Query psy6866
Match_columns 961
No_of_seqs 474 out of 3282
Neff 8.4
Searched_HMMs 46136
Date Fri Aug 16 20:23:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6866.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6866hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0203|consensus 100.0 5E-153 1E-157 1286.8 46.3 859 100-959 24-909 (1019)
2 KOG0204|consensus 100.0 3E-145 6E-150 1224.9 63.9 852 24-915 19-894 (1034)
3 KOG0202|consensus 100.0 6E-145 1E-149 1225.1 60.1 788 115-924 4-842 (972)
4 TIGR01106 ATPase-IIC_X-K sodiu 100.0 2E-136 5E-141 1280.9 93.7 848 107-955 9-883 (997)
5 TIGR01523 ATPase-IID_K-Na pota 100.0 7E-131 2E-135 1226.6 86.6 788 113-922 5-913 (1053)
6 COG0474 MgtA Cation transport 100.0 8E-130 2E-134 1206.7 76.8 774 113-923 21-804 (917)
7 PRK10517 magnesium-transportin 100.0 2E-124 3E-129 1156.0 84.1 735 117-923 51-794 (902)
8 TIGR01517 ATPase-IIB_Ca plasma 100.0 5E-124 1E-128 1167.6 88.8 770 117-920 41-829 (941)
9 TIGR01522 ATPase-IIA2_Ca golgi 100.0 5E-123 1E-127 1151.9 88.0 760 114-921 3-779 (884)
10 PRK15122 magnesium-transportin 100.0 8E-123 2E-127 1142.8 84.2 743 116-918 28-789 (903)
11 TIGR01524 ATPase-IIIB_Mg magne 100.0 2E-122 5E-127 1138.4 85.2 732 116-920 16-756 (867)
12 TIGR01116 ATPase-IIA1_Ca sarco 100.0 2E-116 5E-121 1094.5 80.3 749 165-926 2-796 (917)
13 TIGR01647 ATPase-IIIA_H plasma 100.0 3E-114 7E-119 1053.6 79.9 685 134-922 1-687 (755)
14 TIGR01657 P-ATPase-V P-type AT 100.0 2E-114 5E-119 1090.0 75.5 780 83-928 96-962 (1054)
15 TIGR01652 ATPase-Plipid phosph 100.0 2E-101 4E-106 976.2 57.3 746 147-922 1-939 (1057)
16 KOG0208|consensus 100.0 1E-98 2E-103 859.5 53.8 745 132-928 158-1013(1140)
17 PLN03190 aminophospholipid tra 100.0 1.6E-94 3.5E-99 901.5 69.8 748 146-922 86-1042(1178)
18 PRK14010 potassium-transportin 100.0 5E-90 1.1E-94 812.3 62.4 555 167-844 29-589 (673)
19 KOG0205|consensus 100.0 1.4E-90 3.1E-95 758.2 43.5 745 116-957 19-786 (942)
20 PRK01122 potassium-transportin 100.0 8.2E-88 1.8E-92 794.2 66.0 547 167-830 30-579 (679)
21 TIGR01497 kdpB K+-transporting 100.0 2.5E-83 5.3E-88 754.2 61.3 556 167-839 29-589 (675)
22 COG2217 ZntA Cation transport 100.0 6.5E-79 1.4E-83 717.7 57.3 505 201-838 173-679 (713)
23 KOG0206|consensus 100.0 3.1E-80 6.6E-85 745.1 28.6 748 143-922 28-965 (1151)
24 KOG0210|consensus 100.0 4.2E-78 9.2E-83 663.0 35.7 669 213-915 143-944 (1051)
25 PRK11033 zntA zinc/cadmium/mer 100.0 1.3E-74 2.8E-79 703.1 59.5 499 203-838 207-708 (741)
26 KOG0209|consensus 100.0 2.8E-76 6.1E-81 660.1 35.9 743 85-904 127-1016(1160)
27 TIGR01494 ATPase_P-type ATPase 100.0 3.7E-74 7.9E-79 678.0 54.5 488 211-869 5-498 (499)
28 TIGR01525 ATPase-IB_hvy heavy 100.0 4.5E-73 9.7E-78 674.7 52.7 508 202-838 18-527 (556)
29 TIGR01512 ATPase-IB2_Cd heavy 100.0 3.7E-72 8E-77 662.4 54.8 487 202-837 18-505 (536)
30 KOG0207|consensus 100.0 3.7E-73 7.9E-78 651.4 42.3 552 200-876 339-906 (951)
31 PRK10671 copA copper exporting 100.0 2.7E-70 6E-75 678.9 62.2 501 205-837 289-791 (834)
32 TIGR01511 ATPase-IB1_Cu copper 100.0 2.1E-70 4.6E-75 649.4 57.0 492 201-837 53-545 (562)
33 COG2216 KdpB High-affinity K+ 100.0 6.4E-60 1.4E-64 507.6 35.5 495 208-817 72-568 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 2.4E-35 5.2E-40 313.6 22.1 226 208-438 2-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 4.9E-22 1.1E-26 208.9 10.6 97 651-777 115-215 (215)
36 KOG4383|consensus 99.8 8.5E-17 1.8E-21 178.4 34.3 303 577-881 698-1148(1354)
37 COG4087 Soluble P-type ATPase 99.5 1.2E-13 2.6E-18 124.6 11.0 118 652-800 19-138 (152)
38 PF13246 Hydrolase_like2: Puta 99.4 2.9E-13 6.3E-18 120.6 8.0 88 497-588 1-90 (91)
39 PF00690 Cation_ATPase_N: Cati 99.3 3.9E-12 8.4E-17 107.4 7.5 69 115-183 1-69 (69)
40 PF00689 Cation_ATPase_C: Cati 99.1 6.1E-11 1.3E-15 121.2 7.4 80 847-928 1-80 (182)
41 smart00831 Cation_ATPase_N Cat 99.0 9.7E-10 2.1E-14 91.4 7.3 61 126-186 2-62 (64)
42 PRK10513 sugar phosphate phosp 99.0 1.9E-09 4.1E-14 117.6 11.3 67 744-811 195-265 (270)
43 COG0561 Cof Predicted hydrolas 99.0 5.3E-09 1.2E-13 113.7 13.6 148 664-812 21-259 (264)
44 PRK01158 phosphoglycolate phos 99.0 4.7E-09 1E-13 111.6 12.8 148 663-811 20-226 (230)
45 TIGR02137 HSK-PSP phosphoserin 98.9 3.2E-09 7E-14 109.8 10.6 131 663-813 68-198 (203)
46 PRK15126 thiamin pyrimidine py 98.9 6.5E-09 1.4E-13 113.5 11.8 66 745-811 188-259 (272)
47 TIGR01487 SPP-like sucrose-pho 98.9 5.3E-09 1.2E-13 110.0 10.6 146 663-809 18-214 (215)
48 TIGR01482 SPP-subfamily Sucros 98.9 1.2E-08 2.5E-13 108.1 12.5 148 663-811 15-222 (225)
49 PRK11133 serB phosphoserine ph 98.9 5.9E-09 1.3E-13 115.2 10.4 130 663-810 181-315 (322)
50 PRK10976 putative hydrolase; P 98.9 1.3E-08 2.7E-13 110.9 11.7 66 745-811 190-261 (266)
51 PLN02887 hydrolase family prot 98.8 3.5E-08 7.7E-13 116.5 12.8 66 745-811 507-576 (580)
52 TIGR02726 phenyl_P_delta pheny 98.8 2.6E-08 5.6E-13 99.5 9.9 104 670-806 41-146 (169)
53 PRK10530 pyridoxal phosphate ( 98.8 4.1E-08 8.8E-13 107.2 12.2 66 745-811 199-268 (272)
54 PF08282 Hydrolase_3: haloacid 98.8 3.7E-08 7.9E-13 105.8 11.2 147 663-810 15-254 (254)
55 TIGR00338 serB phosphoserine p 98.7 4.4E-08 9.4E-13 103.3 10.2 128 663-808 85-217 (219)
56 TIGR01486 HAD-SF-IIB-MPGP mann 98.7 1.6E-07 3.4E-12 101.7 14.0 147 664-811 17-253 (256)
57 TIGR01670 YrbI-phosphatas 3-de 98.7 1E-07 2.3E-12 94.3 10.4 117 653-810 24-145 (154)
58 COG0560 SerB Phosphoserine pho 98.7 9.4E-08 2E-12 99.4 10.3 117 662-799 76-200 (212)
59 PRK03669 mannosyl-3-phosphogly 98.6 3E-07 6.5E-12 100.3 13.3 67 744-811 186-265 (271)
60 TIGR00099 Cof-subfamily Cof su 98.6 1.8E-07 3.9E-12 101.2 11.2 65 744-809 187-255 (256)
61 PRK00192 mannosyl-3-phosphogly 98.5 1.3E-06 2.7E-11 95.5 14.2 66 745-811 190-267 (273)
62 PRK09484 3-deoxy-D-manno-octul 98.5 4E-07 8.7E-12 92.9 8.2 98 670-802 55-156 (183)
63 PRK13582 thrH phosphoserine ph 98.3 2.3E-06 5E-11 89.1 10.7 125 663-809 68-194 (205)
64 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.3 1.9E-06 4E-11 89.4 9.6 117 663-795 80-200 (201)
65 COG1778 Low specificity phosph 98.3 1.4E-06 3E-11 82.5 7.6 116 671-821 43-166 (170)
66 KOG1615|consensus 98.3 1.5E-06 3.2E-11 85.0 6.4 110 663-783 88-199 (227)
67 TIGR02471 sucr_syn_bact_C sucr 98.2 6.2E-06 1.3E-10 88.0 9.5 68 744-812 158-233 (236)
68 TIGR03333 salvage_mtnX 2-hydro 98.2 8E-06 1.7E-10 85.8 9.9 111 663-783 70-182 (214)
69 TIGR01485 SPP_plant-cyano sucr 98.1 1.5E-05 3.3E-10 85.7 9.8 149 662-811 20-244 (249)
70 PRK08238 hypothetical protein; 98.1 0.00027 5.8E-09 82.5 20.6 99 663-789 72-170 (479)
71 PLN02954 phosphoserine phospha 98.0 4.3E-05 9.2E-10 80.8 11.6 126 663-808 84-221 (224)
72 TIGR01488 HAD-SF-IB Haloacid D 97.9 2.2E-05 4.9E-10 79.5 7.0 93 663-776 73-177 (177)
73 PF12710 HAD: haloacid dehalog 97.9 2.1E-05 4.6E-10 80.8 6.8 92 666-774 92-192 (192)
74 TIGR02461 osmo_MPG_phos mannos 97.9 5.3E-05 1.2E-09 80.0 9.7 43 661-703 13-55 (225)
75 TIGR01489 DKMTPPase-SF 2,3-dik 97.9 3.9E-05 8.4E-10 78.5 8.4 113 663-781 72-186 (188)
76 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.8 5E-05 1.1E-09 78.9 8.2 102 662-783 86-197 (202)
77 PRK09552 mtnX 2-hydroxy-3-keto 97.8 6.9E-05 1.5E-09 79.0 9.2 108 663-781 74-184 (219)
78 PLN02382 probable sucrose-phos 97.8 0.00012 2.6E-09 84.2 11.1 143 668-811 33-257 (413)
79 COG0546 Gph Predicted phosphat 97.7 0.00023 4.9E-09 75.1 11.5 126 661-809 87-216 (220)
80 PRK13222 phosphoglycolate phos 97.7 0.00025 5.5E-09 74.9 11.9 127 663-812 93-223 (226)
81 cd01427 HAD_like Haloacid deha 97.7 0.00019 4.1E-09 68.6 8.8 117 659-780 20-137 (139)
82 TIGR02463 MPGP_rel mannosyl-3- 97.6 0.00036 7.8E-09 73.6 11.1 38 666-703 19-56 (221)
83 PRK10187 trehalose-6-phosphate 97.5 0.00026 5.6E-09 76.8 7.4 131 663-800 36-232 (266)
84 TIGR01454 AHBA_synth_RP 3-amin 97.4 0.00082 1.8E-08 70.0 10.8 124 663-809 75-202 (205)
85 PRK14502 bifunctional mannosyl 97.3 0.00089 1.9E-08 79.5 10.4 40 664-703 434-473 (694)
86 PRK13223 phosphoglycolate phos 97.2 0.0018 4E-08 70.5 11.1 123 663-808 101-227 (272)
87 PRK12702 mannosyl-3-phosphogly 97.2 0.0019 4.1E-08 69.3 10.5 42 663-704 18-59 (302)
88 PRK13288 pyrophosphatase PpaX; 97.2 0.0022 4.7E-08 67.3 10.3 125 663-810 82-210 (214)
89 TIGR01449 PGP_bact 2-phosphogl 97.0 0.003 6.5E-08 66.0 10.0 121 663-806 85-209 (213)
90 PRK10826 2-deoxyglucose-6-phos 96.9 0.0043 9.2E-08 65.5 9.7 99 663-782 92-190 (222)
91 TIGR01544 HAD-SF-IE haloacid d 96.9 0.0071 1.5E-07 65.0 11.3 128 663-810 121-273 (277)
92 TIGR01545 YfhB_g-proteo haloac 96.8 0.0056 1.2E-07 63.9 9.6 106 663-783 94-201 (210)
93 TIGR01484 HAD-SF-IIB HAD-super 96.8 0.0041 9E-08 64.6 8.4 39 663-701 17-55 (204)
94 PRK11590 hypothetical protein; 96.7 0.011 2.3E-07 61.9 11.1 106 663-783 95-202 (211)
95 PRK13226 phosphoglycolate phos 96.7 0.012 2.5E-07 62.5 10.9 124 663-809 95-223 (229)
96 PF05116 S6PP: Sucrose-6F-phos 96.7 0.01 2.2E-07 63.7 10.4 68 744-812 164-244 (247)
97 PLN02770 haloacid dehalogenase 96.6 0.015 3.2E-07 62.6 11.6 118 663-801 108-228 (248)
98 PRK14501 putative bifunctional 96.6 0.019 4.1E-07 71.6 13.8 60 744-810 656-720 (726)
99 PRK13225 phosphoglycolate phos 96.5 0.019 4.1E-07 62.5 11.4 122 663-810 142-267 (273)
100 TIGR03351 PhnX-like phosphonat 96.5 0.019 4.1E-07 60.4 10.8 97 663-780 87-186 (220)
101 COG4030 Uncharacterized protei 96.4 0.025 5.4E-07 57.1 10.6 142 663-811 83-262 (315)
102 PLN03243 haloacid dehalogenase 96.4 0.016 3.4E-07 62.6 10.2 116 663-799 109-225 (260)
103 TIGR01548 HAD-SF-IA-hyp1 haloa 96.4 0.012 2.6E-07 60.8 8.4 93 662-776 105-197 (197)
104 PRK13478 phosphonoacetaldehyde 96.3 0.034 7.4E-07 60.4 12.0 101 663-783 101-205 (267)
105 PRK11587 putative phosphatase; 96.3 0.032 6.9E-07 58.6 11.3 114 663-799 83-198 (218)
106 TIGR01422 phosphonatase phosph 96.2 0.036 7.8E-07 59.7 11.6 97 663-779 99-196 (253)
107 TIGR01672 AphA HAD superfamily 96.2 0.0084 1.8E-07 63.4 6.1 88 664-779 115-206 (237)
108 PRK11009 aphA acid phosphatase 96.1 0.01 2.2E-07 62.8 6.3 88 663-780 114-207 (237)
109 COG4359 Uncharacterized conser 96.1 0.01 2.2E-07 58.2 5.5 109 663-781 73-183 (220)
110 smart00775 LNS2 LNS2 domain. T 95.9 0.034 7.3E-07 55.1 8.6 103 661-779 25-141 (157)
111 PRK06769 hypothetical protein; 95.9 0.045 9.8E-07 55.3 9.6 99 663-781 28-134 (173)
112 PRK08942 D,D-heptose 1,7-bisph 95.9 0.063 1.4E-06 54.6 10.7 99 663-779 29-142 (181)
113 PRK06698 bifunctional 5'-methy 95.8 0.057 1.2E-06 63.6 11.4 122 663-810 330-453 (459)
114 TIGR01662 HAD-SF-IIIA HAD-supe 95.7 0.06 1.3E-06 51.5 9.5 92 663-779 25-126 (132)
115 TIGR01428 HAD_type_II 2-haloal 95.7 0.044 9.6E-07 56.5 9.0 97 663-780 92-188 (198)
116 PLN02779 haloacid dehalogenase 95.6 0.059 1.3E-06 59.2 10.0 118 663-799 144-263 (286)
117 PRK14988 GMP/IMP nucleotidase; 95.4 0.059 1.3E-06 56.9 8.9 97 663-780 93-189 (224)
118 PF06888 Put_Phosphatase: Puta 95.4 0.037 8.1E-07 58.2 6.9 112 663-780 71-195 (234)
119 PHA02530 pseT polynucleotide k 95.3 0.053 1.1E-06 60.0 8.4 109 659-780 183-292 (300)
120 TIGR02253 CTE7 HAD superfamily 95.3 0.069 1.5E-06 56.1 8.8 97 663-780 94-191 (221)
121 TIGR01990 bPGM beta-phosphoglu 95.1 0.052 1.1E-06 55.2 7.1 95 663-780 87-181 (185)
122 TIGR01685 MDP-1 magnesium-depe 95.1 0.11 2.4E-06 52.3 9.1 111 654-782 36-155 (174)
123 TIGR01509 HAD-SF-IA-v3 haloaci 95.0 0.099 2.1E-06 52.9 8.8 94 663-778 85-178 (183)
124 PLN02575 haloacid dehalogenase 95.0 0.15 3.4E-06 57.5 10.9 115 663-799 216-332 (381)
125 PTZ00174 phosphomannomutase; P 95.0 0.018 3.8E-07 61.9 3.2 54 744-798 187-245 (247)
126 COG3769 Predicted hydrolase (H 94.8 0.26 5.6E-06 50.1 10.5 37 667-703 27-63 (274)
127 PF13419 HAD_2: Haloacid dehal 94.7 0.064 1.4E-06 53.4 6.4 97 663-780 77-173 (176)
128 TIGR02254 YjjG/YfnB HAD superf 94.7 0.15 3.3E-06 53.5 9.5 94 663-778 97-192 (224)
129 PRK09449 dUMP phosphatase; Pro 94.6 0.34 7.4E-06 50.9 11.9 123 663-809 95-221 (224)
130 TIGR01668 YqeG_hyp_ppase HAD s 94.5 0.11 2.3E-06 52.4 7.4 86 663-780 43-132 (170)
131 TIGR02009 PGMB-YQAB-SF beta-ph 94.4 0.089 1.9E-06 53.4 6.7 95 663-780 88-182 (185)
132 TIGR00213 GmhB_yaeD D,D-heptos 94.3 0.23 5.1E-06 50.2 9.5 27 663-689 26-52 (176)
133 PLN02940 riboflavin kinase 94.2 0.19 4.1E-06 57.6 9.4 97 663-780 93-190 (382)
134 TIGR01533 lipo_e_P4 5'-nucleot 93.7 0.3 6.4E-06 52.7 9.2 85 662-773 117-204 (266)
135 TIGR01656 Histidinol-ppas hist 93.6 0.21 4.5E-06 48.9 7.2 100 663-780 27-141 (147)
136 TIGR02252 DREG-2 REG-2-like, H 93.4 0.27 5.8E-06 50.9 8.1 95 663-779 105-200 (203)
137 TIGR01549 HAD-SF-IA-v1 haloaci 93.2 0.26 5.7E-06 48.4 7.3 90 664-777 65-154 (154)
138 TIGR01459 HAD-SF-IIA-hyp4 HAD- 93.2 0.88 1.9E-05 48.6 11.8 49 656-704 17-67 (242)
139 TIGR01261 hisB_Nterm histidino 93.1 0.22 4.7E-06 49.6 6.6 97 663-781 29-144 (161)
140 COG2179 Predicted hydrolase of 92.8 0.31 6.7E-06 47.6 6.7 83 663-778 46-132 (175)
141 smart00577 CPDc catalytic doma 92.6 0.17 3.8E-06 49.5 5.0 96 662-781 44-139 (148)
142 TIGR01691 enolase-ppase 2,3-di 92.4 0.63 1.4E-05 48.9 9.1 98 662-782 94-194 (220)
143 TIGR00685 T6PP trehalose-phosp 92.3 0.21 4.5E-06 53.5 5.6 69 737-810 159-239 (244)
144 TIGR01675 plant-AP plant acid 92.3 0.5 1.1E-05 49.5 8.1 86 663-771 120-210 (229)
145 PLN02205 alpha,alpha-trehalose 92.2 0.62 1.3E-05 58.7 10.4 37 663-699 616-653 (854)
146 PLN02811 hydrolase 92.2 0.39 8.6E-06 50.4 7.5 98 663-781 78-181 (220)
147 PRK05446 imidazole glycerol-ph 91.6 0.56 1.2E-05 52.7 8.1 100 663-781 30-145 (354)
148 KOG3120|consensus 91.0 1.4 3.1E-05 45.0 9.3 119 663-786 84-212 (256)
149 TIGR01664 DNA-3'-Pase DNA 3'-p 90.3 0.97 2.1E-05 45.2 7.6 94 664-780 43-158 (166)
150 PLN02919 haloacid dehalogenase 90.2 0.68 1.5E-05 60.1 8.1 132 663-814 161-295 (1057)
151 TIGR02247 HAD-1A3-hyp Epoxide 90.1 0.6 1.3E-05 48.6 6.3 97 663-780 94-192 (211)
152 TIGR01681 HAD-SF-IIIC HAD-supe 90.0 0.62 1.3E-05 44.4 5.7 39 663-701 29-68 (128)
153 PF09419 PGP_phosphatase: Mito 89.7 0.99 2.2E-05 45.0 7.0 86 661-777 57-157 (168)
154 TIGR01458 HAD-SF-IIA-hyp3 HAD- 89.4 4.9 0.00011 43.3 12.9 48 656-703 10-64 (257)
155 PLN03017 trehalose-phosphatase 89.2 2.7 5.9E-05 47.3 10.7 45 652-697 120-166 (366)
156 PLN02580 trehalose-phosphatase 88.8 0.66 1.4E-05 52.5 5.6 62 744-810 300-373 (384)
157 PLN02177 glycerol-3-phosphate 88.6 5.8 0.00013 46.9 13.6 96 664-784 111-215 (497)
158 TIGR01686 FkbH FkbH-like domai 88.4 0.96 2.1E-05 50.5 6.8 92 663-782 31-128 (320)
159 PLN02645 phosphoglycolate phos 88.1 0.85 1.8E-05 50.8 6.0 48 656-703 37-87 (311)
160 TIGR01457 HAD-SF-IIA-hyp2 HAD- 86.6 4.6 9.9E-05 43.3 10.4 49 656-704 10-61 (249)
161 COG3700 AphA Acid phosphatase 85.1 1.1 2.4E-05 44.0 4.1 86 664-778 115-205 (237)
162 PRK09456 ?-D-glucose-1-phospha 84.9 1.9 4.2E-05 44.3 6.3 97 663-780 84-181 (199)
163 PRK10563 6-phosphogluconate ph 84.3 3.3 7.2E-05 43.3 7.9 97 663-782 88-184 (221)
164 TIGR01517 ATPase-IIB_Ca plasma 83.0 31 0.00067 44.6 17.3 85 198-283 128-222 (941)
165 TIGR01993 Pyr-5-nucltdase pyri 82.4 5 0.00011 40.6 8.0 98 663-780 84-181 (184)
166 COG0241 HisB Histidinol phosph 82.4 3.3 7E-05 41.8 6.4 100 663-779 31-144 (181)
167 PRK10725 fructose-1-P/6-phosph 82.3 3.9 8.5E-05 41.4 7.3 91 668-780 92-182 (188)
168 TIGR01657 P-ATPase-V P-type AT 81.8 39 0.00084 44.4 17.6 39 245-285 248-288 (1054)
169 PHA02597 30.2 hypothetical pro 81.7 3.4 7.5E-05 42.3 6.6 92 663-780 74-170 (197)
170 PF13344 Hydrolase_6: Haloacid 81.2 1.3 2.7E-05 40.3 2.7 49 656-704 7-58 (101)
171 TIGR01452 PGP_euk phosphoglyco 81.1 14 0.00031 40.2 11.6 49 656-704 11-62 (279)
172 PF08235 LNS2: LNS2 (Lipin/Ned 80.0 7.3 0.00016 38.3 7.7 103 662-779 26-141 (157)
173 TIGR01680 Veg_Stor_Prot vegeta 74.4 13 0.00027 40.1 8.2 88 662-771 144-236 (275)
174 PF05822 UMPH-1: Pyrimidine 5' 73.3 6.5 0.00014 41.6 5.7 130 663-809 90-240 (246)
175 PF03767 Acid_phosphat_B: HAD 72.6 5.2 0.00011 42.3 4.9 89 663-772 115-207 (229)
176 COG0637 Predicted phosphatase/ 72.5 10 0.00022 39.8 7.1 98 663-781 86-183 (221)
177 PLN02423 phosphomannomutase 71.7 5.1 0.00011 42.9 4.6 39 744-783 188-231 (245)
178 COG1877 OtsB Trehalose-6-phosp 71.4 18 0.00039 39.0 8.6 123 661-783 38-228 (266)
179 TIGR01689 EcbF-BcbF capsule bi 71.1 9.3 0.0002 36.2 5.7 32 662-693 23-54 (126)
180 TIGR01684 viral_ppase viral ph 70.2 6.9 0.00015 42.5 5.1 41 664-704 146-187 (301)
181 TIGR02251 HIF-SF_euk Dullard-l 69.1 3.1 6.7E-05 41.4 2.2 43 660-703 39-81 (162)
182 PRK10444 UMP phosphatase; Prov 68.9 5.3 0.00011 42.8 4.0 45 656-700 10-54 (248)
183 PHA03398 viral phosphatase sup 65.8 9.8 0.00021 41.4 5.2 41 664-704 148-189 (303)
184 PRK10748 flavin mononucleotide 64.4 19 0.00041 38.2 7.2 92 663-783 113-207 (238)
185 TIGR01106 ATPase-IIC_X-K sodiu 64.2 2.2E+02 0.0048 37.2 18.0 208 202-420 108-326 (997)
186 COG1011 Predicted hydrolase (H 60.1 33 0.00072 35.7 8.1 92 663-778 99-193 (229)
187 TIGR01493 HAD-SF-IA-v2 Haloaci 56.7 21 0.00045 35.6 5.6 85 663-775 90-174 (175)
188 TIGR01663 PNK-3'Pase polynucle 56.6 28 0.00062 41.4 7.4 40 664-703 198-249 (526)
189 TIGR01524 ATPase-IIIB_Mg magne 56.6 3E+02 0.0066 35.3 17.1 80 205-286 95-190 (867)
190 TIGR01647 ATPase-IIIA_H plasma 56.5 1.3E+02 0.0029 37.8 13.7 192 209-421 66-269 (755)
191 PTZ00174 phosphomannomutase; P 55.6 15 0.00032 39.3 4.5 36 663-698 22-57 (247)
192 PRK14010 potassium-transportin 55.1 1.4E+02 0.0031 36.8 13.2 40 244-285 123-162 (673)
193 KOG3040|consensus 54.6 25 0.00055 35.9 5.5 51 653-703 13-66 (262)
194 PRK14194 bifunctional 5,10-met 54.2 43 0.00093 36.8 7.7 145 660-806 12-215 (301)
195 PRK15122 magnesium-transportin 51.8 4.1E+02 0.0089 34.3 17.2 209 202-420 115-351 (903)
196 PRK14179 bifunctional 5,10-met 51.5 51 0.0011 35.9 7.7 65 737-801 136-209 (284)
197 PLN03190 aminophospholipid tra 50.6 46 0.001 43.9 8.5 64 203-267 142-212 (1178)
198 PF00389 2-Hacid_dh: D-isomer 46.5 1.4E+02 0.003 28.3 9.2 45 737-783 42-89 (133)
199 PRK14188 bifunctional 5,10-met 45.1 65 0.0014 35.4 7.4 65 737-801 136-209 (296)
200 COG0647 NagD Predicted sugar p 45.0 24 0.00052 38.1 4.0 45 656-700 17-61 (269)
201 COG0474 MgtA Cation transport 43.7 5E+02 0.011 33.6 16.2 200 216-422 120-332 (917)
202 KOG0208|consensus 41.5 2.7E+02 0.0059 35.4 12.3 230 208-461 217-471 (1140)
203 TIGR01522 ATPase-IIA2_Ca golgi 41.4 7.7E+02 0.017 31.8 17.4 79 205-285 87-175 (884)
204 PRK14174 bifunctional 5,10-met 41.2 79 0.0017 34.7 7.3 139 662-801 11-214 (295)
205 PRK14170 bifunctional 5,10-met 40.9 82 0.0018 34.4 7.2 138 661-802 11-209 (284)
206 PRK10517 magnesium-transportin 40.7 4.9E+02 0.011 33.6 15.4 41 245-286 184-224 (902)
207 COG0272 Lig NAD-dependent DNA 39.5 48 0.001 40.1 5.6 75 252-346 363-439 (667)
208 PRK14169 bifunctional 5,10-met 38.9 1E+02 0.0022 33.6 7.6 138 662-801 11-207 (282)
209 PRK14182 bifunctional 5,10-met 38.7 1.1E+02 0.0023 33.4 7.7 139 661-802 10-209 (282)
210 PF03120 DNA_ligase_OB: NAD-de 38.4 17 0.00036 31.6 1.2 22 252-273 45-67 (82)
211 PF13380 CoA_binding_2: CoA bi 37.5 45 0.00097 31.1 4.1 39 664-702 64-103 (116)
212 PRK11507 ribosome-associated p 36.9 38 0.00083 28.4 3.0 26 242-267 38-63 (70)
213 PTZ00445 p36-lilke protein; Pr 35.3 56 0.0012 33.8 4.6 29 663-691 75-103 (219)
214 PF13275 S4_2: S4 domain; PDB: 34.6 23 0.0005 29.3 1.4 26 243-269 35-60 (65)
215 TIGR01456 CECR5 HAD-superfamil 34.4 1.3E+02 0.0027 33.6 7.8 48 656-703 9-64 (321)
216 PF13242 Hydrolase_like: HAD-h 33.9 60 0.0013 27.3 4.0 57 743-799 7-70 (75)
217 PRK01122 potassium-transportin 33.3 7.5E+02 0.016 30.8 14.7 72 202-282 62-135 (679)
218 PRK14166 bifunctional 5,10-met 32.6 1.4E+02 0.0029 32.7 7.3 139 662-801 11-208 (282)
219 PF15584 Imm44: Immunity prote 32.4 18 0.00039 31.7 0.5 19 259-277 13-31 (94)
220 CHL00200 trpA tryptophan synth 31.8 2.6E+02 0.0056 30.2 9.3 29 744-772 188-216 (263)
221 PLN02645 phosphoglycolate phos 31.5 2.7E+02 0.0057 30.9 9.8 41 739-779 229-270 (311)
222 PRK14190 bifunctional 5,10-met 31.4 1.4E+02 0.0031 32.5 7.3 137 661-801 12-209 (284)
223 PRK14184 bifunctional 5,10-met 31.3 2.1E+02 0.0046 31.2 8.6 137 662-801 11-212 (286)
224 PRK14189 bifunctional 5,10-met 31.1 4.7E+02 0.01 28.6 11.2 167 600-802 12-210 (285)
225 TIGR00559 pdxJ pyridoxine 5'-p 31.1 2.6E+02 0.0056 29.6 8.7 38 666-704 110-147 (237)
226 PF12710 HAD: haloacid dehalog 31.0 25 0.00054 35.4 1.4 13 445-457 1-13 (192)
227 PRK14167 bifunctional 5,10-met 30.4 1.5E+02 0.0033 32.6 7.3 137 661-801 11-212 (297)
228 PRK05265 pyridoxine 5'-phospha 30.1 1.4E+02 0.0031 31.5 6.6 38 666-704 113-150 (239)
229 PF12368 DUF3650: Protein of u 30.0 43 0.00093 22.7 1.8 15 132-146 13-27 (28)
230 PRK14191 bifunctional 5,10-met 29.4 1.6E+02 0.0035 32.1 7.3 64 737-801 135-208 (285)
231 PLN02591 tryptophan synthase 29.3 3.2E+02 0.0069 29.3 9.4 33 743-775 174-209 (250)
232 COG1188 Ribosome-associated he 29.0 55 0.0012 29.5 3.0 29 242-271 35-63 (100)
233 PF02358 Trehalose_PPase: Treh 28.5 60 0.0013 34.3 3.8 63 737-800 157-233 (235)
234 PF14336 DUF4392: Domain of un 28.4 1.5E+02 0.0033 32.5 7.0 38 666-703 63-101 (291)
235 TIGR02250 FCP1_euk FCP1-like p 27.7 98 0.0021 30.5 4.9 42 662-704 57-98 (156)
236 TIGR01494 ATPase_P-type ATPase 27.4 4.2E+02 0.009 31.5 11.1 148 245-421 53-213 (499)
237 PF06645 SPC12: Microsomal sig 27.0 2.4E+02 0.0052 24.1 6.4 19 357-375 6-24 (76)
238 PLN02897 tetrahydrofolate dehy 26.7 2.4E+02 0.0052 31.7 8.0 142 660-801 64-265 (345)
239 TIGR01116 ATPase-IIA1_Ca sarco 26.5 1.1E+03 0.025 30.4 15.5 82 200-283 38-129 (917)
240 PF12689 Acid_PPase: Acid Phos 26.3 1.1E+02 0.0024 30.6 4.9 41 663-703 45-86 (169)
241 PRK14186 bifunctional 5,10-met 26.3 2.2E+02 0.0048 31.3 7.6 137 661-801 11-209 (297)
242 TIGR01459 HAD-SF-IIA-hyp4 HAD- 26.2 64 0.0014 34.2 3.6 94 665-780 140-237 (242)
243 PLN02151 trehalose-phosphatase 25.9 1.3E+02 0.0027 34.1 5.8 63 743-810 267-341 (354)
244 TIGR00381 cdhD CO dehydrogenas 25.5 5.3E+02 0.011 29.4 10.4 134 671-822 148-296 (389)
245 PRK14187 bifunctional 5,10-met 24.8 2.3E+02 0.0049 31.2 7.3 65 737-801 138-211 (294)
246 TIGR01460 HAD-SF-IIA Haloacid 24.6 1.4E+02 0.003 31.6 5.7 47 656-702 7-57 (236)
247 PF01455 HupF_HypC: HupF/HypC 24.0 1.7E+02 0.0036 24.5 4.8 32 239-270 17-51 (68)
248 COG0078 ArgF Ornithine carbamo 24.0 6.6E+02 0.014 27.7 10.5 33 667-703 91-123 (310)
249 PF00122 E1-E2_ATPase: E1-E2 A 23.7 1.5E+02 0.0034 30.8 5.9 23 246-268 54-76 (230)
250 PRK04980 hypothetical protein; 23.6 90 0.0019 28.4 3.3 55 240-299 20-81 (102)
251 PF06341 DUF1056: Protein of u 23.4 4.2E+02 0.0092 21.8 7.3 25 161-185 3-27 (63)
252 PRK14193 bifunctional 5,10-met 22.4 2.5E+02 0.0054 30.7 7.1 139 661-801 12-211 (284)
253 KOG3085|consensus 22.2 2.8E+02 0.006 29.5 7.2 91 666-778 116-207 (237)
254 COG2503 Predicted secreted aci 21.8 4E+02 0.0088 28.3 8.0 84 663-775 122-211 (274)
255 PF06506 PrpR_N: Propionate ca 21.1 2E+02 0.0043 28.9 5.8 68 737-822 105-172 (176)
256 PF09926 DUF2158: Uncharacteri 21.1 55 0.0012 25.9 1.3 12 258-269 2-13 (53)
257 cd00860 ThrRS_anticodon ThrRS 20.4 1.7E+02 0.0037 25.1 4.6 47 657-703 6-53 (91)
258 PRK14175 bifunctional 5,10-met 20.2 1.2E+02 0.0027 33.1 4.2 139 660-801 11-209 (286)
No 1
>KOG0203|consensus
Probab=100.00 E-value=4.5e-153 Score=1286.77 Aligned_cols=859 Identities=53% Similarity=0.885 Sum_probs=824.5
Q ss_pred cHHHHHhhccccCccccCCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHH
Q psy6866 100 DVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFG 179 (961)
Q Consensus 100 ~~~~~~~l~~~~~~~~~~~~~~~l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ 179 (961)
..++++.++++.++++|..+.++++++|.+|..+|||.+++.+++.+.|||.++||++.+.|.+|++++|..|.+++|++
T Consensus 24 ~~~~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~ 103 (1019)
T KOG0203|consen 24 KKKELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIG 103 (1019)
T ss_pred hhhhHHHHhhheeeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHH
Confidence 46788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhcccCCCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCccc
Q psy6866 180 ALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVR 259 (961)
Q Consensus 180 ails~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~ 259 (961)
+++++++|++.....+....+++|.+++++.+++++++..|||+.+..+.++.++++.|..++|+|||+...+.++||||
T Consensus 104 a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVv 183 (1019)
T KOG0203|consen 104 AILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVV 183 (1019)
T ss_pred HHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhccc
Confidence 99999999998877777777889999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEecCCCeeeccEEEEeeCCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChh
Q psy6866 260 GDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVM 339 (961)
Q Consensus 260 GDIV~l~~Gd~IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~ 339 (961)
||+|.++.||+||||.+++++.++++|+|+|||||+|..+.+...+.++++..|+.|.+|.+++|.+.|+|++||.+|.+
T Consensus 184 GD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~ 263 (1019)
T KOG0203|consen 184 GDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVM 263 (1019)
T ss_pred ccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHH
Q psy6866 340 GKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLT 419 (961)
Q Consensus 340 g~i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~ 419 (961)
|+|+.+.......++|+++++++|..++..+++++++.+|++....++.|..++.+.+.++++.+|+||+.+++.++...
T Consensus 264 G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~Ltlt 343 (1019)
T KOG0203|consen 264 GRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCLTLT 343 (1019)
T ss_pred eehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhHHHH
Confidence 99999999989999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred HHHhhcccccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccC-CchHHHHHHHHHHH
Q psy6866 420 AKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFE-TNTTYKTLVRAACL 498 (961)
Q Consensus 420 ~~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~ 498 (961)
++||+++++++|++.++|+||+.++||+|||||||+|+|+|.++|+++.....+...+..++.+. .+..+..+.+++++
T Consensus 344 akrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~l 423 (1019)
T KOG0203|consen 344 AKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATL 423 (1019)
T ss_pred HHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988877766666665544 46788899999999
Q ss_pred ccCceecCCCCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCC---CeEEEEE
Q psy6866 499 CSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPL---NKYFLLM 575 (961)
Q Consensus 499 c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~---~~~~~~~ 575 (961)
||.+.+.+++.+.|..+....||+.|.||++|+.....+....|+.++++.++||||.+|++.+++...+ .++.+.+
T Consensus 424 Cn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~m 503 (1019)
T KOG0203|consen 424 CNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVM 503 (1019)
T ss_pred hCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeee
Confidence 9999999999999999999999999999999999877777889999999999999999999999998754 4688999
Q ss_pred eCChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEE
Q psy6866 576 KGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLI 655 (961)
Q Consensus 576 KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~l 655 (961)
|||||.++++|+.+.. +|++.+++++.++.+.+...++...|.||++|+++.++.++++....++.+..++.-.++.|+
T Consensus 504 KGape~il~~CSTi~i-~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~Fl 582 (1019)
T KOG0203|consen 504 KGAPERILDRCSTILI-NGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFL 582 (1019)
T ss_pred cCChHHHHhhccceee-cCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhcccc
Confidence 9999999999999988 899999999999999999999999999999999999999999999889988889999999999
Q ss_pred eeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC---------------------CceeEe
Q psy6866 656 GLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS---------------------DDNVFT 714 (961)
Q Consensus 656 G~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~---------------------~~~v~~ 714 (961)
|++++.||+|..+++++..||.|||+|+|+|||++.||+++|++.||+.++.. .+.|++
T Consensus 583 Gl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~Vih 662 (1019)
T KOG0203|consen 583 GLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIH 662 (1019)
T ss_pred chhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEe
Confidence 99999999999999999999999999999999999999999999998775443 367899
Q ss_pred chhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhcc
Q psy6866 715 GTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTA 794 (961)
Q Consensus 715 g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aa 794 (961)
|.++.+++.+++++++.+.++.||||.||+||+.||+.+|++|.+|+++|||.||+||||+||||||||++|+|++|+||
T Consensus 663 G~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAA 742 (1019)
T KOG0203|consen 663 GSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAA 742 (1019)
T ss_pred cccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccC
Q psy6866 795 DMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEK 874 (961)
Q Consensus 795 d~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~ 874 (961)
|+||+||||++|+..+++||.+|+|+||.+.|.++.|+.++.+++++.++|+|+|+.++++|.++|++|++||++||||+
T Consensus 743 DmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~ 822 (1019)
T KOG0203|consen 743 DMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEK 822 (1019)
T ss_pred ceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccccccccCCC--CccccccCccc
Q psy6866 875 PESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYFHVMYDAGWDPMDLLNIRKSWESN--NNLEDSYHKMW 952 (961)
Q Consensus 875 ~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 952 (961)
|+.++|.|+||+|+.++++|.+++.++|+|+|+++++++|++||+.++.+||.|..+.|++..|++. +|++++|||+|
T Consensus 823 aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeW 902 (1019)
T KOG0203|consen 823 AESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEW 902 (1019)
T ss_pred chhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred ccccccc
Q psy6866 953 TRTERTW 959 (961)
Q Consensus 953 ~~~~~~~ 959 (961)
+|++|+.
T Consensus 903 tyeqRk~ 909 (1019)
T KOG0203|consen 903 TYEQRKY 909 (1019)
T ss_pred cHHHHHH
Confidence 9999974
No 2
>KOG0204|consensus
Probab=100.00 E-value=2.9e-145 Score=1224.90 Aligned_cols=852 Identities=29% Similarity=0.419 Sum_probs=705.1
Q ss_pred ccccccccccCCCCccceeEEeecccccccccccccccchhhhhhhhcccccCCC--cccccccHHHHHHHhhhhccccH
Q psy6866 24 GSRKKKSWSSKHNTTKDVNIYMSSATKNNYFEKLSTQSKTFFNTRKASLEKKSHP--RFVLDCSKKSILRFIHKEKEMDV 101 (961)
Q Consensus 24 ~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 101 (961)
..||+ ...++.+.+.|.||.+.+-+...+.+...-+.......+++-.....+. -+.+....+++.+.....
T Consensus 19 ~~~~~-~a~~~~~~~~~~~~~~~l~~~~~~~~~r~~~r~~~~~~~a~~~~~~~~~~~e~~~~i~~e~l~~i~~~~----- 92 (1034)
T KOG0204|consen 19 LQRWR-LAYIVLEASRRFRFGASLKKLRELMEPRRKIRSAVLVSKAAALFIDAGSRTEYTLGIGAEELVKIVKEH----- 92 (1034)
T ss_pred hhhhh-hhhhhcccchhhccccCHHHHHHHHHHHhhhhhhhcccchhhhhhccccccccccccCHHHHHHHhhcc-----
Confidence 44555 6668888888888888766554444444322222222333222222211 112223334454432221
Q ss_pred HHHHhhccccCccccCCCHHHHHHHhCCCCCCCCCH--HHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHH
Q psy6866 102 AQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSE--LEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFG 179 (961)
Q Consensus 102 ~~~~~l~~~~~~~~~~~~~~~l~~~l~t~~~~GLs~--~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ 179 (961)
....|+. .+++++++++|+|||..||+. ++..+|++.||.|.+++++++++|++.|+.+.+.-.++|.++
T Consensus 93 -~~~~L~~-------~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~va 164 (1034)
T KOG0204|consen 93 -DLKALNA-------YGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVA 164 (1034)
T ss_pred -chhhhhh-------ccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHH
Confidence 1222222 589999999999999999996 788999999999999999999999999999777777888888
Q ss_pred HHHHHHHhhhhcccCCCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCccc
Q psy6866 180 ALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVR 259 (961)
Q Consensus 180 ails~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~ 259 (961)
|++|+.. ++......++|+++..+.+.++++++++++.+|.|+.+.++..+.-+ ..++.|+|||+.++|+..||||
T Consensus 165 AvvSl~l-gi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~---~~k~~ViR~G~r~~isI~diVV 240 (1034)
T KOG0204|consen 165 AVVSLGL-GIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKR---NIKFQVIRGGRRQQISIYDLVV 240 (1034)
T ss_pred HHHHHhh-hhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhh---ceEEEEEECCEEEEEEEeeeee
Confidence 8888654 33333334455555555556667778899999999988777653322 3589999999999999999999
Q ss_pred ceEEEecCCCeeeccEEEEeeCCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChh
Q psy6866 260 GDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVM 339 (961)
Q Consensus 260 GDIV~l~~Gd~IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~ 339 (961)
|||+.|+.||.+||||++++|++|.+|||+|||||+++.|.... +.++++||++.+|+++++|+.+|.+|+.
T Consensus 241 GDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~--------dPfLlSGTkv~eGsgkMlVTaVGmnt~w 312 (1034)
T KOG0204|consen 241 GDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDK--------DPFLLSGTKVMEGSGKMLVTAVGMNTQW 312 (1034)
T ss_pred ccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCCC--------CCeEeecceeecCcceEEEEEeeecchH
Confidence 99999999999999999999999999999999999999998742 2369999999999999999999999999
Q ss_pred hhHHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---h---------cc--------HHHHHHHHHHh
Q psy6866 340 GKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYI---G---------YN--------WLNACVYVIGI 399 (961)
Q Consensus 340 g~i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~---~---------~~--------~~~~~~~~i~v 399 (961)
|+++..+.....++||+|-++++++..+..+.++++++.+++.... + .. +...+..++++
T Consensus 313 G~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTi 392 (1034)
T KOG0204|consen 313 GIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTI 392 (1034)
T ss_pred hhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEE
Confidence 9999999988889999999999999998888777776666554321 1 11 23445566779
Q ss_pred hhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCccccc
Q psy6866 400 IVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVD 479 (961)
Q Consensus 400 lv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~ 479 (961)
+|+|+|+|||+|+++++++++++|+++++|||++++||+||++++||+|||||||.|+|+|++.|++++.+..+....
T Consensus 393 lVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~-- 470 (1034)
T KOG0204|consen 393 LVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKS-- 470 (1034)
T ss_pred EEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCccc--
Confidence 999999999999999999999999999999999999999999999999999999999999999999988876433221
Q ss_pred ccccCCchHHHHHHHHHHHccCceecCCCCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCee
Q psy6866 480 IQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKF 559 (961)
Q Consensus 480 ~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~ 559 (961)
... +....+.++...+.+++.+...++.. .....+.|+|+|+|+|.|....+.+++..|.+....+.+||||.+|+
T Consensus 471 -~~l-~~~~~~ll~~gI~~Nt~g~v~~~~~~--g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~ 546 (1034)
T KOG0204|consen 471 -SNL-PPSLLDLLLQGIAQNTTGSVVKPEKG--GEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKR 546 (1034)
T ss_pred -ccC-CHHHHHHHHHHHhhcCCCeEEecCCC--CcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccce
Confidence 111 22334456667777665544332221 12457889999999999999999999999999999999999999999
Q ss_pred EEEEEEcCCCeEEEEEeCChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCcc
Q psy6866 560 HLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFK 639 (961)
Q Consensus 560 ~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~ 639 (961)
|+++++.+++..++|+|||+|+|+..|+.+...+|+..+++++.+..+++.++.||++|+|++|+||+++.... ..+
T Consensus 547 ~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~---~~~ 623 (1034)
T KOG0204|consen 547 MGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGP---DEE 623 (1034)
T ss_pred eeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCC---CCC
Confidence 99999987777239999999999999999999999999999999999999999999999999999999865431 111
Q ss_pred CCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhc
Q psy6866 640 FSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLR 719 (961)
Q Consensus 640 ~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~ 719 (961)
.+.+..+..+.||+++|++|++||+||+++++|+.||+|||.|.|+||||..||++||.+|||.+++.. ..+++|++|+
T Consensus 624 ~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d-~~~lEG~eFr 702 (1034)
T KOG0204|consen 624 PSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGD-FLALEGKEFR 702 (1034)
T ss_pred CCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCc-cceecchhhh
Confidence 233344567899999999999999999999999999999999999999999999999999999988754 7899999999
Q ss_pred cCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEee
Q psy6866 720 KITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILM 799 (961)
Q Consensus 720 ~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~ 799 (961)
++++++.++++++.+ |+||.+|.||+.+|+.|+++|++||++|||+||+|||++||||+|||+.|+|+|||+||+|++
T Consensus 703 ~~s~ee~~~i~pkl~--VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~ 780 (1034)
T KOG0204|consen 703 ELSQEERDKIWPKLR--VLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIIL 780 (1034)
T ss_pred hcCHHHHHhhhhhhe--eeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEE
Confidence 999999999999987 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCCCCCc
Q psy6866 800 DDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNI 879 (961)
Q Consensus 800 ~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~ 879 (961)
||||++|+++++|||+.|+||+||+||+|+.|+++++..|..++.....||+++|+||+|||||++++||||+|||++++
T Consensus 781 DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~L 860 (1034)
T KOG0204|consen 781 DDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDEL 860 (1034)
T ss_pred cCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHH
Confidence 99999999999999999999999999999999999998888888888999999999999999999999999999999999
Q ss_pred ccCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHH
Q psy6866 880 MSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFL 915 (961)
Q Consensus 880 ~~~~P~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 915 (961)
|.|+|..+ .++++++-|+...+.| .+++.+..|.
T Consensus 861 m~RkP~GR-~~~LIt~tMwknil~q-a~YQl~vl~i 894 (1034)
T KOG0204|consen 861 MKRKPVGR-TKPLITRTMWKNILGQ-AVYQLIVLFI 894 (1034)
T ss_pred hcCCCCCC-CCcchHHHHHHHHHHH-HHHHHHHHHH
Confidence 99999864 6888886655443332 4444444443
No 3
>KOG0202|consensus
Probab=100.00 E-value=5.7e-145 Score=1225.06 Aligned_cols=788 Identities=36% Similarity=0.546 Sum_probs=688.8
Q ss_pred ccCCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhcccC
Q psy6866 115 EHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETN 194 (961)
Q Consensus 115 ~~~~~~~~l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~~~~~~~~~ 194 (961)
.|..+.++.+..|+|++.+|||.+|+..|++.||+|+++....+|+|+++++||-+++..+|+.+|++|++...
T Consensus 4 ~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~------ 77 (972)
T KOG0202|consen 4 AHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLAD------ 77 (972)
T ss_pred hhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHh------
Confidence 45688999999999999999999999999999999999999999999999999999999999999999987632
Q ss_pred CCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecCCCeeecc
Q psy6866 195 EEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPAD 274 (961)
Q Consensus 195 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD 274 (961)
|..+++|++++++++.+.+|||+++++++++|+++.|+.++|+|+|+.+.+++.||||||||.|+-||+||||
T Consensus 78 -------~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPAD 150 (972)
T KOG0202|consen 78 -------FDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPAD 150 (972)
T ss_pred -------cccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccc
Confidence 2346677777788888999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeCCceeeccCccccccceeccCCCCC----CccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhcccc
Q psy6866 275 IRLIEIQDLKAENSSLTGEVEPVTCTLGATN----SFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLE 350 (961)
Q Consensus 275 ~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~----~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~ 350 (961)
.+|++..++.+|||+|||||.||.|...... ....+++|++|+||.|..|.++|+|+.||.+|.+|+|.+.++..+
T Consensus 151 lRl~e~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e 230 (972)
T KOG0202|consen 151 LRLIEAKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATE 230 (972)
T ss_pred eeEEeeeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccC
Confidence 9999999999999999999999999765432 223467899999999999999999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHH--HHHh-----h---ccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHH
Q psy6866 351 KKTTPIEQEVQHFMRLISMWALTLGAICFLL--ALYI-----G---YNWLNACVYVIGIIVANVPEGLLATLTVSLTLTA 420 (961)
Q Consensus 351 ~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~--~~~~-----~---~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~ 420 (961)
..+||+|+.++.|...+..+..++++.++++ .++. + ..+...+..++++.++++|+|||+.++++++.+.
T Consensus 231 ~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~ 310 (972)
T KOG0202|consen 231 SPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGT 310 (972)
T ss_pred CCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhH
Confidence 9999999999999999884444444433333 2222 2 3456778889999999999999999999999999
Q ss_pred HHhhcccccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCccccccccc-----------------
Q psy6866 421 KRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNF----------------- 483 (961)
Q Consensus 421 ~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~----------------- 483 (961)
+||+|++++||++.++|+||.+++||+|||||||+|+|++.++|+.+............+..|
T Consensus 311 ~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~ 390 (972)
T KOG0202|consen 311 RRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKA 390 (972)
T ss_pred HHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccc
Confidence 999999999999999999999999999999999999999999998765433221111111000
Q ss_pred CCchHHHHHHHHHHHccCceecCCCCCcccccccccCChhHHHHHHhhcccccchhh---------------HhhcCCeE
Q psy6866 484 ETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQD---------------VRNTFPKV 548 (961)
Q Consensus 484 ~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~---------------~~~~~~~~ 548 (961)
...+.+..++.++++||.+....+.. ..+...|.|+|.||..++.+.+..... +...++++
T Consensus 391 ~~~~~l~~l~~i~~lCNda~v~~~~~----~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~ 466 (972)
T KOG0202|consen 391 GDNDLLQELAEICALCNDATVEYNDA----DCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKI 466 (972)
T ss_pred cccHHHHHHHHHHHhhhhhhhhcCch----hhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhhe
Confidence 03456788999999999887665432 345678999999999998875432211 33456778
Q ss_pred EEecCCCCCeeEEEEEEcCCCe--EEEEEeCChHHHHHHhhcccccCC-cccccCHHHHHHHHHHHHHHHHhcCceeeEe
Q psy6866 549 TEVPFNSLNKFHLTVHFSPLNK--YFLLMKGAPEVIMERCTTMMAESD-KEAFLTAEKKYELEDKIKLFASKGERVLAFA 625 (961)
Q Consensus 549 ~~~~F~s~~k~~~~v~~~~~~~--~~~~~KGa~e~Il~~c~~~~~~~~-~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A 625 (961)
.++||+|+||+|++......+. +.+|+|||+|.|+++|++++..+| ...++++..|+.+.+...+|+++|+||+|+|
T Consensus 467 ~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA 546 (972)
T KOG0202|consen 467 AELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALA 546 (972)
T ss_pred eEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEE
Confidence 9999999999999998875553 899999999999999988887666 4599999999999999999999999999999
Q ss_pred eeecCCCCCCCCc-cCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy6866 626 DLHLGQNNFPVNF-KFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILS 704 (961)
Q Consensus 626 ~~~l~~~~~~~~~-~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~ 704 (961)
++..+.. .+... ..+...+...|+||+|+|++|+.||||++++++|+.|+++||+|+|+|||+..||.+||+++|+..
T Consensus 547 ~~~~~~~-~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~ 625 (972)
T KOG0202|consen 547 SKDSPGQ-VPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFS 625 (972)
T ss_pred ccCCccc-ChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCc
Confidence 9876531 11111 112234445789999999999999999999999999999999999999999999999999999987
Q ss_pred CCCC-CceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeec
Q psy6866 705 ETSS-DDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMG 783 (961)
Q Consensus 705 ~~~~-~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg 783 (961)
+..+ ...+++|.+++++++++.+....+.. +|+|++|.+|.+||+.||++|++|||+|||+||+||||.||||||||
T Consensus 626 ~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~--vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG 703 (972)
T KOG0202|consen 626 EDEDVSSMALTGSEFDDLSDEELDDAVRRVL--VFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMG 703 (972)
T ss_pred CCccccccccchhhhhcCCHHHHHHHhhcce--EEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeec
Confidence 6543 35789999999999999999888764 99999999999999999999999999999999999999999999999
Q ss_pred CCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhh
Q psy6866 784 ITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTD 863 (961)
Q Consensus 784 ~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d 863 (961)
++|+|+||+|||+||.||||++|+.|+++||.+|+||++|+.|+++.|+.++..+++...+++|.||+|+|+||+|++||
T Consensus 704 ~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtD 783 (972)
T KOG0202|consen 704 ISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTD 783 (972)
T ss_pred CCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhhhcccCCCCCcccCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy6866 864 MWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYFHVMYDA 924 (961)
Q Consensus 864 ~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 924 (961)
.+||.+|++|||++|+|+||||++ .+++++.++|.. |+.+|++..++++++|.+.|++.
T Consensus 784 G~PA~aLG~ep~D~DiM~kpPR~~-~~~iit~~l~~r-~l~~g~~vg~~Tv~~f~~~~~~~ 842 (972)
T KOG0202|consen 784 GPPATALGFEPVDPDIMKKPPRDS-KDGIITGWLIFR-YLAIGIIVGVATVGVFVWWMYGA 842 (972)
T ss_pred CCchhhcCCCCCChhHHhCCCCCC-CCCeeeHHHHHH-HHHhheeeeeeEhHhhhHHHhcC
Confidence 999999999999999999999986 689999998887 55679998988888888887753
No 4
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=2.4e-136 Score=1280.87 Aligned_cols=848 Identities=52% Similarity=0.854 Sum_probs=748.8
Q ss_pred hccccCccccCCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy6866 107 LKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLA 186 (961)
Q Consensus 107 l~~~~~~~~~~~~~~~l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~ 186 (961)
..+...++||..+.+++++.|+|++.+|||++|+++|+++||+|++++++++++|+.|++++++++.++||++++++++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~ 88 (997)
T TIGR01106 9 LKKEVEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLA 88 (997)
T ss_pred hhhhccCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 44456788999999999999999999999999999999999999999988899999999999999999999999998876
Q ss_pred hhhhcccCCCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEec
Q psy6866 187 YLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLK 266 (961)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~ 266 (961)
+++...........+|+.+++++++++++++++++|++|+++.+++++++.+.+++|+|||++++|+++||||||+|.|+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~ 168 (997)
T TIGR01106 89 YGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVK 168 (997)
T ss_pred HHHhhccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEEC
Confidence 65532221212224567788888899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeeccEEEEeeCCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhh
Q psy6866 267 IGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLT 346 (961)
Q Consensus 267 ~Gd~IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~ 346 (961)
+||+|||||+|++|+++.||||+|||||.|+.|.+++....+++.+|++|+||.+++|++.++|++||.+|.+|++.+++
T Consensus 169 ~Gd~IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~ 248 (997)
T TIGR01106 169 GGDRIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLA 248 (997)
T ss_pred CCCEEeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhh
Confidence 99999999999999889999999999999999998876566778899999999999999999999999999999999988
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcc
Q psy6866 347 NRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASK 426 (961)
Q Consensus 347 ~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~ 426 (961)
...+.+++|+++.++++...++.+++++++++++++.+.+.+|...+.+++++++++|||+||++++++++.++++|+++
T Consensus 249 ~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~ 328 (997)
T TIGR01106 249 SGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARK 328 (997)
T ss_pred hhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHC
Confidence 88888899999999999999999888888888887777778898999999999999999999999999999999999999
Q ss_pred cccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccC-CchHHHHHHHHHHHccCceec
Q psy6866 427 NCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFE-TNTTYKTLVRAACLCSKAEFE 505 (961)
Q Consensus 427 ~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~c~~~~~~ 505 (961)
|++||+++++|+||++++||||||||||+|+|+|.+++.++..+..+.........++ ....++.++.++++||++.+.
T Consensus 329 ~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~ 408 (997)
T TIGR01106 329 NCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFK 408 (997)
T ss_pred CcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeec
Confidence 9999999999999999999999999999999999999998877654332211111122 123455688899999988776
Q ss_pred CCCCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcC---CCeEEEEEeCChHHH
Q psy6866 506 PNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSP---LNKYFLLMKGAPEVI 582 (961)
Q Consensus 506 ~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~---~~~~~~~~KGa~e~I 582 (961)
.+...+|...+...|||+|.|+++++.+.+.+....+..++.+.++||+|+||+|++++... ++++++|+|||||.|
T Consensus 409 ~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~I 488 (997)
T TIGR01106 409 AGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERI 488 (997)
T ss_pred cccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHH
Confidence 55555566666778999999999998866666666778899999999999999999888642 346889999999999
Q ss_pred HHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecC
Q psy6866 583 MERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYD 662 (961)
Q Consensus 583 l~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D 662 (961)
+++|+++.. +|...+++++.++.+.+.+++|+++|+||+++|++.++.++++....++.+..+..|+||+|+|+++++|
T Consensus 489 l~~c~~~~~-~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~D 567 (997)
T TIGR01106 489 LERCSSILI-HGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMID 567 (997)
T ss_pred HHHhhHHhc-CCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccC
Confidence 999998764 7888899999999999999999999999999999998765443322223233344589999999999999
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC---------------------CceeEechhhccC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS---------------------DDNVFTGTDLRKI 721 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~---------------------~~~v~~g~~~~~~ 721 (961)
|+|++++++|++|+++||+++|+|||+..+|.++|+++|+..++.. ...+++|.++..+
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l 647 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM 647 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC
Confidence 9999999999999999999999999999999999999999865321 1379999999999
Q ss_pred CHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecC
Q psy6866 722 TDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDD 801 (961)
Q Consensus 722 ~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~ 801 (961)
+++++++++.+++..||||++|+||.++|+.+|+.|++|+|+|||.||+||||+||||||||++|+|+|+++||++++||
T Consensus 648 ~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd 727 (997)
T TIGR01106 648 TSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDD 727 (997)
T ss_pred CHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecC
Confidence 99999999988777899999999999999999999999999999999999999999999999889999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCCCCCccc
Q psy6866 802 NFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMS 881 (961)
Q Consensus 802 ~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~~~ 881 (961)
||++|+.++++||++|+|++++++|.++.|+..+++++++.+++.|+|++++|+||+|+++|++|+++|++|||++++|+
T Consensus 728 ~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~ 807 (997)
T TIGR01106 728 NFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMK 807 (997)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccccccccCCC--CccccccCcccccc
Q psy6866 882 REPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYFHVMYDAGWDPMDLLNIRKSWESN--NNLEDSYHKMWTRT 955 (961)
Q Consensus 882 ~~P~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 955 (961)
|||++++.+++++++++..+++..|++++++.|++|++.++++||.+.+++++...|.+. ++....+++.|+++
T Consensus 808 ~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 883 (997)
T TIGR01106 808 RQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYE 883 (997)
T ss_pred CCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchh
Confidence 999987778999998887777778999999999999998888999998888876666543 33334566666543
No 5
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=7.3e-131 Score=1226.60 Aligned_cols=788 Identities=31% Similarity=0.472 Sum_probs=673.4
Q ss_pred ccccCCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhcc
Q psy6866 113 IDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAE 192 (961)
Q Consensus 113 ~~~~~~~~~~l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~~~~~~~ 192 (961)
.+||..+.+++.+.|+|++.+|||++|+++|+++||+|++++++++++|..++++|++++.++|+++++++++.
T Consensus 5 ~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~------ 78 (1053)
T TIGR01523 5 NAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAM------ 78 (1053)
T ss_pred CchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHH------
Confidence 46889999999999999998999999999999999999999988899999999999999999999999988764
Q ss_pred cCCCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecCCCeee
Q psy6866 193 TNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVP 272 (961)
Q Consensus 193 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IP 272 (961)
..|..+++++++++++++++++||+++++.+++|+++.+++++|+|||++++|+++||||||||.|++||+||
T Consensus 79 -------~~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VP 151 (1053)
T TIGR01523 79 -------HDWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIP 151 (1053)
T ss_pred -------hhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEee
Confidence 2456788888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEeeCCceeeccCccccccceeccCCCCC----Cc-cccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhc
Q psy6866 273 ADIRLIEIQDLKAENSSLTGEVEPVTCTLGATN----SF-AVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTN 347 (961)
Q Consensus 273 aD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~----~~-~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~ 347 (961)
|||+|++++++.||||+|||||.||.|.+.... .. ..++.|++|+||.|++|+++++|++||.+|.+|+|+.++.
T Consensus 152 AD~rLi~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~ 231 (1053)
T TIGR01523 152 ADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQ 231 (1053)
T ss_pred ccEEEEEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHh
Confidence 999999999999999999999999999875321 11 2356799999999999999999999999999999998875
Q ss_pred cccC-----------------------------------CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH
Q psy6866 348 RLEK-----------------------------------KTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNA 392 (961)
Q Consensus 348 ~~~~-----------------------------------~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~ 392 (961)
.... .+||+|+++++++.+++.++++++++++++... ..+...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~--~~~~~~ 309 (1053)
T TIGR01523 232 GDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF--DVDKEV 309 (1053)
T ss_pred hhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hhhHHH
Confidence 4221 249999999999999988888877776665432 123567
Q ss_pred HHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccceeEEEecCcCccccCceEEEEEEEcc-eeee
Q psy6866 393 CVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNR-EIYH 471 (961)
Q Consensus 393 ~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~-~~~~ 471 (961)
+.++++++++++|++||++++++++++++||+++|++||+++++|+||++++||+|||||||+|+|+|+++|.++ ..+.
T Consensus 310 ~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~ 389 (1053)
T TIGR01523 310 AIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTIS 389 (1053)
T ss_pred HHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEE
Confidence 778899999999999999999999999999999999999999999999999999999999999999999998764 2222
Q ss_pred ecCc---cccc-c-------------------------------cccC-----CchHHHHHHHHHHHccCceecCCCCCc
Q psy6866 472 VKNG---VDVD-I-------------------------------QNFE-----TNTTYKTLVRAACLCSKAEFEPNQDNI 511 (961)
Q Consensus 472 ~~~~---~~~~-~-------------------------------~~~~-----~~~~~~~l~~~~~~c~~~~~~~~~~~~ 511 (961)
.+.. .... + ...+ ....+..++.++++||++.+..+...
T Consensus 390 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~- 468 (1053)
T TIGR01523 390 IDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDAT- 468 (1053)
T ss_pred ecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCC-
Confidence 2110 0000 0 0000 01235668889999998776432111
Q ss_pred ccccccccCChhHHHHHHhhcccccch------hhH-------------------hhcCCeEEEecCCCCCeeEEEEEEc
Q psy6866 512 PMRERKASGDATEVGILHFIQPRIKSI------QDV-------------------RNTFPKVTEVPFNSLNKFHLTVHFS 566 (961)
Q Consensus 512 ~~~~~~~~g~~~e~all~~~~~~~~~~------~~~-------------------~~~~~~~~~~~F~s~~k~~~~v~~~ 566 (961)
..+...|||+|.|++.++.+.+.+. ... +..++++.++||+|+||+|+++++.
T Consensus 469 --~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~ 546 (1053)
T TIGR01523 469 --DCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYED 546 (1053)
T ss_pred --CceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEe
Confidence 1234579999999999987654321 111 2346789999999999999999986
Q ss_pred CCC-eEEEEEeCChHHHHHHhhcccccCC-cccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCC-ccCCCC
Q psy6866 567 PLN-KYFLLMKGAPEVIMERCTTMMAESD-KEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVN-FKFSTD 643 (961)
Q Consensus 567 ~~~-~~~~~~KGa~e~Il~~c~~~~~~~~-~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~-~~~~~~ 643 (961)
+++ .+++|+|||||.|+++|+.+...+| ...+++++.++++.+.+++|+++|+||+|+|||.++.+++..+ .+....
T Consensus 547 ~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~ 626 (1053)
T TIGR01523 547 NHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETL 626 (1053)
T ss_pred CCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhcccc
Confidence 544 5889999999999999997765444 4678999999999999999999999999999999875432111 000011
Q ss_pred CCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC-------CceeEech
Q psy6866 644 PMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS-------DDNVFTGT 716 (961)
Q Consensus 644 ~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~-------~~~v~~g~ 716 (961)
..+.+|+||+|+|+++|+||+|++++++|+.|+++||+|+|+|||++.||.++|+++||..++.. ...+++|.
T Consensus 627 ~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~ 706 (1053)
T TIGR01523 627 NRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGS 706 (1053)
T ss_pred chhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehH
Confidence 12346899999999999999999999999999999999999999999999999999999754211 24799999
Q ss_pred hhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccce
Q psy6866 717 DLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADM 796 (961)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~ 796 (961)
++..+++++++++.... .||||++|+||.++|+.+|++|++|+|||||.||+|||++||||||||++|+|+|+++||+
T Consensus 707 ~l~~l~~~~l~~~~~~~--~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADi 784 (1053)
T TIGR01523 707 QFDALSDEEVDDLKALC--LVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDI 784 (1053)
T ss_pred HhhhcCHHHHHHHhhcC--eEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCE
Confidence 99999999999888765 4999999999999999999999999999999999999999999999998999999999999
Q ss_pred EeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHh----cC-CchhHHHHHHHHHHhhhhhhHhhhc
Q psy6866 797 ILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFL----GI-PLPVSTVTVLCIDLGTDMWPAVSLA 871 (961)
Q Consensus 797 vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~~~~~~~----~~-~~pl~~~q~l~i~li~d~~~~lal~ 871 (961)
++++|||.+|+.++.+||++|+|++|++.|.++.|+..+++++++.++ |. ++||+|+|+||+|+++|.+|+++|+
T Consensus 785 vl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~ 864 (1053)
T TIGR01523 785 VLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLG 864 (1053)
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999988888887 34 5899999999999999999999999
Q ss_pred ccCCCCCcccCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy6866 872 YEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYFHVMY 922 (961)
Q Consensus 872 ~e~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 922 (961)
+|||++++|+|||+++ .+++++++++.. ++..|++++++++++|+++++
T Consensus 865 ~e~~~~~~m~~~Pr~~-~~~l~~~~~~~~-~~~~g~~~~~~~l~~~~~~~~ 913 (1053)
T TIGR01523 865 LEKAAPDLMDRLPHDN-EVGIFQKELIID-MFAYGFFLGGSCLASFTGILY 913 (1053)
T ss_pred cCCCChhHHhcCCCCC-CccccCHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999975 678999887765 445699999988888876543
No 6
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.5e-130 Score=1206.65 Aligned_cols=774 Identities=40% Similarity=0.599 Sum_probs=688.9
Q ss_pred ccccCCCHH--HHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhh
Q psy6866 113 IDEHLIPLE--ELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLE 190 (961)
Q Consensus 113 ~~~~~~~~~--~l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~~~~~ 190 (961)
..+|..+.+ ++...+.+++..||+.+|+.+|++.||+|.++..+..+.|..++.+|++++..+|++++++++....+.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~ 100 (917)
T COG0474 21 ETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWV 100 (917)
T ss_pred ccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 456667777 899999999999999999999999999999999888899999999999999999999988887642211
Q ss_pred cccCCCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecCCCe
Q psy6866 191 AETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDK 270 (961)
Q Consensus 191 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~ 270 (961)
. ......+++.++++++++.++||+++++.+++++++.+..++|+|||++++|+++||||||||.|++||+
T Consensus 101 ~---------~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~ 171 (917)
T COG0474 101 D---------AGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDV 171 (917)
T ss_pred c---------cCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCc
Confidence 0 0023345566777788889999999999999999999999999999999999999999999999999999
Q ss_pred eeccEEEEeeCCceeeccCccccccceeccCCCCCC--cc--ccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhh
Q psy6866 271 VPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNS--FA--VESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLT 346 (961)
Q Consensus 271 IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~--~~--~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~ 346 (961)
||||++|++++++.||||+|||||.|+.|.+..... .+ .++.|++|+||.|.+|++.|+|++||.+|.+|+++.++
T Consensus 172 vPAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~ 251 (917)
T COG0474 172 VPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLL 251 (917)
T ss_pred cccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhh
Confidence 999999999999999999999999999998764431 11 36789999999999999999999999999999999998
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-HHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhc
Q psy6866 347 NRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYN-WLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLAS 425 (961)
Q Consensus 347 ~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~-~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k 425 (961)
.......+|+++.++++...+..++++++++.+++..+.+.. |...+.++++++++++|++||+.++++++.++.+|++
T Consensus 252 ~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak 331 (917)
T COG0474 252 PTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAK 331 (917)
T ss_pred ccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh
Confidence 887688999999999999999999999999988888776555 8999999999999999999999999999999999999
Q ss_pred ccccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceec
Q psy6866 426 KNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFE 505 (961)
Q Consensus 426 ~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~ 505 (961)
++++||+++++|+||++++||||||||||+|+|+|.+++..+.. .+.+......++....++..+++||+....
T Consensus 332 ~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~ 405 (917)
T COG0474 332 DNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGG------KDIDDKDLKDSPALLRFLLAAALCNSVTPE 405 (917)
T ss_pred ccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCc------ccccccccccchHHHHHHHHHHhcCccccc
Confidence 99999999999999999999999999999999999999987410 000101111234445688899999987654
Q ss_pred CCCCCcccccccccCChhHHHHHHhhccccc--chhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHH
Q psy6866 506 PNQDNIPMRERKASGDATEVGILHFIQPRIK--SIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIM 583 (961)
Q Consensus 506 ~~~~~~~~~~~~~~g~~~e~all~~~~~~~~--~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il 583 (961)
.+ + ++..|||+|.|+++++.+.+. +....+..++++.++||+|.||||+++++..++++++++|||||.|+
T Consensus 406 ~~-~------~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il 478 (917)
T COG0474 406 KN-G------WYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVIL 478 (917)
T ss_pred cc-C------ceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHH
Confidence 33 2 577899999999999998776 67777778889999999999999999999777779999999999999
Q ss_pred HHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCC
Q psy6866 584 ERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDP 663 (961)
Q Consensus 584 ~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~ 663 (961)
++|++. +...+++++.++.+++..++|+++|+||+++|||.++..+... .. +..|+||+|+|+++|+||
T Consensus 479 ~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~------~~-~~~E~dl~~lGl~g~~Dp 547 (917)
T COG0474 479 ERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDD------EV-DEIESDLVFLGLTGIEDP 547 (917)
T ss_pred HHhccc----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccc------hh-hhhhccceeehhhhccCC
Confidence 999976 6777889999999999999999999999999999765432111 11 457899999999999999
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCH
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSP 743 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p 743 (961)
||++++++|+.|++|||++||+||||+.||++||++||+..+... ..+++|.++..++++++.+.++++. ||||++|
T Consensus 548 pr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~-~~vi~G~el~~l~~~el~~~~~~~~--VfARvsP 624 (917)
T COG0474 548 PREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAES-ALVIDGAELDALSDEELAELVEELS--VFARVSP 624 (917)
T ss_pred CCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCc-eeEeehHHhhhcCHHHHHHHhhhCc--EEEEcCH
Confidence 999999999999999999999999999999999999999776433 5699999999999999999999987 9999999
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHH
Q psy6866 744 LQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKS 823 (961)
Q Consensus 744 ~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~ 823 (961)
+||.++|+.+|++|++|+|||||+||+||||+||||||||.+|+|+||++||+++.+++|..|+.++++||++|.|++|+
T Consensus 625 ~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~ 704 (917)
T COG0474 625 EQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKF 704 (917)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998899999999999999999999999999999999999999
Q ss_pred HHHHHhhhHhhHHHHHHHHHhcCC-chhHHHHHHHHHHhhhhhhHhhhcccCCCCCcccCCCCCCCcccccchhhHHHHH
Q psy6866 824 IAYILASNIPEILPFLFYIFLGIP-LPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAY 902 (961)
Q Consensus 824 i~~~l~~ni~~i~~~~~~~~~~~~-~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~~~~~~~ 902 (961)
+.|.++.|+.+++.++++.+++.+ +|++++|+||+|+++|.+|+++|+.++|+.+.|.+||+.+ ..++++++.++..+
T Consensus 705 i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p-~~~i~~~~~~~~~i 783 (917)
T COG0474 705 ILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGP-EEGLFNRKIFWRFI 783 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCc-cccccchhHHHHHH
Confidence 999999999999999999888888 9999999999999999999999999999999999999876 57889999888877
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q psy6866 903 FHLGILETLAGFLTYFHVMYD 923 (961)
Q Consensus 903 ~~~g~~~~~~~~~~~~~~~~~ 923 (961)
++.|+..+++.+++|.++...
T Consensus 784 ~~~~~~~~i~~~~~~~~~~~~ 804 (917)
T COG0474 784 LIIGLLSAILFILTFLLYLLG 804 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 777888888887777776554
No 7
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=1.6e-124 Score=1156.00 Aligned_cols=735 Identities=28% Similarity=0.441 Sum_probs=645.2
Q ss_pred CCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhcccCCC
Q psy6866 117 LIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEE 196 (961)
Q Consensus 117 ~~~~~~l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~~~~~~~~~~~ 196 (961)
..+.+++++.|++++ +|||++|+++|+++||+|+++.+++.++|+.++++|+++|.++|+++++++++.
T Consensus 51 ~~~~~~v~~~l~~~~-~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~---------- 119 (902)
T PRK10517 51 VMPEEELWKTFDTHP-EGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYAT---------- 119 (902)
T ss_pred cCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH----------
Confidence 567889999999987 699999999999999999999998889999999999999999999998888653
Q ss_pred CCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEEC------CeEEEEECCCcccceEEEecCCCe
Q psy6866 197 KPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRN------GSVKEIDSAGLVRGDIVLLKIGDK 270 (961)
Q Consensus 197 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~------G~~~~I~~~eLv~GDIV~l~~Gd~ 270 (961)
+.+..+++++++++++++++++||+|+++.+++|+++.+.+++|+|| |++++|+++||||||||.|++||+
T Consensus 120 ---~~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~ 196 (902)
T PRK10517 120 ---EDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDM 196 (902)
T ss_pred ---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCE
Confidence 23566778888889999999999999999999999999999999999 789999999999999999999999
Q ss_pred eeccEEEEeeCCceeeccCccccccceeccCCCCC---CccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhc
Q psy6866 271 VPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATN---SFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTN 347 (961)
Q Consensus 271 IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~---~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~ 347 (961)
|||||+|++|+++.||||+|||||.||.|.+++.. ....+.+|++|+||.+.+|+++++|++||.+|.+|+|.+++.
T Consensus 197 IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~ 276 (902)
T PRK10517 197 IPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVS 276 (902)
T ss_pred EeeeEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhh
Confidence 99999999998899999999999999999987632 234577899999999999999999999999999999999998
Q ss_pred cccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhccc
Q psy6866 348 RLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKN 427 (961)
Q Consensus 348 ~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ 427 (961)
....+++|+++.++++..++..++++++.+.++++.+.+.+|...+.+++++++++|||+||++++++++.++++|+|+|
T Consensus 277 ~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ 356 (902)
T PRK10517 277 EQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQK 356 (902)
T ss_pred ccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCC
Confidence 88888999999999999998888887777777776666668889999999999999999999999999999999999999
Q ss_pred ccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCC
Q psy6866 428 CIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPN 507 (961)
Q Consensus 428 ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~ 507 (961)
++||+++++|+||++|+||||||||||+|+|+|.+++... + ...++++..+++|+...
T Consensus 357 ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~------------~------~~~~~ll~~a~l~~~~~---- 414 (902)
T PRK10517 357 VIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS------------G------KTSERVLHSAWLNSHYQ---- 414 (902)
T ss_pred cEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCC------------C------CCHHHHHHHHHhcCCcC----
Confidence 9999999999999999999999999999999998763100 0 01134666666654321
Q ss_pred CCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhh
Q psy6866 508 QDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCT 587 (961)
Q Consensus 508 ~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~ 587 (961)
...+||+|.|++.++.... .......++.+.++||+|.+|+|++++...++.+.+++|||||.|+++|+
T Consensus 415 ---------~~~~~p~d~All~~a~~~~--~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~ 483 (902)
T PRK10517 415 ---------TGLKNLLDTAVLEGVDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCS 483 (902)
T ss_pred ---------CCCCCHHHHHHHHHHHhcc--hhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhch
Confidence 1257999999999876432 12234567889999999999999998877667788999999999999999
Q ss_pred cccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCC
Q psy6866 588 TMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPA 667 (961)
Q Consensus 588 ~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~ 667 (961)
+... +|...+++++.++++.+..+.++++|+||+++|++.++.++. ... ...|.|++|+|+++|+||+||+
T Consensus 484 ~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~----~~~----~~~e~~l~~lGli~~~Dp~R~~ 554 (902)
T PRK10517 484 QVRH-NGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREG----DYQ----RADESDLILEGYIAFLDPPKET 554 (902)
T ss_pred hhhc-CCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCcccc----ccc----cccccCceeeehHhhhCcchhh
Confidence 8765 667788998888889999999999999999999998754321 011 1136899999999999999999
Q ss_pred hHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHH
Q psy6866 668 VPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKL 747 (961)
Q Consensus 668 ~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~ 747 (961)
++++|++|+++||+|+|+|||++.||.++|+++||.. ..+++|.++..++++++++.+++.. ||||++|+||.
T Consensus 555 a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~-----~~v~~G~el~~l~~~el~~~~~~~~--VfAr~sPe~K~ 627 (902)
T PRK10517 555 TAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA-----GEVLIGSDIETLSDDELANLAERTT--LFARLTPMHKE 627 (902)
T ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc-----cCceeHHHHHhCCHHHHHHHHhhCc--EEEEcCHHHHH
Confidence 9999999999999999999999999999999999953 3689999999999999999998876 99999999999
Q ss_pred HHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHH
Q psy6866 748 RIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYI 827 (961)
Q Consensus 748 ~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~ 827 (961)
++|+.||++|++|+|||||+||+|||++|||||||| +|+|+||++||+||++|||.+|+.++++||++|+||+|++.|.
T Consensus 628 ~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ 706 (902)
T PRK10517 628 RIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMT 706 (902)
T ss_pred HHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HhhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCCCCCcccCCCCCCCcccccchhhHHHHHHHHHH
Q psy6866 828 LASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGI 907 (961)
Q Consensus 828 l~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~g~ 907 (961)
++.|+..++.++++.++..++|++|+|+||+|+++| +|+++|++|||++++|++|||+.. +.+...+...|+
T Consensus 707 ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d~~~~~~m~~p~r~~~-------~~~~~~~~~~g~ 778 (902)
T PRK10517 707 ASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQKPQRWNP-------ADLGRFMVFFGP 778 (902)
T ss_pred HHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCCCCChhhhcCCCCCCH-------HHHHHHHHHHHH
Confidence 999999998888777665458999999999999999 799999999999999999998421 123333455677
Q ss_pred HHHHHHHHHHHHHHhh
Q psy6866 908 LETLAGFLTYFHVMYD 923 (961)
Q Consensus 908 ~~~~~~~~~~~~~~~~ 923 (961)
+.+++.+..|+++++.
T Consensus 779 ~~~~~~~~~~~~~~~~ 794 (902)
T PRK10517 779 ISSIFDILTFCLMWWV 794 (902)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7777777666655443
No 8
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=4.8e-124 Score=1167.62 Aligned_cols=770 Identities=30% Similarity=0.460 Sum_probs=661.3
Q ss_pred CCCHHHHHHHhCCCCCCCCC--HHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhcccC
Q psy6866 117 LIPLEELYSILDTHPDRGLS--ELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETN 194 (961)
Q Consensus 117 ~~~~~~l~~~l~t~~~~GLs--~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~~~~~~~~~ 194 (961)
.++.+++++.|+|++++||| ++|+++|+++||+|++++++++++|+.++++|.+++.++|+++++++++.........
T Consensus 41 ~~~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~ 120 (941)
T TIGR01517 41 LGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEG 120 (941)
T ss_pred hCCHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccc
Confidence 57899999999999999999 9999999999999999999888999999999999999999999998876543211011
Q ss_pred CCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCeEEEEECCCcccceEEEecCCCeeec
Q psy6866 195 EEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKM-IPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPA 273 (961)
Q Consensus 195 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPa 273 (961)
.......|+.+++++++++++.++.+++++++++..+++++. .+.+++|+|||++++|+++||||||||.|++||+|||
T Consensus 121 ~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPa 200 (941)
T TIGR01517 121 KADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPA 200 (941)
T ss_pred cCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecc
Confidence 112223566777777777777888899999999988888764 4679999999999999999999999999999999999
Q ss_pred cEEEEeeCCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCC
Q psy6866 274 DIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKT 353 (961)
Q Consensus 274 D~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~ 353 (961)
||+|++|+++.||||+|||||.|+.|.+++ .|++|+||.+.+|.+.++|++||.+|.+|+|.+++...+ ++
T Consensus 201 D~~li~g~~l~VdES~LTGES~pv~K~~~~--------~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~-~~ 271 (941)
T TIGR01517 201 DGVFISGLSLEIDESSITGESDPIKKGAPK--------DSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEG-ED 271 (941)
T ss_pred cEEEEEcCcEEEEecccCCCCCcccccCCC--------CceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCC-CC
Confidence 999999978999999999999999998764 378999999999999999999999999999999887754 56
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHH---h----h---------ccHHHHHHHHHHhhhhccCchhHHHHHHHHH
Q psy6866 354 TPIEQEVQHFMRLISMWALTLGAICFLLALY---I----G---------YNWLNACVYVIGIIVANVPEGLLATLTVSLT 417 (961)
Q Consensus 354 s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~---~----~---------~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~ 417 (961)
+|+++.++++...+..++++++++.++++.+ . + .+|...+.+++++++++|||+||++++++++
T Consensus 272 t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~ 351 (941)
T TIGR01517 272 TPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALA 351 (941)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHH
Confidence 7999999999999888777666666655421 1 1 1466778889999999999999999999999
Q ss_pred HHHHHhhcccccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHH
Q psy6866 418 LTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAAC 497 (961)
Q Consensus 418 ~~~~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 497 (961)
.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|++++..+..+..+... .. .......++..++
T Consensus 352 ~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~----~~--~~~~~~~~l~~~~ 425 (941)
T TIGR01517 352 YSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVL----RN--VPKHVRNILVEGI 425 (941)
T ss_pred HHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCccc----cc--CCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998765444322110 00 1122344555555
Q ss_pred HccCceecCCCCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeC
Q psy6866 498 LCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKG 577 (961)
Q Consensus 498 ~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KG 577 (961)
.||+........ .......|||+|.|+++++...+.+....+..++.++.+||+|++|+|++++..+++++++++||
T Consensus 426 ~~~s~~~~~~~~---~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KG 502 (941)
T TIGR01517 426 SLNSSSEEVVDR---GGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKG 502 (941)
T ss_pred HhCCCCccccCC---CCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEEC
Confidence 555443221110 01235679999999999988766566556667788899999999999999998777779999999
Q ss_pred ChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEee
Q psy6866 578 APEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGL 657 (961)
Q Consensus 578 a~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~ 657 (961)
|||.|+++|+.+...+|...++++ .++++.+.+++++++|+||+++|++.++.++++. .+..|+||+|+|+
T Consensus 503 A~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~--------~~~~e~~l~~lGl 573 (941)
T TIGR01517 503 ASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEEFPR--------KDYPNGGLTLIGV 573 (941)
T ss_pred ChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCcccccc--------ccccccCcEEEEE
Confidence 999999999987655777777776 6788889999999999999999999886543221 1124789999999
Q ss_pred eeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceE
Q psy6866 658 ISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELV 737 (961)
Q Consensus 658 i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v 737 (961)
++|+||+|++++++|+.|+++||+++|+|||++.||.++|++|||..++ ..+++|.++..++++++++++.+.. |
T Consensus 574 i~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~---~~vi~G~~~~~l~~~el~~~i~~~~--V 648 (941)
T TIGR01517 574 VGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFG---GLAMEGKEFRRLVYEEMDPILPKLR--V 648 (941)
T ss_pred eeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCC---ceEeeHHHhhhCCHHHHHHHhccCe--E
Confidence 9999999999999999999999999999999999999999999998653 4699999999999999999988764 9
Q ss_pred EeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHH
Q psy6866 738 FARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIF 817 (961)
Q Consensus 738 ~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~ 817 (961)
|||++|+||.++|+.||++|++|+|||||+||+|||++||||||||++|+|+|+++||+++++|+|++|+.++++||++|
T Consensus 649 far~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~ 728 (941)
T TIGR01517 649 LARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVY 728 (941)
T ss_pred EEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCCCCCcccCCCCCCCcccccchhh
Q psy6866 818 DNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKL 897 (961)
Q Consensus 818 ~ni~~~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~~ 897 (961)
+|++++++|.+++|+..++..+++.+++.++|++++|+||+|+++|.+|+++|++|+|++++|++||+++ +++++++.+
T Consensus 729 ~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~-~~~li~~~~ 807 (941)
T TIGR01517 729 DNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGR-NAPLISRSM 807 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCC-CCCcCCHHH
Confidence 9999999999999999998888888888899999999999999999999999999999999999999864 688898887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy6866 898 VTYAYFHLGILETLAGFLTYFHV 920 (961)
Q Consensus 898 ~~~~~~~~g~~~~~~~~~~~~~~ 920 (961)
+.. ++..|+++++++++.|++.
T Consensus 808 ~~~-i~~~~~~~~~~~~~~~~~~ 829 (941)
T TIGR01517 808 WKN-ILGQAGYQLVVTFILLFAG 829 (941)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHH
Confidence 765 4556888888888777654
No 9
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=4.8e-123 Score=1151.88 Aligned_cols=760 Identities=32% Similarity=0.516 Sum_probs=667.5
Q ss_pred cccCCCHHHHHHHhCCCCCCCCC-HHHHHHHHHhcCCCccCCccccchHHHHHHHH-HhhHHHHHHHHHHHHHHHhhhhc
Q psy6866 114 DEHLIPLEELYSILDTHPDRGLS-ELEVKRRLEKDGPNSLPQKYRINNVYVLVGYI-FRGFSALLWFGALLSFLAYLLEA 191 (961)
Q Consensus 114 ~~~~~~~~~l~~~l~t~~~~GLs-~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l-~~~~~~~l~~~ails~~~~~~~~ 191 (961)
+||..+.+++++.|+|++.+||| ++|+++|+++||+|++++++++++|+.+++++ .+++.++|+++++++++.
T Consensus 3 ~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~----- 77 (884)
T TIGR01522 3 QYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFM----- 77 (884)
T ss_pred chhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHH-----
Confidence 57888999999999999999999 89999999999999999988889999999999 799999999999888654
Q ss_pred ccCCCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecCCCee
Q psy6866 192 ETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKV 271 (961)
Q Consensus 192 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~I 271 (961)
..|..++++++++++++.++++||+++++.+++++++.+.+++|+|||++++|+++||||||||.|++||+|
T Consensus 78 --------g~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~I 149 (884)
T TIGR01522 78 --------GNIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRV 149 (884)
T ss_pred --------cchhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEE
Confidence 124455666666677788999999999999999999999999999999999999999999999999999999
Q ss_pred eccEEEEeeCCceeeccCccccccceeccCCCCCC----ccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhc
Q psy6866 272 PADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNS----FAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTN 347 (961)
Q Consensus 272 PaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~----~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~ 347 (961)
||||+|++|+++.||||+|||||.|+.|.+++... ...+.+|++|+||.+.+|.++++|++||.+|.+|+|.++++
T Consensus 150 PaDg~ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~ 229 (884)
T TIGR01522 150 PADLRIVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQ 229 (884)
T ss_pred eeeEEEEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhc
Confidence 99999999988999999999999999999875321 23456799999999999999999999999999999999998
Q ss_pred cccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhccc
Q psy6866 348 RLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKN 427 (961)
Q Consensus 348 ~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ 427 (961)
.....++|+++.+++++.++++++++++++.+++.++.+.+|...+.+++++++++|||+||++++++++.+++||+++|
T Consensus 230 ~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ 309 (884)
T TIGR01522 230 AIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKR 309 (884)
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcC
Confidence 88888999999999999998877665555555555556677889999999999999999999999999999999999999
Q ss_pred ccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeee-cCc-cccc------cccc--CCchHHHHHHHHHH
Q psy6866 428 CIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHV-KNG-VDVD------IQNF--ETNTTYKTLVRAAC 497 (961)
Q Consensus 428 ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~-~~~-~~~~------~~~~--~~~~~~~~l~~~~~ 497 (961)
+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+.. +.. .... .... ..+.....++.+++
T Consensus 310 ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 389 (884)
T TIGR01522 310 AIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGN 389 (884)
T ss_pred CcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHh
Confidence 999999999999999999999999999999999999876543211 000 0000 0000 01234566888899
Q ss_pred HccCceecCCCCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEc-CCCeEEEEEe
Q psy6866 498 LCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFS-PLNKYFLLMK 576 (961)
Q Consensus 498 ~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~-~~~~~~~~~K 576 (961)
+||++.....+. ...|||+|.|+++++...+. ...+..++.++++||+|.+|+|++++.. .++++++++|
T Consensus 390 l~~~~~~~~~~~-------~~~g~p~e~All~~~~~~~~--~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~K 460 (884)
T TIGR01522 390 LCNNAKFRNEAD-------TLLGNPTDVALIELLMKFGL--DDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMK 460 (884)
T ss_pred hhCCCeecCCCC-------CcCCChHHHHHHHHHHHcCc--HhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEe
Confidence 999876543322 23589999999999875432 2344567889999999999999988765 3567899999
Q ss_pred CChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEe
Q psy6866 577 GAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIG 656 (961)
Q Consensus 577 Ga~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG 656 (961)
||||.|+..|+.+...+|...+++++.++++.+.++.++.+|+|++++|++.+ +.+|+|+|
T Consensus 461 Gape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~-------------------~~~l~~lG 521 (884)
T TIGR01522 461 GAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE-------------------KGQLTFLG 521 (884)
T ss_pred CChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC-------------------CCCeEEEE
Confidence 99999999999887766778888988889999999999999999999998754 25689999
Q ss_pred eeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCce
Q psy6866 657 LISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKEL 736 (961)
Q Consensus 657 ~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~ 736 (961)
+++|+||+||+++++|+.|+++|++++|+|||+..||.++|+++||.... ..+++|.++..++++++++++.+..
T Consensus 522 li~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~---~~~v~g~~l~~~~~~~l~~~~~~~~-- 596 (884)
T TIGR01522 522 LVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKT---SQSVSGEKLDAMDDQQLSQIVPKVA-- 596 (884)
T ss_pred EEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC---CceeEhHHhHhCCHHHHHHHhhcCe--
Confidence 99999999999999999999999999999999999999999999997653 3578999999999999999988764
Q ss_pred EEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHH
Q psy6866 737 VFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLI 816 (961)
Q Consensus 737 v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~ 816 (961)
||||++|+||.++|+.+|+.|++|+|||||.||+|||++||||||||.+|+++++++||+++++|||+.|+.++++||++
T Consensus 597 Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~ 676 (884)
T TIGR01522 597 VFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGI 676 (884)
T ss_pred EEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999779999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCCCCCcccCCCCCCCcccccchh
Q psy6866 817 FDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRK 896 (961)
Q Consensus 817 ~~ni~~~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~ 896 (961)
|+|+++++.|.++.|+..++.++++.+++.++|++++|+||+|+++|.+|+++|++|||++++|+|||+++ +++++++.
T Consensus 677 ~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~-~~~~~~~~ 755 (884)
T TIGR01522 677 FNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPR-NDKILTKD 755 (884)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCC-CCCccCHH
Confidence 99999999999999999998888888999999999999999999999999999999999999999999865 78999998
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6866 897 LVTYAYFHLGILETLAGFLTYFHVM 921 (961)
Q Consensus 897 ~~~~~~~~~g~~~~~~~~~~~~~~~ 921 (961)
++..+ ...|++++++.++.|++.+
T Consensus 756 ~~~~~-~~~g~~~~~~~~~~~~~~~ 779 (884)
T TIGR01522 756 LIKKI-LVSAIIIVVGTLFVFVREM 779 (884)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 87764 4568888877777776654
No 10
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=8.3e-123 Score=1142.80 Aligned_cols=743 Identities=27% Similarity=0.422 Sum_probs=638.1
Q ss_pred cCCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhcccCC
Q psy6866 116 HLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNE 195 (961)
Q Consensus 116 ~~~~~~~l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~~~~~~~~~~ 195 (961)
|..+.+++++.|++++ +|||++|+++|+++||+|+++.+++.++|+.|+++|.+++.++|+++++++++...+.....
T Consensus 28 ~~~~~~~v~~~l~~~~-~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~- 105 (903)
T PRK15122 28 AANSLEETLANLNTHR-QGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRR- 105 (903)
T ss_pred HhCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccC-
Confidence 4578899999999995 89999999999999999999998888999999999999999999999999887532211100
Q ss_pred CCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECC------eEEEEECCCcccceEEEecCCC
Q psy6866 196 EKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNG------SVKEIDSAGLVRGDIVLLKIGD 269 (961)
Q Consensus 196 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G------~~~~I~~~eLv~GDIV~l~~Gd 269 (961)
+....|..+++++++++++++++++||+++++..++|+++.+.+++|+||| ++++|+++||||||+|.|++||
T Consensus 106 -~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd 184 (903)
T PRK15122 106 -GEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGD 184 (903)
T ss_pred -CccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCC
Confidence 111245667788888889999999999999999999999999999999994 7999999999999999999999
Q ss_pred eeeccEEEEeeCCceeeccCccccccceeccCCC-------------CCCccccCcceEeeeeeeeeeceEEEEEEcCCc
Q psy6866 270 KVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGA-------------TNSFAVESRNLVFFSTNLVSGSGKGVVILTGSN 336 (961)
Q Consensus 270 ~IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~-------------~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~ 336 (961)
+|||||+|++|+++.||||+|||||.||.|.+.. ......+.+|++|+||.+.+|+++++|++||.+
T Consensus 185 ~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~ 264 (903)
T PRK15122 185 MIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSR 264 (903)
T ss_pred EEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccc
Confidence 9999999999998999999999999999998620 111233567999999999999999999999999
Q ss_pred ChhhhHHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHH
Q psy6866 337 TVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSL 416 (961)
Q Consensus 337 T~~g~i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l 416 (961)
|.+|+|.+++.. ...++|+++.++++...+..+++.++.+.+++..+.+.+|...+.+++++++++|||+||+++++++
T Consensus 265 T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~L 343 (903)
T PRK15122 265 TYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNL 343 (903)
T ss_pred cHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 999999998877 5667899999999998887777666666665555556688899999999999999999999999999
Q ss_pred HHHHHHhhcccccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHH
Q psy6866 417 TLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAA 496 (961)
Q Consensus 417 ~~~~~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 496 (961)
+.++.+|+|+|++||+++++|+||++|+||||||||||+|+|+|.+++..+.. ..+.++..+
T Consensus 344 a~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~------------------~~~~~l~~a 405 (903)
T PRK15122 344 AKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR------------------KDERVLQLA 405 (903)
T ss_pred HHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC------------------ChHHHHHHH
Confidence 99999999999999999999999999999999999999999999987632110 012355555
Q ss_pred HHccCceecCCCCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEe
Q psy6866 497 CLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMK 576 (961)
Q Consensus 497 ~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~K 576 (961)
++|+.. ....++|+|.|+++++...+.. ..+..++.+.++||+|.+|+|++++...++++++++|
T Consensus 406 ~l~s~~-------------~~~~~~p~e~All~~a~~~~~~--~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~K 470 (903)
T PRK15122 406 WLNSFH-------------QSGMKNLMDQAVVAFAEGNPEI--VKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICK 470 (903)
T ss_pred HHhCCC-------------CCCCCChHHHHHHHHHHHcCch--hhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEEC
Confidence 554211 0125799999999998764321 2334678899999999999999998776678899999
Q ss_pred CChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEe
Q psy6866 577 GAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIG 656 (961)
Q Consensus 577 Ga~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG 656 (961)
||||.|+++|++... +|...+++++.++++.+..+.++.+|+|++++|++.++.++... ...+..|+|++|+|
T Consensus 471 Ga~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~------~~~~~~e~~l~~lG 543 (903)
T PRK15122 471 GAVEEMLAVATHVRD-GDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRA------QYSTADERDLVIRG 543 (903)
T ss_pred CcHHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCcccccc------ccccccccCcEEEE
Confidence 999999999997654 67777889888999999999999999999999999876432110 01112478999999
Q ss_pred eeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCce
Q psy6866 657 LISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKEL 736 (961)
Q Consensus 657 ~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~ 736 (961)
+++|+||+||+++++|++|+++||+|+|+|||++.||.++|+++||.. ..+++|.++..++++++.+.+++..
T Consensus 544 li~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~-----~~vi~G~el~~~~~~el~~~v~~~~-- 616 (903)
T PRK15122 544 FLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP-----GEPLLGTEIEAMDDAALAREVEERT-- 616 (903)
T ss_pred EEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC-----CCccchHhhhhCCHHHHHHHhhhCC--
Confidence 999999999999999999999999999999999999999999999953 3589999999999999999998876
Q ss_pred EEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHH
Q psy6866 737 VFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLI 816 (961)
Q Consensus 737 v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~ 816 (961)
||||++|+||.++|+.||++|++|+|||||+||+|||++|||||||| +|+|+||++||+||++|||++|+.++++||++
T Consensus 617 VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i 695 (903)
T PRK15122 617 VFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKGRET 695 (903)
T ss_pred EEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCCCCCcccCCCCCCCcccccchh
Q psy6866 817 FDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRK 896 (961)
Q Consensus 817 ~~ni~~~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~ 896 (961)
|+||+|++.|.++.|+..++.+++..+++.++|++|+|+||+|+++|. |+++|++|||++++| |||+++ +.+++++.
T Consensus 696 ~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal~~d~~~~~~m-~~P~~~-~~~~~~~~ 772 (903)
T PRK15122 696 FGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSLPWDKMDKEFL-RKPRKW-DAKNIGRF 772 (903)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhhcCCCCCHhhc-CCCCCC-ChhhhHHH
Confidence 999999999999999999888777777766689999999999999995 999999999999999 999875 56777764
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH
Q psy6866 897 LVTYAYFHLGILETLAGFLTYF 918 (961)
Q Consensus 897 ~~~~~~~~~g~~~~~~~~~~~~ 918 (961)
++. +|.+.+++++..|+
T Consensus 773 ~~~-----~g~~~~~~~~~~~~ 789 (903)
T PRK15122 773 MLW-----IGPTSSIFDITTFA 789 (903)
T ss_pred HHH-----HHHHHHHHHHHHHH
Confidence 432 35554444444443
No 11
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=2.3e-122 Score=1138.40 Aligned_cols=732 Identities=28% Similarity=0.446 Sum_probs=639.5
Q ss_pred cCCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhcccCC
Q psy6866 116 HLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNE 195 (961)
Q Consensus 116 ~~~~~~~l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~~~~~~~~~~ 195 (961)
|..+.+++.+.|+++. +|||++|+++|+++||+|.++.+++.++|+.++++|++++.++|+++++++++.
T Consensus 16 ~~~~~~~~~~~l~~~~-~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~--------- 85 (867)
T TIGR01524 16 SQMGKETLLRKLGVHE-TGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLT--------- 85 (867)
T ss_pred HhCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHH---------
Confidence 4678899999999986 799999999999999999999988888999999999999999999999888654
Q ss_pred CCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEE------CCeEEEEECCCcccceEEEecCCC
Q psy6866 196 EKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIR------NGSVKEIDSAGLVRGDIVLLKIGD 269 (961)
Q Consensus 196 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R------~G~~~~I~~~eLv~GDIV~l~~Gd 269 (961)
+.++.+++++++++++++++++||+++++..++++++.+.+++|+| ||++++|+++||||||||.|++||
T Consensus 86 ----~~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd 161 (867)
T TIGR01524 86 ----DDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGD 161 (867)
T ss_pred ----hhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCC
Confidence 2456677888888899999999999999999999999999999999 999999999999999999999999
Q ss_pred eeeccEEEEeeCCceeeccCccccccceeccCCCC---CCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhh
Q psy6866 270 KVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGAT---NSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLT 346 (961)
Q Consensus 270 ~IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~---~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~ 346 (961)
+|||||+|++|+++.||||+|||||.|+.|.+++. .....+.+|++|+||.+.+|.++++|++||.+|.+|+|.+++
T Consensus 162 ~VPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v 241 (867)
T TIGR01524 162 IIPADARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAA 241 (867)
T ss_pred EEcccEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHh
Confidence 99999999999889999999999999999998763 223446789999999999999999999999999999999998
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcc
Q psy6866 347 NRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASK 426 (961)
Q Consensus 347 ~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~ 426 (961)
.. ...++|+++.++++..++..++++++++.++++.+.+.+|...+.+++++++++|||+||++++++++.++++|+|+
T Consensus 242 ~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~ 320 (867)
T TIGR01524 242 TE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKK 320 (867)
T ss_pred hC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhC
Confidence 87 66789999999999999988888877777777665566788899999999999999999999999999999999999
Q ss_pred cccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecC
Q psy6866 427 NCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEP 506 (961)
Q Consensus 427 ~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~ 506 (961)
|++||+++++|+||++|+||||||||||+|+|+|.+++.... ...+.++..+++|+...
T Consensus 321 ~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~------------------~~~~~~l~~a~l~~~~~--- 379 (867)
T TIGR01524 321 KVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSG------------------ETSERVLKMAWLNSYFQ--- 379 (867)
T ss_pred CcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCC------------------CCHHHHHHHHHHhCCCC---
Confidence 999999999999999999999999999999999988742110 01133555565553221
Q ss_pred CCCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHh
Q psy6866 507 NQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERC 586 (961)
Q Consensus 507 ~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c 586 (961)
...++|+|.|++.++... .....+..++.+.++||+|.+|+|++++...++.+++++|||||.|+++|
T Consensus 380 ----------~~~~~p~~~Al~~~~~~~--~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c 447 (867)
T TIGR01524 380 ----------TGWKNVLDHAVLAKLDES--AARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVC 447 (867)
T ss_pred ----------CCCCChHHHHHHHHHHhh--chhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhc
Confidence 124689999999987642 12233456788999999999999999887666668899999999999999
Q ss_pred hcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCC
Q psy6866 587 TTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRP 666 (961)
Q Consensus 587 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~ 666 (961)
+++.. +|...+++++.++++.+.++.++.+|+|++++|+++++.++. ... +..|+||+|+|+++|+||+|+
T Consensus 448 ~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~----~~~----~~~e~~l~~lGli~l~Dp~R~ 518 (867)
T TIGR01524 448 THKRF-GGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEA----DFT----KTDEEQLIIEGFLGFLDPPKE 518 (867)
T ss_pred hhhhc-CCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccc----ccc----ccccCCcEEEEEEEeeCCCch
Confidence 97755 677778888888889999999999999999999998765321 011 113689999999999999999
Q ss_pred ChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHH
Q psy6866 667 AVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQK 746 (961)
Q Consensus 667 ~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K 746 (961)
+++++|++|+++||+++|+|||+..||.++|+++||.. ..+++|.++..++++++.+.+++.. +|||++|+||
T Consensus 519 ~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~-----~~v~~g~~l~~~~~~el~~~~~~~~--vfAr~~Pe~K 591 (867)
T TIGR01524 519 STKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA-----NDFLLGADIEELSDEELARELRKYH--IFARLTPMQK 591 (867)
T ss_pred hHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC-----CCeeecHhhhhCCHHHHHHHhhhCe--EEEECCHHHH
Confidence 99999999999999999999999999999999999964 3589999999999999999998875 9999999999
Q ss_pred HHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHH
Q psy6866 747 LRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAY 826 (961)
Q Consensus 747 ~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~ 826 (961)
.++|+.+|++|++|+|||||.||+|||++|||||||| +|+|+||++||+||++|||++|+.++++||++|+||+|++.|
T Consensus 592 ~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~ 670 (867)
T TIGR01524 592 SRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKM 670 (867)
T ss_pred HHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHhhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCCCCCcccCCCCCCCcccccchhhHHHHHHHHH
Q psy6866 827 ILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLG 906 (961)
Q Consensus 827 ~l~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~g 906 (961)
.++.|+..++.++++.++..++|++|+|+||+|+++| +|+++|++|||++++|++||++ +.+ .+...++.+|
T Consensus 671 ~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~~~~~~~~~m~~p~~~--~~~-----~~~~~~~~~g 742 (867)
T TIGR01524 671 TASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKKPHQW--EQK-----GMGRFMLCIG 742 (867)
T ss_pred HHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhcCCCCChHhhCCCCCC--Chh-----hHHHHHHHHH
Confidence 9999999998888777776668999999999999999 7999999999999999877763 232 2222344467
Q ss_pred HHHHHHHHHHHHHH
Q psy6866 907 ILETLAGFLTYFHV 920 (961)
Q Consensus 907 ~~~~~~~~~~~~~~ 920 (961)
++.+++.+.+|++.
T Consensus 743 ~~~~~~~~~~~~~~ 756 (867)
T TIGR01524 743 PVSSIFDIATFLLM 756 (867)
T ss_pred HHHHHHHHHHHHHH
Confidence 77666666555443
No 12
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=2.1e-116 Score=1094.52 Aligned_cols=749 Identities=33% Similarity=0.504 Sum_probs=632.5
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHhhhhcccCCCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEE
Q psy6866 165 VGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVI 244 (961)
Q Consensus 165 ~~~l~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~ 244 (961)
+++|.+++.++|+++++++++...... +......|+.+++++++++++++++++|++++++.+++++++.+.+++|+
T Consensus 2 ~~~f~~~~~~iL~~aa~ls~~~~~~~~---~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~Vi 78 (917)
T TIGR01116 2 LEQFEDLLVRILLLAACVSFVLAWFEE---GEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVL 78 (917)
T ss_pred hHHHhCHHHHHHHHHHHHHHHHhcccc---cccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEE
Confidence 578889999999999999987643321 11112456778888889999999999999999999999999999999999
Q ss_pred ECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCCceeeccCccccccceeccCCCCC---CccccCcceEeeeeee
Q psy6866 245 RNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATN---SFAVESRNLVFFSTNL 321 (961)
Q Consensus 245 R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~---~~~~~~~n~l~~Gt~v 321 (961)
|||++++|+++||||||||.|++||+|||||+|++|+++.||||+|||||.|+.|.++... ..+.+.+|++|+||.+
T Consensus 79 Rdg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v 158 (917)
T TIGR01116 79 RDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLV 158 (917)
T ss_pred ECCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEE
Confidence 9999999999999999999999999999999999998899999999999999999876332 1234567999999999
Q ss_pred eeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------hccH----HH
Q psy6866 322 VSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYI------GYNW----LN 391 (961)
Q Consensus 322 ~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~------~~~~----~~ 391 (961)
.+|++.++|++||.+|.+|+|.+++...+.+++|+++.+++++..++.++++++++.++++... +.+| ..
T Consensus 159 ~~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 238 (917)
T TIGR01116 159 VAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIY 238 (917)
T ss_pred ecceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHH
Confidence 9999999999999999999999998888888999999999999988887777766666554321 1223 23
Q ss_pred HHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceee-
Q psy6866 392 ACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIY- 470 (961)
Q Consensus 392 ~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~- 470 (961)
.+..++++++++|||+||+++++++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..+
T Consensus 239 ~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~ 318 (917)
T TIGR01116 239 YFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSS 318 (917)
T ss_pred HHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccc
Confidence 4446678999999999999999999999999999999999999999999999999999999999999999998765321
Q ss_pred -----eecCc-cccccccc--------CCchHHHHHHHHHHHccCceecCCCCCcccccccccCChhHHHHHHhhccccc
Q psy6866 471 -----HVKNG-VDVDIQNF--------ETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIK 536 (961)
Q Consensus 471 -----~~~~~-~~~~~~~~--------~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~ 536 (961)
..... ........ ........++.++++||++.+..++... .....|||+|.|+++++.+.+.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~---~~~~~gdp~E~ALl~~~~~~g~ 395 (917)
T TIGR01116 319 SLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKG---VYEKVGEATEAALKVLVEKMGL 395 (917)
T ss_pred ccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCC---ceeeccChhHHHHHHHHHHcCC
Confidence 11110 00000000 0123356688899999988764332211 1234699999999999876543
Q ss_pred chh----------------hHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhhcccccCCcccccC
Q psy6866 537 SIQ----------------DVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLT 600 (961)
Q Consensus 537 ~~~----------------~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~ 600 (961)
+.. ..++.++.++++||+|+||+|+++++.. +++++|+|||||.|+++|+++...+|...+++
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~-~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~ 474 (917)
T TIGR01116 396 PATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS-TGNKLFVKGAPEGVLERCTHILNGDGRAVPLT 474 (917)
T ss_pred CchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeC-CcEEEEEcCChHHHHHhccceecCCCCeeeCC
Confidence 322 2345678999999999999999998753 66899999999999999998877668888999
Q ss_pred HHHHHHHHHHHHHHHH-hcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcC
Q psy6866 601 AEKKYELEDKIKLFAS-KGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAG 679 (961)
Q Consensus 601 ~~~~~~~~~~~~~~a~-~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~ag 679 (961)
++.++++.+.+++|++ +|+||+++|||.++.+.... ...+....+.+|+||+|+|+++++||+|++++++|+.|+++|
T Consensus 475 ~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~-~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aG 553 (917)
T TIGR01116 475 DKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREED-LLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAG 553 (917)
T ss_pred HHHHHHHHHHHHHHHhhcCCeEEEEEEEECCcccccc-ccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCC
Confidence 9999999999999999 99999999999986532110 001112224568999999999999999999999999999999
Q ss_pred CEEEEEcCCCHHHHHHHHHHcCCCCCCCC-CceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCC
Q psy6866 680 IRVIMVTGDHPCTAKAIAIKCHILSETSS-DDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDE 758 (961)
Q Consensus 680 i~v~m~TGD~~~ta~~ia~~~gi~~~~~~-~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~ 758 (961)
|+++|+|||+..||.++|+++|+..++.. ....++|.++..+++++......+. .||||++|+||.++|+.+|+.|+
T Consensus 554 I~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~--~v~ar~~P~~K~~iV~~lq~~g~ 631 (917)
T TIGR01116 554 IRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSA--VLFSRVEPSHKSELVELLQEQGE 631 (917)
T ss_pred CEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcC--eEEEecCHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999865432 2357899999999988887776654 59999999999999999999999
Q ss_pred EEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHH
Q psy6866 759 IVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPF 838 (961)
Q Consensus 759 ~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~ 838 (961)
+|+|+|||.||+|||++|||||||| +|++.++++||+++.+|||..|++++++||++|+|++++++|.++.|+..+++.
T Consensus 632 ~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~ 710 (917)
T TIGR01116 632 IVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCI 710 (917)
T ss_pred eEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 9999999999999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCCCCCcccCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHH
Q psy6866 839 LFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYF 918 (961)
Q Consensus 839 ~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 918 (961)
+++.+++.+.|++++|++|+|+++|.+|+++|++++|++++|++||+++ ++++++++++.. ++..|+++++++++.|+
T Consensus 711 ~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~-~~~l~~~~~~~~-~~~~g~~~~~~~~~~~~ 788 (917)
T TIGR01116 711 FLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRP-DEPLITGWLFFR-YLVVGVYVGLATVGGFV 788 (917)
T ss_pred HHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCC-CCCcccHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 9998999999999999999999999999999999999999999999865 689999988765 55579999999888887
Q ss_pred HHHhhcCC
Q psy6866 919 HVMYDAGW 926 (961)
Q Consensus 919 ~~~~~~~~ 926 (961)
+.+...|+
T Consensus 789 ~~~~~~~~ 796 (917)
T TIGR01116 789 WWYLLTHF 796 (917)
T ss_pred HHHhhcCc
Confidence 76554344
No 13
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=3e-114 Score=1053.61 Aligned_cols=685 Identities=30% Similarity=0.487 Sum_probs=594.9
Q ss_pred CCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhcccCCCCCCchhhHHHHHHHHHh
Q psy6866 134 GLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCI 213 (961)
Q Consensus 134 GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 213 (961)
|||++|+++|+++||+|+++++ +++.|+.|+++|++++.++|+++++++++. ..|..+++++++++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~-~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~-------------~~~~~~~~i~~~~~ 66 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEK-KVSPLLKFLGFFWNPLSWVMEAAAIIAIAL-------------ENWVDFVIILGLLL 66 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCC-CCCHHHHHHHHHhchHHHHHHHHHHHHHhh-------------cchhhhhhhhhhhH
Confidence 8999999999999999999884 457789999999999999999999888654 23455677778888
Q ss_pred hHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCCceeeccCcccc
Q psy6866 214 VTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGE 293 (961)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~l~vdeS~LTGE 293 (961)
+++.++++||+++++..++++++.+++++|+|||++++|+++||||||||.|++||+|||||+|++|+++.||||+||||
T Consensus 67 i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGE 146 (755)
T TIGR01647 67 LNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGE 146 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999998889999999999
Q ss_pred ccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHHHHHHHHHHHHHH
Q psy6866 294 VEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALT 373 (961)
Q Consensus 294 s~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~ 373 (961)
|.||.|.+++ .+|+||.+.+|+++++|++||.+|.+|+|.++++..+..++|+|+.+++++.++++++++
T Consensus 147 S~PV~K~~~~----------~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~ 216 (755)
T TIGR01647 147 SLPVTKKTGD----------IAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGV 216 (755)
T ss_pred ccceEeccCC----------eeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 9999998774 499999999999999999999999999999999888888899999999999999888888
Q ss_pred HHHHHHHHHHH-hhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccceeEEEecCcCc
Q psy6866 374 LGAICFLLALY-IGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGT 452 (961)
Q Consensus 374 ~~~i~~i~~~~-~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGT 452 (961)
++++.+++++. .+.+|...+.+++++++++|||+||++++++++.++++|+|+|+++|+++++|+||++|++|||||||
T Consensus 217 ~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGT 296 (755)
T TIGR01647 217 LVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGT 296 (755)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCc
Confidence 88777777766 56788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCcccccccccCChhHHHHHHhhc
Q psy6866 453 LTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQ 532 (961)
Q Consensus 453 LT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~ 532 (961)
||+|+|+|.+++..+.. + ..++++..+++|+. ...++|.|.|+++++.
T Consensus 297 LT~~~~~v~~~~~~~~~-------------~----~~~~~l~~a~~~~~---------------~~~~~pi~~Ai~~~~~ 344 (755)
T TIGR01647 297 LTLNKLSIDEILPFFNG-------------F----DKDDVLLYAALASR---------------EEDQDAIDTAVLGSAK 344 (755)
T ss_pred cccCceEEEEEEecCCC-------------C----CHHHHHHHHHHhCC---------------CCCCChHHHHHHHHHH
Confidence 99999999998754210 0 11236666776642 1246899999999876
Q ss_pred ccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCC-CeEEEEEeCChHHHHHHhhcccccCCcccccCHHHHHHHHHHH
Q psy6866 533 PRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPL-NKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKI 611 (961)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~-~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~ 611 (961)
..+ ..+..++.+..+||++.+|+|++++..++ +++++++||+||.|++.|+.. .+.++++.+.+
T Consensus 345 ~~~----~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~~~~~~~~ 409 (755)
T TIGR01647 345 DLK----EARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-----------KEIEEKVEEKV 409 (755)
T ss_pred HhH----HHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-----------HHHHHHHHHHH
Confidence 421 23455778899999999999988877653 677889999999999999731 23456677888
Q ss_pred HHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHH
Q psy6866 612 KLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPC 691 (961)
Q Consensus 612 ~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ 691 (961)
++++.+|+|++++|++. .|.+|+|+|+++|+||+||+++++|++|+++||+++|+|||++.
T Consensus 410 ~~~~~~G~rvl~vA~~~-------------------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~ 470 (755)
T TIGR01647 410 DELASRGYRALGVARTD-------------------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLA 470 (755)
T ss_pred HHHHhCCCEEEEEEEEc-------------------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHH
Confidence 99999999999999862 14678999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHh
Q psy6866 692 TAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAP 771 (961)
Q Consensus 692 ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~ 771 (961)
||.++|+++||.........+.+|.+...++++++++++++.. +|||++|+||.++|+.+|++|++|+|||||.||+|
T Consensus 471 tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDap 548 (755)
T TIGR01647 471 IAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDAD--GFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAP 548 (755)
T ss_pred HHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCC--EEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHH
Confidence 9999999999965322223345566666788999999998876 99999999999999999999999999999999999
Q ss_pred hhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHhcCCchhH
Q psy6866 772 ALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVS 851 (961)
Q Consensus 772 al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~~~~~~~~~~~pl~ 851 (961)
||++|||||||| +|+|+||++||+||++|||.+|+.++++||++|+|++|++.|.++.|+..++.+++..++ .+.|++
T Consensus 549 AL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~-~~~~l~ 626 (755)
T TIGR01647 549 ALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILI-LNFYFP 626 (755)
T ss_pred HHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH-hCcchh
Confidence 999999999999 899999999999999999999999999999999999999999999999988766655432 335699
Q ss_pred HHHHHHHHHhhhhhhHhhhcccCCCCCcccCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy6866 852 TVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYFHVMY 922 (961)
Q Consensus 852 ~~q~l~i~li~d~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 922 (961)
|+|+||+|+++|. |++++++|++++. |+|+. .. + ++++.. ....|++.++.+|+.|++.+.
T Consensus 627 ~~~il~~~l~~d~-~~~~l~~~~~~~~---~~p~~---~~-~-~~~~~~-~~~~g~~~~~~~~~~~~~~~~ 687 (755)
T TIGR01647 627 PIMVVIIAILNDG-TIMTIAYDNVKPS---KLPQR---WN-L-REVFTM-STVLGIYLVISTFLLLAIALD 687 (755)
T ss_pred HHHHHHHHHHHhH-hHhhccCCCCCCC---CCCCc---cc-h-HHHHHH-HHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999996 7999999998753 44432 22 2 344444 345799999988888887764
No 14
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=2.2e-114 Score=1089.99 Aligned_cols=780 Identities=22% Similarity=0.275 Sum_probs=629.0
Q ss_pred cccHHHHHHHhhhhcccc-HHHHHhhccccCccccCCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchH
Q psy6866 83 DCSKKSILRFIHKEKEMD-VAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNV 161 (961)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~ 161 (961)
+++.++..+|+|.+.+.. +..+....+. .+........ ....|||.+|+++|++.||+|.++.+. +++|
T Consensus 96 ~~f~~~~~~y~~~~~~~~~f~~~~~~~~~-------~~~~~~~~~~--~~~~GLs~~e~~~r~~~yG~N~i~~~~-~s~~ 165 (1054)
T TIGR01657 96 IYFDFRKQRFSYHEKELKIFSPLPYLFKE-------KSFGVYSTCA--GHSNGLTTGDIAQRKAKYGKNEIEIPV-PSFL 165 (1054)
T ss_pred EEEEEEEEEEEEECCCCceEEeccccccc-------ccchhhhhhh--hhccCCCHHHHHHHHHhcCCCeeecCC-CCHH
Confidence 345566778888776653 4444332111 0000111111 124799999999999999999999865 7999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhhhhcccCCCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCee
Q psy6866 162 YVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRA 241 (961)
Q Consensus 162 ~~~~~~l~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ 241 (961)
+.++++++++|.++++++.+++++. ++|+++++++++++++.+..+++++++.+.++++.. .+..+
T Consensus 166 ~ll~~~~~~p~~i~~i~~~~l~~~~-------------~~~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~~~-~~~~v 231 (1054)
T TIGR01657 166 ELLKEEVLHPFYVFQVFSVILWLLD-------------EYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVH-KPQSV 231 (1054)
T ss_pred HHHHHHHhchHHHHHHHHHHHHHhh-------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeeE
Confidence 9999999999998888876555431 457788888888888999999999998888777654 36789
Q ss_pred EEEECCeEEEEECCCcccceEEEec--CCCeeeccEEEEeeCCceeeccCccccccceeccCCCC---CC-----ccccC
Q psy6866 242 TVIRNGSVKEIDSAGLVRGDIVLLK--IGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGAT---NS-----FAVES 311 (961)
Q Consensus 242 ~V~R~G~~~~I~~~eLv~GDIV~l~--~Gd~IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~---~~-----~~~~~ 311 (961)
+|+|||++++|+++||||||||.|+ +|++|||||+|++|+ +.||||+|||||.|+.|.+... .. ...++
T Consensus 232 ~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~ 310 (1054)
T TIGR01657 232 IVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSK 310 (1054)
T ss_pred EEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEecccccCCccceecccCCcccccccccccccccc
Confidence 9999999999999999999999999 999999999999985 7999999999999999987532 11 12356
Q ss_pred cceEeeeeeeee-------eceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6866 312 RNLVFFSTNLVS-------GSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALY 384 (961)
Q Consensus 312 ~n~l~~Gt~v~~-------G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~ 384 (961)
+|++|+||.+++ |.+.++|++||.+|..|++.+.+....+..+++++.+.++...++.++++.+++.++....
T Consensus 311 ~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~~~ 390 (1054)
T TIGR01657 311 KHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIK 390 (1054)
T ss_pred ceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999995 7899999999999999999998888888889999999999888777666544444444444
Q ss_pred hhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccceeEEEecCcCccccCceEEEEEE
Q psy6866 385 IGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLS 464 (961)
Q Consensus 385 ~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~ 464 (961)
.+.+|...+..++++++++|||+||++++++++++++||+|+|++||++.++|++|++|++|||||||||+|+|+|.+++
T Consensus 391 ~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~ 470 (1054)
T TIGR01657 391 DGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQ 470 (1054)
T ss_pred cCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEe
Confidence 56688899999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCcccccccccCChhHHHHHHhhcccccchhh----
Q psy6866 465 FNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQD---- 540 (961)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~---- 540 (961)
..+........ .. . ........+..++++||++....+ ...|||+|.|+++++.........
T Consensus 471 ~~~~~~~~~~~--~~--~-~~~~~~~~~~~~~a~C~~~~~~~~---------~~~Gdp~E~al~~~~~~~~~~~~~~~~~ 536 (1054)
T TIGR01657 471 GLSGNQEFLKI--VT--E-DSSLKPSITHKALATCHSLTKLEG---------KLVGDPLDKKMFEATGWTLEEDDESAEP 536 (1054)
T ss_pred cccCccccccc--cc--c-ccccCchHHHHHHHhCCeeEEECC---------EEecCHHHHHHHHhCCCEEECCCCcccc
Confidence 64321100000 00 0 000122346678899998754321 357999999999987533211000
Q ss_pred H-----------hhcCCeEEEecCCCCCeeEEEEEEcCC-CeEEEEEeCChHHHHHHhhcccccCCcccccCHHHHHHHH
Q psy6866 541 V-----------RNTFPKVTEVPFNSLNKFHLTVHFSPL-NKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELE 608 (961)
Q Consensus 541 ~-----------~~~~~~~~~~~F~s~~k~~~~v~~~~~-~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~ 608 (961)
. ...+++++++||+|++|||+++++..+ +++++++|||||.|+++|++. ..++++.
T Consensus 537 ~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~------------~~p~~~~ 604 (1054)
T TIGR01657 537 TSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE------------TVPSDYQ 604 (1054)
T ss_pred cccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc------------CCChhHH
Confidence 0 135677899999999999999988744 568899999999999999841 1245677
Q ss_pred HHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCC
Q psy6866 609 DKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGD 688 (961)
Q Consensus 609 ~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD 688 (961)
+.++.|+.+|+||+|+|||+++...+.... ...++.+|+||+|+|+++|+||+||+++++|+.|+++||+++|+|||
T Consensus 605 ~~~~~~a~~G~RVLalA~k~l~~~~~~~~~---~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD 681 (1054)
T TIGR01657 605 EVLKSYTREGYRVLALAYKELPKLTLQKAQ---DLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGD 681 (1054)
T ss_pred HHHHHHHhcCCEEEEEEEeecCccchhhhh---hccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCC
Confidence 889999999999999999998743221111 11234578999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHcCCCCCCCC--------------------------------------------------CceeEechhh
Q psy6866 689 HPCTAKAIAIKCHILSETSS--------------------------------------------------DDNVFTGTDL 718 (961)
Q Consensus 689 ~~~ta~~ia~~~gi~~~~~~--------------------------------------------------~~~v~~g~~~ 718 (961)
++.||.++|++|||+.+... ...+++|+++
T Consensus 682 ~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l 761 (1054)
T TIGR01657 682 NPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAF 761 (1054)
T ss_pred CHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHH
Confidence 99999999999999764310 0257888887
Q ss_pred cc---CCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccc
Q psy6866 719 RK---ITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTAD 795 (961)
Q Consensus 719 ~~---~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad 795 (961)
.. +.++++.+++.+.. ||||++|+||.++|+.||+.|++|+|||||+||+||||+|||||||| . +|+ ..+||
T Consensus 762 ~~l~~~~~~~l~~~~~~~~--VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~-~-~da-s~AA~ 836 (1054)
T TIGR01657 762 AVLQAHSPELLLRLLSHTT--VFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLS-E-AEA-SVAAP 836 (1054)
T ss_pred HHHHHhhHHHHHHHHhcCe--EEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeec-c-ccc-eeecc
Confidence 65 45567888888765 99999999999999999999999999999999999999999999998 3 344 48999
Q ss_pred eEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCC
Q psy6866 796 MILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKP 875 (961)
Q Consensus 796 ~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~ 875 (961)
+++.+++|++|+.+|++||+++.|+++.++|.+.+++...+..+...+ .+.|++++|+||+|++++++++++|++++|
T Consensus 837 f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p 914 (1054)
T TIGR01657 837 FTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSILYL--IGSNLGDGQFLTIDLLLIFPVALLMSRNKP 914 (1054)
T ss_pred cccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--ccCcCccHHHHHHHHHHHHHHHHHHHcCCc
Confidence 999999999999999999999999999999999999888665443333 458899999999999999999999999999
Q ss_pred CCCcccCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q psy6866 876 ESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYFHVMYDAGWDP 928 (961)
Q Consensus 876 ~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 928 (961)
++++|++||. ++++++.++...++ .++++.++.+..|++.....|+.+
T Consensus 915 ~~~l~~~~P~----~~l~~~~~~~si~~-q~~i~~~~~~~~~~~~~~~~~~~~ 962 (1054)
T TIGR01657 915 LKKLSKERPP----SNLFSVYILTSVLI-QFVLHILSQVYLVFELHAQPWYKP 962 (1054)
T ss_pred hhhcCCCCCC----ccccCHHHHHHHHH-HHHHHHHHHHHHHHHHhhCCCccC
Confidence 9999999984 57899888766444 588888888888888766656543
No 15
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=1.8e-101 Score=976.20 Aligned_cols=746 Identities=21% Similarity=0.252 Sum_probs=592.1
Q ss_pred cCCCccCCccccch---HHHHHHHHHhhHHHHHHHHHHHHHHHhhhhcccCCCCCCchhhHHHHHHHHHhhHhHHHHHHH
Q psy6866 147 DGPNSLPQKYRINN---VYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQE 223 (961)
Q Consensus 147 ~G~N~i~~~~~~~~---~~~~~~~l~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 223 (961)
|.+|.+...+...+ ++.+++||.++++++++++++++++... .. .+.+...++++++++++++.+++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~---s~-----~~~~t~~~pL~~v~~~~~~~~~~ed 72 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPIL---SP-----TYRGTSIVPLAFVLIVTAIKEAIED 72 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCc---CC-----CCccHhHHhHHHHHHHHHHHHHHHH
Confidence 56799887653332 3566777777888888888877765311 11 1223445667777778888999999
Q ss_pred HHHHHHHHHHhccCCCeeEEEEC-CeEEEEECCCcccceEEEecCCCeeeccEEEEeeCC----ceeeccCcccccccee
Q psy6866 224 RKSSHITESFAKMIPTRATVIRN-GSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQD----LKAENSSLTGEVEPVT 298 (961)
Q Consensus 224 ~~~~~~~~~l~~l~~~~~~V~R~-G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~----l~vdeS~LTGEs~pv~ 298 (961)
++++++.++++ .+.++|+|+ |++++++++||+|||||.|++||+||||++|+++++ +.||||+|||||.|+.
T Consensus 73 ~~r~~~d~~~n---~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~ 149 (1057)
T TIGR01652 73 IRRRRRDKEVN---NRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKL 149 (1057)
T ss_pred HHHHHhHHHHh---CcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceE
Confidence 98888776654 468999997 899999999999999999999999999999999765 8999999999999999
Q ss_pred ccCCCC--------------------------------------CCccccCcceEeeeeeeee-eceEEEEEEcCCcChh
Q psy6866 299 CTLGAT--------------------------------------NSFAVESRNLVFFSTNLVS-GSGKGVVILTGSNTVM 339 (961)
Q Consensus 299 k~~~~~--------------------------------------~~~~~~~~n~l~~Gt~v~~-G~~~~vV~~tG~~T~~ 339 (961)
|.+... ...+++.+|++++||.+.+ |++.|+|++||.+|.+
T Consensus 150 k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~ 229 (1057)
T TIGR01652 150 RQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKL 229 (1057)
T ss_pred eecchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhh
Confidence 975311 1124566799999999999 9999999999999965
Q ss_pred hhHHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----cH---------------HHHHHHHHHh
Q psy6866 340 GKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGY-----NW---------------LNACVYVIGI 399 (961)
Q Consensus 340 g~i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~-----~~---------------~~~~~~~i~v 399 (961)
++ +....+.+++++++.++++..+++.++++++++.+++..++.. .| ...+..++.+
T Consensus 230 ~~---n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L 306 (1057)
T TIGR01652 230 MR---NATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLIL 306 (1057)
T ss_pred hh---cCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHH
Confidence 54 4556677899999999999999888888777777766433211 22 1255667788
Q ss_pred hhhccCchhHHHHHHHHHHHH------HHhhcc----cccccccchhhhccceeEEEecCcCccccCceEEEEEEEccee
Q psy6866 400 IVANVPEGLLATLTVSLTLTA------KRLASK----NCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREI 469 (961)
Q Consensus 400 lv~~vP~~L~~a~~~~l~~~~------~~l~k~----~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~ 469 (961)
+..++|++|+++++++++.++ .+|.++ +++||+.+++|+||++++||+|||||||+|+|+++++++++..
T Consensus 307 ~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~ 386 (1057)
T TIGR01652 307 FSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVS 386 (1057)
T ss_pred HhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEE
Confidence 889999999999999999999 788764 4999999999999999999999999999999999999999887
Q ss_pred eeecCcc---------c----------ccc--ccc-------------CCchHHHHHHHHHHHccCceecCCCCCccccc
Q psy6866 470 YHVKNGV---------D----------VDI--QNF-------------ETNTTYKTLVRAACLCSKAEFEPNQDNIPMRE 515 (961)
Q Consensus 470 ~~~~~~~---------~----------~~~--~~~-------------~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~ 515 (961)
|...... . ... ..+ +......+++.++++||++....+++. +...
T Consensus 387 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~-~~~~ 465 (1057)
T TIGR01652 387 YGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDG-PEEI 465 (1057)
T ss_pred ecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCC-CCce
Confidence 7532110 0 000 000 011234678889999999876532211 0011
Q ss_pred ccccCChhHHHHHHhhcccccchh--------------hHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHH
Q psy6866 516 RKASGDATEVGILHFIQPRIKSIQ--------------DVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEV 581 (961)
Q Consensus 516 ~~~~g~~~e~all~~~~~~~~~~~--------------~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~ 581 (961)
.+..+||+|.|+++++...+.... +....+++++++||+|+||||+++++.+++++++|+|||||.
T Consensus 466 ~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~ 545 (1057)
T TIGR01652 466 TYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTV 545 (1057)
T ss_pred EEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHH
Confidence 244689999999999876543211 122457888999999999999999998888899999999999
Q ss_pred HHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCcc-C-------C-C-----CCCCC
Q psy6866 582 IMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFK-F-------S-T-----DPMNF 647 (961)
Q Consensus 582 Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~-~-------~-~-----~~~~~ 647 (961)
|+++|+.. +++.++.+.+.+++|+.+|+||+++|+|.++++++.++.+ + . + +..+.
T Consensus 546 il~~~~~~----------~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~ 615 (1057)
T TIGR01652 546 IFKRLSSG----------GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAES 615 (1057)
T ss_pred HHHHhhcc----------chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 99999741 1234667888999999999999999999998654432110 0 0 0 01124
Q ss_pred CCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC-------------------
Q psy6866 648 PSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS------------------- 708 (961)
Q Consensus 648 ~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~------------------- 708 (961)
+|+||+|+|+++++||+|++++++|+.|++|||++||+|||+.+||.++|++||+++++..
T Consensus 616 iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i 695 (1057)
T TIGR01652 616 IEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAI 695 (1057)
T ss_pred HHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999875431
Q ss_pred -------------------CceeEechhhccCCHH----HHHHHHHhcCceEEeecCHHHHHHHHHHHhhc-CCEEEEEc
Q psy6866 709 -------------------DDNVFTGTDLRKITDE----ELKDILETNKELVFARTSPLQKLRIVELYQSL-DEIVAVTG 764 (961)
Q Consensus 709 -------------------~~~v~~g~~~~~~~~~----~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~-g~~V~~vG 764 (961)
..++++|+++..+.++ ++.+++..++.+||||++|+||.++|+.+|+. |++|+|||
T Consensus 696 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iG 775 (1057)
T TIGR01652 696 KFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIG 775 (1057)
T ss_pred HHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEe
Confidence 1258888888755433 46667777888899999999999999999998 99999999
Q ss_pred CCCCCHhhhhhCCeeEeecCCccH--hhhhccceEeecCCchHHHHHH-HHHHHHHHHHHHHHHHHHhhhHhhHHHHHHH
Q psy6866 765 DGVNDAPALKKADIGIAMGITGSE--VSKQTADMILMDDNFASIVLGI-EEGRLIFDNLKKSIAYILASNIPEILPFLFY 841 (961)
Q Consensus 765 DG~ND~~al~~AdvGIamg~~g~~--~a~~aad~vl~~~~~~~i~~~i-~~gR~~~~ni~~~i~~~l~~ni~~i~~~~~~ 841 (961)
||+||+|||++|||||++ .|+| .|+.+||+++.+ |..+.+++ .|||++|+|+++++.|.++.|++.+++.+++
T Consensus 776 DG~ND~~mlk~AdVGIgi--~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~ 851 (1057)
T TIGR01652 776 DGANDVSMIQEADVGVGI--SGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWY 851 (1057)
T ss_pred CCCccHHHHhhcCeeeEe--cChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999954 6777 589999999984 99999987 8899999999999999999999999988888
Q ss_pred HHhcCC---chhHHHHHHHHHHhhhhhhHhhhcc--cCCCCCcccCCCCC---CCcccccchhhHHHHHHHHHHHHHHHH
Q psy6866 842 IFLGIP---LPVSTVTVLCIDLGTDMWPAVSLAY--EKPESNIMSREPRN---PRTDHLVGRKLVTYAYFHLGILETLAG 913 (961)
Q Consensus 842 ~~~~~~---~pl~~~q~l~i~li~d~~~~lal~~--e~~~~~~~~~~P~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~ 913 (961)
.+++.. .++.+++++|+|++++.+|++++|. +++++++|.++|+. .+.++.++.+.|+.+ +..|+++++++
T Consensus 852 ~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~-~~~~~~~~~ii 930 (1057)
T TIGR01652 852 SFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGW-MLDGIYQSLVI 930 (1057)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHH-HHHHHHHHHHH
Confidence 776533 4689999999999999999999974 45678899999973 235678888887764 45799999988
Q ss_pred HHHHHHHHh
Q psy6866 914 FLTYFHVMY 922 (961)
Q Consensus 914 ~~~~~~~~~ 922 (961)
|+..++.+.
T Consensus 931 ~~~~~~~~~ 939 (1057)
T TIGR01652 931 FFFPMFAYI 939 (1057)
T ss_pred HHHHHHHHc
Confidence 876555554
No 16
>KOG0208|consensus
Probab=100.00 E-value=1e-98 Score=859.52 Aligned_cols=745 Identities=23% Similarity=0.300 Sum_probs=583.7
Q ss_pred CCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhcccCCCCCCchhhHHHHHHHH
Q psy6866 132 DRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALT 211 (961)
Q Consensus 132 ~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 211 (961)
.+||+..++.+|+..||+|.+..+. ++.+.+++++..++|..+..+.-+++. . .+|+|++++++++
T Consensus 158 ~~gL~~~~~~~r~~iyG~N~i~l~i-k~i~~iLv~EvL~PfYlFQ~fSv~lW~----~---------d~Y~~YA~cI~ii 223 (1140)
T KOG0208|consen 158 SNGLERQEIIDRRIIYGRNVISLPI-KSISQILVKEVLNPFYLFQAFSVALWL----A---------DSYYYYAFCIVII 223 (1140)
T ss_pred cCCccHHHHHhHHhhcCCceeeeec-ccHHHHHHHhccchHHHHHhHHhhhhh----c---------ccchhhhhHHHHH
Confidence 5899999999999999999999874 789999999877777666544433322 1 1578889999999
Q ss_pred HhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecC-CCeeeccEEEEeeCCceeeccCc
Q psy6866 212 CIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKI-GDKVPADIRLIEIQDLKAENSSL 290 (961)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~-Gd~IPaD~ill~g~~l~vdeS~L 290 (961)
.+.+++.+.|+.+++++.++++-+.. ..|+|+|||.+++|.++|||||||+++.+ |-..|||++|++|+ |.||||||
T Consensus 224 sv~Si~~sv~e~r~qs~rlr~mv~~~-~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~-civNEsmL 301 (1140)
T KOG0208|consen 224 SVYSIVLSVYETRKQSIRLRSMVKFT-CPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGD-CIVNESML 301 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC-ceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCc-EEeecccc
Confidence 99999999999999988887766653 58999999999999999999999999998 99999999999976 57999999
Q ss_pred cccccceeccCCCCCC---------ccccCcceEeeeeeeee------eceEEEEEEcCCcChhhhHHhhhccccCCCCc
Q psy6866 291 TGEVEPVTCTLGATNS---------FAVESRNLVFFSTNLVS------GSGKGVVILTGSNTVMGKIAGLTNRLEKKTTP 355 (961)
Q Consensus 291 TGEs~pv~k~~~~~~~---------~~~~~~n~l~~Gt~v~~------G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~ 355 (961)
||||.||.|.+..... ....++|.+|+||.+++ |.+.++|++||.+|..|++.+.+..+++....
T Consensus 302 TGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fk 381 (1140)
T KOG0208|consen 302 TGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFK 381 (1140)
T ss_pred cCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcccH
Confidence 9999999999875211 12246899999999985 66899999999999999999988877776667
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccch
Q psy6866 356 IEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQT 435 (961)
Q Consensus 356 l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~ 435 (961)
+-++..+|+..+++++++-.+...+.....+.+....+++++.++++.+|+|||++++++..++.+||.|+||+|.++++
T Consensus 382 fyrds~~fi~~l~~ia~~gfiy~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~r 461 (1140)
T KOG0208|consen 382 FYRDSFKFILFLVIIALIGFIYTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQR 461 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccc
Confidence 77888788877777766444444444445678888999999999999999999999999999999999999999999999
Q ss_pred hhhccceeEEEecCcCccccCceEEEEEEEccee-eeec--Ccccccc-cc---c---CCchHHHHHHHHHHHccCceec
Q psy6866 436 VETLGSIRTICTDKTGTLTQNKMTVLHLSFNREI-YHVK--NGVDVDI-QN---F---ETNTTYKTLVRAACLCSKAEFE 505 (961)
Q Consensus 436 ~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~-~~~~--~~~~~~~-~~---~---~~~~~~~~l~~~~~~c~~~~~~ 505 (961)
+...|++|++|||||||||++.+.+..+..-... .... .....+. +. + .....+..+..++|.||+....
T Consensus 462 In~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v 541 (1140)
T KOG0208|consen 462 INLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLV 541 (1140)
T ss_pred eeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhceeEEe
Confidence 9999999999999999999999999888752211 0000 0000000 00 0 0112345688999999977644
Q ss_pred CCCCCcccccccccCChhHHHHHHhhcccc--------------------cchhh---------HhhcCCeEEEecCCCC
Q psy6866 506 PNQDNIPMRERKASGDATEVGILHFIQPRI--------------------KSIQD---------VRNTFPKVTEVPFNSL 556 (961)
Q Consensus 506 ~~~~~~~~~~~~~~g~~~e~all~~~~~~~--------------------~~~~~---------~~~~~~~~~~~~F~s~ 556 (961)
.+. ..|||.|.-+.+...+.. ..+.. -...+.+++.+||+|.
T Consensus 542 ~g~---------l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~ 612 (1140)
T KOG0208|consen 542 DGT---------LVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSA 612 (1140)
T ss_pred CCe---------eccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchh
Confidence 332 233333333332222110 00000 0114667899999999
Q ss_pred CeeEEEEEEcCC-CeEEEEEeCChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCC
Q psy6866 557 NKFHLTVHFSPL-NKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFP 635 (961)
Q Consensus 557 ~k~~~~v~~~~~-~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~ 635 (961)
-+||++|+..++ ++..+|+|||||.|.+.|++... +..+++.++.|+.+|+||+|+|+|+++...+.
T Consensus 613 LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tv------------P~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~ 680 (1140)
T KOG0208|consen 613 LRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETV------------PADYQEVLKEYTHQGFRVIALASKELETSTLQ 680 (1140)
T ss_pred hheEEEEEecCCCCceEeeccCCHHHHHHhcCcccC------------CccHHHHHHHHHhCCeEEEEEecCccCcchHH
Confidence 999999998854 56899999999999999985433 34578889999999999999999999875332
Q ss_pred CCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCC------
Q psy6866 636 VNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSD------ 709 (961)
Q Consensus 636 ~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~------ 709 (961)
+..+. .++.+|+||+|+|++.|||++|++++.+|++|++|+||++|+||||..||..+||+||++.+....
T Consensus 681 ~~~~~---~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~ 757 (1140)
T KOG0208|consen 681 KAQKL---SRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELE 757 (1140)
T ss_pred HHhhc---cHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEecc
Confidence 22223 344589999999999999999999999999999999999999999999999999999998754220
Q ss_pred ----------------------------------------------ceeEechhhccC---CHHHHHHHHHhcCceEEee
Q psy6866 710 ----------------------------------------------DNVFTGTDLRKI---TDEELKDILETNKELVFAR 740 (961)
Q Consensus 710 ----------------------------------------------~~v~~g~~~~~~---~~~~~~~~~~~~~~~v~ar 740 (961)
...++|+.+.-+ ..+.+++++.+.. ||||
T Consensus 758 ~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~--VfAR 835 (1140)
T KOG0208|consen 758 PPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGT--VFAR 835 (1140)
T ss_pred CCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCe--EEee
Confidence 233445444332 3456677777765 9999
Q ss_pred cCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHH
Q psy6866 741 TSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNL 820 (961)
Q Consensus 741 ~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni 820 (961)
|+|.||.++|+.||+.|+.|+|||||+|||.|||+|||||+++. ..|.-||.+.-.-.+...+...|++||.....-
T Consensus 836 MsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSe---aEASvAApFTSk~~~I~cVp~vIrEGRaALVTS 912 (1140)
T KOG0208|consen 836 MSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSE---AEASVAAPFTSKTPSISCVPDVIREGRAALVTS 912 (1140)
T ss_pred cCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhh---hhHhhcCccccCCCchhhHhHHHhhhhhhhhhh
Confidence 99999999999999999999999999999999999999999862 346778899988889999999999999999888
Q ss_pred HHHHHHHHhhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCCCCCcccCCCCCCCcccccchhhHHH
Q psy6866 821 KKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTY 900 (961)
Q Consensus 821 ~~~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~~~~~ 900 (961)
-..++|...+.+...+..+ .++.....++..|.|+++++..+.-++.+++.+|..++-..||. ..+++++.+.-
T Consensus 913 f~~FkYMalYs~iqFisv~--~LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP~----~~L~s~~~~~~ 986 (1140)
T KOG0208|consen 913 FACFKYMALYSAIQFISVV--FLYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRPP----TNLLSKKILVP 986 (1140)
T ss_pred HHHHHHHHHHHHHHHHhhh--eeeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCCC----ccccccchhhh
Confidence 8888888877766654322 23345667899999999999988889999999999888776663 45677666554
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q psy6866 901 AYFHLGILETLAGFLTYFHVMYDAGWDP 928 (961)
Q Consensus 901 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 928 (961)
-.+| -++..+..+..|+++....|+.|
T Consensus 987 l~~q-~vli~l~q~i~~l~~~~qpw~~p 1013 (1140)
T KOG0208|consen 987 LLLQ-IVLICLVQWILTLIVEPQPWYEP 1013 (1140)
T ss_pred hHHH-HHHHHHHHHhhheeeccccceec
Confidence 3333 44456666666777766777664
No 17
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=1.6e-94 Score=901.55 Aligned_cols=748 Identities=19% Similarity=0.240 Sum_probs=581.6
Q ss_pred hcCCCccCCccccchHHHHHHHHHhhHH----HHHHHHHHHHHHHhhhhcccCCCCCCchhhHHHHHHHHHhhHhHHHHH
Q psy6866 146 KDGPNSLPQKYRINNVYVLVGYIFRGFS----ALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFY 221 (961)
Q Consensus 146 ~~G~N~i~~~~~~~~~~~~~~~l~~~~~----~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 221 (961)
+|..|.+...+ .++|-++.+.++++|. +.+++.+++.++. .... ...+...++++++++++++.+.+
T Consensus 86 ~f~~N~i~TsK-Yt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip---~~s~-----~~~~t~~~PL~~vl~v~~ike~~ 156 (1178)
T PLN03190 86 EFAGNSIRTAK-YSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLP---QLAV-----FGRGASILPLAFVLLVTAVKDAY 156 (1178)
T ss_pred cCCCCeeeccc-cccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCC---Cccc-----CCcchHHHHHHHHHHHHHHHHHH
Confidence 58999998865 6677777777776664 4444444444322 1111 12234566788888888888888
Q ss_pred HHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCC----ceeeccCccccccce
Q psy6866 222 QERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQD----LKAENSSLTGEVEPV 297 (961)
Q Consensus 222 ~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~----l~vdeS~LTGEs~pv 297 (961)
++++++++.+..+ +..++|+|+|++++++|++|+|||+|+|++||++||||+|+++++ +.||||+|||||.|+
T Consensus 157 Ed~~r~k~d~~~N---~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k 233 (1178)
T PLN03190 157 EDWRRHRSDRIEN---NRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLK 233 (1178)
T ss_pred HHHHHHHhHHhhc---CcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeee
Confidence 8888777776654 468999999999999999999999999999999999999998654 899999999999999
Q ss_pred eccCCCCCC-----------------------------------ccccCcceEeeeeeeee-eceEEEEEEcCCcChhhh
Q psy6866 298 TCTLGATNS-----------------------------------FAVESRNLVFFSTNLVS-GSGKGVVILTGSNTVMGK 341 (961)
Q Consensus 298 ~k~~~~~~~-----------------------------------~~~~~~n~l~~Gt~v~~-G~~~~vV~~tG~~T~~g~ 341 (961)
.|.+++... .++..+|++++|+.+.+ .++.|+|++||.+| |
T Consensus 234 ~k~~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dT---K 310 (1178)
T PLN03190 234 TRYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRET---K 310 (1178)
T ss_pred EecccchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhh---h
Confidence 998653210 12345788999999886 46999999999999 6
Q ss_pred HHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hc------cH--------------------HH-
Q psy6866 342 IAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYI---GY------NW--------------------LN- 391 (961)
Q Consensus 342 i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~---~~------~~--------------------~~- 391 (961)
++.+....+.|.+++++.++++..+++.+.++++++++++...+ .. .| ..
T Consensus 311 ~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (1178)
T PLN03190 311 AMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEI 390 (1178)
T ss_pred HhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHH
Confidence 66666667789999999999999998888887877766654221 00 01 11
Q ss_pred HHHHH--HHhhhhccCchhHHHHHHHHHHHHHHhhccc----------ccccccchhhhccceeEEEecCcCccccCceE
Q psy6866 392 ACVYV--IGIIVANVPEGLLATLTVSLTLTAKRLASKN----------CIVRRLQTVETLGSIRTICTDKTGTLTQNKMT 459 (961)
Q Consensus 392 ~~~~~--i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~----------ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~ 459 (961)
.+.++ +.++...+|++|++++++++...+.+|.++. +.||+.+.+|+||+|++||+|||||||+|+|+
T Consensus 391 ~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~ 470 (1178)
T PLN03190 391 FFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKME 470 (1178)
T ss_pred HHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEE
Confidence 12222 3344578999999999999988888887765 77999999999999999999999999999999
Q ss_pred EEEEEEcceeeeecCcc----------ccccc------cc----------------CCchHHHHHHHHHHHccCceecCC
Q psy6866 460 VLHLSFNREIYHVKNGV----------DVDIQ------NF----------------ETNTTYKTLVRAACLCSKAEFEPN 507 (961)
Q Consensus 460 v~~~~~~~~~~~~~~~~----------~~~~~------~~----------------~~~~~~~~l~~~~~~c~~~~~~~~ 507 (961)
++++++++..|...... ..++. .. +......+++.++++||++.+...
T Consensus 471 fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~ 550 (1178)
T PLN03190 471 FQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVV 550 (1178)
T ss_pred EEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeecc
Confidence 99999988777432100 00000 00 001224568899999999876421
Q ss_pred CC--Cccc-ccccccCChhHHHHHHhhccccc------------chhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEE
Q psy6866 508 QD--NIPM-RERKASGDATEVGILHFIQPRIK------------SIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYF 572 (961)
Q Consensus 508 ~~--~~~~-~~~~~~g~~~e~all~~~~~~~~------------~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~ 572 (961)
++ +... ...+..++|+|.||+.++...|. +..+.+..|+++.++||+|+||||+++++.++++++
T Consensus 551 ~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~ 630 (1178)
T PLN03190 551 DDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVK 630 (1178)
T ss_pred CCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEE
Confidence 11 1000 11245669999999999987664 344456778999999999999999999988888899
Q ss_pred EEEeCChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCcc-CC----------
Q psy6866 573 LLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFK-FS---------- 641 (961)
Q Consensus 573 ~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~-~~---------- 641 (961)
+|+|||||.|+++|+... +.+.++.+.+.+++|+++|+|||++|+|.++++++..+.. +.
T Consensus 631 l~~KGA~e~il~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~ 701 (1178)
T PLN03190 631 VFVKGADTSMFSVIDRSL---------NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRA 701 (1178)
T ss_pred EEEecCcHHHHHhhcccc---------cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhH
Confidence 999999999999997532 1234567788899999999999999999998765543211 00
Q ss_pred ---CCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC----------
Q psy6866 642 ---TDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS---------- 708 (961)
Q Consensus 642 ---~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~---------- 708 (961)
.+..+.+|+||+++|+++++|++|++++++|+.|+++||++||+|||+..||.+||++|||++++..
T Consensus 702 ~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~ 781 (1178)
T PLN03190 702 ALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKE 781 (1178)
T ss_pred HHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchh
Confidence 0112347899999999999999999999999999999999999999999999999999999765421
Q ss_pred ------------------------------------CceeEechhhccCCH----HHHHHHHHhcCceEEeecCHHHHHH
Q psy6866 709 ------------------------------------DDNVFTGTDLRKITD----EELKDILETNKELVFARTSPLQKLR 748 (961)
Q Consensus 709 ------------------------------------~~~v~~g~~~~~~~~----~~~~~~~~~~~~~v~ar~~p~~K~~ 748 (961)
..++++|.++..+.+ +++.++..+++.+||||++|.||++
T Consensus 782 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~ 861 (1178)
T PLN03190 782 SCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAG 861 (1178)
T ss_pred hHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHH
Confidence 136888888887754 5677888888888999999999999
Q ss_pred HHHHHhhc-CCEEEEEcCCCCCHhhhhhCCeeEeecCCccH--hhhhccceEeecCCchHHHHHH-HHHHHHHHHHHHHH
Q psy6866 749 IVELYQSL-DEIVAVTGDGVNDAPALKKADIGIAMGITGSE--VSKQTADMILMDDNFASIVLGI-EEGRLIFDNLKKSI 824 (961)
Q Consensus 749 iv~~l~~~-g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~--~a~~aad~vl~~~~~~~i~~~i-~~gR~~~~ni~~~i 824 (961)
+|+.+|+. +++|+|||||+||++||++||||| |+.|+| .|..+||+.+.+..+ +.+++ .|||+.|.|+.+.+
T Consensus 862 IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI--GIsG~EG~qA~~aSDfaI~~Fr~--L~rLLlvHGr~~y~R~s~~i 937 (1178)
T PLN03190 862 IVALVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQEGRQAVMASDFAMGQFRF--LVPLLLVHGHWNYQRMGYMI 937 (1178)
T ss_pred HHHHHHhcCCcEEEEECCCcchHHHHHhcCeee--eecCchhHHHHHhhccchhhhHH--HHHHHHHhCHHHHHHHHHHH
Confidence 99999987 589999999999999999999999 778999 789999999996554 55444 48999999999999
Q ss_pred HHHHhhhHhhHHHHHHHHHhcCCch---hHHHHHHHHHHhhhhhhHhhh-cccCC-CCCcccCCCCC---CCcccccchh
Q psy6866 825 AYILASNIPEILPFLFYIFLGIPLP---VSTVTVLCIDLGTDMWPAVSL-AYEKP-ESNIMSREPRN---PRTDHLVGRK 896 (961)
Q Consensus 825 ~~~l~~ni~~i~~~~~~~~~~~~~p---l~~~q~l~i~li~d~~~~lal-~~e~~-~~~~~~~~P~~---~~~~~~~~~~ 896 (961)
+|.+++|++.+++.++|.++...++ ...+.+.++|++++.+|.+++ .+|+. +++.+.+.|.- .+.+..++.+
T Consensus 938 ~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~ 1017 (1178)
T PLN03190 938 LYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSK 1017 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHH
Confidence 9999999999999999988876554 467888899999999999998 46652 44455556632 2356678888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy6866 897 LVTYAYFHLGILETLAGFLTYFHVMY 922 (961)
Q Consensus 897 ~~~~~~~~~g~~~~~~~~~~~~~~~~ 922 (961)
.|+. |...|+++++++|+..++.+.
T Consensus 1018 ~F~~-w~~~~i~qs~iiff~~~~~~~ 1042 (1178)
T PLN03190 1018 LFWL-TMIDTLWQSAVVFFVPLFAYW 1042 (1178)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 8776 455799999998876555544
No 18
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=5e-90 Score=812.32 Aligned_cols=555 Identities=22% Similarity=0.307 Sum_probs=445.8
Q ss_pred HHHhhHHHHHHHHHHHHHHHhhhhcccCCCCCCchhhHHHHHHHHHhhHhHH----HHHHHHHHHHHHHHHhccCCC-ee
Q psy6866 167 YIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMF----SFYQERKSSHITESFAKMIPT-RA 241 (961)
Q Consensus 167 ~l~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~~~-~~ 241 (961)
++++++.++++++++++++...+........| ..+++++++++++++.++ +.++|+|+++..+.|+++.++ ++
T Consensus 29 ~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~--~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a 106 (673)
T PRK14010 29 MIKNPIMFVVEVGMLLALGLTIYPDLFHQESV--SRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKA 106 (673)
T ss_pred HHHChHHHHHHHHHHHHHHHHHHhhhcccccc--cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 34578889999999999865433211111111 123444444444444444 444578999999999999886 67
Q ss_pred E-EEECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCCceeeccCccccccceeccCCCCCCccccCcceEeeeee
Q psy6866 242 T-VIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTN 320 (961)
Q Consensus 242 ~-V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~ 320 (961)
+ |.|||++++|++++|+|||+|.|++||+|||||+|++|.. .||||+|||||.||.|.+|.. +++ +|+||.
T Consensus 107 ~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d------~~~-V~aGT~ 178 (673)
T PRK14010 107 RRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGD------FDN-VIGGTS 178 (673)
T ss_pred EEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCc------cCe-eecCce
Confidence 6 6799999999999999999999999999999999999865 999999999999999998721 123 999999
Q ss_pred eeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhh
Q psy6866 321 LVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGII 400 (961)
Q Consensus 321 v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vl 400 (961)
+.+|++.++|+++|.+|.+||+..+++..+.++||+|.....+...++.+.+++. .++..+....++...+.+.++++
T Consensus 179 v~~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~ii~l~~~--~~~~~~~~~~~~~~~~~~~val~ 256 (673)
T PRK14010 179 VASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTIIFLVVI--LTMYPLAKFLNFNLSIAMLIALA 256 (673)
T ss_pred eecceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhHHHHHHH--HHHHHHHhhccHHHHHHHHHHHH
Confidence 9999999999999999999999999999998999999776665544433222211 11111111123445667778888
Q ss_pred hhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccc
Q psy6866 401 VANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDI 480 (961)
Q Consensus 401 v~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~ 480 (961)
+++|||+|+..++++.+.++.||+|+|+++|+++++|+||++|++|||||||||+|++.++++...+
T Consensus 257 V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~------------- 323 (673)
T PRK14010 257 VCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVK------------- 323 (673)
T ss_pred HHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCC-------------
Confidence 8899999999999999999999999999999999999999999999999999999887766543211
Q ss_pred cccCCchHHHHHHHHHHHccCceecCCCCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeE
Q psy6866 481 QNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFH 560 (961)
Q Consensus 481 ~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~ 560 (961)
....++++..+++|+.. ..+|.+.|+++++.+.+.+... .....+||++++|+|
T Consensus 324 -----~~~~~~ll~~a~~~~~~----------------s~~P~~~AIv~~a~~~~~~~~~-----~~~~~~pF~~~~k~~ 377 (673)
T PRK14010 324 -----SSSFERLVKAAYESSIA----------------DDTPEGRSIVKLAYKQHIDLPQ-----EVGEYIPFTAETRMS 377 (673)
T ss_pred -----CccHHHHHHHHHHhcCC----------------CCChHHHHHHHHHHHcCCCchh-----hhcceecccccccee
Confidence 01223467777778632 1267888999988754322211 122358999999988
Q ss_pred EEEEEcCCCeEEEEEeCChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccC
Q psy6866 561 LTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKF 640 (961)
Q Consensus 561 ~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~ 640 (961)
.+.+. ++ .+.||+++.++++|+. .|...+ ..+.+..++++++|+|+++++
T Consensus 378 gv~~~---g~--~i~kGa~~~il~~~~~----~g~~~~------~~~~~~~~~~a~~G~~~l~v~--------------- 427 (673)
T PRK14010 378 GVKFT---TR--EVYKGAPNSMVKRVKE----AGGHIP------VDLDALVKGVSKKGGTPLVVL--------------- 427 (673)
T ss_pred EEEEC---CE--EEEECCHHHHHHHhhh----cCCCCc------hHHHHHHHHHHhCCCeEEEEE---------------
Confidence 87642 32 4559999999999984 222211 124556678899999999876
Q ss_pred CCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhcc
Q psy6866 641 STDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRK 720 (961)
Q Consensus 641 ~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~ 720 (961)
.|++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++||..
T Consensus 428 ---------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~---------------- 482 (673)
T PRK14010 428 ---------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR---------------- 482 (673)
T ss_pred ---------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce----------------
Confidence 2468999999999999999999999999999999999999999999999999954
Q ss_pred CCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeec
Q psy6866 721 ITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMD 800 (961)
Q Consensus 721 ~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~ 800 (961)
+|||++|+||.++|+.+|++|++|+|+|||+||+|||++|||||||| +|+|+||++||+|++|
T Consensus 483 ----------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLld 545 (673)
T PRK14010 483 ----------------FVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLD 545 (673)
T ss_pred ----------------EEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcC
Confidence 89999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHh
Q psy6866 801 DNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFL 844 (961)
Q Consensus 801 ~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~~~~~~~ 844 (961)
|||+.|++++++||++|.|+++++.|.++.|+..++.++...|.
T Consensus 546 d~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~ 589 (673)
T PRK14010 546 SNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFM 589 (673)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998776654444
No 19
>KOG0205|consensus
Probab=100.00 E-value=1.4e-90 Score=758.21 Aligned_cols=745 Identities=26% Similarity=0.423 Sum_probs=573.2
Q ss_pred cCCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhcccCC
Q psy6866 116 HLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNE 195 (961)
Q Consensus 116 ~~~~~~~l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~~~~~~~~~~ 195 (961)
..++.+++.+.|..+.+ |||.+|+++|+++||+|++..+ +.+.+.+|+..+++|++++.-.+|++.+.. . .++
T Consensus 19 ~~~p~eeVfeeL~~t~~-GLt~~E~~eRlk~fG~NkleEk-ken~~lKFl~Fm~~PlswVMEaAAimA~~L---a--ng~ 91 (942)
T KOG0205|consen 19 EAIPIEEVFEELLCTRE-GLTSDEVEERLKIFGPNKLEEK-KESKFLKFLGFMWNPLSWVMEAAAIMAIGL---A--NGG 91 (942)
T ss_pred ccCchhhhHHHHhcCCC-CCchHHHHHHHHhhCchhhhhh-hhhHHHHHHHHHhchHHHHHHHHHHHHHHH---h--cCC
Confidence 36788899888876654 9999999999999999999975 467788899999999999988888766432 1 111
Q ss_pred CCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecCCCeeeccE
Q psy6866 196 EKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADI 275 (961)
Q Consensus 196 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ 275 (961)
..+ ..|.-...+.+++++++.+.|.||+++.+...++++-+..++.|+|||+|.++.+++||||||+.++.|++||||+
T Consensus 92 ~~~-~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDa 170 (942)
T KOG0205|consen 92 GRP-PDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADA 170 (942)
T ss_pred CCC-cchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEecCcc
Confidence 111 1234445566677889999999999999999999998899999999999999999999999999999999999999
Q ss_pred EEEeeCCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCc
Q psy6866 276 RLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTP 355 (961)
Q Consensus 276 ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~ 355 (961)
+|+++.-+.||+|.|||||.||+|.+|+. +|+||+|.+|++.++|++||.+|..|+-+.++.. -....-
T Consensus 171 RLl~gD~LkiDQSAlTGESLpvtKh~gd~----------vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GH 239 (942)
T KOG0205|consen 171 RLLEGDPLKIDQSALTGESLPVTKHPGDE----------VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGH 239 (942)
T ss_pred ceecCCccccchhhhcCCccccccCCCCc----------eecccccccceEEEEEEEeccceeehhhHHhhcC-CCCccc
Confidence 99999999999999999999999999987 9999999999999999999999999999999887 555667
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhccHHHHHHHHHHhhhhc-cCchhHHHHHHHHHHHHHHhhccccccccc
Q psy6866 356 IEQEVQHFMRLISMWALTLGAIC-FLLALYIGYNWLNACVYVIGIIVAN-VPEGLLATLTVSLTLTAKRLASKNCIVRRL 433 (961)
Q Consensus 356 l~~~~~~~~~~l~~i~~~~~~i~-~i~~~~~~~~~~~~~~~~i~vlv~~-vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~ 433 (961)
+++-++.+..++.+.+. +++++ .++.++..........+-+.++++. +|.|||..++..++.++.||+++|.+++++
T Consensus 240 FqkVLt~IGn~ci~si~-~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrm 318 (942)
T KOG0205|consen 240 FQKVLTGIGNFCICSIA-LGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRM 318 (942)
T ss_pred HHHHHHhhhhHHHHHHH-HHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHH
Confidence 77777777666544322 22222 2222333333334444445555555 999999999999999999999999999999
Q ss_pred chhhhccceeEEEecCcCccccCceEEEE--E--EEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCC
Q psy6866 434 QTVETLGSIRTICTDKTGTLTQNKMTVLH--L--SFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQD 509 (961)
Q Consensus 434 ~~~e~lg~v~~i~~DKTGTLT~n~m~v~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~ 509 (961)
.++|.|+.+|++|+|||||||.|+++|.+ + +..+ -.-++++..+|..+.
T Consensus 319 tAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~g-------------------v~~D~~~L~A~rAsr-------- 371 (942)
T KOG0205|consen 319 TAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKG-------------------VDKDDVLLTAARASR-------- 371 (942)
T ss_pred HHHHHhhCceEEeecCcCceeecceecCcCcceeeecC-------------------CChHHHHHHHHHHhh--------
Confidence 99999999999999999999999999866 2 1111 111235556665542
Q ss_pred CcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhhcc
Q psy6866 510 NIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTM 589 (961)
Q Consensus 510 ~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~ 589 (961)
....|+.|.|+++... ++.+.+..++.++.+|||+..|+....+..++|+.+..+|||||.|++.|+.
T Consensus 372 -------~en~DAID~A~v~~L~----dPKeara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~- 439 (942)
T KOG0205|consen 372 -------KENQDAIDAAIVGMLA----DPKEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNE- 439 (942)
T ss_pred -------hcChhhHHHHHHHhhc----CHHHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhc-
Confidence 1234667778887654 3567788899999999999999998888889999999999999999999973
Q ss_pred cccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChH
Q psy6866 590 MAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVP 669 (961)
Q Consensus 590 ~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~ 669 (961)
+.+.++++.+.+++|+++|+|-+++|++..++... +....-..|+|++-+-||+|.+..
T Consensus 440 ----------~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~-----------~~~g~pw~~~gllp~fdpprhdsa 498 (942)
T KOG0205|consen 440 ----------DHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTK-----------ESPGGPWEFVGLLPLFDPPRHDSA 498 (942)
T ss_pred ----------cCcchHHHHHHHHHHHHhcchhhhhhhhccccccc-----------cCCCCCcccccccccCCCCccchH
Confidence 23456788899999999999999999987765321 112345789999999999999999
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechh-hccCCHHHHHHHHHhcCceEEeecCHHHHHH
Q psy6866 670 DAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTD-LRKITDEELKDILETNKELVFARTSPLQKLR 748 (961)
Q Consensus 670 ~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~-~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~ 748 (961)
++|++....|+.|.|+|||....++..++++|+-.+-.... .+-|.+ -..+.....+++++..+ -||.+.|+||++
T Consensus 499 ~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss-~llG~~~~~~~~~~~v~elie~ad--gfAgVfpehKy~ 575 (942)
T KOG0205|consen 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS-ALLGLGKDGSMPGSPVDELIEKAD--GFAGVFPEHKYE 575 (942)
T ss_pred HHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCch-hhccCCCCCCCCCCcHHHHhhhcc--CccccCHHHHHH
Confidence 99999999999999999999999999999999865422211 111111 11222334455555544 799999999999
Q ss_pred HHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6866 749 IVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYIL 828 (961)
Q Consensus 749 iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l 828 (961)
+|+.||++|+.++|+|||+||+|+||.||+|||+. .++|.|+.++|+|++.+.++.|+.++..+|.+|++++.+..|.+
T Consensus 576 iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyav 654 (942)
T KOG0205|consen 576 IVKILQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 654 (942)
T ss_pred HHHHHhhcCceecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeee
Confidence 99999999999999999999999999999999998 89999999999999999999999999999999999999999988
Q ss_pred hhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCCCCCcccCCCCCCCcccccchhhHHHHHHHHHHH
Q psy6866 829 ASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGIL 908 (961)
Q Consensus 829 ~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~g~~ 908 (961)
+..+-.++.+.+. .+-+..-++|..++.+-++.|. +.++.+.+. .|+.+..+.+.-+.+|...+ .+|.+
T Consensus 655 sitiriv~gfml~-alIw~~df~pfmvliiailnd~-t~mtis~d~--------v~psp~pdswkl~~ifatgv-Vlgty 723 (942)
T KOG0205|consen 655 SITIRIVFGFMLI-ALIWEFDFSPFMVLIIAILNDG-TIMTISKDR--------VKPSPTPDSWKLKEIFATGV-VLGTY 723 (942)
T ss_pred hhHHHHHHHHHHH-HHHHHhcCCHHHHHHHHHhcCC-ceEEEEccc--------CCCCCCCcccchhhhheeee-EehhH
Confidence 7666554332221 1122334566666666655553 334444332 22233334444444554332 24666
Q ss_pred HHHHHHHHHHHHHhhcCCCCccccccccc--cCCC----Cc----------cccccCcccccccc
Q psy6866 909 ETLAGFLTYFHVMYDAGWDPMDLLNIRKS--WESN----NN----------LEDSYHKMWTRTER 957 (961)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~----------~~~~~~~~~~~~~~ 957 (961)
+++.+ ..|||+.+...|.+ ..||+.+. |..+ .. +.-..+..|.|.||
T Consensus 724 ma~~t-vif~w~~~~t~ff~-~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~er 786 (942)
T KOG0205|consen 724 MAIMT-VIFFWAAYTTDFFP-RTFGVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVER 786 (942)
T ss_pred HHHHH-HHHhhhhccccccc-cccceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccC
Confidence 55554 34666666666666 55666533 3222 11 45567888888887
No 20
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=8.2e-88 Score=794.22 Aligned_cols=547 Identities=24% Similarity=0.311 Sum_probs=450.1
Q ss_pred HHHhhHHHHHHHHHHHHHHHhhhhccc-CCCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCC-eeEEE
Q psy6866 167 YIFRGFSALLWFGALLSFLAYLLEAET-NEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPT-RATVI 244 (961)
Q Consensus 167 ~l~~~~~~~l~~~ails~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~V~ 244 (961)
++.+++.++++++++++++........ ....+...+.+++++++.+++..+.+.++++|+++..+.|+++.+. +++|+
T Consensus 30 ~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~vi 109 (679)
T PRK01122 30 QIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARKL 109 (679)
T ss_pred HhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEE
Confidence 456788999999999998765432211 1112224455566677777778888899999999999999999885 79999
Q ss_pred ECCe-EEEEECCCcccceEEEecCCCeeeccEEEEeeCCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeee
Q psy6866 245 RNGS-VKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVS 323 (961)
Q Consensus 245 R~G~-~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~ 323 (961)
|||+ +++|++++|+|||+|.|++||+|||||+|++|. ..||||+|||||.||.|.+|+. ..| +|+||.+.+
T Consensus 110 r~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~-a~VDESaLTGES~PV~K~~G~~------~~~-V~aGT~v~~ 181 (679)
T PRK01122 110 REPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGV-ASVDESAITGESAPVIRESGGD------FSS-VTGGTRVLS 181 (679)
T ss_pred ECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc-EEEEcccccCCCCceEeCCCCc------cCe-EEeceEEEe
Confidence 9988 899999999999999999999999999999986 5999999999999999998853 123 999999999
Q ss_pred eceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhc
Q psy6866 324 GSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVAN 403 (961)
Q Consensus 324 G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~ 403 (961)
|.++++|+++|.+|.+|++..+++..+.+++|++...+.+...+..+.++++++.+.++++.+..+ .+.+++++++++
T Consensus 182 G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~~g~~~--~l~~~iallV~a 259 (679)
T PRK01122 182 DWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAYSGGAL--SITVLVALLVCL 259 (679)
T ss_pred eeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchH--HHHHHHHHHHHc
Confidence 999999999999999999999999998999999988888776665544443333333333333333 677889999999
Q ss_pred cCchhHHHHHHHHHHHHHHhhcccccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCccccccccc
Q psy6866 404 VPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNF 483 (961)
Q Consensus 404 vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 483 (961)
|||+|+..+++....++.||+|+|+++|+++++|+||++|++|||||||||+|+|++++++..+.
T Consensus 260 iP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~--------------- 324 (679)
T PRK01122 260 IPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPG--------------- 324 (679)
T ss_pred ccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCC---------------
Confidence 99999999999999999999999999999999999999999999999999999999988763211
Q ss_pred CCchHHHHHHHHHHHccCceecCCCCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEE
Q psy6866 484 ETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTV 563 (961)
Q Consensus 484 ~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v 563 (961)
...++++.++++|+... . +|...|+++++... .........++..+.+||++.++++.+.
T Consensus 325 ---~~~~~ll~~a~~~s~~s------~----------hP~~~AIv~~a~~~-~~~~~~~~~~~~~~~~pF~s~~~~~gv~ 384 (679)
T PRK01122 325 ---VTEEELADAAQLSSLAD------E----------TPEGRSIVVLAKQR-FNLRERDLQSLHATFVPFSAQTRMSGVD 384 (679)
T ss_pred ---CCHHHHHHHHHHhcCCC------C----------CchHHHHHHHHHhh-cCCCchhhccccceeEeecCcCceEEEE
Confidence 11234677778876532 1 23446888887642 1111111124567789999998877764
Q ss_pred EEcCCCeEEEEEeCChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCC
Q psy6866 564 HFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTD 643 (961)
Q Consensus 564 ~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~ 643 (961)
+. + ..+.||++|.+++.|.. .|.. .++++++..++++++|.|++++|+
T Consensus 385 ~~---g--~~~~kGa~e~il~~~~~----~g~~------~~~~~~~~~~~~a~~G~~~l~va~----------------- 432 (679)
T PRK01122 385 LD---G--REIRKGAVDAIRRYVES----NGGH------FPAELDAAVDEVARKGGTPLVVAE----------------- 432 (679)
T ss_pred EC---C--EEEEECCHHHHHHHHHh----cCCc------ChHHHHHHHHHHHhCCCcEEEEEE-----------------
Confidence 42 3 57899999999999963 2222 124566778889999999999982
Q ss_pred CCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCH
Q psy6866 644 PMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITD 723 (961)
Q Consensus 644 ~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~ 723 (961)
|++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++||..
T Consensus 433 -------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~------------------- 486 (679)
T PRK01122 433 -------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------------------- 486 (679)
T ss_pred -------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE-------------------
Confidence 458999999999999999999999999999999999999999999999999953
Q ss_pred HHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCc
Q psy6866 724 EELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNF 803 (961)
Q Consensus 724 ~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~ 803 (961)
+|||++|+||.++|+.+|++|++|+|+|||+||+|||++|||||||| +|+|+||++||+|++||||
T Consensus 487 -------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~ 552 (679)
T PRK01122 487 -------------FLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNP 552 (679)
T ss_pred -------------EEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCH
Confidence 89999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy6866 804 ASIVLGIEEGRLIFDNLKKSIAYILAS 830 (961)
Q Consensus 804 ~~i~~~i~~gR~~~~ni~~~i~~~l~~ 830 (961)
++|++++++||++.-.--..-.|.+..
T Consensus 553 s~Iv~av~~GR~~~~tr~~~~~f~~~n 579 (679)
T PRK01122 553 TKLIEVVEIGKQLLMTRGALTTFSIAN 579 (679)
T ss_pred HHHHHHHHHHHHHHhhhHhhhhhhHHH
Confidence 999999999999985555555666653
No 21
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=2.5e-83 Score=754.23 Aligned_cols=556 Identities=23% Similarity=0.311 Sum_probs=448.8
Q ss_pred HHHhhHHHHHHHHHHHHHHHhhhhcccCCCCCCchhhH---HHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCC-eeE
Q psy6866 167 YIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWL---GIILALTCIVTGMFSFYQERKSSHITESFAKMIPT-RAT 242 (961)
Q Consensus 167 ~l~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~ 242 (961)
++.+++.++++++++++++..+.............|+. .+++++.+++..+.+.++++|+++..++|+++.++ .++
T Consensus 29 ~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a~ 108 (675)
T TIGR01497 29 QWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFAK 108 (675)
T ss_pred HhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEE
Confidence 45578888999999999876443111111001011222 34445556667778889999999999999998876 488
Q ss_pred EEE-CCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCCceeeccCccccccceeccCCCCCCccccCcceEeeeeee
Q psy6866 243 VIR-NGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNL 321 (961)
Q Consensus 243 V~R-~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v 321 (961)
|+| ||++++|++++|+|||+|.|++||+|||||++++|+ +.||||+|||||.||.|.+|+.. ..+|+||.+
T Consensus 109 vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~~~-------~~V~aGT~v 180 (675)
T TIGR01497 109 LLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-ASVDESAITGESAPVIKESGGDF-------ASVTGGTRI 180 (675)
T ss_pred EEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-EEEEcccccCCCCceeecCCCCc-------ceeecCcEE
Confidence 885 899999999999999999999999999999999985 69999999999999999988631 128999999
Q ss_pred eeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhh
Q psy6866 322 VSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIV 401 (961)
Q Consensus 322 ~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv 401 (961)
.+|++.++|+++|.+|.+|++..+++..+.+++|+|...+.+...+.++.+++.++++.+..+.+ ....+..++++++
T Consensus 181 ~~G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~~~~~~~~~~--~~~~~~~lvallV 258 (675)
T TIGR01497 181 LSDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTATLWPFAAYGG--NAISVTVLVALLV 258 (675)
T ss_pred EeeEEEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--hhHHHHHHHHHHH
Confidence 99999999999999999999999999988899999988887776655444333322222111222 2235667789999
Q ss_pred hccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCccccccc
Q psy6866 402 ANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQ 481 (961)
Q Consensus 402 ~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~ 481 (961)
++|||+|+..++.....++.||+|+|+++|++.++|+||++|++|||||||||+|+|++++++..+.
T Consensus 259 ~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~------------- 325 (675)
T TIGR01497 259 CLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG------------- 325 (675)
T ss_pred HhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCC-------------
Confidence 9999988777777777899999999999999999999999999999999999999999998764211
Q ss_pred ccCCchHHHHHHHHHHHccCceecCCCCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEE
Q psy6866 482 NFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHL 561 (961)
Q Consensus 482 ~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~ 561 (961)
...++++..+++|+... .+|.+.|+++++...+..... ..++.....||++.++++.
T Consensus 326 -----~~~~~ll~~aa~~~~~s----------------~hP~a~Aiv~~a~~~~~~~~~--~~~~~~~~~pf~~~~~~sg 382 (675)
T TIGR01497 326 -----VDEKTLADAAQLASLAD----------------DTPEGKSIVILAKQLGIREDD--VQSLHATFVEFTAQTRMSG 382 (675)
T ss_pred -----CcHHHHHHHHHHhcCCC----------------CCcHHHHHHHHHHHcCCCccc--cccccceEEEEcCCCcEEE
Confidence 11234777777775421 235667899887754332211 1234567899999988776
Q ss_pred EEEEcCCCeEEEEEeCChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCC
Q psy6866 562 TVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFS 641 (961)
Q Consensus 562 ~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~ 641 (961)
+.+. ++ ..+.||++|.+++.|.. +|... +..+++.+++++++|.|++++|+
T Consensus 383 ~~~~--~g--~~~~kGa~e~i~~~~~~----~g~~~------~~~~~~~~~~~a~~G~r~l~va~--------------- 433 (675)
T TIGR01497 383 INLD--NG--RMIRKGAVDAIKRHVEA----NGGHI------PTDLDQAVDQVARQGGTPLVVCE--------------- 433 (675)
T ss_pred EEEe--CC--eEEEECCHHHHHHHHHh----cCCCC------cHHHHHHHHHHHhCCCeEEEEEE---------------
Confidence 5443 23 57899999999999862 22221 23466778889999999999983
Q ss_pred CCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccC
Q psy6866 642 TDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKI 721 (961)
Q Consensus 642 ~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~ 721 (961)
|.+++|+++++||+||+++++|++||++|++++|+|||+..+|.++|+++|+..
T Consensus 434 ---------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~----------------- 487 (675)
T TIGR01497 434 ---------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD----------------- 487 (675)
T ss_pred ---------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE-----------------
Confidence 248999999999999999999999999999999999999999999999999953
Q ss_pred CHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecC
Q psy6866 722 TDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDD 801 (961)
Q Consensus 722 ~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~ 801 (961)
+++|++|+||.++|+.+|++|+.|+|+|||.||+|||++|||||||| +|++.++++||++++||
T Consensus 488 ---------------v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd 551 (675)
T TIGR01497 488 ---------------FIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDS 551 (675)
T ss_pred ---------------EEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCC
Confidence 89999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHH
Q psy6866 802 NFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFL 839 (961)
Q Consensus 802 ~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~~ 839 (961)
||++|++++++||+++-+......|.++.++.-.+.++
T Consensus 552 ~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~~~~ 589 (675)
T TIGR01497 552 DPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFAII 589 (675)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHHHHH
Confidence 99999999999999999999999999988776554433
No 22
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.5e-79 Score=717.67 Aligned_cols=505 Identities=27% Similarity=0.370 Sum_probs=428.6
Q ss_pred hhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEE-CCeEEEEECCCcccceEEEecCCCeeeccEEEEe
Q psy6866 201 NLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIR-NGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIE 279 (961)
Q Consensus 201 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R-~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~ 279 (961)
|+..+.++++++.+..+++.+...|+++.++.|.++.|+++++++ ||++++|+.+||+|||+|.|+|||+||+||+|++
T Consensus 173 yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~ 252 (713)
T COG2217 173 YFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe
Confidence 345566677777778888888888999999999999999998877 5669999999999999999999999999999999
Q ss_pred eCCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHH
Q psy6866 280 IQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQE 359 (961)
Q Consensus 280 g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~ 359 (961)
|++ .+|||+|||||.||.|.+|+. +++||.+.+|.....|+++|.+|.+++|.+++++++..++|+|+.
T Consensus 253 G~s-~vDeS~iTGEs~PV~k~~Gd~----------V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrl 321 (713)
T COG2217 253 GSS-SVDESMLTGESLPVEKKPGDE----------VFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRL 321 (713)
T ss_pred CcE-EeecchhhCCCCCEecCCCCE----------EeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHH
Confidence 987 799999999999999999986 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhh
Q psy6866 360 VQHFMRLISMWALTLGAICFLLALYIG-YNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVET 438 (961)
Q Consensus 360 ~~~~~~~l~~i~~~~~~i~~i~~~~~~-~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~ 438 (961)
+++++.++++.+++++++.|++|++.+ .+|...+..++++|+++|||+|.++.|++...+..+.+++|+++|+..++|.
T Consensus 322 aDr~a~~fvp~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~ 401 (713)
T COG2217 322 ADRVASYFVPVVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALER 401 (713)
T ss_pred HHHHHHccHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHh
Confidence 999999999988989988888887666 5888999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCcccccccc
Q psy6866 439 LGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKA 518 (961)
Q Consensus 439 lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~ 518 (961)
++++|+++||||||||+|+|+|+++...+. ..++++..++.... .
T Consensus 402 l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~-------------------~e~~~L~laAalE~------~---------- 446 (713)
T COG2217 402 LAKVDTVVFDKTGTLTEGKPEVTDVVALDG-------------------DEDELLALAAALEQ------H---------- 446 (713)
T ss_pred hccCCEEEEeCCCCCcCCceEEEEEecCCC-------------------CHHHHHHHHHHHHh------c----------
Confidence 999999999999999999999998864321 11234444443321 1
Q ss_pred cCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhhcccccCCcccc
Q psy6866 519 SGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAF 598 (961)
Q Consensus 519 ~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~ 598 (961)
+.+|.-.|+++++...+.. .......+|- +.....+ +| ..+.-|++..+.+.-. .
T Consensus 447 S~HPiA~AIv~~a~~~~~~------~~~~~~~i~G---~Gv~~~v----~g--~~v~vG~~~~~~~~~~----------~ 501 (713)
T COG2217 447 SEHPLAKAIVKAAAERGLP------DVEDFEEIPG---RGVEAEV----DG--ERVLVGNARLLGEEGI----------D 501 (713)
T ss_pred CCChHHHHHHHHHHhcCCC------Cccceeeecc---CcEEEEE----CC--EEEEEcCHHHHhhcCC----------C
Confidence 2234455888876643210 1111233331 1111111 22 3345588877643211 0
Q ss_pred cCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHc
Q psy6866 599 LTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKA 678 (961)
Q Consensus 599 l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~a 678 (961)
.+. ..+..+.+..+|..++.++ .|.+++|+++++|++|++++++|++||+.
T Consensus 502 ~~~-----~~~~~~~~~~~G~t~v~va------------------------~dg~~~g~i~~~D~~R~~a~~aI~~L~~~ 552 (713)
T COG2217 502 LPL-----LSERIEALESEGKTVVFVA------------------------VDGKLVGVIALADELRPDAKEAIAALKAL 552 (713)
T ss_pred ccc-----hhhhHHHHHhcCCeEEEEE------------------------ECCEEEEEEEEeCCCChhHHHHHHHHHHC
Confidence 110 3345667788898877776 34489999999999999999999999999
Q ss_pred CCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCC
Q psy6866 679 GIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDE 758 (961)
Q Consensus 679 gi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~ 758 (961)
|++++|+||||..+|+++|+++||.. ++|.+.|++|.++|+.||++|+
T Consensus 553 Gi~~~mLTGDn~~~A~~iA~~lGId~--------------------------------v~AellPedK~~~V~~l~~~g~ 600 (713)
T COG2217 553 GIKVVMLTGDNRRTAEAIAKELGIDE--------------------------------VRAELLPEDKAEIVRELQAEGR 600 (713)
T ss_pred CCeEEEEcCCCHHHHHHHHHHcChHh--------------------------------heccCCcHHHHHHHHHHHhcCC
Confidence 99999999999999999999999954 8999999999999999999999
Q ss_pred EEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHH
Q psy6866 759 IVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPF 838 (961)
Q Consensus 759 ~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~ 838 (961)
+|+|||||.||+|||++|||||||| +|+|+|+++||++|+++++..++.+++.+|+++++||+|+.|.+.+|.+.+...
T Consensus 601 ~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA 679 (713)
T COG2217 601 KVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLA 679 (713)
T ss_pred EEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 799999999999999999999999999999999999999999999998887543
No 23
>KOG0206|consensus
Probab=100.00 E-value=3.1e-80 Score=745.10 Aligned_cols=748 Identities=21% Similarity=0.270 Sum_probs=582.1
Q ss_pred HHHhcCCCccCCccccchHHHHHHHHHhhH----HHHHHHHHHHHHHHhhhhcccCCCCCCchhhHHHHHHHHHhhHhHH
Q psy6866 143 RLEKDGPNSLPQKYRINNVYVLVGYIFRGF----SALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMF 218 (961)
Q Consensus 143 r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~----~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 218 (961)
+...|-.|.+...| .+++-++.+.++++| ++.+++.++++++.+. + ...+...+++++++.++++.
T Consensus 28 ~~~~~~~N~i~TtK-Yt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~~---~------~~~~~~~~pl~~vl~~t~iK 97 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTK-YTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPLS---P------FNPYTTLVPLLFVLGITAIK 97 (1151)
T ss_pred hhccccCCeeEEEe-ccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCccc---c------cCccceeeceeeeehHHHHH
Confidence 44588899998865 445555556666555 5556666666655411 1 12234456777888888999
Q ss_pred HHHHHHHHHHHHHHHhccCCCeeEEEECCe-EEEEECCCcccceEEEecCCCeeeccEEEEeeCC----ceeeccCcccc
Q psy6866 219 SFYQERKSSHITESFAKMIPTRATVIRNGS-VKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQD----LKAENSSLTGE 293 (961)
Q Consensus 219 ~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~-~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~----l~vdeS~LTGE 293 (961)
+.++.+++.+...++++ .++.|.|++. +++..|++|+|||+|.+..++.+|||.+|+++++ |+|++++|+||
T Consensus 98 d~~eD~rR~~~D~~iN~---~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGE 174 (1151)
T KOG0206|consen 98 DAIEDYRRHKQDKEVNN---RKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGE 174 (1151)
T ss_pred HHHhhhhhhhccHHhhc---ceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCc
Confidence 99999888888777665 4788998644 8999999999999999999999999999999765 99999999999
Q ss_pred ccceeccCCCCC-------------------------------------CccccCcceEeeeeeeeee-ceEEEEEEcCC
Q psy6866 294 VEPVTCTLGATN-------------------------------------SFAVESRNLVFFSTNLVSG-SGKGVVILTGS 335 (961)
Q Consensus 294 s~pv~k~~~~~~-------------------------------------~~~~~~~n~l~~Gt~v~~G-~~~~vV~~tG~ 335 (961)
++.+.|...... ..|+..+|++++|+.+.+. .+.|+|++||+
T Consensus 175 tnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~ 254 (1151)
T KOG0206|consen 175 TNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGH 254 (1151)
T ss_pred cccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCC
Confidence 998877541100 0155667899999999874 58899999999
Q ss_pred cChhhhHHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--------------c-----HHHHHHHH
Q psy6866 336 NTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGY--------------N-----WLNACVYV 396 (961)
Q Consensus 336 ~T~~g~i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~--------------~-----~~~~~~~~ 396 (961)
+| +++.+...++.+++++++..++....+.++.+++++++.+...++.. + ....+..+
T Consensus 255 dt---K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~ 331 (1151)
T KOG0206|consen 255 DT---KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTF 331 (1151)
T ss_pred cc---hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHH
Confidence 99 55556667889999999999999988888777777766655432211 0 01122333
Q ss_pred HHhhhhccCchhHHHHHHHHHHHHHHhh----------cccccccccchhhhccceeEEEecCcCccccCceEEEEEEEc
Q psy6866 397 IGIIVANVPEGLLATLTVSLTLTAKRLA----------SKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFN 466 (961)
Q Consensus 397 i~vlv~~vP~~L~~a~~~~l~~~~~~l~----------k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 466 (961)
+.++...+|.+|++.+.+...+.+..+. ...+.+|+.+..|+||+|++|++|||||||+|.|++.+|.++
T Consensus 332 ~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~ 411 (1151)
T KOG0206|consen 332 IILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSIN 411 (1151)
T ss_pred HhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeeccccc
Confidence 4456677999999999999988885543 346889999999999999999999999999999999999999
Q ss_pred ceeeeecCccc----------------cccccc-------------CCchHHHHHHHHHHHccCceecCCCCCccccccc
Q psy6866 467 REIYHVKNGVD----------------VDIQNF-------------ETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERK 517 (961)
Q Consensus 467 ~~~~~~~~~~~----------------~~~~~~-------------~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~ 517 (961)
+..|....... ..+..+ ........++.+.|+||+...+...+.. ...+
T Consensus 412 g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~--~~~Y 489 (1151)
T KOG0206|consen 412 GTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSG--KLSY 489 (1151)
T ss_pred CcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCcc--ceee
Confidence 88775432210 000011 1223455788999999999877632221 2246
Q ss_pred ccCChhHHHHHHhhcccccch------------hhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHH
Q psy6866 518 ASGDATEVGILHFIQPRIKSI------------QDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMER 585 (961)
Q Consensus 518 ~~g~~~e~all~~~~~~~~~~------------~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~ 585 (961)
...+|+|.|+++.++..+... ......|+.++.++|+|.||||++|++.++|+..+|||||+.+|.++
T Consensus 490 ~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~er 569 (1151)
T KOG0206|consen 490 EAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFER 569 (1151)
T ss_pred ecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhh
Confidence 778999999999988654321 11235788999999999999999999999999999999999999999
Q ss_pred hhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCC---------C-----CCCCCCCCC
Q psy6866 586 CTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFS---------T-----DPMNFPSSG 651 (961)
Q Consensus 586 c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~---------~-----~~~~~~e~~ 651 (961)
+... ....+++-.+++++||.+|+|++|+|+|.+++++|..|.+.. + +..+.+|+|
T Consensus 570 L~~~----------~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~ 639 (1151)
T KOG0206|consen 570 LSKN----------GEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKD 639 (1151)
T ss_pred hhhc----------chHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhc
Confidence 9751 223455667789999999999999999999998876543211 0 112357999
Q ss_pred ceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC-----------------------
Q psy6866 652 FRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS----------------------- 708 (961)
Q Consensus 652 l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~----------------------- 708 (961)
|+++|.+++||+|+++++++|+.|++||||+||+|||..+||.+|+..|+++.++..
T Consensus 640 L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~ 719 (1151)
T KOG0206|consen 640 LILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKE 719 (1151)
T ss_pred chhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHH
Confidence 999999999999999999999999999999999999999999999999999876322
Q ss_pred ---------------------CceeEechhhccCCHH----HHHHHHHhcCceEEeecCHHHHHHHHHHHhh-cCCEEEE
Q psy6866 709 ---------------------DDNVFTGTDLRKITDE----ELKDILETNKELVFARTSPLQKLRIVELYQS-LDEIVAV 762 (961)
Q Consensus 709 ---------------------~~~v~~g~~~~~~~~~----~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~-~g~~V~~ 762 (961)
.++|++|+.+....+. .+..+...|+.+++||++|.||+.+|+..++ .+.++++
T Consensus 720 ~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLA 799 (1151)
T KOG0206|consen 720 TLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLA 799 (1151)
T ss_pred HHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEE
Confidence 3567777776654333 5667778899999999999999999999974 5889999
Q ss_pred EcCCCCCHhhhhhCCeeEeecCCccHh--hhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHHH
Q psy6866 763 TGDGVNDAPALKKADIGIAMGITGSEV--SKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLF 840 (961)
Q Consensus 763 vGDG~ND~~al~~AdvGIamg~~g~~~--a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~~~ 840 (961)
+|||+||++|++.||||| |++|.|. |..+||+.+....|..-. ++.|||+.|.|+.++++|.+++|+...++.++
T Consensus 800 IGDGANDVsMIQ~AhVGV--GIsG~EGmQAvmsSD~AIaqFrfL~rL-LLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fw 876 (1151)
T KOG0206|consen 800 IGDGANDVSMIQEAHVGV--GISGQEGMQAVMSSDFAIAQFRFLERL-LLVHGHWSYIRLAKMILYFFYKNIAFTFTLFW 876 (1151)
T ss_pred eeCCCccchheeeCCcCe--eeccchhhhhhhcccchHHHHHHHhhh-heeecceeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 6677774 777899999988776654 35579999999999999999999999999999
Q ss_pred HHHhcCC---chhHHHHHHHHHHhhhhhhHhhhc-ccC-CCCCcccCCCCCC---CcccccchhhHHHHHHHHHHHHHHH
Q psy6866 841 YIFLGIP---LPVSTVTVLCIDLGTDMWPAVSLA-YEK-PESNIMSREPRNP---RTDHLVGRKLVTYAYFHLGILETLA 912 (961)
Q Consensus 841 ~~~~~~~---~pl~~~q~l~i~li~d~~~~lal~-~e~-~~~~~~~~~P~~~---~~~~~~~~~~~~~~~~~~g~~~~~~ 912 (961)
|.+++.. .....+++.++|++++.+|.++|+ +|+ .+.+.+.+.|..+ +.+..++.+.|+. |...|++++++
T Consensus 877 y~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~-~~~~g~~~sli 955 (1151)
T KOG0206|consen 877 YQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWG-WMLDGFYQSLV 955 (1151)
T ss_pred hhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHH-HHHHHHHhhee
Confidence 9888654 356788999999999999999997 554 4555566666433 2445677777765 34579999999
Q ss_pred HHHHHHHHHh
Q psy6866 913 GFLTYFHVMY 922 (961)
Q Consensus 913 ~~~~~~~~~~ 922 (961)
+|+..+.+++
T Consensus 956 ~Ff~~~~~~~ 965 (1151)
T KOG0206|consen 956 IFFLPYLVFE 965 (1151)
T ss_pred eeeeeHhhhe
Confidence 9977666654
No 24
>KOG0210|consensus
Probab=100.00 E-value=4.2e-78 Score=663.04 Aligned_cols=669 Identities=21% Similarity=0.285 Sum_probs=507.4
Q ss_pred hhHhHHHHHHHHHHHHHHHHHhccCCCeeEEE-ECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCC----ceeec
Q psy6866 213 IVTGMFSFYQERKSSHITESFAKMIPTRATVI-RNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQD----LKAEN 287 (961)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~-R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~----l~vde 287 (961)
++...++.++++++++..+. +..+++ |+|.... ++++|++||+|++..+++||||.+++++++ +.+-+
T Consensus 143 l~keavdd~~r~~rd~~~Ns------e~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRT 215 (1051)
T KOG0210|consen 143 LIKEAVDDLKRRRRDRELNS------EKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRT 215 (1051)
T ss_pred HHHHHHHHHHHHHhhhhhhh------hhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEec
Confidence 33334455555544433322 334444 6775555 999999999999999999999999998654 77888
Q ss_pred cCccccccceeccCCC-------------------------------------CCCccccCcceEeeeeeeeeeceEEEE
Q psy6866 288 SSLTGEVEPVTCTLGA-------------------------------------TNSFAVESRNLVFFSTNLVSGSGKGVV 330 (961)
Q Consensus 288 S~LTGEs~pv~k~~~~-------------------------------------~~~~~~~~~n~l~~Gt~v~~G~~~~vV 330 (961)
-.|+||++...|-+-+ .+..++.-+|.++++|.+.+|.+.|+|
T Consensus 216 DQLDGETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvV 295 (1051)
T KOG0210|consen 216 DQLDGETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVV 295 (1051)
T ss_pred cccCCcccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEE
Confidence 8999999876554310 011245567999999999999999999
Q ss_pred EEcCCcChhhhHHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHH
Q psy6866 331 ILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLA 410 (961)
Q Consensus 331 ~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~ 410 (961)
+|||.+| +-+.+...++.+-..++.++|.+.+++....++++++..... -.+..|...+++++.++...+|.+|-+
T Consensus 296 vYTG~dt---RsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~-g~~~~wyi~~~RfllLFS~IIPISLRv 371 (1051)
T KOG0210|consen 296 VYTGRDT---RSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMK-GFGSDWYIYIIRFLLLFSSIIPISLRV 371 (1051)
T ss_pred EEecccH---HHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhh-cCCCchHHHHHHHHHHHhhhceeEEEE
Confidence 9999999 555566777778888899999999998887777766543322 234678889999999999999999999
Q ss_pred HHHHHHHHHHHHhhcc----cccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCccc---------
Q psy6866 411 TLTVSLTLTAKRLASK----NCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVD--------- 477 (961)
Q Consensus 411 a~~~~l~~~~~~l~k~----~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~--------- 477 (961)
.+.++...-.+.+..+ |.++|+....|+||+++++.+|||||||+|+|.+++++.+...|..+....
T Consensus 372 nlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~ 451 (1051)
T KOG0210|consen 372 NLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLY 451 (1051)
T ss_pred ehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhh
Confidence 9999999999988876 567999999999999999999999999999999999998876665432110
Q ss_pred ----ccccc------cCCchHHHHHHHHHHHccCceecCCCCCcccccccccCChhHHHHHHhhcccccc----------
Q psy6866 478 ----VDIQN------FETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKS---------- 537 (961)
Q Consensus 478 ----~~~~~------~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~---------- 537 (961)
..+.. -+......++..+.++||+..+..+.++ ...++..+|+|+|+++|.+..|..
T Consensus 452 ~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~g---e~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~it 528 (1051)
T KOG0210|consen 452 TPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDG---EVSYQAASPDEVAIVKWTETVGLKLAKRDRHAIT 528 (1051)
T ss_pred CCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCc---eEEeecCCCCeEEEEEeeeecceEEeecccceEE
Confidence 00100 1134556788999999999886655432 235788999999999998754432
Q ss_pred ---hhhHhhcCCeEEEecCCCCCeeEEEEEEcC-CCeEEEEEeCChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHH
Q psy6866 538 ---IQDVRNTFPKVTEVPFNSLNKFHLTVHFSP-LNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKL 613 (961)
Q Consensus 538 ---~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~-~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~ 613 (961)
..+....|+++..|||+|+.|||..+++.+ .+++..|.|||+.++...-. ..+.+++....
T Consensus 529 L~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq---------------~NdWleEE~gN 593 (1051)
T KOG0210|consen 529 LRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQ---------------YNDWLEEECGN 593 (1051)
T ss_pred EecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccc---------------cchhhhhhhhh
Confidence 112234688999999999999999998875 68899999999988744322 22456777889
Q ss_pred HHHhcCceeeEeeeecCCCCCCCC------ccCCCC---------CCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHc
Q psy6866 614 FASKGERVLAFADLHLGQNNFPVN------FKFSTD---------PMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKA 678 (961)
Q Consensus 614 ~a~~G~rvl~~A~~~l~~~~~~~~------~~~~~~---------~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~a 678 (961)
||.+|+|++.+|.|.+++++|..- ...+.. ....+|+||.++|+.|.||+++++++.+++.||+|
T Consensus 594 MAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNA 673 (1051)
T KOG0210|consen 594 MAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNA 673 (1051)
T ss_pred hhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhc
Confidence 999999999999999998766421 011111 11257899999999999999999999999999999
Q ss_pred CCEEEEEcCCCHHHHHHHHHHcCCCCCCCC-------------------------CceeEechhhcc---CCHHHHHHHH
Q psy6866 679 GIRVIMVTGDHPCTAKAIAIKCHILSETSS-------------------------DDNVFTGTDLRK---ITDEELKDIL 730 (961)
Q Consensus 679 gi~v~m~TGD~~~ta~~ia~~~gi~~~~~~-------------------------~~~v~~g~~~~~---~~~~~~~~~~ 730 (961)
||++||+|||+.+||+.+|+..++...+.. .+++++|+.+.- .-++|+.++.
T Consensus 674 gikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~ 753 (1051)
T KOG0210|consen 674 GIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELV 753 (1051)
T ss_pred CcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999875543 267888877653 3467888888
Q ss_pred HhcCceEEeecCHHHHHHHHHHHhhc-CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHh--hhhccceEeecCCchHHH
Q psy6866 731 ETNKELVFARTSPLQKLRIVELYQSL-DEIVAVTGDGVNDAPALKKADIGIAMGITGSEV--SKQTADMILMDDNFASIV 807 (961)
Q Consensus 731 ~~~~~~v~ar~~p~~K~~iv~~l~~~-g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~--a~~aad~vl~~~~~~~i~ 807 (961)
..++.+++|||+|+||+++++.+|+. |..||++|||.||+.|+++||+|| |+.|.|. |.-|||+.+.+ |+.+-
T Consensus 754 ~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~Gi--GI~gkEGkQASLAADfSItq--F~Hv~ 829 (1051)
T KOG0210|consen 754 CELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGI--GIVGKEGKQASLAADFSITQ--FSHVS 829 (1051)
T ss_pred HhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccce--eeecccccccchhccccHHH--HHHHH
Confidence 89999999999999999999999984 899999999999999999999999 6667664 67789999985 55565
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHhcCCchhH---HHHHHHHHHhhhhhhHhhhcccCC-CCCcccC
Q psy6866 808 LGI-EEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVS---TVTVLCIDLGTDMWPAVSLAYEKP-ESNIMSR 882 (961)
Q Consensus 808 ~~i-~~gR~~~~ni~~~i~~~l~~ni~~i~~~~~~~~~~~~~pl~---~~q~l~i~li~d~~~~lal~~e~~-~~~~~~~ 882 (961)
+++ -|||+.|.|-.+..+|.+-..+........+.....+.|.. .+.|+.+..+.+++|.++|..+.- ++.+-..
T Consensus 830 rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~ 909 (1051)
T KOG0210|consen 830 RLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVL 909 (1051)
T ss_pred HHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhh
Confidence 554 46999999999999998876665544444443333333333 344556777888999999998863 4444444
Q ss_pred CCCCCC---cccccchhhHHHHHHHHHHHHHHHHHH
Q psy6866 883 EPRNPR---TDHLVGRKLVTYAYFHLGILETLAGFL 915 (961)
Q Consensus 883 ~P~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~ 915 (961)
.|.-++ .++.++-+.|+. |..+.++++.+.+.
T Consensus 910 yPELYKeL~kgr~lSYKtF~i-wvLISiYQG~vim~ 944 (1051)
T KOG0210|consen 910 YPELYKELTKGRSLSYKTFFI-WVLISIYQGSVIMY 944 (1051)
T ss_pred hHHHHHHHhcCCccchhhhhh-hhhHHHHcccHHHH
Confidence 452211 334455555554 33456666655544
No 25
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=1.3e-74 Score=703.05 Aligned_cols=499 Identities=25% Similarity=0.336 Sum_probs=427.9
Q ss_pred hHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCC
Q psy6866 203 WLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQD 282 (961)
Q Consensus 203 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~ 282 (961)
..+..+++++.++.+++.++++|+++.+++|.++.|.+++|+|||++++|++++|+|||+|+|++||+|||||+|++|+
T Consensus 207 ~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~- 285 (741)
T PRK11033 207 AEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPF- 285 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEECc-
Confidence 3455666777788899999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHHH
Q psy6866 283 LKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQH 362 (961)
Q Consensus 283 l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~ 362 (961)
..||||+|||||.|+.|.+|+. +|+||.+.+|.+++.|+.+|.+|.+|+|.+++++.+.+++|+|+.+++
T Consensus 286 ~~vdes~lTGEs~Pv~k~~Gd~----------V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~ 355 (741)
T PRK11033 286 ASFDESALTGESIPVERATGEK----------VPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDR 355 (741)
T ss_pred EEeecccccCCCCCEecCCCCe----------eccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHH
Confidence 5899999999999999999875 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccc
Q psy6866 363 FMRLISMWALTLGAICFLLA-LYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGS 441 (961)
Q Consensus 363 ~~~~l~~i~~~~~~i~~i~~-~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~ 441 (961)
++.++++++++++++.|++| ++.+.+|...+..++++++++|||+|.++.++++..+..+++|+|+++|+++++|+|++
T Consensus 356 ~a~~~~~~v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~ 435 (741)
T PRK11033 356 FSRIYTPAIMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGR 435 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhC
Confidence 99999999999999888887 44466788889999999999999999999999999999999999999999999999999
Q ss_pred eeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCcccccccccCC
Q psy6866 442 IRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGD 521 (961)
Q Consensus 442 v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~ 521 (961)
+|++|||||||||+|+|+|.+++..+.. ..++++..++..+ ..+.+
T Consensus 436 v~~v~fDKTGTLT~g~~~v~~~~~~~~~------------------~~~~~l~~aa~~e----------------~~s~h 481 (741)
T PRK11033 436 VTTVAFDKTGTLTEGKPQVTDIHPATGI------------------SESELLALAAAVE----------------QGSTH 481 (741)
T ss_pred CCEEEEeCCCCCcCCceEEEEEEecCCC------------------CHHHHHHHHHHHh----------------cCCCC
Confidence 9999999999999999999988643210 1123444443321 11345
Q ss_pred hhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEE--EEEcCCCeEEEEEeCChHHHHHHhhcccccCCccccc
Q psy6866 522 ATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLT--VHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFL 599 (961)
Q Consensus 522 ~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~--v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l 599 (961)
|.+.|+++++...+. .+||.++++.+.. +...-+|.. +.-|+++.+.+ +
T Consensus 482 Pia~Ai~~~a~~~~~-------------~~~~~~~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~--------------~ 532 (741)
T PRK11033 482 PLAQAIVREAQVRGL-------------AIPEAESQRALAGSGIEGQVNGER--VLICAPGKLPP--------------L 532 (741)
T ss_pred HHHHHHHHHHHhcCC-------------CCCCCcceEEEeeEEEEEEECCEE--EEEecchhhhh--------------c
Confidence 777899988764321 2466666655431 222223332 23478777532 1
Q ss_pred CHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcC
Q psy6866 600 TAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAG 679 (961)
Q Consensus 600 ~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~ag 679 (961)
+ ..+.+.++.+..+|++++++|+ |.+++|+++|+|++|++++++|++|++.|
T Consensus 533 ~----~~~~~~~~~~~~~g~~~v~va~------------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~g 584 (741)
T PRK11033 533 A----DAFAGQINELESAGKTVVLVLR------------------------NDDVLGLIALQDTLRADARQAISELKALG 584 (741)
T ss_pred c----HHHHHHHHHHHhCCCEEEEEEE------------------------CCEEEEEEEEecCCchhHHHHHHHHHHCC
Confidence 1 1233446678899999999983 35899999999999999999999999999
Q ss_pred CEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCE
Q psy6866 680 IRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEI 759 (961)
Q Consensus 680 i~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~ 759 (961)
++++|+|||+..+|.++|+++||. .+++..|++|..+|+.+++. +.
T Consensus 585 i~~~llTGd~~~~a~~ia~~lgi~---------------------------------~~~~~~p~~K~~~v~~l~~~-~~ 630 (741)
T PRK11033 585 IKGVMLTGDNPRAAAAIAGELGID---------------------------------FRAGLLPEDKVKAVTELNQH-AP 630 (741)
T ss_pred CEEEEEcCCCHHHHHHHHHHcCCC---------------------------------eecCCCHHHHHHHHHHHhcC-CC
Confidence 999999999999999999999993 56789999999999999965 58
Q ss_pred EEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHH
Q psy6866 760 VAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPF 838 (961)
Q Consensus 760 V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~ 838 (961)
|+|+|||.||+|||++|||||||| +|++.++++||+++.++++..+..++++||+++.||++|+.|.+.+|++.+...
T Consensus 631 v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a 708 (741)
T PRK11033 631 LAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTT 708 (741)
T ss_pred EEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 899999999999999999999999999999999999999999999998766433
No 26
>KOG0209|consensus
Probab=100.00 E-value=2.8e-76 Score=660.12 Aligned_cols=743 Identities=21% Similarity=0.243 Sum_probs=505.7
Q ss_pred cHHHHHHHhhhhccccHHHHHhhccccCccccCCCHHHHHHHhCCCCCCCCCHH-HHHHHHHhcCCCccCCccccchHHH
Q psy6866 85 SKKSILRFIHKEKEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSEL-EVKRRLEKDGPNSLPQKYRINNVYV 163 (961)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~t~~~~GLs~~-~~~~r~~~~G~N~i~~~~~~~~~~~ 163 (961)
+.++..+|+|.+....+..+. .+.++....++.+ +|+..+ ++..-..+||.|..+.+.+ .+-.+
T Consensus 127 F~Fqk~ry~~~~e~~~F~~~~------------fp~~~~~g~~~k~--~G~~~~~~i~~a~~~~G~N~fdi~vP-tF~eL 191 (1160)
T KOG0209|consen 127 FEFQKKRYLYDEEKGKFSRLT------------FPTDEPFGYFQKS--TGHEEESEIKLAKHKYGKNKFDIVVP-TFSEL 191 (1160)
T ss_pred EEEEEeeEEEcccccceeccc------------cCcCCcchhhhhc--cCcchHHHHHHHHHHhcCCccccCCc-cHHHH
Confidence 455777899987555554432 2333344445443 577633 3444444599999887642 34444
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHhhhhcccCCCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhcc--CCCee
Q psy6866 164 LVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKM--IPTRA 241 (961)
Q Consensus 164 ~~~~l~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l--~~~~~ 241 (961)
|.+.-..||..+..++..++.+- ++||+.+.-+++++.-..--.+|+.+. +.+++++ .|..+
T Consensus 192 FkE~A~aPfFVFQVFcvgLWCLD-------------eyWYySlFtLfMli~fE~tlV~Qrm~~---lse~R~Mg~kpy~I 255 (1160)
T KOG0209|consen 192 FKEHAVAPFFVFQVFCVGLWCLD-------------EYWYYSLFTLFMLIAFEATLVKQRMRT---LSEFRTMGNKPYTI 255 (1160)
T ss_pred HHHhccCceeeHhHHhHHHHHhH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhcCCCceEE
Confidence 55443334333333332222211 567776654444443222223444443 4455544 46788
Q ss_pred EEEECCeEEEEECCCcccceEEEecC---CCeeeccEEEEeeCCceeeccCccccccceeccCCCCCC-------ccccC
Q psy6866 242 TVIRNGSVKEIDSAGLVRGDIVLLKI---GDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNS-------FAVES 311 (961)
Q Consensus 242 ~V~R~G~~~~I~~~eLv~GDIV~l~~---Gd~IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~-------~~~~~ 311 (961)
.|+|+++|+.+.++||+|||+|.+.. ...||||.+|+.|++ .||||||||||.|..|.+....+ ...++
T Consensus 256 ~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gsc-iVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k 334 (1160)
T KOG0209|consen 256 NVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGSC-IVNEAMLTGESVPLMKESIELRDSDDILDIDRDDK 334 (1160)
T ss_pred EEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecce-eechhhhcCCCccccccccccCChhhhcccccccc
Confidence 99999999999999999999999977 568999999999875 79999999999999998743211 11234
Q ss_pred cceEeeeeeeee-------------eceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q psy6866 312 RNLVFFSTNLVS-------------GSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAIC 378 (961)
Q Consensus 312 ~n~l~~Gt~v~~-------------G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~ 378 (961)
.+++|.||.+++ |-+.+.|++||++|..|++.+.+-...++-|.-.++.-.|+..+.+++++.+.-+
T Consensus 335 ~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervTaNn~Etf~FILFLlVFAiaAa~Yv 414 (1160)
T KOG0209|consen 335 LHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVTANNRETFIFILFLLVFAIAAAGYV 414 (1160)
T ss_pred eEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecceeeeeccHHHHHHHHHHHHHHHHhhheE
Confidence 578999999884 5578999999999999999988777666666655555444444433333222111
Q ss_pred HHHHHHhh-ccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccceeEEEecCcCccccCc
Q psy6866 379 FLLALYIG-YNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNK 457 (961)
Q Consensus 379 ~i~~~~~~-~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~ 457 (961)
++-..-.. .+-...+.-++-+++..+|+-||+-++++...+...|+|.+++|..|-++.-.|++|++|||||||||+..
T Consensus 415 wv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~ 494 (1160)
T KOG0209|consen 415 WVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDD 494 (1160)
T ss_pred EEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCcccccc
Confidence 00000000 12233455566688888999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCcccccccccCChhHHHHHHhhcccccc
Q psy6866 458 MTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKS 537 (961)
Q Consensus 458 m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~ 537 (961)
|.|.++-.... +.....+..+ .. .+-+.++|.||+...- +...+|||.|.|.++...+....
T Consensus 495 lvv~Gvag~~~----~~~~~~~~s~----~p-~~t~~vlAscHsLv~l---------e~~lVGDPlEKA~l~~v~W~~~k 556 (1160)
T KOG0209|consen 495 LVVEGVAGLSA----DEGALTPASK----AP-NETVLVLASCHSLVLL---------EDKLVGDPLEKATLEAVGWNLEK 556 (1160)
T ss_pred EEEEecccccC----Ccccccchhh----CC-chHHHHHHHHHHHHHh---------cCcccCChHHHHHHHhcCccccc
Confidence 99988753211 0000000000 00 1245677888875432 22478999999999988654322
Q ss_pred hhh------HhhcCCeEEEecCCCCCeeEEEEEEcCC----CeEEEEEeCChHHHHHHhhcccccCCcccccCHHHHHHH
Q psy6866 538 IQD------VRNTFPKVTEVPFNSLNKFHLTVHFSPL----NKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYEL 607 (961)
Q Consensus 538 ~~~------~~~~~~~~~~~~F~s~~k~~~~v~~~~~----~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~~~ 607 (961)
.+. .....++.+.+.|+|.-|||+++..... .++++.+|||||.|.++... .+..+
T Consensus 557 ~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d--------------vP~dY 622 (1160)
T KOG0209|consen 557 KNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD--------------VPKDY 622 (1160)
T ss_pred CcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh--------------CchhH
Confidence 111 1123566889999999999998876522 36899999999999887653 34467
Q ss_pred HHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcC
Q psy6866 608 EDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTG 687 (961)
Q Consensus 608 ~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TG 687 (961)
++...+|+++|.||+|+++|+++.-...+. ..-.++.+|+||+|.|++.|.-|+|+|++++|+.|++++++++|+||
T Consensus 623 ~~iYk~ytR~GsRVLALg~K~l~~~~~~q~---rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITG 699 (1160)
T KOG0209|consen 623 DEIYKRYTRQGSRVLALGYKPLGDMMVSQV---RDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITG 699 (1160)
T ss_pred HHHHHHHhhccceEEEEecccccccchhhh---hhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeC
Confidence 888999999999999999999873211111 12234558999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHcCCCCCCCC--------------------------------------CceeEechhhccCCHH-HHHH
Q psy6866 688 DHPCTAKAIAIKCHILSETSS--------------------------------------DDNVFTGTDLRKITDE-ELKD 728 (961)
Q Consensus 688 D~~~ta~~ia~~~gi~~~~~~--------------------------------------~~~v~~g~~~~~~~~~-~~~~ 728 (961)
||+.||.++|+++||...... .+++++|..+..+... .+.+
T Consensus 700 DnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~ 779 (1160)
T KOG0209|consen 700 DNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRR 779 (1160)
T ss_pred CCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHH
Confidence 999999999999999653100 1445667777665443 4566
Q ss_pred HHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhh----------------
Q psy6866 729 ILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQ---------------- 792 (961)
Q Consensus 729 ~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~---------------- 792 (961)
++.+.. ||||+.|.||..++..|++.|+.++|||||+||++|||+||||||+= ++++.+++
T Consensus 780 l~~hv~--VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL-~~~~e~~~~~~~~~~~k~~~~~~~ 856 (1160)
T KOG0209|consen 780 LIPHVW--VFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALL-NNPEESKKDKEKRRKKKLKLEPAK 856 (1160)
T ss_pred hhhhee--EEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehh-cCChhhhhHHhhhhhhccccCchh
Confidence 666654 99999999999999999999999999999999999999999999985 33221100
Q ss_pred -------------------------------------------------------ccceEeecCCchHHHHHHHHHHHHH
Q psy6866 793 -------------------------------------------------------TADMILMDDNFASIVLGIEEGRLIF 817 (961)
Q Consensus 793 -------------------------------------------------------aad~vl~~~~~~~i~~~i~~gR~~~ 817 (961)
||.+.-.-.+.+++.+.|+.||++.
T Consensus 857 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctL 936 (1160)
T KOG0209|consen 857 QTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTL 936 (1160)
T ss_pred hHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHHHHhcchhH
Confidence 2333333345677889999999998
Q ss_pred HHHHHHHHHHHhhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCCCCCcccCCCCCCCcccccchhh
Q psy6866 818 DNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKL 897 (961)
Q Consensus 818 ~ni~~~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~~ 897 (961)
-+.-+.+.. ++.|.... ......++.-..-++..|.-.--+++. ..-+.+...+|-+.+-+..|. ..++|..+
T Consensus 937 VtTlQMfKI-LALN~Lis-AYslSvlyldGVKfgD~QaTisGlLla-~cFlfISrskPLetLSkeRP~----~nIFN~Y~ 1009 (1160)
T KOG0209|consen 937 VTTLQMFKI-LALNCLIS-AYSLSVLYLDGVKFGDTQATISGLLLA-ACFLFISRSKPLETLSKERPL----PNIFNVYI 1009 (1160)
T ss_pred HHHHHHHHH-HHHHHHHH-HHHHHHhhhcCceecchhHhHHHHHHH-HHHhheecCCchhhHhhcCCC----CCcchHHH
Confidence 887766543 33332221 111122222222345555544444332 234556677787777776664 34566555
Q ss_pred HHHHHHH
Q psy6866 898 VTYAYFH 904 (961)
Q Consensus 898 ~~~~~~~ 904 (961)
+...+.|
T Consensus 1010 i~svl~Q 1016 (1160)
T KOG0209|consen 1010 ILSVLLQ 1016 (1160)
T ss_pred HHHHHHH
Confidence 5544444
No 27
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=3.7e-74 Score=678.00 Aligned_cols=488 Identities=37% Similarity=0.512 Sum_probs=426.0
Q ss_pred HHhhHhHHHHHHHHHHHHHHHHHhc--cCCCeeEEEECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCCceeecc
Q psy6866 211 TCIVTGMFSFYQERKSSHITESFAK--MIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENS 288 (961)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~--l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~l~vdeS 288 (961)
++++..+++.+++++.++..+.+.+ +.|++++|+|+| +++|++++|+|||+|.|++||+|||||+|++|+ +.||||
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~-~~vdes 82 (499)
T TIGR01494 5 LVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGS-CFVDES 82 (499)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEcc-EEEEcc
Confidence 3445567788888888888888888 788999999999 999999999999999999999999999999985 689999
Q ss_pred CccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHHHHH-HHH
Q psy6866 289 SLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFM-RLI 367 (961)
Q Consensus 289 ~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~~~-~~l 367 (961)
+|||||.|+.|.+++. +++|+.+.+|+..+.|+.+|.+|..+++...+......++++++..+++. .++
T Consensus 83 ~LTGEs~pv~k~~g~~----------v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~ 152 (499)
T TIGR01494 83 NLTGESVPVLKTAGDA----------VFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIF 152 (499)
T ss_pred cccCCCCCeeeccCCc----------cccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHH
Confidence 9999999999998865 89999999999999999999999999999998887777899999999998 677
Q ss_pred HHHHHHHHHHHHHHHHHhhc---cHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccceeE
Q psy6866 368 SMWALTLGAICFLLALYIGY---NWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRT 444 (961)
Q Consensus 368 ~~i~~~~~~i~~i~~~~~~~---~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~v~~ 444 (961)
+++.++++++.+++|..... +|...+.+++++++++|||+||+++++++..+..+|+++|+++|+++++|+||++++
T Consensus 153 ~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~ 232 (499)
T TIGR01494 153 ILFVLLIALAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDY 232 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcE
Confidence 77777777777776654433 378899999999999999999999999999999999999999999999999999999
Q ss_pred EEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCcccccccccCChhH
Q psy6866 445 ICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATE 524 (961)
Q Consensus 445 i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e 524 (961)
+|||||||||+|+|+|++++..+. ...+++|.|
T Consensus 233 i~fDKTGTLT~~~~~v~~~~~~~~-----------------------------------------------~~~s~hp~~ 265 (499)
T TIGR01494 233 ICSDKTGTLTKNEMSFKKVSVLGG-----------------------------------------------EYLSGHPDE 265 (499)
T ss_pred EEeeCCCccccCceEEEEEEecCC-----------------------------------------------CcCCCChHH
Confidence 999999999999999998864320 023467888
Q ss_pred HHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhhcccccCCcccccCHHHH
Q psy6866 525 VGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKK 604 (961)
Q Consensus 525 ~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~ 604 (961)
.|+++++... .+...||++.++++++++..+++ .++||+++.+.+.|..
T Consensus 266 ~ai~~~~~~~------------~~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~---------------- 314 (499)
T TIGR01494 266 RALVKSAKWK------------ILNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD---------------- 314 (499)
T ss_pred HHHHHHhhhc------------CcceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH----------------
Confidence 8998887531 23467999999888777765333 4689999999998852
Q ss_pred HHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEE
Q psy6866 605 YELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIM 684 (961)
Q Consensus 605 ~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m 684 (961)
+.+..+.++.+|+|++++|++ .+++|+++++|++|++++++|+.|+++|++++|
T Consensus 315 --~~~~~~~~~~~g~~~~~~a~~------------------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ 368 (499)
T TIGR01494 315 --LEEKVKELAQSGLRVLAVASK------------------------ETLLGLLGLEDPLRDDAKETISELREAGIRVIM 368 (499)
T ss_pred --HHHHHHHHHhCCCEEEEEEEC------------------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEE
Confidence 122344577899999999942 179999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEc
Q psy6866 685 VTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTG 764 (961)
Q Consensus 685 ~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vG 764 (961)
+|||+..+|..+|+++|+ +++++|++|.++|+.+|+.|+.|+|+|
T Consensus 369 ltGD~~~~a~~ia~~lgi-----------------------------------~~~~~p~~K~~~v~~l~~~g~~v~~vG 413 (499)
T TIGR01494 369 LTGDNVLTAKAIAKELGI-----------------------------------FARVTPEEKAALVEALQKKGRVVAMTG 413 (499)
T ss_pred EcCCCHHHHHHHHHHcCc-----------------------------------eeccCHHHHHHHHHHHHHCCCEEEEEC
Confidence 999999999999999986 588999999999999999999999999
Q ss_pred CCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHh
Q psy6866 765 DGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFL 844 (961)
Q Consensus 765 DG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~~~~~~~ 844 (961)
||.||+|||++|||||+|| ++++||++++++++..+..++.+||+++.++++++.|.+++|+..+...+++.+
T Consensus 414 Dg~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~- 486 (499)
T TIGR01494 414 DGVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAV- 486 (499)
T ss_pred CChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 9999999999999999997 689999999999999999999999999999999999999999997655443221
Q ss_pred cCCchhHHHHHHHHHHhhhhhhHhh
Q psy6866 845 GIPLPVSTVTVLCIDLGTDMWPAVS 869 (961)
Q Consensus 845 ~~~~pl~~~q~l~i~li~d~~~~la 869 (961)
+|+++++.++++
T Consensus 487 -------------~~~~~~~~~~~~ 498 (499)
T TIGR01494 487 -------------LNLVPPGLAALA 498 (499)
T ss_pred -------------HHHHhcchhhhc
Confidence 777777776654
No 28
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=4.5e-73 Score=674.67 Aligned_cols=508 Identities=27% Similarity=0.377 Sum_probs=426.0
Q ss_pred hhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECC-eEEEEECCCcccceEEEecCCCeeeccEEEEee
Q psy6866 202 LWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNG-SVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEI 280 (961)
Q Consensus 202 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G-~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g 280 (961)
|..+..++++++++.++++++++|+++.++++.++.|..++|+|+| ++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 18 ~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~g 97 (556)
T TIGR01525 18 VLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISG 97 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEec
Confidence 4456777788888889999999999999999999999999999995 999999999999999999999999999999998
Q ss_pred CCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHH
Q psy6866 281 QDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEV 360 (961)
Q Consensus 281 ~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~ 360 (961)
+ +.||||+|||||.|+.|.+|+. +|+||.+.+|.++++|++||.+|.+|++.+++.....+++|+++.+
T Consensus 98 ~-~~vdes~lTGEs~pv~k~~g~~----------v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~ 166 (556)
T TIGR01525 98 E-SEVDESALTGESMPVEKKEGDE----------VFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLA 166 (556)
T ss_pred c-eEEeehhccCCCCCEecCCcCE----------EeeceEECCceEEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHH
Confidence 7 5899999999999999998864 9999999999999999999999999999999988888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhcc
Q psy6866 361 QHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLG 440 (961)
Q Consensus 361 ~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg 440 (961)
++++.++++++++++++.+++|++.+.+ ..+.+++++++++|||+||+++++++..+.++|+++|+++|+++++|.||
T Consensus 167 ~~~a~~~~~~~l~~a~~~~~~~~~~~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~ 244 (556)
T TIGR01525 167 DRIASYYVPAVLAIALLTFVVWLALGAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLA 244 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCceecCchHHHHhh
Confidence 9999999999988888888887665443 78889999999999999999999999999999999999999999999999
Q ss_pred ceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCcccccccccC
Q psy6866 441 SIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASG 520 (961)
Q Consensus 441 ~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g 520 (961)
++|++|||||||||+|+|+|.+++..+... ...++++..++.+.. ...
T Consensus 245 ~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~----------------~~~~~~l~~a~~~e~----------------~~~ 292 (556)
T TIGR01525 245 KVKTVVFDKTGTLTTGKPTVVDVEPLDDAS----------------ISEEELLALAAALEQ----------------SSS 292 (556)
T ss_pred cCCEEEEeCCCCCcCCceEEEEEEecCCCC----------------ccHHHHHHHHHHHhc----------------cCC
Confidence 999999999999999999999886533210 001234444433321 234
Q ss_pred ChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhhcccccCCcccccC
Q psy6866 521 DATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLT 600 (961)
Q Consensus 521 ~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~ 600 (961)
+|.+.|+++++...+.+... .+ ....+| +..+..+++|+++..+..|+.... ++.. .
T Consensus 293 hp~~~Ai~~~~~~~~~~~~~---~~-~~~~~~---------------~~gi~~~~~g~~~~~lg~~~~~~~-~~~~--~- 349 (556)
T TIGR01525 293 HPLARAIVRYAKKRGLELPK---QE-DVEEVP---------------GKGVEATVDGQEEVRIGNPRLLEL-AAEP--I- 349 (556)
T ss_pred ChHHHHHHHHHHhcCCCccc---cc-CeeEec---------------CCeEEEEECCeeEEEEecHHHHhh-cCCC--c-
Confidence 68889999998754322110 00 111111 112233344444444334432210 1111 1
Q ss_pred HHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcC-
Q psy6866 601 AEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAG- 679 (961)
Q Consensus 601 ~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~ag- 679 (961)
....+.++.++.+|+|++.++ .|.+++|.+.++|++||+++++|+.|+++|
T Consensus 350 ----~~~~~~~~~~~~~g~~~~~v~------------------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~ 401 (556)
T TIGR01525 350 ----SASPDLLNEGESQGKTVVFVA------------------------VDGELLGVIALRDQLRPEAKEAIAALKRAGG 401 (556)
T ss_pred ----hhhHHHHHHHhhCCcEEEEEE------------------------ECCEEEEEEEecccchHhHHHHHHHHHHcCC
Confidence 112344567788999999887 235899999999999999999999999999
Q ss_pred CEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCE
Q psy6866 680 IRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEI 759 (961)
Q Consensus 680 i~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~ 759 (961)
++++|+|||+..++..+++++|+.. +|+++.|++|.++++.+++.++.
T Consensus 402 i~v~ivTgd~~~~a~~i~~~lgi~~--------------------------------~f~~~~p~~K~~~v~~l~~~~~~ 449 (556)
T TIGR01525 402 IKLVMLTGDNRSAAEAVAAELGIDE--------------------------------VHAELLPEDKLAIVKELQEEGGV 449 (556)
T ss_pred CeEEEEeCCCHHHHHHHHHHhCCCe--------------------------------eeccCCHHHHHHHHHHHHHcCCE
Confidence 9999999999999999999999943 89999999999999999999999
Q ss_pred EEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHH
Q psy6866 760 VAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPF 838 (961)
Q Consensus 760 V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~ 838 (961)
|+|+|||.||++|+++||+|++|| ++++.+++.||+++.+++++.+.+++++||+++.|+++++.|++++|++.+...
T Consensus 450 v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a 527 (556)
T TIGR01525 450 VAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLA 527 (556)
T ss_pred EEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 899999999999999999999999999999999999999999999998887543
No 29
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=3.7e-72 Score=662.42 Aligned_cols=487 Identities=27% Similarity=0.378 Sum_probs=413.3
Q ss_pred hhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeC
Q psy6866 202 LWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQ 281 (961)
Q Consensus 202 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~ 281 (961)
|+.+.+++++++++.+++.++++|+++.++++.++.|++++|+|||+++++++++|+|||+|.|++||+|||||+|++|+
T Consensus 18 ~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~g~ 97 (536)
T TIGR01512 18 YLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGT 97 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEEEcCCCEeecceEEEeCc
Confidence 45566677777888899999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHH
Q psy6866 282 DLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQ 361 (961)
Q Consensus 282 ~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~ 361 (961)
. .||||+|||||.|+.|++|+. +|+||.+.+|.++++|++||.+|.+|++.+++.....+++|+++.++
T Consensus 98 ~-~vdes~lTGEs~pv~k~~g~~----------v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~ 166 (536)
T TIGR01512 98 S-TVDESALTGESVPVEKAPGDE----------VFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFID 166 (536)
T ss_pred E-EEEecccCCCCCcEEeCCCCE----------EEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHH
Confidence 4 899999999999999998864 99999999999999999999999999999999888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccc
Q psy6866 362 HFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGS 441 (961)
Q Consensus 362 ~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~ 441 (961)
+++.++++++++++++.++++++.+. +...+.+++++++++|||+||+++++++..+..+|+++|+++|+++++|++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~ 245 (536)
T TIGR01512 167 RFARYYTPVVLAIALAIWLVPGLLKR-WPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAK 245 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcC
Confidence 99999999988888887777765433 33477888999999999999999999999999999999999999999999999
Q ss_pred eeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCcccccccccCC
Q psy6866 442 IRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGD 521 (961)
Q Consensus 442 v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~ 521 (961)
+|++|||||||||+|+|+|.+++.. +++..++.+. ....+
T Consensus 246 v~~i~fDKTGTLT~~~~~v~~~~~~------------------------~~l~~a~~~e----------------~~~~h 285 (536)
T TIGR01512 246 IKTVAFDKTGTLTTGRPKVVDVVPA------------------------EVLRLAAAAE----------------QASSH 285 (536)
T ss_pred CCEEEECCCCCCcCCceEEEEeeHH------------------------HHHHHHHHHh----------------ccCCC
Confidence 9999999999999999999887421 2444444321 11345
Q ss_pred hhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhhcccccCCcccccCH
Q psy6866 522 ATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTA 601 (961)
Q Consensus 522 ~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~ 601 (961)
|.+.|+++++.... .+.....+|. +... .. -+|.. +..|+++.+.+. +
T Consensus 286 p~~~Ai~~~~~~~~--------~~~~~~~~~g---~gi~-~~---~~g~~--~~ig~~~~~~~~--------~------- 333 (536)
T TIGR01512 286 PLARAIVDYARKRE--------NVESVEEVPG---EGVR-AV---VDGGE--VRIGNPRSLEAA--------V------- 333 (536)
T ss_pred cHHHHHHHHHHhcC--------CCcceEEecC---CeEE-EE---ECCeE--EEEcCHHHHhhc--------C-------
Confidence 77889988876431 1122223332 1111 11 12222 234776544221 0
Q ss_pred HHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCC-
Q psy6866 602 EKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGI- 680 (961)
Q Consensus 602 ~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi- 680 (961)
...+..+|.+++.++ .|.+++|.+.++|++||+++++|+.|+++|+
T Consensus 334 ---------~~~~~~~~~~~~~v~------------------------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~ 380 (536)
T TIGR01512 334 ---------GARPESAGKTIVHVA------------------------RDGTYLGYILLSDEPRPDAAEAIAELKALGIE 380 (536)
T ss_pred ---------CcchhhCCCeEEEEE------------------------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCC
Confidence 003445676665554 3568999999999999999999999999999
Q ss_pred EEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEE
Q psy6866 681 RVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIV 760 (961)
Q Consensus 681 ~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V 760 (961)
+++|+|||+..++..+++++|+.. +|++..|++|..+++.+++.++.|
T Consensus 381 ~v~vvTgd~~~~a~~i~~~lgi~~--------------------------------~f~~~~p~~K~~~i~~l~~~~~~v 428 (536)
T TIGR01512 381 KVVMLTGDRRAVAERVARELGIDE--------------------------------VHAELLPEDKLEIVKELREKYGPV 428 (536)
T ss_pred cEEEEcCCCHHHHHHHHHHcCChh--------------------------------hhhccCcHHHHHHHHHHHhcCCEE
Confidence 999999999999999999999954 789999999999999999999999
Q ss_pred EEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHH
Q psy6866 761 AVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILP 837 (961)
Q Consensus 761 ~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~ 837 (961)
+|+|||.||++|+++||+||+||.++++.++++||+++.++++..+.+++.+||++++|+++++.|++.+|++.+..
T Consensus 429 ~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~ 505 (536)
T TIGR01512 429 AMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILL 505 (536)
T ss_pred EEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999668999999999999999999999999999999999999999999999877654
No 30
>KOG0207|consensus
Probab=100.00 E-value=3.7e-73 Score=651.43 Aligned_cols=552 Identities=24% Similarity=0.334 Sum_probs=439.1
Q ss_pred chhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCe-EEEEECCCcccceEEEecCCCeeeccEEEE
Q psy6866 200 DNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGS-VKEIDSAGLVRGDIVLLKIGDKVPADIRLI 278 (961)
Q Consensus 200 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~-~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill 278 (961)
+++-....++.++.+.-+++-..+.|+...+..|.++.|..+.++.+|+ +++|+.+.|++||+|.|.||++||+||+++
T Consensus 339 tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv 418 (951)
T KOG0207|consen 339 TFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVV 418 (951)
T ss_pred hhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEE
Confidence 3444444555555666677777777888889999999999999999997 889999999999999999999999999999
Q ss_pred eeCCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHH
Q psy6866 279 EIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQ 358 (961)
Q Consensus 279 ~g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~ 358 (961)
+|++ .||||++|||++||.|++|+. +.+||...+|.....++.+|.+|.+++|.+++++++..++|+|+
T Consensus 419 ~Gss-~VDEs~iTGEs~PV~Kk~gs~----------ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq 487 (951)
T KOG0207|consen 419 DGSS-EVDESLITGESMPVPKKKGST----------VIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQ 487 (951)
T ss_pred eCce-eechhhccCCceecccCCCCe----------eeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHH
Confidence 9986 899999999999999999986 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----------cHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhccc
Q psy6866 359 EVQHFMRLISMWALTLGAICFLLALYIGY-----------NWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKN 427 (961)
Q Consensus 359 ~~~~~~~~l~~i~~~~~~i~~i~~~~~~~-----------~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ 427 (961)
.+|+++.+++++++++++..|++|.+.+. .+...+.+++++++++|||+|.++.|++...+....+++|
T Consensus 488 ~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nG 567 (951)
T KOG0207|consen 488 LADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNG 567 (951)
T ss_pred HHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcc
Confidence 99999999999999999999999987653 2345667889999999999999999999999999999999
Q ss_pred ccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCC
Q psy6866 428 CIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPN 507 (961)
Q Consensus 428 ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~ 507 (961)
+|+|..+.+|.+.++++++||||||||+|+++|+++....+. -..++++...+....
T Consensus 568 vLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~-----------------~~~~e~l~~v~a~Es------ 624 (951)
T KOG0207|consen 568 VLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP-----------------ISLKEALALVAAMES------ 624 (951)
T ss_pred eEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc-----------------ccHHHHHHHHHHHhc------
Confidence 999999999999999999999999999999999988654321 112233333322211
Q ss_pred CCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhh
Q psy6866 508 QDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCT 587 (961)
Q Consensus 508 ~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~ 587 (961)
...|| .-.|+++|+........ .-.....-.|..+... ..+.. .+.+ .+-|.-+.+..
T Consensus 625 ~SeHP----------ig~AIv~yak~~~~~~~----~~~~~~~~~~pg~g~~-~~~~~-~~~~---i~iGN~~~~~r--- 682 (951)
T KOG0207|consen 625 GSEHP----------IGKAIVDYAKEKLVEPN----PEGVLSFEYFPGEGIY-VTVTV-DGNE---VLIGNKEWMSR--- 682 (951)
T ss_pred CCcCc----------hHHHHHHHHHhcccccC----ccccceeecccCCCcc-cceEE-eeeE---EeechHHHHHh---
Confidence 11234 44589999875431100 0001111122222211 11111 1111 34477666543
Q ss_pred cccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCC
Q psy6866 588 TMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPA 667 (961)
Q Consensus 588 ~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~ 667 (961)
+|... .+.+++.++.....|..+..++ .|.+++|++.++|++|+|
T Consensus 683 -----~~~~~------~~~i~~~~~~~e~~g~tvv~v~------------------------vn~~l~gv~~l~D~vr~~ 727 (951)
T KOG0207|consen 683 -----NGCSI------PDDILDALTESERKGQTVVYVA------------------------VNGQLVGVFALEDQVRPD 727 (951)
T ss_pred -----cCCCC------chhHHHhhhhHhhcCceEEEEE------------------------ECCEEEEEEEeccccchh
Confidence 22221 1235666777778899888887 345899999999999999
Q ss_pred hHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHH
Q psy6866 668 VPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKL 747 (961)
Q Consensus 668 ~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~ 747 (961)
+..+|+.||+.|++++|+||||..+|+++|+++|+.. |||...|+||.
T Consensus 728 a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~--------------------------------V~aev~P~~K~ 775 (951)
T KOG0207|consen 728 AALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN--------------------------------VYAEVLPEQKA 775 (951)
T ss_pred HHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce--------------------------------EEeccCchhhH
Confidence 9999999999999999999999999999999999643 99999999999
Q ss_pred HHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHH
Q psy6866 748 RIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYI 827 (961)
Q Consensus 748 ~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~ 827 (961)
++|+.+|+++..|+|||||+||+|||.+|||||+|| .|+++|.++||+||+.+|+..++.+++.+|++..|||.|+.|.
T Consensus 776 ~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A 854 (951)
T KOG0207|consen 776 EKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWA 854 (951)
T ss_pred HHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeec-cccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHH
Confidence 999999999999999999999999999999999999 8899999999999999999999999999999999999999999
Q ss_pred HhhhHhhHHHHHHHHHhcCC---chhHHHHHHHHHHhhhhhhHhhhc-ccCCC
Q psy6866 828 LASNIPEILPFLFYIFLGIP---LPVSTVTVLCIDLGTDMWPAVSLA-YEKPE 876 (961)
Q Consensus 828 l~~ni~~i~~~~~~~~~~~~---~pl~~~q~l~i~li~d~~~~lal~-~e~~~ 876 (961)
++||++.+.+ ....|+.++ .|.-+...+..+-+.-.+-++-|- +.+|.
T Consensus 855 ~~yn~~~IpI-AagvF~P~~~~L~Pw~A~lama~SSvsVv~sSllLk~~k~p~ 906 (951)
T KOG0207|consen 855 LIYNLVGIPI-AAGVFAPFGIVLPPWMASLAMAASSVSVVLSSLLLKRYKKPT 906 (951)
T ss_pred HHHHHhhhhh-heecccCCccccCchHHHHHHHhhhHHHhhhHHHHhhccccc
Confidence 9999988643 233344433 333333333444444444455554 34454
No 31
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=2.7e-70 Score=678.90 Aligned_cols=501 Identities=26% Similarity=0.322 Sum_probs=422.4
Q ss_pred HHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCCce
Q psy6866 205 GIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLK 284 (961)
Q Consensus 205 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~l~ 284 (961)
+..+++++.+..+++.+.+.|+++.+++|.++.|++++++|+|++++|+.++|+|||+|.|++||+|||||+|++|+ ..
T Consensus 289 ~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~-~~ 367 (834)
T PRK10671 289 SAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGE-AW 367 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEce-EE
Confidence 55666677777788888888999999999999999999999999999999999999999999999999999999986 58
Q ss_pred eeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHHHHH
Q psy6866 285 AENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFM 364 (961)
Q Consensus 285 vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~~~ 364 (961)
||||+|||||.|+.|.+|+. +|+||.+.+|.+.+.|+++|.+|.+|+|.+++++.+..++|+++.+++++
T Consensus 368 vdeS~lTGEs~pv~k~~gd~----------V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a 437 (834)
T PRK10671 368 LDEAMLTGEPIPQQKGEGDS----------VHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKIS 437 (834)
T ss_pred EeehhhcCCCCCEecCCCCE----------EEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 99999999999999999975 99999999999999999999999999999999998888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcc--HHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccce
Q psy6866 365 RLISMWALTLGAICFLLALYIGYN--WLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSI 442 (961)
Q Consensus 365 ~~l~~i~~~~~~i~~i~~~~~~~~--~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~v 442 (961)
.++++++++++++.+++|++.+.. |...+.+++++++++|||+|++++++++..+..+++++|+++|+++++|+||++
T Consensus 438 ~~~v~~v~~~a~~~~~~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v 517 (834)
T PRK10671 438 AVFVPVVVVIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTL 517 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCC
Confidence 999999888888888888665433 566788899999999999999999999999999999999999999999999999
Q ss_pred eEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCcccccccccCCh
Q psy6866 443 RTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDA 522 (961)
Q Consensus 443 ~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~ 522 (961)
|++|||||||||+|+|+|.++...+.. ...+.+..+++++.. +.+|
T Consensus 518 ~~v~fDKTGTLT~g~~~v~~~~~~~~~-----------------~~~~~l~~a~~~e~~-----------------s~hp 563 (834)
T PRK10671 518 DTLVFDKTGTLTEGKPQVVAVKTFNGV-----------------DEAQALRLAAALEQG-----------------SSHP 563 (834)
T ss_pred CEEEEcCCCccccCceEEEEEEccCCC-----------------CHHHHHHHHHHHhCC-----------------CCCH
Confidence 999999999999999999887532210 011122233334321 2356
Q ss_pred hHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhhcccccCCcccccCHH
Q psy6866 523 TEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAE 602 (961)
Q Consensus 523 ~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~ 602 (961)
.+.|+++++... .. .. ..+|......-.... .+|. .+.+|+++.+.+.. +.
T Consensus 564 ~a~Ai~~~~~~~--~~-------~~--~~~~~~~~g~Gv~~~--~~g~--~~~~G~~~~~~~~~------------~~-- 614 (834)
T PRK10671 564 LARAILDKAGDM--TL-------PQ--VNGFRTLRGLGVSGE--AEGH--ALLLGNQALLNEQQ------------VD-- 614 (834)
T ss_pred HHHHHHHHHhhC--CC-------CC--cccceEecceEEEEE--ECCE--EEEEeCHHHHHHcC------------CC--
Confidence 777888776421 10 00 112221111111111 1232 34569998764311 11
Q ss_pred HHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEE
Q psy6866 603 KKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRV 682 (961)
Q Consensus 603 ~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v 682 (961)
+..+.+.++.+..+|.+++.+++ |.+++|++.+.|++||+++++|+.|++.|+++
T Consensus 615 -~~~~~~~~~~~~~~g~~~v~va~------------------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v 669 (834)
T PRK10671 615 -TKALEAEITAQASQGATPVLLAV------------------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRL 669 (834)
T ss_pred -hHHHHHHHHHHHhCCCeEEEEEE------------------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeE
Confidence 12345556778889999988873 34789999999999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEE
Q psy6866 683 IMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAV 762 (961)
Q Consensus 683 ~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~ 762 (961)
+|+|||+..++..+++++||.. +|++..|++|.++++.++.+++.|+|
T Consensus 670 ~~~Tgd~~~~a~~ia~~lgi~~--------------------------------~~~~~~p~~K~~~i~~l~~~~~~v~~ 717 (834)
T PRK10671 670 VMLTGDNPTTANAIAKEAGIDE--------------------------------VIAGVLPDGKAEAIKRLQSQGRQVAM 717 (834)
T ss_pred EEEcCCCHHHHHHHHHHcCCCE--------------------------------EEeCCCHHHHHHHHHHHhhcCCEEEE
Confidence 9999999999999999999953 89999999999999999999999999
Q ss_pred EcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHH
Q psy6866 763 TGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILP 837 (961)
Q Consensus 763 vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~ 837 (961)
+|||.||++|+++||+||+|| +|++.++++||++++++++.+|..++++||+++.+|++|+.|.+.+|++.+..
T Consensus 718 vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~ 791 (834)
T PRK10671 718 VGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPI 791 (834)
T ss_pred EeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 89999999999999999999999999999999999999999999999888643
No 32
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=2.1e-70 Score=649.39 Aligned_cols=492 Identities=25% Similarity=0.352 Sum_probs=408.9
Q ss_pred hhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEEC-CeEEEEECCCcccceEEEecCCCeeeccEEEEe
Q psy6866 201 NLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRN-GSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIE 279 (961)
Q Consensus 201 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~-G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~ 279 (961)
++..+.++++++.++.+++.+.++|+++.+++|.++.|.+++++|+ |++++|+.++|+|||+|.|++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 3344445566666677888888889999999999999999999985 667999999999999999999999999999999
Q ss_pred eCCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHH
Q psy6866 280 IQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQE 359 (961)
Q Consensus 280 g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~ 359 (961)
|+. .||||+|||||.|+.|.+|+. +|+||.+.+|.+.++|+++|.+|.+|+|.+++.+.+.+++|+++.
T Consensus 133 g~~-~vdes~lTGEs~pv~k~~gd~----------V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~ 201 (562)
T TIGR01511 133 GES-EVDESLVTGESLPVPKKVGDP----------VIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRL 201 (562)
T ss_pred Cce-EEehHhhcCCCCcEEcCCCCE----------EEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHH
Confidence 875 899999999999999999875 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhc
Q psy6866 360 VQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETL 439 (961)
Q Consensus 360 ~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~l 439 (961)
+++++.++++++++++++.+++|. ..+.+++++++++|||+|++++++++..+..+++++|+++|+++++|.|
T Consensus 202 ~d~~a~~~~~~v~~~a~~~~~~~~-------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l 274 (562)
T TIGR01511 202 ADKVAGYFVPVVIAIALITFVIWL-------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERA 274 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHh
Confidence 999999999988888877776553 4788899999999999999999999999999999999999999999999
Q ss_pred cceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCccccccccc
Q psy6866 440 GSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKAS 519 (961)
Q Consensus 440 g~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~ 519 (961)
+++|++|||||||||+|+|+|.++...+.. ..++++..++.... .+
T Consensus 275 ~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~------------------~~~~~l~~aa~~e~----------------~s 320 (562)
T TIGR01511 275 ANIDTVVFDKTGTLTQGKPTVTDVHVFGDR------------------DRTELLALAAALEA----------------GS 320 (562)
T ss_pred hCCCEEEECCCCCCcCCCEEEEEEecCCCC------------------CHHHHHHHHHHHhc----------------cC
Confidence 999999999999999999999988643211 01234444332211 12
Q ss_pred CChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhhcccccCCccccc
Q psy6866 520 GDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFL 599 (961)
Q Consensus 520 g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l 599 (961)
.+|.+.|+++++...+.... .......+|- +.... . -++ .-+..|+++.+.+. +.. +
T Consensus 321 ~HPia~Ai~~~~~~~~~~~~----~~~~~~~~~g---~Gi~~-~---~~g--~~~~iG~~~~~~~~--------~~~--~ 377 (562)
T TIGR01511 321 EHPLAKAIVSYAKEKGITLV----EVSDFKAIPG---IGVEG-T---VEG--TKIQLGNEKLLGEN--------AIK--I 377 (562)
T ss_pred CChHHHHHHHHHHhcCCCcC----CCCCeEEECC---ceEEE-E---ECC--EEEEEECHHHHHhC--------CCC--C
Confidence 34677799888764322111 0111222221 11111 1 122 22456888765321 110 1
Q ss_pred CHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcC
Q psy6866 600 TAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAG 679 (961)
Q Consensus 600 ~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~ag 679 (961)
+ .+..+|.+++.++ .|.+++|++.++|++||+++++|++|++.|
T Consensus 378 ~------------~~~~~g~~~~~~~------------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~G 421 (562)
T TIGR01511 378 D------------GKAEQGSTSVLVA------------------------VNGELAGVFALEDQLRPEAKEVIQALKRRG 421 (562)
T ss_pred C------------hhhhCCCEEEEEE------------------------ECCEEEEEEEecccccHHHHHHHHHHHHcC
Confidence 1 1235788877765 456899999999999999999999999999
Q ss_pred CEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCE
Q psy6866 680 IRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEI 759 (961)
Q Consensus 680 i~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~ 759 (961)
++++|+|||+..++..+++++|+. +|++..|++|.++++.+++.++.
T Consensus 422 i~v~ilSgd~~~~a~~ia~~lgi~---------------------------------~~~~~~p~~K~~~v~~l~~~~~~ 468 (562)
T TIGR01511 422 IEPVMLTGDNRKTAKAVAKELGIN---------------------------------VRAEVLPDDKAALIKELQEKGRV 468 (562)
T ss_pred CeEEEEcCCCHHHHHHHHHHcCCc---------------------------------EEccCChHHHHHHHHHHHHcCCE
Confidence 999999999999999999999992 68899999999999999999999
Q ss_pred EEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHH
Q psy6866 760 VAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILP 837 (961)
Q Consensus 760 V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~ 837 (961)
|+|+|||.||++|+++||+||+|| .|++.++++||+++.++++..+..++++||+++++|++++.|++.+|++.+..
T Consensus 469 v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~l 545 (562)
T TIGR01511 469 VAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPI 545 (562)
T ss_pred EEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 89999999999999999999999999999999999999999999999987643
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.4e-60 Score=507.57 Aligned_cols=495 Identities=26% Similarity=0.357 Sum_probs=383.3
Q ss_pred HHHHHhhHhHHHHHHHHHHHHHHHHHhccC-CCeeEEEEC-CeEEEEECCCcccceEEEecCCCeeeccEEEEeeCCcee
Q psy6866 208 LALTCIVTGMFSFYQERKSSHITESFAKMI-PTRATVIRN-GSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKA 285 (961)
Q Consensus 208 i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~V~R~-G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~l~v 285 (961)
+.+.+++..+-+.+.|-|.+...+.|++.. ...++++++ |.++.+++.+|..||+|.|+.||.||+||.+++|.. .|
T Consensus 72 L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sV 150 (681)
T COG2216 72 LWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SV 150 (681)
T ss_pred HHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ec
Confidence 444444445556666666555555665543 235667765 899999999999999999999999999999999986 89
Q ss_pred eccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHHHHHH
Q psy6866 286 ENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMR 365 (961)
Q Consensus 286 deS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~~~~ 365 (961)
|||.+||||-||.|.+|.... -+--||.+++.+.+..+++.-.+|.+.|+..+++.+..++||-+-.+.-+..
T Consensus 151 dESAITGESaPViresGgD~s-------sVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~ 223 (681)
T COG2216 151 DESAITGESAPVIRESGGDFS-------SVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLS 223 (681)
T ss_pred chhhccCCCcceeeccCCCcc-------cccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHH
Confidence 999999999999999884321 2678999999999999999999999999999999999999998877766655
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccceeEE
Q psy6866 366 LISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTI 445 (961)
Q Consensus 366 ~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~v~~i 445 (961)
-+.++.+++....+-+..+.+ .-...+...++++++.+|-....-++..=..++.|+.+.|++-++..++|.+|.+|++
T Consensus 224 ~LTliFL~~~~Tl~p~a~y~~-g~~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtl 302 (681)
T COG2216 224 GLTLIFLLAVATLYPFAIYSG-GGAASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTL 302 (681)
T ss_pred HHHHHHHHHHHhhhhHHHHcC-CCCcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEE
Confidence 554443332222222222221 1113345667889999998887666666666999999999999999999999999999
Q ss_pred EecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCcccccccccCChhHH
Q psy6866 446 CTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEV 525 (961)
Q Consensus 446 ~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e~ 525 (961)
..|||||+|-|+=.-.+++..+ ..+.+++..++.+++-+.-.++ -.
T Consensus 303 iLDKTGTIT~GnR~A~~f~p~~------------------gv~~~~la~aa~lsSl~DeTpE----------------Gr 348 (681)
T COG2216 303 LLDKTGTITLGNRQASEFIPVP------------------GVSEEELADAAQLASLADETPE----------------GR 348 (681)
T ss_pred EecccCceeecchhhhheecCC------------------CCCHHHHHHHHHHhhhccCCCC----------------cc
Confidence 9999999998865444433221 1233557777777654321111 12
Q ss_pred HHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhhcccccCCcccccCHHHHH
Q psy6866 526 GILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKY 605 (961)
Q Consensus 526 all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~ 605 (961)
+++..+++.+...+..... .....+||+.+.+++.+-. +++ .-+-|||.+.|.++.+. .+.. .+.
T Consensus 349 SIV~LA~~~~~~~~~~~~~-~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~----~~g~------~p~ 413 (681)
T COG2216 349 SIVELAKKLGIELREDDLQ-SHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRE----RGGH------IPE 413 (681)
T ss_pred cHHHHHHHhccCCCccccc-ccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHh----cCCC------CCH
Confidence 4555555443222211110 1346789998887654433 223 55679999999887652 2221 234
Q ss_pred HHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEE
Q psy6866 606 ELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMV 685 (961)
Q Consensus 606 ~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~ 685 (961)
.++...++.++.|-..++++ .|-+++|++.++|-+||+.+|-+++||+.||+++|+
T Consensus 414 ~l~~~~~~vs~~GGTPL~V~------------------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~ 469 (681)
T COG2216 414 DLDAAVDEVSRLGGTPLVVV------------------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMI 469 (681)
T ss_pred HHHHHHHHHHhcCCCceEEE------------------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEE
Confidence 56777888899999998887 345899999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcC
Q psy6866 686 TGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGD 765 (961)
Q Consensus 686 TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGD 765 (961)
||||+.||..||++.|++. ..|.++|++|.++|+.-|..|+.|+||||
T Consensus 470 TGDN~~TAa~IA~EAGVDd--------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGD 517 (681)
T COG2216 470 TGDNPLTAAAIAAEAGVDD--------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGD 517 (681)
T ss_pred eCCCHHHHHHHHHHhCchh--------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCC
Confidence 9999999999999999965 78999999999999999999999999999
Q ss_pred CCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHH
Q psy6866 766 GVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIF 817 (961)
Q Consensus 766 G~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~ 817 (961)
|+||+|||.+||||+||. +|++.|||++++|=+|.|...+.+.++.|+...
T Consensus 518 GTNDAPALAqAdVg~AMN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlL 568 (681)
T COG2216 518 GTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLL 568 (681)
T ss_pred CCCcchhhhhcchhhhhc-cccHHHHHhhcccccCCCccceehHhhhhhhhe
Confidence 999999999999999998 999999999999999999999999999998763
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=2.4e-35 Score=313.55 Aligned_cols=226 Identities=32% Similarity=0.576 Sum_probs=201.6
Q ss_pred HHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCe-eEEEECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCCceee
Q psy6866 208 LALTCIVTGMFSFYQERKSSHITESFAKMIPTR-ATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAE 286 (961)
Q Consensus 208 i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~-~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~l~vd 286 (961)
++++++++.++++++++++++..++++++.+++ ++|+|||++++++++||+|||||.|++||.+||||+|++.+.+.||
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~vd 81 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAYVD 81 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccccccc
Confidence 445666677889999999999999999988887 9999999999999999999999999999999999999995567999
Q ss_pred ccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHHHHHHH
Q psy6866 287 NSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRL 366 (961)
Q Consensus 287 eS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~~~~~ 366 (961)
||.+|||+.|+.|.+. +.+.+|++|+||.+.+|++.++|++||.+|..|++.+.....+.+++++++.++++..+
T Consensus 82 ~s~ltGes~pv~k~~~-----~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (230)
T PF00122_consen 82 ESALTGESEPVKKTPL-----PLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKI 156 (230)
T ss_dssp CHHHHSBSSEEEESSS-----CCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHH
T ss_pred cccccccccccccccc-----cccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHH
Confidence 9999999999999855 45567889999999999999999999999999999998888888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH--hhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhh
Q psy6866 367 ISMWALTLGAICFLLALY--IGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVET 438 (961)
Q Consensus 367 l~~i~~~~~~i~~i~~~~--~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~ 438 (961)
+.++++++++++++++++ ...+|...+..++++++++||++||+++++++.+++++|.++|+++|+++++|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 157 LIIIILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred HHhcccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 998888888887777666 567788999999999999999999999999999999999999999999999995
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.86 E-value=4.9e-22 Score=208.85 Aligned_cols=97 Identities=46% Similarity=0.692 Sum_probs=91.3
Q ss_pred CceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHH
Q psy6866 651 GFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDIL 730 (961)
Q Consensus 651 ~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~ 730 (961)
+++++|.+.+.|++|++++++|+.|+++|++++|+|||+..++..+++++||..
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------- 168 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------- 168 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS--------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc--------------------------
Confidence 569999999999999999999999999999999999999999999999999943
Q ss_pred HhcCceEEeec--CHHHH--HHHHHHHhhcCCEEEEEcCCCCCHhhhhhCC
Q psy6866 731 ETNKELVFART--SPLQK--LRIVELYQSLDEIVAVTGDGVNDAPALKKAD 777 (961)
Q Consensus 731 ~~~~~~v~ar~--~p~~K--~~iv~~l~~~g~~V~~vGDG~ND~~al~~Ad 777 (961)
..+|+++ +|++| .++++.|+..++.|+|+|||.||++|+++||
T Consensus 169 ----~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 169 ----SIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp ----EEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred ----ccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 2499999 99999 9999999976779999999999999999997
No 36
>KOG4383|consensus
Probab=99.80 E-value=8.5e-17 Score=178.43 Aligned_cols=303 Identities=19% Similarity=0.218 Sum_probs=210.7
Q ss_pred CChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCC--------C--CC---C--------
Q psy6866 577 GAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQ--------N--NF---P-------- 635 (961)
Q Consensus 577 Ga~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~--------~--~~---~-------- 635 (961)
|-.+.+.+.|+.+++ +....|++...+.++.+.+.+-...|+ ++++|||+.-. + +. +
T Consensus 698 g~ad~~~eACTdfWd-Gadi~PlSg~dkkkV~DFY~RaclsG~-C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWD-GADIIPLSGRDKKKVKDFYLRACLSGH-CLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcC-CceeeecCcchHHHHHHHHHHHhhccc-chheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 555678889999887 667789999899888888888777776 68899886210 0 00 0
Q ss_pred ----CCc--------cCCCC-----------CCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHH
Q psy6866 636 ----VNF--------KFSTD-----------PMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCT 692 (961)
Q Consensus 636 ----~~~--------~~~~~-----------~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~t 692 (961)
... .++.. +....-++..|.|++.+..+.+++....|+.|-++-|+.+..|-++...
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 000 00000 0011225678999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCcee---------------------------------EechhhccCCHHH--------------
Q psy6866 693 AKAIAIKCHILSETSSDDNV---------------------------------FTGTDLRKITDEE-------------- 725 (961)
Q Consensus 693 a~~ia~~~gi~~~~~~~~~v---------------------------------~~g~~~~~~~~~~-------------- 725 (961)
.+-.|.++||...++++.-. .+..+..-++.++
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 99999999998877662100 0000000000000
Q ss_pred ----------------HHHHHHhcCc--------eEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCH--hhhhhCCee
Q psy6866 726 ----------------LKDILETNKE--------LVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDA--PALKKADIG 779 (961)
Q Consensus 726 ----------------~~~~~~~~~~--------~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~--~al~~AdvG 779 (961)
+.++-.+.++ -.|..++|+.-.++|+.+|++|++++++|...|-- ..+-+||++
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadIS 1015 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADIS 1015 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEcccee
Confidence 0011011000 16999999999999999999999999999999843 356789999
Q ss_pred EeecC------------CccHh-hhh-----------------ccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy6866 780 IAMGI------------TGSEV-SKQ-----------------TADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILA 829 (961)
Q Consensus 780 Iamg~------------~g~~~-a~~-----------------aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~ 829 (961)
||+.. -++.. ..+ ++|+-+.....-++..+|+-+|.....+|+.+.|.+.
T Consensus 1016 ialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq 1095 (1354)
T KOG4383|consen 1016 IALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQ 1095 (1354)
T ss_pred EEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 98831 01111 011 3344444444556788999999999999999999999
Q ss_pred hhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhh-hcccCCCCCccc
Q psy6866 830 SNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVS-LAYEKPESNIMS 881 (961)
Q Consensus 830 ~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~la-l~~e~~~~~~~~ 881 (961)
..+...+.++...++.+|..++..+++|...+-..+-.+. |-..+|...+|.
T Consensus 1096 ~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~hkSii~ 1148 (1354)
T KOG4383|consen 1096 AQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEHKSIII 1148 (1354)
T ss_pred HHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHHHHhcCCCccceEE
Confidence 9988888888888888999999999999998875444443 223344444443
No 37
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.50 E-value=1.2e-13 Score=124.60 Aligned_cols=118 Identities=27% Similarity=0.320 Sum_probs=103.6
Q ss_pred ceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHH
Q psy6866 652 FRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILE 731 (961)
Q Consensus 652 l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~ 731 (961)
+...+.++---++=++++++|++|++. +++++.|||...+....|+-.|+..+
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------- 71 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------- 71 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--------------------------
Confidence 355677777778889999999999999 99999999999999999999998653
Q ss_pred hcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEee-c-CCccHhhhhccceEeec
Q psy6866 732 TNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAM-G-ITGSEVSKQTADMILMD 800 (961)
Q Consensus 732 ~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIam-g-~~g~~~a~~aad~vl~~ 800 (961)
.+|+-..|+.|.++++.|+++++.|.|+|||.||.+||+.||+||+. + .+..+-+.++||+++.+
T Consensus 72 ----rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~ 138 (152)
T COG4087 72 ----RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE 138 (152)
T ss_pred ----eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh
Confidence 38999999999999999999999999999999999999999999975 3 13445567899999874
No 38
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.43 E-value=2.9e-13 Score=120.63 Aligned_cols=88 Identities=38% Similarity=0.608 Sum_probs=72.3
Q ss_pred HHccCceecCCCCCcccccccccCChhHHHHHHhhccc--ccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEE
Q psy6866 497 CLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPR--IKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLL 574 (961)
Q Consensus 497 ~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~--~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~ 574 (961)
++||++.+..+.+... ....|+|+|.||+.|+... +.+....+..+++++++||||+||+|++++. .++.+.++
T Consensus 1 ~LCn~a~~~~~~~~~~---~~~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~ 76 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKT---EEIIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILY 76 (91)
T ss_pred CCccccEeecCCCCcc---ccccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEE
Confidence 5799888755443211 2378999999999999987 4467788899999999999999999999998 33457779
Q ss_pred EeCChHHHHHHhhc
Q psy6866 575 MKGAPEVIMERCTT 588 (961)
Q Consensus 575 ~KGa~e~Il~~c~~ 588 (961)
+|||||.|+++|++
T Consensus 77 ~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 77 VKGAPEVILDRCTH 90 (91)
T ss_pred cCCChHHHHHhcCC
Confidence 99999999999985
No 39
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.32 E-value=3.9e-12 Score=107.39 Aligned_cols=69 Identities=33% Similarity=0.453 Sum_probs=64.9
Q ss_pred ccCCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHH
Q psy6866 115 EHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLS 183 (961)
Q Consensus 115 ~~~~~~~~l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails 183 (961)
||..+.+++++.|+|+...||+.+|+++|+++||+|.++.++++++|+.++++|.++|.++|++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 688999999999999999999999999999999999999888999999999999999999999998775
No 40
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.14 E-value=6.1e-11 Score=121.23 Aligned_cols=80 Identities=36% Similarity=0.800 Sum_probs=65.8
Q ss_pred CchhHHHHHHHHHHhhhhhhHhhhcccCCCCCcccCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy6866 847 PLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYFHVMYDAGW 926 (961)
Q Consensus 847 ~~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 926 (961)
|+|++++|+||+|+++|.+|+++|++|||++++|+||||++ ++++++++++... ...|++++++++++|++.++..|.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~-~~~l~~~~~~~~i-~~~g~~~~~~~~~~f~~~~~~~~~ 78 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDP-NEPLINKRLLRRI-LIQGLIMAAACFFAFFLGLYIFGW 78 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TT-TS-SSSHHHHHHH-CCHHHHHHHHHHHHHHHHHHSTCS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhcccccc-chhhccHHhHhHH-HHHHHHHHHHHHHHHHHHhhcccc
Confidence 78999999999999999999999999999999999999964 7999999998876 667999999999999999886665
Q ss_pred CC
Q psy6866 927 DP 928 (961)
Q Consensus 927 ~~ 928 (961)
..
T Consensus 79 ~~ 80 (182)
T PF00689_consen 79 DE 80 (182)
T ss_dssp SS
T ss_pred cc
Confidence 54
No 41
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=99.00 E-value=9.7e-10 Score=91.36 Aligned_cols=61 Identities=33% Similarity=0.418 Sum_probs=55.7
Q ss_pred HhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy6866 126 ILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLA 186 (961)
Q Consensus 126 ~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~ 186 (961)
.|++++..||+.+++++|+++||+|.++++++.++|+.++++|++++.++|+++++++++.
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4678888899999999999999999999988899999999999999999999999888643
No 42
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.99 E-value=1.9e-09 Score=117.63 Aligned_cols=67 Identities=25% Similarity=0.313 Sum_probs=56.8
Q ss_pred HHHHHHHHHHhhc-C---CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 744 LQKLRIVELYQSL-D---EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 744 ~~K~~iv~~l~~~-g---~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
..|..-++.+.+. | +.|+++|||.||.+||+.|++|+||| ++.+.+|++||+|..+++-+++.++++
T Consensus 195 vsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 195 VNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHH
Confidence 4566666666543 2 45777799999999999999999999 999999999999999999999998876
No 43
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.96 E-value=5.3e-09 Score=113.66 Aligned_cols=148 Identities=22% Similarity=0.291 Sum_probs=104.0
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC--C--------------------------------
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS--D-------------------------------- 709 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~--~-------------------------------- 709 (961)
+.+.+.++|+++++.|++++++||+....+..+.+++++...-.. .
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~ 100 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQG 100 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccC
Confidence 889999999999999999999999999999999999999642100 0
Q ss_pred -ceeEechh---------------------------hc----------cCCHHHHHHH----HHhcC--ceEEeecCH--
Q psy6866 710 -DNVFTGTD---------------------------LR----------KITDEELKDI----LETNK--ELVFARTSP-- 743 (961)
Q Consensus 710 -~~v~~g~~---------------------------~~----------~~~~~~~~~~----~~~~~--~~v~ar~~p-- 743 (961)
...+...+ .. ....+...++ ..... ...+.+..+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~ 180 (264)
T COG0561 101 IALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPIS 180 (264)
T ss_pred ceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCce
Confidence 00000000 00 0001111111 11111 122222222
Q ss_pred -------HHHHHHHHHHhh-cC---CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHH
Q psy6866 744 -------LQKLRIVELYQS-LD---EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEE 812 (961)
Q Consensus 744 -------~~K~~iv~~l~~-~g---~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~ 812 (961)
.+|+..++.+.+ .| +.|+++||+.||.+||+.|+.||||| ++.+.+|+.||++...++-+++.+++++
T Consensus 181 lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 181 LDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred EEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 478888888766 23 24777799999999999999999999 8899999999988899999999988874
No 44
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.96 E-value=4.7e-09 Score=111.57 Aligned_cols=148 Identities=25% Similarity=0.270 Sum_probs=102.1
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCC--CCCceeEe---chhhcc-----------------
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSET--SSDDNVFT---GTDLRK----------------- 720 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~--~~~~~v~~---g~~~~~----------------- 720 (961)
.+.+.+.++|+++++.|++++++||+....+..+++++|+..+. ...+.++. +..+..
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 37788999999999999999999999999999999999985321 00111111 100000
Q ss_pred ------------------------CCHHHHHHHHHhcCc-eE------EeecCH--HHHHHHHHHHhhc----CCEEEEE
Q psy6866 721 ------------------------ITDEELKDILETNKE-LV------FARTSP--LQKLRIVELYQSL----DEIVAVT 763 (961)
Q Consensus 721 ------------------------~~~~~~~~~~~~~~~-~v------~ar~~p--~~K~~iv~~l~~~----g~~V~~v 763 (961)
...+++.+.+..... .. +....| ..|..-++.+.+. .+.++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred cccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 001122222221110 00 112222 2477777777543 2457788
Q ss_pred cCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 764 GDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 764 GDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
||+.||.+|++.|++|+||| ++.+.+|+.||+|..+++-+++.++++
T Consensus 180 GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 180 GDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 99999999999999999999 999999999999999999999998876
No 45
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.95 E-value=3.2e-09 Score=109.81 Aligned_cols=131 Identities=14% Similarity=0.129 Sum_probs=98.0
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+..--.. ...+.+.. .++. ... ..
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an-~l~~~~~g--~~tG------------~~~--~~ 129 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCH-KLEIDDSD--RVVG------------YQL--RQ 129 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhce-eeEEecCC--eeEC------------eee--cC
Confidence 68999999999999975 9999999999999999999999532111 11111100 0000 011 35
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEG 813 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~g 813 (961)
+..|...++.+++.+..+.++|||.||.+|++.||+||++. +.+..+++||=.-.-.+++.+..++.++
T Consensus 130 ~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 130 KDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred cchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 67899999999888877889999999999999999999995 7777777776555555778787777654
No 46
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.91 E-value=6.5e-09 Score=113.51 Aligned_cols=66 Identities=14% Similarity=0.121 Sum_probs=55.7
Q ss_pred HHHHHHHHHhhc-C---CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccce--EeecCCchHHHHHHH
Q psy6866 745 QKLRIVELYQSL-D---EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADM--ILMDDNFASIVLGIE 811 (961)
Q Consensus 745 ~K~~iv~~l~~~-g---~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~--vl~~~~~~~i~~~i~ 811 (961)
.|..-++.+.+. | +.|+++|||.||.+||+.|+.||||| ++.+.+|++||. ++.+++-+++..+++
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 677777777553 2 35777799999999999999999999 999999999996 777888899988775
No 47
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.91 E-value=5.3e-09 Score=109.95 Aligned_cols=146 Identities=23% Similarity=0.251 Sum_probs=100.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC--CceeEechh-hc--cC----------------
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS--DDNVFTGTD-LR--KI---------------- 721 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~--~~~v~~g~~-~~--~~---------------- 721 (961)
.+.+.+.++|++|++.|++++++||++...+..+++++++..+... ...++.... +. ..
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4888999999999999999999999999999999999998532100 011111100 00 00
Q ss_pred -------------------CHHHHHHHHHhcCc-eE----Eee--cCHHHHHHHHHHHhhc----CCEEEEEcCCCCCHh
Q psy6866 722 -------------------TDEELKDILETNKE-LV----FAR--TSPLQKLRIVELYQSL----DEIVAVTGDGVNDAP 771 (961)
Q Consensus 722 -------------------~~~~~~~~~~~~~~-~v----~ar--~~p~~K~~iv~~l~~~----g~~V~~vGDG~ND~~ 771 (961)
..+.+...+....- .+ +.. ....+|...++.+.+. .+.++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 00111111111110 01 112 2235888888887653 235888899999999
Q ss_pred hhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHH
Q psy6866 772 ALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLG 809 (961)
Q Consensus 772 al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~ 809 (961)
|++.|++|+||+ ++.+.+|+.||++..+++-+++.++
T Consensus 178 ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 999999999999 9999999999999988888888764
No 48
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.89 E-value=1.2e-08 Score=108.11 Aligned_cols=148 Identities=18% Similarity=0.167 Sum_probs=100.1
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC--CceeEechh-----hccC--------------
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS--DDNVFTGTD-----LRKI-------------- 721 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~--~~~v~~g~~-----~~~~-------------- 721 (961)
.+.+.+.++|+++++.|+.++++||++...+..+.+++|+...... ...+..... ...+
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 4778889999999999999999999999999999999995322100 011111000 0000
Q ss_pred ----------------------CHHHHHHHHHhcCceE-------EeecCH--HHHHHHHHHHhhc----CCEEEEEcCC
Q psy6866 722 ----------------------TDEELKDILETNKELV-------FARTSP--LQKLRIVELYQSL----DEIVAVTGDG 766 (961)
Q Consensus 722 ----------------------~~~~~~~~~~~~~~~v-------~ar~~p--~~K~~iv~~l~~~----g~~V~~vGDG 766 (961)
..+....+.......+ +....| ..|...++.+.+. .+.++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 1111222222211101 112222 4788888877553 2457888999
Q ss_pred CCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchH----HHHHHH
Q psy6866 767 VNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFAS----IVLGIE 811 (961)
Q Consensus 767 ~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~----i~~~i~ 811 (961)
.||.+|++.|++|+||| ++.+.+|+.||.|..+++-++ +..+++
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999 899999999999998888888 655544
No 49
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.89 E-value=5.9e-09 Score=115.19 Aligned_cols=130 Identities=17% Similarity=0.260 Sum_probs=96.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEe-ec
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFA-RT 741 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~a-r~ 741 (961)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+..-......+..|.-.. .+.. -+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg----------------~v~g~iv 244 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTG----------------NVLGDIV 244 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEe----------------EecCccC
Confidence 689999999999999999999999999888889999999843110000111110000 0110 12
Q ss_pred CHHHHHHHHHHHhhc-C---CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHH
Q psy6866 742 SPLQKLRIVELYQSL-D---EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGI 810 (961)
Q Consensus 742 ~p~~K~~iv~~l~~~-g---~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i 810 (961)
....|.+.++.+.++ | +.+.++|||.||.+|++.|++|||| ++.+..++.||.++...++++++.++
T Consensus 245 ~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 245 DAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred CcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 335788888877653 2 4677889999999999999999999 68899999999999988999887654
No 50
>PRK10976 putative hydrolase; Provisional
Probab=98.86 E-value=1.3e-08 Score=110.87 Aligned_cols=66 Identities=21% Similarity=0.200 Sum_probs=55.1
Q ss_pred HHHHHHHHHhhc-C---CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccc--eEeecCCchHHHHHHH
Q psy6866 745 QKLRIVELYQSL-D---EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTAD--MILMDDNFASIVLGIE 811 (961)
Q Consensus 745 ~K~~iv~~l~~~-g---~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad--~vl~~~~~~~i~~~i~ 811 (961)
.|..-++.+.+. | +.|+++|||.||.+||+.|+.|+||| ++.+.+|+.|| .|+.+++-+++.++++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 566666666543 2 45777799999999999999999999 99999999988 7788888899988875
No 51
>PLN02887 hydrolase family protein
Probab=98.78 E-value=3.5e-08 Score=116.54 Aligned_cols=66 Identities=27% Similarity=0.381 Sum_probs=54.1
Q ss_pred HHHHHHHHHhhc-C---CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 745 QKLRIVELYQSL-D---EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 745 ~K~~iv~~l~~~-g---~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
.|+.-++.+.+. | +.|+++|||.||.+||+.|++||||| ||.+.+|++||+|..+++-+++..+++
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 344444444332 2 34667799999999999999999999 999999999999999999999998876
No 52
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.78 E-value=2.6e-08 Score=99.50 Aligned_cols=104 Identities=16% Similarity=0.181 Sum_probs=83.2
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeec--CHHHHH
Q psy6866 670 DAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFART--SPLQKL 747 (961)
Q Consensus 670 ~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~--~p~~K~ 747 (961)
..|+.|++.|+++.++|+.+...+..+.+.+|+.. .|... .|+-..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~--------------------------------~f~~~kpkp~~~~ 88 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR--------------------------------FHEGIKKKTEPYA 88 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE--------------------------------EEecCCCCHHHHH
Confidence 47999999999999999999999999999999953 22222 344444
Q ss_pred HHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHH
Q psy6866 748 RIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASI 806 (961)
Q Consensus 748 ~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i 806 (961)
.+++.+.-..+.++++||+.||.+|++.|++++||+ ++.+.+++.|++|+..++-.+.
T Consensus 89 ~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 89 QMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred HHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCCCCH
Confidence 444544433456889999999999999999999999 8999999999999876554443
No 53
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.77 E-value=4.1e-08 Score=107.22 Aligned_cols=66 Identities=29% Similarity=0.389 Sum_probs=55.2
Q ss_pred HHHHHHHHHhhc-C---CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 745 QKLRIVELYQSL-D---EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 745 ~K~~iv~~l~~~-g---~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
.|...++.+.++ | +.++++||+.||.+|++.|++|+||| ++.+.+|+.||+++.+++-+++.++++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 466666655432 2 35778899999999999999999999 888989999999999999999998876
No 54
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.76 E-value=3.7e-08 Score=105.80 Aligned_cols=147 Identities=21% Similarity=0.255 Sum_probs=99.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC--Cce-----------------------------
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS--DDN----------------------------- 711 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~--~~~----------------------------- 711 (961)
.+.+++.++|++++++|+++++.||+....+..+..++++...... .+.
T Consensus 15 ~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 94 (254)
T PF08282_consen 15 KISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKEH 94 (254)
T ss_dssp SSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHHT
T ss_pred eeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhhc
Confidence 5678999999999999999999999999999999999998521000 000
Q ss_pred -----eEechhhcc---------------------------------------CCHHHHHHHH----HhcCce-EEee--
Q psy6866 712 -----VFTGTDLRK---------------------------------------ITDEELKDIL----ETNKEL-VFAR-- 740 (961)
Q Consensus 712 -----v~~g~~~~~---------------------------------------~~~~~~~~~~----~~~~~~-v~ar-- 740 (961)
+.++..+.. ...+++..+. ...... .+.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 174 (254)
T PF08282_consen 95 NISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRSS 174 (254)
T ss_dssp TCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred ccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEec
Confidence 000000000 0111221111 111110 1222
Q ss_pred -----cC--HHHHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHH
Q psy6866 741 -----TS--PLQKLRIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLG 809 (961)
Q Consensus 741 -----~~--p~~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~ 809 (961)
.+ ...|...++.+.+. .+.++++||+.||.+||+.|+.|+||+ ++++..++.||+++...+-++++++
T Consensus 175 ~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 175 PYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVAKA 253 (254)
T ss_dssp TTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHHHH
T ss_pred ccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHHHh
Confidence 22 26888888888642 245677799999999999999999999 9999999999999998777898876
Q ss_pred H
Q psy6866 810 I 810 (961)
Q Consensus 810 i 810 (961)
|
T Consensus 254 i 254 (254)
T PF08282_consen 254 I 254 (254)
T ss_dssp H
T ss_pred C
Confidence 4
No 55
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.73 E-value=4.4e-08 Score=103.32 Aligned_cols=128 Identities=20% Similarity=0.266 Sum_probs=92.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEee-c
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFAR-T 741 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar-~ 741 (961)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+..-... .....+..+.. .+... .
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~-~~~~~~~~~~~---------------~~~~~~~ 148 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFAN-RLEVEDGKLTG---------------LVEGPIV 148 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEee-EEEEECCEEEE---------------EecCccc
Confidence 5899999999999999999999999999999999999998541110 00000000000 00111 1
Q ss_pred CHHHHHHHHHHHhhcC----CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHH
Q psy6866 742 SPLQKLRIVELYQSLD----EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVL 808 (961)
Q Consensus 742 ~p~~K~~iv~~l~~~g----~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~ 808 (961)
.+..|..+++.+.++. +.+.++||+.||.+|++.|+++++++ +.+..+++||.++.++++..+..
T Consensus 149 ~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~ 217 (219)
T TIGR00338 149 DASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILP 217 (219)
T ss_pred CCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHh
Confidence 1233666766654432 35778899999999999999999985 67888999999999999887764
No 56
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.71 E-value=1.6e-07 Score=101.65 Aligned_cols=147 Identities=14% Similarity=0.117 Sum_probs=94.6
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCC--CCceeEechh--------h--ccCCHHHHHHHH-
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETS--SDDNVFTGTD--------L--RKITDEELKDIL- 730 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~--~~~~v~~g~~--------~--~~~~~~~~~~~~- 730 (961)
.-+.+.++|++|+++|++++++||+....+..+.+++|+..... ..+.++.... + ..++.+.+.+++
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 44468999999999999999999999999999999999743110 0122222110 0 001111111100
Q ss_pred ----------------------------------------------------------HhcCceE-----EeecCH--HH
Q psy6866 731 ----------------------------------------------------------ETNKELV-----FARTSP--LQ 745 (961)
Q Consensus 731 ----------------------------------------------------------~~~~~~v-----~ar~~p--~~ 745 (961)
....-.+ +....| ..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 0000000 001111 35
Q ss_pred HHHHHHHHhhc------CCEEEEEcCCCCCHhhhhhCCeeEeecCCcc---Hhhhhc--c-ceEeecCCchHHHHHHH
Q psy6866 746 KLRIVELYQSL------DEIVAVTGDGVNDAPALKKADIGIAMGITGS---EVSKQT--A-DMILMDDNFASIVLGIE 811 (961)
Q Consensus 746 K~~iv~~l~~~------g~~V~~vGDG~ND~~al~~AdvGIamg~~g~---~~a~~a--a-d~vl~~~~~~~i~~~i~ 811 (961)
|...++.+.+. .+.++++||+.||.+||+.|++||||| ++. +..|+. | ++|..+++-+++.++++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 66666555432 456888899999999999999999999 776 467876 4 58888889999998876
No 57
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.67 E-value=1e-07 Score=94.33 Aligned_cols=117 Identities=20% Similarity=0.179 Sum_probs=87.3
Q ss_pred eEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHh
Q psy6866 653 RLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILET 732 (961)
Q Consensus 653 ~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~ 732 (961)
.+++.+.+.|.. +|++|++.|+++.++||+....+..+.+++|+..
T Consensus 24 ~~~~~~~~~~~~------~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------- 69 (154)
T TIGR01670 24 EEIKAFNVRDGY------GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------- 69 (154)
T ss_pred cEEEEEechhHH------HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE----------------------------
Confidence 445555454432 8999999999999999999999999999999853
Q ss_pred cCceEEeecCHHHHHHHHHHHhh----cCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchH-HH
Q psy6866 733 NKELVFARTSPLQKLRIVELYQS----LDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFAS-IV 807 (961)
Q Consensus 733 ~~~~v~ar~~p~~K~~iv~~l~~----~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~-i~ 807 (961)
.|... ..|...++.+.+ ..+.++|+||+.||.+|++.|+++++|. ++.+..+..||+++..+.-.+ +.
T Consensus 70 ----~~~~~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~~~g~~~ 142 (154)
T TIGR01670 70 ----LYQGQ--SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVR 142 (154)
T ss_pred ----EEecc--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCCCCcHHH
Confidence 22211 234444444432 2356889999999999999999999998 788889999999998665333 54
Q ss_pred HHH
Q psy6866 808 LGI 810 (961)
Q Consensus 808 ~~i 810 (961)
+++
T Consensus 143 ~~~ 145 (154)
T TIGR01670 143 EVC 145 (154)
T ss_pred HHH
Confidence 433
No 58
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.66 E-value=9.4e-08 Score=99.41 Aligned_cols=117 Identities=21% Similarity=0.250 Sum_probs=88.0
Q ss_pred CCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCce----eEechhhccCCHHHHHHHHHhcCceE
Q psy6866 662 DPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDN----VFTGTDLRKITDEELKDILETNKELV 737 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~----v~~g~~~~~~~~~~~~~~~~~~~~~v 737 (961)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+...-..... +++|. ++
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~-------------------v~ 136 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGR-------------------VV 136 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEece-------------------ee
Confidence 58999999999999999999999999999999999999999653322111 23332 12
Q ss_pred EeecCHHHHHHHHHHHhh-cCC---EEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEee
Q psy6866 738 FARTSPLQKLRIVELYQS-LDE---IVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILM 799 (961)
Q Consensus 738 ~ar~~p~~K~~iv~~l~~-~g~---~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~ 799 (961)
--.+..+.|...++.+.+ .|. .+.++|||.||.|||+.|+.+++.+ +.+..+..|+....
T Consensus 137 g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~ 200 (212)
T COG0560 137 GPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIW 200 (212)
T ss_pred eeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcC
Confidence 234455789888866655 343 4677799999999999999999985 55555666655443
No 59
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.62 E-value=3e-07 Score=100.27 Aligned_cols=67 Identities=18% Similarity=0.132 Sum_probs=51.3
Q ss_pred HHHHHHHHHHhh-------cCCEEEEEcCCCCCHhhhhhCCeeEeecCCcc-Hh-----hhhccceEeecCCchHHHHHH
Q psy6866 744 LQKLRIVELYQS-------LDEIVAVTGDGVNDAPALKKADIGIAMGITGS-EV-----SKQTADMILMDDNFASIVLGI 810 (961)
Q Consensus 744 ~~K~~iv~~l~~-------~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~-~~-----a~~aad~vl~~~~~~~i~~~i 810 (961)
.+|..-++.+.+ ..+.|+++|||.||.+||+.|++||||| ++. +. .+..||++....+-+++.+++
T Consensus 186 ~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~-~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l 264 (271)
T PRK03669 186 AGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK-GLNREGVHLQDDDPARVYRTQREGPEGWREGL 264 (271)
T ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec-CCCCCCcccccccCCceEeccCCCcHHHHHHH
Confidence 356665555543 2346777899999999999999999999 444 32 355799999998889998887
Q ss_pred H
Q psy6866 811 E 811 (961)
Q Consensus 811 ~ 811 (961)
+
T Consensus 265 ~ 265 (271)
T PRK03669 265 D 265 (271)
T ss_pred H
Confidence 6
No 60
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.62 E-value=1.8e-07 Score=101.20 Aligned_cols=65 Identities=31% Similarity=0.364 Sum_probs=55.7
Q ss_pred HHHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHH
Q psy6866 744 LQKLRIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLG 809 (961)
Q Consensus 744 ~~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~ 809 (961)
..|..-++.+.+. .+.++++||+.||.+|++.|++|+||| ++.+.+|+.||+++.+++-+++..+
T Consensus 187 ~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 187 VSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred CChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhh
Confidence 4688888877653 246788899999999999999999999 8999999999999998888888764
No 61
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.51 E-value=1.3e-06 Score=95.48 Aligned_cols=66 Identities=21% Similarity=0.205 Sum_probs=52.8
Q ss_pred HHHHHHHHHhh----cC-CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhh----hcc-ceEe--ecCCchHHHHHHH
Q psy6866 745 QKLRIVELYQS----LD-EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSK----QTA-DMIL--MDDNFASIVLGIE 811 (961)
Q Consensus 745 ~K~~iv~~l~~----~g-~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~----~aa-d~vl--~~~~~~~i~~~i~ 811 (961)
.|...++.+.+ .. +.|+++||+.||.+|++.|++|+||+ +|.+.+| .+| +.+. ..++-+++.++++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 56666666543 24 77888999999999999999999999 9999988 666 6777 4556788888776
No 62
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.46 E-value=4e-07 Score=92.90 Aligned_cols=98 Identities=21% Similarity=0.249 Sum_probs=78.3
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHH
Q psy6866 670 DAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRI 749 (961)
Q Consensus 670 ~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~i 749 (961)
.+|+.|++.|+++.++||.....+..+++++|+.. +|. ....|...
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~--------------------------------~f~--g~~~k~~~ 100 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH--------------------------------LYQ--GQSNKLIA 100 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce--------------------------------eec--CCCcHHHH
Confidence 58999999999999999999999999999999853 232 12335555
Q ss_pred HHHHhh-c---CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCC
Q psy6866 750 VELYQS-L---DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDN 802 (961)
Q Consensus 750 v~~l~~-~---g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~ 802 (961)
++.+.+ . .+.++|+||+.||.+|++.|+++++++ ++.+..+..||+++....
T Consensus 101 l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~ 156 (183)
T PRK09484 101 FSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAG 156 (183)
T ss_pred HHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCC
Confidence 544432 2 346889999999999999999999998 778888889999996543
No 63
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.34 E-value=2.3e-06 Score=89.12 Aligned_cols=125 Identities=17% Similarity=0.205 Sum_probs=87.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEe--e
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFA--R 740 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~a--r 740 (961)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+...-. ......+.. .+.. .
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~-~~~~~~~~~------------------~i~~~~~ 127 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFC-HSLEVDEDG------------------MITGYDL 127 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhc-ceEEECCCC------------------eEECccc
Confidence 5689999999999999 9999999999999999999999853110 001111000 0111 1
Q ss_pred cCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHH
Q psy6866 741 TSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLG 809 (961)
Q Consensus 741 ~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~ 809 (961)
..|..|...++.++..++.+.|+|||.||.+|.+.|++|+..+ .+.+.....++..+. +++..+...
T Consensus 128 ~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~-~~~~el~~~ 194 (205)
T PRK13582 128 RQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAV-HTYDELLAA 194 (205)
T ss_pred cccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCccccc-CCHHHHHHH
Confidence 2467888888888888888999999999999999999999886 443333444555222 245555443
No 64
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.33 E-value=1.9e-06 Score=89.44 Aligned_cols=117 Identities=22% Similarity=0.229 Sum_probs=80.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+|+..-. . ..+.... ..... +. .+..+.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~-~-~~~~~~~-~g~~~-----------p~-~~~~~~ 144 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVY-S-NELVFDE-KGFIQ-----------PD-GIVRVT 144 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEE-E-EEEEEcC-CCeEe-----------cc-eeeEEc
Confidence 68999999999999999999999999999999999999974310 0 0011100 00000 00 112234
Q ss_pred HHHHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccc
Q psy6866 743 PLQKLRIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTAD 795 (961)
Q Consensus 743 p~~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad 795 (961)
|..|..+++.+.++ .+.+.++||+.||.+|++.|+++++++ .+....+.|+|
T Consensus 145 ~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 145 FDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred cccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 55677777766443 235888999999999999999999997 44444555554
No 65
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.33 E-value=1.4e-06 Score=82.50 Aligned_cols=116 Identities=24% Similarity=0.287 Sum_probs=90.6
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHH
Q psy6866 671 AIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIV 750 (961)
Q Consensus 671 ~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv 750 (961)
.|+.+.++||++.++||++...++.=|+++||.. ++.| -.+|....
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~-------~~qG---------------------------~~dK~~a~ 88 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH-------LYQG---------------------------ISDKLAAF 88 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce-------eeec---------------------------hHhHHHHH
Confidence 5999999999999999999999999999999942 2222 24677666
Q ss_pred HHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCC----chHHHHHHHHHHHHHHHHH
Q psy6866 751 ELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDN----FASIVLGIEEGRLIFDNLK 821 (961)
Q Consensus 751 ~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~----~~~i~~~i~~gR~~~~ni~ 821 (961)
+.|.++ -+.|+++||-.||.|+|++.++++|+. .+.+..++.||+|+.... +..+.++|..++..++-..
T Consensus 89 ~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~~~ 166 (170)
T COG1778 89 EELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDEAL 166 (170)
T ss_pred HHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHHHH
Confidence 666442 356889999999999999999999998 888888999999998664 3335566666665555443
No 66
>KOG1615|consensus
Probab=98.27 E-value=1.5e-06 Score=85.00 Aligned_cols=110 Identities=17% Similarity=0.268 Sum_probs=77.4
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
.+-|++++.+..|++.|.+|+++||--...+..+|.++||...+..-....-+.+-.... . + .--.-+.
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~g------f----d-~~~ptsd 156 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLG------F----D-TNEPTSD 156 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccc------c----c-cCCcccc
Confidence 478999999999999999999999999999999999999976433211111000000000 0 0 0001122
Q ss_pred HHHHHHHHHHHhhc--CCEEEEEcCCCCCHhhhhhCCeeEeec
Q psy6866 743 PLQKLRIVELYQSL--DEIVAVTGDGVNDAPALKKADIGIAMG 783 (961)
Q Consensus 743 p~~K~~iv~~l~~~--g~~V~~vGDG~ND~~al~~AdvGIamg 783 (961)
...|.+++..+++. -..++|+|||+||.+|+..||.=|+.|
T Consensus 157 sggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 157 SGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred CCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 34789999988873 458999999999999999988777655
No 67
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.17 E-value=6.2e-06 Score=88.04 Aligned_cols=68 Identities=19% Similarity=0.229 Sum_probs=56.2
Q ss_pred HHHHHHHHHHhhc-C---CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccc----eEeecCCchHHHHHHHH
Q psy6866 744 LQKLRIVELYQSL-D---EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTAD----MILMDDNFASIVLGIEE 812 (961)
Q Consensus 744 ~~K~~iv~~l~~~-g---~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad----~vl~~~~~~~i~~~i~~ 812 (961)
..|...++.+.++ | ..++++||+.||.+||+.|++||+|+ ++.+..|+.|| +|...++-.++.++|++
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 3777778777553 2 24677899999999999999999999 89999999999 77777777889888863
No 68
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.16 E-value=8e-06 Score=85.76 Aligned_cols=111 Identities=14% Similarity=0.100 Sum_probs=77.4
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEE--ee
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVF--AR 740 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~--ar 740 (961)
+++|++.+.++.|++.|+++.++||.....+..+.+.++.......+...+.|..+..... .+. .+ ..
T Consensus 70 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p---------~~~-~~~~~~ 139 (214)
T TIGR03333 70 EIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWP---------HPC-DGTCQN 139 (214)
T ss_pred cccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCC---------CCC-cccccc
Confidence 7899999999999999999999999999989888888754322111112233322111000 000 00 01
Q ss_pred cCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeec
Q psy6866 741 TSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMG 783 (961)
Q Consensus 741 ~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg 783 (961)
.....|..+++.++...+.+.|+|||.||.+|++.||+++|=+
T Consensus 140 ~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 140 QCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred CCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 1134799999988877778899999999999999999988744
No 69
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.06 E-value=1.5e-05 Score=85.70 Aligned_cols=149 Identities=15% Similarity=0.223 Sum_probs=96.5
Q ss_pred CCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCC----CCceeEech-hhc-----------------
Q psy6866 662 DPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETS----SDDNVFTGT-DLR----------------- 719 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~----~~~~v~~g~-~~~----------------- 719 (961)
.+..|...++++++++.|+.++++||+.....+.+.+++++..+.. ....++.+. ...
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 4567889999999999999999999999999999999998755410 011111110 000
Q ss_pred --------c-----------------CCHHH----H---HHHHHhc--C-ceEEe-----ecCH--HHHHHHHHHHhhc-
Q psy6866 720 --------K-----------------ITDEE----L---KDILETN--K-ELVFA-----RTSP--LQKLRIVELYQSL- 756 (961)
Q Consensus 720 --------~-----------------~~~~~----~---~~~~~~~--~-~~v~a-----r~~p--~~K~~iv~~l~~~- 756 (961)
. ...+. + .+.+... . ..+.+ ...| ..|...++.+.+.
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 0 00001 1 1111111 0 01111 2232 5788888887653
Q ss_pred ---CCEEEEEcCCCCCHhhhhh-CCeeEeecCCccHhhhhccc-------eEeecCCchHHHHHHH
Q psy6866 757 ---DEIVAVTGDGVNDAPALKK-ADIGIAMGITGSEVSKQTAD-------MILMDDNFASIVLGIE 811 (961)
Q Consensus 757 ---g~~V~~vGDG~ND~~al~~-AdvGIamg~~g~~~a~~aad-------~vl~~~~~~~i~~~i~ 811 (961)
.+.|+++||+.||.+|++. ++.|++|+ ++.+..++.++ ++.....-+++.++++
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3567788999999999998 67999999 88888886543 5555556678887776
No 70
>PRK08238 hypothetical protein; Validated
Probab=98.05 E-value=0.00027 Score=82.52 Aligned_cols=99 Identities=20% Similarity=0.242 Sum_probs=74.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
|++|++.+.++++++.|++++++|+-....+..+++.+|+.. .++.+++ ..++.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd------~Vigsd~--------------------~~~~k 125 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD------GVFASDG--------------------TTNLK 125 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC------EEEeCCC--------------------ccccC
Confidence 578999999999999999999999999999999999999832 2222221 11355
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHh
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEV 789 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~ 789 (961)
|+.|.+.+......+. +.++||+.||.++++.|+-.++++ .+...
T Consensus 126 g~~K~~~l~~~l~~~~-~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~l 170 (479)
T PRK08238 126 GAAKAAALVEAFGERG-FDYAGNSAADLPVWAAARRAIVVG-ASPGV 170 (479)
T ss_pred CchHHHHHHHHhCccC-eeEecCCHHHHHHHHhCCCeEEEC-CCHHH
Confidence 6667665543322222 467799999999999999999997 44433
No 71
>PLN02954 phosphoserine phosphatase
Probab=97.99 E-value=4.3e-05 Score=80.82 Aligned_cols=126 Identities=21% Similarity=0.263 Sum_probs=82.0
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCC-CCCceeEechhhccCCHHHHHHHHHhcCceEEee-
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSET-SSDDNVFTGTDLRKITDEELKDILETNKELVFAR- 740 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~-~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar- 740 (961)
+++|++.++++.|++.|+++.++||.....+..+.+.+|+.... ......+.... .+.+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g------------------~~~g~~ 145 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSG------------------EYAGFD 145 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCC------------------cEECcc
Confidence 47899999999999999999999999999999999999995311 00000110000 00000
Q ss_pred -----cCHHHHHHHHHHHhhc--CCEEEEEcCCCCCHhhhhh--CCeeEeecCCc-cHhhhhccceEeecCCchHHHH
Q psy6866 741 -----TSPLQKLRIVELYQSL--DEIVAVTGDGVNDAPALKK--ADIGIAMGITG-SEVSKQTADMILMDDNFASIVL 808 (961)
Q Consensus 741 -----~~p~~K~~iv~~l~~~--g~~V~~vGDG~ND~~al~~--AdvGIamg~~g-~~~a~~aad~vl~~~~~~~i~~ 808 (961)
.....|...++.+.+. .+.+.++||+.||..|.+. ++++++.|... .+.....+|+++. ++..+..
T Consensus 146 ~~~~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~ 221 (224)
T PLN02954 146 ENEPTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIE 221 (224)
T ss_pred CCCcccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHH
Confidence 1123477777766553 2467888999999999877 56667666221 2333456888875 4555543
No 72
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.89 E-value=2.2e-05 Score=79.53 Aligned_cols=93 Identities=24% Similarity=0.276 Sum_probs=69.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCce------eEechhhccCCHHHHHHHHHhcCce
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDN------VFTGTDLRKITDEELKDILETNKEL 736 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~------v~~g~~~~~~~~~~~~~~~~~~~~~ 736 (961)
+++|++.+.++.+++.|++++++||.....+..+++.+|+..-... .. .++|.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~-~~~~~~~g~~~g~-------------------- 131 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFAN-RLEFDDNGLLTGP-------------------- 131 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheee-eEEECCCCEEeCc--------------------
Confidence 4689999999999999999999999999999999999998531100 01 11111
Q ss_pred EE--eecCHHHHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhC
Q psy6866 737 VF--ARTSPLQKLRIVELYQSL----DEIVAVTGDGVNDAPALKKA 776 (961)
Q Consensus 737 v~--ar~~p~~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~A 776 (961)
+. ....+..|...++.+.+. .+.+.++|||.||.+|++.|
T Consensus 132 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 132 IEGQVNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 00 124567899999887653 34678889999999999875
No 73
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=97.89 E-value=2.1e-05 Score=80.80 Aligned_cols=92 Identities=23% Similarity=0.298 Sum_probs=68.9
Q ss_pred CChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHH-
Q psy6866 666 PAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPL- 744 (961)
Q Consensus 666 ~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~- 744 (961)
+++.+.|+.++++|++++++||+....+..+++.+|+.... ++... +..-. ......+.++.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~-----v~~~~-~~~~~-----------~~~~~~~~~~~~ 154 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN-----VIGNE-LFDNG-----------GGIFTGRITGSN 154 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG-----EEEEE-EECTT-----------CCEEEEEEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-----EEEEe-eeecc-----------cceeeeeECCCC
Confidence 88889999999999999999999999999999999996521 11111 10000 01234555544
Q ss_pred --HHHHHHHHH------hhcCCEEEEEcCCCCCHhhhh
Q psy6866 745 --QKLRIVELY------QSLDEIVAVTGDGVNDAPALK 774 (961)
Q Consensus 745 --~K~~iv~~l------~~~g~~V~~vGDG~ND~~al~ 774 (961)
.|...++.+ +.....+.++|||.||.||||
T Consensus 155 ~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 155 CGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp ESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred CCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 499999999 345778999999999999986
No 74
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.88 E-value=5.3e-05 Score=80.01 Aligned_cols=43 Identities=7% Similarity=0.098 Sum_probs=38.5
Q ss_pred cCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy6866 661 YDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHIL 703 (961)
Q Consensus 661 ~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~ 703 (961)
.+..-+++.++|++|+++|++++++||+....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3455667999999999999999999999999999999999974
No 75
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.87 E-value=3.9e-05 Score=78.54 Aligned_cols=113 Identities=14% Similarity=0.111 Sum_probs=75.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEee-c
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFAR-T 741 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar-~ 741 (961)
++++++.+.++.|++.|+++.++|+........+.+..|+...- ..++.+..... ....+.-....+ ..+.. .
T Consensus 72 ~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f---~~i~~~~~~~~-~~g~~~~~~~~~--~~~~~~~ 145 (188)
T TIGR01489 72 PIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF---IEIYSNPASFD-NDGRHIVWPHHC--HGCCSCP 145 (188)
T ss_pred CCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe---eEEeccCceEC-CCCcEEEecCCC--CccCcCC
Confidence 78999999999999999999999999999999999998874311 11222111000 000000000000 01111 1
Q ss_pred CHHHHHHHHHHHhhc-CCEEEEEcCCCCCHhhhhhCCeeEe
Q psy6866 742 SPLQKLRIVELYQSL-DEIVAVTGDGVNDAPALKKADIGIA 781 (961)
Q Consensus 742 ~p~~K~~iv~~l~~~-g~~V~~vGDG~ND~~al~~AdvGIa 781 (961)
....|..+++.+++. .+.+.++|||.||..|.+.||+-+|
T Consensus 146 ~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 223588999998886 7889999999999999999988765
No 76
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.82 E-value=5e-05 Score=78.88 Aligned_cols=102 Identities=17% Similarity=0.186 Sum_probs=75.5
Q ss_pred CCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCC-----ceeEechhhccCCHHHHHHHHHhcCce
Q psy6866 662 DPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSD-----DNVFTGTDLRKITDEELKDILETNKEL 736 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~-----~~v~~g~~~~~~~~~~~~~~~~~~~~~ 736 (961)
.++++++.+.++.+++.|++++++||.....+..+++.+|+..--... ...++|.
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~-------------------- 145 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGN-------------------- 145 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCC--------------------
Confidence 468999999999999999999999999999999999999985311000 0011111
Q ss_pred EE-eecCHHHHHHHHHHHhh-cC---CEEEEEcCCCCCHhhhhhCCeeEeec
Q psy6866 737 VF-ARTSPLQKLRIVELYQS-LD---EIVAVTGDGVNDAPALKKADIGIAMG 783 (961)
Q Consensus 737 v~-ar~~p~~K~~iv~~l~~-~g---~~V~~vGDG~ND~~al~~AdvGIamg 783 (961)
+. -.+.++.|...++.+.+ .+ +.+.++||+.+|.+|++.|+.++++.
T Consensus 146 ~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 146 IDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 00 12345778887776643 33 25778899999999999999999886
No 77
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.81 E-value=6.9e-05 Score=78.96 Aligned_cols=108 Identities=17% Similarity=0.148 Sum_probs=73.2
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCC-CCceeEechhhccCCHHHHHHHHHhcCceE-E-e
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETS-SDDNVFTGTDLRKITDEELKDILETNKELV-F-A 739 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~-~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v-~-a 739 (961)
+++|++.+.++.|++.|+++.++||-....+..+.+++ +..... .+...++|..+....+ .+... + .
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp---------~p~~~~~~~ 143 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWP---------HPCDEHCQN 143 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEecc---------CCccccccc
Confidence 68999999999999999999999999999999999887 533100 0011122221110000 00000 0 0
Q ss_pred ecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEe
Q psy6866 740 RTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIA 781 (961)
Q Consensus 740 r~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIa 781 (961)
++ ...|..+++.++...+.+.++|||.||.+|.+.||+.++
T Consensus 144 ~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 144 HC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred cC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 01 124888888887776778899999999999999999776
No 78
>PLN02382 probable sucrose-phosphatase
Probab=97.77 E-value=0.00012 Score=84.22 Aligned_cols=143 Identities=20% Similarity=0.228 Sum_probs=89.5
Q ss_pred hHHHH-HHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC----CceeEechhhc-----------------------
Q psy6866 668 VPDAI-DACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS----DDNVFTGTDLR----------------------- 719 (961)
Q Consensus 668 ~~~~I-~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~----~~~v~~g~~~~----------------------- 719 (961)
...++ +++++.|+..++.||+.+..+..+.++.++..+..- ...+..+....
T Consensus 33 ~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~~ 112 (413)
T PLN02382 33 RFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEETS 112 (413)
T ss_pred HHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHHh
Confidence 34444 889999999999999999999999999998765210 00111110000
Q ss_pred ----------------c----CCHHH-------HHHHHHhc--C-ceE-----EeecCH--HHHHHHHHHHhhc------
Q psy6866 720 ----------------K----ITDEE-------LKDILETN--K-ELV-----FARTSP--LQKLRIVELYQSL------ 756 (961)
Q Consensus 720 ----------------~----~~~~~-------~~~~~~~~--~-~~v-----~ar~~p--~~K~~iv~~l~~~------ 756 (961)
+ ..++. +.+.+... . ..+ +....| ..|...++.|.+.
T Consensus 113 ~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi 192 (413)
T PLN02382 113 KFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGK 192 (413)
T ss_pred cCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCC
Confidence 0 00111 11111110 0 001 223333 4688888888654
Q ss_pred -CCEEEEEcCCCCCHhhhhhCC-eeEeecCCccHhhhhcc--------ceEee-cCCchHHHHHHH
Q psy6866 757 -DEIVAVTGDGVNDAPALKKAD-IGIAMGITGSEVSKQTA--------DMILM-DDNFASIVLGIE 811 (961)
Q Consensus 757 -g~~V~~vGDG~ND~~al~~Ad-vGIamg~~g~~~a~~aa--------d~vl~-~~~~~~i~~~i~ 811 (961)
.+.++++||+.||.+||+.|+ .||||| ++.+..|+.+ +++.. +.+-++|.++++
T Consensus 193 ~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 193 APVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred ChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 236778899999999999999 699999 8998888643 55544 345677887775
No 79
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.73 E-value=0.00023 Score=75.10 Aligned_cols=126 Identities=21% Similarity=0.254 Sum_probs=92.7
Q ss_pred cCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEee
Q psy6866 661 YDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFAR 740 (961)
Q Consensus 661 ~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar 740 (961)
...+-|+++++++.|+++|++..++|+.....+..+.+..|+...-. .++.+.+ .-..+
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~---~i~g~~~------------------~~~~K 145 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD---VIVGGDD------------------VPPPK 145 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc---eEEcCCC------------------CCCCC
Confidence 34678999999999999999999999999999999999999965321 1111111 01223
Q ss_pred cCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCC---eeEeecCC-ccHhhhhccceEeecCCchHHHHH
Q psy6866 741 TSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKAD---IGIAMGIT-GSEVSKQTADMILMDDNFASIVLG 809 (961)
Q Consensus 741 ~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~Ad---vGIamg~~-g~~~a~~aad~vl~~~~~~~i~~~ 809 (961)
-.|.....+.+.+....+.++||||..+|..|=++|+ ||+..|.+ ..+.....+|+++. ++..+...
T Consensus 146 P~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~--~~~el~~~ 216 (220)
T COG0546 146 PDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID--SLAELLAL 216 (220)
T ss_pred cCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC--CHHHHHHH
Confidence 4666666776666655447999999999999999998 88888843 34556667899886 45555443
No 80
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.72 E-value=0.00025 Score=74.92 Aligned_cols=127 Identities=21% Similarity=0.256 Sum_probs=85.6
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.+.++.|++.|+++.++||........+.+..|+.... ..++.+.+.. ..+-.
T Consensus 93 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f---~~~~~~~~~~------------------~~kp~ 151 (226)
T PRK13222 93 RLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF---SVVIGGDSLP------------------NKKPD 151 (226)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc---cEEEcCCCCC------------------CCCcC
Confidence 57899999999999999999999999999999999999985321 1122221100 01122
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCe-eEee--cCC-ccHhhhhccceEeecCCchHHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADI-GIAM--GIT-GSEVSKQTADMILMDDNFASIVLGIEE 812 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~Adv-GIam--g~~-g~~~a~~aad~vl~~~~~~~i~~~i~~ 812 (961)
|+--..+++.++...+.+.++||+.||+.|.+.|++ +|.+ |.. ..+.....+++++ +++..+...+.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 152 PAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred hHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 333344455554445678899999999999999988 4444 311 2233445678777 467777766543
No 81
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.65 E-value=0.00019 Score=68.63 Aligned_cols=117 Identities=18% Similarity=0.198 Sum_probs=77.2
Q ss_pred eecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEE
Q psy6866 659 SLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVF 738 (961)
Q Consensus 659 ~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ 738 (961)
.-..++.+++.+.++.|++.|++++++||.....+....+.+|+.... ..++.......-.... ..........+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~--~~~~~~~~~~~ 94 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYF---DPVITSNGAAIYYPKE--GLFLGGGPFDI 94 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhh---hheeccchhhhhcccc--ccccccccccc
Confidence 445589999999999999999999999999999999999999873211 1111111000000000 00001112244
Q ss_pred eecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhh-CCeeE
Q psy6866 739 ARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKK-ADIGI 780 (961)
Q Consensus 739 ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~-AdvGI 780 (961)
.+-.|+.+..+.+.+....+.+.++||+.+|+.|++. ..-+|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i 137 (139)
T cd01427 95 GKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGV 137 (139)
T ss_pred CCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCcee
Confidence 5667777777777776556778899999999999998 44444
No 82
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.62 E-value=0.00036 Score=73.60 Aligned_cols=38 Identities=16% Similarity=0.205 Sum_probs=35.4
Q ss_pred CChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy6866 666 PAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHIL 703 (961)
Q Consensus 666 ~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~ 703 (961)
+.++++|+.|+++|++++++||+....+..+.+++|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 34899999999999999999999999999999999975
No 83
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.45 E-value=0.00026 Score=76.83 Aligned_cols=131 Identities=14% Similarity=0.210 Sum_probs=80.3
Q ss_pred CCCCChHHHHHHHHH-cCCEEEEEcCCCHHHHHHHHHHcCCC--CCCCCCceeEe--ch---------------------
Q psy6866 663 PPRPAVPDAIDACHK-AGIRVIMVTGDHPCTAKAIAIKCHIL--SETSSDDNVFT--GT--------------------- 716 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~-agi~v~m~TGD~~~ta~~ia~~~gi~--~~~~~~~~v~~--g~--------------------- 716 (961)
.+-+++.++|+.|++ .|+.++++||+.......+.+.+++. ..+. ..+.+ +.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nG--a~i~~~~~~~~~~~l~~~~~~~i~~~l~~~ 113 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHG--AERRDINGKTHIVHLPDAIARDISVQLHTA 113 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCC--CeeecCCCCeeeccCChhHHHHHHHHHHHH
Confidence 445789999999998 89999999999999998888776631 1110 00000 00
Q ss_pred -------h-----------hccCC--HHHHHHH----HHhcCce------EEeecCH--HHHHHHHHHHhhc----CCEE
Q psy6866 717 -------D-----------LRKIT--DEELKDI----LETNKEL------VFARTSP--LQKLRIVELYQSL----DEIV 760 (961)
Q Consensus 717 -------~-----------~~~~~--~~~~~~~----~~~~~~~------v~ar~~p--~~K~~iv~~l~~~----g~~V 760 (961)
. ..... .+.+..+ ....... .+....| .+|...++.+.+. .+.+
T Consensus 114 ~~~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v 193 (266)
T PRK10187 114 LAQLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTP 193 (266)
T ss_pred hccCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeE
Confidence 0 00011 1111111 1111101 1112222 5788888876553 3567
Q ss_pred EEEcCCCCCHhhhhhC----CeeEeecCCccHhhhhccceEeec
Q psy6866 761 AVTGDGVNDAPALKKA----DIGIAMGITGSEVSKQTADMILMD 800 (961)
Q Consensus 761 ~~vGDG~ND~~al~~A----dvGIamg~~g~~~a~~aad~vl~~ 800 (961)
+++||+.||.+||+.+ +.||+|| ++. ..|++.+.+
T Consensus 194 ~~~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~~ 232 (266)
T PRK10187 194 VFVGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLAG 232 (266)
T ss_pred EEEcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCCC
Confidence 8889999999999999 9999999 553 346776663
No 84
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.44 E-value=0.00082 Score=69.95 Aligned_cols=124 Identities=19% Similarity=0.240 Sum_probs=83.0
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.+++.++++.|++.|+++.++|+.....+....+..|+...- ..++...+ ....+-.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f---~~i~~~~~------------------~~~~KP~ 133 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF---DHVIGSDE------------------VPRPKPA 133 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe---eeEEecCc------------------CCCCCCC
Confidence 67899999999999999999999999999898888899885311 01111111 0112333
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE---eecC-CccHhhhhccceEeecCCchHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI---AMGI-TGSEVSKQTADMILMDDNFASIVLG 809 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI---amg~-~g~~~a~~aad~vl~~~~~~~i~~~ 809 (961)
|+--..+++.++-..+.++|+||+.+|..+-++|++.. .-|. +..+..+..+|+++. ++..+..+
T Consensus 134 ~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~--~~~~l~~~ 202 (205)
T TIGR01454 134 PDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLR--KPQSLLAL 202 (205)
T ss_pred hHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeC--CHHHHHHH
Confidence 44444455555444567899999999999999998864 3331 222345667888874 45555443
No 85
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.33 E-value=0.00089 Score=79.54 Aligned_cols=40 Identities=8% Similarity=0.048 Sum_probs=36.0
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHIL 703 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~ 703 (961)
.-+.+.++|++|+++|+.++++||+....+..+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 3356899999999999999999999999999999999873
No 86
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.24 E-value=0.0018 Score=70.52 Aligned_cols=123 Identities=15% Similarity=0.247 Sum_probs=78.2
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+.....+..+.++.|+.... ..++.+.+.. ..+-.
T Consensus 101 ~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f---~~i~~~d~~~------------------~~Kp~ 159 (272)
T PRK13223 101 VVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF---RWIIGGDTLP------------------QKKPD 159 (272)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC---eEEEecCCCC------------------CCCCC
Confidence 68899999999999999999999999998888888888874311 1122221100 01122
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCee---EeecCC-ccHhhhhccceEeecCCchHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIG---IAMGIT-GSEVSKQTADMILMDDNFASIVL 808 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvG---Iamg~~-g~~~a~~aad~vl~~~~~~~i~~ 808 (961)
|+--..+.+.+.-..+.+.|+||+.||+.|.+.|++. ++.|.. ..+.....+|.++. ++..+..
T Consensus 160 p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~ 227 (272)
T PRK13223 160 PAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLP 227 (272)
T ss_pred cHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHH
Confidence 2222233333332345688999999999999999973 333311 22233457888874 5555543
No 87
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.23 E-value=0.0019 Score=69.27 Aligned_cols=42 Identities=10% Similarity=0.110 Sum_probs=38.0
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILS 704 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~ 704 (961)
..-+.+.++|++|+++||.++++||........+.+++|+..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 455668999999999999999999999999999999999853
No 88
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.16 E-value=0.0022 Score=67.28 Aligned_cols=125 Identities=22% Similarity=0.223 Sum_probs=82.2
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+.....+..+-+..|+...- ..++.+.+. -..+..
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f---~~i~~~~~~------------------~~~Kp~ 140 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF---DVVITLDDV------------------EHAKPD 140 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce---eEEEecCcC------------------CCCCCC
Confidence 47799999999999999999999999999999999999985421 111111110 011233
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCee---EeecCCccH-hhhhccceEeecCCchHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIG---IAMGITGSE-VSKQTADMILMDDNFASIVLGI 810 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvG---Iamg~~g~~-~a~~aad~vl~~~~~~~i~~~i 810 (961)
|+--..+++.+.-....++++||+.+|..|-++|++- ++-|....+ .....+|+++. ++..+...+
T Consensus 141 p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 141 PEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred cHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 4444445555543445688999999999999999984 434421222 23345787765 566665543
No 89
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.04 E-value=0.003 Score=66.02 Aligned_cols=121 Identities=17% Similarity=0.174 Sum_probs=78.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+.....+..+.+..|+...- ..++.+.+. -..+-.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f---~~~~~~~~~------------------~~~Kp~ 143 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF---SVLIGGDSL------------------AQRKPH 143 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC---cEEEecCCC------------------CCCCCC
Confidence 57899999999999999999999999999999999999985421 112221110 011222
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEee---cCCcc-HhhhhccceEeecCCchHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAM---GITGS-EVSKQTADMILMDDNFASI 806 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIam---g~~g~-~~a~~aad~vl~~~~~~~i 806 (961)
|+-=..+.+.+.-..+.++++||+.+|+.|.++|++-... |-... +.....+|+++. ++..+
T Consensus 144 p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~--~~~~l 209 (213)
T TIGR01449 144 PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD--SLNEL 209 (213)
T ss_pred hHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC--CHHHH
Confidence 3323334444433345688999999999999999987542 21111 222345787764 34444
No 90
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=96.90 E-value=0.0043 Score=65.47 Aligned_cols=99 Identities=16% Similarity=0.206 Sum_probs=68.0
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+........+.+..|+...- ..++.+.+. -..+-.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f---~~~~~~~~~------------------~~~Kp~ 150 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF---DALASAEKL------------------PYSKPH 150 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc---cEEEEcccC------------------CCCCCC
Confidence 57899999999999999999999999999999999999985431 112222110 012233
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEee
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAM 782 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIam 782 (961)
|+-=..+.+.+.-..+.++++||+.||+.+-+.|++....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~ 190 (222)
T PRK10826 151 PEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIV 190 (222)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEE
Confidence 3322222222222234678999999999999999987543
No 91
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=96.90 E-value=0.0071 Score=65.03 Aligned_cols=128 Identities=14% Similarity=0.224 Sum_probs=80.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC---C------ceeEechhhccCCHHHHHHHHHhc
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS---D------DNVFTGTDLRKITDEELKDILETN 733 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~---~------~~v~~g~~~~~~~~~~~~~~~~~~ 733 (961)
++||++.+.++.|++.|+++.++||-....+..+.++.|+...... + .-+++|.. .
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~--~------------- 185 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFK--G------------- 185 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCC--C-------------
Confidence 6899999999999999999999999999999999999998543311 0 01122210 0
Q ss_pred CceEEeecCHHHHHHHHHH-----Hh--hcCCEEEEEcCCCCCHhhhhhC---CeeEeec-CCc-cH----hhhhccceE
Q psy6866 734 KELVFARTSPLQKLRIVEL-----YQ--SLDEIVAVTGDGVNDAPALKKA---DIGIAMG-ITG-SE----VSKQTADMI 797 (961)
Q Consensus 734 ~~~v~ar~~p~~K~~iv~~-----l~--~~g~~V~~vGDG~ND~~al~~A---dvGIamg-~~g-~~----~a~~aad~v 797 (961)
..+. ...|.+.+.. +. .....+.++|||.||++|..-. ..-+..| .+. .| .-+++=|+|
T Consensus 186 -P~i~----~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Div 260 (277)
T TIGR01544 186 -PLIH----TFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIV 260 (277)
T ss_pred -Cccc----ccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEE
Confidence 0011 1345543332 22 2234577889999999996543 2233333 121 12 235688999
Q ss_pred eecCCchHHHHHH
Q psy6866 798 LMDDNFASIVLGI 810 (961)
Q Consensus 798 l~~~~~~~i~~~i 810 (961)
+.+|.=-.++.+|
T Consensus 261 l~~D~t~~v~~~i 273 (277)
T TIGR01544 261 LVQDETLEVANSI 273 (277)
T ss_pred EECCCCchHHHHH
Confidence 9988655555444
No 92
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.82 E-value=0.0056 Score=63.87 Aligned_cols=106 Identities=12% Similarity=0.137 Sum_probs=73.5
Q ss_pred CCCCChHHHHH-HHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeec
Q psy6866 663 PPRPAVPDAID-ACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFART 741 (961)
Q Consensus 663 ~lr~~~~~~I~-~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~ 741 (961)
.++|++.++|+ .+++.|++++++|+-....+..+|+..++.... ..+ |.++..... ....-..|
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~---~~i--~t~le~~~g----------g~~~g~~c 158 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL---NLI--ASQIERGNG----------GWVLPLRC 158 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC---cEE--EEEeEEeCC----------ceEcCccC
Confidence 46899999996 788899999999999999999999986653311 111 222111000 00112346
Q ss_pred CHHHHHHHHHHHh-hcCCEEEEEcCCCCCHhhhhhCCeeEeec
Q psy6866 742 SPLQKLRIVELYQ-SLDEIVAVTGDGVNDAPALKKADIGIAMG 783 (961)
Q Consensus 742 ~p~~K~~iv~~l~-~~g~~V~~vGDG~ND~~al~~AdvGIamg 783 (961)
..++|..-++..- ...+...+=||+.||.|||+.||..++++
T Consensus 159 ~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 159 LGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred CChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 7789988776543 22234445599999999999999999985
No 93
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.79 E-value=0.0041 Score=64.59 Aligned_cols=39 Identities=23% Similarity=0.405 Sum_probs=35.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCH 701 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~g 701 (961)
++.+.+.++|++|++.|+.++++||+....+..+.++++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 467889999999999999999999999999999988744
No 94
>PRK11590 hypothetical protein; Provisional
Probab=96.74 E-value=0.011 Score=61.89 Aligned_cols=106 Identities=12% Similarity=0.098 Sum_probs=73.7
Q ss_pred CCCCChHHHH-HHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeec
Q psy6866 663 PPRPAVPDAI-DACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFART 741 (961)
Q Consensus 663 ~lr~~~~~~I-~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~ 741 (961)
.+.|++.+.| +.+++.|++++++|+-...-+..+++.+|+... +..+ |.++... ......-..|
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~---~~~i--~t~l~~~----------~tg~~~g~~c 159 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPR---VNLI--ASQMQRR----------YGGWVLTLRC 159 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccccc---CceE--EEEEEEE----------EccEECCccC
Confidence 4589999999 578889999999999999999999999996221 0111 2111110 0000112346
Q ss_pred CHHHHHHHHHHH-hhcCCEEEEEcCCCCCHhhhhhCCeeEeec
Q psy6866 742 SPLQKLRIVELY-QSLDEIVAVTGDGVNDAPALKKADIGIAMG 783 (961)
Q Consensus 742 ~p~~K~~iv~~l-~~~g~~V~~vGDG~ND~~al~~AdvGIamg 783 (961)
..++|..-++.. ........+=||+.||.|||+.|+.+++++
T Consensus 160 ~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 160 LGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred CChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 778998877754 323334445599999999999999999986
No 95
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.67 E-value=0.012 Score=62.51 Aligned_cols=124 Identities=17% Similarity=0.074 Sum_probs=82.1
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.+.++.|++.|+++.++|+.+...+..+-+..|+...- ..++.+.+. -..+-.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f---~~i~~~~~~------------------~~~KP~ 153 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC---AVLIGGDTL------------------AERKPH 153 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc---cEEEecCcC------------------CCCCCC
Confidence 57899999999999999999999999988888888888875321 122222110 112334
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEe---ecCC-ccH-hhhhccceEeecCCchHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIA---MGIT-GSE-VSKQTADMILMDDNFASIVLG 809 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIa---mg~~-g~~-~a~~aad~vl~~~~~~~i~~~ 809 (961)
|+--..+++.+.-..+.+.|+||+.||..|-+.|++... -|.. ..+ .....+|+++. ++..+...
T Consensus 154 p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~ 223 (229)
T PRK13226 154 PLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE--QPQLLWNP 223 (229)
T ss_pred HHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC--CHHHHHHH
Confidence 444445555555445678899999999999999987643 3311 111 22345888875 45555443
No 96
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=96.67 E-value=0.01 Score=63.69 Aligned_cols=68 Identities=24% Similarity=0.294 Sum_probs=43.8
Q ss_pred HHHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHh-----hh---hccceEeec-CCchHHHHHH
Q psy6866 744 LQKLRIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEV-----SK---QTADMILMD-DNFASIVLGI 810 (961)
Q Consensus 744 ~~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~-----a~---~aad~vl~~-~~~~~i~~~i 810 (961)
..|...|+.|+++ .+.|.++||+.||.+||..++-||.+| ++.+. .. ....+.... ..-.+|++++
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl 242 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGL 242 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHH
Confidence 5799999888764 234566799999999999999999999 66666 22 222333443 3445677776
Q ss_pred HH
Q psy6866 811 EE 812 (961)
Q Consensus 811 ~~ 812 (961)
++
T Consensus 243 ~~ 244 (247)
T PF05116_consen 243 QH 244 (247)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 97
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.65 E-value=0.015 Score=62.56 Aligned_cols=118 Identities=15% Similarity=0.127 Sum_probs=80.1
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+-....+...-+.+|+...- ..++.+.+.. ..+-.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F---d~iv~~~~~~------------------~~KP~ 166 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF---QAVIIGSECE------------------HAKPH 166 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC---cEEEecCcCC------------------CCCCC
Confidence 57889999999999999999999999999999999999985421 1233333211 12334
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEe---ecCCccHhhhhccceEeecC
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIA---MGITGSEVSKQTADMILMDD 801 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIa---mg~~g~~~a~~aad~vl~~~ 801 (961)
|+--....+.+.-..+.+.|+||+.+|+.+-++|++-.. -|....+.....+|+++.+.
T Consensus 167 p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~ 228 (248)
T PLN02770 167 PDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDY 228 (248)
T ss_pred hHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccc
Confidence 444444555554445668899999999999999987533 22111122234678887643
No 98
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=96.61 E-value=0.019 Score=71.61 Aligned_cols=60 Identities=20% Similarity=0.253 Sum_probs=45.7
Q ss_pred HHHHHHHHHHhhc--CCEEEEEcCCCCCHhhhhhC---CeeEeecCCccHhhhhccceEeecCCchHHHHHH
Q psy6866 744 LQKLRIVELYQSL--DEIVAVTGDGVNDAPALKKA---DIGIAMGITGSEVSKQTADMILMDDNFASIVLGI 810 (961)
Q Consensus 744 ~~K~~iv~~l~~~--g~~V~~vGDG~ND~~al~~A---dvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i 810 (961)
.+|+..++.+.+. .+.|+++||+.||.+||+.+ +.+|+|| ++ +.+|++.+.+. ..+...+
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~----~s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVG-PG----ESRARYRLPSQ--REVRELL 720 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEEC-CC----CCcceEeCCCH--HHHHHHH
Confidence 5788888888763 34788899999999999986 6899998 43 56788888754 4454443
No 99
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.52 E-value=0.019 Score=62.52 Aligned_cols=122 Identities=14% Similarity=0.144 Sum_probs=79.1
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++-|++.++++.|++.|+++.++|+.....+..+-+.+|+...- ..++.+.+ + ...
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F---~~vi~~~~-------------------~--~~k 197 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF---SVVQAGTP-------------------I--LSK 197 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe---EEEEecCC-------------------C--CCC
Confidence 57799999999999999999999999999999999999985421 11222211 0 011
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEe---ecCCccH-hhhhccceEeecCCchHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIA---MGITGSE-VSKQTADMILMDDNFASIVLGI 810 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIa---mg~~g~~-~a~~aad~vl~~~~~~~i~~~i 810 (961)
|+--..+++.+.-..+.++|+||+.+|+.+-++|++-.. -|....+ .....+|+++. ++..+...+
T Consensus 198 ~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~--~~~eL~~~~ 267 (273)
T PRK13225 198 RRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE--TPSDLLQAV 267 (273)
T ss_pred HHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC--CHHHHHHHH
Confidence 221122223332234568899999999999999987643 2311111 22345888874 566665543
No 100
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.46 E-value=0.019 Score=60.39 Aligned_cols=97 Identities=30% Similarity=0.313 Sum_probs=69.2
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC--CCCCCCceeEechhhccCCHHHHHHHHHhcCceEEee
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHIL--SETSSDDNVFTGTDLRKITDEELKDILETNKELVFAR 740 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~--~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar 740 (961)
++.+|+.+.++.|++.|+++.++|+-....+..+.+..|+. ... ..++.+.+.. ..+
T Consensus 87 ~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f---~~i~~~~~~~------------------~~K 145 (220)
T TIGR03351 87 VALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV---DAVVCPSDVA------------------AGR 145 (220)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC---CEEEcCCcCC------------------CCC
Confidence 78999999999999999999999999999999999999985 211 1222222210 112
Q ss_pred cCHHHHHHHHHHHhhc-CCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 741 TSPLQKLRIVELYQSL-DEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 741 ~~p~~K~~iv~~l~~~-g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
-.|+-=...++.+.-. .+.++|+||+.+|..+-++|++..
T Consensus 146 P~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 146 PAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred CCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCe
Confidence 2333323333333322 357899999999999999999986
No 101
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.44 E-value=0.025 Score=57.14 Aligned_cols=142 Identities=20% Similarity=0.267 Sum_probs=89.6
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC-Cc------eeEechh---------hccCCHHHH
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS-DD------NVFTGTD---------LRKITDEEL 726 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~-~~------~v~~g~~---------~~~~~~~~~ 726 (961)
++-|++.++++.|++. ...+++|---.+-+..+|.-+|+...+.. .. .+-++.- ...++.+++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 5679999999999876 44555666667778899999998543221 00 0111100 001122222
Q ss_pred HHHHHhcCceEEeecCHHHHHHHH---------------HHHhhc---CCEEEEEcCCCCCHhhhhhCC----eeEeecC
Q psy6866 727 KDILETNKELVFARTSPLQKLRIV---------------ELYQSL---DEIVAVTGDGVNDAPALKKAD----IGIAMGI 784 (961)
Q Consensus 727 ~~~~~~~~~~v~ar~~p~~K~~iv---------------~~l~~~---g~~V~~vGDG~ND~~al~~Ad----vGIamg~ 784 (961)
-+-+. .+|.|..|.+-.+++ +.+-+. ....+++||++.|..||+.+. +.||.
T Consensus 162 fe~lD----e~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaF-- 235 (315)
T COG4030 162 FEKLD----ELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAF-- 235 (315)
T ss_pred HHHHH----HHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEe--
Confidence 22111 157777775444444 443332 334678899999999998863 44554
Q ss_pred CccHhhhhccceEeecCCchHHHHHHH
Q psy6866 785 TGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 785 ~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
||.+-|...||+.+.+.+..+....|+
T Consensus 236 NGNeYal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 236 NGNEYALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cCCcccccccceEEeccchhhhhHHHH
Confidence 799999999999999998888776665
No 102
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.43 E-value=0.016 Score=62.64 Aligned_cols=116 Identities=12% Similarity=0.081 Sum_probs=77.0
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.+++.++++.|++.|+++.++|+.....+..+-+.+|+...- ..++.+.+.. ..+-.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F---d~ii~~~d~~------------------~~KP~ 167 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF---SVVLAAEDVY------------------RGKPD 167 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC---cEEEecccCC------------------CCCCC
Confidence 56899999999999999999999999999999999999985421 2233333211 12333
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEe-ecCCccHhhhhccceEee
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIA-MGITGSEVSKQTADMILM 799 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIa-mg~~g~~~a~~aad~vl~ 799 (961)
|+-=...++.+.-..+.++|+||..+|+.|-++|++-.. +...+.......+|+++.
T Consensus 168 Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~ 225 (260)
T PLN03243 168 PEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVR 225 (260)
T ss_pred HHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeC
Confidence 433334444444444568889999999999999998432 210222222234676654
No 103
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.35 E-value=0.012 Score=60.80 Aligned_cols=93 Identities=17% Similarity=0.066 Sum_probs=67.1
Q ss_pred CCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeec
Q psy6866 662 DPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFART 741 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~ 741 (961)
+++.+.+.++++.|++.|+++.++||.....+..+-+.+|+...- ..++.+.+ +..+-
T Consensus 105 ~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f---~~~~~~~~-------------------~~~KP 162 (197)
T TIGR01548 105 DETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF---PVQIWMED-------------------CPPKP 162 (197)
T ss_pred cccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC---CEEEeecC-------------------CCCCc
Confidence 456777899999999999999999999999999999999985421 11222211 12244
Q ss_pred CHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhC
Q psy6866 742 SPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKA 776 (961)
Q Consensus 742 ~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~A 776 (961)
.|+--..+++.+.-..+.++|+||+.+|+.+-++|
T Consensus 163 ~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 163 NPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred CHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 55554555666655556788999999999886654
No 104
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.31 E-value=0.034 Score=60.43 Aligned_cols=101 Identities=20% Similarity=0.189 Sum_probs=67.4
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++-|++.++++.|++.|+++.++||.....+..+-+..|+..... ..++.+.+. -..+-.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~--d~i~~~~~~------------------~~~KP~ 160 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP--DHVVTTDDV------------------PAGRPY 160 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc--eEEEcCCcC------------------CCCCCC
Confidence 567899999999999999999999999988887777776643210 122222211 112233
Q ss_pred HHHHHHHHHHHhhc-CCEEEEEcCCCCCHhhhhhCCe---eEeec
Q psy6866 743 PLQKLRIVELYQSL-DEIVAVTGDGVNDAPALKKADI---GIAMG 783 (961)
Q Consensus 743 p~~K~~iv~~l~~~-g~~V~~vGDG~ND~~al~~Adv---GIamg 783 (961)
|+-=....+.+.-. .+.++||||+.+|+.+-+.|++ |+.-|
T Consensus 161 p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g 205 (267)
T PRK13478 161 PWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILS 205 (267)
T ss_pred hHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccC
Confidence 33333344444322 2568899999999999999996 55544
No 105
>PRK11587 putative phosphatase; Provisional
Probab=96.29 E-value=0.032 Score=58.63 Aligned_cols=114 Identities=17% Similarity=0.108 Sum_probs=73.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|+++|+++.++|+.....+...-+..|+... ..++.+.+. -..+-.
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~----~~i~~~~~~------------------~~~KP~ 140 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP----EVFVTAERV------------------KRGKPE 140 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc----cEEEEHHHh------------------cCCCCC
Confidence 5789999999999999999999999887766666666776321 123333211 112233
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCee-EeecCCcc-HhhhhccceEee
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIG-IAMGITGS-EVSKQTADMILM 799 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvG-Iamg~~g~-~~a~~aad~vl~ 799 (961)
|+--....+.+.-..+.+.|+||..+|+.+-+.|++- |++. .+. ......+|+++.
T Consensus 141 p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 141 PDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVLH 198 (218)
T ss_pred cHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEec
Confidence 4333444444444456788999999999999999984 4443 222 222335677654
No 106
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.23 E-value=0.036 Score=59.71 Aligned_cols=97 Identities=21% Similarity=0.194 Sum_probs=67.8
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+.....+..+-++.|+..... ..++.+.+. -..+-.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~--d~ii~~~~~------------------~~~KP~ 158 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP--DYNVTTDDV------------------PAGRPA 158 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC--ceEEccccC------------------CCCCCC
Confidence 467999999999999999999999999999999888888754210 122222211 112334
Q ss_pred HHHHHHHHHHHhhc-CCEEEEEcCCCCCHhhhhhCCee
Q psy6866 743 PLQKLRIVELYQSL-DEIVAVTGDGVNDAPALKKADIG 779 (961)
Q Consensus 743 p~~K~~iv~~l~~~-g~~V~~vGDG~ND~~al~~AdvG 779 (961)
|+-=...++.+.-. .+.++||||..+|+.+-+.|++-
T Consensus 159 p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 159 PWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 44334444444422 34588999999999999999964
No 107
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.18 E-value=0.0084 Score=63.44 Aligned_cols=88 Identities=26% Similarity=0.330 Sum_probs=60.8
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCC----CHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEe
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGD----HPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFA 739 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD----~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~a 739 (961)
+.+++.+.++.+++.|+++.++|+. ...++..+.+.+|+.... ..++.+.+..
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f---~~i~~~d~~~-------------------- 171 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN---PVIFAGDKPG-------------------- 171 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe---eEEECCCCCC--------------------
Confidence 4445999999999999999999998 677999999999995421 1222222110
Q ss_pred ecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCee
Q psy6866 740 RTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIG 779 (961)
Q Consensus 740 r~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvG 779 (961)
...| +|. ..+++.+ .+.|+||..||..+-+.|++-
T Consensus 172 ~~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 172 QYQY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CCCC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 0112 132 2344444 468899999999999988764
No 108
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.12 E-value=0.01 Score=62.81 Aligned_cols=88 Identities=25% Similarity=0.328 Sum_probs=62.1
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCC----HHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEE
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDH----PCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVF 738 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~----~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ 738 (961)
.+.+++.+.++.+++.|+++.++||+. ..++..+.+..|+...... .. ++
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f-~v-------------------------il 167 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMN-PV-------------------------IF 167 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccce-eE-------------------------EE
Confidence 477889999999999999999999964 6688999998999322111 12 22
Q ss_pred eecCH--HHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 739 ARTSP--LQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 739 ar~~p--~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
+.-++ .+|.. .+++.+ .++|+||..+|..+-+.|++-.
T Consensus 168 ~gd~~~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~~ 207 (237)
T PRK11009 168 AGDKPGQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGARG 207 (237)
T ss_pred cCCCCCCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCcE
Confidence 22211 23433 334444 4778999999999999998753
No 109
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.08 E-value=0.01 Score=58.19 Aligned_cols=109 Identities=16% Similarity=0.161 Sum_probs=72.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
.++|+.++.++.+++.+++++++|+-...-...+-...+=-....+ ..++........+. ...+++..-+
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~-idi~sn~~~ih~dg---------~h~i~~~~ds 142 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYC-IDIVSNNDYIHIDG---------QHSIKYTDDS 142 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceee-eEEeecCceEcCCC---------ceeeecCCcc
Confidence 5889999999999999999999998877766666665541110000 01111111000000 0001222222
Q ss_pred H--HHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEe
Q psy6866 743 P--LQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIA 781 (961)
Q Consensus 743 p--~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIa 781 (961)
+ .+|...|+.+++..+.+.+||||+.|..|-+.+|+=+|
T Consensus 143 ~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 143 QFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred ccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 2 68999999999999999999999999999998888875
No 110
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=95.89 E-value=0.034 Score=55.12 Aligned_cols=103 Identities=14% Similarity=0.175 Sum_probs=66.2
Q ss_pred cCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHH---HHHHHc---C--CCCCCCCCceeEe-chhhccCCHHHHHHHHH
Q psy6866 661 YDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAK---AIAIKC---H--ILSETSSDDNVFT-GTDLRKITDEELKDILE 731 (961)
Q Consensus 661 ~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~---~ia~~~---g--i~~~~~~~~~v~~-g~~~~~~~~~~~~~~~~ 731 (961)
+|.+.+++.+++++++++|++++++||+....+. ....++ | +.. ..++.. |..+....
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~----g~li~~~g~~~~~~~--------- 91 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH----GPVLLSPDRLFAALH--------- 91 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC----ceEEEcCCcchhhhh---------
Confidence 4788999999999999999999999999988874 444442 2 221 012222 21111100
Q ss_pred hcCceEEeecCHHHHHHHHHHHhh-----cCCEEEEEcCCCCCHhhhhhCCee
Q psy6866 732 TNKELVFARTSPLQKLRIVELYQS-----LDEIVAVTGDGVNDAPALKKADIG 779 (961)
Q Consensus 732 ~~~~~v~ar~~p~~K~~iv~~l~~-----~g~~V~~vGDG~ND~~al~~AdvG 779 (961)
.+ +..+-.-+.|...++.+.+ ....++..||+.+|+.+.++++|-
T Consensus 92 --~e-~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 92 --RE-VISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred --cc-cccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 00 2222222348778877766 346777789999999998877553
No 111
>PRK06769 hypothetical protein; Validated
Probab=95.88 E-value=0.045 Score=55.26 Aligned_cols=99 Identities=13% Similarity=0.003 Sum_probs=59.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHH--------HHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPC--------TAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNK 734 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~--------ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~ 734 (961)
++-|++.++++.|++.|+++.++|+.... .+....+..|+.. ++.+.... ..
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~-------~~~~~~~~-------------~~ 87 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDD-------IYLCPHKH-------------GD 87 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCE-------EEECcCCC-------------CC
Confidence 36899999999999999999999987631 1222334455532 11100000 00
Q ss_pred ceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEe
Q psy6866 735 ELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIA 781 (961)
Q Consensus 735 ~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIa 781 (961)
..-..+-.|+-=..+++.+.-.-+.+.|+||..+|+.+=++|++-..
T Consensus 88 ~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 88 GCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 00012333433344445444334568899999999999999987654
No 112
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=95.86 E-value=0.063 Score=54.60 Aligned_cols=99 Identities=18% Similarity=0.132 Sum_probs=58.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHH
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHP---------------CTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELK 727 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~---------------~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~ 727 (961)
.+.|++.++++.|++.|+++.++|..+. .....+-+..|+... .++.......
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~-----~i~~~~~~~~------- 96 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD-----GIYYCPHHPE------- 96 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc-----eEEECCCCCC-------
Confidence 4689999999999999999999998762 111222334454210 1111000000
Q ss_pred HHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCee
Q psy6866 728 DILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIG 779 (961)
Q Consensus 728 ~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvG 779 (961)
...-..+-.|+--..+++.+.-..+.++|+||+.+|+.+-+.|++.
T Consensus 97 ------~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~ 142 (181)
T PRK08942 97 ------DGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVT 142 (181)
T ss_pred ------CCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCe
Confidence 0001123334444445555544456788999999999999999974
No 113
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=95.77 E-value=0.057 Score=63.59 Aligned_cols=122 Identities=15% Similarity=0.140 Sum_probs=79.2
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.+.++.|++.|+++.++|+-....+..+.+.+|+...- ..++.+.+.. ....
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f---~~i~~~d~v~-------------------~~~k 387 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV---TETFSIEQIN-------------------SLNK 387 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc---ceeEecCCCC-------------------CCCC
Confidence 68899999999999999999999999999999999999985421 1223332211 1123
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCee-EeecC-CccHhhhhccceEeecCCchHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIG-IAMGI-TGSEVSKQTADMILMDDNFASIVLGI 810 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvG-Iamg~-~g~~~a~~aad~vl~~~~~~~i~~~i 810 (961)
|+--...++.+. -+.+.++||+.+|+.+-+.|++- |.+.- .+.+.....+|+++. ++..+...+
T Consensus 388 P~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l 453 (459)
T PRK06698 388 SDLVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGIL 453 (459)
T ss_pred cHHHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHH
Confidence 332222222222 24688999999999999999974 33321 122222345788875 556665544
No 114
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=95.74 E-value=0.06 Score=51.53 Aligned_cols=92 Identities=21% Similarity=0.225 Sum_probs=63.4
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCC--------HHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDH--------PCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNK 734 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~--------~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~ 734 (961)
++.+++.++++.|+++|+++.++|+.. ......+.+.+|+... .....+ .
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~----~~~~~~-~----------------- 82 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID----VLYACP-H----------------- 82 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE----EEEECC-C-----------------
Confidence 678999999999999999999999988 7777888888887421 111111 0
Q ss_pred ceEEeecCHHHHHHHHHHHh-hcCCEEEEEcC-CCCCHhhhhhCCee
Q psy6866 735 ELVFARTSPLQKLRIVELYQ-SLDEIVAVTGD-GVNDAPALKKADIG 779 (961)
Q Consensus 735 ~~v~ar~~p~~K~~iv~~l~-~~g~~V~~vGD-G~ND~~al~~AdvG 779 (961)
..+-.|+-=..+++.++ -..+.++|+|| ..+|+.+-+.|++-
T Consensus 83 ---~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 83 ---CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred ---CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 01222333334444442 34467889999 58999999988764
No 115
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=95.69 E-value=0.044 Score=56.52 Aligned_cols=97 Identities=19% Similarity=0.259 Sum_probs=65.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+-+......+.+.+|+...- ..++...+. -..+-.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f---d~i~~s~~~------------------~~~KP~ 150 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF---DAVLSADAV------------------RAYKPA 150 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh---heeEehhhc------------------CCCCCC
Confidence 57899999999999999999999999988888888999974321 112222110 011222
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
|+-=..+.+.+.-.-+.+.++||+.+|+.+-++|++-.
T Consensus 151 ~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 151 PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 32223333444333456889999999999988888754
No 116
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.61 E-value=0.059 Score=59.16 Aligned_cols=118 Identities=20% Similarity=0.169 Sum_probs=73.6
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.+.++.|++.|+++.++|+-+......+-+..+..... ....++.+.+. -..+-.
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~-~~~~~v~~~~~------------------~~~KP~ 204 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERA-QGLDVFAGDDV------------------PKKKPD 204 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcccccc-CceEEEecccc------------------CCCCCC
Confidence 57899999999999999999999998888777665555321110 00112222211 012333
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCcc--HhhhhccceEee
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGS--EVSKQTADMILM 799 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~--~~a~~aad~vl~ 799 (961)
|+-=..+.+.+.-..+.++||||+.+|+.|-++|++....-..|. ......+|+++.
T Consensus 205 p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~ 263 (286)
T PLN02779 205 PDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD 263 (286)
T ss_pred HHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC
Confidence 433344445554445568899999999999999997765432332 111235788774
No 117
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=95.43 E-value=0.059 Score=56.89 Aligned_cols=97 Identities=14% Similarity=0.090 Sum_probs=65.1
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
.+.|++.+.++.|++.|+++.++|+-....+...-+..|+...- ..++.+.+.. ..+-.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f---d~iv~s~~~~------------------~~KP~ 151 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL---DLLLSTHTFG------------------YPKED 151 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC---CEEEEeeeCC------------------CCCCC
Confidence 57899999999999999999999998888888877778874321 1122221110 01122
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
|+-=..+.+.+.-..+.++|+||..+|+.+-+.|++..
T Consensus 152 p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 152 QRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 22222333333333456889999999999999999963
No 118
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=95.36 E-value=0.037 Score=58.22 Aligned_cols=112 Identities=20% Similarity=0.285 Sum_probs=70.4
Q ss_pred CCCCChHHHHHHH--HHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEee
Q psy6866 663 PPRPAVPDAIDAC--HKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFAR 740 (961)
Q Consensus 663 ~lr~~~~~~I~~l--~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar 740 (961)
|+.|+.+++++.+ ++.|+.+.++|.-|..--..+-+.-|+...- ..+++....-.-+. .+ .+.+.. ..-+.+
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f---~~I~TNpa~~~~~G-~l-~v~pyh-~h~C~~ 144 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCF---SEIFTNPACFDADG-RL-RVRPYH-SHGCSL 144 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcccc---ceEEeCCceecCCc-eE-EEeCcc-CCCCCc
Confidence 6788999999999 5689999999999999999998998885321 12222211100000 00 000000 012234
Q ss_pred cCH-HHHHHHHHHHhhc----C---CEEEEEcCCCCC-Hhhhh--hCCeeE
Q psy6866 741 TSP-LQKLRIVELYQSL----D---EIVAVTGDGVND-APALK--KADIGI 780 (961)
Q Consensus 741 ~~p-~~K~~iv~~l~~~----g---~~V~~vGDG~ND-~~al~--~AdvGI 780 (961)
+.| .=|..+++.+++. | +.|.++|||.|| ||+++ .+|+-.
T Consensus 145 C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~ 195 (234)
T PF06888_consen 145 CPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVF 195 (234)
T ss_pred CCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEe
Confidence 444 4799999888764 4 689999999999 45543 455544
No 119
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=95.31 E-value=0.053 Score=60.04 Aligned_cols=109 Identities=13% Similarity=0.076 Sum_probs=76.1
Q ss_pred eecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEE
Q psy6866 659 SLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVF 738 (961)
Q Consensus 659 ~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ 738 (961)
...+++.+++.++++.|++.|++++++||.....+..+.+.+|+..... ..+.|.+ .....+... --
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f---~~i~~~~-------~~~~~~~~~---~~ 249 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF---DDLIGRP-------PDMHFQREQ---GD 249 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch---hhhhCCc-------chhhhcccC---CC
Confidence 3577999999999999999999999999999999999999988853110 0011111 000000000 01
Q ss_pred eecCHHHHHHHHHHHhh-cCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 739 ARTSPLQKLRIVELYQS-LDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 739 ar~~p~~K~~iv~~l~~-~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
-+-.|+-+...++.+.. .-+.++|+||..+|+.+-+.|++-.
T Consensus 250 ~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 250 KRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred CCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 25566777777766544 3367889999999999999999875
No 120
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=95.26 E-value=0.069 Score=56.09 Aligned_cols=97 Identities=16% Similarity=0.174 Sum_probs=65.8
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+-....+....+.+|+...- ..++.+.+.. ..+-.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f---~~i~~~~~~~------------------~~KP~ 152 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF---DAVITSEEEG------------------VEKPH 152 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc---cEEEEeccCC------------------CCCCC
Confidence 57899999999999999999999999888888888888874321 1122221110 11223
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCC-CCHhhhhhCCeeE
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGV-NDAPALKKADIGI 780 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~-ND~~al~~AdvGI 780 (961)
|+-=..+.+.+.-..+.+.|+||.. +|+.+-++|++-.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~ 191 (221)
T TIGR02253 153 PKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKT 191 (221)
T ss_pred HHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEE
Confidence 3322333344433345688999998 9999999998743
No 121
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=95.11 E-value=0.052 Score=55.19 Aligned_cols=95 Identities=15% Similarity=0.151 Sum_probs=60.6
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|+++|+++.++|+... +....+.+|+...- ..++.+.+. -..+-.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f---~~~~~~~~~------------------~~~kp~ 143 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF---DAIVDPAEI------------------KKGKPD 143 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC---cEEEehhhc------------------CCCCCC
Confidence 5789999999999999999999997532 35567777774321 122222211 112233
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
|+-=....+.+.-..+.+.||||+.+|+.+-+.|++-.
T Consensus 144 p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 144 PEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEE
Confidence 33223333333323345788999999999999998753
No 122
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=95.10 E-value=0.11 Score=52.29 Aligned_cols=111 Identities=11% Similarity=0.007 Sum_probs=69.9
Q ss_pred EEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCC-CHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHh
Q psy6866 654 LIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGD-HPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILET 732 (961)
Q Consensus 654 ~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD-~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~ 732 (961)
.....+-+-++.|++.++++.|+++|+++.++|+- ....+..+-..+|+....... .+...
T Consensus 36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~------------------~~~~~ 97 (174)
T TIGR01685 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTV------------------PMHSL 97 (174)
T ss_pred EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcc------------------cHHHh
Confidence 33444445578999999999999999999999976 888888888888874111000 00000
Q ss_pred cCceEEeecCHHHH--HHHHHHHhhc------CCEEEEEcCCCCCHhhhhhCCeeEee
Q psy6866 733 NKELVFARTSPLQK--LRIVELYQSL------DEIVAVTGDGVNDAPALKKADIGIAM 782 (961)
Q Consensus 733 ~~~~v~ar~~p~~K--~~iv~~l~~~------g~~V~~vGDG~ND~~al~~AdvGIam 782 (961)
....+.+.-.+..| ..+.+.+.+. -+.++|+||...|+.+-++|++-.+.
T Consensus 98 Fd~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 98 FDDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred ceeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 01112222111112 2334444322 25688999999999999999886653
No 123
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=95.02 E-value=0.099 Score=52.87 Aligned_cols=94 Identities=17% Similarity=0.143 Sum_probs=62.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+-.... ..+..++|+...- ..++.+.+. -..+-.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f---~~i~~~~~~------------------~~~KP~ 142 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF---DVVIFSGDV------------------GRGKPD 142 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC---CEEEEcCCC------------------CCCCCC
Confidence 678999999999999999999999988777 5555558874321 112222110 112223
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCe
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADI 778 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~Adv 778 (961)
|+--..+.+.+.-..+.+.++||...|+.+-++|++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 143 PDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 333344444444445678899999999999888876
No 124
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=95.01 E-value=0.15 Score=57.54 Aligned_cols=115 Identities=13% Similarity=0.119 Sum_probs=77.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.||+.++++.|++.|+++.++|+-....+..+-+..||...- ..++.+.+.. ...-.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF---d~Iv~sddv~------------------~~KP~ 274 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF---SVIVAAEDVY------------------RGKPD 274 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc---eEEEecCcCC------------------CCCCC
Confidence 46799999999999999999999999999999999999985421 1222222110 11233
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCc-cHhh-hhccceEee
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITG-SEVS-KQTADMILM 799 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g-~~~a-~~aad~vl~ 799 (961)
|+-=...++.+.-..+.++|+||..+|+.|-+.|++-.. +... .... ...||+++.
T Consensus 275 Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~I-gV~~~~~~~~l~~Ad~iI~ 332 (381)
T PLN02575 275 PEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCV-AVASKHPIYELGAADLVVR 332 (381)
T ss_pred HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEE-EECCCCChhHhcCCCEEEC
Confidence 443444555555456678899999999999999998543 3222 2111 234777764
No 125
>PTZ00174 phosphomannomutase; Provisional
Probab=94.96 E-value=0.018 Score=61.89 Aligned_cols=54 Identities=19% Similarity=0.209 Sum_probs=44.0
Q ss_pred HHHHHHHHHHhhcCCEEEEEcC----CCCCHhhhhhC-CeeEeecCCccHhhhhccceEe
Q psy6866 744 LQKLRIVELYQSLDEIVAVTGD----GVNDAPALKKA-DIGIAMGITGSEVSKQTADMIL 798 (961)
Q Consensus 744 ~~K~~iv~~l~~~g~~V~~vGD----G~ND~~al~~A-dvGIamg~~g~~~a~~aad~vl 798 (961)
.+|+.-++.|.+..+.|+++|| |.||.+||+.| -.|++++ ++.+.+|..|.+++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHhc
Confidence 5899999999877677778899 99999999976 5677777 88888888776544
No 126
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=94.79 E-value=0.26 Score=50.06 Aligned_cols=37 Identities=11% Similarity=0.144 Sum_probs=33.7
Q ss_pred ChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy6866 667 AVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHIL 703 (961)
Q Consensus 667 ~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~ 703 (961)
.+.+.+.+|+++|++|+.+|.-....-...-+++|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 3678899999999999999999999999999999986
No 127
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=94.68 E-value=0.064 Score=53.45 Aligned_cols=97 Identities=20% Similarity=0.270 Sum_probs=68.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.+++.+.++.|++.|++++++|+..........+.+|+...- ..++...+.. ..+-.
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f---~~i~~~~~~~------------------~~Kp~ 135 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYF---DEIISSDDVG------------------SRKPD 135 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGC---SEEEEGGGSS------------------SSTTS
T ss_pred chhhhhhhhhhhcccccceeEEeecCCccccccccccccccccc---ccccccchhh------------------hhhhH
Confidence 67899999999999999999999999999999999999986211 1222222111 01222
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
|+-=..+++.+.-..+.+.+|||+..|+.+-+.|++--
T Consensus 136 ~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 136 PDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp HHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 33334455555444567889999999999999887643
No 128
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=94.68 E-value=0.15 Score=53.46 Aligned_cols=94 Identities=17% Similarity=0.156 Sum_probs=63.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++. +++.++|+-....+..+.+++|+...- ..++.+.+. -..+-.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f---d~i~~~~~~------------------~~~KP~ 154 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF---DDIFVSEDA------------------GIQKPD 154 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc---CEEEEcCcc------------------CCCCCC
Confidence 5789999999999999 999999999998888888999885421 112211110 011223
Q ss_pred HHHHHHHHHHH-hhcCCEEEEEcCCC-CCHhhhhhCCe
Q psy6866 743 PLQKLRIVELY-QSLDEIVAVTGDGV-NDAPALKKADI 778 (961)
Q Consensus 743 p~~K~~iv~~l-~~~g~~V~~vGDG~-ND~~al~~Adv 778 (961)
|+-=...++.+ .-..+.++||||+. +|+.+=+.+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~ 192 (224)
T TIGR02254 155 KEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGL 192 (224)
T ss_pred HHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCC
Confidence 32223334444 32335688999998 89999999996
No 129
>PRK09449 dUMP phosphatase; Provisional
Probab=94.60 E-value=0.34 Score=50.93 Aligned_cols=123 Identities=12% Similarity=0.089 Sum_probs=73.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|+ .|+++.++|......+...-+..|+...- ..++.+.+. -..+-.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f---d~v~~~~~~------------------~~~KP~ 152 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF---DLLVISEQV------------------GVAKPD 152 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc---CEEEEECcc------------------CCCCCC
Confidence 47899999999999 68999999998888888877888874311 111111110 011223
Q ss_pred HHHHHHHHHHHhh-cCCEEEEEcCCC-CCHhhhhhCCeeE-eecCCccH-hhhhccceEeecCCchHHHHH
Q psy6866 743 PLQKLRIVELYQS-LDEIVAVTGDGV-NDAPALKKADIGI-AMGITGSE-VSKQTADMILMDDNFASIVLG 809 (961)
Q Consensus 743 p~~K~~iv~~l~~-~g~~V~~vGDG~-ND~~al~~AdvGI-amg~~g~~-~a~~aad~vl~~~~~~~i~~~ 809 (961)
|+-=..+++.+.- ..+.+.+|||+. +|+.+=++|++-. .+...+.+ .....+|+++. ++..+...
T Consensus 153 p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~--~~~el~~~ 221 (224)
T PRK09449 153 VAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVS--SLSELEQL 221 (224)
T ss_pred HHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEEC--CHHHHHHH
Confidence 3322333444432 235688999998 7999999999853 33211211 11124677664 45555543
No 130
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=94.52 E-value=0.11 Score=52.38 Aligned_cols=86 Identities=22% Similarity=0.187 Sum_probs=60.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCC-HHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEE--e
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDH-PCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVF--A 739 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~-~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~--a 739 (961)
.+-+++.++++.|++.|+++.++|+.+ ...+..+.+.+|+.. .+ .
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~--------------------------------~~~~~ 90 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV--------------------------------LPHAV 90 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE--------------------------------EcCCC
Confidence 577899999999999999999999987 577777878887632 11 1
Q ss_pred ecCHHHHHHHHHHHhhcCCEEEEEcCCC-CCHhhhhhCCeeE
Q psy6866 740 RTSPLQKLRIVELYQSLDEIVAVTGDGV-NDAPALKKADIGI 780 (961)
Q Consensus 740 r~~p~~K~~iv~~l~~~g~~V~~vGDG~-ND~~al~~AdvGI 780 (961)
+-.|+-=..+.+.+.-..+.++||||.. .|..+-+.|++-.
T Consensus 91 KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~ 132 (170)
T TIGR01668 91 KPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYT 132 (170)
T ss_pred CCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeE
Confidence 2223222223333332345688999998 7999999988743
No 131
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=94.42 E-value=0.089 Score=53.44 Aligned_cols=95 Identities=18% Similarity=0.157 Sum_probs=60.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+. ..+..+-+.+|+...- ..++.+.+. -..+..
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f---~~v~~~~~~------------------~~~kp~ 144 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF---DAIVDADEV------------------KEGKPH 144 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC---CEeeehhhC------------------CCCCCC
Confidence 68999999999999999999999987 5567777788874311 111111110 011122
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
|+-=..+.+.+.-..+.+.++||+.+|+.+-+.|++..
T Consensus 145 ~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 145 PETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeE
Confidence 22112223333223356778999999999999998753
No 132
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=94.34 E-value=0.23 Score=50.18 Aligned_cols=27 Identities=26% Similarity=0.311 Sum_probs=24.4
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDH 689 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~ 689 (961)
++.|++.++|+.|+++|+++.++|.-+
T Consensus 26 ~~~pgv~e~L~~Lk~~G~~l~i~TN~~ 52 (176)
T TIGR00213 26 EFIDGVIDALRELKKMGYALVLVTNQS 52 (176)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 357899999999999999999999765
No 133
>PLN02940 riboflavin kinase
Probab=94.19 E-value=0.19 Score=57.62 Aligned_cols=97 Identities=13% Similarity=0.097 Sum_probs=65.8
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH-HcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeec
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAI-KCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFART 741 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~-~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~ 741 (961)
++.|++.++++.|++.|+++.++|+.....+...-+ ..|+...- ..++.+.+. -..+-
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F---d~ii~~d~v------------------~~~KP 151 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF---SVIVGGDEV------------------EKGKP 151 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC---CEEEehhhc------------------CCCCC
Confidence 467999999999999999999999998888776654 56763311 122222211 11233
Q ss_pred CHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 742 SPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 742 ~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
.|+-=..+++.+.-..+.+.|+||+.+|+.+-+.|++..
T Consensus 152 ~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~ 190 (382)
T PLN02940 152 SPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEV 190 (382)
T ss_pred CHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEE
Confidence 333334444444434567888999999999999999864
No 134
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=93.72 E-value=0.3 Score=52.67 Aligned_cols=85 Identities=15% Similarity=0.153 Sum_probs=58.6
Q ss_pred CCCCCChHHHHHHHHHcCCEEEEEcCCCHH---HHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEE
Q psy6866 662 DPPRPAVPDAIDACHKAGIRVIMVTGDHPC---TAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVF 738 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~v~m~TGD~~~---ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ 738 (961)
.++-|++.+.++.+++.|+++.++|+.... .+...-++.|+..... +.++
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~---------------------------d~ll 169 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE---------------------------EHLL 169 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc---------------------------ceEE
Confidence 467899999999999999999999998743 3334556678753211 1134
Q ss_pred eecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhh
Q psy6866 739 ARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPAL 773 (961)
Q Consensus 739 ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al 773 (961)
.|-....|..-.+.+.+.-.+++++||-.+|....
T Consensus 170 lr~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 170 LKKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred eCCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 44332345555556655556799999999998654
No 135
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=93.57 E-value=0.21 Score=48.91 Aligned_cols=100 Identities=17% Similarity=0.164 Sum_probs=58.2
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHH
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHP---------------CTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELK 727 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~---------------~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~ 727 (961)
++.|++.++++.|++.|+++.++|.... .....+.+.+|+... ..+.......
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~------- 94 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD-----GVLFCPHHPA------- 94 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee-----EEEECCCCCC-------
Confidence 4789999999999999999999998662 344556677777421 0000000000
Q ss_pred HHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 728 DILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 728 ~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
...-..+-.|+-=..+++.+.-..+.+.||||...|+.+-+.|++-.
T Consensus 95 ------~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 95 ------DNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 00000111222112222333223356889999999999988887754
No 136
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=93.41 E-value=0.27 Score=50.86 Aligned_cols=95 Identities=15% Similarity=0.100 Sum_probs=59.2
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++-|++.++++.|++.|+++.++|+-... .....+.+|+...- ..++...+. -..+-+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f---d~i~~s~~~------------------~~~KP~ 162 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF---DFVVTSYEV------------------GAEKPD 162 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc---ceEEeeccc------------------CCCCCC
Confidence 57799999999999999999999976543 46666777773311 111111110 011223
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCC-CCHhhhhhCCee
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGV-NDAPALKKADIG 779 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~-ND~~al~~AdvG 779 (961)
|+-=..+++.+.-..+.++||||+. +|+.+-++|++-
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 163 PKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 3222233333333346788999997 899988888753
No 137
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=93.19 E-value=0.26 Score=48.36 Aligned_cols=90 Identities=19% Similarity=0.174 Sum_probs=57.7
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCH
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSP 743 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p 743 (961)
..+++.+.++.|++.|+++.++|+-....+....+.. +.... ..++...+ +..+-.|
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f---~~i~~~~~-------------------~~~Kp~~ 121 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYF---DLILGSDE-------------------FGAKPEP 121 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcC---cEEEecCC-------------------CCCCcCH
Confidence 3478999999999999999999999988888877765 32210 11111110 1122333
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCC
Q psy6866 744 LQKLRIVELYQSLDEIVAVTGDGVNDAPALKKAD 777 (961)
Q Consensus 744 ~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~Ad 777 (961)
+-=..+.+.+.-.. .++++||..+|+.+-++|+
T Consensus 122 ~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 122 EIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 33333333333334 6889999999999877764
No 138
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=93.15 E-value=0.88 Score=48.61 Aligned_cols=49 Identities=14% Similarity=0.083 Sum_probs=38.0
Q ss_pred eeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHH--HHHHHcCCCC
Q psy6866 656 GLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAK--AIAIKCHILS 704 (961)
Q Consensus 656 G~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~--~ia~~~gi~~ 704 (961)
|.+.-.+.+-|++.++++.|+++|+++.++|.-....+. ...+++|+..
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~ 67 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINA 67 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCc
Confidence 445556778999999999999999999999986554433 4567888853
No 139
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=93.13 E-value=0.22 Score=49.63 Aligned_cols=97 Identities=16% Similarity=0.037 Sum_probs=58.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCC---------------HHHHHHHHHHcCCCCCCCCCceeEe----chhhccCCH
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDH---------------PCTAKAIAIKCHILSETSSDDNVFT----GTDLRKITD 723 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~---------------~~ta~~ia~~~gi~~~~~~~~~v~~----g~~~~~~~~ 723 (961)
++-|++.++++.|++.|+++.++|.-. ...+..+.+++|+.-. ..++. ..+.
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd----~ii~~~~~~~~~~----- 99 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFD----DVLICPHFPDDNC----- 99 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCcee----EEEECCCCCCCCC-----
Confidence 567899999999999999999999742 3355666777777310 11111 0000
Q ss_pred HHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEe
Q psy6866 724 EELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIA 781 (961)
Q Consensus 724 ~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIa 781 (961)
-...-.|+-=..+++.+.-..+.+.||||+.+|..+-+.|++-..
T Consensus 100 -------------~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 100 -------------DCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred -------------CCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 011111221122222222223468899999999999999988654
No 140
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=92.78 E-value=0.31 Score=47.62 Aligned_cols=83 Identities=18% Similarity=0.302 Sum_probs=62.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
..-|++++-++.++++|+++.++|.-+...+...+..+|+.. ++--..
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~f--------------------------------i~~A~K 93 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPF--------------------------------IYRAKK 93 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCce--------------------------------eecccC
Confidence 466788999999999999999999999999999999999953 454555
Q ss_pred HHHHHHHHHHHhh---cCCEEEEEcCCC-CCHhhhhhCCe
Q psy6866 743 PLQKLRIVELYQS---LDEIVAVTGDGV-NDAPALKKADI 778 (961)
Q Consensus 743 p~~K~~iv~~l~~---~g~~V~~vGDG~-ND~~al~~Adv 778 (961)
|..+ .+-+++++ .-+.|+||||-. .|+-+=+.|++
T Consensus 94 P~~~-~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 94 PFGR-AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred ccHH-HHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 6544 33444444 456899999986 57766555543
No 141
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=92.62 E-value=0.17 Score=49.53 Aligned_cols=96 Identities=11% Similarity=-0.006 Sum_probs=64.1
Q ss_pred CCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeec
Q psy6866 662 DPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFART 741 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~ 741 (961)
-++||++.+.++.|+ .++++.++|.-....+..+-+.+++.... ...++.+.+.. +.
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~--f~~i~~~~d~~--------------------~~ 100 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF--GYRRLFRDECV--------------------FV 100 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE--eeeEEECcccc--------------------cc
Confidence 367999999999999 57999999999999999999988874311 01222222211 11
Q ss_pred CHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEe
Q psy6866 742 SPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIA 781 (961)
Q Consensus 742 ~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIa 781 (961)
.|. =...++.+....+.+.++||..+|..+-+.|+|-|.
T Consensus 101 KP~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 101 KGK-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred CCe-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 221 011123333345678899999999998877866653
No 142
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=92.41 E-value=0.63 Score=48.86 Aligned_cols=98 Identities=18% Similarity=0.190 Sum_probs=65.5
Q ss_pred CCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcC---CCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEE
Q psy6866 662 DPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCH---ILSETSSDDNVFTGTDLRKITDEELKDILETNKELVF 738 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~g---i~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ 738 (961)
-++.+++.++++.|+++|+++.++|..+......+-+..+ +...- ...++ ..+.
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f---~~~fd--------------------~~~g 150 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYF---SGYFD--------------------TTVG 150 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhc---ceEEE--------------------eCcc
Confidence 3789999999999999999999999988877666655542 21100 00000 0122
Q ss_pred eecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEee
Q psy6866 739 ARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAM 782 (961)
Q Consensus 739 ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIam 782 (961)
..-.|+-=..+++.+.-..+.++|+||...|+.|-++|++-...
T Consensus 151 ~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 151 LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 23344444455555544446788999999999999999986543
No 143
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=92.32 E-value=0.21 Score=53.50 Aligned_cols=69 Identities=19% Similarity=0.159 Sum_probs=49.4
Q ss_pred EEeecCHHHHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhC--------CeeEeecCCccHhhhhccceEeecCCch
Q psy6866 737 VFARTSPLQKLRIVELYQSL----DEIVAVTGDGVNDAPALKKA--------DIGIAMGITGSEVSKQTADMILMDDNFA 804 (961)
Q Consensus 737 v~ar~~p~~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~A--------dvGIamg~~g~~~a~~aad~vl~~~~~~ 804 (961)
+-.+..+.+|...++.+.+. ...++|+||+.||.+|++.+ ..||+|+ .+ ..+..|++++. +..
T Consensus 159 ~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~--~~~ 233 (244)
T TIGR00685 159 VELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLT--GPQ 233 (244)
T ss_pred EEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCC--CHH
Confidence 44455667899888887653 34688999999999999999 5888885 33 23567888886 445
Q ss_pred HHHHHH
Q psy6866 805 SIVLGI 810 (961)
Q Consensus 805 ~i~~~i 810 (961)
.+...+
T Consensus 234 ~v~~~L 239 (244)
T TIGR00685 234 QVLEFL 239 (244)
T ss_pred HHHHHH
Confidence 555444
No 144
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=92.27 E-value=0.5 Score=49.54 Aligned_cols=86 Identities=14% Similarity=0.122 Sum_probs=55.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEe
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCT---AKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFA 739 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~t---a~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~a 739 (961)
|.-|++.++++.+++.|++|+++||+.... +..--++.|+..- +.+++.+.+- .
T Consensus 120 paip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~---~~LiLR~~~d--------------------~ 176 (229)
T TIGR01675 120 PALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW---KHLILRGLED--------------------S 176 (229)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc---CeeeecCCCC--------------------C
Confidence 788999999999999999999999998755 2222345666431 1222222100 0
Q ss_pred ecCH-HHHHHHHHHHhhcCC-EEEEEcCCCCCHh
Q psy6866 740 RTSP-LQKLRIVELYQSLDE-IVAVTGDGVNDAP 771 (961)
Q Consensus 740 r~~p-~~K~~iv~~l~~~g~-~V~~vGDG~ND~~ 771 (961)
+.+- .-|...-+.+.+.|+ +++.+||-.+|..
T Consensus 177 ~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 177 NKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred CchHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 1111 116666666666665 7888999998873
No 145
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=92.25 E-value=0.62 Score=58.66 Aligned_cols=37 Identities=14% Similarity=0.101 Sum_probs=31.4
Q ss_pred CCCCChHHHHHHH-HHcCCEEEEEcCCCHHHHHHHHHH
Q psy6866 663 PPRPAVPDAIDAC-HKAGIRVIMVTGDHPCTAKAIAIK 699 (961)
Q Consensus 663 ~lr~~~~~~I~~l-~~agi~v~m~TGD~~~ta~~ia~~ 699 (961)
.+-+++.+++++| ++.|+.|+++||+...+....-..
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 4567889999997 788999999999999998887644
No 146
>PLN02811 hydrolase
Probab=92.21 E-value=0.39 Score=50.43 Aligned_cols=98 Identities=19% Similarity=0.231 Sum_probs=59.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHH-HHHHcCCCCCCCCCceeEech--hhccCCHHHHHHHHHhcCceEEe
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKA-IAIKCHILSETSSDDNVFTGT--DLRKITDEELKDILETNKELVFA 739 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~-ia~~~gi~~~~~~~~~v~~g~--~~~~~~~~~~~~~~~~~~~~v~a 739 (961)
++.|++.++|+.|++.|+++.++||-....... ..+..++.... ..++.+. +. -..
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f---~~i~~~~~~~~------------------~~~ 136 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLM---HHVVTGDDPEV------------------KQG 136 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhC---CEEEECChhhc------------------cCC
Confidence 578999999999999999999999977653332 22222332100 1122221 10 011
Q ss_pred ecCHHHHHHHHHHHh---hcCCEEEEEcCCCCCHhhhhhCCeeEe
Q psy6866 740 RTSPLQKLRIVELYQ---SLDEIVAVTGDGVNDAPALKKADIGIA 781 (961)
Q Consensus 740 r~~p~~K~~iv~~l~---~~g~~V~~vGDG~ND~~al~~AdvGIa 781 (961)
+-.|+-=...++.+. -..+.+.||||+..|+.|-+.|++-..
T Consensus 137 KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 137 KPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred CCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEE
Confidence 223333334444443 223568899999999999999998653
No 147
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=91.61 E-value=0.56 Score=52.73 Aligned_cols=100 Identities=17% Similarity=0.039 Sum_probs=58.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCC---------------CHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHH
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGD---------------HPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELK 727 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD---------------~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~ 727 (961)
++.|++.++++.|+++|+++.++|+- ....+..+.+..|+... ..++... .. .
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd----~i~i~~~-~~--s----- 97 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD----EVLICPH-FP--E----- 97 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee----eEEEeCC-cC--c-----
Confidence 68999999999999999999999982 13345556666776310 1111100 00 0
Q ss_pred HHHHhcCceEEee-cCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEe
Q psy6866 728 DILETNKELVFAR-TSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIA 781 (961)
Q Consensus 728 ~~~~~~~~~v~ar-~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIa 781 (961)
+...+| ..|.-=..+.+.+.-..+.+.||||+.+|..+-+.|++-..
T Consensus 98 -------d~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 98 -------DNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred -------ccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 000111 12211112222222223678899999999999999988754
No 148
>KOG3120|consensus
Probab=91.02 E-value=1.4 Score=44.98 Aligned_cols=119 Identities=19% Similarity=0.220 Sum_probs=68.4
Q ss_pred CCCCChHHHHHHHHHcCC-EEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeec
Q psy6866 663 PPRPAVPDAIDACHKAGI-RVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFART 741 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi-~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~ 741 (961)
|+-|+..++|+.+++.|- .++++|--|..-...+-+..|+..-- ..+++.....+.+. ...+..+....-+.+|
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F---~~IfTNPa~~da~G--~L~v~pyH~~hsC~~C 158 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLF---SEIFTNPACVDASG--RLLVRPYHTQHSCNLC 158 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHH---HHHhcCCcccCCCC--cEEeecCCCCCccCcC
Confidence 778999999999999997 89999999988888887777763100 00000000000000 0000000000123333
Q ss_pred CH-HHHHHHHHHHhhc-------CCEEEEEcCCCCC-HhhhhhCCeeEeecCCc
Q psy6866 742 SP-LQKLRIVELYQSL-------DEIVAVTGDGVND-APALKKADIGIAMGITG 786 (961)
Q Consensus 742 ~p-~~K~~iv~~l~~~-------g~~V~~vGDG~ND-~~al~~AdvGIamg~~g 786 (961)
.+ .=|..++..++.. -+.+..+|||.|| ||+++...--+||--.|
T Consensus 159 PsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkg 212 (256)
T KOG3120|consen 159 PSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKG 212 (256)
T ss_pred chhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCC
Confidence 33 2477777666532 2378889999999 67776666666665334
No 149
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=90.26 E-value=0.97 Score=45.22 Aligned_cols=94 Identities=12% Similarity=0.127 Sum_probs=56.7
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCCHH------------HHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHH
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDHPC------------TAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILE 731 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~~~------------ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~ 731 (961)
+-|++.++++.|+++|+++.++|.-... .+..+.+.+|+.. ..++.+.+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~-----~~ii~~~~~------------- 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI-----QVLAATHAG------------- 104 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE-----EEEEecCCC-------------
Confidence 3489999999999999999999975432 3456677888732 112211110
Q ss_pred hcCceEEeecCHHHHHHHHHHHh--hcCCEEEEEcCCC--------CCHhhhhhCCeeE
Q psy6866 732 TNKELVFARTSPLQKLRIVELYQ--SLDEIVAVTGDGV--------NDAPALKKADIGI 780 (961)
Q Consensus 732 ~~~~~v~ar~~p~~K~~iv~~l~--~~g~~V~~vGDG~--------ND~~al~~AdvGI 780 (961)
....-.|+-=..+.+.+. -..+.+.||||.. +|..+-++|++-.
T Consensus 105 -----~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 -----LYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred -----CCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 001112222223333332 1235688999986 6999888887654
No 150
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=90.22 E-value=0.68 Score=60.06 Aligned_cols=132 Identities=14% Similarity=0.153 Sum_probs=82.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
.+-|++.+.++.|+++|+++.++|+-....+..+-++.|+..... ..++.+.+.. ..+-.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~F--d~iv~~~~~~------------------~~KP~ 220 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMF--DAIVSADAFE------------------NLKPA 220 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHC--CEEEECcccc------------------cCCCC
Confidence 357899999999999999999999999998888888888842110 1222222111 11223
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE-eec--CCccHhhhhccceEeecCCchHHHHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI-AMG--ITGSEVSKQTADMILMDDNFASIVLGIEEGR 814 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI-amg--~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR 814 (961)
|+-=...++.+.-..+.+.++||..+|+.+-+.|++-. .+. ....+.....+|+++.+-.--++...+..|-
T Consensus 221 Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~~ 295 (1057)
T PLN02919 221 PDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILTGGS 295 (1057)
T ss_pred HHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHhcCC
Confidence 33333444444444566888999999999999998732 222 1112233456788876543333555554443
No 151
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=90.11 E-value=0.6 Score=48.58 Aligned_cols=97 Identities=16% Similarity=0.151 Sum_probs=56.4
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHH--HHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEee
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCT--AKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFAR 740 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~t--a~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar 740 (961)
++.|++.++++.|++.|+++.++|...... ........++...- ..++...+ .-..+
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f---d~v~~s~~------------------~~~~K 152 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF---DAVVESCL------------------EGLRK 152 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC---CEEEEeee------------------cCCCC
Confidence 678999999999999999999999865432 22222223332110 01111100 00112
Q ss_pred cCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 741 TSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 741 ~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
-.|+-=..+.+.+.-..+.++|+||...|+.+=++|++-.
T Consensus 153 P~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 153 PDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred CCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 2333323333444333456788899999999999998754
No 152
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=89.99 E-value=0.62 Score=44.41 Aligned_cols=39 Identities=13% Similarity=0.182 Sum_probs=34.0
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCC-CHHHHHHHHHHcC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGD-HPCTAKAIAIKCH 701 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD-~~~ta~~ia~~~g 701 (961)
++.+++.+.++.|+++|+++.++|+- ....+..+-+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 7777767666665
No 153
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=89.66 E-value=0.99 Score=44.96 Aligned_cols=86 Identities=20% Similarity=0.184 Sum_probs=64.3
Q ss_pred cCCCCCChHHHHHHHHHcCC--EEEEEcCC-------CHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHH
Q psy6866 661 YDPPRPAVPDAIDACHKAGI--RVIMVTGD-------HPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILE 731 (961)
Q Consensus 661 ~D~lr~~~~~~I~~l~~agi--~v~m~TGD-------~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~ 731 (961)
++.+-++..+.+++|++.+. +|+++|-- +...|..+++.+|+.-
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpv--------------------------- 109 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPV--------------------------- 109 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcE---------------------------
Confidence 35788899999999999987 49999986 4889999999999831
Q ss_pred hcCceEEeecCHHHHHHHHHHHhhc-----CCEEEEEcCCC-CCHhhhhhCC
Q psy6866 732 TNKELVFARTSPLQKLRIVELYQSL-----DEIVAVTGDGV-NDAPALKKAD 777 (961)
Q Consensus 732 ~~~~~v~ar~~p~~K~~iv~~l~~~-----g~~V~~vGDG~-ND~~al~~Ad 777 (961)
..+....|.-..++.+.++.+ -+.++||||-. .|+-|=...+
T Consensus 110 ----l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G 157 (168)
T PF09419_consen 110 ----LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMG 157 (168)
T ss_pred ----EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccC
Confidence 124445786667788888654 56799999975 5666544433
No 154
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=89.40 E-value=4.9 Score=43.30 Aligned_cols=48 Identities=17% Similarity=0.207 Sum_probs=36.9
Q ss_pred eeeeecCC----CCCChHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHcCCC
Q psy6866 656 GLISLYDP----PRPAVPDAIDACHKAGIRVIMVTGDHPCT---AKAIAIKCHIL 703 (961)
Q Consensus 656 G~i~~~D~----lr~~~~~~I~~l~~agi~v~m~TGD~~~t---a~~ia~~~gi~ 703 (961)
|.+.-.+. +=|++.++|++|+++|++++++||.+..+ .....+++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 55555555 78899999999999999999999977664 44445566764
No 155
>PLN03017 trehalose-phosphatase
Probab=89.16 E-value=2.7 Score=47.25 Aligned_cols=45 Identities=11% Similarity=-0.012 Sum_probs=34.3
Q ss_pred ceEEeeeeecC--CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHH
Q psy6866 652 FRLIGLISLYD--PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIA 697 (961)
Q Consensus 652 l~~lG~i~~~D--~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia 697 (961)
.||+-++.-.| .+-+++.++|++|. .|+.++++||+.......+.
T Consensus 120 GTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 120 GTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred CcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 34444443222 36788999999999 78999999999999988874
No 156
>PLN02580 trehalose-phosphatase
Probab=88.75 E-value=0.66 Score=52.53 Aligned_cols=62 Identities=21% Similarity=0.195 Sum_probs=43.7
Q ss_pred HHHHHHHHHHhhc-C-----C-EEEEEcCCCCCHhhhhh-----CCeeEeecCCccHhhhhccceEeecCCchHHHHHH
Q psy6866 744 LQKLRIVELYQSL-D-----E-IVAVTGDGVNDAPALKK-----ADIGIAMGITGSEVSKQTADMILMDDNFASIVLGI 810 (961)
Q Consensus 744 ~~K~~iv~~l~~~-g-----~-~V~~vGDG~ND~~al~~-----AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i 810 (961)
.+|...|+.+.+. | . .++++||+.||..||+. +++||+|| ++... -.|++.|.+ -..+...+
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~~--t~A~y~L~d--p~eV~~~L 373 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPKE--SNAFYSLRD--PSEVMEFL 373 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCCC--ccceEEcCC--HHHHHHHH
Confidence 4899999888653 2 2 24788999999999996 69999999 55433 256777764 34444333
No 157
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=88.61 E-value=5.8 Score=46.88 Aligned_cols=96 Identities=13% Similarity=-0.030 Sum_probs=61.4
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-cCCCCCCCCC-----ceeEechhhccCCHHHHHHHHHhcCceE
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIK-CHILSETSSD-----DNVFTGTDLRKITDEELKDILETNKELV 737 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~-~gi~~~~~~~-----~~v~~g~~~~~~~~~~~~~~~~~~~~~v 737 (961)
+++++. +.+++.|.+ +++|+-...-++.+|++ +|+..--... .-.++|. +
T Consensus 111 l~~~a~---~~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~--------------------i 166 (497)
T PLN02177 111 VHPETW---RVFNSFGKR-YIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGF--------------------M 166 (497)
T ss_pred cCHHHH---HHHHhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeee--------------------e
Confidence 455544 455667754 99999999999999987 7985210000 1111221 1
Q ss_pred Ee--ecCHHHHHHHHHHHhhc-CCEEEEEcCCCCCHhhhhhCCeeEeecC
Q psy6866 738 FA--RTSPLQKLRIVELYQSL-DEIVAVTGDGVNDAPALKKADIGIAMGI 784 (961)
Q Consensus 738 ~a--r~~p~~K~~iv~~l~~~-g~~V~~vGDG~ND~~al~~AdvGIamg~ 784 (961)
-. .+.-++|..-++..... -..+ +-||+.||.|||+.|+-+.+++.
T Consensus 167 ~g~~~c~Ge~Kv~rl~~~~g~~~~~~-aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 167 KKPGVLVGDHKRDAVLKEFGDALPDL-GLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred cCCCCCccHHHHHHHHHHhCCCCceE-EEECCccHHHHHHhCCccEEeCC
Confidence 11 13557788877643321 1234 55999999999999999999983
No 158
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=88.44 E-value=0.96 Score=50.53 Aligned_cols=92 Identities=11% Similarity=0.062 Sum_probs=65.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH----cCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEE
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIK----CHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVF 738 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~----~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ 738 (961)
++.+++.++++.|++.|+.+.++|.-+...+..+-++ +|+... +. .+.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~---------------------------f~-~~~ 82 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAED---------------------------FD-ARS 82 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHH---------------------------ee-EEE
Confidence 4578999999999999999999999999999998887 666321 00 122
Q ss_pred eecCH--HHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEee
Q psy6866 739 ARTSP--LQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAM 782 (961)
Q Consensus 739 ar~~p--~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIam 782 (961)
+...| +.=..+.+.+.-.-+.++|+||...|+.+.+.+...+.+
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 22233 222333333332346788999999999999998887654
No 159
>PLN02645 phosphoglycolate phosphatase
Probab=88.08 E-value=0.85 Score=50.75 Aligned_cols=48 Identities=19% Similarity=0.250 Sum_probs=39.0
Q ss_pred eeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHH---HHcCCC
Q psy6866 656 GLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIA---IKCHIL 703 (961)
Q Consensus 656 G~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia---~~~gi~ 703 (961)
|.+.-.+.+=+++.++|+.|++.|++++++|+....+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 555555677799999999999999999999999977766666 567764
No 160
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=86.62 E-value=4.6 Score=43.33 Aligned_cols=49 Identities=16% Similarity=0.194 Sum_probs=39.3
Q ss_pred eeeeecCCCCCChHHHHHHHHHcCCEEEEEcC---CCHHHHHHHHHHcCCCC
Q psy6866 656 GLISLYDPPRPAVPDAIDACHKAGIRVIMVTG---DHPCTAKAIAIKCHILS 704 (961)
Q Consensus 656 G~i~~~D~lr~~~~~~I~~l~~agi~v~m~TG---D~~~ta~~ia~~~gi~~ 704 (961)
|.+.-.+.+-+++.++|++|++.|++++++|| ..........+++|+..
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 44445566677999999999999999999996 66777777778888753
No 161
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=85.15 E-value=1.1 Score=43.95 Aligned_cols=86 Identities=27% Similarity=0.383 Sum_probs=61.3
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCCHH----HHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEe
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDHPC----TAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFA 739 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~~~----ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~a 739 (961)
+++-+++.|..-++.|=.++.+||+.+. ++..+|+...|...+ .++|+
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~----------------------------pv~f~ 166 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMN----------------------------PVIFA 166 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCc----------------------------ceeec
Confidence 5666789999999999999999999754 556677777774321 13555
Q ss_pred ecCH-HHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCe
Q psy6866 740 RTSP-LQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADI 778 (961)
Q Consensus 740 r~~p-~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~Adv 778 (961)
--.| -.+..-..++|+.+-.+-. ||+.||+.|-|.|++
T Consensus 167 Gdk~k~~qy~Kt~~i~~~~~~IhY-GDSD~Di~AAkeaG~ 205 (237)
T COG3700 167 GDKPKPGQYTKTQWIQDKNIRIHY-GDSDNDITAAKEAGA 205 (237)
T ss_pred cCCCCcccccccHHHHhcCceEEe-cCCchhhhHHHhcCc
Confidence 4444 1223335567777777666 999999999998865
No 162
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=84.91 E-value=1.9 Score=44.33 Aligned_cols=97 Identities=12% Similarity=0.153 Sum_probs=57.6
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-cCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeec
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIK-CHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFART 741 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~-~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~ 741 (961)
++.|++.++++.|++.|+++.++|.-+.......-.. .++...- ..++...+. -..+-
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~f---d~v~~s~~~------------------~~~KP 142 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAA---DHIYLSQDL------------------GMRKP 142 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhc---CEEEEeccc------------------CCCCC
Confidence 4689999999999999999999999776554332221 2221100 011111110 01122
Q ss_pred CHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 742 SPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 742 ~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
.|+-=..+++.+.-..+.+.++||...|+.+-++|++-.
T Consensus 143 ~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 143 EARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred CHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 233223334444434456789999999999988888854
No 163
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=84.32 E-value=3.3 Score=43.29 Aligned_cols=97 Identities=14% Similarity=0.155 Sum_probs=62.6
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.| ++++.++|+.....+...-+..|+...-. ..++.+.+.. ..+-.
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~--~~v~~~~~~~------------------~~KP~ 144 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFP--DKLFSGYDIQ------------------RWKPD 144 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCc--ceEeeHHhcC------------------CCCCC
Confidence 4568999999988 48999999998888887777788743210 1222322111 01223
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEee
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAM 782 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIam 782 (961)
|+-=....+.+.-..+.++|+||..+|..+=++|++....
T Consensus 145 p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 145 PALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 3333333334433345688999999999999999987653
No 164
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=83.03 E-value=31 Score=44.65 Aligned_cols=85 Identities=13% Similarity=0.117 Sum_probs=54.4
Q ss_pred CCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccC-----CCe-eEE----EECCeEEEEECCCcccceEEEecC
Q psy6866 198 PQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMI-----PTR-ATV----IRNGSVKEIDSAGLVRGDIVLLKI 267 (961)
Q Consensus 198 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-----~~~-~~V----~R~G~~~~I~~~eLv~GDIV~l~~ 267 (961)
|.+.+.+.++++++++++.+.++.+++..++..+...+.. ..+ ..+ +.-|....+...|.+|.|.+.++.
T Consensus 128 ~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g 207 (941)
T TIGR01517 128 WIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISG 207 (941)
T ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEc
Confidence 3345556666667778888888888876666554343221 122 222 245889999999999999999864
Q ss_pred CCeeeccEEEEeeCCc
Q psy6866 268 GDKVPADIRLIEIQDL 283 (961)
Q Consensus 268 Gd~IPaD~ill~g~~l 283 (961)
...=+|=-.|.|++.
T Consensus 208 -~~l~VdES~LTGES~ 222 (941)
T TIGR01517 208 -LSLEIDESSITGESD 222 (941)
T ss_pred -CcEEEEecccCCCCC
Confidence 344455555555553
No 165
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=82.40 E-value=5 Score=40.62 Aligned_cols=98 Identities=15% Similarity=0.110 Sum_probs=61.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.+++.+++++|+ .++.++|.-+...+....+..|+...- ..++.+.+...- ...++-.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f---d~i~~~~~~~~~--------------~~~~KP~ 143 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF---DGIFCFDTANPD--------------YLLPKPS 143 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh---CeEEEeecccCc--------------cCCCCCC
Confidence 46788999999997 478999999988899999999984321 112221110000 0001223
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
|+-=..+++.+....+.++|+||...|+.+=+.|++-.
T Consensus 144 p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 144 PQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 33334444555444566889999999999888887654
No 166
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=82.39 E-value=3.3 Score=41.80 Aligned_cols=100 Identities=22% Similarity=0.299 Sum_probs=60.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHH---hcCceEEe
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILE---TNKELVFA 739 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~---~~~~~v~a 739 (961)
.+.+++.+++..|+++|++++|+|- +.||... -+++.++..++..-...+.. ....+.+|
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTN-----------QsGi~rg------yf~~~~f~~~~~~m~~~l~~~gv~id~i~~C 93 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTN-----------QSGIGRG------YFTEADFDKLHNKMLKILASQGVKIDGILYC 93 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEEC-----------CCCcccc------CccHHHHHHHHHHHHHHHHHcCCccceEEEC
Confidence 3578999999999999999999994 3344321 12223333322211111111 12334666
Q ss_pred ecCHHH--------HHHHHHHHhhcC---CEEEEEcCCCCCHhhhhhCCee
Q psy6866 740 RTSPLQ--------KLRIVELYQSLD---EIVAVTGDGVNDAPALKKADIG 779 (961)
Q Consensus 740 r~~p~~--------K~~iv~~l~~~g---~~V~~vGDG~ND~~al~~AdvG 779 (961)
.-.|++ ..-+.+.+++.+ ....+|||...|..+-..|+++
T Consensus 94 ph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 94 PHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 666653 334445555544 5778999999999988877776
No 167
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=82.31 E-value=3.9 Score=41.43 Aligned_cols=91 Identities=19% Similarity=0.179 Sum_probs=60.1
Q ss_pred hHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHH
Q psy6866 668 VPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKL 747 (961)
Q Consensus 668 ~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~ 747 (961)
..++++.|++. +++.++|+.....+...-+..|+...- ..++.+.+. -..+-.|+-=.
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f---d~i~~~~~~------------------~~~KP~p~~~~ 149 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF---DAVVAADDV------------------QHHKPAPDTFL 149 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc---eEEEehhhc------------------cCCCCChHHHH
Confidence 46889999875 899999999999999999999985321 122222211 11223333334
Q ss_pred HHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 748 RIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 748 ~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
...+.+.-....+.++||..+|+.+=+.|++-.
T Consensus 150 ~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 150 RCAQLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred HHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 444444433345778899999999999998754
No 168
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=81.77 E-value=39 Score=44.37 Aligned_cols=39 Identities=18% Similarity=0.245 Sum_probs=28.2
Q ss_pred ECCeEEEEE--CCCcccceEEEecCCCeeeccEEEEeeCCcee
Q psy6866 245 RNGSVKEID--SAGLVRGDIVLLKIGDKVPADIRLIEIQDLKA 285 (961)
Q Consensus 245 R~G~~~~I~--~~eLv~GDIV~l~~Gd~IPaD~ill~g~~l~v 285 (961)
.-|....+. ..+.+|.|.+.++ |+ +=+|=-.|.|++.-+
T Consensus 248 vpGDiv~l~~~~g~~iPaD~~ll~-g~-~~VdES~LTGES~Pv 288 (1054)
T TIGR01657 248 VPGDIVSIPRPEEKTMPCDSVLLS-GS-CIVNESMLTGESVPV 288 (1054)
T ss_pred CCCCEEEEecCCCCEecceEEEEe-Cc-EEEecccccCCccce
Confidence 348888998 8999999999996 43 446655666665433
No 169
>PHA02597 30.2 hypothetical protein; Provisional
Probab=81.73 E-value=3.4 Score=42.33 Aligned_cols=92 Identities=11% Similarity=0.091 Sum_probs=53.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCC-CCceeEechhhccCCHHHHHHHHHhcCceEEeec
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETS-SDDNVFTGTDLRKITDEELKDILETNKELVFART 741 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~-~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~ 741 (961)
++.|++.++++.|++.+ +.+++|.-+.......-+.+++..-.. .-..+ +.++.
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i------------------------~~~~~ 128 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEV------------------------LMCGH 128 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEE------------------------EEecc
Confidence 47899999999999875 566667654444444445566532100 00011 12222
Q ss_pred CHHHHHHHHH-HHhhcC-CEEEEEcCCCCCHhhhhhC--CeeE
Q psy6866 742 SPLQKLRIVE-LYQSLD-EIVAVTGDGVNDAPALKKA--DIGI 780 (961)
Q Consensus 742 ~p~~K~~iv~-~l~~~g-~~V~~vGDG~ND~~al~~A--dvGI 780 (961)
... |.+++. .+++.| +.++|+||..+|+.+-++| ++-.
T Consensus 129 ~~~-kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 129 DES-KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred Ccc-cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 111 223333 222233 4577999999999999999 8854
No 170
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=81.15 E-value=1.3 Score=40.34 Aligned_cols=49 Identities=24% Similarity=0.339 Sum_probs=36.6
Q ss_pred eeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHH---HHcCCCC
Q psy6866 656 GLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIA---IKCHILS 704 (961)
Q Consensus 656 G~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia---~~~gi~~ 704 (961)
|++...+.+=|++.++|+.|+++|++++++|.....+...++ +++|+..
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 566677888999999999999999999999988755544444 5677743
No 171
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=81.13 E-value=14 Score=40.24 Aligned_cols=49 Identities=18% Similarity=0.276 Sum_probs=36.0
Q ss_pred eeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHH---HHHHcCCCC
Q psy6866 656 GLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKA---IAIKCHILS 704 (961)
Q Consensus 656 G~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~---ia~~~gi~~ 704 (961)
|.+.-.+.+=+++.++|++|++.|++++++|+....+... --+++|+..
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~ 62 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG 62 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 4444466777889999999999999999999976443333 335577743
No 172
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=80.00 E-value=7.3 Score=38.34 Aligned_cols=103 Identities=16% Similarity=0.177 Sum_probs=66.4
Q ss_pred CCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHH---HHc-----CCCCCCCCCceeEechhhccCCHHHHHHHHHhc
Q psy6866 662 DPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIA---IKC-----HILSETSSDDNVFTGTDLRKITDEELKDILETN 733 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia---~~~-----gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~ 733 (961)
|..++++.+..+.++++|++++.+|++..-.+...- .+. ++... .+.++...+. ..+
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~G----pv~~sP~~l~--------~al--- 90 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDG----PVLLSPDSLF--------SAL--- 90 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCC----CEEECCcchh--------hhh---
Confidence 689999999999999999999999999866554432 111 22110 1111111100 000
Q ss_pred CceEEeecCHHHHHHHHHHHhhc-----CCEEEEEcCCCCCHhhhhhCCee
Q psy6866 734 KELVFARTSPLQKLRIVELYQSL-----DEIVAVTGDGVNDAPALKKADIG 779 (961)
Q Consensus 734 ~~~v~ar~~p~~K~~iv~~l~~~-----g~~V~~vGDG~ND~~al~~AdvG 779 (961)
...+..+-.-+.|...++.++.. ...++.-|...+|+.+.++++|-
T Consensus 91 ~rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 91 HREVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred hccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 01144555557898888888764 45677778888999998877654
No 173
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=74.44 E-value=13 Score=40.09 Aligned_cols=88 Identities=17% Similarity=0.161 Sum_probs=52.3
Q ss_pred CCCCCChHHHHHHHHHcCCEEEEEcCCCHH----HHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceE
Q psy6866 662 DPPRPAVPDAIDACHKAGIRVIMVTGDHPC----TAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELV 737 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~v~m~TGD~~~----ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v 737 (961)
.|.=|++.+..+.+++.|++|+++||+... |..++ ++.|+... +.+++.+..-.
T Consensus 144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~---~~LiLR~~~D~------------------ 201 (275)
T TIGR01680 144 APALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTW---EKLILKDPQDN------------------ 201 (275)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCc---ceeeecCCCCC------------------
Confidence 467789999999999999999999999854 33333 33566431 11222211000
Q ss_pred EeecCHHHHHHHHHHHhhcCC-EEEEEcCCCCCHh
Q psy6866 738 FARTSPLQKLRIVELYQSLDE-IVAVTGDGVNDAP 771 (961)
Q Consensus 738 ~ar~~p~~K~~iv~~l~~~g~-~V~~vGDG~ND~~ 771 (961)
-.....+-|...-+.+.+.|+ +++.+||-.+|..
T Consensus 202 ~~~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl~ 236 (275)
T TIGR01680 202 SAENAVEYKTAARAKLIQEGYNIVGIIGDQWNDLK 236 (275)
T ss_pred ccchhHHHHHHHHHHHHHcCceEEEEECCCHHhcc
Confidence 000011234444444455554 7888999999873
No 174
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=73.32 E-value=6.5 Score=41.61 Aligned_cols=130 Identities=13% Similarity=0.202 Sum_probs=66.0
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEech-hhccCCHHHHHHHHHhcCceEEeec
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGT-DLRKITDEELKDILETNKELVFART 741 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~-~~~~~~~~~~~~~~~~~~~~v~ar~ 741 (961)
.+|+++.+.++.|++.+|.+.++|+-=-.....+-++-|...++. .+++.- .+++ + ..+.+=.
T Consensus 90 ~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv---~VvSN~M~Fd~---~----------g~l~gF~ 153 (246)
T PF05822_consen 90 MLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNV---KVVSNFMDFDE---D----------GVLVGFK 153 (246)
T ss_dssp -B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTE---EEEEE-EEE-T---T----------SBEEEE-
T ss_pred hhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCe---EEEeeeEEECC---c----------ceEeecC
Confidence 689999999999999999999999877777777767767765542 222110 0000 0 0000000
Q ss_pred ----CHHHHHH-------HHHHHhhcCCEEEEEcCCCCCHhhhhhC---CeeEeec-CC-ccH----hhhhccceEeecC
Q psy6866 742 ----SPLQKLR-------IVELYQSLDEIVAVTGDGVNDAPALKKA---DIGIAMG-IT-GSE----VSKQTADMILMDD 801 (961)
Q Consensus 742 ----~p~~K~~-------iv~~l~~~g~~V~~vGDG~ND~~al~~A---dvGIamg-~~-g~~----~a~~aad~vl~~~ 801 (961)
.+-.|-. .-+.++.+. .|...||..-|+.|-.-. +.-+..| .+ ..| .-+++=|+|+.+|
T Consensus 154 ~~lIH~~NKn~~~l~~~~~~~~~~~R~-NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D 232 (246)
T PF05822_consen 154 GPLIHTFNKNESALEDSPYFKQLKKRT-NVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDD 232 (246)
T ss_dssp SS---TT-HHHHHHTTHHHHHCTTT---EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET-
T ss_pred CCceEEeeCCcccccCchHHHHhccCC-cEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECC
Confidence 0111211 112333333 455569999999997655 3333333 11 222 2356789999988
Q ss_pred CchHHHHH
Q psy6866 802 NFASIVLG 809 (961)
Q Consensus 802 ~~~~i~~~ 809 (961)
.=-.++.+
T Consensus 233 ~tm~v~~~ 240 (246)
T PF05822_consen 233 QTMDVPNA 240 (246)
T ss_dssp -B-HHHHH
T ss_pred CCchHHHH
Confidence 64445443
No 175
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=72.62 E-value=5.2 Score=42.32 Aligned_cols=89 Identities=16% Similarity=0.198 Sum_probs=54.4
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHH---HHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEe
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPC---TAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFA 739 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~---ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~a 739 (961)
+.=|++.+.++.+++.|++|+++||++.. .+..--++.|+... +.+++.+..-.. .
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~---~~l~lr~~~~~~------------------~ 173 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW---DHLILRPDKDPS------------------K 173 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB---SCGEEEEESSTS------------------S
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc---chhccccccccc------------------c
Confidence 55578999999999999999999998644 22223355565321 112222211000 0
Q ss_pred ecCHHHHHHHHHHHhhcC-CEEEEEcCCCCCHhh
Q psy6866 740 RTSPLQKLRIVELYQSLD-EIVAVTGDGVNDAPA 772 (961)
Q Consensus 740 r~~p~~K~~iv~~l~~~g-~~V~~vGDG~ND~~a 772 (961)
.....-|...-+.+++.| ++++.+||-.+|..-
T Consensus 174 ~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 174 KSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ------SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred ccccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 001223777777787775 588899999999875
No 176
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=72.49 E-value=10 Score=39.78 Aligned_cols=98 Identities=19% Similarity=0.225 Sum_probs=73.0
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.+.++.|++.|+.+.+.|+-....+..+.+..|+...- ..++++.+. .-.+-.
T Consensus 86 ~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f---~~~v~~~dv------------------~~~KP~ 144 (221)
T COG0637 86 KPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF---DVIVTADDV------------------ARGKPA 144 (221)
T ss_pred CCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc---chhccHHHH------------------hcCCCC
Confidence 78999999999999999999999999999999999999986532 112222221 222455
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEe
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIA 781 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIa 781 (961)
|+-=..-.+.|.-....+.++.|+.|.+.|-++|+.-+-
T Consensus 145 Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv 183 (221)
T COG0637 145 PDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVV 183 (221)
T ss_pred CHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEE
Confidence 666666666664444556677999999999999987654
No 177
>PLN02423 phosphomannomutase
Probab=71.69 E-value=5.1 Score=42.87 Aligned_cols=39 Identities=21% Similarity=0.269 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhhcCCEEEEEcC----CCCCHhhhhh-CCeeEeec
Q psy6866 744 LQKLRIVELYQSLDEIVAVTGD----GVNDAPALKK-ADIGIAMG 783 (961)
Q Consensus 744 ~~K~~iv~~l~~~g~~V~~vGD----G~ND~~al~~-AdvGIamg 783 (961)
.+|+.-++.|+ ..+.|++.|| |.||.+||+. -=.|+++.
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 58999999999 4455566699 8999999996 77788874
No 178
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=71.36 E-value=18 Score=38.99 Aligned_cols=123 Identities=15% Similarity=0.166 Sum_probs=73.5
Q ss_pred cCCCCCChHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHcCC--CCCCCCCceeEechhhccCCHH-----------HH
Q psy6866 661 YDPPRPAVPDAIDACHKA-GIRVIMVTGDHPCTAKAIAIKCHI--LSETSSDDNVFTGTDLRKITDE-----------EL 726 (961)
Q Consensus 661 ~D~lr~~~~~~I~~l~~a-gi~v~m~TGD~~~ta~~ia~~~gi--~~~~~~~~~v~~g~~~~~~~~~-----------~~ 726 (961)
..++-++..++++.|... ..-++|+||.+.........-.|| ..++.......+|.......++ ++
T Consensus 38 ~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l 117 (266)
T COG1877 38 AAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAIL 117 (266)
T ss_pred ccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHHHH
Confidence 346777888999999876 557999999999988887663333 2221111111122111111000 00
Q ss_pred HHHHH----------------------------------------------hcCceEEeecCHHHHHHHHHHHhhc----
Q psy6866 727 KDILE----------------------------------------------TNKELVFARTSPLQKLRIVELYQSL---- 756 (961)
Q Consensus 727 ~~~~~----------------------------------------------~~~~~v~ar~~p~~K~~iv~~l~~~---- 756 (961)
..... ..+.+|..|.+-..|+..++.+.+.
T Consensus 118 ~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~ 197 (266)
T COG1877 118 EYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELPFD 197 (266)
T ss_pred HHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhcCCCC
Confidence 00000 0123466677767799999976553
Q ss_pred CCEEEEEcCCCCCHhhhhhCC----eeEeec
Q psy6866 757 DEIVAVTGDGVNDAPALKKAD----IGIAMG 783 (961)
Q Consensus 757 g~~V~~vGDG~ND~~al~~Ad----vGIamg 783 (961)
|..+.+.||-..|-.|++..+ .+|-+|
T Consensus 198 ~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~ 228 (266)
T COG1877 198 GRFPIFAGDDLTDEDAFAAVNKLDSITVKVG 228 (266)
T ss_pred CCcceecCCCCccHHHHHhhccCCCceEEec
Confidence 445778899999999999887 455555
No 179
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=71.07 E-value=9.3 Score=36.21 Aligned_cols=32 Identities=16% Similarity=0.212 Sum_probs=28.3
Q ss_pred CCCCCChHHHHHHHHHcCCEEEEEcCCCHHHH
Q psy6866 662 DPPRPAVPDAIDACHKAGIRVIMVTGDHPCTA 693 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta 693 (961)
+++.+++.++++++++.|+.++++||+.....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 56888999999999999999999999987653
No 180
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=70.17 E-value=6.9 Score=42.47 Aligned_cols=41 Identities=15% Similarity=0.141 Sum_probs=38.1
Q ss_pred CC-CChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy6866 664 PR-PAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILS 704 (961)
Q Consensus 664 lr-~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~ 704 (961)
+| |++.+++++|+++|+++.++|+-....+...-+++|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 66 999999999999999999999999999999999999964
No 181
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=69.09 E-value=3.1 Score=41.40 Aligned_cols=43 Identities=16% Similarity=0.125 Sum_probs=38.2
Q ss_pred ecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy6866 660 LYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHIL 703 (961)
Q Consensus 660 ~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~ 703 (961)
+.=..||++.+.++.|.+. +.+++.|......|..+.+.++..
T Consensus 39 ~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~ 81 (162)
T TIGR02251 39 VYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG 81 (162)
T ss_pred EEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC
Confidence 3346899999999999987 999999999999999999988863
No 182
>PRK10444 UMP phosphatase; Provisional
Probab=68.85 E-value=5.3 Score=42.84 Aligned_cols=45 Identities=13% Similarity=0.268 Sum_probs=39.7
Q ss_pred eeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc
Q psy6866 656 GLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKC 700 (961)
Q Consensus 656 G~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~ 700 (961)
|.+.-.+.+-|++.++|+.|++.|++++++|+....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 666667788999999999999999999999999998888877775
No 183
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=65.84 E-value=9.8 Score=41.40 Aligned_cols=41 Identities=15% Similarity=0.149 Sum_probs=36.9
Q ss_pred CC-CChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy6866 664 PR-PAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILS 704 (961)
Q Consensus 664 lr-~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~ 704 (961)
+| |++.+++++|+++|+++.++|+.....+..+.+..|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 46 889999999999999999999888888899999999953
No 184
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=64.41 E-value=19 Score=38.20 Aligned_cols=92 Identities=12% Similarity=0.042 Sum_probs=54.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++-|++.++++.|++. +++.++|.-+... +..|+...- ..++...+ +.+..
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~~-----~~~gl~~~f---d~i~~~~~--------------------~~~~K 163 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQP-----ELFGLGDYF---EFVLRAGP--------------------HGRSK 163 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCchH-----HHCCcHHhh---ceeEeccc--------------------CCcCC
Confidence 4668999999999875 8888898865441 455653210 01111111 11122
Q ss_pred H--HHHHHHHHHHhhcCCEEEEEcCC-CCCHhhhhhCCeeEeec
Q psy6866 743 P--LQKLRIVELYQSLDEIVAVTGDG-VNDAPALKKADIGIAMG 783 (961)
Q Consensus 743 p--~~K~~iv~~l~~~g~~V~~vGDG-~ND~~al~~AdvGIamg 783 (961)
| +-=...++.+.-..+.++||||. ..|+.+=++|++-....
T Consensus 164 P~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v 207 (238)
T PRK10748 164 PFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWI 207 (238)
T ss_pred CcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEE
Confidence 3 22222333333334568899999 59999989998766543
No 185
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=64.20 E-value=2.2e+02 Score=37.21 Aligned_cols=208 Identities=9% Similarity=0.025 Sum_probs=99.4
Q ss_pred hhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccC-----CCe-eEE----EECCeEEEEECCCcccceEEEecCCCee
Q psy6866 202 LWLGIILALTCIVTGMFSFYQERKSSHITESFAKMI-----PTR-ATV----IRNGSVKEIDSAGLVRGDIVLLKIGDKV 271 (961)
Q Consensus 202 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-----~~~-~~V----~R~G~~~~I~~~eLv~GDIV~l~~Gd~I 271 (961)
..+.+++++..+++.+ ..++.++..+.+.++.... ..+ ..+ +.-|....+...|.+|.|.+.++... +
T Consensus 108 ~~i~~vv~i~~~i~~~-qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~-l 185 (997)
T TIGR01106 108 VVLSAVVIITGCFSYY-QEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG-C 185 (997)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC-c
Confidence 3444445445555544 4455555555555553221 112 222 34588999999999999999998653 4
Q ss_pred eccEEEEeeCCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhc-ccc
Q psy6866 272 PADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTN-RLE 350 (961)
Q Consensus 272 PaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~-~~~ 350 (961)
=+|=-.|.|++.-+.-..-..+..|.. ..+.+-....+..|+...-=...|.=+..|.-. ++..... ...
T Consensus 186 ~VdeS~LTGES~pv~K~~~~~~~~~~~------~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~---~~~~~~~~~~~ 256 (997)
T TIGR01106 186 KVDNSSLTGESEPQTRSPEFTHENPLE------TRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIA---SLASGLENGKT 256 (997)
T ss_pred EEEccccCCCCCceeccCCCcccCccc------cCCeEEeccEeeeeeEEEEEEEccccchhhHHH---hhhhhcccCCC
Confidence 455555566553333211000111211 011111222355554322111222233333222 1111111 111
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHH
Q psy6866 351 KKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTA 420 (961)
Q Consensus 351 ~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~ 420 (961)
+-...+++..+.+..+..++++++.++.++....+...+...+..+++.+=.+.|..+++++..+.....
T Consensus 257 pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~ 326 (997)
T TIGR01106 257 PIAIEIEHFIHIITGVAVFLGVSFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMA 326 (997)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHH
Confidence 1123445556666666555555444444433322222334455555566677788888888887765433
No 186
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=60.05 E-value=33 Score=35.68 Aligned_cols=92 Identities=15% Similarity=0.142 Sum_probs=57.4
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++-+++.++++.+++. +++.++|--....+....+++|+...- +.++.++. .....
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~F--d~v~~s~~---------------------~g~~K 154 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYF--DAVFISED---------------------VGVAK 154 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhh--heEEEecc---------------------cccCC
Confidence 5677889999999988 999999998888888888999964321 11111111 12233
Q ss_pred HHHH--HHHHHHHhhcCCEEEEEcCCC-CCHhhhhhCCe
Q psy6866 743 PLQK--LRIVELYQSLDEIVAVTGDGV-NDAPALKKADI 778 (961)
Q Consensus 743 p~~K--~~iv~~l~~~g~~V~~vGDG~-ND~~al~~Adv 778 (961)
|..+ ..+.+.+.-..+.++||||.. ||+..-++++.
T Consensus 155 P~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~ 193 (229)
T COG1011 155 PDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGM 193 (229)
T ss_pred CCcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCc
Confidence 3222 233333333356799999975 78444455554
No 187
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=56.69 E-value=21 Score=35.59 Aligned_cols=85 Identities=15% Similarity=0.158 Sum_probs=52.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++ ++.++|.-+........+.+|+...- ..++++++ +-..+-.
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f---d~v~~~~~------------------~~~~KP~ 141 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF---DRAFSVDT------------------VRAYKPD 141 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH---hhhccHhh------------------cCCCCCC
Confidence 57889988888 36789998888888888888874311 01111111 0112334
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhh
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKK 775 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~ 775 (961)
|+-=....+.+.-..+.+.||||+..|+.+-++
T Consensus 142 p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 142 PVVYELVFDTVGLPPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred HHHHHHHHHHHCCCHHHeEeEecChhhHHHHhc
Confidence 443344445554444568899999999887554
No 188
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=56.64 E-value=28 Score=41.44 Aligned_cols=40 Identities=18% Similarity=0.333 Sum_probs=32.2
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCCH------------HHHHHHHHHcCCC
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDHP------------CTAKAIAIKCHIL 703 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~~------------~ta~~ia~~~gi~ 703 (961)
+-|++.++++.|++.|++++++|.-.. ..+..+.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999997443 3466677777763
No 189
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=56.62 E-value=3e+02 Score=35.32 Aligned_cols=80 Identities=11% Similarity=0.174 Sum_probs=49.4
Q ss_pred HHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCe------------eEE----EECCeEEEEECCCcccceEEEecCC
Q psy6866 205 GIILALTCIVTGMFSFYQERKSSHITESFAKMIPTR------------ATV----IRNGSVKEIDSAGLVRGDIVLLKIG 268 (961)
Q Consensus 205 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~------------~~V----~R~G~~~~I~~~eLv~GDIV~l~~G 268 (961)
.+++++..+++.+.++..+ ++.+.++++....... ..| +.-|....+...|.+|-|.+.++ |
T Consensus 95 ~~iv~~~~~i~~~~e~~a~-ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~-g 172 (867)
T TIGR01524 95 ALMVLASGLLGFIQESRAE-RAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVIS-A 172 (867)
T ss_pred hhHHHHHHHHHHHHHHHHH-HHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEe-c
Confidence 3444445555555565554 6666666665433222 222 23588999999999999999887 4
Q ss_pred CeeeccEEEEeeCCceee
Q psy6866 269 DKVPADIRLIEIQDLKAE 286 (961)
Q Consensus 269 d~IPaD~ill~g~~l~vd 286 (961)
.-+=+|=-.+.|++.-|+
T Consensus 173 ~~l~VDES~LTGES~PV~ 190 (867)
T TIGR01524 173 RDLFINQSALTGESLPVE 190 (867)
T ss_pred CceEEEcccccCCCCccc
Confidence 445667666777664443
No 190
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=56.45 E-value=1.3e+02 Score=37.83 Aligned_cols=192 Identities=17% Similarity=0.158 Sum_probs=88.5
Q ss_pred HHHHhhHhHHHHHHHHHHHHHHHHHhccC-----CCe-eEE----EECCeEEEEECCCcccceEEEecCCCeeeccEEEE
Q psy6866 209 ALTCIVTGMFSFYQERKSSHITESFAKMI-----PTR-ATV----IRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLI 278 (961)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-----~~~-~~V----~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill 278 (961)
++...+..+-+ ++..++.+.+.++.... ..+ ..| +.-|....+...|.+|-|.+.++ |+..-+|=-.+
T Consensus 66 ~i~~~i~~~qe-~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~-g~~~~VDeS~L 143 (755)
T TIGR01647 66 LLNATIGFIEE-NKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFE-GDYIQVDQAAL 143 (755)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEe-cCceEEEcccc
Confidence 33344444444 45445555555553321 122 222 34588999999999999999886 33355565556
Q ss_pred eeCCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhcccc-CCCCchH
Q psy6866 279 EIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLE-KKTTPIE 357 (961)
Q Consensus 279 ~g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~-~~~s~l~ 357 (961)
.|++.-|+-. +|+. + ..|.. +..|+-...=...|-=+..|.- .++........ +-...+.
T Consensus 144 TGES~PV~K~--~~~~--v--~aGT~----------v~~G~~~~~V~~tG~~T~~g~i---~~lv~~~~~~~~~lq~~~~ 204 (755)
T TIGR01647 144 TGESLPVTKK--TGDI--A--YSGST----------VKQGEAEAVVTATGMNTFFGKA---AALVQSTETGSGHLQKILS 204 (755)
T ss_pred cCCccceEec--cCCe--e--eccCE----------EEccEEEEEEEEcCCccHHHHH---HHHhhccCCCCCcHHHHHH
Confidence 6655433321 2211 1 11221 2233322111111111112211 11111111111 1111233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHH
Q psy6866 358 QEVQHFMRLISMWALTLGAICFL-LALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAK 421 (961)
Q Consensus 358 ~~~~~~~~~l~~i~~~~~~i~~i-~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~ 421 (961)
+....+......+++++.++.+. ...-+...+...+..++...=.+.|.++++++..+....++
T Consensus 205 ~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak 269 (755)
T TIGR01647 205 KIGLFLIVLIGVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAK 269 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHh
Confidence 33344444433333333333333 21111223445666777777888999999988888765553
No 191
>PTZ00174 phosphomannomutase; Provisional
Probab=55.62 E-value=15 Score=39.29 Aligned_cols=36 Identities=17% Similarity=0.194 Sum_probs=30.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAI 698 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~ 698 (961)
++.+.+.++|+++++.|++++++||+.........+
T Consensus 22 ~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~ 57 (247)
T PTZ00174 22 PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLG 57 (247)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHh
Confidence 477889999999999999999999999886655443
No 192
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=55.10 E-value=1.4e+02 Score=36.85 Aligned_cols=40 Identities=15% Similarity=0.245 Sum_probs=29.2
Q ss_pred EECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCCcee
Q psy6866 244 IRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKA 285 (961)
Q Consensus 244 ~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~l~v 285 (961)
++-|....+...|.+|.|-..++ |. .-+|=-.+.|++.-|
T Consensus 123 Lv~GDiV~v~~Gd~IPaDG~vie-G~-~~VDESaLTGES~PV 162 (673)
T PRK14010 123 LKKGHIVRVATGEQIPNDGKVIK-GL-ATVDESAITGESAPV 162 (673)
T ss_pred cCCCCEEEECCCCcccCCeEEEE-cc-eEEecchhcCCCCce
Confidence 35688999999999999988776 43 366766666666434
No 193
>KOG3040|consensus
Probab=54.62 E-value=25 Score=35.86 Aligned_cols=51 Identities=16% Similarity=0.238 Sum_probs=42.8
Q ss_pred eEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH---cCCC
Q psy6866 653 RLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIK---CHIL 703 (961)
Q Consensus 653 ~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~---~gi~ 703 (961)
.+-|.+-++|..-|++.++++.|+..+.+|..+|.-..+.-+.+.++ ||+.
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 35599999999999999999999999999999998877766666544 5664
No 194
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=54.21 E-value=43 Score=36.82 Aligned_cols=145 Identities=17% Similarity=0.223 Sum_probs=80.9
Q ss_pred ecCCCCCChHHHHHHHHHcCCE---EEEEcCCCHHHHH------HHHHHcCCCCCCC------C----------------
Q psy6866 660 LYDPPRPAVPDAIDACHKAGIR---VIMVTGDHPCTAK------AIAIKCHILSETS------S---------------- 708 (961)
Q Consensus 660 ~~D~lr~~~~~~I~~l~~agi~---v~m~TGD~~~ta~------~ia~~~gi~~~~~------~---------------- 708 (961)
+.++++++.++.++.+++.|++ .++.-||++.... ..|+++||..... .
T Consensus 12 iA~~i~~~lk~~i~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~ 91 (301)
T PRK14194 12 AAARVLAQVREDVRTLKAAGIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPS 91 (301)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCC
Confidence 3456778888888888887775 3556687766543 3566778743110 0
Q ss_pred -CceeEe------------------chhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhh--cCCEEEEEcCC-
Q psy6866 709 -DDNVFT------------------GTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQS--LDEIVAVTGDG- 766 (961)
Q Consensus 709 -~~~v~~------------------g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~--~g~~V~~vGDG- 766 (961)
+.+++. -+|.+-++...+..+....+ -|.-|||..=.++++...- .|..|+++|-|
T Consensus 92 V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~--~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ 169 (301)
T PRK14194 92 VNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQGRD--VLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSN 169 (301)
T ss_pred CCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcCCC--CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCC
Confidence 011111 11112222333334433322 4778888777777776643 48999999997
Q ss_pred CCCHh---hhhhCCeeEeecCCcc---HhhhhccceEeecCCchHH
Q psy6866 767 VNDAP---ALKKADIGIAMGITGS---EVSKQTADMILMDDNFASI 806 (961)
Q Consensus 767 ~ND~~---al~~AdvGIamg~~g~---~~a~~aad~vl~~~~~~~i 806 (961)
.-=.| +|..++..+.+-.+.+ ..+-..||+++.--.-...
T Consensus 170 ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsavg~~~~ 215 (301)
T PRK14194 170 IVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAAVGRPRL 215 (301)
T ss_pred ccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEecCChhc
Confidence 44444 4666666665432222 2234568998875433333
No 195
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=51.82 E-value=4.1e+02 Score=34.33 Aligned_cols=209 Identities=11% Similarity=0.080 Sum_probs=99.5
Q ss_pred hhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCC------------eeEE----EECCeEEEEECCCcccceEEEe
Q psy6866 202 LWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPT------------RATV----IRNGSVKEIDSAGLVRGDIVLL 265 (961)
Q Consensus 202 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~------------~~~V----~R~G~~~~I~~~eLv~GDIV~l 265 (961)
+.+.+++++..++..+-++ +..++.+.++++...... ...| +.-|....+...|.+|-|.+.+
T Consensus 115 ~iI~~~v~l~~~i~~~qe~-~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li 193 (903)
T PRK15122 115 IIILTMVLLSGLLRFWQEF-RSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLI 193 (903)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEE
Confidence 3444455555555555454 444555556665433221 1222 2358899999999999999988
Q ss_pred cCCCeeeccEEEEeeCCceeeccCc------------cccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEc
Q psy6866 266 KIGDKVPADIRLIEIQDLKAENSSL------------TGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILT 333 (961)
Q Consensus 266 ~~Gd~IPaD~ill~g~~l~vdeS~L------------TGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~t 333 (961)
+.. -+=+|=-.|.|++.-|+-... .|+..+. ++ ..+..-....+..|+....=...|.=++.
T Consensus 194 ~g~-~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~----~~-~~n~vfaGT~V~~G~~~~~V~atG~~T~~ 267 (903)
T PRK15122 194 ESR-DLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSL----LD-LPNICFMGTNVVSGTATAVVVATGSRTYF 267 (903)
T ss_pred EcC-ceEEEccccCCCCcceeeeccccccccccccccccccCCc----cc-ccceEEeCCEEEeeeEEEEEEEeccccHh
Confidence 743 355666666666644443321 1222221 11 11112222335566543221122222222
Q ss_pred CCcChhhhHHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHH
Q psy6866 334 GSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLT 413 (961)
Q Consensus 334 G~~T~~g~i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~ 413 (961)
|.=...-+-.+.....+.+-.++.+.+.+++.++++++++++.+.. .-+...+...+..++...-.+.|..+++++.
T Consensus 268 gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~---~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La 344 (903)
T PRK15122 268 GSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTK---GDWLEALLFALAVAVGLTPEMLPMIVSSNLA 344 (903)
T ss_pred hHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc---CCHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 2111000000000011111123455566666666555544443221 1112233455666677777778888888888
Q ss_pred HHHHHHH
Q psy6866 414 VSLTLTA 420 (961)
Q Consensus 414 ~~l~~~~ 420 (961)
.+....+
T Consensus 345 ~g~~~ma 351 (903)
T PRK15122 345 KGAIAMA 351 (903)
T ss_pred HHHHHHH
Confidence 7765444
No 196
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=51.49 E-value=51 Score=35.92 Aligned_cols=65 Identities=14% Similarity=0.255 Sum_probs=40.6
Q ss_pred EEeecCHHHHHHHHHHHhh--cCCEEEEEcC-CCCCHh---hhhhCCeeEeecCCccH---hhhhccceEeecC
Q psy6866 737 VFARTSPLQKLRIVELYQS--LDEIVAVTGD-GVNDAP---ALKKADIGIAMGITGSE---VSKQTADMILMDD 801 (961)
Q Consensus 737 v~ar~~p~~K~~iv~~l~~--~g~~V~~vGD-G~ND~~---al~~AdvGIamg~~g~~---~a~~aad~vl~~~ 801 (961)
-|.-|||..=.++++...- .|..|+++|- |.-=.| +|.+++.-+.+-.+.++ ..-..||+++.--
T Consensus 136 ~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~av 209 (284)
T PRK14179 136 VMIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVAI 209 (284)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEec
Confidence 4778899876666666542 4899999999 555555 45555554444212222 2346789988643
No 197
>PLN03190 aminophospholipid translocase; Provisional
Probab=50.63 E-value=46 Score=43.93 Aligned_cols=64 Identities=22% Similarity=0.314 Sum_probs=40.9
Q ss_pred hHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhcc-C-CC-eeEE----EECCeEEEEECCCcccceEEEecC
Q psy6866 203 WLGIILALTCIVTGMFSFYQERKSSHITESFAKM-I-PT-RATV----IRNGSVKEIDSAGLVRGDIVLLKI 267 (961)
Q Consensus 203 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~-~~-~~~V----~R~G~~~~I~~~eLv~GDIV~l~~ 267 (961)
.+.+++++. .+...++.++++++++..+.-.-. . .. ...+ ++-|....+...|.+|-|.+.+..
T Consensus 142 PL~~vl~v~-~ike~~Ed~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~S 212 (1178)
T PLN03190 142 PLAFVLLVT-AVKDAYEDWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLST 212 (1178)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEec
Confidence 444454444 445566667777777666543322 1 11 1222 356999999999999999999974
No 198
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=46.46 E-value=1.4e+02 Score=28.27 Aligned_cols=45 Identities=20% Similarity=0.319 Sum_probs=29.1
Q ss_pred EEeecCH-HHHHHHHHHHhhcCCEEEEEcCCCC--CHhhhhhCCeeEeec
Q psy6866 737 VFARTSP-LQKLRIVELYQSLDEIVAVTGDGVN--DAPALKKADIGIAMG 783 (961)
Q Consensus 737 v~ar~~p-~~K~~iv~~l~~~g~~V~~vGDG~N--D~~al~~AdvGIamg 783 (961)
++++..+ -. .++++.+ ..-+.|...|-|.| |..++++-+|-++-.
T Consensus 42 ii~~~~~~~~-~~~l~~~-~~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 42 IIVGSGTPLT-AEVLEAA-PNLKLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp EEESTTSTBS-HHHHHHH-TT-SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred EEEcCCCCcC-HHHHhcc-ceeEEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 4455444 33 3455555 34457888899998 788999999888754
No 199
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=45.10 E-value=65 Score=35.42 Aligned_cols=65 Identities=14% Similarity=0.183 Sum_probs=40.0
Q ss_pred EEeecCHHHHHHHHHHHh--hcCCEEEEEcCC-CCCHh---hhhhCCeeEeecCC---ccHhhhhccceEeecC
Q psy6866 737 VFARTSPLQKLRIVELYQ--SLDEIVAVTGDG-VNDAP---ALKKADIGIAMGIT---GSEVSKQTADMILMDD 801 (961)
Q Consensus 737 v~ar~~p~~K~~iv~~l~--~~g~~V~~vGDG-~ND~~---al~~AdvGIamg~~---g~~~a~~aad~vl~~~ 801 (961)
.|.-|||..=.++++... -.|..|+++|-+ .-=.| +|..++..+.+-.+ ..+.+...||+++.--
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIsav 209 (296)
T PRK14188 136 ALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVAAV 209 (296)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEEec
Confidence 467888877777766653 258999999954 33333 45566666654411 1223445689887643
No 200
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=45.04 E-value=24 Score=38.12 Aligned_cols=45 Identities=20% Similarity=0.338 Sum_probs=39.1
Q ss_pred eeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc
Q psy6866 656 GLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKC 700 (961)
Q Consensus 656 G~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~ 700 (961)
|.+.--+.+=|++.++|+.|+++|++++++|.....+...+++++
T Consensus 17 Gvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 17 GVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred CceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 778888899999999999999999999999998887777555543
No 201
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=43.71 E-value=5e+02 Score=33.63 Aligned_cols=200 Identities=13% Similarity=0.117 Sum_probs=100.7
Q ss_pred hHHHHHHHHHHHHHHHHHhccCCC------eeEE----EECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCCcee
Q psy6866 216 GMFSFYQERKSSHITESFAKMIPT------RATV----IRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKA 285 (961)
Q Consensus 216 ~~~~~~~~~~~~~~~~~l~~l~~~------~~~V----~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~l~v 285 (961)
+....++..++-+.++++...... ...+ +.-|....+...|.+|-|...|+..+ .=+|=-.|.|++.-+
T Consensus 120 g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~-l~VdEs~LTGES~pv 198 (917)
T COG0474 120 GFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD-LEVDESALTGESLPV 198 (917)
T ss_pred HHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC-ceEEcccccCCCcch
Confidence 466667776777777766655432 2222 34588999999999999999999877 555555566655333
Q ss_pred ecc--CccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHHHH
Q psy6866 286 ENS--SLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHF 363 (961)
Q Consensus 286 deS--~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~~ 363 (961)
+-. ..++|..|... ...+-+-+...+..|.-..--...|.-+..|..+..-.-.. ....+-...+.+....+
T Consensus 199 ~K~~~~~~~~~~~~~~----d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~--~~~t~l~~~l~~~~~~l 272 (917)
T COG0474 199 EKQALPLTKSDAPLGL----DRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKK--EVKTPLQRKLNKLGKFL 272 (917)
T ss_pred hccccccccccccccC----CccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhcccc--ccCCcHHHHHHHHHHHH
Confidence 221 12223334330 11122223334666653332233444444454442222110 01111111122222223
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHH
Q psy6866 364 MRLISMWALTLGAICFLLALY-IGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKR 422 (961)
Q Consensus 364 ~~~l~~i~~~~~~i~~i~~~~-~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~ 422 (961)
..+.....+++.++.+..... +...+..++..+++++=-+.|..+-+++.++...-.++
T Consensus 273 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~ 332 (917)
T COG0474 273 LVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKD 332 (917)
T ss_pred HHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhc
Confidence 322222222222222222111 22345567777778888888888888888776655543
No 202
>KOG0208|consensus
Probab=41.52 E-value=2.7e+02 Score=35.36 Aligned_cols=230 Identities=10% Similarity=0.018 Sum_probs=125.4
Q ss_pred HHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeC------
Q psy6866 208 LALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQ------ 281 (961)
Q Consensus 208 i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~------ 281 (961)
-.++++++.+.-+..-+..++...+++++. ++- .+..=++.|-...|...|.+|-|+.++...
T Consensus 217 A~cI~iisv~Si~~sv~e~r~qs~rlr~mv-------~~~----~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~Pc 285 (1140)
T KOG0208|consen 217 AFCIVIISVYSIVLSVYETRKQSIRLRSMV-------KFT----CPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPC 285 (1140)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCC----ceEEEEECCEEEEEeccccccccEEEECCCCeEeec
Confidence 445556665555666677777788887762 222 233336679999999999999999999863
Q ss_pred -CceeeccCccccccceeccCCCCCCcccc-Ccce----Eee-----eeeeeeeceEEEEEEcCCcChhhhHHhh-----
Q psy6866 282 -DLKAENSSLTGEVEPVTCTLGATNSFAVE-SRNL----VFF-----STNLVSGSGKGVVILTGSNTVMGKIAGL----- 345 (961)
Q Consensus 282 -~l~vdeS~LTGEs~pv~k~~~~~~~~~~~-~~n~----l~~-----Gt~v~~G~~~~vV~~tG~~T~~g~i~~~----- 345 (961)
++.++-+.++-||+.---+ -+....+++ ..+. .+. -..+..|+-...+-..+....++...+.
T Consensus 286 Da~Li~g~civNEsmLTGES-VPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~ 364 (1140)
T KOG0208|consen 286 DALLISGDCIVNESMLTGES-VPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTT 364 (1140)
T ss_pred ceEEEeCcEEeecccccCCc-ccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEecccccc
Confidence 2556667777788764211 111233332 1111 111 1123345555555555555544432221
Q ss_pred ---hccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHH
Q psy6866 346 ---TNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKR 422 (961)
Q Consensus 346 ---~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~ 422 (961)
+-..--.+.|...++-+-+..+.....+++++.|+...+.-......+-..+.--.-.+-.-.|-|++.++..+...
T Consensus 365 KGqLVRsilyPkP~~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~ 444 (1140)
T KOG0208|consen 365 KGQLVRSILYPKPVNFKFYRDSFKFILFLVIIALIGFIYTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIY 444 (1140)
T ss_pred ccHHHHhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHH
Confidence 00111234455566666666665555556666555443321111111111111122235666788999999988765
Q ss_pred hhcccccccccchhhhccceeEEEecCcCccccCceEEE
Q psy6866 423 LASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVL 461 (961)
Q Consensus 423 l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~ 461 (961)
. .-.|-+....|.--+--=..|++.+.
T Consensus 445 a------------~~RLkkk~IfCisP~rIn~~G~i~~~ 471 (1140)
T KOG0208|consen 445 A------------QSRLKKKGIFCISPQRINLCGKLNLV 471 (1140)
T ss_pred H------------HHHHHhcCeEEcCccceeecceeeEE
Confidence 4 34566677888877655556665553
No 203
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=41.44 E-value=7.7e+02 Score=31.78 Aligned_cols=79 Identities=9% Similarity=0.072 Sum_probs=46.6
Q ss_pred HHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCC-----CeeEEE-----ECCeEEEEECCCcccceEEEecCCCeeecc
Q psy6866 205 GIILALTCIVTGMFSFYQERKSSHITESFAKMIP-----TRATVI-----RNGSVKEIDSAGLVRGDIVLLKIGDKVPAD 274 (961)
Q Consensus 205 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-----~~~~V~-----R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD 274 (961)
.+++++.++++.+-++ +..++-+.+.++..... .+...+ .-|....+...|.+|-|.+.++.. ..=+|
T Consensus 87 ~~~i~~~~~i~~~qe~-~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~-~l~VD 164 (884)
T TIGR01522 87 TLAILIVVTVGFVQEY-RSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAV-DLSID 164 (884)
T ss_pred HhHHHHHHHHHHHHHH-HHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcC-ceEEE
Confidence 3444444555555555 44455555665543322 222222 348899999999999999999753 34466
Q ss_pred EEEEeeCCcee
Q psy6866 275 IRLIEIQDLKA 285 (961)
Q Consensus 275 ~ill~g~~l~v 285 (961)
=-.+.|++.-+
T Consensus 165 ES~LTGES~pv 175 (884)
T TIGR01522 165 ESNLTGETTPV 175 (884)
T ss_pred cccccCCCcce
Confidence 66666665433
No 204
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=41.18 E-value=79 Score=34.72 Aligned_cols=139 Identities=12% Similarity=0.201 Sum_probs=76.8
Q ss_pred CCCCCChHHHHHHHHHc-CCE---EEEEcCCCHHHH------HHHHHHcCCCCCCCC-----------------------
Q psy6866 662 DPPRPAVPDAIDACHKA-GIR---VIMVTGDHPCTA------KAIAIKCHILSETSS----------------------- 708 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~a-gi~---v~m~TGD~~~ta------~~ia~~~gi~~~~~~----------------------- 708 (961)
+.++++.++.++.+++. |++ +++..||++... ...|+++||......
T Consensus 11 ~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V 90 (295)
T PRK14174 11 LDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKIEDLNNDPDV 90 (295)
T ss_pred HHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCC
Confidence 45677778888888766 554 456678776543 345677787431100
Q ss_pred CceeEe------------------chhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhh--cCCEEEEEcCCCC
Q psy6866 709 DDNVFT------------------GTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQS--LDEIVAVTGDGVN 768 (961)
Q Consensus 709 ~~~v~~------------------g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~--~g~~V~~vGDG~N 768 (961)
+.+++. .+|.+-++...+..+.......-|.-|||..=.++++...- .|..|+++|.+..
T Consensus 91 ~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~i 170 (295)
T PRK14174 91 HGILVQQPLPKQIDEFAVTLAIDPAKDVDGFHPENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKHCVVVGRSNI 170 (295)
T ss_pred CEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCc
Confidence 011111 11222223333444443321124677899876666666542 4899999999864
Q ss_pred C---Hh-hhh------hCCeeEeecCCccH--hhhhccceEeecC
Q psy6866 769 D---AP-ALK------KADIGIAMGITGSE--VSKQTADMILMDD 801 (961)
Q Consensus 769 D---~~-al~------~AdvGIamg~~g~~--~a~~aad~vl~~~ 801 (961)
= .. ||. .|.|-++-. ...+ ..-..||+++..-
T Consensus 171 VG~Pla~lL~~~~~~~~atVt~~hs-~t~~l~~~~~~ADIvI~Av 214 (295)
T PRK14174 171 VGKPMANLMLQKLKESNCTVTICHS-ATKDIPSYTRQADILIAAI 214 (295)
T ss_pred chHHHHHHHHhccccCCCEEEEEeC-CchhHHHHHHhCCEEEEec
Confidence 2 22 442 466666654 2222 3456789998754
No 205
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=40.87 E-value=82 Score=34.36 Aligned_cols=138 Identities=13% Similarity=0.187 Sum_probs=77.4
Q ss_pred cCCCCCChHHHHHHHHHcCCE---EEEEcCCCHHHH------HHHHHHcCCCCCCCC-----------------------
Q psy6866 661 YDPPRPAVPDAIDACHKAGIR---VIMVTGDHPCTA------KAIAIKCHILSETSS----------------------- 708 (961)
Q Consensus 661 ~D~lr~~~~~~I~~l~~agi~---v~m~TGD~~~ta------~~ia~~~gi~~~~~~----------------------- 708 (961)
.+.++++.++.++.+++.|++ +.+..||++... ...|+++||......
T Consensus 11 A~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V 90 (284)
T PRK14170 11 AKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTI 90 (284)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCC
Confidence 346777888889999887875 456778887654 346777887432100
Q ss_pred CceeEe------------------chhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhh--cCCEEEEEcCCCC
Q psy6866 709 DDNVFT------------------GTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQS--LDEIVAVTGDGVN 768 (961)
Q Consensus 709 ~~~v~~------------------g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~--~g~~V~~vGDG~N 768 (961)
+.+++. .+|.+-++...+..+....+ -|.-|||..=.++++...- .|..|+++|-|..
T Consensus 91 ~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~p~N~g~l~~~~~--~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~i 168 (284)
T PRK14170 91 HGILVQLPLPEHISEEKVIDTISYDKDVDGFHPVNVGNLFIGKD--SFVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNI 168 (284)
T ss_pred CeEEEecCCCCCCCHHHHHhccCcccCcccCChhhhhHHhCCCC--CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCc
Confidence 011111 11112222333333333322 3678888777777666542 4889999999854
Q ss_pred C----Hhhhhh--CCeeEeecCCccH---hhhhccceEeecCC
Q psy6866 769 D----APALKK--ADIGIAMGITGSE---VSKQTADMILMDDN 802 (961)
Q Consensus 769 D----~~al~~--AdvGIamg~~g~~---~a~~aad~vl~~~~ 802 (961)
= +.+|.. |-|-++-. .|. ..-..||+++..-.
T Consensus 169 VGkPla~lL~~~~atVtichs--~T~~l~~~~~~ADIvI~AvG 209 (284)
T PRK14170 169 VGKPVAQLLLNENATVTIAHS--RTKDLPQVAKEADILVVATG 209 (284)
T ss_pred chHHHHHHHHHCCCEEEEeCC--CCCCHHHHHhhCCEEEEecC
Confidence 1 224543 45555443 332 23456899886543
No 206
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=40.67 E-value=4.9e+02 Score=33.60 Aligned_cols=41 Identities=12% Similarity=0.246 Sum_probs=30.6
Q ss_pred ECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCCceee
Q psy6866 245 RNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAE 286 (961)
Q Consensus 245 R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~l~vd 286 (961)
.-|....+...|.+|-|.+.++. .-+=+|=-.+.|++.-|+
T Consensus 184 vpGDiV~l~~Gd~IPaDg~li~g-~~l~VDES~LTGES~PV~ 224 (902)
T PRK10517 184 VPGDIIKLAAGDMIPADLRILQA-RDLFVAQASLTGESLPVE 224 (902)
T ss_pred CCCCEEEECCCCEEeeeEEEEEc-CceEEEecCcCCCCCcee
Confidence 35889999999999999988864 445567666667665444
No 207
>COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]
Probab=39.51 E-value=48 Score=40.09 Aligned_cols=75 Identities=21% Similarity=0.302 Sum_probs=45.9
Q ss_pred EECCCcccceEEEe-cCCCeee-ccEEEEeeCCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEE
Q psy6866 252 IDSAGLVRGDIVLL-KIGDKVP-ADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGV 329 (961)
Q Consensus 252 I~~~eLv~GDIV~l-~~Gd~IP-aD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~v 329 (961)
|.-.+|.+||-|.| ++||+|| .++++.+-. +|+..|..- | .++-.+||.+......+.
T Consensus 363 I~rkdIrIGDtV~V~kAGdVIP~V~~Vv~e~R---------~~~~~~~~~-P----------~~CP~C~s~l~r~~~e~~ 422 (667)
T COG0272 363 IKRKDIRIGDTVVVRKAGDVIPQVVGVVLEKR---------PGNEKPIPF-P----------THCPVCGSELVREEGEVV 422 (667)
T ss_pred HHhcCCCCCCEEEEEecCCCCcceeeeecccC---------CCCCCCCCC-C----------CCCCCCCCeeEeccCcee
Confidence 34578999998888 5799999 455554422 233333220 0 111247888887666677
Q ss_pred EEEcCCcChhhhHHhhh
Q psy6866 330 VILTGSNTVMGKIAGLT 346 (961)
Q Consensus 330 V~~tG~~T~~g~i~~~~ 346 (961)
.-+++..++-++....+
T Consensus 423 ~rC~n~~~C~aq~~e~l 439 (667)
T COG0272 423 IRCTNGLNCPAQLKERL 439 (667)
T ss_pred EecCCCCCChHHHhhhe
Confidence 77788666666655443
No 208
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=38.94 E-value=1e+02 Score=33.64 Aligned_cols=138 Identities=10% Similarity=0.186 Sum_probs=76.4
Q ss_pred CCCCCChHHHHHHHHHcCCE---EEEEcCCCHHHH------HHHHHHcCCCCCCCC-----------------------C
Q psy6866 662 DPPRPAVPDAIDACHKAGIR---VIMVTGDHPCTA------KAIAIKCHILSETSS-----------------------D 709 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~---v~m~TGD~~~ta------~~ia~~~gi~~~~~~-----------------------~ 709 (961)
+.++++.++.++.+++.|++ ..++-||++... ...|+++||...... +
T Consensus 11 ~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~ 90 (282)
T PRK14169 11 KKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHDPDVD 90 (282)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCC
Confidence 45677888888888877765 456668876644 335677887431100 0
Q ss_pred ceeEe------------------chhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhh--cCCEEEEEcCCCC-
Q psy6866 710 DNVFT------------------GTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQS--LDEIVAVTGDGVN- 768 (961)
Q Consensus 710 ~~v~~------------------g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~--~g~~V~~vGDG~N- 768 (961)
.+++. .+|.+-++...+..+....+ -|.-|||..=.++++.+.- .|..|+++|.+..
T Consensus 91 GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~--~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iV 168 (282)
T PRK14169 91 AILVQLPLPAGLDEQAVIDAIDPDKDVDGFSPVSVGRLWANEP--TVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIV 168 (282)
T ss_pred EEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhHHHhcCCC--CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccc
Confidence 11111 11112222333334433322 4678888877777776642 5889999999854
Q ss_pred ---CHhhhhhCCeeEeecCCccH---hhhhccceEeecC
Q psy6866 769 ---DAPALKKADIGIAMGITGSE---VSKQTADMILMDD 801 (961)
Q Consensus 769 ---D~~al~~AdvGIamg~~g~~---~a~~aad~vl~~~ 801 (961)
=+.||...+.-+.+..+-+. ..-..||+++..-
T Consensus 169 GkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~Av 207 (282)
T PRK14169 169 GRPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVVAV 207 (282)
T ss_pred hHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEcc
Confidence 12355444444443322332 2345689988654
No 209
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=38.75 E-value=1.1e+02 Score=33.41 Aligned_cols=139 Identities=16% Similarity=0.152 Sum_probs=76.3
Q ss_pred cCCCCCChHHHHHHHHHcCCE---EEEEcCCCHHHH------HHHHHHcCCCCCCC------C-----------------
Q psy6866 661 YDPPRPAVPDAIDACHKAGIR---VIMVTGDHPCTA------KAIAIKCHILSETS------S----------------- 708 (961)
Q Consensus 661 ~D~lr~~~~~~I~~l~~agi~---v~m~TGD~~~ta------~~ia~~~gi~~~~~------~----------------- 708 (961)
.+.++++.++.++.+++.|++ .++.-||++... ...|+++||..... .
T Consensus 10 A~~i~~~ik~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~d~~V 89 (282)
T PRK14182 10 AAKVKGEVATEVRALAARGVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITSVEHHLPATTTQAELLALIARLNADPAV 89 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCC
Confidence 345677888888888887775 456668876644 34667788743210 0
Q ss_pred CceeEe------------------chhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHh--hcCCEEEEEcCCCC
Q psy6866 709 DDNVFT------------------GTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQ--SLDEIVAVTGDGVN 768 (961)
Q Consensus 709 ~~~v~~------------------g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~--~~g~~V~~vGDG~N 768 (961)
+.+++. -+|.+-++...+..+....+. -|.-|||..=.++++..+ -.|..|+++|.|..
T Consensus 90 ~GIivqlPLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~-~~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~i 168 (282)
T PRK14182 90 HGILVQLPLPKHVDERAVLDAISPAKDADGFHPFNVGALSIGIAG-VPRPCTPAGVMRMLDEARVDPKGKRALVVGRSNI 168 (282)
T ss_pred CEEEEeCCCCCCCCHHHHHhccCcccCcCCCCHhHHHHHhCCCCC-CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCc
Confidence 011111 111122233334444332221 167788877777776664 25889999999854
Q ss_pred ----CHhhhhh--CCeeEeecCCccHh---hhhccceEeecCC
Q psy6866 769 ----DAPALKK--ADIGIAMGITGSEV---SKQTADMILMDDN 802 (961)
Q Consensus 769 ----D~~al~~--AdvGIamg~~g~~~---a~~aad~vl~~~~ 802 (961)
=+.||.. |-|-++= +.+.. .-..||+++..-.
T Consensus 169 VGkPla~lL~~~~AtVtich--s~T~nl~~~~~~ADIvI~AvG 209 (282)
T PRK14182 169 VGKPMAMMLLERHATVTIAH--SRTADLAGEVGRADILVAAIG 209 (282)
T ss_pred chHHHHHHHHHCCCEEEEeC--CCCCCHHHHHhhCCEEEEecC
Confidence 1235543 4455543 33321 2346898886543
No 210
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=38.41 E-value=17 Score=31.59 Aligned_cols=22 Identities=36% Similarity=0.662 Sum_probs=15.9
Q ss_pred EECCCcccceEEEe-cCCCeeec
Q psy6866 252 IDSAGLVRGDIVLL-KIGDKVPA 273 (961)
Q Consensus 252 I~~~eLv~GDIV~l-~~Gd~IPa 273 (961)
+...+|.+||.|.| ++||.||-
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEE
T ss_pred HHHcCCCCCCEEEEEECCCccce
Confidence 33567999998888 67999995
No 211
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=37.46 E-value=45 Score=31.08 Aligned_cols=39 Identities=23% Similarity=0.377 Sum_probs=30.0
Q ss_pred CCCChHHHHHHHHHcCCE-EEEEcCCCHHHHHHHHHHcCC
Q psy6866 664 PRPAVPDAIDACHKAGIR-VIMVTGDHPCTAKAIAIKCHI 702 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~-v~m~TGD~~~ta~~ia~~~gi 702 (961)
+.+.+.+.+++|.+.|++ +|+.+|.....+...|++.|+
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi 103 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGI 103 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCC
Confidence 455689999999999996 999999999999999999887
No 212
>PRK11507 ribosome-associated protein; Provisional
Probab=36.94 E-value=38 Score=28.41 Aligned_cols=26 Identities=23% Similarity=0.282 Sum_probs=22.8
Q ss_pred EEEECCeEEEEECCCcccceEEEecC
Q psy6866 242 TVIRNGSVKEIDSAGLVRGDIVLLKI 267 (961)
Q Consensus 242 ~V~R~G~~~~I~~~eLv~GDIV~l~~ 267 (961)
.|..||+...-.-..|.|||+|.+..
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 46779999999999999999999864
No 213
>PTZ00445 p36-lilke protein; Provisional
Probab=35.27 E-value=56 Score=33.82 Aligned_cols=29 Identities=14% Similarity=0.055 Sum_probs=25.0
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHH
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPC 691 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ 691 (961)
.++|+.+..+++|+++||+|.++|=-...
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~ 103 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKE 103 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchh
Confidence 47999999999999999999999955443
No 214
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=34.62 E-value=23 Score=29.29 Aligned_cols=26 Identities=35% Similarity=0.450 Sum_probs=14.3
Q ss_pred EEECCeEEEEECCCcccceEEEecCCC
Q psy6866 243 VIRNGSVKEIDSAGLVRGDIVLLKIGD 269 (961)
Q Consensus 243 V~R~G~~~~I~~~eLv~GDIV~l~~Gd 269 (961)
|..||+...-....|.|||+|.+ .|.
T Consensus 35 V~VNGe~e~rrg~Kl~~GD~V~~-~~~ 60 (65)
T PF13275_consen 35 VKVNGEVETRRGKKLRPGDVVEI-DGE 60 (65)
T ss_dssp HEETTB----SS----SSEEEEE-TTE
T ss_pred eEECCEEccccCCcCCCCCEEEE-CCE
Confidence 55689888888999999999999 443
No 215
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=34.39 E-value=1.3e+02 Score=33.63 Aligned_cols=48 Identities=19% Similarity=0.200 Sum_probs=38.7
Q ss_pred eeeeecCCCCCChHHHHHHHHHc----CCEEEEEcCCC---HHH-HHHHHHHcCCC
Q psy6866 656 GLISLYDPPRPAVPDAIDACHKA----GIRVIMVTGDH---PCT-AKAIAIKCHIL 703 (961)
Q Consensus 656 G~i~~~D~lr~~~~~~I~~l~~a----gi~v~m~TGD~---~~t-a~~ia~~~gi~ 703 (961)
|++.-.+++-+++.++++.|+.. |+++..+|-.. ..+ +..+.+++|+.
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 77777888999999999999998 99999999654 333 55566778874
No 216
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=33.88 E-value=60 Score=27.32 Aligned_cols=57 Identities=19% Similarity=0.199 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCC-CCCHhhhhhCCeeEee---cCCccHhh---hhccceEee
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDG-VNDAPALKKADIGIAM---GITGSEVS---KQTADMILM 799 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG-~ND~~al~~AdvGIam---g~~g~~~a---~~aad~vl~ 799 (961)
|.-=..+.+.+.-....+.||||. ..|+.+=+++++--.+ |....+.. ...+|+|+.
T Consensus 7 p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~ 70 (75)
T PF13242_consen 7 PGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVD 70 (75)
T ss_dssp HHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEES
T ss_pred HHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEEC
Confidence 333344445554444568899999 9999999988864433 32222222 247788765
No 217
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=33.28 E-value=7.5e+02 Score=30.75 Aligned_cols=72 Identities=13% Similarity=0.104 Sum_probs=38.1
Q ss_pred hhHHHHHHHHHhhHhHHHHHHHHHHH-HHHHHHhccCCCeeEEEECCeEEEEECCCcccce-EEEecCCCeeeccEEEEe
Q psy6866 202 LWLGIILALTCIVTGMFSFYQERKSS-HITESFAKMIPTRATVIRNGSVKEIDSAGLVRGD-IVLLKIGDKVPADIRLIE 279 (961)
Q Consensus 202 ~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GD-IV~l~~Gd~IPaD~ill~ 279 (961)
+++.+.+.++++++.++..+.|..++ +..+.+.++... +......+ +.-|. ...+...+..|=|.++++
T Consensus 62 ~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l-----~~~~~a~v----ir~g~~~~~V~~~eL~~GDiV~v~ 132 (679)
T PRK01122 62 AGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGA-----KKDTFARK----LREPGAAEEVPATELRKGDIVLVE 132 (679)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCeEEE----EECCCEEEEEEHHHcCCCCEEEEc
Confidence 34556666666666666666555544 445555555321 11111111 12234 566777777777777776
Q ss_pred eCC
Q psy6866 280 IQD 282 (961)
Q Consensus 280 g~~ 282 (961)
.++
T Consensus 133 ~Gd 135 (679)
T PRK01122 133 AGE 135 (679)
T ss_pred CCC
Confidence 443
No 218
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=32.55 E-value=1.4e+02 Score=32.67 Aligned_cols=139 Identities=14% Similarity=0.218 Sum_probs=77.0
Q ss_pred CCCCCChHHHHHHHHHcCCE---EEEEcCCCHHHH------HHHHHHcCCCCCC------CC-----------------C
Q psy6866 662 DPPRPAVPDAIDACHKAGIR---VIMVTGDHPCTA------KAIAIKCHILSET------SS-----------------D 709 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~---v~m~TGD~~~ta------~~ia~~~gi~~~~------~~-----------------~ 709 (961)
+.++++.++.++.+++.|++ .++.-||++... ...|+++||.... .. +
T Consensus 11 ~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~ 90 (282)
T PRK14166 11 AKIKEELKEKNQFLKSKGIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALINTLNHDDSVH 90 (282)
T ss_pred HHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCC
Confidence 45677788888888877765 356668776544 3467778875210 00 0
Q ss_pred ceeEe------------------chhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhh--cCCEEEEEcCCCCC
Q psy6866 710 DNVFT------------------GTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQS--LDEIVAVTGDGVND 769 (961)
Q Consensus 710 ~~v~~------------------g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~--~g~~V~~vGDG~ND 769 (961)
.+++. .+|.+-++...+..+..... .-|.-|||..=.++++...- .|..|+++|-|..=
T Consensus 91 GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g~~-~~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iV 169 (282)
T PRK14166 91 GILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGLE-SGFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIV 169 (282)
T ss_pred EEEEeCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhcCCC-CCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcc
Confidence 11111 11112222333333432211 14678888877777776642 58899999998642
Q ss_pred ----HhhhhhCCeeEeecCCccHh---hhhccceEeecC
Q psy6866 770 ----APALKKADIGIAMGITGSEV---SKQTADMILMDD 801 (961)
Q Consensus 770 ----~~al~~AdvGIamg~~g~~~---a~~aad~vl~~~ 801 (961)
+.+|...|.-+.+-.+.|.. .-..||+++..-
T Consensus 170 GkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIsAv 208 (282)
T PRK14166 170 GRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAA 208 (282)
T ss_pred hHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcC
Confidence 33555555555443233332 345789988654
No 219
>PF15584 Imm44: Immunity protein 44
Probab=32.35 E-value=18 Score=31.70 Aligned_cols=19 Identities=21% Similarity=0.307 Sum_probs=15.6
Q ss_pred cceEEEecCCCeeeccEEE
Q psy6866 259 RGDIVLLKIGDKVPADIRL 277 (961)
Q Consensus 259 ~GDIV~l~~Gd~IPaD~il 277 (961)
+.+-..|+.|++|||||+-
T Consensus 13 ~~~~~~I~SG~~iP~~GIw 31 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIW 31 (94)
T ss_pred CCCCCEEecCCCcccCCeE
Confidence 3456688999999999985
No 220
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=31.77 E-value=2.6e+02 Score=30.24 Aligned_cols=29 Identities=10% Similarity=0.242 Sum_probs=17.9
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCCCCHhh
Q psy6866 744 LQKLRIVELYQSLDEIVAVTGDGVNDAPA 772 (961)
Q Consensus 744 ~~K~~iv~~l~~~g~~V~~vGDG~ND~~a 772 (961)
++-.++++.+++.-..-.++|-|+|+...
T Consensus 188 ~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~ 216 (263)
T CHL00200 188 KKLKKLIETIKKMTNKPIILGFGISTSEQ 216 (263)
T ss_pred HHHHHHHHHHHHhcCCCEEEECCcCCHHH
Confidence 44556677776654444456999985543
No 221
>PLN02645 phosphoglycolate phosphatase
Probab=31.45 E-value=2.7e+02 Score=30.88 Aligned_cols=41 Identities=10% Similarity=0.106 Sum_probs=27.5
Q ss_pred eecCHHHHHHHHHHHhhcCCEEEEEcCCC-CCHhhhhhCCee
Q psy6866 739 ARTSPLQKLRIVELYQSLDEIVAVTGDGV-NDAPALKKADIG 779 (961)
Q Consensus 739 ar~~p~~K~~iv~~l~~~g~~V~~vGDG~-ND~~al~~AdvG 779 (961)
.+-+|.-=..+.+.+.-..+.++||||.. +|..+=+.|++-
T Consensus 229 gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ 270 (311)
T PLN02645 229 GKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCK 270 (311)
T ss_pred CCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCC
Confidence 34444433344444444456789999997 999999999843
No 222
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=31.42 E-value=1.4e+02 Score=32.51 Aligned_cols=137 Identities=18% Similarity=0.253 Sum_probs=75.6
Q ss_pred cCCCCCChHHHHHHHHHcCCE---EEEEcCCCHHHH------HHHHHHcCCCCCCCC-----------------------
Q psy6866 661 YDPPRPAVPDAIDACHKAGIR---VIMVTGDHPCTA------KAIAIKCHILSETSS----------------------- 708 (961)
Q Consensus 661 ~D~lr~~~~~~I~~l~~agi~---v~m~TGD~~~ta------~~ia~~~gi~~~~~~----------------------- 708 (961)
.+.+|++.++.++.+++.|++ ..+.-||++... ...|+++||......
T Consensus 12 A~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V 91 (284)
T PRK14190 12 AKEKREQLKEEVVKLKEQGIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIYSELYEFPADITEEELLALIDRLNADPRI 91 (284)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCC
Confidence 445677788888888877764 344567776543 446677787431100
Q ss_pred CceeEe------------------chhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhh--cCCEEEEEcCCCC
Q psy6866 709 DDNVFT------------------GTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQS--LDEIVAVTGDGVN 768 (961)
Q Consensus 709 ~~~v~~------------------g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~--~g~~V~~vGDG~N 768 (961)
+.+++. .+|.+-++...+..+....+ -|.-|||..=.++++.+.- .|..|+++|-+.-
T Consensus 92 ~GIlvq~PLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~--~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~i 169 (284)
T PRK14190 92 NGILVQLPLPKHIDEKAVIERISPEKDVDGFHPINVGRMMLGQD--TFLPCTPHGILELLKEYNIDISGKHVVVVGRSNI 169 (284)
T ss_pred CEEEEeCCCCCCCCHHHHHhcCCccccccccCHhhHHHHhcCCC--CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCc
Confidence 011111 11222233333444443332 4778899877777777642 5889999998853
Q ss_pred C----Hhhhh--hCCeeEeecCCccH---hhhhccceEeecC
Q psy6866 769 D----APALK--KADIGIAMGITGSE---VSKQTADMILMDD 801 (961)
Q Consensus 769 D----~~al~--~AdvGIamg~~g~~---~a~~aad~vl~~~ 801 (961)
= +.+|. .|-|-++- +.+. ..-..||+++..-
T Consensus 170 VG~Pla~lL~~~~atVt~ch--s~t~~l~~~~~~ADIvI~Av 209 (284)
T PRK14190 170 VGKPVGQLLLNENATVTYCH--SKTKNLAELTKQADILIVAV 209 (284)
T ss_pred cHHHHHHHHHHCCCEEEEEe--CCchhHHHHHHhCCEEEEec
Confidence 1 22443 35555543 2332 2346788887643
No 223
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=31.35 E-value=2.1e+02 Score=31.24 Aligned_cols=137 Identities=16% Similarity=0.227 Sum_probs=75.9
Q ss_pred CCCCCChHHHHHHHHHc-CCE---EEEEcCCCHHHH------HHHHHHcCCCCCCCC-----------------------
Q psy6866 662 DPPRPAVPDAIDACHKA-GIR---VIMVTGDHPCTA------KAIAIKCHILSETSS----------------------- 708 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~a-gi~---v~m~TGD~~~ta------~~ia~~~gi~~~~~~----------------------- 708 (961)
..++++.++.++.+++. |++ .+++.||++... ...|+++||......
T Consensus 11 ~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V 90 (286)
T PRK14184 11 ATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLIAELNARPDI 90 (286)
T ss_pred HHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCcC
Confidence 35667777888888766 654 355677776643 345677777431100
Q ss_pred CceeEe------------------chhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhh--cCCEEEEEcCCCC
Q psy6866 709 DDNVFT------------------GTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQS--LDEIVAVTGDGVN 768 (961)
Q Consensus 709 ~~~v~~------------------g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~--~g~~V~~vGDG~N 768 (961)
+.+++. .+|.+-++...+..+....+ -|.-|||..=.++++.+.- .|..|+++|-+..
T Consensus 91 ~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~--~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~i 168 (286)
T PRK14184 91 DGILLQLPLPKGLDSQRCLELIDPAKDVDGFHPENMGRLALGLP--GFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNI 168 (286)
T ss_pred ceEEEecCCCCCCCHHHHHhccCcccCcccCCHhhHHHHhCCCC--CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcc
Confidence 011111 11222233333444443332 4778899877777766642 4889999999854
Q ss_pred C----Hhhhhh------CCeeEeecCCccH--hhhhccceEeecC
Q psy6866 769 D----APALKK------ADIGIAMGITGSE--VSKQTADMILMDD 801 (961)
Q Consensus 769 D----~~al~~------AdvGIamg~~g~~--~a~~aad~vl~~~ 801 (961)
= +.+|.. |.|-++-. ...+ ..-..||+++..-
T Consensus 169 VG~Pla~lL~~~~~~~~AtVt~~hs-~t~~l~~~~~~ADIVI~Av 212 (286)
T PRK14184 169 VGKPLALMLGAPGKFANATVTVCHS-RTPDLAEECREADFLFVAI 212 (286)
T ss_pred chHHHHHHHhCCcccCCCEEEEEeC-CchhHHHHHHhCCEEEEec
Confidence 1 224543 66666653 2222 2346789888643
No 224
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=31.12 E-value=4.7e+02 Score=28.61 Aligned_cols=167 Identities=13% Similarity=0.201 Sum_probs=88.2
Q ss_pred CHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCC--hHHHHHHHHH
Q psy6866 600 TAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPA--VPDAIDACHK 677 (961)
Q Consensus 600 ~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~--~~~~I~~l~~ 677 (961)
..+.++++.+.++.+..+|.+. .+|.-.... .+-.. ++..++.|++
T Consensus 12 a~~i~~~lk~~i~~l~~~g~~p-~Laii~vg~-------------------------------d~as~~Yv~~k~k~~~~ 59 (285)
T PRK14189 12 SKQLRAEAAQRAAALTARGHQP-GLAVILVGD-------------------------------NPASQVYVRNKVKACED 59 (285)
T ss_pred HHHHHHHHHHHHHHHHhCCCCC-eEEEEEeCC-------------------------------CchHHHHHHHHHHHHHH
Confidence 4456677777777777777654 444332222 21111 3566888999
Q ss_pred cCCEEEEEc--CCC-HHHHHHHHHHcCCCCCCCCCceeEe------------------chhhccCCHHHHHHHHHhcCce
Q psy6866 678 AGIRVIMVT--GDH-PCTAKAIAIKCHILSETSSDDNVFT------------------GTDLRKITDEELKDILETNKEL 736 (961)
Q Consensus 678 agi~v~m~T--GD~-~~ta~~ia~~~gi~~~~~~~~~v~~------------------g~~~~~~~~~~~~~~~~~~~~~ 736 (961)
.||.+.++- .|. .......-++++-... -+.+++. -+|.+-++...+..+....+
T Consensus 60 ~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~--V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~-- 135 (285)
T PRK14189 60 NGFHSLKDRYPADLSEAELLARIDELNRDPK--IHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHVANAGALMTGQP-- 135 (285)
T ss_pred cCCEEEEEECCCCCCHHHHHHHHHHHcCCCC--CCeEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhhHhhCCCC--
Confidence 999866553 332 2333333333322111 1111111 12333344444444444332
Q ss_pred EEeecCHHHHHHHHHHHhh--cCCEEEEEcCCCC-C---HhhhhhCCeeEeecCCccH---hhhhccceEeecCC
Q psy6866 737 VFARTSPLQKLRIVELYQS--LDEIVAVTGDGVN-D---APALKKADIGIAMGITGSE---VSKQTADMILMDDN 802 (961)
Q Consensus 737 v~ar~~p~~K~~iv~~l~~--~g~~V~~vGDG~N-D---~~al~~AdvGIamg~~g~~---~a~~aad~vl~~~~ 802 (961)
.|.-|||..=.++++...- .|..|+++|-|.. = +.+|...+.-+.+-.+.+. ..-..||+++..-.
T Consensus 136 ~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~avG 210 (285)
T PRK14189 136 LFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAAVG 210 (285)
T ss_pred CCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEcCC
Confidence 5778898777777666542 4889999999865 2 3355554444443322332 23467899887543
No 225
>TIGR00559 pdxJ pyridoxine 5'-phosphate synthase. PdxJ is required in the biosynthesis of pyridoxine (vitamin B6), a precursor to the enzyme cofactor pyridoxal phosphate. ECOCYC describes the predicted reaction equation as 1-amino-propan-2-one-3-phosphate + deoxyxylulose-5-phosphate = pyridoxine-5'-phosphate. The product of that reaction is oxidized by PdxH to pyridoxal 5'-phosphate.
Probab=31.12 E-value=2.6e+02 Score=29.57 Aligned_cols=38 Identities=18% Similarity=0.135 Sum_probs=31.6
Q ss_pred CChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy6866 666 PAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILS 704 (961)
Q Consensus 666 ~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~ 704 (961)
+..+++|++|+++||+|-++ =|........|+++|-..
T Consensus 110 ~~l~~~i~~l~~~gI~VSLF-iDP~~~qi~~A~~~GAd~ 147 (237)
T TIGR00559 110 DKLCELVKRFHAAGIEVSLF-IDADKDQISAAAEVGADR 147 (237)
T ss_pred HHHHHHHHHHHHCCCEEEEE-eCCCHHHHHHHHHhCcCE
Confidence 45788999999999999888 566677888899999743
No 226
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=31.05 E-value=25 Score=35.41 Aligned_cols=13 Identities=38% Similarity=0.491 Sum_probs=12.0
Q ss_pred EEecCcCccccCc
Q psy6866 445 ICTDKTGTLTQNK 457 (961)
Q Consensus 445 i~~DKTGTLT~n~ 457 (961)
+|||.+||||.+.
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 6999999999887
No 227
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=30.38 E-value=1.5e+02 Score=32.57 Aligned_cols=137 Identities=15% Similarity=0.217 Sum_probs=76.9
Q ss_pred cCCCCCChHHHHHHHHHcCCE---EEEEcCCCHHHH------HHHHHHcCCCCCCCC-----------------------
Q psy6866 661 YDPPRPAVPDAIDACHKAGIR---VIMVTGDHPCTA------KAIAIKCHILSETSS----------------------- 708 (961)
Q Consensus 661 ~D~lr~~~~~~I~~l~~agi~---v~m~TGD~~~ta------~~ia~~~gi~~~~~~----------------------- 708 (961)
.+.+|++.++.++.+++.|++ .++.-||++... ...|+++||......
T Consensus 11 A~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V 90 (297)
T PRK14167 11 AAQIRDDLTDAIETLEDAGVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYDTIDELNADEDV 90 (297)
T ss_pred HHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCC
Confidence 346777888888888888874 356668876544 345677887432100
Q ss_pred CceeEe------------------chhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhh--cCCEEEEEcCCCC
Q psy6866 709 DDNVFT------------------GTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQS--LDEIVAVTGDGVN 768 (961)
Q Consensus 709 ~~~v~~------------------g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~--~g~~V~~vGDG~N 768 (961)
+.+++. -+|++-++...+..+....+ -|.-|||..=.++++.++- .|..|+++|-+..
T Consensus 91 ~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~--~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~i 168 (297)
T PRK14167 91 HGILVQMPVPDHVDDREVLRRIDPAKDVDGFHPENVGRLVAGDA--RFKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDI 168 (297)
T ss_pred CEEEEcCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhCCCC--CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcc
Confidence 011111 11112222333333333222 4677888877777776643 5889999999854
Q ss_pred C----Hhhhhh------CCeeEeecCCccH---hhhhccceEeecC
Q psy6866 769 D----APALKK------ADIGIAMGITGSE---VSKQTADMILMDD 801 (961)
Q Consensus 769 D----~~al~~------AdvGIamg~~g~~---~a~~aad~vl~~~ 801 (961)
= +-||.. |-|-++= +.+. ..-..||+++..-
T Consensus 169 VGkPla~lL~~~~~~~~aTVtvch--s~T~~l~~~~~~ADIvIsAv 212 (297)
T PRK14167 169 VGKPMANLLIQKADGGNATVTVCH--SRTDDLAAKTRRADIVVAAA 212 (297)
T ss_pred cHHHHHHHHhcCccCCCCEEEEeC--CCCCCHHHHHhhCCEEEEcc
Confidence 1 224543 4455543 3332 2346789998743
No 228
>PRK05265 pyridoxine 5'-phosphate synthase; Provisional
Probab=30.13 E-value=1.4e+02 Score=31.47 Aligned_cols=38 Identities=24% Similarity=0.170 Sum_probs=32.1
Q ss_pred CChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy6866 666 PAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILS 704 (961)
Q Consensus 666 ~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~ 704 (961)
+..+++|++|+++||+|-++= |........|+++|-..
T Consensus 113 ~~l~~~i~~L~~~gIrVSLFi-dP~~~qi~~A~~~GAd~ 150 (239)
T PRK05265 113 DKLKPAIARLKDAGIRVSLFI-DPDPEQIEAAAEVGADR 150 (239)
T ss_pred HHHHHHHHHHHHCCCEEEEEe-CCCHHHHHHHHHhCcCE
Confidence 456889999999999988776 78888889999999743
No 229
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=29.98 E-value=43 Score=22.66 Aligned_cols=15 Identities=53% Similarity=0.716 Sum_probs=12.8
Q ss_pred CCCCCHHHHHHHHHh
Q psy6866 132 DRGLSELEVKRRLEK 146 (961)
Q Consensus 132 ~~GLs~~~~~~r~~~ 146 (961)
+.|||.+++++|++.
T Consensus 13 eh~ls~ee~~~RL~~ 27 (28)
T PF12368_consen 13 EHGLSEEEVAERLAA 27 (28)
T ss_pred hcCCCHHHHHHHHHc
Confidence 479999999999874
No 230
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.40 E-value=1.6e+02 Score=32.12 Aligned_cols=64 Identities=17% Similarity=0.254 Sum_probs=39.9
Q ss_pred EEeecCHHHHHHHHHHHhh--cCCEEEEEcCCCC----CHhhhhh--CCeeEeecCCccHh--hhhccceEeecC
Q psy6866 737 VFARTSPLQKLRIVELYQS--LDEIVAVTGDGVN----DAPALKK--ADIGIAMGITGSEV--SKQTADMILMDD 801 (961)
Q Consensus 737 v~ar~~p~~K~~iv~~l~~--~g~~V~~vGDG~N----D~~al~~--AdvGIamg~~g~~~--a~~aad~vl~~~ 801 (961)
-|.-|||..=.++++..+- .|..|+++|.|.. =+.+|.. |.|-++-. ...+. .-..||+++..-
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs-~t~~l~~~~~~ADIvV~Av 208 (285)
T PRK14191 135 GFVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHI-LTKDLSFYTQNADIVCVGV 208 (285)
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeC-CcHHHHHHHHhCCEEEEec
Confidence 4678899877777776643 4899999999832 1224433 55555433 22222 346789888654
No 231
>PLN02591 tryptophan synthase
Probab=29.33 E-value=3.2e+02 Score=29.30 Aligned_cols=33 Identities=9% Similarity=0.152 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCC---CHhhhhh
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVN---DAPALKK 775 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~N---D~~al~~ 775 (961)
|.+-.+.++.+++....-.++|-|++ |+..+..
T Consensus 174 ~~~~~~~i~~vk~~~~~Pv~vGFGI~~~e~v~~~~~ 209 (250)
T PLN02591 174 SGRVESLLQELKEVTDKPVAVGFGISKPEHAKQIAG 209 (250)
T ss_pred chhHHHHHHHHHhcCCCceEEeCCCCCHHHHHHHHh
Confidence 55556777888776566667799998 4555444
No 232
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=28.99 E-value=55 Score=29.46 Aligned_cols=29 Identities=31% Similarity=0.415 Sum_probs=23.4
Q ss_pred EEEECCeEEEEECCCcccceEEEecCCCee
Q psy6866 242 TVIRNGSVKEIDSAGLVRGDIVLLKIGDKV 271 (961)
Q Consensus 242 ~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~I 271 (961)
+|.-||+.. -++.++.+||+|.|.-|...
T Consensus 35 rV~vNG~~a-KpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 35 RVKVNGQRA-KPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred eEEECCEEc-ccccccCCCCEEEEEeCCcE
Confidence 455588766 79999999999999988643
No 233
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=28.46 E-value=60 Score=34.29 Aligned_cols=63 Identities=25% Similarity=0.228 Sum_probs=32.3
Q ss_pred EEeecCHHHHHHHHHHHhhcC-------CEEEEEcCCCCCHhhhhhC------CeeEeecCCccH-hhhhccceEeec
Q psy6866 737 VFARTSPLQKLRIVELYQSLD-------EIVAVTGDGVNDAPALKKA------DIGIAMGITGSE-VSKQTADMILMD 800 (961)
Q Consensus 737 v~ar~~p~~K~~iv~~l~~~g-------~~V~~vGDG~ND~~al~~A------dvGIamg~~g~~-~a~~aad~vl~~ 800 (961)
+=.|..-..|...|+.+.+.. ..++++||...|-.|++.. +++|.+| ..+. .-.-+|++-+.+
T Consensus 157 vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~-~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 157 VEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVG-SVSVGEKPTAASYRLDD 233 (235)
T ss_dssp EEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES------------------
T ss_pred EEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEE-eeccccccccccccccc
Confidence 445555566999999886642 3688899999999998762 6788887 4332 223456665554
No 234
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=28.39 E-value=1.5e+02 Score=32.50 Aligned_cols=38 Identities=16% Similarity=0.194 Sum_probs=27.3
Q ss_pred CChHHHHHHHHHcCCEEEEEcCCCHHHHHH-HHHHcCCC
Q psy6866 666 PAVPDAIDACHKAGIRVIMVTGDHPCTAKA-IAIKCHIL 703 (961)
Q Consensus 666 ~~~~~~I~~l~~agi~v~m~TGD~~~ta~~-ia~~~gi~ 703 (961)
+++...-+.|++.|.+++++|.+....+.. ..+.++..
T Consensus 63 ~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~~ 101 (291)
T PF14336_consen 63 PGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGLQ 101 (291)
T ss_pred HHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhhC
Confidence 456667788899999999999887655543 44555553
No 235
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=27.70 E-value=98 Score=30.50 Aligned_cols=42 Identities=19% Similarity=0.093 Sum_probs=37.5
Q ss_pred CCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy6866 662 DPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILS 704 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~ 704 (961)
=.+||++.+.++.|++. +++.++|.-....|..+.+.++...
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~ 98 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDG 98 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCC
Confidence 36899999999999955 9999999999999999999988753
No 236
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=27.42 E-value=4.2e+02 Score=31.53 Aligned_cols=148 Identities=22% Similarity=0.187 Sum_probs=81.9
Q ss_pred ECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeee
Q psy6866 245 RNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSG 324 (961)
Q Consensus 245 R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G 324 (961)
+-|....+...|.+|-|.+.+.. ..=+|--.|.|++.-+.-. .|+.. ..|. .++.|+....-
T Consensus 53 ~~GDiv~v~~G~~iP~Dg~vl~g--~~~vdes~LTGEs~pv~k~--~g~~v----~~gs----------~~~~G~~~~~v 114 (499)
T TIGR01494 53 VPGDIVLVKSGEIVPADGVLLSG--SCFVDESNLTGESVPVLKT--AGDAV----FAGT----------YVFNGTLIVVV 114 (499)
T ss_pred CCCCEEEECCCCEeeeeEEEEEc--cEEEEcccccCCCCCeeec--cCCcc----ccCc----------EEeccEEEEEE
Confidence 45889999999999999999866 4555655666665433321 24322 1222 24556544321
Q ss_pred c---------eEEEEEEcCCcChhhhHHhhhccccCCCCchHHHH-HHHHHHHHHHHHHHHHHHHHHHHH---hhccHHH
Q psy6866 325 S---------GKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEV-QHFMRLISMWALTLGAICFLLALY---IGYNWLN 391 (961)
Q Consensus 325 ~---------~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~-~~~~~~l~~i~~~~~~i~~i~~~~---~~~~~~~ 391 (961)
. ..+.++++|.+|.. .+. ....+.. ..+...+..+++++.++.+..... +...+..
T Consensus 115 ~~~~~~s~~~~i~~~v~~~~~~k~-~~~----------~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~ 183 (499)
T TIGR01494 115 SATGPNTFGGKIAVVVYTGFETKT-PLQ----------PKLDRLSDIIFILFVLLIALAVFLFWAIGLWDPNSIFKIFLR 183 (499)
T ss_pred EEeccccHHHHHHHHHHhcCCCCC-chH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHH
Confidence 1 23345567776521 111 1122222 455555444444443333322111 2334556
Q ss_pred HHHHHHHhhhhccCchhHHHHHHHHHHHHH
Q psy6866 392 ACVYVIGIIVANVPEGLLATLTVSLTLTAK 421 (961)
Q Consensus 392 ~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~ 421 (961)
.+...+...=.++|.++|++...+.....+
T Consensus 184 ~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~ 213 (499)
T TIGR01494 184 ALILLVIAIPIALPLAVTIALAVGDARLAK 213 (499)
T ss_pred HHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Confidence 677777777888899998888888766553
No 237
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=27.02 E-value=2.4e+02 Score=24.12 Aligned_cols=19 Identities=11% Similarity=0.277 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy6866 357 EQEVQHFMRLISMWALTLG 375 (961)
Q Consensus 357 ~~~~~~~~~~l~~i~~~~~ 375 (961)
|+..+++...+..+..+++
T Consensus 6 Q~~ae~l~~~il~~~~iis 24 (76)
T PF06645_consen 6 QRLAEKLMQYILIISAIIS 24 (76)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4556666665544444333
No 238
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=26.73 E-value=2.4e+02 Score=31.68 Aligned_cols=142 Identities=12% Similarity=0.146 Sum_probs=78.0
Q ss_pred ecCCCCCChHHHHHHHHHc-CCE---EEEEcCCCHHHH------HHHHHHcCCCCCCC------C---------------
Q psy6866 660 LYDPPRPAVPDAIDACHKA-GIR---VIMVTGDHPCTA------KAIAIKCHILSETS------S--------------- 708 (961)
Q Consensus 660 ~~D~lr~~~~~~I~~l~~a-gi~---v~m~TGD~~~ta------~~ia~~~gi~~~~~------~--------------- 708 (961)
+.+.++.+.++.++.+++. |++ .+++-||++... ...|+++||..... .
T Consensus 64 vA~~i~~~lk~~v~~l~~~~g~~P~LaiIlvGddpaS~~Yv~~k~K~a~~~GI~~~~~~l~~~~te~ell~~I~~lN~D~ 143 (345)
T PLN02897 64 IAEEIRTKIASEVRKMKKAVGKVPGLAVVLVGQQRDSQTYVRNKIKACEETGIKSLLAELPEDCTEGQILSALRKFNEDT 143 (345)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChHHHHHHHHHHHHHHhcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 4567788888888888876 654 446678776654 33567788743110 0
Q ss_pred --CceeEe------------------chhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhh--cCCEEEEEcCC
Q psy6866 709 --DDNVFT------------------GTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQS--LDEIVAVTGDG 766 (961)
Q Consensus 709 --~~~v~~------------------g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~--~g~~V~~vGDG 766 (961)
+.+++. .+|.+-++...+..+.......-|.-|+|..=.++++...- .|+.|+++|-+
T Consensus 144 ~V~GIlVQlPLP~hid~~~i~~~I~p~KDVDGl~p~N~G~L~~~~~~~~~~PCTp~avi~LL~~~~i~l~GK~vvVIGRS 223 (345)
T PLN02897 144 SIHGILVQLPLPQHLDESKILNMVRLEKDVDGFHPLNVGNLAMRGREPLFVSCTPKGCVELLIRSGVEIAGKNAVVIGRS 223 (345)
T ss_pred CCCEEEEeCCCCCCCCHHHHHhccCcccCccCCCHHHHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCC
Confidence 011111 11222233334444433211124778888777777666542 48899999998
Q ss_pred CC----CHhhhhhCCeeEeecCCccH---hhhhccceEeecC
Q psy6866 767 VN----DAPALKKADIGIAMGITGSE---VSKQTADMILMDD 801 (961)
Q Consensus 767 ~N----D~~al~~AdvGIamg~~g~~---~a~~aad~vl~~~ 801 (961)
.. =+.+|...|.-+.+-.+-+. ..-..||+++..-
T Consensus 224 ~iVGkPla~LL~~~~ATVTicHs~T~nl~~~~~~ADIvIsAv 265 (345)
T PLN02897 224 NIVGLPMSLLLQRHDATVSTVHAFTKDPEQITRKADIVIAAA 265 (345)
T ss_pred ccccHHHHHHHHHCCCEEEEEcCCCCCHHHHHhhCCEEEEcc
Confidence 53 12355554444443322222 2345689888644
No 239
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=26.50 E-value=1.1e+03 Score=30.39 Aligned_cols=82 Identities=17% Similarity=0.224 Sum_probs=48.9
Q ss_pred chhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCC-----CeeEE-----EECCeEEEEECCCcccceEEEecCCC
Q psy6866 200 DNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIP-----TRATV-----IRNGSVKEIDSAGLVRGDIVLLKIGD 269 (961)
Q Consensus 200 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-----~~~~V-----~R~G~~~~I~~~eLv~GDIV~l~~Gd 269 (961)
+...+.+++++..+++.+-++..++ .-+.+.++..... .+... +.-|....+...|.+|-|.+.++..
T Consensus 38 ~~~~Il~vi~~~~~i~~~qe~~a~~-~~~~L~~~~~~~~~ViRdg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~- 115 (917)
T TIGR01116 38 EPFVILLILVANAIVGVWQERNAEK-AIEALKEYESEHAKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLK- 115 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhccCCCceEEEECCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEec-
Confidence 3445555566666666666655554 4444554543321 12222 2458899999999999999999765
Q ss_pred eeeccEEEEeeCCc
Q psy6866 270 KVPADIRLIEIQDL 283 (961)
Q Consensus 270 ~IPaD~ill~g~~l 283 (961)
.+=+|=-.|.|++.
T Consensus 116 ~l~VdeS~LTGES~ 129 (917)
T TIGR01116 116 TLRVDQSILTGESV 129 (917)
T ss_pred ceEEEcccccCCCC
Confidence 23355555555553
No 240
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=26.29 E-value=1.1e+02 Score=30.64 Aligned_cols=41 Identities=20% Similarity=0.349 Sum_probs=31.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEc-CCCHHHHHHHHHHcCCC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVT-GDHPCTAKAIAIKCHIL 703 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~T-GD~~~ta~~ia~~~gi~ 703 (961)
.+-|+++++++.|++.|+++.+.| -+.+..|+.+-+.+++.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 577999999999999999999999 58899999999999997
No 241
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.26 E-value=2.2e+02 Score=31.32 Aligned_cols=137 Identities=18% Similarity=0.225 Sum_probs=74.8
Q ss_pred cCCCCCChHHHHHHHHHc-CCE---EEEEcCCCHHHH------HHHHHHcCCCCCC------CC----------------
Q psy6866 661 YDPPRPAVPDAIDACHKA-GIR---VIMVTGDHPCTA------KAIAIKCHILSET------SS---------------- 708 (961)
Q Consensus 661 ~D~lr~~~~~~I~~l~~a-gi~---v~m~TGD~~~ta------~~ia~~~gi~~~~------~~---------------- 708 (961)
.+.+|++.++.++.+++. |++ ..+.-||++... ...|+++||.... ..
T Consensus 11 A~~i~~~lk~~v~~l~~~~g~~p~LaiI~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 90 (297)
T PRK14186 11 AAEIEQRLQAQIESNLPKAGRPPGLAVLRVGDDPASAVYVRNKEKACARVGIASFGKHLPADTSQAEVEALIAQLNQDER 90 (297)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 345677788888888765 664 356668776544 3356777874310 00
Q ss_pred -CceeEe------------------chhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhh--cCCEEEEEcCCC
Q psy6866 709 -DDNVFT------------------GTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQS--LDEIVAVTGDGV 767 (961)
Q Consensus 709 -~~~v~~------------------g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~--~g~~V~~vGDG~ 767 (961)
+.+++. -+|.+-++...+.++..... -|.-|||..=.++++.+.- .|..|+++|-+.
T Consensus 91 V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~--~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~ 168 (297)
T PRK14186 91 VDGILLQLPLPKHLDEVPLLHAIDPDKDADGLHPLNLGRLVKGEP--GLRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSI 168 (297)
T ss_pred CCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCCCC--CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCc
Confidence 011111 11122233333444433322 3677888877777776642 488999999985
Q ss_pred CC----Hhhhhh--CCeeEeecCCccH---hhhhccceEeecC
Q psy6866 768 ND----APALKK--ADIGIAMGITGSE---VSKQTADMILMDD 801 (961)
Q Consensus 768 ND----~~al~~--AdvGIamg~~g~~---~a~~aad~vl~~~ 801 (961)
.= +.||.. |-|-++-. .+. ..-..||+++..-
T Consensus 169 iVGkPla~lL~~~~atVtv~hs--~T~~l~~~~~~ADIvIsAv 209 (297)
T PRK14186 169 LVGKPLALMLLAANATVTIAHS--RTQDLASITREADILVAAA 209 (297)
T ss_pred cchHHHHHHHHHCCCEEEEeCC--CCCCHHHHHhhCCEEEEcc
Confidence 31 224543 44544432 222 2345689988643
No 242
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=26.23 E-value=64 Score=34.22 Aligned_cols=94 Identities=9% Similarity=0.096 Sum_probs=51.5
Q ss_pred CCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHH--hcCceEEeecC
Q psy6866 665 RPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILE--TNKELVFARTS 742 (961)
Q Consensus 665 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~--~~~~~v~ar~~ 742 (961)
-++..++++.|++.|++. ++|......+.......|. | .+...+. -.+......-+
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~------------g---------~~~~~i~~~g~~~~~~gKP~ 197 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGA------------G---------YYAELIKQLGGKVIYSGKPY 197 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecc------------c---------HHHHHHHHhCCcEecCCCCC
Confidence 367888999998899987 6676554433222111111 0 1111110 01111234444
Q ss_pred HHHHHHHHHHHhhc-CCEEEEEcCC-CCCHhhhhhCCeeE
Q psy6866 743 PLQKLRIVELYQSL-DEIVAVTGDG-VNDAPALKKADIGI 780 (961)
Q Consensus 743 p~~K~~iv~~l~~~-g~~V~~vGDG-~ND~~al~~AdvGI 780 (961)
|+-=..+.+.+... .+.++|+||. .+|..+=+.|++-.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 198 PAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred HHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 44334444555322 3468999999 59999988887654
No 243
>PLN02151 trehalose-phosphatase
Probab=25.92 E-value=1.3e+02 Score=34.06 Aligned_cols=63 Identities=17% Similarity=0.192 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHhhc----C---CEEEEEcCCCCCHhhhhhC-----CeeEeecCCccHhhhhccceEeecCCchHHHHHH
Q psy6866 743 PLQKLRIVELYQSL----D---EIVAVTGDGVNDAPALKKA-----DIGIAMGITGSEVSKQTADMILMDDNFASIVLGI 810 (961)
Q Consensus 743 p~~K~~iv~~l~~~----g---~~V~~vGDG~ND~~al~~A-----dvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i 810 (961)
..+|...|+.+.+. + ..+.++||-..|-.||+.. ++||.+| .+.. .-.|++.|.+ .+.+...+
T Consensus 267 ~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg-~~~k--~T~A~y~L~d--p~eV~~~L 341 (354)
T PLN02151 267 KWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVS-KYAK--ETNASYSLQE--PDEVMEFL 341 (354)
T ss_pred CCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEec-cCCC--CCcceEeCCC--HHHHHHHH
Confidence 34899999988754 1 2478999999999999853 6777776 2221 2257787764 34444333
No 244
>TIGR00381 cdhD CO dehydrogenase/acetyl-CoA synthase, delta subunit. This is the small subunit of a heterodimer which catalyzes the reaction CO + H2O + Acceptor = CO2 + Reduced acceptor and is involved in the synthesis of acetyl-CoA from CO2 and H2.
Probab=25.50 E-value=5.3e+02 Score=29.43 Aligned_cols=134 Identities=12% Similarity=0.140 Sum_probs=73.8
Q ss_pred HHHHHHHcCCEEEEEcCCCH-------H---HHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCc--eEE
Q psy6866 671 AIDACHKAGIRVIMVTGDHP-------C---TAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKE--LVF 738 (961)
Q Consensus 671 ~I~~l~~agi~v~m~TGD~~-------~---ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~--~v~ 738 (961)
.++.++.-.|.+...|||.. . +++.++..+++ .+++.|..-...+.+-+...++.++. .+.
T Consensus 148 ~V~~~~aD~Ialr~~S~DP~~~d~~~~e~a~~vk~V~~av~v-------PLIL~gsg~~~kD~eVLeaaLe~~~G~kpLL 220 (389)
T TIGR00381 148 CVKEFGADMVTIHLISTDPKLDDKSPSEAAKVLEDVLQAVDV-------PIVIGGSGNPEKDPLVLEKAAEVAEGERCLL 220 (389)
T ss_pred HHHHhCCCEEEEEecCCCccccccCHHHHHHHHHHHHHhCCC-------CEEEeCCCCCcCCHHHHHHHHHHhCCCCcEE
Confidence 34455555567778888865 2 33444444554 45777664445555555555555433 366
Q ss_pred eecCHH-HHHHHHHHHhhcCCEEEEEc-CCCCCHhhhhhCCeeE-eecCCccHhhhhccceEeecCCchHHHHHHHHHHH
Q psy6866 739 ARTSPL-QKLRIVELYQSLDEIVAVTG-DGVNDAPALKKADIGI-AMGITGSEVSKQTADMILMDDNFASIVLGIEEGRL 815 (961)
Q Consensus 739 ar~~p~-~K~~iv~~l~~~g~~V~~vG-DG~ND~~al~~AdvGI-amg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~ 815 (961)
...+.+ .=.++.+..++.|+.|.+-+ |..|.+--| +.=+ .+|. ..-|+|+ |..-..+-..++.+-.
T Consensus 221 ~SAt~e~Ny~~ia~lAk~yg~~Vvv~s~~Din~ak~L---n~kL~~~Gv-------~~eDIVl-DP~t~alG~Gieya~s 289 (389)
T TIGR00381 221 ASANLDLDYEKIANAAKKYGHVVLSWTIMDINMQKTL---NRYLLKRGL-------MPRDIVM-DPTTCALGYGIEFSIT 289 (389)
T ss_pred EecCchhhHHHHHHHHHHhCCeEEEEcCCcHHHHHHH---HHHHHHcCC-------CHHHEEE-cCCCccccCCHHHHHH
Confidence 667766 55667777788888665544 655544433 2222 1221 1225444 4444344455555666
Q ss_pred HHHHHHH
Q psy6866 816 IFDNLKK 822 (961)
Q Consensus 816 ~~~ni~~ 822 (961)
.+.+||.
T Consensus 290 ~~erIRr 296 (389)
T TIGR00381 290 NMERIRL 296 (389)
T ss_pred HHHHHHH
Confidence 6667765
No 245
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.78 E-value=2.3e+02 Score=31.17 Aligned_cols=65 Identities=12% Similarity=0.042 Sum_probs=37.6
Q ss_pred EEeecCHHHHHHHHHHHh--hcCCEEEEEcCCCC----CHhhhhhCCeeEeecCCccH---hhhhccceEeecC
Q psy6866 737 VFARTSPLQKLRIVELYQ--SLDEIVAVTGDGVN----DAPALKKADIGIAMGITGSE---VSKQTADMILMDD 801 (961)
Q Consensus 737 v~ar~~p~~K~~iv~~l~--~~g~~V~~vGDG~N----D~~al~~AdvGIamg~~g~~---~a~~aad~vl~~~ 801 (961)
-|.-|||..=.++++... -.|..|+++|-+.. =+.+|...|--+.+-.+-|. ..-..||+++..-
T Consensus 138 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~~~~~ADIvVsAv 211 (294)
T PRK14187 138 CLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLADYCSKADILVAAV 211 (294)
T ss_pred CccCcCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHHHHhhCCEEEEcc
Confidence 477889987767766654 24888999998853 12245444433333222222 1235678887643
No 246
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=24.56 E-value=1.4e+02 Score=31.58 Aligned_cols=47 Identities=17% Similarity=0.244 Sum_probs=33.8
Q ss_pred eeeeecCCCCCChHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHH-cCC
Q psy6866 656 GLISLYDPPRPAVPDAIDACHKAGIRVIMVT---GDHPCTAKAIAIK-CHI 702 (961)
Q Consensus 656 G~i~~~D~lr~~~~~~I~~l~~agi~v~m~T---GD~~~ta~~ia~~-~gi 702 (961)
|++.-.+.+=+++.++|+.++++|++++++| |.........-.+ .|+
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~ 57 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGV 57 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 4444456667799999999999999999999 5555544443333 666
No 247
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=24.02 E-value=1.7e+02 Score=24.53 Aligned_cols=32 Identities=28% Similarity=0.289 Sum_probs=24.1
Q ss_pred CeeEEEECCeEEEEEC---CCcccceEEEecCCCe
Q psy6866 239 TRATVIRNGSVKEIDS---AGLVRGDIVLLKIGDK 270 (961)
Q Consensus 239 ~~~~V~R~G~~~~I~~---~eLv~GDIV~l~~Gd~ 270 (961)
..++|-.+|..++|+. .++.|||.|.+..|--
T Consensus 17 ~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~A 51 (68)
T PF01455_consen 17 GMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGFA 51 (68)
T ss_dssp TEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTEE
T ss_pred CEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecChh
Confidence 5678888999998875 4588999999999843
No 248
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=24.00 E-value=6.6e+02 Score=27.67 Aligned_cols=33 Identities=15% Similarity=0.169 Sum_probs=24.9
Q ss_pred ChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy6866 667 AVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHIL 703 (961)
Q Consensus 667 ~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~ 703 (961)
|+..++.+. +..+|+-|....+...+|+..++.
T Consensus 91 DTArVLsr~----~D~I~~R~~~~~~ve~lA~~s~VP 123 (310)
T COG0078 91 DTARVLSRM----VDAIMIRGFSHETLEELAKYSGVP 123 (310)
T ss_pred HHHHHHHhh----hheEEEecccHHHHHHHHHhCCCc
Confidence 344444444 567899999999999999998874
No 249
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=23.74 E-value=1.5e+02 Score=30.82 Aligned_cols=23 Identities=26% Similarity=0.473 Sum_probs=15.0
Q ss_pred CCeEEEEECCCcccceEEEecCC
Q psy6866 246 NGSVKEIDSAGLVRGDIVLLKIG 268 (961)
Q Consensus 246 ~G~~~~I~~~eLv~GDIV~l~~G 268 (961)
-|....+...|.+|.|.+.++.|
T Consensus 54 ~GDiI~l~~g~~vPaD~~ll~~g 76 (230)
T PF00122_consen 54 PGDIIILKAGDIVPADGILLESG 76 (230)
T ss_dssp TTSEEEEETTEBESSEEEEEESS
T ss_pred ceeeeecccccccccCccceecc
Confidence 46666666677777777666633
No 250
>PRK04980 hypothetical protein; Provisional
Probab=23.64 E-value=90 Score=28.37 Aligned_cols=55 Identities=13% Similarity=0.234 Sum_probs=37.0
Q ss_pred eeEEEECCeEEEEECCCcccceEEEec--CCCeeeccEEEEeeCCcee-----eccCccccccceec
Q psy6866 240 RATVIRNGSVKEIDSAGLVRGDIVLLK--IGDKVPADIRLIEIQDLKA-----ENSSLTGEVEPVTC 299 (961)
Q Consensus 240 ~~~V~R~G~~~~I~~~eLv~GDIV~l~--~Gd~IPaD~ill~g~~l~v-----deS~LTGEs~pv~k 299 (961)
+.--+||+ .....+|||++.|. .+.+.-|+..+++-..... +.+...|+|.+--|
T Consensus 20 KTiTiRd~-----se~~~~~G~~~~V~~~e~g~~~c~ieI~sV~~i~f~eLte~hA~qEg~sL~elk 81 (102)
T PRK04980 20 KTITIRDE-----SESHFKPGDVLRVGTFEDDRYFCTIEVLSVSPVTFDELNEKHAEQENMTLPELK 81 (102)
T ss_pred ceEEeeCC-----cccCCCCCCEEEEEECCCCcEEEEEEEEEEEEEehhhCCHHHHHHhCCCHHHHH
Confidence 34445665 24569999999996 7889999999987554333 33555666655444
No 251
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=23.39 E-value=4.2e+02 Score=21.80 Aligned_cols=25 Identities=16% Similarity=0.250 Sum_probs=16.8
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHH
Q psy6866 161 VYVLVGYIFRGFSALLWFGALLSFL 185 (961)
Q Consensus 161 ~~~~~~~l~~~~~~~l~~~ails~~ 185 (961)
++.+++.+|+.+-+++++++++++.
T Consensus 3 fK~~fk~iW~~~DIi~Fila~i~i~ 27 (63)
T PF06341_consen 3 FKKFFKTIWKYFDIILFILAMIFIN 27 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4557777777777777777666543
No 252
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.44 E-value=2.5e+02 Score=30.69 Aligned_cols=139 Identities=17% Similarity=0.272 Sum_probs=74.2
Q ss_pred cCCCCCChHHHHHHHHHcCCEE---EEEcCCCHHHH------HHHHHHcCCCCCCC------C-----------------
Q psy6866 661 YDPPRPAVPDAIDACHKAGIRV---IMVTGDHPCTA------KAIAIKCHILSETS------S----------------- 708 (961)
Q Consensus 661 ~D~lr~~~~~~I~~l~~agi~v---~m~TGD~~~ta------~~ia~~~gi~~~~~------~----------------- 708 (961)
.+.++++.++.++.+++.|++. ++.-||++... ...|+++|+..... .
T Consensus 12 a~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V 91 (284)
T PRK14193 12 ADEIKADLAERVAALKEKGITPGLGTVLVGDDPGSQAYVRGKHRDCAEVGITSIRRDLPADATQEELNAVIDELNADPAC 91 (284)
T ss_pred HHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCC
Confidence 3456777788888888777653 44567776533 34567778743110 0
Q ss_pred CceeEe------------------chhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhh--cCCEEEEEcCCCC
Q psy6866 709 DDNVFT------------------GTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQS--LDEIVAVTGDGVN 768 (961)
Q Consensus 709 ~~~v~~------------------g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~--~g~~V~~vGDG~N 768 (961)
+.+++. .+|.+-++...+..+....+ -|.-|||..=.++++...- .|..|+++|-+..
T Consensus 92 ~GIlvqlPlP~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~--~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~~ 169 (284)
T PRK14193 92 TGYIVQLPLPKHLDENAVLERIDPAKDADGLHPTNLGRLVLNEP--APLPCTPRGIVHLLRRYDVELAGAHVVVIGRGVT 169 (284)
T ss_pred CEEEEeCCCCCCCCHHHHHhcCCcccCccCCChhhhhHHhCCCC--CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCc
Confidence 011111 11112222233333333322 3568888877777776643 4889999999854
Q ss_pred C----Hhhhhh--CCeeEeecCCccH---hhhhccceEeecC
Q psy6866 769 D----APALKK--ADIGIAMGITGSE---VSKQTADMILMDD 801 (961)
Q Consensus 769 D----~~al~~--AdvGIamg~~g~~---~a~~aad~vl~~~ 801 (961)
= +.||.. .+..+.+..+.+. ..-..||+++..-
T Consensus 170 VGkPla~lL~~~~~~atVtvchs~T~~l~~~~k~ADIvV~Av 211 (284)
T PRK14193 170 VGRPIGLLLTRRSENATVTLCHTGTRDLAAHTRRADIIVAAA 211 (284)
T ss_pred chHHHHHHHhhccCCCEEEEeCCCCCCHHHHHHhCCEEEEec
Confidence 1 224543 3433333323332 2245689888643
No 253
>KOG3085|consensus
Probab=22.22 E-value=2.8e+02 Score=29.45 Aligned_cols=91 Identities=11% Similarity=0.089 Sum_probs=51.2
Q ss_pred CChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHH
Q psy6866 666 PAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQ 745 (961)
Q Consensus 666 ~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~ 745 (961)
++..+++++||++|..+.++|-=.... ..+-..+|+.. .++.++..+. .=.-.-.|.=
T Consensus 116 ~~~~~~lq~lR~~g~~l~iisN~d~r~-~~~l~~~~l~~--------------------~fD~vv~S~e-~g~~KPDp~I 173 (237)
T KOG3085|consen 116 DGMQELLQKLRKKGTILGIISNFDDRL-RLLLLPLGLSA--------------------YFDFVVESCE-VGLEKPDPRI 173 (237)
T ss_pred cHHHHHHHHHHhCCeEEEEecCCcHHH-HHHhhccCHHH--------------------hhhhhhhhhh-hccCCCChHH
Confidence 445699999999998888887433322 25555666632 1222222211 0111222322
Q ss_pred HHHHHHHHhhcCCEEEEEcCC-CCCHhhhhhCCe
Q psy6866 746 KLRIVELYQSLDEIVAVTGDG-VNDAPALKKADI 778 (961)
Q Consensus 746 K~~iv~~l~~~g~~V~~vGDG-~ND~~al~~Adv 778 (961)
=...++.+.-+-+.++++||. .||...-+.++.
T Consensus 174 f~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~ 207 (237)
T KOG3085|consen 174 FQLALERLGVKPEECVHIGDLLENDYEGARNLGW 207 (237)
T ss_pred HHHHHHHhCCChHHeEEecCccccccHhHHHcCC
Confidence 233444455455678899996 599988666654
No 254
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=21.76 E-value=4e+02 Score=28.27 Aligned_cols=84 Identities=13% Similarity=0.142 Sum_probs=53.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHH----HHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEE
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCT----AKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVF 738 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~t----a~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ 738 (961)
.+=||+.+.++...+.|..|..+|.+.... +..--++.|+...... ..+|
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~--------------------------~~ll 175 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLES--------------------------HLLL 175 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCccccccc--------------------------ceEE
Confidence 456899999999999999999999887665 3334456677542211 1122
Q ss_pred ee--cCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhh
Q psy6866 739 AR--TSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKK 775 (961)
Q Consensus 739 ar--~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~ 775 (961)
-+ .+-+...+.| ++--.+|+.+||..+|-.....
T Consensus 176 kk~~k~Ke~R~~~v---~k~~~iVm~vGDNl~DF~d~~~ 211 (274)
T COG2503 176 KKDKKSKEVRRQAV---EKDYKIVMLVGDNLDDFGDNAY 211 (274)
T ss_pred eeCCCcHHHHHHHH---hhccceeeEecCchhhhcchhh
Confidence 21 1223333333 3344689999999998775443
No 255
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=21.14 E-value=2e+02 Score=28.85 Aligned_cols=68 Identities=18% Similarity=0.170 Sum_probs=43.8
Q ss_pred EEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHH
Q psy6866 737 VFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLI 816 (961)
Q Consensus 737 v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~ 816 (961)
.+.=.++++=...++.+++.|..| ++|++.- +..-++. --..++...+..++..++.+++++
T Consensus 105 ~~~~~~~~e~~~~i~~~~~~G~~v-iVGg~~~-~~~A~~~----------------gl~~v~i~sg~esi~~Al~eA~~i 166 (176)
T PF06506_consen 105 IYPYDSEEEIEAAIKQAKAEGVDV-IVGGGVV-CRLARKL----------------GLPGVLIESGEESIRRALEEALRI 166 (176)
T ss_dssp EEEESSHHHHHHHHHHHHHTT--E-EEESHHH-HHHHHHT----------------TSEEEESS--HHHHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHHcCCcE-EECCHHH-HHHHHHc----------------CCcEEEEEecHHHHHHHHHHHHHH
Confidence 555667888888899998888555 5587631 1111221 223466666788999999999998
Q ss_pred HHHHHH
Q psy6866 817 FDNLKK 822 (961)
Q Consensus 817 ~~ni~~ 822 (961)
.+..++
T Consensus 167 ~~~~~~ 172 (176)
T PF06506_consen 167 ARARRR 172 (176)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887664
No 256
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=21.14 E-value=55 Score=25.88 Aligned_cols=12 Identities=50% Similarity=0.673 Sum_probs=10.1
Q ss_pred ccceEEEecCCC
Q psy6866 258 VRGDIVLLKIGD 269 (961)
Q Consensus 258 v~GDIV~l~~Gd 269 (961)
.+||+|.|+.|-
T Consensus 2 ~~GDvV~LKSGG 13 (53)
T PF09926_consen 2 KIGDVVQLKSGG 13 (53)
T ss_pred CCCCEEEEccCC
Confidence 589999999873
No 257
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=20.42 E-value=1.7e+02 Score=25.09 Aligned_cols=47 Identities=19% Similarity=0.131 Sum_probs=36.7
Q ss_pred eeeecCCCCCChHHHHHHHHHcCCEEEE-EcCCCHHHHHHHHHHcCCC
Q psy6866 657 LISLYDPPRPAVPDAIDACHKAGIRVIM-VTGDHPCTAKAIAIKCHIL 703 (961)
Q Consensus 657 ~i~~~D~lr~~~~~~I~~l~~agi~v~m-~TGD~~~ta~~ia~~~gi~ 703 (961)
++.+.+..++.+.+..+.|++.|+++.+ ..+.+...-..-|.+.|+.
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 3444566777888999999999999988 5677777777788888874
No 258
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.20 E-value=1.2e+02 Score=33.07 Aligned_cols=139 Identities=17% Similarity=0.225 Sum_probs=75.9
Q ss_pred ecCCCCCChHHHHHHHHHcCCE---EEEEcCCCHHHH------HHHHHHcCCCCCCCC----------------------
Q psy6866 660 LYDPPRPAVPDAIDACHKAGIR---VIMVTGDHPCTA------KAIAIKCHILSETSS---------------------- 708 (961)
Q Consensus 660 ~~D~lr~~~~~~I~~l~~agi~---v~m~TGD~~~ta------~~ia~~~gi~~~~~~---------------------- 708 (961)
+.+.++++.++.++.+++.|++ .+++-||++... ...|+++||......
T Consensus 11 ia~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~ 90 (286)
T PRK14175 11 IAKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMISEIVHLEETATEEEVLNELNRLNNDDS 90 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 3456778888888888887865 355678876654 345677887431100
Q ss_pred -CceeEec------------------hhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHh--hcCCEEEEEcCCC
Q psy6866 709 -DDNVFTG------------------TDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQ--SLDEIVAVTGDGV 767 (961)
Q Consensus 709 -~~~v~~g------------------~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~--~~g~~V~~vGDG~ 767 (961)
+.+++.- +|.+-++...+..+....+ -|.-|||..=.++++.+. -.|..|+++|-|.
T Consensus 91 V~GIivq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~--~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~ 168 (286)
T PRK14175 91 VSGILVQVPLPKQVSEQKILEAINPEKDVDGFHPINIGKLYIDEQ--TFVPCTPLGIMEILKHADIDLEGKNAVVIGRSH 168 (286)
T ss_pred CCEEEEeCCCCCCCCHHHHHhccCcccCcccCCccchHhHhcCCC--CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCc
Confidence 0111110 1111122222333333222 467888887777777664 2588999999985
Q ss_pred C----CHhhhhh--CCeeEeecCCccH--hhhhccceEeecC
Q psy6866 768 N----DAPALKK--ADIGIAMGITGSE--VSKQTADMILMDD 801 (961)
Q Consensus 768 N----D~~al~~--AdvGIamg~~g~~--~a~~aad~vl~~~ 801 (961)
. =+.+|.. |.|-++-. ...+ ..-..||+++..-
T Consensus 169 ~VG~pla~lL~~~gatVtv~~s-~t~~l~~~~~~ADIVIsAv 209 (286)
T PRK14175 169 IVGQPVSKLLLQKNASVTILHS-RSKDMASYLKDADVIVSAV 209 (286)
T ss_pred hhHHHHHHHHHHCCCeEEEEeC-CchhHHHHHhhCCEEEECC
Confidence 2 1224433 55555432 2222 2345678887654
Done!