--------
T ss_pred EEEEccC---------ccc----------CCCCH---HHHHHHHHHHHHhCCCCeEEEcCCCCCCc-cchhc--------
Confidence 4432211 000 00110 11345678888888 4678999985421 11111
Q ss_pred CCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcC
Q psy6858 361 PNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFN 402 (592)
Q Consensus 361 p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lg 402 (592)
.| ++....+..+++.+ ...+++++++.++++.||+++||
T Consensus 253 -~~-~~~~~~~~~~~~~l-~~~g~~~~~~~~~~~~N~~rl~~ 291 (291)
T 1bf6_A 253 -GG-YGYDYLLTTFIPQL-RQSGFSQADVDVMLRENPSQFFQ 291 (291)
T ss_dssp -TS-CCTTHHHHTHHHHH-HHTTCCHHHHHHHHTHHHHHHCC
T ss_pred -CC-CCHHHHHHHHHHHH-HHcCCCHHHHHHHHHHhHHHHhC
Confidence 12 33344344444444 33468999999999999999986
No 68
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=98.91 E-value=3.7e-08 Score=101.62 Aligned_cols=128 Identities=19% Similarity=0.072 Sum_probs=68.5
Q ss_pred CccccCcCcccccCCC--CCh------hhHHH----HHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeee
Q psy6858 72 GGIDPHTHFELELMGA--TSV------DDFYH----GTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDY 139 (592)
Q Consensus 72 G~ID~HtH~~~~~~~~--~~~------d~~~~----~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 139 (592)
|+||+|+|+...+... ..+ ++... ....+.+.|+|++++......+.+.....+ ..+......++..
T Consensus 16 GliD~H~HL~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~aGV~~iv~~~~~~~~~~~~~~~~-la~~~~~~i~~~~ 94 (330)
T 2ob3_A 16 GFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAE-VSRAADVHIVAAT 94 (330)
T ss_dssp CSEEEEECSEECCTTHHHHCGGGGSCHHHHHHHHHHHHHHHHHTTCCEEEECCCGGGTCCHHHHHH-HHHHHTCEEECEE
T ss_pred CCceeeeCeecCCchhccCCCchhhhccCHHHHHHHHHHHHHHcCCCEEEeCCCCCcCCCHHHHHH-HHHHhCCcEEEEe
Confidence 8999999996532110 011 23322 256678899999988753222233333333 2222222355667
Q ss_pred ecccccc----CCChHHH-HHHHHHHHH----c--CCcEEEEEEeeCCCcCCCHHH---HHHHHHHHHHcCCeEEEecC
Q psy6858 140 ALHVGIT----WWSDQVQ-QEMAELCEK----H--GVNSFKTFMAYKGLYMLSDGE---LYDAFSAIKNLGAIAMVHAE 204 (592)
Q Consensus 140 ~~~~~~~----~~~~~~~-~~~~~lv~~----~--Gv~~~k~~~~~~~~~~~~~~~---l~~~~~~a~~~g~~~~vHae 204 (592)
|+|...+ .+..+.. +.+.+.+.. . .+..+++.+. +..++.+ |.+.++.|+++|+++++|..
T Consensus 95 G~hp~~p~~~~~~~~~~l~~~l~~~~~~gi~~~~~k~~aiEiGld----~~~~~~q~~~f~~q~~lA~~~glPv~iH~~ 169 (330)
T 2ob3_A 95 GLWFDPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIKVATT----GKATPFQELVLKAAARASLATGVPVTTHTA 169 (330)
T ss_dssp ECCSCCCHHHHTCCHHHHHHHHHHHHHTCSTTSCCCCSEEEEECS----SSCCHHHHHHHHHHHHHHHHHCCCEEEECC
T ss_pred cCCcCCCchhccCCHHHHHHHHHHHHHhhccccccceeEEEEeCC----CCCCHHHHHHHHHHHHHHHHhCCeEEEECC
Confidence 8884111 1222222 223333211 1 2334454443 2345555 77889999999999999985
No 69
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=98.75 E-value=7.2e-08 Score=98.43 Aligned_cols=129 Identities=18% Similarity=0.208 Sum_probs=68.6
Q ss_pred CccccCcCcccccCCC--CCh------hhHHHH---HHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeee
Q psy6858 72 GGIDPHTHFELELMGA--TSV------DDFYHG---TKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYA 140 (592)
Q Consensus 72 G~ID~HtH~~~~~~~~--~~~------d~~~~~---~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 140 (592)
|+||+|+|+...+... ..+ ++.... ...+.+.|+|++++......+.+. +.+.+..........+..|
T Consensus 17 G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gv~~iv~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~G 95 (314)
T 2vc7_A 17 GFTLIHEHLRVFSEAVRQQWPHLYNEDEEFRNAVNEVKRAMQFGVKTIVDPTVMGLGRDI-RFMEKVVKATGINLVAGTG 95 (314)
T ss_dssp CSEESSCBSCBCCHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTTCCEEEECCCBTTTCCH-HHHHHHHHHHCCEEEECEE
T ss_pred CCcccccccccCcchhcccCcchhhhcccHHHHHHHHHHHHHcCCCEEEecCCCCCCcCH-HHHHHHHHHcCCeEEEEee
Confidence 8999999996532110 001 222222 356778999999887643223232 2222222222223556677
Q ss_pred ccccc--cCCC-hHHHHHHHHHHHH---cCCc-------EEEEEEeeCCCcCCCHH---HHHHHHHHHHHcCCeEEEecC
Q psy6858 141 LHVGI--TWWS-DQVQQEMAELCEK---HGVN-------SFKTFMAYKGLYMLSDG---ELYDAFSAIKNLGAIAMVHAE 204 (592)
Q Consensus 141 ~~~~~--~~~~-~~~~~~~~~lv~~---~Gv~-------~~k~~~~~~~~~~~~~~---~l~~~~~~a~~~g~~~~vHae 204 (592)
+|... ..+. +...+++.++++. .|+. .+++.+++.. .++. .|.+.++.|+++|+++.+|+.
T Consensus 96 ~hp~~~~~~~~~~~~~~~l~~~~~~~~~~gige~G~~~g~i~~~ld~~~---~~~~q~~~~~~~~~lA~~~~~pv~iH~~ 172 (314)
T 2vc7_A 96 IYIYIDLPFYFLNRSIDEIADLFIHDIKEGIQGTLNKAGFVKIAADEPG---ITKDVEKVIRAAAIANKETKVPIITHSN 172 (314)
T ss_dssp BCCSSCCCGGGTTCCHHHHHHHHHHHHHTCSSSSSCCCCSEEEECCTTC---SCHHHHHHHHHHHHHHHHHCCCEEEECC
T ss_pred cCCCCCCchhhhccCHHHHHHHHHHHHHhhcccCCCCCCeEEEeecCCC---CCHHHHHHHHHHHHHHHHHCCEEEEeCC
Confidence 77632 2221 1224455554431 2321 1233344432 3343 366788899999999999985
No 70
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=98.73 E-value=1.5e-06 Score=86.07 Aligned_cols=125 Identities=18% Similarity=0.180 Sum_probs=73.4
Q ss_pred ccccCcCcccccCCCCChhhHHHHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccc-cCCChH
Q psy6858 73 GIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGI-TWWSDQ 151 (592)
Q Consensus 73 ~ID~HtH~~~~~~~~~~~d~~~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 151 (592)
+||+|+|+...... .+.......+.+.||++++.... ...+.....+.. .... ...+..|+|... ..+.+.
T Consensus 5 ~iD~H~Hl~~~~~~----~~~~~~l~~~~~~Gv~~~v~~~~--~~~~~~~~~~l~-~~~~-~~~~~~G~hP~~~~~~~~~ 76 (259)
T 1zzm_A 5 FIDTHCHFDFPPFS----GDEEASLQRAAQAGVGKIIVPAT--EAENFARVLALA-ENYQ-PLYAALGLHPGMLEKHSDV 76 (259)
T ss_dssp EEESCBCTTSTTTT----TCHHHHHHHHHHTTEEEEEEECC--SGGGHHHHHHHH-HHCT-TEEEEECCCGGGGGGCCHH
T ss_pred EEEeeecCCchhhc----cCHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHH-HhCC-CeEEEEEecccccccCCHH
Confidence 89999999764321 23444466778899999876532 222333333322 2222 345566776532 234455
Q ss_pred HHHHHHHHHHH--cCCcEEE-EEEeeCCCc---CCCHHHHHHHHHHHHHcCCeEEEecCc
Q psy6858 152 VQQEMAELCEK--HGVNSFK-TFMAYKGLY---MLSDGELYDAFSAIKNLGAIAMVHAEN 205 (592)
Q Consensus 152 ~~~~~~~lv~~--~Gv~~~k-~~~~~~~~~---~~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (592)
..+++++++.. .++..+. +.+.++... ....+.|...++.|+++|+++.+|+..
T Consensus 77 ~~~~l~~~~~~~~~~~~~iGEiGld~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~~~ 136 (259)
T 1zzm_A 77 SLEQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRR 136 (259)
T ss_dssp HHHHHHHHHHHCCSSEEEEEEEEEECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred HHHHHHHHHhcCCCCEEEEEEeccCCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEecc
Confidence 67788887765 3333332 233332111 112345888899999999999999865
No 71
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=98.65 E-value=1.5e-06 Score=87.59 Aligned_cols=127 Identities=13% Similarity=0.121 Sum_probs=78.4
Q ss_pred ccccCcCcccccCCCCChhhHHHHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhc--cCceeeeeccccc-cCCC
Q psy6858 73 GIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKAD--EKVCCDYALHVGI-TWWS 149 (592)
Q Consensus 73 ~ID~HtH~~~~~~~~~~~d~~~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~--~~~~~~~~~~~~~-~~~~ 149 (592)
+||+|+|+..+.+. ++...-...|.+.||..++... ....+...+++....... ....+.+|+|... ..+.
T Consensus 3 ~iD~H~HL~~~~~~----~d~~~vl~~a~~~gV~~~v~~g--~~~~~~~~~~~la~~~~~~~~~v~~~~GiHP~~~~~~~ 76 (287)
T 3rcm_A 3 LIDIGVNLTNSSFH----DQQAAIVERALEAGVTQMLLTG--TSLAVSEQALELCQQLDASGAHLFATAGVHPHDAKAWD 76 (287)
T ss_dssp EEEEEECTTCGGGT----TCHHHHHHHHHHTTEEEEEECC--CSHHHHHHHHHHHHHHCTTSSSEEEEECCCGGGGGGCC
T ss_pred eEEEeecCCchhcc----cCHHHHHHHHHHcCCeEEEEec--CCHHHHHHHHHHHHhCCCCCceEEEEEEECcCccccCC
Confidence 89999999765332 3455557778889999886442 212223333333333321 1256778888643 3445
Q ss_pred hHHHHHHHHHHHHcCCcEEE-EEEeeCCCcC---CCHHHHHHHHHHHHHcCCeEEEecCc
Q psy6858 150 DQVQQEMAELCEKHGVNSFK-TFMAYKGLYM---LSDGELYDAFSAIKNLGAIAMVHAEN 205 (592)
Q Consensus 150 ~~~~~~~~~lv~~~Gv~~~k-~~~~~~~~~~---~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (592)
++..++++++++...+..+. +.+.|..... ...+.|.+.++.|++++.++.+|+.+
T Consensus 77 ~~~~~~l~~l~~~~~vvaIGEiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~~lPv~iH~r~ 136 (287)
T 3rcm_A 77 TDSERQLRLLLSEPRVRAVGECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHERD 136 (287)
T ss_dssp TTHHHHHHHHHTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEES
T ss_pred HHHHHHHHHHhcCCCeEEEEEeeeCCCcccCcHHHHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 56778888887654555554 3345432211 12345888899999999999999875
No 72
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=98.54 E-value=3.7e-06 Score=87.30 Aligned_cols=278 Identities=16% Similarity=0.130 Sum_probs=147.5
Q ss_pred CccccCcCcccccC---------CCCChhhHHHHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHh---ccCceeee
Q psy6858 72 GGIDPHTHFELELM---------GATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKA---DEKVCCDY 139 (592)
Q Consensus 72 G~ID~HtH~~~~~~---------~~~~~d~~~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~---~~~~~~~~ 139 (592)
|+..+|=|+...+. .....+......+.+.+.|++|++|.-....|-+. ..+.+..+.. .....+.-
T Consensus 21 G~tl~HEHl~~~~~~~~~~~~~~~l~d~~~~~~el~~~~~~G~~tiVd~t~~~~GRd~-~~l~~is~~t~~~Gv~Iv~~T 99 (363)
T 3ovg_A 21 GITDCHDHFIKNGGPEVEEHIDFLMLNVDASIKEFKEFIDRGGSTIVTMDPPNVGRDV-LKTLEIANAVKNLGGNVIMST 99 (363)
T ss_dssp CEEEEEECSCBCSSHHHHHCGGGCBCCHHHHHHHHHHHHHTTEEEEEECCCTTTTCCH-HHHHHHHHHHGGGTCEEEEEE
T ss_pred CCceeccceeccCChhhccCCcccccCHHHHHHHHHHHHHhCCCeEEEeCCCccCCCH-HHHHHHHHhcccCCcEEEEeC
Confidence 78889999854322 11123333344455667999999998655455343 3444444433 23455666
Q ss_pred eccccc-----cCCChH-HHHHHHHHH-HH--cCC-----------------cEEEEEEeeCCCcCCCHHHHHHHHHHHH
Q psy6858 140 ALHVGI-----TWWSDQ-VQQEMAELC-EK--HGV-----------------NSFKTFMAYKGLYMLSDGELYDAFSAIK 193 (592)
Q Consensus 140 ~~~~~~-----~~~~~~-~~~~~~~lv-~~--~Gv-----------------~~~k~~~~~~~~~~~~~~~l~~~~~~a~ 193 (592)
|++... +.|... ..+++.+++ ++ .|+ .-+++..++.........-|.+.++.|+
T Consensus 100 G~y~~~~~~~~~~~~~~~~~e~l~~~~~~ei~~Gi~~~~~~gp~~~~t~ikaG~ikig~s~~~~t~~Q~~~f~aq~~~A~ 179 (363)
T 3ovg_A 100 GFHKAKFYDKYSSWLAVVPTEEIVKMCVAEIEEGMDEYNYNGPVVKRSKAKAGIIKAGTGYGAIDRLELKALEVAARTSI 179 (363)
T ss_dssp ECCCGGGSCTTTSHHHHSCHHHHHHHHHHHHHTCCBTTTTSSSCCCBCSCCCCEEEEEEEETBEEHHHHHHHHHHHHHHH
T ss_pred CCCcCcccccCcHhhhcCCHHHHHHHHHHHHHhcccccccccccccCCCccCCEEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 665532 122111 123444332 11 233 2346666654222222234788889999
Q ss_pred HcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCC---EEEEecccHHHHHHHHH
Q psy6858 194 NLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCP---LYVVHIMSKAAGDAMAY 270 (592)
Q Consensus 194 ~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~p---l~i~hv~s~~a~~~i~~ 270 (592)
++|+++.+|...+.... ..+++.++.+.+ +.+.|+.+....+....
T Consensus 180 e~glPViiH~r~gr~a~-------------------------------d~l~iL~e~g~~~~~vvi~H~~~~~~~~~a~~ 228 (363)
T 3ovg_A 180 LTGCPILVHTQLGTMAL-------------------------------EVAKHLIGFGANPDKIQISHLNKNPDKYYYEK 228 (363)
T ss_dssp HHCCCEEEEEETTCSHH-------------------------------HHHHHHHHHTCCGGGEEEECGGGSCCHHHHHH
T ss_pred HhCCEEEEeCCCCCCHH-------------------------------HHHHHHHhcCCCCCcEEEEcCCCCCCHHHHHH
Confidence 99999999986421000 122233333433 56778874222222222
Q ss_pred HH-HHHHhcCCceeeeeecccceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCC--ceEEeCCCCCC--
Q psy6858 271 KR-KELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENA--LQTTGSDNCTF-- 345 (592)
Q Consensus 271 ar-~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~--~~~~gsD~~~~-- 345 (592)
+- +. |. ++..++..... | .++......+.++++.+. .++++||....
T Consensus 229 ~l~~~----G~-----------yI~f~g~~~~~-~------------~~~~~ra~~l~~lv~~~p~drILleTDap~~~~ 280 (363)
T 3ovg_A 229 VIKET----GV-----------TLCFDGPDRVK-Y------------YPDSLLAENIKYLVDKGLQKHITLSLDAGRILY 280 (363)
T ss_dssp HHHHH----CC-----------EEEECCTTCTT-T------------CCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGG
T ss_pred HHHHC----Cc-----------EEEECCeeccc-c------------CChhHHHHHHHHHHHhcCCCeEEEeCCCCCCcC
Confidence 22 34 77 34444432110 0 000012345677787775 58899997522
Q ss_pred -ChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCccccCCCCccEE
Q psy6858 346 -NKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKGVIAEGSDADIV 419 (592)
Q Consensus 346 -~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G~I~~G~~ADlV 419 (592)
....+..|. +.++... +...+...+...+++.+++.+++|.||+++|++ +.++++.+|+.-+-|
T Consensus 281 l~~~G~~~g~--------~~n~p~~-l~~~~~~~a~~rGis~eei~~it~~Np~rlf~l-~~~~~~~~~~~~~~~ 345 (363)
T 3ovg_A 281 QRNYGLTKGK--------QTFGLAY-LFDRFLPLLKQVGVSKEAIFDILVNNPKRVLAF-DEKRNFDPLKVSKEV 345 (363)
T ss_dssp SHHHHHHTTE--------ECCCTHH-HHHTHHHHHHHHTCCHHHHHHHHTHHHHHHTSC-CCCCCCCGGGSCHHH
T ss_pred CCCCCccCCC--------CCCCccH-HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHCC-CCcCccCcccCCHHH
Confidence 111111000 0012122 222333344556899999999999999999999 678999999876544
No 73
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=98.52 E-value=8.7e-06 Score=80.68 Aligned_cols=125 Identities=10% Similarity=0.122 Sum_probs=71.4
Q ss_pred ccccCcCcccccCCCCChhhHHHHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeecccc-ccCCChH
Q psy6858 73 GIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVG-ITWWSDQ 151 (592)
Q Consensus 73 ~ID~HtH~~~~~~~~~~~d~~~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 151 (592)
+||+|+|+..+... .+.....+.+.+.||++++.... ...+....++..+.. ....+.+|+|.. ...+.+.
T Consensus 5 ~iD~H~Hl~~~~~~----~~~~~~l~~~~~~Gv~~~v~~~~--~~~~~~~~~~l~~~~--~~i~~~~G~hP~~~~~~~~~ 76 (264)
T 1xwy_A 5 MFDIGVNLTSSQFA----KDRDDVVACAFDAGVNGLLITGT--NLRESQQAQKLARQY--SSCWSTAGVHPHDSSQWQAA 76 (264)
T ss_dssp CEEEEECTTSGGGT----TTHHHHHHHHHHTTCCEEEECCC--SHHHHHHHHHHHHHS--TTEEEEECCCGGGGGGCCHH
T ss_pred EEEEeeCCCChhhc----cCHHHHHHHHHHCCCCEEEEeCC--CHHHHHHHHHHHHhC--CCEEEEEEECCcccccCCHH
Confidence 89999999754321 23444456778899999876532 112222222222222 234455666653 2234455
Q ss_pred HHHHHHHHHHHcCCcEEE-EEEeeCCCcCC---CHHHHHHHHHHHHHcCCeEEEecCc
Q psy6858 152 VQQEMAELCEKHGVNSFK-TFMAYKGLYML---SDGELYDAFSAIKNLGAIAMVHAEN 205 (592)
Q Consensus 152 ~~~~~~~lv~~~Gv~~~k-~~~~~~~~~~~---~~~~l~~~~~~a~~~g~~~~vHae~ 205 (592)
..+++++++...++..+. +.+.+...... ..+.|.+.++.|+++|+++.+|+..
T Consensus 77 ~~~~l~~~~~~~~~~~iGE~Gld~~~~~~~~~~q~~~f~~~l~~a~~~~lpv~iH~~~ 134 (264)
T 1xwy_A 77 TEEAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHCRD 134 (264)
T ss_dssp HHHHHHHHHTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEES
T ss_pred HHHHHHHHhcCCCeEEEEEeccCCCCCCCcHHHHHHHHHHHHHHHHHhCCcEEEEcCC
Confidence 667788777544444443 22333211111 1234888999999999999999864
No 74
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=98.51 E-value=2.4e-05 Score=77.85 Aligned_cols=127 Identities=13% Similarity=0.062 Sum_probs=73.1
Q ss_pred CccccCcCcccccCCCCChhhHHHHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccc--cC--
Q psy6858 72 GGIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGI--TW-- 147 (592)
Q Consensus 72 G~ID~HtH~~~~~~~~~~~d~~~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~--~~-- 147 (592)
++||+|+|+..+... .+...-...+.+.|++++++.... ..+....++. .........+.+|+|... ..
T Consensus 5 ~~iD~H~Hl~~~~~~----~~~~~~l~~~~~~Gv~~~v~~~~~--~~~~~~~~~l-~~~~~~~i~~~~GihP~~~~~~~~ 77 (272)
T 2y1h_A 5 GLVDCHCHLSAPDFD----RDLDDVLEKAKKANVVALVAVAEH--SGEFEKIMQL-SERYNGFVLPCLGVHPVQGLPPED 77 (272)
T ss_dssp CEEEEEECTTSGGGT----TTHHHHHHHHHHTTEEEEEECCSS--GGGHHHHHHH-HHHTTTTEEEEECCCSBC------
T ss_pred cEEEEeeCCCchhhh----cCHHHHHHHHHHCCCCEEEEeCCC--HHHHHHHHHH-HHHCCCCEEEEEEECCCccccccc
Confidence 599999999764322 234444667778999999876322 2233333332 222222355667777533 11
Q ss_pred ---CChHHHHHHHHHHHH--cCCcEEEE-EEeeCCCcC-------CCHHHHHHHHHHHHHcCCeEEEecCc
Q psy6858 148 ---WSDQVQQEMAELCEK--HGVNSFKT-FMAYKGLYM-------LSDGELYDAFSAIKNLGAIAMVHAEN 205 (592)
Q Consensus 148 ---~~~~~~~~~~~lv~~--~Gv~~~k~-~~~~~~~~~-------~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (592)
+.....+++.+++.+ ..+..+.. .+.++..+. ...+.|.+.++.|+++++++.+|+..
T Consensus 78 ~~~~~~~~~~~l~~~~~~~~~~~~~iGE~Gld~~~~~~~~~~~~~~q~~~f~~~~~la~~~~lPv~iH~~~ 148 (272)
T 2y1h_A 78 QRSVTLKDLDVALPIIENYKDRLLAIGEVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSRS 148 (272)
T ss_dssp -CBCCHHHHHHHHHHHHHHGGGCSEEEEEECCCCTTTCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEECTT
T ss_pred cccCCHHHHHHHHHHHHhCCCCEEEEEeccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCC
Confidence 334456677777653 23444432 223211111 12235888999999999999999865
No 75
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=98.29 E-value=1.6e-05 Score=80.33 Aligned_cols=129 Identities=12% Similarity=-0.004 Sum_probs=70.1
Q ss_pred EeeCccccCcCcccccCCC-----CC---hhhHHHHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeee
Q psy6858 69 VIPGGIDPHTHFELELMGA-----TS---VDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYA 140 (592)
Q Consensus 69 V~PG~ID~HtH~~~~~~~~-----~~---~d~~~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 140 (592)
+=+++||+|+|+..+.... .. ..+...-...+-+.||+.++-......+.. .+.+.+..+....+...-.+
T Consensus 23 ~p~~~iDtH~Hl~~~~~p~~~~~~~~p~~~~~~e~~l~~~~~~GV~~~V~v~~~~~~~~-n~~~~~~~~~~p~r~~g~~~ 101 (294)
T 4i6k_A 23 MKMNCIDTHAHVFSTQDHSIETARYAPDYEATVQSFISHLDEHNFTHGVLVQPSFLGTN-NQAMLNAIQQYPDRLKGIAV 101 (294)
T ss_dssp --CCSEEEEECCBCTTSCCCTTCSCCCCSCBCHHHHHHHHHHTTCCEEEEECCGGGTTC-CHHHHHHHHHSTTTEEEEEC
T ss_pred CCCCceEeeeEeecCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCeEEEecCcccccc-hHHHHHHHHHCCCeEEEEEE
Confidence 3347899999996543210 00 123334455666789988764321111111 11122222222222222234
Q ss_pred ccccccCCChHHHHHHHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCc
Q psy6858 141 LHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAEN 205 (592)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (592)
++... . .++++++.+ .|+.+++............++.+...++.|+++|+++.+|...
T Consensus 102 v~P~~---~---~~eL~~l~~-~gv~Gi~l~~~~~~~~~~~~~~~~~~~~~a~~~glpv~iH~~~ 159 (294)
T 4i6k_A 102 VQHTT---T---FNELVNLKA-QGIVGVRLNLFGLNLPALNTPDWQKFLRNVESLNWQVELHAPP 159 (294)
T ss_dssp CCTTC---C---HHHHHHHHT-TTEEEEEEECTTSCCCCSSSHHHHHHHHHHHHTTCEEEEECCH
T ss_pred eCCcc---c---HHHHHHHHH-CCCcEEEeccCCCCCCCcccHHHHHHHHHHHHcCCEEEEeeCc
Confidence 44321 1 356777654 4888888543222222456789999999999999999999764
No 76
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=98.22 E-value=4.6e-06 Score=85.54 Aligned_cols=258 Identities=17% Similarity=0.148 Sum_probs=132.9
Q ss_pred CccccCcCcccccC-------CCCChhh---HHHHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeec
Q psy6858 72 GGIDPHTHFELELM-------GATSVDD---FYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYAL 141 (592)
Q Consensus 72 G~ID~HtH~~~~~~-------~~~~~d~---~~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 141 (592)
|+..+|=|+..... .....++ .....+.+.+.|++||+|......+-. ...+.+..+.......+.-|+
T Consensus 17 G~t~~HEHl~~~~~~~~~~~~~~~~l~~~~~~~~el~~~~~~G~~tiVd~t~~~~gR~-~~~l~~is~~tgv~iv~~TG~ 95 (330)
T 3pnz_A 17 GFTYSHEHIVCVPAYWQERDADDLLLDDKEKSQLDVQDFADLGGKTIVDATAVDYGRR-VLDVAQISKETGIQIVGTAGF 95 (330)
T ss_dssp CSEEEEECCSBCCHHHHTTTCGGGCBCCHHHHHHHHHHHHHTTCCEEEECCCGGGCBC-HHHHHHHHHHHCCEEEEEEEC
T ss_pred CCceeccCceecChhhhhcCCCcccccCHHHHHHHHHHHHHhCCCEEEECCCCccccC-HHHHHHHHHHhCCEEEEeCCC
Confidence 78888999844210 1112222 233445566799999999875555533 344555555555566777777
Q ss_pred ccccc--------------------CCCh-HHHHHHHHHH-HH--cC-----CcE--EEEEEeeCCCcCCCHHH---HHH
Q psy6858 142 HVGIT--------------------WWSD-QVQQEMAELC-EK--HG-----VNS--FKTFMAYKGLYMLSDGE---LYD 187 (592)
Q Consensus 142 ~~~~~--------------------~~~~-~~~~~~~~lv-~~--~G-----v~~--~k~~~~~~~~~~~~~~~---l~~ 187 (592)
+.... .|.. ...+++.++. ++ .| +.. +++.++|+ ..++.| |.+
T Consensus 96 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~ei~~Gi~~t~vkaGvIEiGld~~---~~~~~q~~~f~a 172 (330)
T 3pnz_A 96 NKSFLWDGKIKPELKPIIGDFETYYEWIENTTTDKLTEFVVNEVENGLEGTPYKAGQVKFGTGYN---MITPLEEKTIRA 172 (330)
T ss_dssp CCGGGGGSBCCGGGHHHHCSCSBHHHHHHTSCHHHHHHHHHHHHHTCSTTSSCCEEEEEEECBTT---BCCHHHHHHHHH
T ss_pred CccccccccccccccccccccccCchhhccCCHHHHHHHHHHHHHhhCCCcCcCcCeEEEEcCCC---CCCHHHHHHHHH
Confidence 65321 1100 0123333322 11 23 332 46666654 234443 778
Q ss_pred HHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCC---EEEEecc-cHH
Q psy6858 188 AFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCP---LYVVHIM-SKA 263 (592)
Q Consensus 188 ~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~p---l~i~hv~-s~~ 263 (592)
.++.|+++|+++.+|...+.... + .+++.++.+.+ +.+.|+. +.+
T Consensus 173 q~~~A~~~glPViiH~r~g~~a~---------------------------~----~l~iL~e~~~~~~~vvi~H~~~s~~ 221 (330)
T 3pnz_A 173 VARAHHETKAPIHSHTEAGTMAL---------------------------E----QIEILKQENIPLEYLSIGHMDRNLD 221 (330)
T ss_dssp HHHHHHHHCCCEEEECGGGCCHH---------------------------H----HHHHHHHTTCCGGGEEETTGGGSCC
T ss_pred HHHHHHHHCCeEEEeCCCCcChH---------------------------H----HHHHHHHcCCCCCeEEEecCCCCCC
Confidence 88999999999999987531011 1 12233333433 4456875 432
Q ss_pred HHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCC--ceEEeCC
Q psy6858 264 AGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENA--LQTTGSD 341 (592)
Q Consensus 264 a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~--~~~~gsD 341 (592)
.+....+-+. |. ++..++..... +.++......+.++++.|. .++++||
T Consensus 222 -~e~a~~~l~~----G~-----------~i~~~g~~t~~-------------~~~~~~~~~~l~~lv~~g~~drilleTD 272 (330)
T 3pnz_A 222 -PYYHKQVAKT----GA-----------FMSFDGIAKIK-------------YAPESARIAAILYLVSEGFEDQILVSGD 272 (330)
T ss_dssp -HHHHHHHHTT----TC-----------EEEECCTTCTT-------------TCCHHHHHHHHHHHHHTTCGGGEEECCC
T ss_pred -HHHHHHHHHc----Cc-----------EEEEccCcccC-------------CCChHHHHHHHHHHHHcCCCCeEEEeCC
Confidence 2222222222 66 33444321110 0000012345667777774 5788998
Q ss_pred CCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhh---ccCCCCCHHH-HHHHHhHhHHHHcCC
Q psy6858 342 NCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKG---VVPGILSPEK-FVAVTSTNAAKIFNL 403 (592)
Q Consensus 342 ~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~---v~~~~l~~~e-~v~~~T~n~Ak~lgl 403 (592)
..- ....+..|+ .+|. ..-+..+..++ +...+++.++ +.+++|.||+++|++
T Consensus 273 ~p~-~~~~~~~G~------~~~~---~~~~~~~~~~l~~~a~~~Gis~ee~i~~~t~~Np~rlf~l 328 (330)
T 3pnz_A 273 TAR-KTYYKHYGH------GPGL---EYIAKKWVPRFIDEANEKGFDGEKLVKKFFVDNPARCFTF 328 (330)
T ss_dssp CCS-GGGSHHHHC------CSTT---THHHHTHHHHHHHHHHHTTSCHHHHHHHHHTHHHHHHSSC
T ss_pred CCC-CCCCCccCC------CCCc---chHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhHHHHhcC
Confidence 642 111111121 1121 11122222222 3456799998 999999999999998
No 77
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=98.20 E-value=5.4e-05 Score=78.70 Aligned_cols=241 Identities=15% Similarity=0.065 Sum_probs=121.9
Q ss_pred HHHHHHHcCCeeEEeccc-cCCCCccHHHHHHHHHHHhccCceeeeeccccc--cCCChHHHHHHHHHHHH---cCC---
Q psy6858 95 HGTKAAVAGGTTTIIDFA-LPRKGESLIKTYESWRQKADEKVCCDYALHVGI--TWWSDQVQQEMAELCEK---HGV--- 165 (592)
Q Consensus 95 ~~~~~ala~GtTti~d~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~lv~~---~Gv--- 165 (592)
...+.+.+.|+|||++.. ....+.+........+ ......++..|+|..- +.|.....+++.+++.. .|+
T Consensus 79 ~el~~~~~aGv~tiV~~~g~~g~~r~~~~l~~la~-~~gi~i~~~tG~y~~~~~P~~~~~~~~~L~~~~~~ei~~gi~~t 157 (365)
T 3rhg_A 79 FELNNFKELGGKTIVDATGSSSIGRDIRKLKQVAE-LTGINVVASSGLYIEKFEGKRLADDIDAMAKMIDDELNIGIDGT 157 (365)
T ss_dssp HHHHHHHHTTEEEEEECCCSGGGTCCHHHHHHHHH-HHCCEEECEECCCCHHHHGGGGGSCHHHHHHHHHHHHHTCSTTS
T ss_pred HHHHHHHhcCCCeEEEcCCCCCCCCCHHHHHHHHH-HHCCcEEEEeCccCCCCCchhhcCCHHHHHHHHHHHHHhccccC
Confidence 344566789999999886 3223334333333333 2222456677777221 21211123455444322 232
Q ss_pred --c--EE-EEEEeeCCCcCCCHHH---HHHHHHHHHHc-CCeEEEec-CchhhhHHHHHHHHHcCCCCCCCccCCCcHHH
Q psy6858 166 --N--SF-KTFMAYKGLYMLSDGE---LYDAFSAIKNL-GAIAMVHA-ENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEV 235 (592)
Q Consensus 166 --~--~~-k~~~~~~~~~~~~~~~---l~~~~~~a~~~-g~~~~vHa-e~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~ 235 (592)
. .+ .+.+++ ..++.| |.+.++.++++ |+++.+|. ..+...
T Consensus 158 ~vkag~IGEiGld~----~~t~~q~~~f~aq~~~A~~~~glPV~iH~~r~~~a~-------------------------- 207 (365)
T 3rhg_A 158 DIRAGMIGEIGVSP----FFTDGEKNSLRAAALAQNNNPYASMNIHMPGWQRRG-------------------------- 207 (365)
T ss_dssp SCCCCEEEEEECCT----TCCHHHHHHHHHHHHHHTTCTTCEEEEECCTTSCCH--------------------------
T ss_pred CceeEEEEEEEcCC----CCCHHHHHHHHHHHHHHHHhcCCcEEEECCCCCcCH--------------------------
Confidence 1 12 222221 244544 77778889999 99999997 532111
Q ss_pred HHHHHHHHHHHhccc-CCC---EEEEecc-cHHHHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCcccccccc
Q psy6858 236 EAEAVTRACTIANQV-DCP---LYVVHIM-SKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAH 310 (592)
Q Consensus 236 e~eav~~~i~la~~~-~~p---l~i~hv~-s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~~~~~~~~ 310 (592)
...+.+.++. +.+ +.+.|+. +....+....+.+. |. ++..++......+... ..
T Consensus 208 -----~e~l~iL~e~~~~~~~~vvi~H~~rs~~~~e~a~~~l~~----G~-----------~I~~~g~g~~~tf~~~-~~ 266 (365)
T 3rhg_A 208 -----DEVLDILLTEMGCDPAKISLAHSDPSGKDIDYQCKMLDR----GV-----------WLEFDMIGLDISFPKE-GA 266 (365)
T ss_dssp -----HHHHHHHTTTTCCCGGGEEESCCGGGTTCHHHHHHHHHT----TC-----------EEEECCTTCCCBCSSS-CB
T ss_pred -----HHHHHHHHhccCCCCCceEEecCCCCCCCHHHHHHHHhC----CC-----------EEEecCCCcccccccc-cc
Confidence 1123334444 544 4567888 42334444444344 77 3444443110000000 00
Q ss_pred eecCCCCCCCCCHHHHHHHHhcCC--ceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHH
Q psy6858 311 VLSPPLRPDETTPTHLLTLLNENA--LQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEK 388 (592)
Q Consensus 311 ~~~pplr~~~~~~~~l~~~l~~G~--~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e 388 (592)
.| .+....+.+.++++.|. .++++||... .......|+ ++...-+.. +...+...+++.++
T Consensus 267 --~~---~d~~~a~~l~~li~~g~~drilleTD~p~-l~~~~~~G~----------~~~~~l~~~-~~~~~~~~Gis~e~ 329 (365)
T 3rhg_A 267 --AP---SVMDTVEAVATLIERGYGNQIVLSHDVFL-KQMWAKNGG----------NGWGFVPNV-FLSLLAQRGIDKTI 329 (365)
T ss_dssp --CC---CHHHHHHHHHHHHHTTCGGGEEECCCCCS-GGGSGGGTS----------CTTTHHHHT-HHHHHHHTTCCHHH
T ss_pred --cc---chHHHHHHHHHHHHhCCCCcEEEeCCCCC-CCCCCcCCC----------CCchhHHHH-HHHHHHHcCCCHHH
Confidence 00 00112356778888885 5788999753 222222321 222222221 22233456799999
Q ss_pred HHHHHhHhHHHHcCCC
Q psy6858 389 FVAVTSTNAAKIFNLY 404 (592)
Q Consensus 389 ~v~~~T~n~Ak~lgl~ 404 (592)
+.+++|.||+++|++.
T Consensus 330 i~~~~~~Np~rlf~l~ 345 (365)
T 3rhg_A 330 IDKLCIDNPANLLAAE 345 (365)
T ss_dssp HHHHTTHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHCCC
Confidence 9999999999999994
No 78
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=98.20 E-value=4.3e-05 Score=75.45 Aligned_cols=125 Identities=15% Similarity=0.120 Sum_probs=68.1
Q ss_pred ccccCcCcccccCCCCChhhHHHHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccc-cCCChH
Q psy6858 73 GIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGI-TWWSDQ 151 (592)
Q Consensus 73 ~ID~HtH~~~~~~~~~~~d~~~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 151 (592)
+||+|+|+..+... .+...-.+.+.+.|++.++..... . ...+.+.+...... .....+++|... ..+.++
T Consensus 2 ~iD~H~Hl~~~~~~----~~~~~~l~~~~~~Gv~~~v~~~~~--~-~~~~~~~~~~~~~p-~~~~~~g~~P~~~~~~~~~ 73 (265)
T 2gzx_A 2 LIDTHVHLNDEQYD----DDLSEVITRAREAGVDRMFVVGFN--K-STIERAMKLIDEYD-FLYGIIGWHPVDAIDFTEE 73 (265)
T ss_dssp CEEEEECTTSGGGT----TTHHHHHHHHHHTTCCEEEEEECS--H-HHHHHHHHHHHHCT-TEEEEECCCGGGGGGCCHH
T ss_pred eEEEeeCCCCcccc----cCHHHHHHHHHHcCCCEEEEeCCC--H-HHHHHHHHHHHhCC-CEEEEEEeccCccccCCHH
Confidence 69999999754321 123334556667899887654321 1 11222222222222 234444554321 223344
Q ss_pred HHHHHHHHHHHcCCcEEEEE-EeeCC---CcCCCHHHHHHHHHHHHHcCCeEEEecCc
Q psy6858 152 VQQEMAELCEKHGVNSFKTF-MAYKG---LYMLSDGELYDAFSAIKNLGAIAMVHAEN 205 (592)
Q Consensus 152 ~~~~~~~lv~~~Gv~~~k~~-~~~~~---~~~~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (592)
..++++++++..++..+... +.+.. .....++.+...++.|.++|+++.+|+..
T Consensus 74 ~~~~l~~~~~~~~~~~iGe~Gl~~~~~~~~~~~~~~~~~~~~~~a~~~~~pv~iH~~~ 131 (265)
T 2gzx_A 74 HLEWIESLAQHPKVIGIGEMGLDYHWDKSPADVQKEVFRKQIALAKRLKLPIIIHNRE 131 (265)
T ss_dssp HHHHHHHHTTSTTEEEEEEEEEECSCCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEES
T ss_pred HHHHHHHHhcCCCEEEEEeccCCCCCCCCCHHHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 56777777654333333321 12211 11234556899999999999999999864
No 79
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=98.17 E-value=7.5e-05 Score=77.62 Aligned_cols=243 Identities=16% Similarity=0.102 Sum_probs=122.8
Q ss_pred HHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccc--cCCC-hHHHHHHHHHHHH---cC----
Q psy6858 95 HGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGI--TWWS-DQVQQEMAELCEK---HG---- 164 (592)
Q Consensus 95 ~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~lv~~---~G---- 164 (592)
...+.+.+.|+||+++......+.+.....+..+. .....++..|+|..- +.|. ....+++.+++.. .|
T Consensus 90 ~~l~~~~~aGv~tiV~~t~~g~gr~~~~l~~la~~-~gv~i~~~tG~y~~~~~P~~~~~~~~~~L~~~~~~ei~~Gi~~~ 168 (364)
T 3k2g_A 90 AEVKQFAAVGGRSIVDPTCRGIGRDPVKLRRISAE-TGVQVVMGAGYYLASSMPETAARLSADDIADEIVAEALEGTDGT 168 (364)
T ss_dssp HHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHH-HCCEEEECCSBCCGGGCCGGGGTCCHHHHHHHHHHHHHTCBTTB
T ss_pred HHHHHHHhcCCCeEEEeCCCcccCCHHHHHHHHHH-hCCcEEEEeCccCCCCCchhhccCCHHHHHHHHHHHHHhccccC
Confidence 34455678999999988643333344333333333 222456677777322 1111 1123555554322 12
Q ss_pred -CcE--E-EEEEeeCCCcCCCHHH---HHHHHHHHHHcCCeEEEecCc-hhhhHHHHHHHHHcCCCCCCCccCCCcHHHH
Q psy6858 165 -VNS--F-KTFMAYKGLYMLSDGE---LYDAFSAIKNLGAIAMVHAEN-GEIIDKNTQKLLAAGIKGPEGHQLSRPEEVE 236 (592)
Q Consensus 165 -v~~--~-k~~~~~~~~~~~~~~~---l~~~~~~a~~~g~~~~vHae~-~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e 236 (592)
+.. + .+.+++ ..++.| |.+.++.|++.|+++.+|... +....
T Consensus 169 ~vkag~IGEiGld~----~~t~~q~~~f~aq~~~A~~~glPV~iH~~gr~~a~~-------------------------- 218 (364)
T 3k2g_A 169 DARIGLIGEIGVSS----DFTAEEEKSLRGAARAQVRTGLPLMVHLPGWFRLAH-------------------------- 218 (364)
T ss_dssp SCCCSSEEEEECCT----TCCHHHHHHHHHHHHHHHHHCCCEEEECCTTSCCHH--------------------------
T ss_pred CcceeEEEEEEcCC----CCCHHHHHHHHHHHHHHHHHCCeEEEecCCCCccHH--------------------------
Confidence 211 2 233332 234443 777888899999999999741 11011
Q ss_pred HHHHHHHHHHhcccCCC---EEEEeccc-HHHHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCccccccccee
Q psy6858 237 AEAVTRACTIANQVDCP---LYVVHIMS-KAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVL 312 (592)
Q Consensus 237 ~eav~~~i~la~~~~~p---l~i~hv~s-~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~~~~~~~~~~ 312 (592)
..+.+.++.+.+ +.+.|+.. ....+....+-+. |. ++..++......+... . ..
T Consensus 219 -----e~l~iL~e~g~~~~~vvi~H~~~s~~~~e~a~~~l~~----G~-----------~I~f~g~gt~~~f~~~-~-~~ 276 (364)
T 3k2g_A 219 -----RVLDLVEEEGADLRHTVLCHMNPSHMDPVYQATLAQR----GA-----------FLEFDMIGMDFFYADQ-G-VQ 276 (364)
T ss_dssp -----HHHHHHHHTTCCGGGEEECCCGGGTTCHHHHHHHHHH----TC-----------EEEECCTTCCCEETTT-T-EE
T ss_pred -----HHHHHHHHcCCCCCceEEECCCCCCCCHHHHHHHHhC----Cc-----------EEEecCCccccccccc-c-cc
Confidence 122233334444 45669883 4134444444445 77 3444443110000000 0 00
Q ss_pred cCCCCCCCCCHHHHHHHHhcCC--ceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHH
Q psy6858 313 SPPLRPDETTPTHLLTLLNENA--LQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFV 390 (592)
Q Consensus 313 ~pplr~~~~~~~~l~~~l~~G~--~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v 390 (592)
.|. +....+.+.++++.|. .+++.||.... ......| | ++...-+..+...+ ...+++.+++.
T Consensus 277 ~~~---d~~ra~~l~~lv~~gp~drilleTD~p~~-~~~~~~g---------g-~~~~~l~~~~~~~l-~~~Gis~eei~ 341 (364)
T 3k2g_A 277 CPS---DDEVARAILGLADHGYLDRILLSHDVFVK-MMLTRYG---------G-NGYAFVTKHFLPRL-RRHGLDDAALE 341 (364)
T ss_dssp CCC---HHHHHHHHHHHHHTTCGGGEEECCCCCSG-GGSGGGT---------S-CTTSHHHHHHHHHH-HHTTCCHHHHH
T ss_pred ccc---HHHHHHHHHHHHHhCCcccEEEeCCCCCC-CCCCCCC---------C-CCcchHHHHHHHHH-HHcCCCHHHHH
Confidence 010 0112356777888884 68899997432 1111111 1 22222222222222 34579999999
Q ss_pred HHHhHhHHHHcCCCC
Q psy6858 391 AVTSTNAAKIFNLYP 405 (592)
Q Consensus 391 ~~~T~n~Ak~lgl~~ 405 (592)
+++|.||+++|++++
T Consensus 342 ~~~~~Np~rlf~l~~ 356 (364)
T 3k2g_A 342 TLMVTNPRRVFDASI 356 (364)
T ss_dssp HHHTHHHHHHHCTTS
T ss_pred HHHHHHHHHHhCCCc
Confidence 999999999999964
No 80
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=98.15 E-value=5.5e-05 Score=74.73 Aligned_cols=125 Identities=13% Similarity=0.098 Sum_probs=64.9
Q ss_pred ccccCcCcccccCCCCChhhHHHHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChH-
Q psy6858 73 GIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQ- 151 (592)
Q Consensus 73 ~ID~HtH~~~~~~~~~~~d~~~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 151 (592)
+||+|+|+..+.... ...+...-.+.+.+.|++.++... ......+.+.+..... +......++|.. +..+
T Consensus 3 ~iD~H~Hl~~~~~~~-~~~~~~~~l~~~~~~Gv~~~v~~~---~~~~~~~~~~~~~~~~-p~~~~~~g~hP~---~~~~~ 74 (265)
T 1yix_A 3 LVDSHCHLDGLDYES-LHKDVDDVLAKAAARDVKFCLAVA---TTLPSYLHMRDLVGER-DNVVFSCGVHPL---NQNDP 74 (265)
T ss_dssp EEEEEECGGGSCTTT-TCSSHHHHHHHHHHTTEEEEEECC---SSHHHHHHHHHHHCSC-TTEEEEECCCTT---CCSSC
T ss_pred EEEEeeCCCchhhcc-cccCHHHHHHHHHHCCCCEEEEeC---CCHHHHHHHHHHHHHC-CCeEEEEEeCCC---ccccc
Confidence 799999997543311 012344446667789999986542 1111112222222111 123344455432 1111
Q ss_pred -HHHHHHHHHHHcCCcEEEE-EEeeCCC---cCCCHHHHHHHHHHHHHcCCeEEEecCc
Q psy6858 152 -VQQEMAELCEKHGVNSFKT-FMAYKGL---YMLSDGELYDAFSAIKNLGAIAMVHAEN 205 (592)
Q Consensus 152 -~~~~~~~lv~~~Gv~~~k~-~~~~~~~---~~~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (592)
..++++++++...+..+.. .+.+... ....++.+.+.++.|+++|+++.+|+..
T Consensus 75 ~~~~~l~~~~~~~~~~~iGe~Gl~~~~~~~~~~~q~~~~~~~~~~a~~~~~pv~iH~~~ 133 (265)
T 1yix_A 75 YDVEDLRRLAAEEGVVALGETGLDYYYTPETKVRQQESFIHHIQIGRELNKPVIVHTRD 133 (265)
T ss_dssp CCHHHHHHHHTSTTEEEEEEEEEECTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEES
T ss_pred chHHHHHHHhccCCeEEEEccccCCCcCCCChHHHHHHHHHHHHHHHHhCCCEEEEecC
Confidence 2567777765322222211 1222111 1223456888999999999999999864
No 81
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=98.11 E-value=0.00023 Score=72.58 Aligned_cols=132 Identities=15% Similarity=0.037 Sum_probs=77.8
Q ss_pred CccccCcCcccccCC------CCChhhHHHHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhc---cCceeeeecc
Q psy6858 72 GGIDPHTHFELELMG------ATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKAD---EKVCCDYALH 142 (592)
Q Consensus 72 G~ID~HtH~~~~~~~------~~~~d~~~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~---~~~~~~~~~~ 142 (592)
-+||+|+|+..+.+. ....+|+..-...|.+.||..++... ....+...+++..+.... ...++.+|+|
T Consensus 27 ~~iDtH~HL~~~~f~g~y~gk~~h~~d~~~vl~rA~~aGV~~ii~~g--~~~~~~~~~~~La~~~~~~~~~~v~~~~GiH 104 (325)
T 3ipw_A 27 QFIDIGANLTDDNYFGNYHGKHYHEEDIDVVLQRAERNGLSHIIITS--GCLNDFKKAIEIINKYQNLTNIKLVTTIGVH 104 (325)
T ss_dssp CEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECC--CSHHHHHHHHHHHHHHGGGCSSEEEEEECCC
T ss_pred CeEEEEECCCchHhccccccccccccCHHHHHHHHHHcCCcEEEEcc--CCHHHHHHHHHHHHHCCCcccceEEEEEEEC
Confidence 499999999765441 01134566667888899999986442 222233333333333321 0356778888
Q ss_pred ccc-cCCChH-HHHHHHHHHHHc--CCcEEE-EEEeeCCCcCCC----HHHHHHHHHHHHH-cCCeEEEecCc
Q psy6858 143 VGI-TWWSDQ-VQQEMAELCEKH--GVNSFK-TFMAYKGLYMLS----DGELYDAFSAIKN-LGAIAMVHAEN 205 (592)
Q Consensus 143 ~~~-~~~~~~-~~~~~~~lv~~~--Gv~~~k-~~~~~~~~~~~~----~~~l~~~~~~a~~-~g~~~~vHae~ 205 (592)
... ..+.++ ..++++++++.. .+..+. +.+.|......+ .+-|.+.++.|++ +++++.+|+.+
T Consensus 105 P~~~~~~~~~~~l~~L~~l~~~~~~~vvAIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~~lPviiH~r~ 177 (325)
T 3ipw_A 105 PTRTNELKQEGYLDELLLLCEKNIDKVVAIGEIGLDYERLQFSDKETQLSGYRTLSILHQKYPYLPFFFHCRK 177 (325)
T ss_dssp GGGGGGGGSTTHHHHHHHHHHHTGGGEEEEEEEEEETTCCSSSCHHHHHHHHHHTHHHHHHCTTCCEEEEEES
T ss_pred cchhhcCCchHHHHHHHHHHhcCCCCEEEEEeeecCCCcCCCCCHHHHHHHHHHHHHHHHHhhCCeEEEEeCc
Confidence 642 233333 677888887652 333332 334443211112 2347788899999 99999999876
No 82
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=98.04 E-value=7.1e-06 Score=80.94 Aligned_cols=119 Identities=11% Similarity=0.011 Sum_probs=68.4
Q ss_pred ccccCcCcccccCCCCChhhHHHHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChHH
Q psy6858 73 GIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQV 152 (592)
Q Consensus 73 ~ID~HtH~~~~~~~~~~~d~~~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (592)
+||+|||+... ++...-...|.+.||..++ + +....+...+++..... ....+.+|+|........+.
T Consensus 3 liDtH~HL~~~-------~d~~~vl~~a~~~gV~~i~--v-~~~~~~~~~~~~la~~~--~~v~~~~GiHP~~~~~~~~~ 70 (254)
T 3gg7_A 3 LIDFHVHLDLY-------PDPVAVARACEERQLTVLS--V-TTTPAAWRGTLALAAGR--PHVWTALGFHPEVVSERAAD 70 (254)
T ss_dssp CEEEEECGGGS-------SSHHHHHHHHHHTTCEEEE--C-CSSGGGHHHHHGGGTTC--TTEEECBCCCGGGTTTTGGG
T ss_pred eEEEeeCCCCC-------CCHHHHHHHHHHCCCcEEE--e-cCCHHHHHHHHHHHHhC--CCeEEEEeeCcccccccHHH
Confidence 89999999743 2455556777889998875 2 22222322222222111 24667788887543222345
Q ss_pred HHHHHHHHHHcCCcEEE-EEEeeCCCc----CCCHHHHHHHHHHHHHcCCeEE-EecCc
Q psy6858 153 QQEMAELCEKHGVNSFK-TFMAYKGLY----MLSDGELYDAFSAIKNLGAIAM-VHAEN 205 (592)
Q Consensus 153 ~~~~~~lv~~~Gv~~~k-~~~~~~~~~----~~~~~~l~~~~~~a~~~g~~~~-vHae~ 205 (592)
.+++++++.+ +..+. +.+.|.... ....+-|.+.++.|++++.++. +|+.+
T Consensus 71 l~~l~~~~~~--~vaIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~lPviSiH~r~ 127 (254)
T 3gg7_A 71 LPWFDRYLPE--TRFVGEVGLDGSPSLRGTWTQQFAVFQHILRRCEDHGGRILSIHSRR 127 (254)
T ss_dssp THHHHHHGGG--CSEEEEEECCCCGGGGGGHHHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHhhh--ccEEEEEecCCCcccCCCHHHHHHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 5667766632 33332 333332111 1122337888999999999997 99876
No 83
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=98.00 E-value=4.3e-05 Score=78.64 Aligned_cols=259 Identities=15% Similarity=0.138 Sum_probs=131.3
Q ss_pred CccccCcCcccccC--------CCCCh-hhHH---HHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeee
Q psy6858 72 GGIDPHTHFELELM--------GATSV-DDFY---HGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDY 139 (592)
Q Consensus 72 G~ID~HtH~~~~~~--------~~~~~-d~~~---~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 139 (592)
|+..+|=|+..... ..+.. +++. ...+.+.+.|++++++......+.+.....+..+ ......++..
T Consensus 32 G~t~~HEHl~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~a~~aGv~tiV~~~~~~~~r~~~~l~~la~-~~g~~i~~~t 110 (339)
T 3gtx_A 32 GATLPHEHVIFGYPGYAGDVTLGPFDHAAALASCTETARALLARGIQTVVDATPNGCGRNPAFLREVSE-ATGLQILCAT 110 (339)
T ss_dssp CEEEEEEEEEECCTTGGGGTTTSCCCHHHHHHHHHHHHHHHHHTTEEEEEECCCTTTTCCHHHHHHHHH-HHCCEEECEE
T ss_pred CCeeeccCeeccCcccccCCCccccchHHHHHHHHHHHHHHHHhCCCeEEecCCCccCcCHHHHHHHHH-HcCCcEEEEc
Confidence 78888998843211 11122 2222 3344567799999998763223334333333333 2222456677
Q ss_pred eccccc------cCCCh---HHHHHHHHHHHH---cCC-------cEEEEEEeeCCCcCCCHHH---HHHHHHHHHHcCC
Q psy6858 140 ALHVGI------TWWSD---QVQQEMAELCEK---HGV-------NSFKTFMAYKGLYMLSDGE---LYDAFSAIKNLGA 197 (592)
Q Consensus 140 ~~~~~~------~~~~~---~~~~~~~~lv~~---~Gv-------~~~k~~~~~~~~~~~~~~~---l~~~~~~a~~~g~ 197 (592)
|+|..- +.|.. ...+++.+++.. .|+ ..+++.++|+ ..++.| |.+.++.|+++|+
T Consensus 111 G~hp~~~~~~~~~~~~~~~~~~~~~L~~~~~~e~~~gIg~tg~k~g~IEigld~~---~~~~~q~~~f~aq~~lA~~~gl 187 (339)
T 3gtx_A 111 GFYYEGGGATTYFKFRASLGDAESEIYEMMRTEVTEGIAGTGIRAGVIKLASSRD---AITPYEQLFFRAAARVQRETGV 187 (339)
T ss_dssp CCCCTTTSSCHHHHHHHHHSCHHHHHHHHHHHHHHTCSTTSSCCCSEEEEECCSS---CCCHHHHHHHHHHHHHHHHHCC
T ss_pred CCCccCccCCcCCcccccccCCHHHHHHHHHHHHHhcccccCcccceEEEEcCCC---CCCHHHHHHHHHHHHHHHHHCC
Confidence 777631 11111 123556554432 121 2336666664 344444 7778889999999
Q ss_pred eEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcccCCC---EEEEecc-cHHHHHHHHHHHH
Q psy6858 198 IAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQVDCP---LYVVHIM-SKAAGDAMAYKRK 273 (592)
Q Consensus 198 ~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~~~~p---l~i~hv~-s~~a~~~i~~ar~ 273 (592)
++.+|...+.... + .+++.++.+.+ +.+.|+. +.+ .+....+-+
T Consensus 188 PViiH~~~gr~a~---------------------------~----~~~iL~~~~~~~~~~vi~H~~~~~~-~e~a~~~l~ 235 (339)
T 3gtx_A 188 PIITHTQEGQQGP---------------------------Q----QAELLTSLGADPARIMIGHMDGNTD-PAYHRETLR 235 (339)
T ss_dssp CEEEECSTTCCHH---------------------------H----HHHHHHHTTCCGGGEEECCGGGCCC-HHHHHHHHT
T ss_pred eEEEeCCCCcCHH---------------------------H----HHHHHHHcCCCcccEEEEccCCCCC-HHHHHHHHH
Confidence 9999984321000 1 13334444443 4567886 333 333333322
Q ss_pred HHHhcCCceeeeeecccceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCC--ceEEeCCCCCCC-----
Q psy6858 274 ELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENA--LQTTGSDNCTFN----- 346 (592)
Q Consensus 274 ~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~--~~~~gsD~~~~~----- 346 (592)
. |. ++..++..... |...| . +....+.+.++++.+. .+++.||..-..
T Consensus 236 ~----G~-----------~i~~~g~~t~~-------~~~~p-~--~~~~~~~l~~li~~~~~drilleTD~p~~~~~~P~ 290 (339)
T 3gtx_A 236 H----GV-----------SIAFDRIGLQG-------MVGTP-T--DAERLSVLTTLLGEGYADRLLLSHDSIWHWLGRPP 290 (339)
T ss_dssp T----TC-----------EEEECCTTCCS-------STTCC-C--HHHHHHHHHHHHHTTCGGGEEECCCCEEEESSSCC
T ss_pred c----Cc-----------EEEEccCcccc-------ccCCC-c--hHHHHHHHHHHHHhcCCCeEEEecCCCccccCCcc
Confidence 3 66 33444431100 00000 0 0012345677787765 578899965210
Q ss_pred ---hhh-hhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcC
Q psy6858 347 ---KNQ-KELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFN 402 (592)
Q Consensus 347 ---~~~-~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lg 402 (592)
... +..+ .++.. .+...+...+...+++.+++.+++|.||+++|+
T Consensus 291 ~~p~~~~~~~g----------~n~p~-~l~~~~~~~~~~~Gis~e~i~~~~~~Np~rlf~ 339 (339)
T 3gtx_A 291 AIPEAALPAVK----------DWHPL-HISDDILPDLRRRGITEEQVGQMTVGNPARLFG 339 (339)
T ss_dssp CCCGGGHHHHH----------TCSTT-HHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHHC
T ss_pred cccccccccCC----------CCCch-hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhC
Confidence 000 1111 11211 222223334455689999999999999999986
No 84
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=97.95 E-value=4.2e-05 Score=77.51 Aligned_cols=130 Identities=13% Similarity=0.064 Sum_probs=69.5
Q ss_pred CccccCcCcccccCCC------CChhhHHHHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccc
Q psy6858 72 GGIDPHTHFELELMGA------TSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGI 145 (592)
Q Consensus 72 G~ID~HtH~~~~~~~~------~~~d~~~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 145 (592)
.+||+|+|+..+.... ...++.......+.+.||++++.... ...+...+.+..+. . ....+.+|+|...
T Consensus 2 ~~iD~H~Hl~~~~~~~~~~~~~~h~~d~~~vl~~~~~~GV~~~v~~~~--~~~~~~~~~~la~~-~-~~v~~~~GiHP~~ 77 (301)
T 2xio_A 2 KFIDIGINLTDPMFRGIYRGVQKHQDDLQDVIGRAVEIGVKKFMITGG--NLQDSKDALHLAQT-N-GMFFSTVGCHPTR 77 (301)
T ss_dssp CEEEEEECTTCGGGGTEETTEECSCCCHHHHHHHHHHHTEEEEEECCC--SHHHHHHHHHHHTT-C-TTEEEEECCCGGG
T ss_pred eEEEEcCCCCChHhcccccccccCccCHHHHHHHHHHCCCCEEEEeCC--CHHHHHHHHHHHHH-C-CCEEEEEEECcCh
Confidence 4899999997654321 00134555566777889999876632 11122222222111 1 2344556666532
Q ss_pred c-CCC----hHHHHHHHHHHHHc--CCcEEE-EEEeeCCC-cC---CCHHHHHHHHHHHHHcCCeEEEecCc
Q psy6858 146 T-WWS----DQVQQEMAELCEKH--GVNSFK-TFMAYKGL-YM---LSDGELYDAFSAIKNLGAIAMVHAEN 205 (592)
Q Consensus 146 ~-~~~----~~~~~~~~~lv~~~--Gv~~~k-~~~~~~~~-~~---~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (592)
. .+. +...+++++++.+. .+..+. +.+.+... .. ...+-|.+.++.|+++++++.+|+.+
T Consensus 78 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~aIGEiGLd~~~~~~~~~~~Q~~~f~~ql~lA~~~~lPv~iH~r~ 149 (301)
T 2xio_A 78 CGEFEKNNPDLYLKELLNLAENNKGKVVAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHCRN 149 (301)
T ss_dssp THHHHHHCHHHHHHHHHHHHHTCTTTEEEEEEEEEETTCTTTSCHHHHHHHHHHTHHHHHHHCCCEEEEEES
T ss_pred hhhCcccccHHHHHHHHHHHhcCCCCeEEEEEeeCCCCcCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEecC
Confidence 1 111 13456777777542 233332 23333211 11 11245788889999999999999864
No 85
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=97.94 E-value=4.9e-05 Score=76.09 Aligned_cols=126 Identities=15% Similarity=0.049 Sum_probs=69.8
Q ss_pred CccccCcCcccccC---C-----CCChhhHHHHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccc
Q psy6858 72 GGIDPHTHFELELM---G-----ATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHV 143 (592)
Q Consensus 72 G~ID~HtH~~~~~~---~-----~~~~d~~~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 143 (592)
++||+|+|+..+.. . .....+...-.+.+-+.||+..+-......+... +.+.++.+....+...-.+++.
T Consensus 13 ~iID~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~~~~~~~~~n-~~~~~~~~~~p~r~~~~~~v~p 91 (288)
T 2ffi_A 13 TAIDSHAHVFSRGLNLASQRRYAPNYDAPLGDYLGQLRAHGFSHGVLVQPSFLGTDN-RYLLSALQTVPGQLRGVVMLER 91 (288)
T ss_dssp CCEEBCCCCBCHHHHHHTTCCSSCCSCBCHHHHHHHHHHTSCCEECCBCCGGGTTCC-HHHHHHHHHSTTTBCCBBCCCS
T ss_pred CceeecccccCCCCCCCCcccCCCCCCCCHHHHHHHHHHhCCCeEEEECCccccccH-HHHHHHHHHCCCCEEEEEEeCC
Confidence 69999999965321 0 0001122333445567899977533211011111 1222222222111222223332
Q ss_pred cccCCChHHHHHHHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCc
Q psy6858 144 GITWWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAEN 205 (592)
Q Consensus 144 ~~~~~~~~~~~~~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (592)
. .. .++++++.+ .|+.++++...+.+...+.++.+..+++.|.++|+++.+|...
T Consensus 92 ~---~~---~~el~~~~~-~g~~Gi~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~~ 146 (288)
T 2ffi_A 92 D---VE---QATLAEMAR-LGVRGVRLNLMGQDMPDLTGAQWRPLLERIGEQGWHVELHRQV 146 (288)
T ss_dssp S---CC---HHHHHHHHT-TTCCEEECCCSSSCCCCTTSTTTHHHHHHHHHHTCEEEECSCT
T ss_pred C---CC---HHHHHHHHH-CCCeEEEEecccCCCCCcccHHHHHHHHHHHHCCCeEEEeech
Confidence 1 11 367777764 5999998766554334467788999999999999999999865
No 86
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=97.89 E-value=0.00022 Score=70.72 Aligned_cols=125 Identities=11% Similarity=0.169 Sum_probs=68.1
Q ss_pred ccccCcCcccccCCCCChhhHHHHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccc-cCCChH
Q psy6858 73 GIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGI-TWWSDQ 151 (592)
Q Consensus 73 ~ID~HtH~~~~~~~~~~~d~~~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 151 (592)
++|+|||+..+... .+...-...+-+.||+.++.... .... .+.+.++.... +.....+++|... ..+.++
T Consensus 13 ~~~~~~hl~~~~~~----~~~~~~l~~~~~~GV~~~v~~~~--~~~~-~~~~~~l~~~~-p~i~~~~G~hP~~~~~~~~~ 84 (268)
T 1j6o_A 13 MVDTHAHLHFHQFD----DDRNAVISSFEENNIEFVVNVGV--NLED-SKKSLDLSKTS-DRIFCSVGVHPHDAKEVPED 84 (268)
T ss_dssp EEEEEECTTSGGGT----TTHHHHHHTTTTTTEEEEEEECS--SHHH-HHHHHHHHTTC-TTEEEEECCCGGGGGGCCTT
T ss_pred ccccccCCCChhhc----cCHHHHHHHHHHcCCCEEEEeCC--CHHH-HHHHHHHHHHC-CCEEEEEeeccccccccCHH
Confidence 58999999765432 23434455666789988875532 1111 12222222221 2344556666432 233344
Q ss_pred HHHHHHHHHHHcCCcEEE-EEEeeCC---CcCCCHHHHHHHHHHHHHcCCeEEEecCc
Q psy6858 152 VQQEMAELCEKHGVNSFK-TFMAYKG---LYMLSDGELYDAFSAIKNLGAIAMVHAEN 205 (592)
Q Consensus 152 ~~~~~~~lv~~~Gv~~~k-~~~~~~~---~~~~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (592)
..++++++++...+..+. +.+.+.. .....++.|...++.|.++|+++.+|+..
T Consensus 85 ~~~~l~~~~~~~~~~~iGe~Gld~~~~~~~~~~q~~~f~~~~~~a~~~~lPv~iH~~~ 142 (268)
T 1j6o_A 85 FIEHLEKFAKDEKVVAIGETGLDFFRNISPAEVQKRVFVEQIELAGKLNLPLVVHIRD 142 (268)
T ss_dssp HHHHHHHHTTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEES
T ss_pred HHHHHHHHhccCCEEEEEccccCCcccCCChHHHHHHHHHHHHHHHHhCCCEEEEeCc
Confidence 567777776432222222 1122211 11234456889999999999999999764
No 87
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=97.87 E-value=0.00041 Score=70.56 Aligned_cols=55 Identities=9% Similarity=0.041 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHcCCcEEEEEEeeCC-----CcCCCHHHHHHHHHHHHHcCCeEEEecCc
Q psy6858 151 QVQQEMAELCEKHGVNSFKTFMAYKG-----LYMLSDGELYDAFSAIKNLGAIAMVHAEN 205 (592)
Q Consensus 151 ~~~~~~~~lv~~~Gv~~~k~~~~~~~-----~~~~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (592)
...+++++++++.|+.++++...+.. ...+.++.+..+++.|.++|+++.+|...
T Consensus 108 ~~~~el~~~~~~~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~~ 167 (327)
T 2dvt_A 108 AATEELQRCVNDLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDVPFYLHPRN 167 (327)
T ss_dssp HHHHHHHHHHHTTCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHHTCCEEEECCC
T ss_pred HHHHHHHHHHhcCCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHcCCeEEECCCC
Confidence 46788999887779999987665531 23467788999999999999999999754
No 88
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=97.77 E-value=0.001 Score=68.71 Aligned_cols=131 Identities=16% Similarity=0.198 Sum_probs=71.7
Q ss_pred CccccCcCcccccC--------CCCChhhHH----HHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeee
Q psy6858 72 GGIDPHTHFELELM--------GATSVDDFY----HGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDY 139 (592)
Q Consensus 72 G~ID~HtH~~~~~~--------~~~~~d~~~----~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 139 (592)
|+.++|-|+...+. .....++.. ...+.+.+.|+.||+|......+-. ...+++..+.......+.-
T Consensus 52 G~tl~HEHl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~k~~Gg~tIVd~T~~g~GRd-~~~l~~is~~tGv~IV~~T 130 (360)
T 3tn4_A 52 GKTLIHEHFLFGYPGFQGDVTRGTFREDESLRVAVEAAEKMKRHGIQTVVDPTPNDCGRN-PAFLRRVAEETGLNIICAT 130 (360)
T ss_dssp CSEESSCEEEECCTTGGGGTTTSCCCHHHHHHHHHHHHHHHHHTTCCEEEECCCTTTTCC-HHHHHHHHHHHCCEEEEEE
T ss_pred CCceeccCeeecChhhhcccccchhhhhhHHHHHHHHHHHHHhcCCCeEEECCCCCcCcC-HHHHHHHHHHcCCCEEEeC
Confidence 78999999843221 112222221 2233455789999999865555433 4455555555554556666
Q ss_pred eccccccCCCh---------HHHHHHHHHH-HH--cCCc-------EEEEEEeeCCCcCCCHHH---HHHHHHHHHHcCC
Q psy6858 140 ALHVGITWWSD---------QVQQEMAELC-EK--HGVN-------SFKTFMAYKGLYMLSDGE---LYDAFSAIKNLGA 197 (592)
Q Consensus 140 ~~~~~~~~~~~---------~~~~~~~~lv-~~--~Gv~-------~~k~~~~~~~~~~~~~~~---l~~~~~~a~~~g~ 197 (592)
|++........ ...+++.+++ ++ .|+. -+|....+ ..+++.| |++..+.+++.|+
T Consensus 131 G~y~~~~~~p~~~~~~~~~~~~~e~l~~~~i~Ei~~Gi~~tgikaG~I~~~~~~---~~~t~~E~k~frA~a~aa~etG~ 207 (360)
T 3tn4_A 131 GYYYEGEGAPPYFQFRRLLGTAEDDIYDMFMAELTEGIADTGIKAGVIKLASSK---GRITEYEKMFFRAAARAQKETGA 207 (360)
T ss_dssp CCCCGGGSCTHHHHHHHHHTCHHHHHHHHHHHHHHTCSTTSCCCCSEEEEECBT---TBCCHHHHHHHHHHHHHHHHHCC
T ss_pred ccccCcccCCcccchhhhcccCHHHHHHHHHHHHHhccccCCCcceEEEEEccC---CCCCHHHHHHHHHHHHHHHHhCC
Confidence 66654321111 1123444432 22 2432 23433222 2345544 8888899999999
Q ss_pred eEEEecCch
Q psy6858 198 IAMVHAENG 206 (592)
Q Consensus 198 ~~~vHae~~ 206 (592)
++.+|...+
T Consensus 208 Pv~iHt~~~ 216 (360)
T 3tn4_A 208 VIITHTQEG 216 (360)
T ss_dssp EEEEECSTT
T ss_pred cEEEEcCcc
Confidence 999998754
No 89
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=97.67 E-value=0.00056 Score=67.76 Aligned_cols=52 Identities=12% Similarity=0.016 Sum_probs=39.8
Q ss_pred hHHHHHHHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc-CCeEEEecCc
Q psy6858 150 DQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL-GAIAMVHAEN 205 (592)
Q Consensus 150 ~~~~~~~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~~~vHae~ 205 (592)
+...+++++++++.|+.+++.+.... . .++.+..+++.|.++ |+++.+|+..
T Consensus 101 ~~~~~el~~~~~~~g~~gi~~~g~~~---~-~~~~~~~~~~~a~~~~~lpv~iH~~~ 153 (272)
T 3cjp_A 101 NDTNSYIEENIVNNKLVGIGELTPAS---G-QIKSLKPIFKYSMDSGSLPIWIHAFN 153 (272)
T ss_dssp HHHHHHHHHHTTTTTCSEEEEECCCT---T-CGGGGHHHHHHHHHTTCCCEEECCST
T ss_pred HHHHHHHHHHHHhcCceEEEecCCCC---C-ccHHHHHHHHHHHhccCCcEEEeCCC
Confidence 35567888877667888887653221 2 567899999999999 9999999864
No 90
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=97.50 E-value=0.0021 Score=64.52 Aligned_cols=55 Identities=13% Similarity=0.208 Sum_probs=44.7
Q ss_pred hHHHHHHHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCc
Q psy6858 150 DQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAEN 205 (592)
Q Consensus 150 ~~~~~~~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (592)
+...+++++++++.|+.++++...+.+. .+.++.+..+++.|.++|+++.+|...
T Consensus 103 ~~~~~el~~~~~~~g~~gi~~~~~~~~~-~~~~~~~~~~~~~a~~~~lpv~iH~~~ 157 (307)
T 2f6k_A 103 LDAVKTVQQALDQDGALGVTVPTNSRGL-YFGSPVLERVYQELDARQAIVALHPNE 157 (307)
T ss_dssp HHHHHHHHHHHHTSCCSEEEEESEETTE-ETTCGGGHHHHHHHHTTTCEEEEECCC
T ss_pred HHHHHHHHHHHhccCCcEEEEeccCCCC-CCCcHhHHHHHHHHHHcCCeEEECCCC
Confidence 4567888888877799999887766443 356778999999999999999999864
No 91
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=97.40 E-value=0.0029 Score=63.90 Aligned_cols=75 Identities=12% Similarity=0.184 Sum_probs=53.0
Q ss_pred HHHHHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCc
Q psy6858 153 QQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRP 232 (592)
Q Consensus 153 ~~~~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p 232 (592)
.++++++.+ .|+.+++....+.....+.++.+..+++.+.+ |+.+.+|.....+
T Consensus 109 ~~eL~~l~~-~G~rGvR~~~~~~~~~~~~~~~~~~~~~~l~~-gl~v~l~~~~~~l------------------------ 162 (303)
T 4d9a_A 109 EAELAALHE-GGMRGIRFNFLKRLVDDAPKDKFLEVAGRLPA-GWHVVIYFEADIL------------------------ 162 (303)
T ss_dssp HHHHHHHHH-TTEEEEEEECCTTTCSCCCHHHHHHHHTSCCT-TCEEEEECCGGGH------------------------
T ss_pred HHHHHHHHH-CCCCEEEeecccCCccccCHHHHHHHHHHHhc-CCEEEEecccccH------------------------
Confidence 356777654 59999987665431234788999999999999 9999999764221
Q ss_pred HHHHHHHHHHHHHHhcccCCCEEEEeccc
Q psy6858 233 EEVEAEAVTRACTIANQVDCPLYVVHIMS 261 (592)
Q Consensus 233 ~~~e~eav~~~i~la~~~~~pl~i~hv~s 261 (592)
.....++.+.++++.+-|...
T Consensus 163 --------~~l~~~~~~~~~~iVidH~G~ 183 (303)
T 4d9a_A 163 --------EELRPFMDAIPVPIVIDHMGR 183 (303)
T ss_dssp --------HHHHHHHHHCSSCEEEGGGGC
T ss_pred --------HHHHHHHHHCCCcEEEeCCCC
Confidence 113335555589999999884
No 92
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=97.20 E-value=0.0011 Score=68.98 Aligned_cols=144 Identities=13% Similarity=0.045 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCc-HHHHHHHHHHHHHHhcccCCCEEEEecc
Q psy6858 182 DGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRP-EEVEAEAVTRACTIANQVDCPLYVVHIM 260 (592)
Q Consensus 182 ~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p-~~~e~eav~~~i~la~~~~~pl~i~hv~ 260 (592)
.+.+.++++.|+++|+++.+|+..... | .| .. +..++.+ .+.. .+.|..
T Consensus 214 ~~~~~~~~~~A~~~gl~~~~HagE~~~-----------~----------~~~~~-----i~~al~~---lg~~-ri~Hgv 263 (371)
T 2pgf_A 214 LKEYKEIFDYVRESGVPLSVHAGEDVT-----------L----------PNLNT-----LYSAIQV---LKVE-RIGHGI 263 (371)
T ss_dssp GGGGHHHHHHHHHTTCCBEEEESCCTT-----------S----------SSSHH-----HHHHHHT---SCCS-EEEECG
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCCCC-----------C----------CchHH-----HHHHHhc---cCCC-EEecch
Confidence 778999999999999999999854310 0 11 11 1223221 1322 456665
Q ss_pred cHH-HHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHhcCCceEEe
Q psy6858 261 SKA-AGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLNENALQTTG 339 (592)
Q Consensus 261 s~~-a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~G~~~~~g 339 (592)
.-. ..++++.++++ |+ .+ +.|+.+-...+.. . .+ ..+| +.++++.|+++++|
T Consensus 264 ~l~~~~~l~~~l~~~----~i--~v--~~cP~SN~~l~~~--~------~~-~~~p----------i~~ll~~Gv~V~lg 316 (371)
T 2pgf_A 264 RVAESQELIDMVKEK----NI--LL--EVCPISNVLLKNA--K------SM-DTHP----------IRQLYDAGVKVSVN 316 (371)
T ss_dssp GGGGCHHHHHHHHHT----TC--EE--EECHHHHHHTTSS--S------CG-GGCT----------HHHHHHTTCEEEEC
T ss_pred hccccHHHHHHHHHc----CC--eE--EECcchhHHhCCC--C------cc-ccCh----------HHHHHHCCCeEEEe
Confidence 332 22346666666 66 33 3343221110100 0 00 1122 34799999999999
Q ss_pred CCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCC
Q psy6858 340 SDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLY 404 (592)
Q Consensus 340 sD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~ 404 (592)
||...++.. .+. -|.++. . ...++++.++ ..+|.|++++..+.
T Consensus 317 TD~~~~~~~-~l~--------------~e~~~a--~----~~~~l~~~~l-~~lt~ns~~asf~~ 359 (371)
T 2pgf_A 317 SDDPGMFLT-NIN--------------DDYEEL--Y----THLNFTLEDF-MKMNEWALEKSFMD 359 (371)
T ss_dssp CBCHHHHTC-CHH--------------HHHHHH--H----HHHCCCHHHH-HHHHHHHHHHCCSC
T ss_pred CCCCcccCC-CHH--------------HHHHHH--H----HHhCCCHHHH-HHHHHHHHHHHcCC
Confidence 997542211 100 022222 2 2236899996 77789999998874
No 93
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=97.17 E-value=0.015 Score=59.73 Aligned_cols=157 Identities=13% Similarity=0.009 Sum_probs=86.2
Q ss_pred cCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHH
Q psy6858 163 HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTR 242 (592)
Q Consensus 163 ~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~ 242 (592)
.++.+|.+.-.. ...+.+.+.++++.|++.|+++.+|+..... | +.+..
T Consensus 163 ~~vvG~dL~g~E---~~~~~~~~~~~~~~A~~~gl~~~~HagE~~~-----------------------~-----~~i~~ 211 (343)
T 3rys_A 163 APIAGIGLDSAE---VGNPPSKFERLYQRAAEAGLRRIAHAGEEGP-----------------------A-----SYITE 211 (343)
T ss_dssp CCCCEEEEESCC---TTCCGGGGHHHHHHHHHTTCEEEEEESSSSC-----------------------H-----HHHHH
T ss_pred CCEEEEecCCcc---cCCCHHHHHHHHHHHHHCCCeEEEeeCCCCC-----------------------H-----HHHHH
Confidence 356666654322 2346678999999999999999999854210 1 12222
Q ss_pred HHHHhcccCCCEEEEecccHH-HHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCcccccccceecCCCCCCCC
Q psy6858 243 ACTIANQVDCPLYVVHIMSKA-AGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDET 321 (592)
Q Consensus 243 ~i~la~~~~~pl~i~hv~s~~-a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~ 321 (592)
++.+. +. -.+.|...-. ..+.++.++++ |+ .+ |.|+.+-...+. . . .+ ...|
T Consensus 212 al~~l---g~-~rIgHgv~l~~d~~l~~~l~~~----~i--~l--e~cP~SN~~l~~-~-~------~~-~~hP------ 264 (343)
T 3rys_A 212 ALDVL---HV-ERIDHGIRCMEDTDVVQRLVAE----QV--PL--TVCPLSNVRLRA-V-D------KL-ADHP------ 264 (343)
T ss_dssp HHHTS---CC-SEEEECGGGGGCHHHHHHHHHH----TC--CE--EECHHHHHHTTS-S-S------CG-GGCS------
T ss_pred HHhcC---Cc-ceeeeeeeecCChHHHHHHHhc----CC--Ce--eEchhHHHHhCC-C-C------Cc-ccch------
Confidence 33311 21 1355654332 23556667777 66 32 344322111111 0 0 00 0122
Q ss_pred CHHHHHHHHhcCCceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHc
Q psy6858 322 TPTHLLTLLNENALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIF 401 (592)
Q Consensus 322 ~~~~l~~~l~~G~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~l 401 (592)
+..+++.|++++++||+..++.. . +..-|.. ++..-++++.++ +..+.|+++.-
T Consensus 265 ----i~~ll~~Gv~V~l~TDdp~~~~~-~----------------l~~E~~~----a~~~~~l~~~~l-~~l~~nsi~~s 318 (343)
T 3rys_A 265 ----LPEMLAIGLNVCVNSDDPAYFGG-Y----------------VDDNFEQ----LVKVLEFSVPEQ-ATLAANSIRSS 318 (343)
T ss_dssp ----HHHHHHTTCCEEECCBSTTTTTC-C----------------HHHHHHH----HHHHHCCCHHHH-HHHHHHHHHHS
T ss_pred ----HHHHHHCCCeEEEeCCCccccCC-C----------------HHHHHHH----HHHHcCCCHHHH-HHHHHHHHHHH
Confidence 44799999999999998765422 1 1111222 222236899995 55678999887
Q ss_pred CC
Q psy6858 402 NL 403 (592)
Q Consensus 402 gl 403 (592)
-+
T Consensus 319 f~ 320 (343)
T 3rys_A 319 FA 320 (343)
T ss_dssp SS
T ss_pred CC
Confidence 66
No 94
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=97.03 E-value=0.0079 Score=60.96 Aligned_cols=54 Identities=11% Similarity=0.141 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCc
Q psy6858 151 QVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAEN 205 (592)
Q Consensus 151 ~~~~~~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (592)
...+++++++++.|..+++++..+.+ ..+.++.+..+++.|.++|+++.+|...
T Consensus 111 ~a~~el~r~~~~~G~~Gv~l~~~~~~-~~l~d~~~~p~~~~~~e~g~pv~iH~g~ 164 (312)
T 3ij6_A 111 SACKVISSIKDDENLVGAQIFTRHLG-KSIADKEFRPVLAQAAKLHVPLWMHPVF 164 (312)
T ss_dssp HHHHHHHHHHHCTTEEEEEEESEETT-EETTSTTTHHHHHHHHHTTCCEEEECCC
T ss_pred HHHHHHHHHHHhCCCceEeccCCCCC-CCCCCccHHHHHHHHHHcCCeEEEcCCC
Confidence 46789999987779999988765544 4467889999999999999999999754
No 95
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=96.96 E-value=0.0049 Score=62.82 Aligned_cols=39 Identities=10% Similarity=0.077 Sum_probs=29.1
Q ss_pred CCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCc
Q psy6858 164 GVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAEN 205 (592)
Q Consensus 164 Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (592)
++.+|.+.-.. ...+.+.+.++++.|++.|+++.+|+..
T Consensus 161 ~vvG~dL~g~E---~~~~~~~~~~~~~~A~~~gl~~~~HagE 199 (326)
T 3pao_A 161 AFIAVGLDSSE---VGHPPSKFQRVFDRARSEGFLTVAHAGE 199 (326)
T ss_dssp GCSEEEEESCC---TTCCGGGGHHHHHHHHHTTCEECEEESS
T ss_pred cceeeCCCCCC---CCCCHHHHHHHHHHHHHcCCceeeecCC
Confidence 56666654322 2346678999999999999999999854
No 96
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=96.87 E-value=0.0022 Score=63.29 Aligned_cols=118 Identities=13% Similarity=0.068 Sum_probs=62.7
Q ss_pred ccccCcCcccccCCCCChhhHHHHHHHHHcCCeeEEeccccCC-CCcc---HHHHHHHHHH----Hhc---cCceeeeec
Q psy6858 73 GIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTIIDFALPR-KGES---LIKTYESWRQ----KAD---EKVCCDYAL 141 (592)
Q Consensus 73 ~ID~HtH~~~~~~~~~~~d~~~~~~~~ala~GtTti~d~~~~~-~~~~---~~~a~~~~~~----~~~---~~~~~~~~~ 141 (592)
+||+|+|+..... ++ ...|.+.||+.++...... ...+ ..+.+..... .+. ....+.+|+
T Consensus 2 ~iDtH~Hld~~~~-----~~----l~~a~~~GV~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~v~~~~Gi 72 (261)
T 3guw_A 2 YFDSHLHSEGLGF-----SE----LVKLKENGIKEVCSLAFFPVKPKYPQTMIDVFRKLTEFEPLRCEAAGVKMHPAVGI 72 (261)
T ss_dssp CCBCCCCGGGCCH-----HH----HHHHHTTSCCEECCBCCCSSCCSSHHHHHHHHHHHHHTHHHHHHTTTCEECCBCCC
T ss_pred eEEeccCCCCCCh-----HH----HHHHHHCCCcEEEEeccCccccchhhhHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
Confidence 7999999975321 22 4567789999987543221 1111 1222322221 111 134566777
Q ss_pred ccccc-CCChHHHHHHHHHHHHcCCcEEE-EEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCc
Q psy6858 142 HVGIT-WWSDQVQQEMAELCEKHGVNSFK-TFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAEN 205 (592)
Q Consensus 142 ~~~~~-~~~~~~~~~~~~lv~~~Gv~~~k-~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (592)
|.... ...+ +..+.+.+..+..+. +.+.|. .....+-|.+.++.|+++++++.+|+..
T Consensus 73 HP~~~~~~~~----~~~~~l~~~~vvaIGEiGLD~~--~~~Q~~~f~~ql~lA~e~~lPv~iH~r~ 132 (261)
T 3guw_A 73 HPRCIPPDYE----FVLGYLEEGEWVAFGEIGLELV--TDEEIEVLKSQLELAKRMDVPCIIHTPR 132 (261)
T ss_dssp CGGGCCTTTH----HHHHHHTTSCCSCEEEEECSSC--CHHHHHHHHHHHHHHHHHTCCEEEECCS
T ss_pred CcccccccHH----HHHHHhCcCCeEEEEEecCCCC--hHHHHHHHHHHHHHHHHhCCeEEEEcCC
Confidence 76432 2222 222333333454443 333332 1112234788899999999999999875
No 97
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=96.71 E-value=0.008 Score=60.53 Aligned_cols=53 Identities=9% Similarity=0.101 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHcCCcEEEEEEeeCCC-c-CCCHHHHHHHHHHHHHcCCeEEEecCc
Q psy6858 152 VQQEMAELCEKHGVNSFKTFMAYKGL-Y-MLSDGELYDAFSAIKNLGAIAMVHAEN 205 (592)
Q Consensus 152 ~~~~~~~lv~~~Gv~~~k~~~~~~~~-~-~~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (592)
..++++++. +.|+.+++....+... . .+.++.+.+.++.|.++|+++.+|...
T Consensus 90 ~~~~L~~l~-~~gv~Gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~glpv~ih~~~ 144 (303)
T 4do7_A 90 LAERVAEWR-GTKLRGFRHQLQDEADVRAFVDDADFARGVAWLQANDYVYDVLVFE 144 (303)
T ss_dssp HHHHHTTCC-SSCEEEEECCGGGSSCHHHHHHCHHHHHHHHHHHHTTCEEEECCCG
T ss_pred HHHHHHHHh-hcCceEEEecCcCCCCccccccCHHHHHHHHHHHHCCCeEEEecCH
Confidence 566777776 6688888765432211 1 245667999999999999999999764
No 98
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=96.57 E-value=0.042 Score=57.21 Aligned_cols=134 Identities=10% Similarity=-0.005 Sum_probs=76.1
Q ss_pred eCccccCcCcccccCC------CCChhhHHHHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhcc---Cceeeeec
Q psy6858 71 PGGIDPHTHFELELMG------ATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADE---KVCCDYAL 141 (592)
Q Consensus 71 PG~ID~HtH~~~~~~~------~~~~d~~~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~ 141 (592)
+-|||+|+|+..+.+. ....+|+..-...|.+.||+.++.. +..-.+...+++....+... +.++.+|+
T Consensus 12 ~~~iDih~nL~d~~f~g~y~~~~~h~~D~~~vl~rA~~~GV~~ii~~--g~~l~~s~~~~~La~~~~~~~~~~l~~tvGv 89 (401)
T 3e2v_A 12 LKYYDIGLNLTDPMFHGIYNGKQYHPADYVKLLERAAQRHVKNALVT--GSSIAESQSAIELVSSVKDLSPLKLYHTIGV 89 (401)
T ss_dssp CCEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEEC--CCSHHHHHHHHHHHHHHTTTCSSEEEEEECC
T ss_pred CCeEEEEeCcCcHHHhhhccccccCccCHHHHHHHHHHCCCCEEEEe--cCCHHHHHHHHHHHHHCCCccccceEEEEEE
Confidence 4699999999765432 1224567777888899999998644 22222334444444443321 13667888
Q ss_pred cccc-cCCCh------------------------------------HHHHHHHHHHHH------cCCcEEE-EEEeeCCC
Q psy6858 142 HVGI-TWWSD------------------------------------QVQQEMAELCEK------HGVNSFK-TFMAYKGL 177 (592)
Q Consensus 142 ~~~~-~~~~~------------------------------------~~~~~~~~lv~~------~Gv~~~k-~~~~~~~~ 177 (592)
|... ..+.+ +..+++.+++.+ ..+..+. +.+.|...
T Consensus 90 HP~~~~e~~~~~~~~~~~~~~~~p~~d~~~~~~l~~~~~~~~~~~~~~l~~L~~l~~~~~~~~~~~vvAIGEiGLDy~~~ 169 (401)
T 3e2v_A 90 HPCCVNEFADASQGDKASASIDNPSMDEAYNESLYAKVISNPSFAQGKLKELYDLMNQQAKPHDTSFRSIGEIGLDYDRF 169 (401)
T ss_dssp CGGGGGGGC------------------CHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHCSTTCSEEEEEEEEEETTCT
T ss_pred CcChhhhcccccccccccccccccccccccccccccccccccccchHHHHHHHHHHHhhhhccCCcEEEEEEEeCCCCcC
Confidence 8642 11211 125566666543 1233333 44455321
Q ss_pred cCCCH----HHHHHHHHHHHHc----CCeEEEecCch
Q psy6858 178 YMLSD----GELYDAFSAIKNL----GAIAMVHAENG 206 (592)
Q Consensus 178 ~~~~~----~~l~~~~~~a~~~----g~~~~vHae~~ 206 (592)
...+. +-|.+.+++|+++ +.++.+|+.+.
T Consensus 170 ~~~~~e~Q~~~F~~QL~LA~e~~~~~~lPv~IH~R~A 206 (401)
T 3e2v_A 170 HYSSKEMQKVFFEEQLKISCLNDKLSSYPLFLHMRSA 206 (401)
T ss_dssp TTSCHHHHHHHHHHHHHHTTSSHHHHTSCEEEEEESC
T ss_pred CCCCHHHHHHHHHHHHHHHHhhhccCCCeEEEEecch
Confidence 11122 2366778889999 99999998653
No 99
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=96.37 E-value=0.078 Score=54.78 Aligned_cols=23 Identities=22% Similarity=0.200 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHcCCeEEEecCc
Q psy6858 183 GELYDAFSAIKNLGAIAMVHAEN 205 (592)
Q Consensus 183 ~~l~~~~~~a~~~g~~~~vHae~ 205 (592)
+.+.++++.|++.|+++.+|+..
T Consensus 192 ~~f~~~f~~A~~~gl~~~~HagE 214 (367)
T 3iar_A 192 PGHVQAYQEAVKSGIHRTVHAGE 214 (367)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESS
T ss_pred HHHHHHHHHHHHcCCeeEEecCC
Confidence 68999999999999999999854
No 100
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=96.25 E-value=0.067 Score=53.35 Aligned_cols=226 Identities=12% Similarity=0.072 Sum_probs=121.4
Q ss_pred HHHHHcCCeeEEeccccCC--CCccHHHHHHHHHHHhccCceeeeeccccccCCC-hHHHHHHHHHHHHcCCcEEEEEEe
Q psy6858 97 TKAAVAGGTTTIIDFALPR--KGESLIKTYESWRQKADEKVCCDYALHVGITWWS-DQVQQEMAELCEKHGVNSFKTFMA 173 (592)
Q Consensus 97 ~~~ala~GtTti~d~~~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~lv~~~Gv~~~k~~~~ 173 (592)
.+.+-+.||+..+-..... .+....+.+.++.+....+...-.+++. +. +...+++++ +++.|+.+++....
T Consensus 53 l~~md~~GV~~~V~~~~~~~~~~~~~N~~~~~~~~~~p~r~~~~~~v~p----~~~~~a~~eL~~-~~~~g~~Gi~~~~~ 127 (291)
T 3irs_A 53 FEEMAAAGIEQGVCVGRNSSVLGSVSNADVAAVAKAYPDKFHPVGSIEA----ATRKEAMAQMQE-ILDLGIRIVNLEPG 127 (291)
T ss_dssp HHHHHHTTCCEEEEECCEETTTEECCHHHHHHHHHHSTTTEEEEEECCC----SSHHHHHHHHHH-HHHTTCCCEEECGG
T ss_pred HHHHHHCCCCEEEEcCCCccccccccHHHHHHHHHHCCCcEEEEEecCc----cCHHHHHHHHHH-HHhCCCeEEEEeCC
Confidence 4455578998776432221 0101223333333333222332333332 22 556788888 77789999998754
Q ss_pred eCC-CcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcHHHHHHHHHHHHHHhcc-cC
Q psy6858 174 YKG-LYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPEEVEAEAVTRACTIANQ-VD 251 (592)
Q Consensus 174 ~~~-~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~~~e~eav~~~i~la~~-~~ 251 (592)
+.+ ...+.++.+..+++.|.++|+++.+|..... ++ ...++.|..+ ..++++ -+
T Consensus 128 ~~~~~~~~~d~~~~~~~~~a~e~glpv~iH~~~~~---------------~~-~~~~~~p~~~--------~~v~~~~P~ 183 (291)
T 3irs_A 128 VWATPMHVDDRRLYPLYAFCEDNGIPVIMMTGGNA---------------GP-DITYTNPEHI--------DRVLGDFPD 183 (291)
T ss_dssp GSSSCCCTTCGGGHHHHHHHHHTTCCEEEECSSSC---------------SS-SGGGGCHHHH--------HHHHHHCTT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHcCCeEEEeCCCCC---------------CC-CCccCCHHHH--------HHHHHHCCC
Confidence 431 2335778899999999999999999986531 11 1112233322 223333 47
Q ss_pred CCEEEEecccHHHHHHHHHHHHHHHhcCCceeeeeecccceeecCCCCCCCcccccccceecCCCCCCCCCHHHHHHHHh
Q psy6858 252 CPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETLAAAVGTHANQIPCTWHDQAAHVLSPPLRPDETTPTHLLTLLN 331 (592)
Q Consensus 252 ~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~~~~l~~d~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~ 331 (592)
+++.+.|.......+.++.+.+ .- .++..+.... ... + ....+.++++
T Consensus 184 l~ivl~H~G~~~~~~~~~l~~~-----~~--nvy~~~Sg~~-------------------~~~-----~-~~~~~~~~~~ 231 (291)
T 3irs_A 184 LTVVSSHGNWPWVQEIIHVAFR-----RP--NLYLSPDMYL-------------------YNL-----P-GHADFIQAAN 231 (291)
T ss_dssp CCEEEEGGGTTCHHHHHHHHHH-----CT--TEEEECGGGG-------------------SSS-----T-THHHHHHHHT
T ss_pred CEEEeecCCcccHHHHHHHHhH-----CC--CeEecHHHHh-------------------ccC-----C-CHHHHHHHHH
Confidence 8888899876544444444322 12 3443332110 000 0 1122333333
Q ss_pred c-C-CceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCCCCCCc
Q psy6858 332 E-N-ALQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNLYPKKG 408 (592)
Q Consensus 332 ~-G-~~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl~~~~G 408 (592)
. | ..+.+|||..-.. .. . .++.+.. -.++.++.-++++.|++++|++..+-|
T Consensus 232 ~~g~drllfgSD~P~~~-~~-------------------~----~~~~~~~-l~l~~e~~~~i~~~NA~rl~~~~~~~~ 285 (291)
T 3irs_A 232 SFLADRMLFGTAYPMCP-LK-------------------E----YTEWFLT-LPIKPDAMEKILHGNAERLLAQAGREG 285 (291)
T ss_dssp TGGGGTBCCCCCBTSSC-HH-------------------H----HHHHHHT-SSCCHHHHHHHHTHHHHHHHHHSCC--
T ss_pred HhCcceEEEecCCCCCC-HH-------------------H----HHHHHHH-CCCCHHHHHHHHHHHHHHHhCcccccc
Confidence 2 2 3577888863222 11 1 1111222 278999999999999999999976655
No 101
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=94.58 E-value=0.11 Score=52.84 Aligned_cols=54 Identities=19% Similarity=0.255 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCc
Q psy6858 151 QVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAEN 205 (592)
Q Consensus 151 ~~~~~~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (592)
...+++++++++.|+.++++...+.+ ..+.++.+..+++.|.++|+++.+|...
T Consensus 124 ~a~~el~~~~~~~g~~Gv~l~~~~~~-~~l~d~~~~~~~~~~~e~~lpv~iH~~~ 177 (336)
T 2wm1_A 124 LAVKEMERCVKELGFPGVQIGTHVNE-WDLNAQELFPVYAAAERLKCSLFVHPWD 177 (336)
T ss_dssp HHHHHHHHHHHTSCCSEEEEESEETT-EETTCGGGHHHHHHHHHHTCEEEEECCS
T ss_pred HHHHHHHHHHHccCCeEEEECCcCCC-CCCCCccHHHHHHHHHHcCCEEEECCCC
Confidence 56788999887789999987665544 3467788999999999999999999864
No 102
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=93.71 E-value=0.21 Score=50.60 Aligned_cols=54 Identities=17% Similarity=0.068 Sum_probs=43.9
Q ss_pred hHHHHHHHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCc
Q psy6858 150 DQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAEN 205 (592)
Q Consensus 150 ~~~~~~~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (592)
+...+++++++ +.|+.++++...+.+ ..++++.+..+++.|.++|+++.+|+..
T Consensus 127 ~~a~~el~~~~-~~g~~Gv~l~~~~~~-~~l~d~~~~p~~~~~~e~~lpv~iH~~~ 180 (334)
T 2hbv_A 127 DLACKEASRAV-AAGHLGIQIGNHLGD-KDLDDATLEAFLTHCANEDIPILVHPWD 180 (334)
T ss_dssp HHHHHHHHHHH-HHTCCCEEEESCBTT-BCTTSHHHHHHHHHHHHTTCCEEEECCS
T ss_pred HHHHHHHHHHH-HcCCeEEEECCCCCC-CCCCcHHHHHHHHHHHHCCCEEEECCCC
Confidence 35678899888 679999887665544 3467899999999999999999999864
No 103
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=93.24 E-value=0.27 Score=50.53 Aligned_cols=56 Identities=13% Similarity=0.118 Sum_probs=45.3
Q ss_pred hHHHHHHHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCch
Q psy6858 150 DQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENG 206 (592)
Q Consensus 150 ~~~~~~~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~ 206 (592)
+...+++++++++.|+.++++...+.+ ..++++.+..+++.|.++|+++.+|....
T Consensus 141 ~~a~~El~r~~~~~G~~Gv~l~~~~~~-~~~~d~~~~p~~~~~~e~g~pV~iH~g~~ 196 (357)
T 3nur_A 141 EAAAREFERCINDLGFKGALIMGRAQD-GFLDQDKYDIIFKTAENLDVPIYLHPAPV 196 (357)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEESCBTT-BCTTSGGGHHHHHHHHHHTCCEEEECCCC
T ss_pred HHHHHHHHHHHhhcCceEEEeCCCCCC-CCCCCccHHHHHHHHHhcCCeEEEecCCC
Confidence 346789999888889999998754433 34678899999999999999999998653
No 104
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=92.72 E-value=0.48 Score=48.29 Aligned_cols=57 Identities=18% Similarity=0.215 Sum_probs=44.6
Q ss_pred hHHHHHHHHHHHHcCCcEEEEEEeeCC----CcCCCHHHHHHHHHHHHHcCCeEEEecCch
Q psy6858 150 DQVQQEMAELCEKHGVNSFKTFMAYKG----LYMLSDGELYDAFSAIKNLGAIAMVHAENG 206 (592)
Q Consensus 150 ~~~~~~~~~lv~~~Gv~~~k~~~~~~~----~~~~~~~~l~~~~~~a~~~g~~~~vHae~~ 206 (592)
+...+++++++++.|+.++++...+.+ ...+.++.+..+++.|.++|+++.+|....
T Consensus 122 ~~a~~eL~r~~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~~lpv~iH~~~~ 182 (350)
T 2gwg_A 122 KTCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVELEIPAMIHVSTS 182 (350)
T ss_dssp GGGHHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHHTCCEEECCCC-
T ss_pred HHHHHHHHHHHhccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHcCCeEEECCCCC
Confidence 566789999987789999987554322 124678889999999999999999998653
No 105
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=92.71 E-value=0.49 Score=48.96 Aligned_cols=55 Identities=9% Similarity=0.060 Sum_probs=34.6
Q ss_pred CChHHHHHHHHHHHH---cCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCc
Q psy6858 148 WSDQVQQEMAELCEK---HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAEN 205 (592)
Q Consensus 148 ~~~~~~~~~~~lv~~---~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (592)
.+.+...++-+++.. .++.+|.+.-... ......+.++|+.|++.|+++++||..
T Consensus 162 ~~~e~a~~~~~~a~~~~~~~VvG~dL~g~E~---~~p~~~f~~~f~~ar~~Gl~~t~HAGE 219 (380)
T 4gxw_A 162 QDPDEAVAIVDWMKANRADEVAGIGIDYREN---DRPPELFWKAYRDARAAGFRTTAHAGE 219 (380)
T ss_dssp SCHHHHHHHHHHHHHTCCTTBCEEEEESCCT---TCCGGGGHHHHHHHHHTTCEEEEEESC
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEeecCCCC---CCCHHHHHHHHHHHHHcCCCeeeeccc
Confidence 334433444444433 3566665542221 235567899999999999999999854
No 106
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=88.11 E-value=3.6 Score=39.44 Aligned_cols=128 Identities=18% Similarity=0.212 Sum_probs=65.5
Q ss_pred eCccccCcCccccc-CCCCChhhHHHHHHHHHcCCeeEEe--ccccCC-CC---ccHHHHHHHHHHHh---ccCceeeee
Q psy6858 71 PGGIDPHTHFELEL-MGATSVDDFYHGTKAAVAGGTTTII--DFALPR-KG---ESLIKTYESWRQKA---DEKVCCDYA 140 (592)
Q Consensus 71 PG~ID~HtH~~~~~-~~~~~~d~~~~~~~~ala~GtTti~--d~~~~~-~~---~~~~~a~~~~~~~~---~~~~~~~~~ 140 (592)
.|+||.|+|..... .+..+.++.....+.|.+.|++.|. ||.... .. +.+...+..++... ..+..+..|
T Consensus 3 ~~m~D~H~Ht~~~~ddg~~~~e~~~e~i~~A~~~Gi~~i~~TdH~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~G 82 (247)
T 2wje_A 3 MGMIDIHSHIVFDVDDGPKSREESKALLAESYRQGVRTIVSTSHRRKGMFETPEEKIAENFLQVREIAKEVASDLVIAYG 82 (247)
T ss_dssp -CEEECCBCCSTTSSSSCSSHHHHHHHHHHHHHTTEEEEECCCEEBTTTBCCCHHHHHHHHHHHHHHHHHHCTTCEEECC
T ss_pred CCCEEEecccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 46899999994432 4455667767789999999999885 343211 11 22334455544322 123334444
Q ss_pred ccccccCCChHHHHHHHH--HHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcC-CeEEEecCc
Q psy6858 141 LHVGITWWSDQVQQEMAE--LCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLG-AIAMVHAEN 205 (592)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~--lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g-~~~~vHae~ 205 (592)
..+.+. +...+.+++ +..-.|...+.+ .+. .......+.+++..+.+.| ..+..|++.
T Consensus 83 ~E~~~~---~~~~~~l~~~~~~~l~gs~~vl~--e~~--~~~~~~~~~~~i~~i~~~g~~~vlaHp~r 143 (247)
T 2wje_A 83 AEIYYT---PDVLDKLEKKRIPTLNDSRYALI--EFS--MNTPYRDIHSALSKILMLGITPVIAHIER 143 (247)
T ss_dssp CEEECC---THHHHHHHTTCSCCGGGSSEEEE--ECC--TTCCHHHHHHHHHHHHTTTCEEEETTGGG
T ss_pred eEEeec---HHHHHHHhcCCccEECCCeEEEE--eCC--CCcchHHHHHHHHHHHHCCCcEEEEehhh
Confidence 443332 233333322 000012222211 111 1224456777777777776 567778754
No 107
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=77.92 E-value=46 Score=31.57 Aligned_cols=118 Identities=16% Similarity=0.061 Sum_probs=70.0
Q ss_pred HHHHHHHHHHcCCcEEEEEEeeCC---CcCCCHHHHHHHHHHHHHcCC-eEEEecCchhhhHHHHHHHHHcCCCCCCCcc
Q psy6858 153 QQEMAELCEKHGVNSFKTFMAYKG---LYMLSDGELYDAFSAIKNLGA-IAMVHAENGEIIDKNTQKLLAAGIKGPEGHQ 228 (592)
Q Consensus 153 ~~~~~~lv~~~Gv~~~k~~~~~~~---~~~~~~~~l~~~~~~a~~~g~-~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~ 228 (592)
.++.-+.+++.|...+.++..... ...++++++.++.+.+++.|+ .+.+|+...- .+. .
T Consensus 16 ~~~~~~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~h~~~~~------------~l~----s- 78 (270)
T 3aam_A 16 VAGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREASGGLPAVIHASYLV------------NLG----A- 78 (270)
T ss_dssp HHHHHHHHHHHTCSCEEEESSCTTCCSCCCCCHHHHHHHHHHHHHTTCCCEEEECCTTC------------CTT----C-
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCceEEEecCccc------------CCC----C-
Confidence 344444455679999888653211 123567889999999999999 8889964210 000 0
Q ss_pred CCCcHHHHHHHHHHHHHHhcccCCCEEEEecccH---HHHHHHHHHHHHHH-hcCCceeeeeecc
Q psy6858 229 LSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSK---AAGDAMAYKRKELM-KKGKHCTLYGETL 289 (592)
Q Consensus 229 ~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~---~a~~~i~~ar~~~~-~~G~~~~v~~e~~ 289 (592)
...-.+...+.+.+.+.+|...|++..++|.... ...+.++.+-+..- ++|+ .+..|+.
T Consensus 79 ~~~~r~~~~~~~~~~i~~a~~lGa~~vv~h~g~~~~~~~~~~l~~l~~~a~~~~gv--~l~lEn~ 141 (270)
T 3aam_A 79 EGELWEKSVASLADDLEKAALLGVEYVVVHPGSGRPERVKEGALKALRLAGVRSRP--VLLVENT 141 (270)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHTCCEEEECCCBSCHHHHHHHHHHHHHHHTCCSSS--EEEEECC
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHhhcccCCC--EEEEecC
Confidence 0011122346778899999999999998887752 22333333222211 2377 6666655
No 108
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=73.93 E-value=10 Score=36.74 Aligned_cols=126 Identities=17% Similarity=0.120 Sum_probs=64.8
Q ss_pred ccccCcCcccc-cCCCCChhhHHHHHHHHHcCCeeEEe--ccccC----CCCccHHHHHHHHHHHhc---cCceeeeecc
Q psy6858 73 GIDPHTHFELE-LMGATSVDDFYHGTKAAVAGGTTTII--DFALP----RKGESLIKTYESWRQKAD---EKVCCDYALH 142 (592)
Q Consensus 73 ~ID~HtH~~~~-~~~~~~~d~~~~~~~~ala~GtTti~--d~~~~----~~~~~~~~a~~~~~~~~~---~~~~~~~~~~ 142 (592)
+||.|+|.... ..+..+.++.....++|.+.|++.|. ||... ...+.+.+.+++.+.... ....+..|..
T Consensus 1 m~D~H~H~~~~~ddG~~~~~~sl~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~i~I~~G~E 80 (262)
T 3qy7_A 1 MIDIHCHILPAMDDGAGDSADSIEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIKEDIPLHVLPGQE 80 (262)
T ss_dssp CEESSBCCSTTSSSSCSSHHHHHHHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHHHHHHHHHHTTCCCEEECCCE
T ss_pred CEEEeecCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEecCeE
Confidence 58999999643 23456666655678999999999985 33221 112245555555555432 2223334444
Q ss_pred ccccCCChHHHHHHHHH--HHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcC-CeEEEecCc
Q psy6858 143 VGITWWSDQVQQEMAEL--CEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLG-AIAMVHAEN 205 (592)
Q Consensus 143 ~~~~~~~~~~~~~~~~l--v~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g-~~~~vHae~ 205 (592)
+.+. +...+.+++- ..-.|...+-+-+. .......+.+.+..+.+.| .++..|++.
T Consensus 81 v~~~---~~~~~~l~~~~~~~l~~~~~vl~e~~----~~~~~~~~~~~l~~i~~~g~v~ILAHPeR 139 (262)
T 3qy7_A 81 IRIY---GEVEQDLAKRQLLSLNDTKYILIEFP----FDHVPRYAEQLFYDLQLKGYIPVIAHPER 139 (262)
T ss_dssp EECC---TTHHHHHHTTCSCCGGGSSEEEEECC----TTCCCTTHHHHHHHHHHTTCEEEEECGGG
T ss_pred Eecc---hhHHHHHhcCCCcEECCceEEEEeCC----CccCHHHHHHHHHHHHHCCCcEEEECCCc
Confidence 3332 2233333321 00012222222111 1223345667766666665 668899874
No 109
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=71.13 E-value=25 Score=33.28 Aligned_cols=103 Identities=9% Similarity=-0.115 Sum_probs=67.8
Q ss_pred HHHHHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCc
Q psy6858 153 QQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRP 232 (592)
Q Consensus 153 ~~~~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p 232 (592)
.++.-+.+++.|...+.++.. +-....+++++.++.+.+++.|+.+..+.....
T Consensus 32 ~~~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~------------------------- 85 (257)
T 3lmz_A 32 LDTTLKTLERLDIHYLCIKDF-HLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYM------------------------- 85 (257)
T ss_dssp HHHHHHHHHHTTCCEEEECTT-TSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEE-------------------------
T ss_pred HHHHHHHHHHhCCCEEEEecc-cCCCCCCHHHHHHHHHHHHHcCCeEEEEecccc-------------------------
Confidence 445555566779988876643 112345788889999999999998776643211
Q ss_pred HHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCceeeeeecc
Q psy6858 233 EEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETL 289 (592)
Q Consensus 233 ~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~ 289 (592)
. ..+.+.+.+++|+..|++..++|.....-.++.+.+++. |+ .+..|..
T Consensus 86 ~--~~~~~~~~i~~A~~lGa~~v~~~p~~~~l~~l~~~a~~~----gv--~l~lEn~ 134 (257)
T 3lmz_A 86 K--SEEEIDRAFDYAKRVGVKLIVGVPNYELLPYVDKKVKEY----DF--HYAIHLH 134 (257)
T ss_dssp C--SHHHHHHHHHHHHHHTCSEEEEEECGGGHHHHHHHHHHH----TC--EEEEECC
T ss_pred C--CHHHHHHHHHHHHHhCCCEEEecCCHHHHHHHHHHHHHc----CC--EEEEecC
Confidence 0 125567788999999999888886543333444555556 98 6666654
No 110
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=67.38 E-value=37 Score=32.09 Aligned_cols=104 Identities=7% Similarity=-0.019 Sum_probs=67.8
Q ss_pred HHHHHHHHHHcCCcEEEEEEeeC------C---CcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCC
Q psy6858 153 QQEMAELCEKHGVNSFKTFMAYK------G---LYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKG 223 (592)
Q Consensus 153 ~~~~~~lv~~~Gv~~~k~~~~~~------~---~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~ 223 (592)
.++.-+.+++.|...+.++.... + ....+++.+.++.+.+++.|+.+..+.....
T Consensus 24 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~---------------- 87 (262)
T 3p6l_A 24 LTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVYVA---------------- 87 (262)
T ss_dssp HHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEECC----------------
T ss_pred HHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccCC----------------
Confidence 34444555667998888764310 1 2346788899999999999998877743211
Q ss_pred CCCccCCCcHHHHHHHHHHHHHHhcccCCCEEEEecccHHHHHHHHHHHHHHHhcCCceeeeeecc
Q psy6858 224 PEGHQLSRPEEVEAEAVTRACTIANQVDCPLYVVHIMSKAAGDAMAYKRKELMKKGKHCTLYGETL 289 (592)
Q Consensus 224 p~~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~hv~s~~a~~~i~~ar~~~~~~G~~~~v~~e~~ 289 (592)
. . .+.+.+.+++|+..|++..++|.....-.++.+.+++. |+ .+..|+.
T Consensus 88 -----~-~-----~~~~~~~i~~A~~lGa~~v~~~~~~~~~~~l~~~a~~~----gv--~l~~En~ 136 (262)
T 3p6l_A 88 -----E-K-----SSDWEKMFKFAKAMDLEFITCEPALSDWDLVEKLSKQY----NI--KISVHNH 136 (262)
T ss_dssp -----S-S-----TTHHHHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHH----TC--EEEEECC
T ss_pred -----c-c-----HHHHHHHHHHHHHcCCCEEEecCCHHHHHHHHHHHHHh----CC--EEEEEeC
Confidence 0 0 13456788899999999888886543333444555556 98 7766765
No 111
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=66.21 E-value=7.8 Score=39.74 Aligned_cols=55 Identities=13% Similarity=0.167 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCch
Q psy6858 151 QVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENG 206 (592)
Q Consensus 151 ~~~~~~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~ 206 (592)
...+++++++++.|+.++++...+.+ ..+++..+..+++.|.++|+++.+|....
T Consensus 160 ~a~~EL~r~~~~~G~~Gv~l~~~~~g-~~l~d~~~~pi~~~~~e~g~pV~iH~g~~ 214 (373)
T 4inf_A 160 WSAREIHRGARELGFKGIQINSHTQG-RYLDEEFFDPIFRALVEVDQPLYIHPATS 214 (373)
T ss_dssp HHHHHHHHHHHTSCCCCEEECSCBTT-BCTTSGGGHHHHHHHHHHTCCEEECCCCC
T ss_pred HHHHHHHHHHhhcCceEEEECCCCCC-CCCCCcchHHHHHHHHHcCCeEEECCCCC
Confidence 45678999887779999997655444 34678899999999999999999998653
No 112
>2a3l_A AMP deaminase, AMPD; atampd, AT2G38280, adenosine 5'-monophosphate deaminase, COF 5'-phosphate, structural genomics; HET: CF5; 3.34A {Arabidopsis thaliana} SCOP: c.1.9.1
Probab=64.47 E-value=6.2 Score=43.89 Aligned_cols=58 Identities=7% Similarity=-0.045 Sum_probs=38.7
Q ss_pred HHHHHhcCCceEEeCCCCCCChh--hhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCC
Q psy6858 326 LLTLLNENALQTTGSDNCTFNKN--QKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNL 403 (592)
Q Consensus 326 l~~~l~~G~~~~~gsD~~~~~~~--~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl 403 (592)
+..+++.|+.++++||...++.. ..+. -|+++.... .+++..++.++ |.|++++.++
T Consensus 583 i~~ll~~Gv~VsLgTDdp~~~~~t~~dL~--------------~Ey~~aa~~------~~ls~~dl~~l-a~Ns~~asfl 641 (701)
T 2a3l_A 583 FPVFFLRGLNVSLSTDDPLQIHLTKEPLV--------------EEYSIAASV------WKLSACDLCEI-ARNSVYQSGF 641 (701)
T ss_dssp HHHHHHTTCCEEECCBCHHHHCCSSSHHH--------------HHHHHHHHH------HTCCHHHHHHH-HHHHHHHSCC
T ss_pred HHHHHHCCCcEEEeCCCccccCCCCcCHH--------------HHHHHHHHH------cCCCHHHHHHH-HHHHHHHhCC
Confidence 34789999999999998654322 0110 033322222 35899997777 8999999998
Q ss_pred C
Q psy6858 404 Y 404 (592)
Q Consensus 404 ~ 404 (592)
.
T Consensus 642 ~ 642 (701)
T 2a3l_A 642 S 642 (701)
T ss_dssp C
T ss_pred C
Confidence 4
No 113
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=61.39 E-value=78 Score=29.74 Aligned_cols=85 Identities=11% Similarity=0.003 Sum_probs=45.2
Q ss_pred HHHHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeE-EEecCchhhhHHHHHHHHHcCCCCCCCccCCCc
Q psy6858 154 QEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIA-MVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRP 232 (592)
Q Consensus 154 ~~~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~-~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p 232 (592)
++.-+.+++.|...+.+..........+...+.++.+.+++.|+.+ .+|+... +.. +
T Consensus 22 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~--------------~~~--------~ 79 (272)
T 2q02_A 22 EAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYP--------------FNQ--------L 79 (272)
T ss_dssp HHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETT--------------TTS--------C
T ss_pred HHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhc--------------cCC--------c
Confidence 3444444556777776653221111123345666666777778776 6664311 000 0
Q ss_pred HHHHHHHHHHHHHHhcccCCCEEEEecc
Q psy6858 233 EEVEAEAVTRACTIANQVDCPLYVVHIM 260 (592)
Q Consensus 233 ~~~e~eav~~~i~la~~~~~pl~i~hv~ 260 (592)
.+...+.+.+.+.+|+..|++..++|..
T Consensus 80 ~~~~~~~~~~~i~~a~~lG~~~v~~~~g 107 (272)
T 2q02_A 80 TEEVVKKTEGLLRDAQGVGARALVLCPL 107 (272)
T ss_dssp CHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEccC
Confidence 1112245667778888888877766654
No 114
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=58.99 E-value=1e+02 Score=29.24 Aligned_cols=69 Identities=23% Similarity=0.258 Sum_probs=44.8
Q ss_pred HHHHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecC---chhhhHHHHHHHHHcCCCCCCCc
Q psy6858 154 QEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAE---NGEIIDKNTQKLLAAGIKGPEGH 227 (592)
Q Consensus 154 ~~~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae---~~~~i~~~~~~~~~~G~~~p~~~ 227 (592)
+..-.++++.|..++|.| .+++. -..+|++.+.+.|.+.|+ .+.+. +-+.+.+..+.+++.|+.-..-|
T Consensus 171 etAiaml~dmG~~SvKff-PM~Gl--~~leEl~avAkAca~~g~--~lEPTGGIdl~Nf~~I~~i~l~aGv~~viPH 242 (275)
T 3m6y_A 171 KTAIALVRDMGGNSLKYF-PMKGL--AHEEEYRAVAKACAEEGF--ALEPTGGIDKENFETIVRIALEANVEQVIPH 242 (275)
T ss_dssp HHHHHHHHHHTCCEEEEC-CCTTT--TTHHHHHHHHHHHHHHTC--EEEEBSSCCTTTHHHHHHHHHHTTCSCBCCE
T ss_pred HHHHHHHHHcCCCeeeEe-ecCCc--ccHHHHHHHHHHHHHcCc--eECCCCCccHhHHHHHHHHHHHcCCCeeccc
Confidence 444556677899999966 45554 378899999999999998 33332 22224445555666665544444
No 115
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=54.77 E-value=57 Score=32.07 Aligned_cols=98 Identities=12% Similarity=0.087 Sum_probs=58.0
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc----CCeEEEecC--chhhhHHHHHHHHHcCCCCCC--CccCCCcH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL----GAIAMVHAE--NGEIIDKNTQKLLAAGIKGPE--GHQLSRPE 233 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~----g~~~~vHae--~~~~i~~~~~~~~~~G~~~p~--~~~~s~p~ 233 (592)
+.|+.++-+.-+-.....++.+|-.++++.+.+. ..++.+++. +.....+..+.+.+.|.++.- -..+..|.
T Consensus 39 ~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s 118 (301)
T 3m5v_A 39 ENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAPYYNKPT 118 (301)
T ss_dssp HTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCC
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCC
Confidence 4688876544333334567888877777776653 467777753 333334455666677765422 11222343
Q ss_pred HHHHHHHHHHHHHhcccCCCEEEEeccc
Q psy6858 234 EVEAEAVTRACTIANQVDCPLYVVHIMS 261 (592)
Q Consensus 234 ~~e~eav~~~i~la~~~~~pl~i~hv~s 261 (592)
+- +.+..-..+++..+.|+.+.++-.
T Consensus 119 ~~--~l~~~f~~va~a~~lPiilYn~P~ 144 (301)
T 3m5v_A 119 QQ--GLYEHYKAIAQSVDIPVLLYNVPG 144 (301)
T ss_dssp HH--HHHHHHHHHHHHCSSCEEEEECHH
T ss_pred HH--HHHHHHHHHHHhCCCCEEEEeCch
Confidence 32 344455567777899999998753
No 116
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=53.81 E-value=1.5e+02 Score=28.08 Aligned_cols=94 Identities=16% Similarity=0.131 Sum_probs=56.8
Q ss_pred HHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCc--hh-hhHHHHHHHHHcCCCCCCCccCCCcHH
Q psy6858 158 ELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAEN--GE-IIDKNTQKLLAAGIKGPEGHQLSRPEE 234 (592)
Q Consensus 158 ~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~--~~-~i~~~~~~~~~~G~~~p~~~~~s~p~~ 234 (592)
+.+++.|...+.++... ...++++.+.++.+.++++|+.+..+... +. ...... .-...+...+ ...+
T Consensus 28 ~~~~~~G~~~vEl~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~------~~r~ 98 (290)
T 3tva_A 28 EVAQDLKVPTVQVHAPH--PHTRTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPT-TARTVGLVPL------ETRA 98 (290)
T ss_dssp HHHHHTTCSEEEEECCC--GGGCSHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHH-HHHHSSSCST------TTHH
T ss_pred HHHHHcCCCEEEecCCC--CCcCCHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccc-cccccCCCCH------HHHH
Confidence 33455699998877532 22357888999999999999998877421 00 000000 0001111111 1122
Q ss_pred HHHHHHHHHHHHhcccCCCEEEEecc
Q psy6858 235 VEAEAVTRACTIANQVDCPLYVVHIM 260 (592)
Q Consensus 235 ~e~eav~~~i~la~~~~~pl~i~hv~ 260 (592)
...+.+.+.+.+|...|++..++|..
T Consensus 99 ~~~~~~~~~i~~a~~lG~~~v~~~~G 124 (290)
T 3tva_A 99 SRVAEMKEISDFASWVGCPAIGLHIG 124 (290)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 33467888999999999999888864
No 117
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=53.59 E-value=74 Score=31.31 Aligned_cols=97 Identities=15% Similarity=0.158 Sum_probs=57.1
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEecC--chhhhHHHHHHHHHcCCCCCC--CccCCCcHH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAE--NGEIIDKNTQKLLAAGIKGPE--GHQLSRPEE 234 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae--~~~~i~~~~~~~~~~G~~~p~--~~~~s~p~~ 234 (592)
+.|+.++-+.-+-.....++.+|-.++++.+.+. .+++.+++. +.....+..+.+.+.|.++.- ...+..|.+
T Consensus 47 ~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~ 126 (304)
T 3l21_A 47 DQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQ 126 (304)
T ss_dssp HTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCH
T ss_pred HcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCH
Confidence 4588777554333334567888877777766553 457777753 333334445666667765422 112233332
Q ss_pred HHHHHHHHHHHHhcccCCCEEEEecc
Q psy6858 235 VEAEAVTRACTIANQVDCPLYVVHIM 260 (592)
Q Consensus 235 ~e~eav~~~i~la~~~~~pl~i~hv~ 260 (592)
.+.+..-..+++..+.|+.+.++-
T Consensus 127 --~~l~~~f~~va~a~~lPiilYn~P 150 (304)
T 3l21_A 127 --RGLQAHFTAVADATELPMLLYDIP 150 (304)
T ss_dssp --HHHHHHHHHHHTSCSSCEEEEECH
T ss_pred --HHHHHHHHHHHHhcCCCEEEEeCc
Confidence 234445556788889999999875
No 118
>4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp}
Probab=51.96 E-value=26 Score=36.41 Aligned_cols=61 Identities=11% Similarity=0.062 Sum_probs=45.5
Q ss_pred ccCCC-hHHHHHHHHHHHHcCCcEEEEEEee----CCCcCCCHHHHHHHHHHHHHcCCeEEEecCch
Q psy6858 145 ITWWS-DQVQQEMAELCEKHGVNSFKTFMAY----KGLYMLSDGELYDAFSAIKNLGAIAMVHAENG 206 (592)
Q Consensus 145 ~~~~~-~~~~~~~~~lv~~~Gv~~~k~~~~~----~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~ 206 (592)
++.+. +...+|++++++ .|+.++++...+ .+...+.++.+..+++.|.++|+++.+|....
T Consensus 169 v~~~d~~~a~~EL~r~~~-~G~~Gv~l~p~~~~~~~g~~~l~d~~~~pl~~~~~elg~pV~iH~g~~ 234 (423)
T 4dzi_A 169 VSLADPTRAVEEVDFVLA-RGAKLVLVRPAPVPGLVKPRSLGDRSHDPVWARLAEAGVPVGFHLSDS 234 (423)
T ss_dssp CCCSSHHHHHHHHHHHHH-TTCSCEECCSSCBCCSSSCBCTTCGGGHHHHHHHHHHTCCEEEECCCC
T ss_pred CCccCHHHHHHHHHHHHH-cCCeEEEEecCCCCCCCCCCCCCCccHHHHHHHHHhcCCeEEEeCCCC
Confidence 44344 346788998885 699998875322 23345678899999999999999999998654
No 119
>3fy3_A Hemolysin; beta helix, solenoid, two partner secretion, cell membrane, cell outer membrane, cytolysis, hemolysis, membra; 1.80A {Proteus mirabilis}
Probab=51.09 E-value=19 Score=34.14 Aligned_cols=43 Identities=28% Similarity=0.468 Sum_probs=33.7
Q ss_pred ccccC-CCCccEEEEeCCceEEecCCcccccCCCCcccCeEEee-----eeeEEEECCEEEEECCeeee
Q psy6858 408 GVIAE-GSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHG-----VPEYVIVGGRVCVDEGNLRV 470 (592)
Q Consensus 408 G~I~~-G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g-----~~~~Viv~GkvV~~~g~l~~ 470 (592)
|.||+ |+.||+||-+|+ |+.|.| ....++.=|+..+++|+|..
T Consensus 94 G~lEVaG~~AdvIiANPn--------------------GItcnGcgFiNt~~~TLtTG~p~~~~G~l~~ 142 (236)
T 3fy3_A 94 GQQEVFGIAAEYVLSNPN--------------------GITCDGCGFINTSRSSLVVGNPLFENGQLKG 142 (236)
T ss_dssp SEEEEEESCEEEEEECTT--------------------CEEESSEEEESEEEEEEESSEEEEETTEEEE
T ss_pred cEEEEcCCCCCEEEECCC--------------------CEEEeCcEEEccCCeEEEEeeEEecCCceeE
Confidence 55654 899999999998 455554 56789999999999998753
No 120
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=46.97 E-value=86 Score=30.58 Aligned_cols=99 Identities=12% Similarity=0.050 Sum_probs=58.6
Q ss_pred HHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEecC--chhhhHHHHHHHHHcCCCCCC--CccCCCcH
Q psy6858 161 EKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAE--NGEIIDKNTQKLLAAGIKGPE--GHQLSRPE 233 (592)
Q Consensus 161 ~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae--~~~~i~~~~~~~~~~G~~~p~--~~~~s~p~ 233 (592)
.+.|+.++-+.-+-.....++.+|-.++++.+.+. ..++.+++. +.....+..+.+.+.|.++.- -..+..|.
T Consensus 33 i~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~ 112 (292)
T 3daq_A 33 LENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNKTN 112 (292)
T ss_dssp HHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCC
T ss_pred HHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCCCCCC
Confidence 34688887655443344567888877777766653 367777763 333334455666677765422 11223343
Q ss_pred HHHHHHHHHHHHHhcccCCCEEEEeccc
Q psy6858 234 EVEAEAVTRACTIANQVDCPLYVVHIMS 261 (592)
Q Consensus 234 ~~e~eav~~~i~la~~~~~pl~i~hv~s 261 (592)
+- +.+..--.+++..+.|+.+.++-.
T Consensus 113 ~~--~l~~~f~~ia~a~~lPiilYn~P~ 138 (292)
T 3daq_A 113 QR--GLVKHFEAIADAVKLPVVLYNVPS 138 (292)
T ss_dssp HH--HHHHHHHHHHHHHCSCEEEEECHH
T ss_pred HH--HHHHHHHHHHHhCCCCEEEEeccc
Confidence 32 334445556777799999998753
No 121
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=46.00 E-value=83 Score=30.37 Aligned_cols=89 Identities=11% Similarity=0.116 Sum_probs=57.4
Q ss_pred HHHHHHHHHHcCCcEEEEEEeeCCC---cCCCHHHHHHHHHHHHHcCC-eEEEecCchhhhHHHHHHHHHcCCCCCCCcc
Q psy6858 153 QQEMAELCEKHGVNSFKTFMAYKGL---YMLSDGELYDAFSAIKNLGA-IAMVHAENGEIIDKNTQKLLAAGIKGPEGHQ 228 (592)
Q Consensus 153 ~~~~~~lv~~~Gv~~~k~~~~~~~~---~~~~~~~l~~~~~~a~~~g~-~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~ 228 (592)
.++.-+.+++.|...+.++...... ..++++++.++.+.++++|+ .+.+|+...- .
T Consensus 20 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~h~~~~~--------------------n 79 (303)
T 3aal_A 20 LLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIEEIVVHAPYII--------------------N 79 (303)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCCEEEEECCTTC--------------------C
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCceEEEeccccc--------------------c
Confidence 3444445566799999886433211 12345678888888999999 7889964210 0
Q ss_pred CCCc---H--HHHHHHHHHHHHHhcccCCCEEEEeccc
Q psy6858 229 LSRP---E--EVEAEAVTRACTIANQVDCPLYVVHIMS 261 (592)
Q Consensus 229 ~s~p---~--~~e~eav~~~i~la~~~~~pl~i~hv~s 261 (592)
+..| + +...+.+.+++.+|...|++..++|...
T Consensus 80 l~s~d~~~~r~~~~~~~~~~i~~A~~lGa~~vv~h~g~ 117 (303)
T 3aal_A 80 IGNTTNLDTFSLGVDFLRAEIERTEAIGAKQLVLHPGA 117 (303)
T ss_dssp TTCSSCHHHHHHHHHHHHHHHHHHHHHTCSEEEECCEE
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCc
Confidence 1111 1 1224667788999999999998888763
No 122
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=45.69 E-value=1.2e+02 Score=29.72 Aligned_cols=98 Identities=14% Similarity=0.057 Sum_probs=58.0
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEecC--chhhhHHHHHHHHHcCCCCCC--CccCCCcHH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAE--NGEIIDKNTQKLLAAGIKGPE--GHQLSRPEE 234 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae--~~~~i~~~~~~~~~~G~~~p~--~~~~s~p~~ 234 (592)
+.|+.++-+.-+-.....++.+|-.++++.+.+. ..++.+++. +.....+..+.+.+.|.++.- -..+..|.+
T Consensus 39 ~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~ 118 (297)
T 3flu_A 39 ENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQ 118 (297)
T ss_dssp HTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCH
T ss_pred HcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCH
Confidence 4688877654433334567888877777776553 366777753 333334455666777765422 112233433
Q ss_pred HHHHHHHHHHHHhcccCCCEEEEeccc
Q psy6858 235 VEAEAVTRACTIANQVDCPLYVVHIMS 261 (592)
Q Consensus 235 ~e~eav~~~i~la~~~~~pl~i~hv~s 261 (592)
- +.+..--.+++..+.|+.+.++-.
T Consensus 119 ~--~l~~~f~~va~a~~lPiilYn~P~ 143 (297)
T 3flu_A 119 E--GIYQHFKTIAEATSIPMIIYNVPG 143 (297)
T ss_dssp H--HHHHHHHHHHHHCCSCEEEEECHH
T ss_pred H--HHHHHHHHHHHhCCCCEEEEECCc
Confidence 2 334455567777899999998753
No 123
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A*
Probab=44.90 E-value=98 Score=31.41 Aligned_cols=57 Identities=14% Similarity=0.205 Sum_probs=37.7
Q ss_pred CC-ceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCC
Q psy6858 333 NA-LQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNL 403 (592)
Q Consensus 333 G~-~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl 403 (592)
|. .+.+|||..- +...|.|+..+. .++.+.+.+.. .+++.+++-+++-.|..+.|.-
T Consensus 279 G~dhVgiGsDfdG------------~~~~p~gl~d~~-~~p~l~~~L~~-~G~se~~i~ki~g~N~lRvl~~ 336 (369)
T 1itu_A 279 GARAVGFGGDFDG------------VPRVPEGLEDVS-KYPDLIAELLR-RNWTEAEVKGALADNLLRVFEA 336 (369)
T ss_dssp CGGGEEECCCTTS------------CSCCCBTCSSTT-CHHHHHHHHHH-TTCCHHHHHHHHTHHHHHHHHH
T ss_pred CCCeEEECCCCCC------------CCCCCCCCCCHH-HHHHHHHHHHH-cCCCHHHHHHHHhHhHHHHHHH
Confidence 54 5899999732 122344443333 34555554444 4589999999999999999864
No 124
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=44.51 E-value=1.2e+02 Score=29.65 Aligned_cols=98 Identities=10% Similarity=0.109 Sum_probs=57.7
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEecC--chhhhHHHHHHHHHcCCCCCCC--ccCCC--c
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAE--NGEIIDKNTQKLLAAGIKGPEG--HQLSR--P 232 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae--~~~~i~~~~~~~~~~G~~~p~~--~~~s~--p 232 (592)
+.|+.++-+.-+-.....++.+|-.++++.+.+. ..++.++.. +.....+..+.+.+.|.++.-- ..+.. |
T Consensus 46 ~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~ 125 (307)
T 3s5o_A 46 TFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYYRGRM 125 (307)
T ss_dssp TSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCTTGGGC
T ss_pred HcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCcCCCCC
Confidence 4688777655433334568888888888877764 356777753 3333334556666777654221 11111 2
Q ss_pred HHHHHHHHHHHHHHhcccCCCEEEEeccc
Q psy6858 233 EEVEAEAVTRACTIANQVDCPLYVVHIMS 261 (592)
Q Consensus 233 ~~~e~eav~~~i~la~~~~~pl~i~hv~s 261 (592)
.+ .+.+.....+++..+.|+.+.++-.
T Consensus 126 s~--~~l~~~f~~ia~a~~lPiilYn~P~ 152 (307)
T 3s5o_A 126 SS--AALIHHYTKVADLSPIPVVLYSVPA 152 (307)
T ss_dssp CH--HHHHHHHHHHHHHCSSCEEEEECHH
T ss_pred CH--HHHHHHHHHHHhhcCCCEEEEeCCc
Confidence 22 2344445556777899999999753
No 125
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=43.06 E-value=99 Score=30.56 Aligned_cols=98 Identities=12% Similarity=0.066 Sum_probs=54.4
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEecC--chhhhHHHHHHHHHcCCCCCCC--ccCCCcHH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAE--NGEIIDKNTQKLLAAGIKGPEG--HQLSRPEE 234 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae--~~~~i~~~~~~~~~~G~~~p~~--~~~s~p~~ 234 (592)
+.|+.++-+.-+-.....++.+|-.++++.+.+. .+++.+++. +.....+..+.+.+.|.++.-- ..+..|.+
T Consensus 56 ~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~ 135 (315)
T 3na8_A 56 DGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISYWKLNE 135 (315)
T ss_dssp HTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCCCH
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCH
Confidence 4577766544333334567777777777666542 356666653 2333334455666667554211 11223333
Q ss_pred HHHHHHHHHHHHhcccCCCEEEEeccc
Q psy6858 235 VEAEAVTRACTIANQVDCPLYVVHIMS 261 (592)
Q Consensus 235 ~e~eav~~~i~la~~~~~pl~i~hv~s 261 (592)
- +.+..-..+++..+.|+.+.++-.
T Consensus 136 ~--~l~~~f~~va~a~~lPiilYn~P~ 160 (315)
T 3na8_A 136 A--EVFQHYRAVGEAIGVPVMLYNNPG 160 (315)
T ss_dssp H--HHHHHHHHHHHHCSSCEEEEECHH
T ss_pred H--HHHHHHHHHHHhCCCcEEEEeCcc
Confidence 2 344445567777899999999753
No 126
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=42.79 E-value=1.2e+02 Score=29.35 Aligned_cols=98 Identities=15% Similarity=0.099 Sum_probs=57.7
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEecC--chhhhHHHHHHHHHcCCCCCC--CccCCCcHH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAE--NGEIIDKNTQKLLAAGIKGPE--GHQLSRPEE 234 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae--~~~~i~~~~~~~~~~G~~~p~--~~~~s~p~~ 234 (592)
+.|+.++-+.-+-.-...++.+|-.++++.+.+. ..++.+++. +.....+..+.+.+.|.++.- -..+..|.+
T Consensus 33 ~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~ 112 (291)
T 3tak_A 33 EQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYYNKPTQ 112 (291)
T ss_dssp HHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCH
T ss_pred HCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCH
Confidence 4588877544333334567888877777776553 367777753 333334455666677765422 112223433
Q ss_pred HHHHHHHHHHHHhcccCCCEEEEeccc
Q psy6858 235 VEAEAVTRACTIANQVDCPLYVVHIMS 261 (592)
Q Consensus 235 ~e~eav~~~i~la~~~~~pl~i~hv~s 261 (592)
- +.+..--.+++..+.|+.+.++-.
T Consensus 113 ~--~l~~~f~~ia~a~~lPiilYn~P~ 137 (291)
T 3tak_A 113 E--GLYQHYKAIAEAVELPLILYNVPG 137 (291)
T ss_dssp H--HHHHHHHHHHHHCCSCEEEEECHH
T ss_pred H--HHHHHHHHHHHhcCCCEEEEeccc
Confidence 2 344455567777899999998743
No 127
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=41.97 E-value=1.4e+02 Score=29.19 Aligned_cols=98 Identities=11% Similarity=0.095 Sum_probs=54.4
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEecC--chhhhHHHHHHHHHcCCCCCC--CccCCCcHH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAE--NGEIIDKNTQKLLAAGIKGPE--GHQLSRPEE 234 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae--~~~~i~~~~~~~~~~G~~~p~--~~~~s~p~~ 234 (592)
+.|+.++-+.-+-.-...++.+|-.++++.+.+. .+++.+++. +.....+..+.+.+.|.++.- -..+..|.+
T Consensus 44 ~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~ 123 (301)
T 1xky_A 44 DNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPYYNKPSQ 123 (301)
T ss_dssp HTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCH
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCH
Confidence 4577776544332234457777777776665542 356666653 223333445556666765421 112333433
Q ss_pred HHHHHHHHHHHHhcccCCCEEEEeccc
Q psy6858 235 VEAEAVTRACTIANQVDCPLYVVHIMS 261 (592)
Q Consensus 235 ~e~eav~~~i~la~~~~~pl~i~hv~s 261 (592)
- +.+..-..+++..+.|+.+.++-.
T Consensus 124 ~--~l~~~f~~va~a~~lPiilYn~P~ 148 (301)
T 1xky_A 124 E--GMYQHFKAIAESTPLPVMLYNVPG 148 (301)
T ss_dssp H--HHHHHHHHHHHTCSSCEEEEECHH
T ss_pred H--HHHHHHHHHHHhcCCCEEEEeCcc
Confidence 2 334444557777899999988753
No 128
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=41.27 E-value=1.6e+02 Score=28.76 Aligned_cols=98 Identities=14% Similarity=0.136 Sum_probs=55.2
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEecCc--hhhhHHHHHHHHHcCCCCCC--CccCCCcHH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAEN--GEIIDKNTQKLLAAGIKGPE--GHQLSRPEE 234 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae~--~~~i~~~~~~~~~~G~~~p~--~~~~s~p~~ 234 (592)
+.|++++-+.-+-.-...++.+|-.++++.+.+. ..++.+++.. .....+..+.+.+.|.++.- -..+..|.+
T Consensus 48 ~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~ 127 (304)
T 3cpr_A 48 DKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTPYYSKPSQ 127 (304)
T ss_dssp HTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCH
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCH
Confidence 4577776544333334567888777777666542 3567677532 23333445566667765421 112333433
Q ss_pred HHHHHHHHHHHHhcccCCCEEEEeccc
Q psy6858 235 VEAEAVTRACTIANQVDCPLYVVHIMS 261 (592)
Q Consensus 235 ~e~eav~~~i~la~~~~~pl~i~hv~s 261 (592)
- +.+..-..+++..+.|+.+.++-.
T Consensus 128 ~--~l~~~f~~ia~a~~lPiilYn~P~ 152 (304)
T 3cpr_A 128 E--GLLAHFGAIAAATEVPICLYDIPG 152 (304)
T ss_dssp H--HHHHHHHHHHHHCCSCEEEEECHH
T ss_pred H--HHHHHHHHHHHhcCCCEEEEeCcc
Confidence 2 334444456777899999998753
No 129
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=41.01 E-value=1.1e+02 Score=30.36 Aligned_cols=97 Identities=14% Similarity=0.104 Sum_probs=53.8
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEecC--chhhhHHHHHHHHHcCCCCCC--CccCCCcHH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAE--NGEIIDKNTQKLLAAGIKGPE--GHQLSRPEE 234 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae--~~~~i~~~~~~~~~~G~~~p~--~~~~s~p~~ 234 (592)
+.|+.++-+.-+-.-...++.+|-.++++.+.+. .+++.+++. +.....+..+.+.+.|.++.- -.++..|.+
T Consensus 54 ~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~ 133 (315)
T 3si9_A 54 TQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQ 133 (315)
T ss_dssp HTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCH
T ss_pred HcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCH
Confidence 4577766443332234557777777776665543 356666653 233333445566666665421 112233433
Q ss_pred HHHHHHHHHHHHhcccCCCEEEEecc
Q psy6858 235 VEAEAVTRACTIANQVDCPLYVVHIM 260 (592)
Q Consensus 235 ~e~eav~~~i~la~~~~~pl~i~hv~ 260 (592)
- +.+..-..+++..+.|+.+.++-
T Consensus 134 ~--~l~~~f~~va~a~~lPiilYn~P 157 (315)
T 3si9_A 134 R--GLYTHFSSIAKAISIPIIIYNIP 157 (315)
T ss_dssp H--HHHHHHHHHHHHCSSCEEEEECH
T ss_pred H--HHHHHHHHHHHcCCCCEEEEeCc
Confidence 2 33444556777789999999875
No 130
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=40.76 E-value=1.1e+02 Score=30.13 Aligned_cols=97 Identities=11% Similarity=0.051 Sum_probs=54.2
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEecC--chhhhHHHHHHHHHcCCCCCC--CccCCCcHH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAE--NGEIIDKNTQKLLAAGIKGPE--GHQLSRPEE 234 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae--~~~~i~~~~~~~~~~G~~~p~--~~~~s~p~~ 234 (592)
+.|+.++-+.-+-.....++.+|-.++++.+.+. .+++.+++. +.....+..+.+.+.|.++.- -..+..|.+
T Consensus 55 ~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~s~ 134 (314)
T 3qze_A 55 QEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNKPTQ 134 (314)
T ss_dssp HHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCH
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCH
Confidence 3577776554333334567777777776665543 356666653 233333445566666765422 112223433
Q ss_pred HHHHHHHHHHHHhcccCCCEEEEecc
Q psy6858 235 VEAEAVTRACTIANQVDCPLYVVHIM 260 (592)
Q Consensus 235 ~e~eav~~~i~la~~~~~pl~i~hv~ 260 (592)
- +.+..-..+++..+.|+.+.++-
T Consensus 135 ~--~l~~~f~~va~a~~lPiilYn~P 158 (314)
T 3qze_A 135 E--GMYQHFRHIAEAVAIPQILYNVP 158 (314)
T ss_dssp H--HHHHHHHHHHHHSCSCEEEEECH
T ss_pred H--HHHHHHHHHHHhcCCCEEEEeCc
Confidence 2 34444556777789999999875
No 131
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=40.70 E-value=1.4e+02 Score=29.05 Aligned_cols=98 Identities=14% Similarity=0.075 Sum_probs=56.3
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEecCc--hhhhHHHHHHHHHcCCCCCC--CccCCCcHH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAEN--GEIIDKNTQKLLAAGIKGPE--GHQLSRPEE 234 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae~--~~~i~~~~~~~~~~G~~~p~--~~~~s~p~~ 234 (592)
+.|++++-+.-+-.-...++.+|-.++++.+.+. ..++.+++.. .....+..+.+.+.|.++.- -..+..|.+
T Consensus 32 ~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~ 111 (294)
T 2ehh_A 32 DNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPYYNKPTQ 111 (294)
T ss_dssp TTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCH
T ss_pred HCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCH
Confidence 4688776554333334567888877777766652 3667777532 23333445666677765421 112333433
Q ss_pred HHHHHHHHHHHHhcccCCCEEEEeccc
Q psy6858 235 VEAEAVTRACTIANQVDCPLYVVHIMS 261 (592)
Q Consensus 235 ~e~eav~~~i~la~~~~~pl~i~hv~s 261 (592)
- +.+..--.+++..+.|+.+.++-.
T Consensus 112 ~--~l~~~f~~va~a~~lPiilYn~P~ 136 (294)
T 2ehh_A 112 R--GLYEHFKTVAQEVDIPIIIYNIPS 136 (294)
T ss_dssp H--HHHHHHHHHHHHCCSCEEEEECHH
T ss_pred H--HHHHHHHHHHHhcCCCEEEEeCCc
Confidence 3 333444456777899999988653
No 132
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=40.44 E-value=1.1e+02 Score=32.37 Aligned_cols=25 Identities=16% Similarity=0.082 Sum_probs=20.5
Q ss_pred CHHHHHHHHHH--HHHcCCeEEEecCc
Q psy6858 181 SDGELYDAFSA--IKNLGAIAMVHAEN 205 (592)
Q Consensus 181 ~~~~l~~~~~~--a~~~g~~~~vHae~ 205 (592)
+...+.++++. +++.|+++.+|+..
T Consensus 307 p~~~f~~~f~~~~A~~~gl~~t~HAGE 333 (508)
T 3lgd_A 307 SLHDYKEALMIPAKDGVKLPYFFHAGE 333 (508)
T ss_dssp CTGGGHHHHTHHHHTTCCCCBCCEECC
T ss_pred CHHHHHHHHHHHHHHHcCCceeeeccc
Confidence 45678888888 88999999999854
No 133
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=40.44 E-value=1.5e+02 Score=29.66 Aligned_cols=97 Identities=13% Similarity=0.104 Sum_probs=55.8
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCc--hhhhHHHHHHHHHcCCCCCC--CccCCC-cHHHH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAEN--GEIIDKNTQKLLAAGIKGPE--GHQLSR-PEEVE 236 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~--~~~i~~~~~~~~~~G~~~p~--~~~~s~-p~~~e 236 (592)
+.|+.++-+.-+-.-...++.+|-.++++.+..-.+++.+++.. .....+..+.+.+.|.++.- -..+.. |.+-
T Consensus 58 ~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~~s~~- 136 (344)
T 2hmc_A 58 ADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVLSRGSVIA- 136 (344)
T ss_dssp HTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCSSSTTCHH-
T ss_pred HcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCccCCCCCHH-
Confidence 45887765543333345678888877777633345677777532 23333445566667765421 112233 3322
Q ss_pred HHHHHHHHHHhc-ccCCCEEEEecc
Q psy6858 237 AEAVTRACTIAN-QVDCPLYVVHIM 260 (592)
Q Consensus 237 ~eav~~~i~la~-~~~~pl~i~hv~ 260 (592)
+.+..-..+++ ..+.|+.+.++-
T Consensus 137 -~l~~~f~~IA~aa~~lPiilYn~P 160 (344)
T 2hmc_A 137 -AQKAHFKAILSAAPEIPAVIYNSP 160 (344)
T ss_dssp -HHHHHHHHHHHHSTTSCEEEEEBG
T ss_pred -HHHHHHHHHHhhCCCCcEEEEecC
Confidence 33444445677 789999998875
No 134
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=40.26 E-value=1.5e+02 Score=27.87 Aligned_cols=69 Identities=20% Similarity=0.149 Sum_probs=43.5
Q ss_pred HHHHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCc---hhhhHHHHHHHHHcCCCCCCCc
Q psy6858 154 QEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAEN---GEIIDKNTQKLLAAGIKGPEGH 227 (592)
Q Consensus 154 ~~~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~---~~~i~~~~~~~~~~G~~~p~~~ 227 (592)
+..-.++++.|..++|.| .+++. -..+|++.+.+.|.+.|+ .+.+.. -+.+.+..+.+++.|+.-.--|
T Consensus 148 etAiaml~dmG~~SvKff-Pm~Gl--~~l~E~~avAka~a~~g~--~lEPTGGIdl~N~~~I~~i~l~aGv~~viPH 219 (249)
T 3m0z_A 148 ETAIALLKDMGGSSIKYF-PMGGL--KHRAEFEAVAKACAAHDF--WLEPTGGIDLENYSEILKIALDAGVSKIIPH 219 (249)
T ss_dssp HHHHHHHHHTTCCEEEEC-CCTTT--TTHHHHHHHHHHHHHTTC--EEEEBSSCCTTTHHHHHHHHHHHTCSCBCCB
T ss_pred HHHHHHHHHcCCCeeeEe-ecCCc--ccHHHHHHHHHHHHHcCc--eECCCCCccHhhHHHHHHHHHHcCCCeeccc
Confidence 444556778899999966 45554 378899999999999998 333322 2223344445555555443333
No 135
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=40.02 E-value=1.7e+02 Score=27.51 Aligned_cols=87 Identities=13% Similarity=0.093 Sum_probs=42.3
Q ss_pred HHHHHHHHcCCcEEEEEEeeC-CCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcH
Q psy6858 155 EMAELCEKHGVNSFKTFMAYK-GLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPE 233 (592)
Q Consensus 155 ~~~~lv~~~Gv~~~k~~~~~~-~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~ 233 (592)
+.-+.+++.|...+-++..+. .....++..+.++.+.+++.|+.+..+..... ... ....
T Consensus 19 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~-------------~~~------~~~~ 79 (286)
T 3dx5_A 19 DIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITMISDYLD-------------ISL------SADF 79 (286)
T ss_dssp HHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCC-------------CST------TSCH
T ss_pred HHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEEEecCCC-------------CCC------chhH
Confidence 333444455766666542110 01112445566666667777776666532100 000 0011
Q ss_pred HHHHHHHHHHHHHhcccCCCEEEEecc
Q psy6858 234 EVEAEAVTRACTIANQVDCPLYVVHIM 260 (592)
Q Consensus 234 ~~e~eav~~~i~la~~~~~pl~i~hv~ 260 (592)
+...+.+.+++.+|...|++..++|..
T Consensus 80 ~~~~~~~~~~i~~A~~lG~~~v~~~~g 106 (286)
T 3dx5_A 80 EKTIEKCEQLAILANWFKTNKIRTFAG 106 (286)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEECSC
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 122345566777777777776666544
No 136
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=39.64 E-value=1.4e+02 Score=29.40 Aligned_cols=98 Identities=10% Similarity=0.102 Sum_probs=58.8
Q ss_pred HHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEecC--chhhhHHHHHHHHHcCCCCCCC--ccC---C
Q psy6858 161 EKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAE--NGEIIDKNTQKLLAAGIKGPEG--HQL---S 230 (592)
Q Consensus 161 ~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae--~~~~i~~~~~~~~~~G~~~p~~--~~~---s 230 (592)
.+.|+.++-+.-+-.-...++.+|-.++++.+.+. .+++.+++. +.....+..+.+.+.|.++.-- .++ .
T Consensus 39 i~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~Pyy~~~~ 118 (309)
T 3fkr_A 39 IDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPYHGATF 118 (309)
T ss_dssp HHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCBTTTB
T ss_pred HHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCCCCccCC
Confidence 34688877655443344568888888887776653 367777753 3333445566677777654211 111 2
Q ss_pred CcHHHHHHHHHHHHHHhcccCCCEEEEecc
Q psy6858 231 RPEEVEAEAVTRACTIANQVDCPLYVVHIM 260 (592)
Q Consensus 231 ~p~~~e~eav~~~i~la~~~~~pl~i~hv~ 260 (592)
.|.+- +.+..-..+++..+.|+.+.++-
T Consensus 119 ~~s~~--~l~~~f~~va~a~~lPiilYn~P 146 (309)
T 3fkr_A 119 RVPEA--QIFEFYARVSDAIAIPIMVQDAP 146 (309)
T ss_dssp CCCHH--HHHHHHHHHHHHCSSCEEEEECG
T ss_pred CCCHH--HHHHHHHHHHHhcCCCEEEEeCC
Confidence 34333 33344455677789999998874
No 137
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=39.54 E-value=1.5e+02 Score=28.96 Aligned_cols=98 Identities=15% Similarity=0.105 Sum_probs=52.4
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEecCc--hhhhHHHHHHHHHcCCCCCC--CccCCCcHH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAEN--GEIIDKNTQKLLAAGIKGPE--GHQLSRPEE 234 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae~--~~~i~~~~~~~~~~G~~~p~--~~~~s~p~~ 234 (592)
+.|++++-+.-+-.-...++.+|-.++++.+.+. .+++.+++.. .....+..+.+.+.|.++.- -..+..|.+
T Consensus 44 ~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~s~ 123 (306)
T 1o5k_A 44 ENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQ 123 (306)
T ss_dssp HTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCH
T ss_pred HcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCH
Confidence 3577766544332234456777766666665542 3556666432 22233344555566655421 112233433
Q ss_pred HHHHHHHHHHHHhcccCCCEEEEeccc
Q psy6858 235 VEAEAVTRACTIANQVDCPLYVVHIMS 261 (592)
Q Consensus 235 ~e~eav~~~i~la~~~~~pl~i~hv~s 261 (592)
- +.+..-..+++..+.|+.+.++-.
T Consensus 124 ~--~l~~~f~~va~a~~lPiilYn~P~ 148 (306)
T 1o5k_A 124 E--GLYQHYKYISERTDLGIVVYNVPG 148 (306)
T ss_dssp H--HHHHHHHHHHTTCSSCEEEEECHH
T ss_pred H--HHHHHHHHHHHhCCCCEEEEeCcc
Confidence 2 334444567788899999988653
No 138
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=39.32 E-value=1.6e+02 Score=28.60 Aligned_cols=99 Identities=12% Similarity=0.082 Sum_probs=57.8
Q ss_pred HHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEecCc--hhhhHHHHHHHHHcCCCCCC--CccCCCcH
Q psy6858 161 EKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAEN--GEIIDKNTQKLLAAGIKGPE--GHQLSRPE 233 (592)
Q Consensus 161 ~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae~--~~~i~~~~~~~~~~G~~~p~--~~~~s~p~ 233 (592)
-+.|+.++-+.-+-.-...++.+|-.++++.+.+. ..++.+++.. .....+..+.+.+.|.++.- -..+..|.
T Consensus 31 i~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s 110 (289)
T 2yxg_A 31 IENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYYNKPT 110 (289)
T ss_dssp HHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCC
T ss_pred HHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCC
Confidence 34688877654333334568888877777776652 3677777533 23333455666677766421 11233343
Q ss_pred HHHHHHHHHHHHHhcccCCCEEEEeccc
Q psy6858 234 EVEAEAVTRACTIANQVDCPLYVVHIMS 261 (592)
Q Consensus 234 ~~e~eav~~~i~la~~~~~pl~i~hv~s 261 (592)
+- +.+..--.+++..+.|+.+.++-.
T Consensus 111 ~~--~l~~~f~~ia~a~~lPiilYn~P~ 136 (289)
T 2yxg_A 111 QE--GLRKHFGKVAESINLPIVLYNVPS 136 (289)
T ss_dssp HH--HHHHHHHHHHHHCSSCEEEEECHH
T ss_pred HH--HHHHHHHHHHHhcCCCEEEEeCcc
Confidence 33 333444456777899999988753
No 139
>1rwr_A Filamentous hemagglutinin; type V secretion, beta-helix, adhesins, TPS domain, cell adhesion; 1.72A {Bordetella pertussis} SCOP: b.80.1.11
Probab=38.92 E-value=50 Score=32.43 Aligned_cols=41 Identities=27% Similarity=0.584 Sum_probs=31.6
Q ss_pred ccccC-CCCccEEEEeCCceEEecCCcccccCCCCcccCeEEee-----eeeEEEECCEEEEECCee
Q psy6858 408 GVIAE-GSDADIVVWNYKAKRTISAKTHAHACDYNIFEGLVCHG-----VPEYVIVGGRVCVDEGNL 468 (592)
Q Consensus 408 G~I~~-G~~ADlVv~d~~~~~~i~~~~~~~~~~~~~~~g~~~~g-----~~~~Viv~GkvV~~~g~l 468 (592)
|.||+ |+.||+||-+|+ |+.|.| ....++.-|+..+++|.+
T Consensus 90 G~lEVaG~~AdviiANPn--------------------GI~cnGcgFiNt~~~tLtTG~p~~~~g~l 136 (301)
T 1rwr_A 90 GTLEVYGKGADLIIANPN--------------------GISVNGLSTLNASNLTLTTGRPSVNGGRI 136 (301)
T ss_dssp EEEEEEESCEEEEEECTT--------------------CEEEEEEEEESEEEEEEECSEEEEETTEE
T ss_pred CEEEEccCCcCEEEECCC--------------------CEEEcCceEEccCCEEEecCceEEcCCeE
Confidence 44554 789999999998 445554 567899999998888876
No 140
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=38.79 E-value=1.5e+02 Score=29.48 Aligned_cols=98 Identities=15% Similarity=0.051 Sum_probs=57.7
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEecC--chhhhHHHHHHHHHcCCCCCC--CccCCCcHH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAE--NGEIIDKNTQKLLAAGIKGPE--GHQLSRPEE 234 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae--~~~~i~~~~~~~~~~G~~~p~--~~~~s~p~~ 234 (592)
+.|+.++-+.-+-.-...++.+|-.++++.+.+. .+++.+++. +.....+..+.+.+.|.++.- -..+..|.+
T Consensus 66 ~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~ 145 (332)
T 2r8w_A 66 AAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPVSYTPLTQ 145 (332)
T ss_dssp HHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCSSCCCH
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCH
Confidence 4588887654333334568888888877776653 366777753 223333455666677765421 112333433
Q ss_pred HHHHHHHHHHHHhcccCCCEEEEeccc
Q psy6858 235 VEAEAVTRACTIANQVDCPLYVVHIMS 261 (592)
Q Consensus 235 ~e~eav~~~i~la~~~~~pl~i~hv~s 261 (592)
- +.+..--.+++..+.|+.+.++-.
T Consensus 146 ~--~l~~~f~~VA~a~~lPiilYn~P~ 170 (332)
T 2r8w_A 146 E--EAYHHFAAVAGATALPLAIYNNPT 170 (332)
T ss_dssp H--HHHHHHHHHHHHCSSCEEEECCHH
T ss_pred H--HHHHHHHHHHHhcCCCEEEEeCcc
Confidence 3 333444456777899999988653
No 141
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=38.62 E-value=2.8e+02 Score=26.87 Aligned_cols=57 Identities=11% Similarity=-0.035 Sum_probs=38.9
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc--CCeEEEecCchh
Q psy6858 148 WSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL--GAIAMVHAENGE 207 (592)
Q Consensus 148 ~~~~~~~~~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~--g~~~~vHae~~~ 207 (592)
.+++...++.+.+.+.|+..+.+. .-.+. .++.+.+++++..++. +.++.+|..|+.
T Consensus 156 ~~~~~~~~~~~~~~~~G~d~i~l~-DT~G~--~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~ 214 (302)
T 2ftp_A 156 VDPRQVAWVARELQQMGCYEVSLG-DTIGV--GTAGATRRLIEAVASEVPRERLAGHFHDTY 214 (302)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEE-ESSSC--CCHHHHHHHHHHHTTTSCGGGEEEEEBCTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEe-CCCCC--cCHHHHHHHHHHHHHhCCCCeEEEEeCCCc
Confidence 445555555555557799887655 32333 6899999999888764 478999987643
No 142
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=38.17 E-value=1.5e+02 Score=29.18 Aligned_cols=96 Identities=10% Similarity=0.037 Sum_probs=55.4
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc--CCeEEEecC--chhhhHHHHHHHHHcCCCCCCC---ccCCCcHH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL--GAIAMVHAE--NGEIIDKNTQKLLAAGIKGPEG---HQLSRPEE 234 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~--g~~~~vHae--~~~~i~~~~~~~~~~G~~~p~~---~~~s~p~~ 234 (592)
+.|+.++-+.-+-.-...++.+|-.++++.+.+. .+++.+++. +.....+..+.+.+.|..+.-- +.. |.+
T Consensus 40 ~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~~~--~s~ 117 (313)
T 3dz1_A 40 EVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPPPSL--RTD 117 (313)
T ss_dssp HTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTC--CSH
T ss_pred HCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCCCCC--CCH
Confidence 4688776554333334567888877777766654 466777753 3333334456666667544110 112 322
Q ss_pred HHHHHHHHHHHHhcccC--CCEEEEeccc
Q psy6858 235 VEAEAVTRACTIANQVD--CPLYVVHIMS 261 (592)
Q Consensus 235 ~e~eav~~~i~la~~~~--~pl~i~hv~s 261 (592)
.+.+..-..+++..+ .|+.+.++-.
T Consensus 118 --~~l~~~f~~va~a~~~~lPiilYn~P~ 144 (313)
T 3dz1_A 118 --EQITTYFRQATEAIGDDVPWVLQDYPL 144 (313)
T ss_dssp --HHHHHHHHHHHHHHCTTSCEEEEECHH
T ss_pred --HHHHHHHHHHHHhCCCCCcEEEEeCcc
Confidence 244445556777777 9999998753
No 143
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=37.62 E-value=2.7e+02 Score=26.43 Aligned_cols=10 Identities=30% Similarity=0.488 Sum_probs=8.4
Q ss_pred CCeeEEeccc
Q psy6858 103 GGTTTIIDFA 112 (592)
Q Consensus 103 ~GtTti~d~~ 112 (592)
.|+|+|+|-.
T Consensus 13 ~GlT~v~dkg 22 (251)
T 1qwg_A 13 RGLTVVLDKG 22 (251)
T ss_dssp CCCEEEEESS
T ss_pred cCeeEEecCC
Confidence 6999999874
No 144
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=36.89 E-value=1.2e+02 Score=28.56 Aligned_cols=90 Identities=13% Similarity=0.049 Sum_probs=56.4
Q ss_pred HHHHHHHHHHcCCcEEEEEEeeCCC---cCCCHHHHHHHHHHHHHcCCe---EEEecCchhhhHHHHHHHHHcCCCCCCC
Q psy6858 153 QQEMAELCEKHGVNSFKTFMAYKGL---YMLSDGELYDAFSAIKNLGAI---AMVHAENGEIIDKNTQKLLAAGIKGPEG 226 (592)
Q Consensus 153 ~~~~~~lv~~~Gv~~~k~~~~~~~~---~~~~~~~l~~~~~~a~~~g~~---~~vHae~~~~i~~~~~~~~~~G~~~p~~ 226 (592)
.++.-+.+++.|...+.++...... ..++++++.++.+.+++.|+. +.+|+...- .+..
T Consensus 14 l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~------------~l~~--- 78 (285)
T 1qtw_A 14 LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLI------------NLGH--- 78 (285)
T ss_dssp HHHHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCGGGBCCBCCTTC------------CTTC---
T ss_pred HHHHHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCCceeEEecCCccc------------ccCC---
Confidence 3444455566799988875321111 125678889999999999997 677753210 0000
Q ss_pred ccCCCcH--HHHHHHHHHHHHHhcccCCCEEEEecc
Q psy6858 227 HQLSRPE--EVEAEAVTRACTIANQVDCPLYVVHIM 260 (592)
Q Consensus 227 ~~~s~p~--~~e~eav~~~i~la~~~~~pl~i~hv~ 260 (592)
..++ +...+.+.+.+.+|...|++..++|..
T Consensus 79 ---~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g 111 (285)
T 1qtw_A 79 ---PVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPG 111 (285)
T ss_dssp ---SSHHHHHHHHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHcCCCEEEECcC
Confidence 0111 122356778999999999999888865
No 145
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=36.85 E-value=1.5e+02 Score=28.84 Aligned_cols=105 Identities=12% Similarity=0.058 Sum_probs=59.9
Q ss_pred HHHHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEecC--chhhhHHHHHHHHHcCCCCCC--C
Q psy6858 154 QEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAE--NGEIIDKNTQKLLAAGIKGPE--G 226 (592)
Q Consensus 154 ~~~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae--~~~~i~~~~~~~~~~G~~~p~--~ 226 (592)
+++-+...+.|+.++-+.-+-.-...++.+|-.++++.+.+. ..++.+++. +.....+..+.+.+.|.++.- -
T Consensus 27 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 106 (294)
T 3b4u_A 27 IAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAP 106 (294)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcC
Confidence 333333334688877654333334568888888888877764 245666653 233334455666677765421 1
Q ss_pred ccCCC-cHHHHHHHHHHHHHHhccc---CCCEEEEecc
Q psy6858 227 HQLSR-PEEVEAEAVTRACTIANQV---DCPLYVVHIM 260 (592)
Q Consensus 227 ~~~s~-p~~~e~eav~~~i~la~~~---~~pl~i~hv~ 260 (592)
..+.. |.+- +.+..--.+++.. +.|+.+.++-
T Consensus 107 P~y~~~~s~~--~l~~~f~~va~a~p~~~lPiilYn~P 142 (294)
T 3b4u_A 107 PSYFKNVSDD--GLFAWFSAVFSKIGKDARDILVYNIP 142 (294)
T ss_dssp CCSSCSCCHH--HHHHHHHHHHHHHCTTCCCEEEEECH
T ss_pred CcCCCCCCHH--HHHHHHHHHHHhcCCCCCcEEEEECc
Confidence 12233 3332 3344445567777 8999998865
No 146
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=36.69 E-value=1.5e+02 Score=29.61 Aligned_cols=98 Identities=14% Similarity=0.080 Sum_probs=54.9
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEecC--chhhhHHHHHHHHHcCCCCCC--CccCCCcHH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAE--NGEIIDKNTQKLLAAGIKGPE--GHQLSRPEE 234 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae--~~~~i~~~~~~~~~~G~~~p~--~~~~s~p~~ 234 (592)
+.|+.++-+.-+-.-...++.+|-.++++.+.+. .+++.+++. +.....+..+.+.+.|.++.- -..+..|.+
T Consensus 63 ~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~ 142 (343)
T 2v9d_A 63 KAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYYWKVSE 142 (343)
T ss_dssp HTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECCSSSCCCH
T ss_pred HcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCH
Confidence 4577776544332234567887777777665543 356767753 223333445556666765421 112233433
Q ss_pred HHHHHHHHHHHHhcccCCCEEEEeccc
Q psy6858 235 VEAEAVTRACTIANQVDCPLYVVHIMS 261 (592)
Q Consensus 235 ~e~eav~~~i~la~~~~~pl~i~hv~s 261 (592)
- +.+..--.+++..+.|+.+.++-.
T Consensus 143 ~--~l~~~f~~VA~a~~lPiilYn~P~ 167 (343)
T 2v9d_A 143 A--NLIRYFEQVADSVTLPVMLYNFPA 167 (343)
T ss_dssp H--HHHHHHHHHHHTCSSCEEEEECHH
T ss_pred H--HHHHHHHHHHHhcCCCEEEEeCch
Confidence 2 333444457777899999988753
No 147
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=36.38 E-value=1.9e+02 Score=28.53 Aligned_cols=111 Identities=8% Similarity=0.064 Sum_probs=61.0
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEecC--chhhhHHHHHHHHHcCCCCCCC---ccCCCcH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAE--NGEIIDKNTQKLLAAGIKGPEG---HQLSRPE 233 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae--~~~~i~~~~~~~~~~G~~~p~~---~~~s~p~ 233 (592)
+.|+.++-+.-+-.-...++.+|-.++++.+.+. .+++.+++. +.....+..+.+.+.|.++.-- +++..|.
T Consensus 43 ~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~kp~ 122 (318)
T 3qfe_A 43 RSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPAYFGKAT 122 (318)
T ss_dssp TTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC---CC
T ss_pred HcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCC
Confidence 4688877655443344567888877777776653 356777753 3333344556666777654221 1122221
Q ss_pred HHHHHHHHHHHHHhcccCCCEEEEecccHH-----HHHHHHHHHH
Q psy6858 234 EVEAEAVTRACTIANQVDCPLYVVHIMSKA-----AGDAMAYKRK 273 (592)
Q Consensus 234 ~~e~eav~~~i~la~~~~~pl~i~hv~s~~-----a~~~i~~ar~ 273 (592)
.+.+.+..-..+++..+.|+.+.++-... ..+.+.++.+
T Consensus 123 -~~~~l~~~f~~ia~a~~lPiilYn~P~~t~g~~l~~~~~~~La~ 166 (318)
T 3qfe_A 123 -TPPVIKSFFDDVSCQSPLPVVIYNFPGVCNGIDLDSDMITTIAR 166 (318)
T ss_dssp -CHHHHHHHHHHHHHHCSSCEEEEECCC----CCCCHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHhhCCCCEEEEeCCcccCCCCCCHHHHHHHHh
Confidence 01233444555777789999999986432 2355555443
No 148
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=36.32 E-value=3.3e+02 Score=26.97 Aligned_cols=117 Identities=15% Similarity=0.095 Sum_probs=61.1
Q ss_pred CChhhHHHHHHHHHcCCeeEEeccccCCCC--ccHHHHHHHHHHH---h-ccCce--eeeeccc-ccc---C-CChHHHH
Q psy6858 88 TSVDDFYHGTKAAVAGGTTTIIDFALPRKG--ESLIKTYESWRQK---A-DEKVC--CDYALHV-GIT---W-WSDQVQQ 154 (592)
Q Consensus 88 ~~~d~~~~~~~~ala~GtTti~d~~~~~~~--~~~~~a~~~~~~~---~-~~~~~--~~~~~~~-~~~---~-~~~~~~~ 154 (592)
...++.....+.|+..|++.| |....-.. ....+.+-++... . ..... .-.+... ... . -.+.+.+
T Consensus 61 ~~~~~~~~~l~~Al~~Gi~~~-DTA~~Yg~~~G~sE~~lG~al~~~~~~~R~~v~I~TK~g~~~~~~~~~~~~s~~~i~~ 139 (353)
T 3erp_A 61 TRVENSRALLQRAFDLGITHF-DLANNYGPPPGSAECNFGRILQEDFLPWRDELIISTKAGYTMWDGPYGDWGSRKYLIA 139 (353)
T ss_dssp SCHHHHHHHHHHHHHTTCCEE-ECCTTCTTTTTHHHHHHHHHHHHHTGGGGGGCEEEEEESSCCSSSTTSSTTCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEE-EChhhhCCCCChHHHHHHHHHHhhccCCCCeEEEEeeeccCCCCCcccCCCCHHHHHH
Confidence 355667778889999999987 55321111 0112222222221 0 11111 1222110 000 0 1134556
Q ss_pred HHHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCc
Q psy6858 155 EMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAEN 205 (592)
Q Consensus 155 ~~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (592)
.+++-++.-|...+-+|+--.-......++..+.++.+++.|..-.+=..|
T Consensus 140 ~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~aL~~l~~~Gkir~iGvSn 190 (353)
T 3erp_A 140 SLDQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHGKALYVGISN 190 (353)
T ss_dssp HHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred HHHHHHHHhCCCeEeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEecC
Confidence 677777777988888776321122334567778888888888765555544
No 149
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=36.25 E-value=1.5e+02 Score=29.12 Aligned_cols=97 Identities=12% Similarity=0.087 Sum_probs=55.2
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEecC--chhhhHHHHHHHHHcCC-CCCC--CccCCCcH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAE--NGEIIDKNTQKLLAAGI-KGPE--GHQLSRPE 233 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae--~~~~i~~~~~~~~~~G~-~~p~--~~~~s~p~ 233 (592)
+.|+.++-+.-+-.....++.+|-.++++.+.+. ..++.++.. +.....+..+.+.+.|. .+.- -..+..|.
T Consensus 39 ~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~P~y~~~s 118 (311)
T 3h5d_A 39 AHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVPYYNKPS 118 (311)
T ss_dssp HTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEECCCSSCCC
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcCCCCCCCC
Confidence 4577776554333334567888877777777664 356777753 22223344455556564 3211 11222343
Q ss_pred HHHHHHHHHHHHHhcccCCCEEEEecc
Q psy6858 234 EVEAEAVTRACTIANQVDCPLYVVHIM 260 (592)
Q Consensus 234 ~~e~eav~~~i~la~~~~~pl~i~hv~ 260 (592)
+- +.+..--.+++..+.|+.+.++-
T Consensus 119 ~~--~l~~~f~~va~a~~lPiilYn~P 143 (311)
T 3h5d_A 119 QE--GMYQHFKAIADASDLPIIIYNIP 143 (311)
T ss_dssp HH--HHHHHHHHHHHSCSSCEEEEECH
T ss_pred HH--HHHHHHHHHHHhCCCCEEEEecc
Confidence 32 34445556777789999999875
No 150
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=36.16 E-value=1.2e+02 Score=29.50 Aligned_cols=97 Identities=13% Similarity=0.040 Sum_probs=54.2
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEecCc--hhhhHHHHHHHHHcCCCCCC--CccCCCcHH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAEN--GEIIDKNTQKLLAAGIKGPE--GHQLSRPEE 234 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae~--~~~i~~~~~~~~~~G~~~p~--~~~~s~p~~ 234 (592)
+.|++++-+.-+-.-...++.+|-.++++.+.+. ..++.+++.. .....+..+.+.+.|.++.- -..+..|.+
T Consensus 32 ~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~ 111 (292)
T 2vc6_A 32 EEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYNKPTQ 111 (292)
T ss_dssp HTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCH
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCH
Confidence 4577776543332234467888877777766653 3566667532 22233445556667765421 112333433
Q ss_pred HHHHHHHHHHHHhcccCCCEEEEecc
Q psy6858 235 VEAEAVTRACTIANQVDCPLYVVHIM 260 (592)
Q Consensus 235 ~e~eav~~~i~la~~~~~pl~i~hv~ 260 (592)
- +.+..--.+++..+.|+.+.++-
T Consensus 112 ~--~l~~~f~~ia~a~~lPiilYn~P 135 (292)
T 2vc6_A 112 E--GIYQHFKAIDAASTIPIIVYNIP 135 (292)
T ss_dssp H--HHHHHHHHHHHHCSSCEEEEECH
T ss_pred H--HHHHHHHHHHHhCCCCEEEEeCc
Confidence 2 33334445677789999998865
No 151
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=35.82 E-value=1.7e+02 Score=28.53 Aligned_cols=97 Identities=11% Similarity=0.036 Sum_probs=52.6
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEecCc--hhhhHHHHHHHHHcCCCCCC--CccCCCcHH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAEN--GEIIDKNTQKLLAAGIKGPE--GHQLSRPEE 234 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae~--~~~i~~~~~~~~~~G~~~p~--~~~~s~p~~ 234 (592)
+.|+.++-+.-+-.-...++.+|-.++++.+.+. .+++.+++.. .....+..+.+.+.|.++.- -..+..|.+
T Consensus 43 ~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~ 122 (303)
T 2wkj_A 43 QQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSF 122 (303)
T ss_dssp HTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCH
T ss_pred HcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCCCCCCH
Confidence 4577776544332234457777777776665542 3567777532 22233445556666765421 112233333
Q ss_pred HHHHHHHHHHHHhcccC-CCEEEEecc
Q psy6858 235 VEAEAVTRACTIANQVD-CPLYVVHIM 260 (592)
Q Consensus 235 ~e~eav~~~i~la~~~~-~pl~i~hv~ 260 (592)
- +.+..-..+++..+ .|+.+.++-
T Consensus 123 ~--~l~~~f~~va~a~~~lPiilYn~P 147 (303)
T 2wkj_A 123 E--EHCDHYRAIIDSADGLPMVVYNIP 147 (303)
T ss_dssp H--HHHHHHHHHHHHHTTCCEEEEECH
T ss_pred H--HHHHHHHHHHHhCCCCCEEEEeCc
Confidence 2 33334445667777 999998864
No 152
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=35.82 E-value=1.5e+02 Score=28.68 Aligned_cols=98 Identities=12% Similarity=0.010 Sum_probs=53.9
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecC--chhhhHHHHHHHHHcCCCCCC--CccCCC-cHHHH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAE--NGEIIDKNTQKLLAAGIKGPE--GHQLSR-PEEVE 236 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae--~~~~i~~~~~~~~~~G~~~p~--~~~~s~-p~~~e 236 (592)
+.|++++-+.-+-.-...++.+|-.++++.+.+.-.-+.+++. +.....+..+.+.+.|.++.- -..+.. |.+-
T Consensus 30 ~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~gvi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~- 108 (286)
T 2r91_A 30 SKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARRVIVQVASLNADEAIALAKYAESRGAEAVASLPPYYFPRLSER- 108 (286)
T ss_dssp HTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSSEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCSSTTCCHH-
T ss_pred HCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCEEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHH-
Confidence 4688776544332234567888877777776654221555542 233333445566666765421 112223 3332
Q ss_pred HHHHHHHHHHhcccCCCEEEEeccc
Q psy6858 237 AEAVTRACTIANQVDCPLYVVHIMS 261 (592)
Q Consensus 237 ~eav~~~i~la~~~~~pl~i~hv~s 261 (592)
+.+..-..+++..+.|+.+.++-.
T Consensus 109 -~l~~~f~~va~a~~lPiilYn~P~ 132 (286)
T 2r91_A 109 -QIAKYFRDLCSAVSIPVFLYNYPA 132 (286)
T ss_dssp -HHHHHHHHHHHHCSSCEEEEECHH
T ss_pred -HHHHHHHHHHHhcCCCEEEEeChh
Confidence 333444456777899999988743
No 153
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=35.51 E-value=1.8e+02 Score=28.25 Aligned_cols=96 Identities=14% Similarity=-0.028 Sum_probs=54.3
Q ss_pred cCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEecCc--hhhhHHHHHHHHHcCCCCCC--CccCCCcHHH
Q psy6858 163 HGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAEN--GEIIDKNTQKLLAAGIKGPE--GHQLSRPEEV 235 (592)
Q Consensus 163 ~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae~--~~~i~~~~~~~~~~G~~~p~--~~~~s~p~~~ 235 (592)
.|++++-+.-+-.-...++.+|-.++++.+.+. ..++.+++.. .....+..+.+.+.|.++.- -..+..|.+-
T Consensus 37 ~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~ 116 (293)
T 1f6k_A 37 MKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFP 116 (293)
T ss_dssp SCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHH
T ss_pred CCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHH
Confidence 588776554333334567888877777766542 3567777532 23233445566666765421 1122333332
Q ss_pred HHHHHHHHHHHhcccCCCEEEEecc
Q psy6858 236 EAEAVTRACTIANQVDCPLYVVHIM 260 (592)
Q Consensus 236 e~eav~~~i~la~~~~~pl~i~hv~ 260 (592)
+.+..--.+++..+.|+.+.++-
T Consensus 117 --~l~~~f~~va~a~~lPiilYn~P 139 (293)
T 1f6k_A 117 --EIKHYYDTIIAETGSNMIVYSIP 139 (293)
T ss_dssp --HHHHHHHHHHHHHCCCEEEEECH
T ss_pred --HHHHHHHHHHHhCCCCEEEEECc
Confidence 33444445677778999998864
No 154
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=34.38 E-value=4.2e+02 Score=27.60 Aligned_cols=126 Identities=13% Similarity=0.063 Sum_probs=71.8
Q ss_pred HHHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChHHHHHHHHHHHHcCCcEEEEEEe
Q psy6858 94 YHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMA 173 (592)
Q Consensus 94 ~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~Gv~~~k~~~~ 173 (592)
..-.+.+++.|+..|.=+...+.-..+.++++..++... ...+..++. .....+.+..-++.+.+.+.|+..+.+--
T Consensus 103 ~~~v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~G~-~v~~~i~~~-~~~~~~~e~~~~~a~~l~~~Gad~I~l~D- 179 (464)
T 2nx9_A 103 DTFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMGA-HAQGTLCYT-TSPVHNLQTWVDVAQQLAELGVDSIALKD- 179 (464)
T ss_dssp HHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTC-EEEEEEECC-CCTTCCHHHHHHHHHHHHHTTCSEEEEEE-
T ss_pred HHHHHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHHCCC-EEEEEEEee-eCCCCCHHHHHHHHHHHHHCCCCEEEEcC-
Confidence 344667788999887644333333334444444443322 222233222 22334555555555555567988665432
Q ss_pred eCCCcCCCHHHHHHHHHHHHH-cCCeEEEecCchhh-hHHHHHHHHHcCCCCC
Q psy6858 174 YKGLYMLSDGELYDAFSAIKN-LGAIAMVHAENGEI-IDKNTQKLLAAGIKGP 224 (592)
Q Consensus 174 ~~~~~~~~~~~l~~~~~~a~~-~g~~~~vHae~~~~-i~~~~~~~~~~G~~~p 224 (592)
....+++.+++++++..++ .++++.+|+.|..- ........++.|++..
T Consensus 180 --T~G~~~P~~v~~lv~~l~~~~~~~i~~H~Hnd~GlAvAN~laAv~AGa~~V 230 (464)
T 2nx9_A 180 --MAGILTPYAAEELVSTLKKQVDVELHLHCHSTAGLADMTLLKAIEAGVDRV 230 (464)
T ss_dssp --TTSCCCHHHHHHHHHHHHHHCCSCEEEEECCTTSCHHHHHHHHHHTTCSEE
T ss_pred --CCCCcCHHHHHHHHHHHHHhcCCeEEEEECCCCChHHHHHHHHHHhCCCEE
Confidence 2234689999999988765 58899999876432 2234455667776543
No 155
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=34.08 E-value=1.6e+02 Score=28.64 Aligned_cols=98 Identities=15% Similarity=0.138 Sum_probs=55.8
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEecCc--hhhhHHHHHHHHHcCCCCCC--CccCCCcHH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAEN--GEIIDKNTQKLLAAGIKGPE--GHQLSRPEE 234 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae~--~~~i~~~~~~~~~~G~~~p~--~~~~s~p~~ 234 (592)
+.|+.++-+.-+-.-...++.+|-.++++.+.+. ..++.+++.. .....+..+.+.+.|.++.- -..+..|.+
T Consensus 32 ~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~ 111 (297)
T 2rfg_A 32 KHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYYNRPSQ 111 (297)
T ss_dssp HTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTTCCCH
T ss_pred HcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCH
Confidence 4688876544333334567888877777766542 3567777532 23333445666667765421 112233433
Q ss_pred HHHHHHHHHHHHhcccCCCEEEEeccc
Q psy6858 235 VEAEAVTRACTIANQVDCPLYVVHIMS 261 (592)
Q Consensus 235 ~e~eav~~~i~la~~~~~pl~i~hv~s 261 (592)
- +.+..--.+++..+.|+.+.++-.
T Consensus 112 ~--~l~~~f~~va~a~~lPiilYn~P~ 136 (297)
T 2rfg_A 112 E--GLYQHFKMVHDAIDIPIIVYNIPP 136 (297)
T ss_dssp H--HHHHHHHHHHHHCSSCEEEEECHH
T ss_pred H--HHHHHHHHHHHhcCCCEEEEeCcc
Confidence 2 333444456777899999988653
No 156
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=34.08 E-value=1.3e+02 Score=29.24 Aligned_cols=98 Identities=17% Similarity=0.121 Sum_probs=55.4
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEecCc--hhhhHHHHHHHHHcCCCCCC--CccCCCcHH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAEN--GEIIDKNTQKLLAAGIKGPE--GHQLSRPEE 234 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae~--~~~i~~~~~~~~~~G~~~p~--~~~~s~p~~ 234 (592)
+.|+.++-+.-+-.-...++.+|-.++++.+.+. ..++.+++.. .....+..+.+.+.|.++.- -..+..|.+
T Consensus 33 ~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~ 112 (292)
T 2ojp_A 33 ASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQ 112 (292)
T ss_dssp HHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECCCSSCCCH
T ss_pred HcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCH
Confidence 4588877654333334568888887777776653 3667777533 22222334444455554311 112333433
Q ss_pred HHHHHHHHHHHHhcccCCCEEEEeccc
Q psy6858 235 VEAEAVTRACTIANQVDCPLYVVHIMS 261 (592)
Q Consensus 235 ~e~eav~~~i~la~~~~~pl~i~hv~s 261 (592)
- +.+..--.+++..+.|+.+.++-.
T Consensus 113 ~--~l~~~f~~ia~a~~lPiilYn~P~ 137 (292)
T 2ojp_A 113 E--GLYQHFKAIAEHTDLPQILYNVPS 137 (292)
T ss_dssp H--HHHHHHHHHHTTCSSCEEEECCHH
T ss_pred H--HHHHHHHHHHHhcCCCEEEEeCcc
Confidence 2 334445567788899999988643
No 157
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=34.00 E-value=2.8e+02 Score=26.86 Aligned_cols=57 Identities=18% Similarity=0.053 Sum_probs=40.8
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc--CCeEEEecCch
Q psy6858 147 WWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL--GAIAMVHAENG 206 (592)
Q Consensus 147 ~~~~~~~~~~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~--g~~~~vHae~~ 206 (592)
.++.+...++.+.+.+.|+..+.+.-. ...+++.+++++++..++. +.++.+|+.|.
T Consensus 152 ~~~~~~~~~~~~~~~~~Ga~~i~l~DT---~G~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~ 210 (298)
T 2cw6_A 152 KISPAKVAEVTKKFYSMGCYEISLGDT---IGVGTPGIMKDMLSAVMQEVPLAALAVHCHDT 210 (298)
T ss_dssp SCCHHHHHHHHHHHHHTTCSEEEEEET---TSCCCHHHHHHHHHHHHHHSCGGGEEEEEBCT
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEecCC---CCCcCHHHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 345566666666666789987765432 3357899999999888764 47899998875
No 158
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=33.61 E-value=99 Score=30.52 Aligned_cols=96 Identities=14% Similarity=0.021 Sum_probs=47.1
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEecCc-hhhhHHHHHHHHHcCCCCCCC--ccCCCcHHH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAEN-GEIIDKNTQKLLAAGIKGPEG--HQLSRPEEV 235 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae~-~~~i~~~~~~~~~~G~~~p~~--~~~s~p~~~ 235 (592)
+.|+.++-+.-+-.-...++.+|-.++++.+.+. .+++.+++.+ .....+..+.+.+.|.++.-- ..+..|.+-
T Consensus 44 ~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~ 123 (316)
T 3e96_A 44 DNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAGADAVMIHMPIHPYVTAG 123 (316)
T ss_dssp TTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHTCSEEEECCCCCSCCCHH
T ss_pred HcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHH
Confidence 3466655433222223456666666666655443 3556666432 111223344455556543210 112233322
Q ss_pred HHHHHHHHHHHhcccCCCEEEEec
Q psy6858 236 EAEAVTRACTIANQVDCPLYVVHI 259 (592)
Q Consensus 236 e~eav~~~i~la~~~~~pl~i~hv 259 (592)
+.+..--.+++..+.|+.+.+.
T Consensus 124 --~l~~~f~~va~a~~lPiilYn~ 145 (316)
T 3e96_A 124 --GVYAYFRDIIEALDFPSLVYFK 145 (316)
T ss_dssp --HHHHHHHHHHHHHTSCEEEEEC
T ss_pred --HHHHHHHHHHHhCCCCEEEEeC
Confidence 3344445567777899999885
No 159
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=32.72 E-value=3.1e+02 Score=25.58 Aligned_cols=86 Identities=16% Similarity=0.147 Sum_probs=55.1
Q ss_pred HHHHHHcCCcEEEEEEeeCCC---cCCCHHHHHHHHHHHHHcCCe---EEEecCchhhhHHHHHHHHHcCCCCCCCccCC
Q psy6858 157 AELCEKHGVNSFKTFMAYKGL---YMLSDGELYDAFSAIKNLGAI---AMVHAENGEIIDKNTQKLLAAGIKGPEGHQLS 230 (592)
Q Consensus 157 ~~lv~~~Gv~~~k~~~~~~~~---~~~~~~~l~~~~~~a~~~g~~---~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s 230 (592)
-+.+++.|...+.++...... ..++++.+.++.+.++++|+. +.+|+...- .+.. .
T Consensus 18 l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~h~~~~~------------~~~~------~ 79 (287)
T 2x7v_A 18 PQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDWENAFCHSGYLI------------NLAS------P 79 (287)
T ss_dssp HHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCCGGGEEEECCTTC------------CTTC------S
T ss_pred HHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCCCcceeEEeccccc------------ccCC------C
Confidence 334456799998876432111 135678899999999999998 788864210 0000 0
Q ss_pred CcH--HHHHHHHHHHHHHhcccCCCEEEEecc
Q psy6858 231 RPE--EVEAEAVTRACTIANQVDCPLYVVHIM 260 (592)
Q Consensus 231 ~p~--~~e~eav~~~i~la~~~~~pl~i~hv~ 260 (592)
.++ +...+.+.+.+.+|+..|++..++|..
T Consensus 80 ~~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~g 111 (287)
T 2x7v_A 80 KDDIWQKSVELLKKEVEICRKLGIRYLNIHPG 111 (287)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCCEEEECCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 111 122356778999999999998888865
No 160
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=32.41 E-value=1.4e+02 Score=28.90 Aligned_cols=99 Identities=7% Similarity=0.051 Sum_probs=56.4
Q ss_pred HHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEecCc--hhhhHHHHHHHHHcCCCCCC--CccCCCcH
Q psy6858 161 EKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAEN--GEIIDKNTQKLLAAGIKGPE--GHQLSRPE 233 (592)
Q Consensus 161 ~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae~--~~~i~~~~~~~~~~G~~~p~--~~~~s~p~ 233 (592)
.+.|++++-+.-+-.-...++.+|-.++++.+.+. ..++.+++.. .....+..+.+.+.|.++.- -..+..|.
T Consensus 32 i~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s 111 (291)
T 3a5f_A 32 IKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITPYYNKTT 111 (291)
T ss_dssp HHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCC
T ss_pred HHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCCCCCCCC
Confidence 34688876554333334567888877777766642 3667777532 23333445666677765421 11223343
Q ss_pred HHHHHHHHHHHHHhcccCCCEEEEeccc
Q psy6858 234 EVEAEAVTRACTIANQVDCPLYVVHIMS 261 (592)
Q Consensus 234 ~~e~eav~~~i~la~~~~~pl~i~hv~s 261 (592)
+- +.+..--.+++..+.|+.+.++-.
T Consensus 112 ~~--~l~~~f~~ia~a~~lPiilYn~P~ 137 (291)
T 3a5f_A 112 QK--GLVKHFKAVSDAVSTPIIIYNVPG 137 (291)
T ss_dssp HH--HHHHHC-CTGGGCCSCEEEEECHH
T ss_pred HH--HHHHHHHHHHHhcCCCEEEEeCcc
Confidence 32 333444457788899999988653
No 161
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=32.16 E-value=22 Score=33.84 Aligned_cols=37 Identities=22% Similarity=0.208 Sum_probs=26.1
Q ss_pred ccccCcCcccccCCCCChhhHHHHHHHHHcCCeeEEe--ccc
Q psy6858 73 GIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTII--DFA 112 (592)
Q Consensus 73 ~ID~HtH~~~~~~~~~~~d~~~~~~~~ala~GtTti~--d~~ 112 (592)
+||.|+|...+..+..+.++ ..+.|.+.|++.+. ||.
T Consensus 1 ~~DlH~Ht~~S~DG~~~~ee---~v~~A~~~Gl~~iaiTDH~ 39 (267)
T 2yxo_A 1 MVDSHVHTPLCGHAEGHPEA---YLEEARAKGLKGVVFTDHS 39 (267)
T ss_dssp CEEEEECCGGGSSCCSCHHH---HHHHHHHTTCSEEEEEEEC
T ss_pred CCccCcCcCCCCCCCCCHHH---HHHHHHHcCCCEEEEcCCC
Confidence 48999999655445555554 47888999998763 553
No 162
>3ly0_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, nysgrc, target 9523C, phosphinate inhibitor, PSI-2; HET: LY0; 1.40A {Rhodobacter sphaeroides} PDB: 3fdg_A
Probab=32.12 E-value=3.1e+02 Score=27.67 Aligned_cols=56 Identities=16% Similarity=0.093 Sum_probs=37.5
Q ss_pred CC-ceEEeCCCCCCChhhhhcCCCCCCcCCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcCC
Q psy6858 333 NA-LQTTGSDNCTFNKNQKELGKDSFTHIPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFNL 403 (592)
Q Consensus 333 G~-~~~~gsD~~~~~~~~~~~g~~~f~~~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lgl 403 (592)
|+ .+.+|||..-. ..|.|+..+.. ++.+.+.+... +++.+++-+++-.|.-+.|.-
T Consensus 297 G~dhVgiGsDfdG~-------------~~p~gl~d~s~-~p~L~~~L~~r-G~se~~i~ki~g~N~lRvl~~ 353 (364)
T 3ly0_A 297 GEDHVGMGSDFDGA-------------TIPQGIADVTG-LPALQAAMRAH-GYDEPLMRKLCHENWYGLLER 353 (364)
T ss_dssp CTTSEEECCCBTTS-------------CCCTTTCSGGG-HHHHHHHHHHH-TCCHHHHHHHHTHHHHHHHHH
T ss_pred CCCeEEECCCCCCC-------------CCCCCCCCHHH-HHHHHHHHHHC-CCCHHHHHHHHhHhHHHHHHH
Confidence 54 69999997422 13444444333 45555545443 589999999999999988864
No 163
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=31.89 E-value=3.5e+02 Score=26.68 Aligned_cols=41 Identities=15% Similarity=0.144 Sum_probs=27.8
Q ss_pred CCCCCcchhhHHHHHHHhhccCCCCCHHHHHHHHhHhHHHHcC
Q psy6858 360 IPNGVNGVQDRLSVIWEKGVVPGILSPEKFVAVTSTNAAKIFN 402 (592)
Q Consensus 360 ~p~G~~g~e~~~~~~~~~~v~~~~l~~~e~v~~~T~n~Ak~lg 402 (592)
.|.|...+. .++.+.+.+.. .+++.+++-+++-.|..+.|.
T Consensus 280 ~~~gl~~~~-~~~~l~~~L~~-~G~se~~i~ki~g~N~lRvl~ 320 (325)
T 2i5g_A 280 NPLGIRTVG-EFPNLTETLLK-RGMPERVVRKVMGENWVRVLR 320 (325)
T ss_dssp CCBTCSSGG-GTHHHHHHHHH-TTCCHHHHHHHHTHHHHHHHH
T ss_pred CcccCCCHH-HHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHH
Confidence 344544443 44555554444 458999999999999999874
No 164
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=31.58 E-value=3.9e+02 Score=26.41 Aligned_cols=120 Identities=15% Similarity=0.025 Sum_probs=64.6
Q ss_pred HHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChHHHHHHHHHHHHcCCcEEEEEEeeCC
Q psy6858 97 TKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGVNSFKTFMAYKG 176 (592)
Q Consensus 97 ~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~Gv~~~k~~~~~~~ 176 (592)
.+.+++.|+..++=+...+..+...+..+..++.. ..+.+.+. ..+..+++...++.+.+.+.|+..+.+. + .
T Consensus 99 i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~G---~~v~~~~~-~a~~~~~e~~~~ia~~~~~~Ga~~i~l~-D--T 171 (345)
T 1nvm_A 99 LKNAYQAGARVVRVATHCTEADVSKQHIEYARNLG---MDTVGFLM-MSHMIPAEKLAEQGKLMESYGATCIYMA-D--S 171 (345)
T ss_dssp HHHHHHHTCCEEEEEEETTCGGGGHHHHHHHHHHT---CEEEEEEE-STTSSCHHHHHHHHHHHHHHTCSEEEEE-C--T
T ss_pred HHHHHhCCcCEEEEEEeccHHHHHHHHHHHHHHCC---CEEEEEEE-eCCCCCHHHHHHHHHHHHHCCCCEEEEC-C--C
Confidence 45566667777643322222233444444444332 22222221 2234455556666666666788765432 1 2
Q ss_pred CcCCCHHHHHHHHHHHHHc---CCeEEEecCchhh-hHHHHHHHHHcCCCC
Q psy6858 177 LYMLSDGELYDAFSAIKNL---GAIAMVHAENGEI-IDKNTQKLLAAGIKG 223 (592)
Q Consensus 177 ~~~~~~~~l~~~~~~a~~~---g~~~~vHae~~~~-i~~~~~~~~~~G~~~ 223 (592)
....++.++.++++..++. ++++.+|+.|..- ........++.|+..
T Consensus 172 ~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aGa~~ 222 (345)
T 1nvm_A 172 GGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCDR 222 (345)
T ss_dssp TCCCCHHHHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTTCCE
T ss_pred cCccCHHHHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcCCCE
Confidence 2345789999999888764 5899999877432 222334445566443
No 165
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=29.55 E-value=1.5e+02 Score=28.77 Aligned_cols=98 Identities=13% Similarity=-0.006 Sum_probs=52.1
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecC--chhhhHHHHHHHHHcCCCCCC--CccCCC-cHHHH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAE--NGEIIDKNTQKLLAAGIKGPE--GHQLSR-PEEVE 236 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae--~~~~i~~~~~~~~~~G~~~p~--~~~~s~-p~~~e 236 (592)
+.|++++-+.-+-.-...++.+|-.++++.+.+.-.-+.++.. +.....+..+.+.+.|.++.- -..+.. |.+-
T Consensus 31 ~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~gViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~- 109 (288)
T 2nuw_A 31 EKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHKLIFQVGSLNLNDVMELVKFSNEMDILGVSSHSPYYFPRLPEK- 109 (288)
T ss_dssp HTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSCEEEECCCSCHHHHHHHHHHHHTSCCSEEEECCCCSSCSCCHH-
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCeEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHH-
Confidence 4577766544332234557777777777777654221445542 222233344555556655411 112223 4332
Q ss_pred HHHHHHHHHHhcccCCCEEEEeccc
Q psy6858 237 AEAVTRACTIANQVDCPLYVVHIMS 261 (592)
Q Consensus 237 ~eav~~~i~la~~~~~pl~i~hv~s 261 (592)
+.+..-..+++..+.|+.+.++-.
T Consensus 110 -~l~~~f~~va~a~~lPiilYn~P~ 133 (288)
T 2nuw_A 110 -FLAKYYEEIARISSHSLYIYNYPA 133 (288)
T ss_dssp -HHHHHHHHHHHHCCSCEEEEECHH
T ss_pred -HHHHHHHHHHHhcCCCEEEEECch
Confidence 333444456777899999988743
No 166
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=29.49 E-value=5e+02 Score=27.00 Aligned_cols=178 Identities=21% Similarity=0.207 Sum_probs=97.7
Q ss_pred CChhhHHHHHHHHHcCCeeEEeccccCCC--------CccHHHHHHHHHHHhccCceeeeecc----ccccCCChHHHHH
Q psy6858 88 TSVDDFYHGTKAAVAGGTTTIIDFALPRK--------GESLIKTYESWRQKADEKVCCDYALH----VGITWWSDQVQQE 155 (592)
Q Consensus 88 ~~~d~~~~~~~~ala~GtTti~d~~~~~~--------~~~~~~a~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 155 (592)
++.++...-++...+.|+..|- ...+.. .++..+.++.++.... ......-.. .+.....+.+.+.
T Consensus 27 ~~~~dkl~Ia~~L~~~Gv~~IE-~g~~atF~~~~r~~~~d~~e~l~~i~~~~~-~~~l~~l~R~~N~~G~~~~~ddv~~~ 104 (464)
T 2nx9_A 27 LRIDDMLPIAQQLDQIGYWSLE-CWGGATFDSCIRFLGEDPWQRLRLLKQAMP-NTPLQMLLRGQNLLGYRHYADDVVDT 104 (464)
T ss_dssp CCGGGTGGGHHHHHTSCCSEEE-EEETTHHHHHHHTTCCCHHHHHHHHHHHCS-SSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEE-eCcCccccchhhccCCCHHHHHHHHHHhCC-CCeEEEEeccccccCcccccchhhHH
Confidence 4556655556677778999884 322221 3455566666665422 222111111 1223334554444
Q ss_pred HHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEE--EecC-----chhhhHHHHHHHHHcCCCCCC---
Q psy6858 156 MAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAM--VHAE-----NGEIIDKNTQKLLAAGIKGPE--- 225 (592)
Q Consensus 156 ~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~--vHae-----~~~~i~~~~~~~~~~G~~~p~--- 225 (592)
.-+.+.+.|+..+.+|.+... .+.+.+.++.+++.|..+. +|.+ +.+...+..+.+.+.|.....
T Consensus 105 ~v~~a~~~Gvd~i~if~~~sd-----~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~D 179 (464)
T 2nx9_A 105 FVERAVKNGMDVFRVFDAMND-----VRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALKD 179 (464)
T ss_dssp HHHHHHHTTCCEEEECCTTCC-----THHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHhCCcCEEEEEEecCH-----HHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcC
Confidence 444445679999998865322 2678999999999999874 4443 335556667888888875321
Q ss_pred CccCCCcHHHHHHHHHHHHHHhcccCCCEEEE-ecccHHHHHHHHHHHHHHHhcCC
Q psy6858 226 GHQLSRPEEVEAEAVTRACTIANQVDCPLYVV-HIMSKAAGDAMAYKRKELMKKGK 280 (592)
Q Consensus 226 ~~~~s~p~~~e~eav~~~i~la~~~~~pl~i~-hv~s~~a~~~i~~ar~~~~~~G~ 280 (592)
.--...|.++. +.+.... +..++|++++ |-...-+..-.-.|-+. |+
T Consensus 180 T~G~~~P~~v~-~lv~~l~---~~~~~~i~~H~Hnd~GlAvAN~laAv~A----Ga 227 (464)
T 2nx9_A 180 MAGILTPYAAE-ELVSTLK---KQVDVELHLHCHSTAGLADMTLLKAIEA----GV 227 (464)
T ss_dssp TTSCCCHHHHH-HHHHHHH---HHCCSCEEEEECCTTSCHHHHHHHHHHT----TC
T ss_pred CCCCcCHHHHH-HHHHHHH---HhcCCeEEEEECCCCChHHHHHHHHHHh----CC
Confidence 12245677664 3333322 3347787762 33333333333333344 87
No 167
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=29.38 E-value=28 Score=32.73 Aligned_cols=37 Identities=19% Similarity=0.186 Sum_probs=25.0
Q ss_pred ccccCcCcccccCCCCChhhHHHHHHHHHcCCeeEE--eccc
Q psy6858 73 GIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTI--IDFA 112 (592)
Q Consensus 73 ~ID~HtH~~~~~~~~~~~d~~~~~~~~ala~GtTti--~d~~ 112 (592)
++|.|+|...+..+..++++ -.+.|.+.|++.+ .||.
T Consensus 3 ~~DlH~Ht~~Sd~g~~~~~e---~v~~A~~~Gl~~iaiTDH~ 41 (245)
T 1m65_A 3 PVDLHMHTVASTHAYSTLSD---YIAQAKQKGIKLFAITDHG 41 (245)
T ss_dssp CEECCBCCTTSTTCCCCHHH---HHHHHHHHTCCEEEEEEEC
T ss_pred ceEeCcCCCCCCCCCCcHHH---HHHHHHHCCCCEEEECCCC
Confidence 68999999665333334544 4777888899876 3554
No 168
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=28.45 E-value=1e+02 Score=30.11 Aligned_cols=98 Identities=10% Similarity=0.047 Sum_probs=50.4
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEec--CchhhhHHHHHHHHHcCCCCCCC--ccCCCcHH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHA--ENGEIIDKNTQKLLAAGIKGPEG--HQLSRPEE 234 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHa--e~~~~i~~~~~~~~~~G~~~p~~--~~~s~p~~ 234 (592)
+.|+.++-+.-+-.-...++.+|-.++++.+.+. .+++.+++ .+.....+..+.+.+.|.++.-- ..+..|.+
T Consensus 36 ~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~ 115 (300)
T 3eb2_A 36 QAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEAYFPLKD 115 (300)
T ss_dssp HTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECCSSCCCH
T ss_pred HcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCH
Confidence 3566655332222223456777766666665542 24555554 23333334455556666554221 11223333
Q ss_pred HHHHHHHHHHHHhcccCCCEEEEeccc
Q psy6858 235 VEAEAVTRACTIANQVDCPLYVVHIMS 261 (592)
Q Consensus 235 ~e~eav~~~i~la~~~~~pl~i~hv~s 261 (592)
- +.+..--.+++..+.|+.+.++-.
T Consensus 116 ~--~l~~~f~~va~a~~lPiilYn~P~ 140 (300)
T 3eb2_A 116 A--QIESYFRAIADAVEIPVVIYTNPQ 140 (300)
T ss_dssp H--HHHHHHHHHHHHCSSCEEEEECTT
T ss_pred H--HHHHHHHHHHHHCCCCEEEEECcc
Confidence 2 333444567777899999999753
No 169
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=27.23 E-value=2.5e+02 Score=27.93 Aligned_cols=70 Identities=20% Similarity=0.158 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCC
Q psy6858 152 VQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGP 224 (592)
Q Consensus 152 ~~~~~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p 224 (592)
+.++++.+. +.|+..+.+..+.........+.+.++++.+++.+..+. ..++.+..+..+.+.+.|+...
T Consensus 104 i~~~~~~~~-~~g~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~g~~i~--~t~G~l~~e~l~~L~~aGvd~v 173 (369)
T 1r30_A 104 VLESARKAK-AAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEAC--MTLGTLSESQAQRLANAGLDYY 173 (369)
T ss_dssp HHHHHHHHH-HTTCSEEEEEECCSSCCTTTHHHHHHHHHHHHHTTSEEE--EECSSCCHHHHHHHHHHCCCEE
T ss_pred HHHHHHHHH-HcCCcEEEEEeCCCCCCcCCHHHHHHHHHHHHHcCCeEE--EecCCCCHHHHHHHHHCCCCEE
Confidence 333344333 458877654332211233567889999999999887765 4555556677888888887653
No 170
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=26.87 E-value=1.6e+02 Score=28.54 Aligned_cols=98 Identities=13% Similarity=0.042 Sum_probs=50.6
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecC--chhhhHHHHHHHHHcCCCCCC--CccCCC-cHHHH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAE--NGEIIDKNTQKLLAAGIKGPE--GHQLSR-PEEVE 236 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae--~~~~i~~~~~~~~~~G~~~p~--~~~~s~-p~~~e 236 (592)
+.|+.++-+.-+-.-...++.+|-.++++.+.+.-.-+.+++. +.....+..+.+.+.|.++.- -..+.. |.+-
T Consensus 31 ~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~gviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~- 109 (293)
T 1w3i_A 31 RKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNKIIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAPYYYPRMSEK- 109 (293)
T ss_dssp HTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSCEEEECCCSCHHHHHHHHHHGGGSCCSEEEEECCCSCSSCCHH-
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCHH-
Confidence 4577766544332233457777777777777654221445542 222223334444455554321 112223 3332
Q ss_pred HHHHHHHHHHhcccCCCEEEEeccc
Q psy6858 237 AEAVTRACTIANQVDCPLYVVHIMS 261 (592)
Q Consensus 237 ~eav~~~i~la~~~~~pl~i~hv~s 261 (592)
+.+..--.+++..+.|+.+.++-.
T Consensus 110 -~l~~~f~~va~a~~lPiilYn~P~ 133 (293)
T 1w3i_A 110 -HLVKYFKTLCEVSPHPVYLYNYPT 133 (293)
T ss_dssp -HHHHHHHHHHHHCSSCEEEEECHH
T ss_pred -HHHHHHHHHHhhCCCCEEEEECch
Confidence 333444456777899999988743
No 171
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=26.59 E-value=2.9e+02 Score=26.94 Aligned_cols=57 Identities=7% Similarity=0.008 Sum_probs=39.3
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc--CCeEEEecCchh
Q psy6858 148 WSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL--GAIAMVHAENGE 207 (592)
Q Consensus 148 ~~~~~~~~~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~--g~~~~vHae~~~ 207 (592)
.+.+...++.+.+.+.|+..+.+.- ....+++.+++++++..++. +.++.+|+.|..
T Consensus 154 ~~~~~~~~~~~~~~~~Ga~~i~l~D---T~G~~~P~~v~~lv~~l~~~~~~~~l~~H~Hnd~ 212 (307)
T 1ydo_A 154 VPIEQVIRLSEALFEFGISELSLGD---TIGAANPAQVETVLEALLARFPANQIALHFHDTR 212 (307)
T ss_dssp CCHHHHHHHHHHHHHHTCSCEEEEC---SSCCCCHHHHHHHHHHHHTTSCGGGEEEECBGGG
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEcC---CCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 4555555555555567988765431 23357899999999988864 478999998753
No 172
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=25.75 E-value=4.5e+02 Score=25.19 Aligned_cols=57 Identities=11% Similarity=-0.053 Sum_probs=39.3
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc-C-CeEEEecCch
Q psy6858 147 WWSDQVQQEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL-G-AIAMVHAENG 206 (592)
Q Consensus 147 ~~~~~~~~~~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~-g-~~~~vHae~~ 206 (592)
..+.+...++.+.+.+.|+..+.+.- ..| ..++.+.+++++..++. . .++.+|..|+
T Consensus 151 ~~~~~~~~~~~~~~~~~G~d~i~l~D-t~G--~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~ 209 (295)
T 1ydn_A 151 PVTPQAVASVTEQLFSLGCHEVSLGD-TIG--RGTPDTVAAMLDAVLAIAPAHSLAGHYHDT 209 (295)
T ss_dssp ECCHHHHHHHHHHHHHHTCSEEEEEE-TTS--CCCHHHHHHHHHHHHTTSCGGGEEEEEBCT
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEecC-CCC--CcCHHHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 34555555666655577998877652 233 36899999999888764 3 6788998764
No 173
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=25.00 E-value=4.6e+02 Score=25.09 Aligned_cols=100 Identities=11% Similarity=0.140 Sum_probs=52.6
Q ss_pred HHHHHHHHHHcCCcEEEEEEeeCCCcC-----CCHHHHHHHHHHHHHcCCeEE---EecCchhh----hHHHHHHHHHcC
Q psy6858 153 QQEMAELCEKHGVNSFKTFMAYKGLYM-----LSDGELYDAFSAIKNLGAIAM---VHAENGEI----IDKNTQKLLAAG 220 (592)
Q Consensus 153 ~~~~~~lv~~~Gv~~~k~~~~~~~~~~-----~~~~~l~~~~~~a~~~g~~~~---vHae~~~~----i~~~~~~~~~~G 220 (592)
.++.-+.+++.|...+.+.... .... .+++.+.++.+.+++.|+.+. +|..+... .......+
T Consensus 17 ~~~~l~~~~~~G~~~vEl~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~g~~~~~p~~~~~~~~~---- 91 (340)
T 2zds_A 17 LEEVCRLARDFGYDGLELACWG-DHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQAVCDAIIDERHEAI---- 91 (340)
T ss_dssp HHHHHHHHHHHTCSEEEEESST-TTCCHHHHHHCTTHHHHHHHHHHHTTCEEEEEEEHHHHHHHHCSCCSHHHHHH----
T ss_pred HHHHHHHHHHcCCCEEEecccc-ccCCccccccCHHHHHHHHHHHHHcCCeEEEeecccccccccccccccccccc----
Confidence 3444445556799988876431 1111 234567888889999999875 34300000 00000000
Q ss_pred CCCCCCccCC--CcH---HHHHHHHHHHHHHhcccCCCEEEEecc
Q psy6858 221 IKGPEGHQLS--RPE---EVEAEAVTRACTIANQVDCPLYVVHIM 260 (592)
Q Consensus 221 ~~~p~~~~~s--~p~---~~e~eav~~~i~la~~~~~pl~i~hv~ 260 (592)
. + ....+ .|+ +...+.+.+.+++|...|++..++|..
T Consensus 92 -~-~-~~l~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g 133 (340)
T 2zds_A 92 -L-P-ARIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTG 133 (340)
T ss_dssp -S-C-HHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred -c-c-ccccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 0 0 00000 111 112356778999999999998888864
No 174
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=24.32 E-value=2.6e+02 Score=27.45 Aligned_cols=95 Identities=13% Similarity=0.083 Sum_probs=50.4
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHc---CCeEEEecCc-hhhhHHHHHHHHHcCCCCCC--CccCCCcHHH
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNL---GAIAMVHAEN-GEIIDKNTQKLLAAGIKGPE--GHQLSRPEEV 235 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~~~vHae~-~~~i~~~~~~~~~~G~~~p~--~~~~s~p~~~ 235 (592)
+.|++++-+.-+-.-...++.+|-.++++.+.+. .+++.+++.. .....+..+.+.+.|.++.- -..+..|.+-
T Consensus 44 ~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~ 123 (314)
T 3d0c_A 44 QNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGKSAIDSGADCVMIHQPVHPYITDA 123 (314)
T ss_dssp HTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHTTCSEEEECCCCCSCCCHH
T ss_pred HcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHH
Confidence 4577765433222223457777777766665542 3566666443 22233345555666655421 1122334332
Q ss_pred HHHHHHHHHHHhcccCCCEEEEe
Q psy6858 236 EAEAVTRACTIANQVDCPLYVVH 258 (592)
Q Consensus 236 e~eav~~~i~la~~~~~pl~i~h 258 (592)
+.+..-..+++..+.|+.+.+
T Consensus 124 --~l~~~f~~va~a~~lPiilYn 144 (314)
T 3d0c_A 124 --GAVEYYRNIIEALDAPSIIYF 144 (314)
T ss_dssp --HHHHHHHHHHHHSSSCEEEEE
T ss_pred --HHHHHHHHHHHhCCCCEEEEe
Confidence 333444456777889999988
No 175
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=24.02 E-value=4.5e+02 Score=24.59 Aligned_cols=113 Identities=15% Similarity=0.076 Sum_probs=67.9
Q ss_pred CCCChhhHHHHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCceeeeeccccccCCChHHHHHHHHHHHHcCC
Q psy6858 86 GATSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCCDYALHVGITWWSDQVQQEMAELCEKHGV 165 (592)
Q Consensus 86 ~~~~~d~~~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~Gv 165 (592)
+..+.+++...+..+...|+-+|+ +.|. ...+.+.+......+.+.-.+|..+. ...+....+.++.++. |.
T Consensus 31 p~~t~~~i~~l~~~a~~~~~~aVc--v~p~----~v~a~~~l~~~~~v~v~tvigFP~G~-~~~~~k~~e~~~Av~~-GA 102 (234)
T 1n7k_A 31 PRATEEDVRNLVREASDYGFRCAV--LTPV----YTVKISGLAEKLGVKLCSVIGFPLGQ-APLEVKLVEAQTVLEA-GA 102 (234)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEE--ECHH----HHHHHHHHHHHHTCCEEEEESTTTCC-SCHHHHHHHHHHHHHH-TC
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEE--EchH----HheeehHhCCCCCceEEEEeCCCCCC-CcHHHHHHHHHHHHHc-CC
Confidence 456788899999999999999995 3332 22222223222123444444443332 2334455678887764 99
Q ss_pred cEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCch
Q psy6858 166 NSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENG 206 (592)
Q Consensus 166 ~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~ 206 (592)
.-+.+.+.+......-.+++.++.+.|.+.|.++-+=.|..
T Consensus 103 dEID~vinig~~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~ 143 (234)
T 1n7k_A 103 TELDVVPHLSLGPEAVYREVSGIVKLAKSYGAVVKVILEAP 143 (234)
T ss_dssp CEEEECCCGGGCHHHHHHHHHHHHHHHHHTTCEEEEECCGG
T ss_pred CEEEEeccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEecc
Confidence 98887776544333223457777778888777765555553
No 176
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=23.63 E-value=4.5e+02 Score=24.44 Aligned_cols=87 Identities=15% Similarity=0.155 Sum_probs=53.5
Q ss_pred HHHHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCCCCCCCccCCCcH
Q psy6858 154 QEMAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGIKGPEGHQLSRPE 233 (592)
Q Consensus 154 ~~~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~~~p~~~~~s~p~ 233 (592)
++.-+.+++.|...+.+... ......+..+.++.+.++++|+.+..|...... ..+.++ .++
T Consensus 20 ~~~l~~~~~~G~~~vEl~~~--~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~----------~~l~~~------d~~ 81 (290)
T 2qul_A 20 PATAKRIAGLGFDLMEISLG--EFHNLSDAKKRELKAVADDLGLTVMCCIGLKSE----------YDFASP------DKS 81 (290)
T ss_dssp HHHHHHHHHTTCSEEEEEST--TGGGSCHHHHHHHHHHHHHHTCEEEEEEEECGG----------GCTTCS------CHH
T ss_pred HHHHHHHHHhCCCEEEEecC--CccccchhhHHHHHHHHHHcCCceEEecCCCCC----------CCCCCC------CHH
Confidence 44444556679998887643 222234577888999999999998887521100 001110 111
Q ss_pred --HHHHHHHHHHHHHhcccCCCEEEEe
Q psy6858 234 --EVEAEAVTRACTIANQVDCPLYVVH 258 (592)
Q Consensus 234 --~~e~eav~~~i~la~~~~~pl~i~h 258 (592)
+...+.+.+++.+|...|++..+.+
T Consensus 82 ~r~~~~~~~~~~i~~a~~lG~~~v~~~ 108 (290)
T 2qul_A 82 VRDAGTEYVKRLLDDCHLLGAPVFAGL 108 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEee
Confidence 1123677889999999999977653
No 177
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=23.27 E-value=6.9e+02 Score=26.52 Aligned_cols=178 Identities=15% Similarity=0.174 Sum_probs=96.7
Q ss_pred CChhhHHHHHHHHHcCCeeEEeccccCCC--------CccHHHHHHHHHHHhccCceeeeecc----ccccCCChHHHHH
Q psy6858 88 TSVDDFYHGTKAAVAGGTTTIIDFALPRK--------GESLIKTYESWRQKADEKVCCDYALH----VGITWWSDQVQQE 155 (592)
Q Consensus 88 ~~~d~~~~~~~~ala~GtTti~d~~~~~~--------~~~~~~a~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 155 (592)
++.++...-++.+.+.|+..|- ...+.. .++..+.++.++.... ......-.. .+.....+.+.+.
T Consensus 44 ~~tedKl~Ia~~L~~~Gv~~IE-~G~patF~~~~rfl~~d~~e~lr~l~~~~~-~~~l~~L~R~~N~~G~~~ypddv~~~ 121 (539)
T 1rqb_A 44 MAMEDMVGACADIDAAGYWSVE-CWGGATYDSCIRFLNEDPWERLRTFRKLMP-NSRLQMLLRGQNLLGYRHYNDEVVDR 121 (539)
T ss_dssp CCGGGTGGGHHHHHHTTCSEEE-EEETTHHHHHHHTSCCCHHHHHHHHHHHCT-TSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEE-eCcccccccchhccCCCHHHHHHHHHHhCC-CCEEEEEeccccccCcccCcccccHH
Confidence 4556655556677778998884 322221 3455566666665422 222111111 1223334444444
Q ss_pred HHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEe--cC-----chhhhHHHHHHHHHcCCCCCC---
Q psy6858 156 MAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVH--AE-----NGEIIDKNTQKLLAAGIKGPE--- 225 (592)
Q Consensus 156 ~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vH--ae-----~~~~i~~~~~~~~~~G~~~p~--- 225 (592)
.-+.+.+.|+..+.+|.+... .+.+.+.++.+++.|..+.+. ++ +.+...+..+.+.+.|.....
T Consensus 122 ~ve~a~~aGvd~vrIf~s~sd-----~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~L~D 196 (539)
T 1rqb_A 122 FVDKSAENGMDVFRVFDAMND-----PRNMAHAMAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLLDMGADSIALKD 196 (539)
T ss_dssp HHHHHHHTTCCEEEECCTTCC-----THHHHHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHhCCCCEEEEEEehhH-----HHHHHHHHHHHHHCCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCEEEeCC
Confidence 334444579999998865332 267899999999999987544 33 335556667888888865321
Q ss_pred CccCCCcHHHHHHHHHHHHHHhccc--CCCEEEE-ecccHHHHHHHHHHHHHHHhcCC
Q psy6858 226 GHQLSRPEEVEAEAVTRACTIANQV--DCPLYVV-HIMSKAAGDAMAYKRKELMKKGK 280 (592)
Q Consensus 226 ~~~~s~p~~~e~eav~~~i~la~~~--~~pl~i~-hv~s~~a~~~i~~ar~~~~~~G~ 280 (592)
.--...|.++. +.+..... .. +++++++ |-...-+..-...|-+. |+
T Consensus 197 T~G~~~P~~v~-~lv~~l~~---~~p~~i~I~~H~Hnd~GlAvAN~laAveA----Ga 246 (539)
T 1rqb_A 197 MAALLKPQPAY-DIIKAIKD---TYGQKTQINLHCHSTTGVTEVSLMKAIEA----GV 246 (539)
T ss_dssp TTCCCCHHHHH-HHHHHHHH---HHCTTCCEEEEEBCTTSCHHHHHHHHHHT----TC
T ss_pred CCCCcCHHHHH-HHHHHHHH---hcCCCceEEEEeCCCCChHHHHHHHHHHh----CC
Confidence 12345677664 33333322 33 5777652 33333333333333344 87
No 178
>3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141, structural genomics, PSI-2, protein structure initiative; 2.10A {Listeria monocytogenes str}
Probab=22.96 E-value=1.6e+02 Score=28.44 Aligned_cols=37 Identities=24% Similarity=0.193 Sum_probs=23.5
Q ss_pred ccccCcCcccccCCCCChhhHHHHHHHHHcCCeeEE--ecc
Q psy6858 73 GIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTI--IDF 111 (592)
Q Consensus 73 ~ID~HtH~~~~~~~~~~~d~~~~~~~~ala~GtTti--~d~ 111 (592)
.+|.|+|......+. ...+....++|.+.|++.+ .||
T Consensus 2 ~~D~H~Ht~~s~~~~--~~~~~e~~~~A~~~G~~~i~~TdH 40 (283)
T 3dcp_A 2 KRDGHTHTEFCPHGT--HDDVEEMVLKAIELDFDEYSIVEH 40 (283)
T ss_dssp CEEEEECCTTCTTSC--CCCHHHHHHHHHHTTCCEEEEEEE
T ss_pred CeEEeeCCCCCCCCC--CCCHHHHHHHHHHCCCCEEEEecC
Confidence 589999985543221 1233445888888998865 455
No 179
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=22.20 E-value=4.5e+02 Score=24.13 Aligned_cols=21 Identities=5% Similarity=-0.001 Sum_probs=10.7
Q ss_pred HHHHHHHHHhcccCCCEEEEe
Q psy6858 238 EAVTRACTIANQVDCPLYVVH 258 (592)
Q Consensus 238 eav~~~i~la~~~~~pl~i~h 258 (592)
+.+.+.+++|...|++..++|
T Consensus 84 ~~~~~~i~~a~~lG~~~v~~~ 104 (278)
T 1i60_A 84 TEFKGMMETCKTLGVKYVVAV 104 (278)
T ss_dssp HHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEe
Confidence 334455555555555554444
No 180
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=21.97 E-value=50 Score=32.21 Aligned_cols=32 Identities=25% Similarity=0.275 Sum_probs=25.0
Q ss_pred ccccCcCcccccCCCCChhhHHHHHHHHHcCCeeEE
Q psy6858 73 GIDPHTHFELELMGATSVDDFYHGTKAAVAGGTTTI 108 (592)
Q Consensus 73 ~ID~HtH~~~~~~~~~~~d~~~~~~~~ala~GtTti 108 (592)
++|.|+|...+ .+..+++++ .+.|.+.|++.+
T Consensus 3 ~~DLH~Ht~~S-Dg~~~~~el---v~~A~~~Gl~~i 34 (292)
T 2yb1_A 3 NIDLHFHSRTS-DGALTPTEV---IDRAAARAPALL 34 (292)
T ss_dssp CEECCBCCTTT-TCSSCHHHH---HHHHHTTCCSEE
T ss_pred ccccccCCCcc-CCCCCHHHH---HHHHHHCCCCEE
Confidence 68999999766 566666665 777888999876
No 181
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0
Probab=21.87 E-value=5.7e+02 Score=25.07 Aligned_cols=117 Identities=14% Similarity=0.009 Sum_probs=62.8
Q ss_pred CChhhHHHHHHHHHcCCeeEEeccccCCCCccHHHHHHHHHHHhccCcee--eeeccc---c------ccCC-ChHHHHH
Q psy6858 88 TSVDDFYHGTKAAVAGGTTTIIDFALPRKGESLIKTYESWRQKADEKVCC--DYALHV---G------ITWW-SDQVQQE 155 (592)
Q Consensus 88 ~~~d~~~~~~~~ala~GtTti~d~~~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~---~------~~~~-~~~~~~~ 155 (592)
...++.....+.|+..|++.| |....-......+.+-++.........+ -++... . .... .+.+.+.
T Consensus 49 ~~~~~~~~~l~~Al~~Gi~~~-DTA~~Yg~G~sE~~lG~al~~~R~~v~I~TK~g~~~~~~~~~~~~~~~~~~~~~i~~~ 127 (348)
T 3n2t_A 49 PDDDNGVRTIHAALDEGINLI-DTAPVYGFGHSEEIVGRALAEKPNKAHVATKLGLHWVGEDEKNMKVFRDSRPARIRKE 127 (348)
T ss_dssp TTHHHHHHHHHHHHHTTCCEE-ECCTTGGGGHHHHHHHHHHHHSCCCCEEEEEECEEEESSSTTTCEEEECCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEE-EChhhcCCChHHHHHHHHHhhCCCeEEEEEeecCCCcCCCcccccccCCCCHHHHHHH
Confidence 455667778889999999987 5532111001122222222211111111 121110 0 0012 2346667
Q ss_pred HHHHHHHcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCc
Q psy6858 156 MAELCEKHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAEN 205 (592)
Q Consensus 156 ~~~lv~~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~ 205 (592)
+++-++.-|...+-+|+--.-......++..+.++.+++.|..-.+=..|
T Consensus 128 ~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn 177 (348)
T 3n2t_A 128 VEDSLRRLRVETIDLEQIHWPDDKTPIDESARELQKLHQDGKIRALGVSN 177 (348)
T ss_dssp HHHHHHHHTCSSEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred HHHHHHHhCCCcEEEEEecCCCCCCCHHHHHHHHHHHHHhCcceEEecCC
Confidence 77777777988888776422222345677888888888888776655554
No 182
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=21.52 E-value=3.5e+02 Score=25.80 Aligned_cols=51 Identities=14% Similarity=0.274 Sum_probs=36.7
Q ss_pred HcCCcEEEEEEeeCCCcCCCHHHHHHHHHHHHHcCCeEEEecCchhhhHHHHHHHHHcCC
Q psy6858 162 KHGVNSFKTFMAYKGLYMLSDGELYDAFSAIKNLGAIAMVHAENGEIIDKNTQKLLAAGI 221 (592)
Q Consensus 162 ~~Gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~~~vHae~~~~i~~~~~~~~~~G~ 221 (592)
..|...+....+ .++++++.++.+.|+++|+-+.+...+. +...+.++.|.
T Consensus 124 ~~GADaILLI~a-----~L~~~~l~~l~~~A~~lGl~~LvEVh~~----~El~rAl~~~a 174 (258)
T 4a29_A 124 NLGADTVLLIVK-----ILTERELESLLEYARSYGMEPLILINDE----NDLDIALRIGA 174 (258)
T ss_dssp HHTCSEEEEEGG-----GSCHHHHHHHHHHHHHTTCCCEEEESSH----HHHHHHHHTTC
T ss_pred HcCCCeeehHHh-----hcCHHHHHHHHHHHHHHhHHHHHhcchH----HHHHHHhcCCC
Confidence 359988876544 4789999999999999997766665553 24555666653
No 183
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=20.41 E-value=2.9e+02 Score=27.44 Aligned_cols=50 Identities=18% Similarity=0.175 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHcCCcEEEEEEe--eCCC----------cCCCHHHHHHHHHHHHHcCCeEEE
Q psy6858 151 QVQQEMAELCEKHGVNSFKTFMA--YKGL----------YMLSDGELYDAFSAIKNLGAIAMV 201 (592)
Q Consensus 151 ~~~~~~~~lv~~~Gv~~~k~~~~--~~~~----------~~~~~~~l~~~~~~a~~~g~~~~v 201 (592)
...+.+..+ ++.|+|.+.+... ..+. ...+++.+.++.+.|+++|+.+++
T Consensus 54 ~~~~~l~~l-k~~g~N~VrL~v~~~~~~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~GL~V~l 115 (343)
T 3civ_A 54 EARASMRAL-AEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCL 115 (343)
T ss_dssp HHHHHHHHH-HHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEE
T ss_pred hHHHHHHHH-HHcCCCEEEEEeeecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 344444444 4589999876432 1111 123789999999999999999877
No 184
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=20.32 E-value=5e+02 Score=23.77 Aligned_cols=16 Identities=6% Similarity=-0.157 Sum_probs=9.3
Q ss_pred HHHHHHHHHcCCeeEE
Q psy6858 93 FYHGTKAAVAGGTTTI 108 (592)
Q Consensus 93 ~~~~~~~ala~GtTti 108 (592)
+....+.+.+.|...|
T Consensus 32 ~~~~l~~~~~~G~~~v 47 (257)
T 3lmz_A 32 LDTTLKTLERLDIHYL 47 (257)
T ss_dssp HHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHhCCCEE
Confidence 4444555566666666
No 185
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=20.04 E-value=4.3e+02 Score=25.29 Aligned_cols=50 Identities=16% Similarity=0.171 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHcCCcEEEEEEeeCCCc-------CCCHHHHHHHHHHHHHcCCeEEEe
Q psy6858 152 VQQEMAELCEKHGVNSFKTFMAYKGLY-------MLSDGELYDAFSAIKNLGAIAMVH 202 (592)
Q Consensus 152 ~~~~~~~lv~~~Gv~~~k~~~~~~~~~-------~~~~~~l~~~~~~a~~~g~~~~vH 202 (592)
..+++.+++++.|+....+...+. .. .-..+.+.+.++.|+.+|+...+-
T Consensus 77 ~~~~l~~~l~~~GL~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~ 133 (305)
T 3obe_A 77 ASKDYKKMVDDAGLRISSSHLTPS-LREYTKENMPKFDEFWKKATDIHAELGVSCMVQ 133 (305)
T ss_dssp CHHHHHHHHHHTTCEEEEEBCCCS-CCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHHCCCeEEEeecccc-ccccchhhHHHHHHHHHHHHHHHHHcCCCEEEe
Confidence 466777777777775433221110 00 011345888889999999876654
Done!