RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy6866
(961 letters)
>d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha
chain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 214
Score = 160 bits (405), Expect = 2e-45
Identities = 72/212 (33%), Positives = 116/212 (54%), Gaps = 4/212 (1%)
Query: 458 MTVLHLSFNREIYHVKNGVDVDIQNFETNT-TYKTLVRAACLCSKAEFEPNQDNIPMRER 516
MTV H+ F+ +I+ D F+ + T+ L R A LC++A F+ Q+NI + +R
Sbjct: 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKR 61
Query: 517 KASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLN--KYFLL 574
+GDA+E +L I+ S++ +R+ PKV E+ FNS NK+ L++H N + L+
Sbjct: 62 DTAGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLV 121
Query: 575 MKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNF 634
MKGAPE I++RC++++ + + + ++ GERVL F L+L F
Sbjct: 122 MKGAPERILDRCSSILVQGKEIPLDKEMQDAF-QNAYLELGGLGERVLGFCQLNLPSGKF 180
Query: 635 PVNFKFSTDPMNFPSSGFRLIGLISLYDPPRP 666
P FKF TD +NFP+ +GL+S+ D
Sbjct: 181 PRGFKFDTDELNFPTEKLCFVGLMSMIDHHHH 212
>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546)
{Staphylococcus aureus [TaxId: 1280]}
Length = 380
Score = 166 bits (420), Expect = 2e-45
Identities = 43/423 (10%), Positives = 104/423 (24%), Gaps = 79/423 (18%)
Query: 414 VSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVK 473
V L+ S + L LG I + + ++ + +K
Sbjct: 11 VFLSEERCFDVSALTVYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLK 70
Query: 474 NG---VDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHF 530
+ + D+ + + K ++
Sbjct: 71 SLGLNSNWDM----------LFIVFSIHLIDI-------------LKKLSHDEIEAFMYQ 107
Query: 531 IQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMM 590
+P +Q++ + +F V N Y L + A +
Sbjct: 108 DEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTEL-------- 159
Query: 591 AESDKEAFLTAEKKYELEDKIKLFASKGERVLAFA-------DLHLGQNNFPVNFKFSTD 643
++ + L+ + A + + + + + F + +
Sbjct: 160 -------HVSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEI 212
Query: 644 PMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHIL 703
+ V ++ AG + + TG +L
Sbjct: 213 ILRP-----------------VDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLL 255
Query: 704 S-----ETSSDDNVFTGTDLRKITDEELK-DILETNKELVFARTSPLQKLRIVELYQSLD 757
++ +V ++ K + L + +
Sbjct: 256 PYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNK 315
Query: 758 EIVAVTGDGVNDAPALKKAD---IGIAMGITGS----EVSKQTADMILMD-DNFASIVLG 809
+ V + GD + D + +K IG G+ G E+ AD ++ ++
Sbjct: 316 DDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDN 375
Query: 810 IEE 812
+ E
Sbjct: 376 LLE 378
>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic
domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Length = 168
Score = 151 bits (381), Expect = 9e-43
Identities = 75/160 (46%), Positives = 98/160 (61%), Gaps = 4/160 (2%)
Query: 655 IGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS-DDNVF 713
+ DPPR V +I C AGIRVIM+TGD+ TA AI + I E D +
Sbjct: 12 TLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAY 71
Query: 714 TGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPAL 773
TG + + E ++ + FAR P K +IVE QS DEI A+TGDGVNDAPAL
Sbjct: 72 TGREFDDLPLAEQREA--CRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 129
Query: 774 KKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEG 813
KKA+IGIAMG +G+ V+K ++M+L DDNF++IV +EEG
Sbjct: 130 KKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168
>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase,
transmembrane domain M {Rabbit (Oryctolagus cuniculus)
[TaxId: 9986]}
Length = 472
Score = 122 bits (307), Expect = 6e-30
Identities = 64/356 (17%), Positives = 103/356 (28%), Gaps = 103/356 (28%)
Query: 114 DEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFS 173
H EE + GL+ +VKR LEK G N LP + + +++
Sbjct: 3 AAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLV 62
Query: 174 ALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESF 233
+L A +SF+ E E+ ++ L I + +QER + + E+
Sbjct: 63 RILLLAACISFVLAWFE---EGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEAL 119
Query: 234 AKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGE 293
+ P DK P +L E GE
Sbjct: 120 KEYEPAATE-------------------------QDKTPLQQKLDE-----------FGE 143
Query: 294 VEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKT 353
++ + +G +
Sbjct: 144 QL----------------------------SKVISLICVAVWLINIGHFNDPVHGGSWIR 175
Query: 354 TPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLT 413
I F +A + + VA +PEGL A +T
Sbjct: 176 GAIYY--------------------FKIA--------------VALAVAAIPEGLPAVIT 201
Query: 414 VSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDK--TGTLTQNKMTVLHLSFNR 467
L L +R+A KN IVR L +VETLG + ++ N V+ +
Sbjct: 202 TCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEVVCIFLTA 257
Score = 91.3 bits (226), Expect = 1e-19
Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 12/194 (6%)
Query: 759 IVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFD 818
+AV V P A I + + ++K+ A + S+ GR I++
Sbjct: 182 KIAVAL-AVAAIPEGLPAVITTCLALGTRRMAKKNAIV-------RSLPSVETLGRAIYN 233
Query: 819 NLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESN 878
N+K+ I Y+++SN+ E++ LG+P + V +L ++L TD PA +L + P+ +
Sbjct: 234 NMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLD 293
Query: 879 IMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYFHVMYDAGWDPMDLLNIRKSW 938
IM R PR+P+ + G Y + G ++ + + G + +
Sbjct: 294 IMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPG----VTYHQLT 349
Query: 939 ESNNNLEDSYHKMW 952
ED H
Sbjct: 350 HFMQCTEDHPHFEG 363
>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase
{Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 135
Score = 99.0 bits (246), Expect = 7e-25
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 34/158 (21%)
Query: 654 LIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVF 713
D + + A+ + GI+V M+TGD+ +A+AI+ + ++
Sbjct: 12 GTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL----------- 60
Query: 714 TGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPAL 773
+LV A P QK V+ Q+ E+VA GDG+NDAPAL
Sbjct: 61 ---------------------DLVIAEVLPHQKSEEVKKLQA-KEVVAFVGDGINDAPAL 98
Query: 774 KKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811
+AD+GIA+G +GS+V+ ++ D++L+ D+ +V I+
Sbjct: 99 AQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135
>d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A
{Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Length = 115
Score = 90.5 bits (224), Expect = 3e-22
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 241 ATVIRNG--SVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQ--DLKAENSSLTGEVEP 296
V R SV+ I + +V GDIV + +GDKVPADIR++ I+ L+ + S LTGE
Sbjct: 3 GKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVS 62
Query: 297 VTCTLGATNSFAV---ESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIA 343
V + +N++F TN+ +G G+V TG +T +GKI
Sbjct: 63 VIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIR 112
>d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus
cuniculus) [TaxId: 9986]}
Length = 239
Score = 87.6 bits (216), Expect = 8e-20
Identities = 30/191 (15%), Positives = 61/191 (31%), Gaps = 22/191 (11%)
Query: 490 KTLVRAACLCSKAEFEPNQDNIPMRE-------------RKASGDATEVGILHFIQPRIK 536
L LC+ + + N+ + K + TEV L ++
Sbjct: 51 VELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANA 110
Query: 537 SIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNK-----YFLLMKGAPEVIMERCTTMMA 591
+R K + F+ K + + +KGAPE +++RC +
Sbjct: 111 CNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV 170
Query: 592 ESDKEAFLTAEKKYELEDKIKLF--ASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPS 649
+ + +T K ++ IK + R LA A + S+
Sbjct: 171 GTTRVP-MTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSR-FMEYE 228
Query: 650 SGFRLIGLISL 660
+ +G++ +
Sbjct: 229 TDLTFVGVVGM 239
>d2feaa1 c.108.1.20 (A:2-227)
2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate
phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}
Length = 226
Score = 85.8 bits (211), Expect = 2e-19
Identities = 21/160 (13%), Positives = 50/160 (31%), Gaps = 9/160 (5%)
Query: 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKIT 722
R + + ++ I +++G + + F +
Sbjct: 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDW 134
Query: 723 DEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAM 782
+ + + K ++ ++ + + GD V D A K +D+ A
Sbjct: 135 PH--------SCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR 186
Query: 783 GITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKK 822
+E +Q + + D F I IE + + + L+
Sbjct: 187 DYLLNECREQNLNHLPYQD-FYEIRKEIENVKEVQEWLQN 225
>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase
{Pyrococcus horikoshii [TaxId: 53953]}
Length = 230
Score = 57.7 bits (138), Expect = 8e-10
Identities = 27/202 (13%), Positives = 55/202 (27%), Gaps = 56/202 (27%)
Query: 666 PAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKC-------------------HILSET 706
+AI GI +++VTG+ A+A +I I +
Sbjct: 22 EKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLAS 81
Query: 707 SSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEI------- 759
++ + ++ + + + + + + E+ L+
Sbjct: 82 MDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSG 141
Query: 760 -----------------------------VAVTGDGVNDAPALKKADIGIAMGITGSEVS 790
VA GDG ND A K +A+ ++
Sbjct: 142 FAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVA-QAPKIL 200
Query: 791 KQTADMILMDDNFASIVLGIEE 812
K+ AD + + I
Sbjct: 201 KENADYVTKKEYGEGGAEAIYH 222
>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 217
Score = 56.9 bits (136), Expect = 1e-09
Identities = 29/194 (14%), Positives = 60/194 (30%), Gaps = 12/194 (6%)
Query: 609 DKIKLFASKGERVLAFADLHL-GQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPA 667
D++ + V + G F + PS + P
Sbjct: 28 DELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQ-PSREQVQRLIAEQPPHLTPG 86
Query: 668 VPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELK 727
+ + + + ++V +++G I H+ S+ + L+ + E
Sbjct: 87 IRELVSRLQERNVQVFLISGGFRS------IVEHVASKLNIPATNVFANRLKFYFNGEYA 140
Query: 728 DILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMG-ITG 786
ET + +++++ +I+ + GDG D A AD I G
Sbjct: 141 GFDETQP--TAESGGKGKVIKLLKEKFHFKKIIMI-GDGATDMEACPPADAFIGFGGNVI 197
Query: 787 SEVSKQTADMILMD 800
+ K A + D
Sbjct: 198 RQQVKDNAKWYITD 211
>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 225
Score = 49.2 bits (116), Expect = 6e-07
Identities = 24/204 (11%), Positives = 51/204 (25%), Gaps = 54/204 (26%)
Query: 666 PAVPDAIDACHKAGIRVIMVTGDHPCT----AKAIAIKCHILSETSSDDNVFTGTDLRKI 721
++I + K G+ V +++G+ + I + E G+ +
Sbjct: 23 TKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFF 82
Query: 722 TDEELKDILETNKELVFARTSPLQKLRIVELYQSLD------------------------ 757
++E LE + R+ + R +D
Sbjct: 83 SNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYS 142
Query: 758 -------------------------EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQ 792
+ + V GD ND P + ++ K
Sbjct: 143 WHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPA-NATDNIKA 201
Query: 793 TADMILMDDNFASIVLGIEEGRLI 816
+D + I + L+
Sbjct: 202 VSDFVSDYSYGEEIGQIFKHFELM 225
>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon
Methanococcus jannaschii [TaxId: 2190]}
Length = 210
Score = 46.7 bits (109), Expect = 4e-06
Identities = 28/149 (18%), Positives = 51/149 (34%), Gaps = 13/149 (8%)
Query: 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKIT 722
P + I G V +V+G + + E D F ++
Sbjct: 75 TPTEGAEETIKELKNRGYVVAVVSGGFDI-------AVNKIKEKLGLDYAFA----NRLI 123
Query: 723 DEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAM 782
++ K + E++ +I ++ E GDG ND KKA + IA
Sbjct: 124 VKDGKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF 183
Query: 783 GITGSEVSKQTADMILMDDNFASIVLGIE 811
+ K+ AD+ + + I+ I+
Sbjct: 184 C--AKPILKEKADICIEKRDLREILKYIK 210
>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 206
Score = 46.4 bits (109), Expect = 4e-06
Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Query: 751 ELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDD 801
++SL V GD ND L +A GI V ++ +
Sbjct: 139 IAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAVHT 188
>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131
{Bacteroides thetaiotaomicron [TaxId: 818]}
Length = 260
Score = 46.8 bits (110), Expect = 5e-06
Identities = 28/109 (25%), Positives = 42/109 (38%), Gaps = 14/109 (12%)
Query: 721 ITDEELKDILETNKELVFARTSP---------LQKLRIVELYQSLDEI----VAVTGDGV 767
IT+EE K++L + R P K + ++ I GDG
Sbjct: 153 ITEEEEKEVLPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGG 212
Query: 768 NDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLI 816
ND L+ A IG+AMG E K AD + + I ++ +I
Sbjct: 213 NDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKHFGII 260
Score = 28.7 bits (63), Expect = 3.1
Identities = 6/32 (18%), Positives = 16/32 (50%)
Query: 666 PAVPDAIDACHKAGIRVIMVTGDHPCTAKAIA 697
+ +A++A H G+++ + TG ++
Sbjct: 22 SSTIEALEAAHAKGLKIFIATGRPKAIINNLS 53
>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus
subtilis [TaxId: 1423]}
Length = 285
Score = 44.5 bits (104), Expect = 3e-05
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 756 LDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEE 812
L+E AV GD +ND L+ A G+AMG E K AD + + ++ + ++
Sbjct: 229 LEETAAV-GDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 283
Score = 28.4 bits (62), Expect = 3.9
Identities = 15/76 (19%), Positives = 27/76 (35%), Gaps = 6/76 (7%)
Query: 666 PAVPDAIDACHKAGIRVIMVTGDHPCTAKAIA----IKCHILSETSSDDNVFTGTDLRKI 721
+A+ + GI V++ TG +I IK ++S + + G
Sbjct: 21 LENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRLYHHE 80
Query: 722 T--DEELKDILETNKE 735
T + DIL +
Sbjct: 81 TIDKKRAYDILSWLES 96
>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli
[TaxId: 562]}
Length = 271
Score = 44.2 bits (103), Expect = 4e-05
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 756 LDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEE 812
+EI+A+ GD ND ++ A +G+A+ K+ A+ + + + IE+
Sbjct: 213 PEEIMAI-GDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIEK 267
Score = 29.5 bits (65), Expect = 2.0
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 666 PAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCH 701
PAV +AI A G+ V++ TG + H
Sbjct: 24 PAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELH 59
>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga
maritima [TaxId: 2336]}
Length = 267
Score = 43.4 bits (101), Expect = 6e-05
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 745 QKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFA 804
+ + +EIV GD ND ++A + +AM E K+ +D++ + +N +
Sbjct: 195 LRFLRERMNWKKEEIVVF-GDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDS 252
Query: 805 SIVLGIEEGRLIFDNL 820
+ +E R+ D L
Sbjct: 253 GVSYVLE--RISTDCL 266
>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia
coli [TaxId: 562]}
Length = 269
Score = 42.6 bits (99), Expect = 1e-04
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 757 DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLI 816
+VA+ GD NDA LK A AMG +E KQ A D+N + I+ +
Sbjct: 207 QNVVAI-GDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQA---V 261
Query: 817 FDNLKK 822
DN
Sbjct: 262 LDNTYP 267
Score = 28.8 bits (63), Expect = 2.8
Identities = 5/34 (14%), Positives = 12/34 (35%)
Query: 664 PRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIA 697
+P K GI+ ++ +G+ +
Sbjct: 21 NQPRFMAQYQELKKRGIKFVVASGNQYYQLISFF 54
Score = 27.2 bits (59), Expect = 9.1
Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 441 SIRTICTDKTGTLTQNKMTVLHLSFNREIYHVK-NGVDV 478
+++ I TD GT + T F + +K G+
Sbjct: 1 AVKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKF 39
>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax
[TaxId: 5855]}
Length = 283
Score = 41.9 bits (97), Expect = 2e-04
Identities = 12/55 (21%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Query: 758 EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEE 812
+ V V GD ND L A+ ++ +K A +L + V + +
Sbjct: 224 DQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 277
Score = 27.7 bits (60), Expect = 7.7
Identities = 7/32 (21%), Positives = 10/32 (31%)
Query: 666 PAVPDAIDACHKAGIRVIMVTGDHPCTAKAIA 697
DAI + G V + TG +
Sbjct: 31 SENIDAIKEAIEKGYMVSICTGRSKVGILSAF 62
>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate
phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii
[TaxId: 53953]}
Length = 243
Score = 40.0 bits (92), Expect = 8e-04
Identities = 12/57 (21%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Query: 741 TSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMI 797
+ L E AV GD ND P + D +G + ++ + +I
Sbjct: 181 GKAAKILLDFYKRLGQIESYAV-GDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSII 236
>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus
influenzae, HI1679 [TaxId: 727]}
Length = 177
Score = 36.2 bits (83), Expect = 0.008
Identities = 11/51 (21%), Positives = 16/51 (31%), Gaps = 1/51 (1%)
Query: 749 IVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILM 799
+++ E A GD D PA A+ K D +L
Sbjct: 88 LMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLS 137
>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate
phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}
Length = 232
Score = 36.2 bits (82), Expect = 0.012
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Query: 748 RIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMG 783
I+ YQ L + + GDG NDAP L+ D + +
Sbjct: 191 WIIATYQQLSGKRPTTLGL-GDGPNDAPLLEVMDYAVIVK 229
Score = 28.9 bits (63), Expect = 2.9
Identities = 3/33 (9%), Positives = 10/33 (30%)
Query: 670 DAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHI 702
+ +A + VI+ + + +
Sbjct: 28 PWLTRLREANVPVILCSSKTSAEMLYLQKTLGL 60
>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 291
Score = 33.4 bits (76), Expect = 0.099
Identities = 19/158 (12%), Positives = 46/158 (29%), Gaps = 16/158 (10%)
Query: 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHI-LSETSSDDNVFTGTDLRKI 721
+ + + GI V + + + + + + S N + +
Sbjct: 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVL 194
Query: 722 TDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALK---KADI 778
+ + I NK L+ + I+ + GD D +
Sbjct: 195 KGFKGELIHVFNK-----HDGALKNTDYFSQLKDNSNIILL-GDSQGDLRMADGVANVEH 248
Query: 779 GIAMGITGSEVSKQ------TADMILMDDNFASIVLGI 810
+ +G V + + D++L+ + +V I
Sbjct: 249 ILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSI 286
>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953
{Synechocystis sp. pcc 6803 [TaxId: 1148]}
Length = 244
Score = 30.8 bits (68), Expect = 0.63
Identities = 7/46 (15%), Positives = 13/46 (28%), Gaps = 1/46 (2%)
Query: 758 EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNF 803
V GD ND + + G+ + D ++
Sbjct: 179 SQTLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHY 223
>d2pmra1 a.8.11.1 (A:3-77) Uncharacterized protein MTH1690
{Methanobacterium thermoautotrophicum [TaxId: 145262]}
Length = 75
Score = 27.8 bits (62), Expect = 1.5
Identities = 10/60 (16%), Positives = 24/60 (40%), Gaps = 6/60 (10%)
Query: 568 LNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADL 627
+ K L++ + ++ D+EA + Y +D + KG+ + +F +
Sbjct: 5 IEKDLELLEKN----LMEMKSIKLSDDEEAVVERALNY-RDDS-VYYLEKGDHITSFGCI 58
>d1vhca_ c.1.10.1 (A:) Hypothetical protein HI0047 {Haemophilus
influenzae [TaxId: 727]}
Length = 212
Score = 28.8 bits (64), Expect = 2.3
Identities = 9/51 (17%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Query: 652 FRLIGLISLYDPPRPA-VPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCH 701
R + ++ + + D K G+ V +T A AI +
Sbjct: 11 LRELKIVPVIALDNADDILPLADTLAKNGLSVAEITFRSEAAADAIRLLRA 61
>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}
Length = 250
Score = 28.5 bits (62), Expect = 3.0
Identities = 7/62 (11%), Positives = 22/62 (35%)
Query: 652 FRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDN 711
+ G++ + P + + G+ ++++T T + +A + D
Sbjct: 8 CDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSV 67
Query: 712 VF 713
+
Sbjct: 68 FY 69
>d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId:
562]}
Length = 213
Score = 28.4 bits (63), Expect = 3.1
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Query: 653 RLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIA 697
++ +I + AVP A G+RV+ VT C AI
Sbjct: 16 PVVPVIVVKKLEH-AVP-MAKALVAGGVRVLNVTLRTECAVDAIR 58
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase
{Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Length = 653
Score = 28.7 bits (64), Expect = 3.8
Identities = 4/13 (30%), Positives = 7/13 (53%)
Query: 672 IDACHKAGIRVIM 684
I+ H G+ +I
Sbjct: 72 IETAHTIGLGIIQ 84
>d1q5na_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase
(CMLE) {Acinetobacter calcoaceticus [TaxId: 471]}
Length = 444
Score = 28.5 bits (62), Expect = 3.9
Identities = 9/58 (15%), Positives = 23/58 (39%)
Query: 89 ILRFIHKEKEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEK 146
++ K + L+D+ ++VD + +L I G + ++ L++
Sbjct: 386 VVEAACKTAVAEQKHLKDIISQVDEVKQYFNPSQLDEIFKPESYLGNIQDQIDAVLQE 443
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea
[TaxId: 489]}
Length = 554
Score = 28.8 bits (63), Expect = 4.3
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 672 IDACHKAGIRVIM 684
I A H+AGI ++
Sbjct: 169 IAALHEAGISAVV 181
>d1ve4a1 c.94.1.1 (A:1-206) ATP phosphoribosyltransferase
(ATP-PRTase, HisG), catalytic domain {Thermus
thermophilus [TaxId: 274]}
Length = 206
Score = 27.3 bits (60), Expect = 8.2
Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 6/90 (6%)
Query: 673 DACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILET 732
+ G +V A+ + D V TG LR E++ + +
Sbjct: 121 RLLKERGWAADVVELSGNIELAAVTGLADAVV-----DVVQTGATLRAAGLVEVEVLAHS 175
Query: 733 NKELVFARTS-PLQKLRIVELYQSLDEIVA 761
LV R + L++ + L Q L E+
Sbjct: 176 TARLVVNRQALKLKRAVLKPLIQRLRELSG 205
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.135 0.394
Gapped
Lambda K H
0.267 0.0663 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,484,355
Number of extensions: 167664
Number of successful extensions: 647
Number of sequences better than 10.0: 1
Number of HSP's gapped: 627
Number of HSP's successfully gapped: 52
Length of query: 961
Length of database: 2,407,596
Length adjustment: 94
Effective length of query: 867
Effective length of database: 1,116,976
Effective search space: 968418192
Effective search space used: 968418192
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (25.9 bits)