BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6877
(171 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 18 DEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGDISLAE 75
D + L + F A+DTDG+G I + +L+ AL GV A +K L D N SG+I+ E
Sbjct: 25 DNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDE 84
Query: 76 FI---HYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDK 132
F H++ +R GF D + DG++D E++ A G + E + L+++ D+
Sbjct: 85 FKDLHHFILS----MREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDR 140
Query: 133 DGSLEISFNEWRDFLLYCPFSDIREQNVSA----QKTWKLIF 170
+ F+++ + ++ R +NV A ++T ++ F
Sbjct: 141 QRRGSLGFDDYVELSIFV----CRVRNVFAFYDRERTGQVTF 178
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 78/141 (55%), Gaps = 15/141 (10%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQ--KFLERSDSNRSGD 70
+L +E+ L++LF +DTD +G I +L LK G + ++ ++ +D ++SG
Sbjct: 3 RLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGT 62
Query: 71 ISLAEFI----HYVK-EHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGID---IDENE 122
I EFI H K E E++L FS+ DK+ G I L E+Q+A ++ G+D ID+
Sbjct: 63 IDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDD-- 120
Query: 123 AKKLLKRMDKDGSLEISFNEW 143
++K +D+D +I + E+
Sbjct: 121 ---MIKEIDQDNDGQIDYGEF 138
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 17 EDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERSDSNRSGDISLAEF 76
E EE L F D DG+G I + ++ +A KDFG+ ++ ++ D + G I EF
Sbjct: 79 EREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEIDQDNDGQIDYGEF 138
Query: 77 IHYVKEHEKHLRLG 90
+++ + + +G
Sbjct: 139 AAMMRKRKGNGGIG 152
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 70/138 (50%), Gaps = 8/138 (5%)
Query: 14 LPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQ--KFLERSDSNRSGDI 71
L +E ++ + + F DTDG+G ID +L A++ G + K + D + SG I
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTI 61
Query: 72 SLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKK 125
EF+ + ++ + + F D ++ GKI + L++ +ELG ++ + E ++
Sbjct: 62 DFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQE 121
Query: 126 LLKRMDKDGSLEISFNEW 143
++ D+DG E++ E+
Sbjct: 122 MIDEADRDGDGEVNEEEF 139
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 9/142 (6%)
Query: 9 MLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQ--KFLERSDSN 66
++ L +E+ L++ F +D D +G+I +L LK G + ++ + +D +
Sbjct: 16 VIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVD 75
Query: 67 RSGDISLAEFI----HYVK-EHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDEN 121
SG I EFI H K E E HL F++ DK+ G I ELQ+A +E G +++
Sbjct: 76 NSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFG--VEDV 133
Query: 122 EAKKLLKRMDKDGSLEISFNEW 143
++L + +D+D I +NE+
Sbjct: 134 RIEELXRDVDQDNDGRIDYNEF 155
Score = 33.1 bits (74), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 17 EDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERSDSNRSGDISLAEF 76
E E+ L F D DG+G I +L +A ++FGV + ++ D + G I EF
Sbjct: 96 EREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVRIEELXRDVDQDNDGRIDYNEF 155
Query: 77 I 77
+
Sbjct: 156 V 156
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 66/137 (48%), Gaps = 6/137 (4%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 71 ISLAEFIHYV----KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKL 126
I EF+ + K+ E+ +R F DK+ +G I EL+ LG + + E ++
Sbjct: 63 IDFPEFLTMMARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 122
Query: 127 LKRMDKDGSLEISFNEW 143
++ D DG ++++ E+
Sbjct: 123 IREADIDGDGQVNYEEF 139
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 26 FVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGDISLAEFIHYV--- 80
F D DG+G I +L ++ G + A Q + D++ +G I EF++ +
Sbjct: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
Query: 81 ---KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLE 137
+ E+ L+ F DK+Q+G I EL+ LG + + E ++++ D DG +
Sbjct: 77 MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQ 136
Query: 138 ISFNEWRDFLL 148
I+++E+ ++
Sbjct: 137 INYDEFVKVMM 147
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 1 MLTLKCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QK 58
+L K E + +L +E ++ F D DG+G I +L ++ G + A Q
Sbjct: 258 ILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQD 317
Query: 59 FLERSDSNRSGDISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQ 112
+ D++ +G I EF+ + + E+ +R F DK+ +G I EL+
Sbjct: 318 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 377
Query: 113 ELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
LG + + E ++++ D DG ++++ E+
Sbjct: 378 NLGEKLTDEEVDEMIREADIDGDGQVNYEEF 408
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 8/151 (5%)
Query: 1 MLTLKCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QK 58
+L K E L +L +E ++ F D DG+G I +L ++ G + A Q
Sbjct: 291 ILGHKLEYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQD 350
Query: 59 FLERSDSNRSGDISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQ 112
+ D++ G I EF+ + + E+ +R F DK+ +G I EL+
Sbjct: 351 MINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 410
Query: 113 ELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
LG + + E ++++ D DG ++++ E+
Sbjct: 411 NLGEKLTDEEVDEMIREADIDGDGQVNYEEF 441
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 8/151 (5%)
Query: 1 MLTLKCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QK 58
+L K E L +L +E ++ F D DG+G I +L ++ G + A Q
Sbjct: 291 ILGHKLEYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQD 350
Query: 59 FLERSDSNRSGDISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQ 112
+ D++ G I EF+ + + E+ +R F DK+ +G I EL+
Sbjct: 351 MINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 410
Query: 113 ELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
LG + + E ++++ D DG ++++ E+
Sbjct: 411 NLGEKLTDEEVDEMIREADIDGDGQVNYEEF 441
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 1 MLTLKCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QK 58
+L K E + +L +E ++ F D DG+G I +L ++ G + A Q
Sbjct: 255 ILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQD 314
Query: 59 FLERSDSNRSGDISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQ 112
+ D++ +G I EF+ + + E+ +R F DK+ +G I EL+
Sbjct: 315 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 374
Query: 113 ELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
LG + + E ++++ D DG ++++ E+
Sbjct: 375 NLGEKLTDEEVDEMIREADIDGDGQVNYEEF 405
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 1 MLTLKCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QK 58
+L K E + +L +E ++ F D DG+G I +L ++ G + A Q
Sbjct: 292 ILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQD 351
Query: 59 FLERSDSNRSGDISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQ 112
+ D++ +G I EF+ + + E+ +R F DK+ +G I EL+
Sbjct: 352 MINEVDADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 411
Query: 113 ELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
LG + + E ++++ D DG ++++ E+
Sbjct: 412 NLGEKLTDEEVDEMIREADIDGDGQVNYEEF 442
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 1 MLTLKCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QK 58
+L K E + +L +E ++ F D DG+G I +L ++ G + A Q
Sbjct: 292 ILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQD 351
Query: 59 FLERSDSNRSGDISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQ 112
+ D++ +G I EF+ + + E+ +R F DK+ +G I EL+
Sbjct: 352 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 411
Query: 113 ELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
LG + + E ++++ D DG ++++ E+
Sbjct: 412 NLGEKLTDEEVDEMIREADIDGDGQVNYEEF 442
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 1 MLTLKCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QK 58
+L K E + +L +E ++ F D DG+G I +L ++ G + A Q
Sbjct: 293 ILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQD 352
Query: 59 FLERSDSNRSGDISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQ 112
+ D++ +G I EF+ + + E+ +R F DK+ +G I EL+
Sbjct: 353 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 412
Query: 113 ELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
LG + + E ++++ D DG ++++ E+
Sbjct: 413 NLGEKLTDEEVDEMIREADIDGDGQVNYEEF 443
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 1 MLTLKCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QK 58
+L K E + +L +E ++ F D DG+G I +L ++ G + A Q
Sbjct: 292 ILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQD 351
Query: 59 FLERSDSNRSGDISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQ 112
+ D++ +G I EF+ + + E+ +R F DK+ +G I EL+
Sbjct: 352 MINEVDADGNGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 411
Query: 113 ELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
LG + + E ++++ D DG ++++ E+
Sbjct: 412 NLGEKLTDEEVDEMIREADIDGDGQVNYEEF 442
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 1 MLTLKCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QK 58
+L K E + +L +E ++ F D DG+G I +L ++ G + A Q
Sbjct: 292 ILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQD 351
Query: 59 FLERSDSNRSGDISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQ 112
+ D++ +G I EF+ + + E+ +R F DK+ +G I EL+
Sbjct: 352 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 411
Query: 113 ELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
LG + + E ++++ D DG ++++ E+
Sbjct: 412 NLGEKLTDEEVDEMIREADIDGDGQVNYEEF 442
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 26 FVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGDISLAEFIHYV--- 80
F D DG+G I +L ++ G + A Q + D++ +G I EF++ +
Sbjct: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
Query: 81 ---KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLE 137
+ E+ L+ F DK+Q+G I EL+ LG + + E ++++ D DG +
Sbjct: 77 MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQ 136
Query: 138 ISFNEWRDFLL 148
I++ E+ ++
Sbjct: 137 INYEEFVKVMM 147
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 1 MLTLKCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QK 58
+L K E + +L +E ++ F D DG+G I +L ++ G + A Q
Sbjct: 258 ILGHKLEYNSRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQD 317
Query: 59 FLERSDSNRSGDISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQ 112
+ D++ +G I EF+ + + E+ +R F DK+ +G I EL+
Sbjct: 318 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 377
Query: 113 ELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
LG + + E ++++ D DG ++++ E+
Sbjct: 378 NLGEKLTDEEVDEMIREADIDGDGQVNYEEF 408
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 8/151 (5%)
Query: 1 MLTLKCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QK 58
+L K E + +L +E ++ F D DG+G I +L ++ G + A Q
Sbjct: 291 ILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQD 350
Query: 59 FLERSDSNRSGDISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQ 112
+ D++ G I EF+ + + E+ +R F DK+ +G I EL+
Sbjct: 351 MINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 410
Query: 113 ELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
LG + + E ++++ D DG ++++ E+
Sbjct: 411 NLGEKLTDEEVDEMIREADIDGDGQVNYEEF 441
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 8/151 (5%)
Query: 1 MLTLKCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QK 58
+L K E + +L +E ++ F D DG+G I +L ++ G + A Q
Sbjct: 292 ILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQD 351
Query: 59 FLERSDSNRSGDISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQ 112
+ D++ G I EF+ + + E+ +R F DK+ +G I EL+
Sbjct: 352 MINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 411
Query: 113 ELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
LG + + E ++++ D DG ++++ E+
Sbjct: 412 NLGEKLTDEEVDEMIREADIDGDGQVNYEEF 442
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I EF+ + + E+ +R F DK+ +G I EL+ LG + + E
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 123
Query: 125 KLLKRMDKDGSLEISFNEW 143
++++ D DG ++++ E+
Sbjct: 124 QMIREADIDGDGQVNYEEF 142
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 11/125 (8%)
Query: 34 NGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGDISLAEFIHYV---------KE 82
+G I +L K ++ G + Q+ ++ D + SG + EF+ + +
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 83 HEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNE 142
E+ L F DKN DG IDL EL+ Q G I E++ ++L+K DK+ I ++E
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 143 WRDFL 147
W +F+
Sbjct: 153 WLEFM 157
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I EF+ + + E+ +R F DK+ +G I EL+ LG + + E
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVD 123
Query: 125 KLLKRMDKDGSLEISFNEW 143
++++ D DG ++++ E+
Sbjct: 124 EMIREADIDGDGQVNYEEF 142
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I EF+ + + E+ +R F DK+ +G I EL+ LG + + E
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVD 122
Query: 125 KLLKRMDKDGSLEISFNEW 143
++++ D DG ++++ E+
Sbjct: 123 EMIREADIDGDGQVNYEEF 141
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 1 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 60
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I EF+ + + E+ +R F DK+ +G I EL+ LG + + E
Sbjct: 61 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 120
Query: 125 KLLKRMDKDGSLEISFNEW 143
++++ D DG ++++ E+
Sbjct: 121 EMIREADIDGDGQVNYEEF 139
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I EF+ + + E+ +R F DK+ +G I EL+ LG + + E
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 123
Query: 125 KLLKRMDKDGSLEISFNEW 143
++++ D DG ++++ E+
Sbjct: 124 EMIREADIDGDGQVNYEEF 142
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I EF+ + + E+ +R F DK+ +G I EL+ LG + + E
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 123
Query: 125 KLLKRMDKDGSLEISFNEW 143
++++ D DG ++++ E+
Sbjct: 124 EMIREADIDGDGQVNYEEF 142
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 1 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 60
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I EF+ + + E+ +R F DK+ +G I EL+ LG + + E
Sbjct: 61 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 120
Query: 125 KLLKRMDKDGSLEISFNEW 143
++++ D DG ++++ E+
Sbjct: 121 EMIREADIDGDGQVNYEEF 139
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I EF+ + + E+ +R F DK+ +G I EL+ LG + + E
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 123
Query: 125 KLLKRMDKDGSLEISFNEW 143
++++ D DG ++++ E+
Sbjct: 124 EMIREADIDGDGQVNYEEF 142
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 2 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 61
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I EF+ + + E+ +R F DK+ +G I EL+ LG + + E
Sbjct: 62 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 121
Query: 125 KLLKRMDKDGSLEISFNEW 143
++++ D DG ++++ E+
Sbjct: 122 EMIREADIDGDGQVNYEEF 140
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I EF+ + + E+ +R F DK+ +G I EL+ LG + + E
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 123
Query: 125 KLLKRMDKDGSLEISFNEW 143
++++ D DG ++++ E+
Sbjct: 124 EMIREADIDGDGQVNYEEF 142
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 9 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 68
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I EF+ + + E+ +R F DK+ +G I EL+ LG + + E
Sbjct: 69 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 128
Query: 125 KLLKRMDKDGSLEISFNEW 143
++++ D DG ++++ E+
Sbjct: 129 EMIREADIDGDGQVNYEEF 147
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I EF+ + + E+ +R F DK+ +G I EL+ LG + + E
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 122
Query: 125 KLLKRMDKDGSLEISFNEW 143
++++ D DG ++++ E+
Sbjct: 123 EMIREADIDGDGQVNYEEF 141
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I EF+ + + E+ +R F DK+ +G I EL+ LG + + E
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 122
Query: 125 KLLKRMDKDGSLEISFNEW 143
++++ D DG ++++ E+
Sbjct: 123 EMIREADIDGDGQVNYEEF 141
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 5 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 64
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I EF+ + + E+ +R F DK+ +G I EL+ LG + + E
Sbjct: 65 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 124
Query: 125 KLLKRMDKDGSLEISFNEW 143
++++ D DG ++++ E+
Sbjct: 125 EMIREADIDGDGQVNYEEF 143
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 7 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 66
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I EF+ + + E+ +R F DK+ +G I EL+ LG + + E
Sbjct: 67 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 126
Query: 125 KLLKRMDKDGSLEISFNEW 143
++++ D DG ++++ E+
Sbjct: 127 EMIREADIDGDGQVNYEEF 145
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 8/138 (5%)
Query: 14 LPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGDI 71
L +E ++ F D DG+G I +L ++ G + A Q + D++ +G I
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 72 SLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKK 125
EF+ + + E+ +R F DK+ +G I EL+ LG + + E +
Sbjct: 61 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 120
Query: 126 LLKRMDKDGSLEISFNEW 143
+++ D DG ++++ E+
Sbjct: 121 MIREADIDGDGQVNYEEF 138
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I EF+ + + E+ +R F DK+ +G I EL+ LG + + E
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 123
Query: 125 KLLKRMDKDGSLEISFNEW 143
++++ D DG ++++ E+
Sbjct: 124 EMIREADIDGDGQVNYEEF 142
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I EF+ + + E+ +R F DK+ +G I EL+ LG + + E
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 123
Query: 125 KLLKRMDKDGSLEISFNEW 143
++++ D DG ++++ E+
Sbjct: 124 EMIREADIDGDGQVNYEEF 142
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 69/137 (50%), Gaps = 8/137 (5%)
Query: 15 PQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQ--KFLERSDSNRSGDIS 72
+E ++ + + F D DG G ID+ +L A++ G + K + D +G ++
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 73 LAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKL 126
+F+ + K+ ++ + F D ++ GKI + L++ +ELG ++ + E +++
Sbjct: 61 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEM 120
Query: 127 LKRMDKDGSLEISFNEW 143
+ D+DG E+S E+
Sbjct: 121 IDEADRDGDGEVSEQEF 137
Score = 29.6 bits (65), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 8 AMLKLKLPQED-EERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSD 64
++ K+ ++D +E + K F D D GKI +L + K+ G + Q+ ++ +D
Sbjct: 66 TVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEAD 125
Query: 65 SNRSGDISLAEFIHYVK 81
+ G++S EF+ +K
Sbjct: 126 RDGDGEVSEQEFLRIMK 142
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGT 62
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I EF+ + + E+ +R F DK+ +G I EL+ LG + + E
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 122
Query: 125 KLLKRMDKDGSLEISFNEW 143
++++ D DG ++++ E+
Sbjct: 123 EMIREADIDGDGQVNYEEF 141
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I EF+ + + E+ +R F DK+ +G I EL+ LG + + E
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 122
Query: 125 KLLKRMDKDGSLEISFNEW 143
++++ D DG ++++ E+
Sbjct: 123 EMIREADIDGDGQVNYEEF 141
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I EF+ + + E+ +R F DK+ +G I EL+ LG + + E
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 122
Query: 125 KLLKRMDKDGSLEISFNEW 143
++++ D DG ++++ E+
Sbjct: 123 EMIREADIDGDGQVNYEEF 141
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Query: 26 FVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGDISLAEFIHYV--- 80
F D DG+G I +L ++ G + A Q + D++ +G I EF+ +
Sbjct: 14 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 73
Query: 81 ---KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLE 137
+ E+ +R F DK+ +G I EL+ LG + + E ++++ D DG +
Sbjct: 74 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 133
Query: 138 ISFNEW 143
+++ E+
Sbjct: 134 VNYEEF 139
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Query: 26 FVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGDISLAEFIHYV--- 80
F D DG+G I +L ++ G + A Q + D++ +G I EF+ +
Sbjct: 12 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 71
Query: 81 ---KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLE 137
+ E+ +R F DK+ +G I EL+ LG + + E ++++ D DG +
Sbjct: 72 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 131
Query: 138 ISFNEW 143
+++ E+
Sbjct: 132 VNYEEF 137
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I EF+ + + E+ +R F DK+ +G I EL+ LG + + E
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 123
Query: 125 KLLKRMDKDGSLEISFNEW 143
++++ D DG ++++ E+
Sbjct: 124 EMIRESDIDGDGQVNYEEF 142
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ G
Sbjct: 295 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGT 354
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I EF+ + + E+ +R F DK+ +G I EL+ LG + + E
Sbjct: 355 IDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 414
Query: 125 KLLKRMDKDGSLEISFNEW 143
++++ D DG ++++ E+
Sbjct: 415 EMIREADIDGDGQVNYEEF 433
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 8/131 (6%)
Query: 26 FVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGDISLAEFIHYV--- 80
F D DG+G I +L ++ G + A Q + D++ +G I EF++ +
Sbjct: 13 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 72
Query: 81 ---KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLE 137
+ E+ L+ F DK+ +G I EL+ LG + + E ++++ D DG +
Sbjct: 73 MKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQ 132
Query: 138 ISFNEWRDFLL 148
+++ E+ ++
Sbjct: 133 VNYEEFVQVMM 143
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 4/133 (3%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVH--SLYAQKFLERSDSNRSGD 70
+P + R+ + F+ +D D +G ++I++L G+ A + + D++ +G
Sbjct: 44 TIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGH 103
Query: 71 ISLAEFIHYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRM 130
IS EF+ K E L F D+N+ G ++ E+ A Q+LG I++ LL R+
Sbjct: 104 ISFYEFMAMYKFMELAYNL-FVMNDRNRSGTLEPHEILPALQQLGFYINQ-RTSLLLHRL 161
Query: 131 DKDGSLEISFNEW 143
G N W
Sbjct: 162 FARGMAFCDLNCW 174
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 8/131 (6%)
Query: 26 FVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGDISLAEFIHYV--- 80
F D DG+G I +L ++ G + A Q + D++ +G I EF++ +
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 75
Query: 81 ---KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLE 137
+ E+ L+ F DK+ +G I EL+ LG + + E ++++ D DG +
Sbjct: 76 MKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQ 135
Query: 138 ISFNEWRDFLL 148
+++ E+ ++
Sbjct: 136 VNYEEFVQVMM 146
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 71/141 (50%), Gaps = 8/141 (5%)
Query: 11 KLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQ--KFLERSDSNRS 68
++ L +E ++ + + F DTDG+G ID +L A++ G + K + D + S
Sbjct: 19 RVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGS 78
Query: 69 GDISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENE 122
G I EF+ + ++ + + F D + G I +++L++ +ELG ++ E E
Sbjct: 79 GTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEE 138
Query: 123 AKKLLKRMDKDGSLEISFNEW 143
++++ D++ EI +E+
Sbjct: 139 LQEMIAEADRNDDNEIDEDEF 159
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 11/129 (8%)
Query: 26 FVALDTDGNGKIDIHDLSKALKDFGVHSLYAQ--KFLERSDSNRSGDISLAEF----IHY 79
F D DG G I + +L ++ G + +E D + SG I EF +
Sbjct: 23 FDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 82
Query: 80 VKE-----HEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDG 134
+KE E+ L F D+N DG ID +EL + F+ G + + E + L+K DK+
Sbjct: 83 MKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNN 142
Query: 135 SLEISFNEW 143
I F+E+
Sbjct: 143 DGRIDFDEF 151
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 9/131 (6%)
Query: 22 LEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGDISLAEFIHY 79
L +F+ALD D +G + ++ LK G + + L DSN SG I +F+
Sbjct: 59 LRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAA 118
Query: 80 VKEHEKHLR-----LGFSHLDKNQDGKIDLQELQKAFQELGID--IDENEAKKLLKRMDK 132
+ + +L+ + F D + +GKI ++EL++ F I+ + + LL+ +D
Sbjct: 119 TIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDL 178
Query: 133 DGSLEISFNEW 143
+G EI F+E+
Sbjct: 179 NGDGEIDFHEF 189
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 8/131 (6%)
Query: 26 FVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGDISLAEFIHYV--- 80
F D DG+G I +L ++ G + A Q + D++ +G I EF++ +
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 75
Query: 81 ---KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLE 137
+ E+ L+ F DK+ +G I EL+ LG + + E ++++ D DG +
Sbjct: 76 MKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQ 135
Query: 138 ISFNEWRDFLL 148
+++ E+ ++
Sbjct: 136 VNYEEFVQVMM 146
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I EF+ + + E+ +R F DK+ +G I EL+ LG + + E
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 122
Query: 125 KLLKRMDKDGSLEISFNEW 143
++++ + DG ++++ E+
Sbjct: 123 EMIREANIDGDGQVNYEEF 141
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 11/129 (8%)
Query: 26 FVALDTDGNGKIDIHDLSKALKDFGVHSLYAQ--KFLERSDSNRSGDISLAEF----IHY 79
F D DG G I + +L ++ G + +E D + SG I EF +
Sbjct: 23 FDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 82
Query: 80 VKE-----HEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDG 134
+KE E+ L F D+N DG ID +EL + F+ G + + E + L+K DK+
Sbjct: 83 MKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNN 142
Query: 135 SLEISFNEW 143
I F+E+
Sbjct: 143 DGRIDFDEF 151
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQ--KFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A+ + D + +G
Sbjct: 3 QLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGT 62
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
+ EF+ + ++E+ +R F DK+ +G + EL+ LG + + E
Sbjct: 63 VDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVD 122
Query: 125 KLLKRMDKDGSLEISFNEW 143
++++ D DG ++++ E+
Sbjct: 123 EMIRAADTDGDGQVNYEEF 141
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 3 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I EF+ + ++ E+ L F D++ +G I EL+ LG + ++E
Sbjct: 63 IDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVD 122
Query: 125 KLLKRMDKDGSLEISFNEW 143
++++ D DG I++ E+
Sbjct: 123 EMIREADIDGDGHINYEEF 141
Score = 27.3 bits (59), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 16 QEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSDSNRSGDISL 73
Q+ EE L + F D DGNG I +L + + G + + + +D + G I+
Sbjct: 79 QDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINY 138
Query: 74 AEFIHYV 80
EF+ +
Sbjct: 139 EEFVRMM 145
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 11/129 (8%)
Query: 26 FVALDTDGNGKIDIHDLSKALKDFGVHSLYAQ--KFLERSDSNRSGDISLAEF----IHY 79
F D DG G I +L ++ G + + +E D + SG I EF +
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85
Query: 80 VKE-----HEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDG 134
+KE E+ L F DKN DG ID++EL + + G + E + + L+K DK+
Sbjct: 86 MKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNN 145
Query: 135 SLEISFNEW 143
I F+E+
Sbjct: 146 DGRIDFDEF 154
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 11/129 (8%)
Query: 26 FVALDTDGNGKIDIHDLSKALKDFGVHSLYAQ--KFLERSDSNRSGDISLAEF----IHY 79
F D DG G I +L ++ G + + +E D + SG I EF +
Sbjct: 23 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 82
Query: 80 VKE-----HEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDG 134
+KE E+ L F DKN DG ID++EL + + G + E + + L+K DK+
Sbjct: 83 MKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNN 142
Query: 135 SLEISFNEW 143
I F+E+
Sbjct: 143 DGRIDFDEF 151
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 3 ELTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I EF+ + ++ E+ L F D++ +G I EL+ LG + ++E
Sbjct: 63 IDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVD 122
Query: 125 KLLKRMDKDGSLEISFNEW 143
++++ D DG I++ E+
Sbjct: 123 EMIREADIDGDGHINYEEF 141
Score = 27.3 bits (59), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 16 QEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSDSNRSGDISL 73
Q+ EE L + F D DGNG I +L + + G + + + +D + G I+
Sbjct: 79 QDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINY 138
Query: 74 AEFIHYV 80
EF+ +
Sbjct: 139 EEFVRMM 145
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 11/129 (8%)
Query: 26 FVALDTDGNGKIDIHDLSKALKDFGVHSLYAQ--KFLERSDSNRSGDISLAEF----IHY 79
F D DG G I +L ++ G + + +E D + SG I EF +
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85
Query: 80 VKE-----HEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDG 134
+KE E+ L F DKN DG ID++EL + + G + E + + L+K DK+
Sbjct: 86 MKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNN 145
Query: 135 SLEISFNEW 143
I F+E+
Sbjct: 146 DGRIDFDEF 154
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 11/125 (8%)
Query: 34 NGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGDISLAEFIHYV---------KE 82
+G I +L K ++ G + Q+ ++ D + SG + EF+ + +
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 83 HEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNE 142
E+ L F DKN DG IDL+EL+ Q G I E++ ++L+K DK+ I ++E
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 143 WRDFL 147
+ +F+
Sbjct: 153 FLEFM 157
Score = 29.6 bits (65), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 19 EERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSDSNRSGDISLAEF 76
EE L LF D + +G ID+ +L L+ G + ++ ++ D N G I EF
Sbjct: 94 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 153
Query: 77 IHYVK 81
+ ++K
Sbjct: 154 LEFMK 158
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 11/125 (8%)
Query: 34 NGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGDISLAEFIHYV---------KE 82
+G I +L K ++ G + Q+ ++ D + SG + EF+ + +
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 83 HEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNE 142
E+ L F DKN DG IDL+EL+ Q G I E++ ++L+K DK+ I ++E
Sbjct: 93 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 143 WRDFL 147
+ +F+
Sbjct: 153 FLEFM 157
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 19 EERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSDSNRSGDISLAEF 76
EE L LF D + +G ID+ +L L+ G + ++ ++ D N G I EF
Sbjct: 94 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 153
Query: 77 IHYVK 81
+ ++K
Sbjct: 154 LEFMK 158
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 11/129 (8%)
Query: 26 FVALDTDGNGKIDIHDLSKALKDFGVHSLYAQ--KFLERSDSNRSGDISLAEF----IHY 79
F D DG G I +L ++ G + + +E D + SG I EF +
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85
Query: 80 VKE-----HEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDG 134
+KE E+ L F DKN DG ID++EL + + G + E + + L+K DK+
Sbjct: 86 MKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNN 145
Query: 135 SLEISFNEW 143
I F+E+
Sbjct: 146 DGRIDFDEF 154
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 50 GVHSLYAQKFLERSDSNRSGDISLAEFIHYVKEHEKHLRLGFSHLDKNQDGKIDLQELQK 109
G S A+ + + G + L E E ++ +R F D + G ID +EL+
Sbjct: 1 GSMSYKAKTVVSARRDQKKGRVGLTE------EQKQEIREAFDLFDTDGSGTIDAKELKV 54
Query: 110 AFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
A + LG + + E KK++ +DKDGS I F E+
Sbjct: 55 AMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEF 88
Score = 34.3 bits (77), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 11 KLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQ--KFLERSDSNRS 68
++ L +E ++ + + F DTDG+G ID +L A++ G + K + D + S
Sbjct: 21 RVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGS 80
Query: 69 GDISLAEFIHYV 80
G I EF+ +
Sbjct: 81 GTIDFEEFLTMM 92
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 11/125 (8%)
Query: 34 NGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGDISLAEFIHYV---------KE 82
+G I +L K ++ G + Q+ ++ D + SG + EF+ + +
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGK 92
Query: 83 HEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNE 142
E+ L F DKN DG IDL+EL+ Q G I E++ ++L+K DK+ I ++E
Sbjct: 93 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 143 WRDFL 147
+ +F+
Sbjct: 153 FLEFM 157
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 98 QDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEWRDFLLYC 150
+DG I +EL K + LG + E ++++ +D+DGS + F+E+ ++ C
Sbjct: 32 EDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRC 84
Score = 30.0 bits (66), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 19 EERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSDSNRSGDISLAEF 76
EE L LF D + +G ID+ +L L+ G + ++ ++ D N G I EF
Sbjct: 94 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 153
Query: 77 IHYVK 81
+ ++K
Sbjct: 154 LEFMK 158
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 17/140 (12%)
Query: 14 LPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERS-------DSN 66
P + ++ L F A+ +G+ID +L + L G+ Y LE D +
Sbjct: 27 FPGQTQDPLYGYFAAVAGQ-DGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRD 85
Query: 67 RSGDISLAEFIHYVKEHEKHL---RLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEA 123
SG + EF KE L R F LD ++ G +D QELQKA +G +
Sbjct: 86 MSGTMGFNEF----KELWAVLNGWRQHFISLDTDRSGTVDPQELQKALTTMGFRLSPQAV 141
Query: 124 KKLLKRMDKDGSLEISFNEW 143
+ KR +G +I+F+++
Sbjct: 142 NSIAKRYSTNG--KITFDDY 159
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L + G + A Q + D++ +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGT 62
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I+ EF+ + E+ +R F DK+ +G I EL+ LG + + E
Sbjct: 63 INFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVD 122
Query: 125 KLLKRMDKDGSLEISFNEW 143
+ ++ D DG ++++ E+
Sbjct: 123 EXIREADIDGDGQVNYEEF 141
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 80 VKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEIS 139
+E + FS DK+ DG I +EL + LG + E E + + +D DG+ I+
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTIN 64
Query: 140 FNEWRDFLLYC 150
F E+ C
Sbjct: 65 FPEFLTXXARC 75
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 26 FVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGDISLAEFIHYV--- 80
F D DG+G I + +L+ ++ + Q + D++ +G I EF+ +
Sbjct: 16 FGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAKK 75
Query: 81 ---KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLE 137
+ E+ L+ F DK+Q+G I EL+ LG + + E ++++K D DG +
Sbjct: 76 VKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQ 135
Query: 138 ISFNEWRDFLLYC 150
+++ E+ ++
Sbjct: 136 VNYEEFVKMMMTV 148
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 11/129 (8%)
Query: 26 FVALDTDGNGKIDIHDLSKALKDFGVHSLYAQ--KFLERSDSNRSGDISLAEF----IHY 79
F D DG G I +L ++ G + + +E D + SG I EF +
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85
Query: 80 VKE-----HEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDG 134
+KE E+ L F DKN DG ID++EL + + G + E + + L+K DK+
Sbjct: 86 MKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNN 145
Query: 135 SLEISFNEW 143
I F+E+
Sbjct: 146 DGRIDFDEF 154
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 7/125 (5%)
Query: 26 FVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGDISLAEFIHYVKEH 83
F D DG+G I +L ++ G + A Q + D++ +G I EF+ +
Sbjct: 12 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 71
Query: 84 EK-----HLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEI 138
K +R F DK+ +G I EL+ LG + + E ++++ + DG ++
Sbjct: 72 MKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQV 131
Query: 139 SFNEW 143
++ E+
Sbjct: 132 NYEEF 136
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 80 VKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEIS 139
+E + FS DK+ DG I +EL + LG + E E + ++ +D DG+ I
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 140 FNEW 143
F E+
Sbjct: 61 FPEF 64
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 8 AMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSDS 65
M+ K+ D E + + F D DGNG I +L + + G + + + ++
Sbjct: 66 TMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANI 125
Query: 66 NRSGDISLAEFIHYV 80
+ G ++ EF+ +
Sbjct: 126 DGDGQVNYEEFVQMM 140
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 11/125 (8%)
Query: 34 NGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGDISLAEFIHYV---------KE 82
+G I +L K ++ G + Q+ ++ D + SG + EF+ + +
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 83 HEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNE 142
E+ L F DKN DG IDL EL+ Q G I E++ ++L+K DK+ I ++E
Sbjct: 93 SEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 143 WRDFL 147
+ +F+
Sbjct: 153 FLEFM 157
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 19 EERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSDSNRSGDISLAEF 76
EE L LF D + +G ID+ +L L+ G + ++ ++ D N G I EF
Sbjct: 94 EEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 153
Query: 77 IHYVK 81
+ ++K
Sbjct: 154 LEFMK 158
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 11/125 (8%)
Query: 34 NGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGDISLAEFIHYV---------KE 82
+G I +L K ++ G + Q+ ++ D + SG + EF+ + +
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 83 HEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNE 142
E+ L F DKN DG IDL EL+ Q G I E++ ++L+K DK+ I ++E
Sbjct: 93 SEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 143 WRDFL 147
+ +F+
Sbjct: 153 FLEFM 157
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 19 EERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSDSNRSGDISLAEF 76
EE L LF D + +G ID+ +L L+ G + ++ ++ D N G I EF
Sbjct: 94 EEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 153
Query: 77 IHYVK 81
+ ++K
Sbjct: 154 LEFMK 158
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 17/140 (12%)
Query: 14 LPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERS-------DSN 66
P + ++ L F A+ +G+ID +L + L G+ Y LE D +
Sbjct: 27 FPGQTQDPLYGYFAAVAGQ-DGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRD 85
Query: 67 RSGDISLAEFIHYVKEHEKHL---RLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEA 123
SG + EF KE L R F D ++ G +D QELQKA +G +
Sbjct: 86 MSGTMGFNEF----KELWAVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAV 141
Query: 124 KKLLKRMDKDGSLEISFNEW 143
+ KR +G +I+F+++
Sbjct: 142 NSIAKRYSTNG--KITFDDY 159
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Query: 20 ERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERSDSNRSGDISLAEF--- 76
+++++ F D D +GK+ I +L AL+ G + A+ + N + + LA F
Sbjct: 5 DQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLN-AKEFDLATFKTV 63
Query: 77 ----IHYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDK 132
I E K + F LDK +G I EL++ LG + +E ++L+K +
Sbjct: 64 YRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSV 123
Query: 133 DGSLEISFNEWRDFLL 148
G I++ + D L+
Sbjct: 124 SGDGAINYESFVDMLV 139
Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Query: 1 MLTLKCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQK 58
+ T K +K P E + + F ALD +GNG I +L + L + G + S ++
Sbjct: 57 LATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEE 116
Query: 59 FLERSDSNRSGDISLAEFI 77
++ + G I+ F+
Sbjct: 117 LMKEVSVSGDGAINYESFV 135
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 11/125 (8%)
Query: 34 NGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGDISLAEFIHYV---------KE 82
+G I +L K ++ G + Q+ ++ D + SG + EF+ + +
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 83 HEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNE 142
E+ L F DKN DG IDL EL+ Q G I E++ ++L+K DK+ I ++E
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 143 WRDFL 147
+F+
Sbjct: 153 XLEFM 157
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L + G + A Q + D++ +G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGT 63
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I EF+ + E+ +R F DK+ +G I EL+ LG + + E
Sbjct: 64 IDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVD 123
Query: 125 KLLKRMDKDGSLEISFNEW 143
+ ++ D DG ++++ E+
Sbjct: 124 QXIREADIDGDGQVNYEEF 142
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 8/139 (5%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L + G + A Q + D++ +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGT 62
Query: 71 ISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I EF+ + E+ +R F DK+ +G I EL+ LG + + E
Sbjct: 63 IDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVD 122
Query: 125 KLLKRMDKDGSLEISFNEW 143
+ ++ D DG ++++ E+
Sbjct: 123 EXIREADIDGDGQVNYEEF 141
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 18 DEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA-QKFLERSDSNRSGDISLAEF 76
D E+L+ F+ LD DG G I L K L+ G+ Y L++ DS+ SG I EF
Sbjct: 50 DVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDLLLDQIDSDGSGKIDYTEF 109
Query: 77 IHYVKEH----EKHLRLGFSHLDKNQDGKIDLQELQKAFQELG-----IDIDENEAKKLL 127
I + +K + F D + DG+I EL D N K+++
Sbjct: 110 IAAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMI 169
Query: 128 KRMDKDGSLEISFNEWRDFL 147
+ +DK+ +I F+E+ + +
Sbjct: 170 RDVDKNNDGKIDFHEFSEMM 189
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 11 KLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALK 47
K + Q D R++++ +D + +GKID H+ S+ +K
Sbjct: 154 KGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Query: 11 KLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERS--DSNRS 68
K +L +E ++ + + F D DG G ID+ +L A + G + S D +
Sbjct: 22 KPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGT 81
Query: 69 GDISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENE 122
G + +F+ K+ ++ + F D ++ GKI + L++ +ELG ++ + E
Sbjct: 82 GKXNFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEE 141
Query: 123 AKKLLKRMDKDGSLEISFNEW 143
++ + D+DG E+S E+
Sbjct: 142 LQEXIDEADRDGDGEVSEQEF 162
Score = 26.9 bits (58), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 20 ERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSDSNRSGDISLAEFI 77
E + K F D D GKI +L + K+ G + Q+ ++ +D + G++S EF+
Sbjct: 104 EEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADRDGDGEVSEQEFL 163
Query: 78 HYVK 81
K
Sbjct: 164 RIXK 167
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 14/142 (9%)
Query: 18 DEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKF---LERSDSNRSGDISLA 74
D ++L+ F+ LD +G G I L K L+ G+ + F L++ DS+ SG+I
Sbjct: 53 DVQKLKAAFLHLDEEGKGNITKLQLRKGLERSGL--MLPPNFDLLLDQIDSDGSGNIDYT 110
Query: 75 EFIHYVKEH----EKHLRLGFSHLDKNQDGKIDLQELQKAF---QELG--IDIDENEAKK 125
EF+ + +K + F D + DG+I EL + G + D N+ KK
Sbjct: 111 EFLAAAIDRRQLSKKLIYCAFRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQVKK 170
Query: 126 LLKRMDKDGSLEISFNEWRDFL 147
+++ +DK+G +I F E+ + +
Sbjct: 171 MIREVDKNGDGKIDFYEFSEMM 192
Score = 26.6 bits (57), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 14 LPQEDEERLEKLFVALDTDGNGKIDIHDLSKALK 47
+ + D +++K+ +D +G+GKID ++ S+ +K
Sbjct: 160 ITERDVNQVKKMIREVDKNGDGKIDFYEFSEMMK 193
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 91 FSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEWRDF 146
F D N DGKI EL A + LG + +E ++++ +D DG ISF+E+ DF
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDF 71
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 9 MLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFG-VHSLYAQKFLERSDSNR 67
M PQ+ +R E++F DT+G+GKI +L ALK G V ++ + D++
Sbjct: 1 MAAEDTPQDIADR-ERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDG 59
Query: 68 SGDISLAEFIHYVKEH 83
G IS EF + + +
Sbjct: 60 DGFISFDEFTDFARAN 75
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 91 FSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEWRDF 146
F D N DGKI EL +A + LG I +E K ++ +D DG ISF E+ DF
Sbjct: 15 FKRFDANGDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTDGDGFISFQEFTDF 69
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 15 PQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFG-VHSLYAQKFLERSDSNRSGDISL 73
PQ+ ER E++F D +G+GKI +L +ALK G + + + D++ G IS
Sbjct: 5 PQDKAER-ERIFKRFDANGDGKISAAELGEALKTLGSITPDEVKHMMAEIDTDGDGFISF 63
Query: 74 AEFIHYVKEHEKHLR 88
EF + + + L+
Sbjct: 64 QEFTDFGRANRGLLK 78
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 23/156 (14%)
Query: 13 KLPQEDEER-LEKLFVALDTDGNGKIDIHDLSKALK-------------DFGVHSLYAQK 58
KL +DE + L +F +D +G+G++D +L + K D +
Sbjct: 327 KLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQ 386
Query: 59 FLERSDSNRSGDISLAEFIHYVKEHE-----KHLRLGFSHLDKNQDGKIDLQELQKAFQE 113
L+ D +++G I +EF+ + + + L F D + GKI EL F
Sbjct: 387 VLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIF-- 444
Query: 114 LGI-DIDENEAKKLLKRMDKDGSLEISFNEWRDFLL 148
G+ D+D K +L +DK+ E+ F+E++ LL
Sbjct: 445 -GVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 479
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 19 EERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERS----DSNRSGDIS-- 72
E ++++ A+D D NG I+ + D +L +++ LER+ DS+ SG IS
Sbjct: 381 EHEVDQVLDAVDFDKNGYIEYSEFVTVAMD--RKTLLSRERLERAFRMFDSDNSGKISST 438
Query: 73 -LAEFIHYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQEL 114
LA + + S +DKN DG++D E Q+ +L
Sbjct: 439 ELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLKL 481
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 16/120 (13%)
Query: 34 NGKIDIHDLSKALKDFGVHSLYAQKFLERS-------DSNRSGDISLAEFIHYVKEHEKH 86
+G+ID +L + L G+ Y LE D + SG + EF KE
Sbjct: 15 DGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEF----KELWAV 70
Query: 87 L---RLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
L R F D ++ G +D QELQKA +G ++ + KR G +I+F+++
Sbjct: 71 LNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYSTSG--KITFDDY 128
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 90 GFSHLDKNQDGKIDLQELQKAFQELGI-----DIDENEAKKLLKRMDKDGSLEISFNEWR 144
G+ QDG+ID ELQ+ + GI + + ++ +D+D S + FNE++
Sbjct: 6 GYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFK 65
Query: 145 D 145
+
Sbjct: 66 E 66
Score = 27.3 bits (59), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 26 FVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSDSNRSGDISLAEFIHYVKEH 83
F++ D+D +G +D +L KAL G ++ +R + SG I+ ++I +
Sbjct: 78 FISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYST--SGKITFDDYIACCVKL 135
Query: 84 EKHLRLGFSHLDKNQDGKIDL 104
+ L F D Q G ++
Sbjct: 136 -RALTDSFRRRDSAQQGMVNF 155
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 91 FSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEWRDFLLYC 150
F D N DGKI L EL A + LG +E ++++ +D DG I FNE+ F
Sbjct: 8 FKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN 66
Query: 151 P 151
P
Sbjct: 67 P 67
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 22 LEKLFVALDTDGNGKIDIHDLSKALKDFGVHSL-YAQKFLERSDSNRSGDISLAEFIHYV 80
+E++F DT+G+GKI + +L+ AL+ G S Q+ + D++ G I EFI +
Sbjct: 4 MERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFISFC 63
Query: 81 KEHEKHLR 88
+ ++
Sbjct: 64 NANPGLMK 71
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 91 FSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEWRDFLLYC 150
F D N DGKI L EL A + LG +E ++++ +D DG I FNE+ F
Sbjct: 9 FKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN 67
Query: 151 P 151
P
Sbjct: 68 P 68
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 22 LEKLFVALDTDGNGKIDIHDLSKALKDFGVHSL-YAQKFLERSDSNRSGDISLAEFIHYV 80
+E++F DT+G+GKI + +L+ AL+ G S Q+ + D++ G I EFI +
Sbjct: 5 MERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFISFC 64
Query: 81 KEHEKHLR 88
+ ++
Sbjct: 65 NANPGLMK 72
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 23/156 (14%)
Query: 13 KLPQEDEER-LEKLFVALDTDGNGKIDIHDLSKALK-------------DFGVHSLYAQK 58
KL +DE + L +F +D +G+G++D +L + K D +
Sbjct: 351 KLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQ 410
Query: 59 FLERSDSNRSGDISLAEFIHYVKEHE-----KHLRLGFSHLDKNQDGKIDLQELQKAFQE 113
L+ D +++G I +EF+ + + + L F D + GKI EL F
Sbjct: 411 VLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIF-- 468
Query: 114 LGI-DIDENEAKKLLKRMDKDGSLEISFNEWRDFLL 148
G+ D+D K +L +DK+ E+ F+E++ LL
Sbjct: 469 -GVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 503
Score = 34.7 bits (78), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 19 EERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERS----DSNRSGDIS-- 72
E ++++ A+D D NG I+ + D +L +++ LER+ DS+ SG IS
Sbjct: 405 EHEVDQVLDAVDFDKNGYIEYSEFVTVAMD--RKTLLSRERLERAFRMFDSDNSGKISST 462
Query: 73 -LAEFIHYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQEL 114
LA + + S +DKN DG++D E Q+ +L
Sbjct: 463 ELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLKL 505
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 23/156 (14%)
Query: 13 KLPQEDEER-LEKLFVALDTDGNGKIDIHDLSKALK-------------DFGVHSLYAQK 58
KL +DE + L +F +D +G+G++D +L + K D +
Sbjct: 350 KLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQ 409
Query: 59 FLERSDSNRSGDISLAEFIHYVKEHE-----KHLRLGFSHLDKNQDGKIDLQELQKAFQE 113
L+ D +++G I +EF+ + + + L F D + GKI EL F
Sbjct: 410 VLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIF-- 467
Query: 114 LGI-DIDENEAKKLLKRMDKDGSLEISFNEWRDFLL 148
G+ D+D K +L +DK+ E+ F+E++ LL
Sbjct: 468 -GVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 502
Score = 34.7 bits (78), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 19 EERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERS----DSNRSGDIS-- 72
E ++++ A+D D NG I+ + D +L +++ LER+ DS+ SG IS
Sbjct: 404 EHEVDQVLDAVDFDKNGYIEYSEFVTVAMD--RKTLLSRERLERAFRMFDSDNSGKISST 461
Query: 73 -LAEFIHYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQEL 114
LA + + S +DKN DG++D E Q+ +L
Sbjct: 462 ELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLKL 504
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQ--KFLERSDSNRSGD 70
L +E ++ F D D NG I +L+ ++ G+ A+ + D + +
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 71 ISLAEFIHYVK------EHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAK 124
I +EF+ + + E+ L F DKN DG I EL+ +G + + E
Sbjct: 63 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVD 122
Query: 125 KLLKRMDKDGSLEISFNEWRDFL 147
+L+ + DGS EI+ ++ L
Sbjct: 123 DMLREV-SDGSGEINIQQFAALL 144
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 40/64 (62%)
Query: 80 VKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEIS 139
+E ++ +R F D + G ID++EL+ A + LG + + E KK++ +DK+G+ +++
Sbjct: 26 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 85
Query: 140 FNEW 143
F ++
Sbjct: 86 FGDF 89
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 11 KLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQ--KFLERSDSNRS 68
K +L +E ++ + + F D DG G ID+ +L A++ G + K + D +
Sbjct: 22 KPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGT 81
Query: 69 GDISLAEFIHYVKE 82
G ++ +F+ + +
Sbjct: 82 GKMNFGDFLTVMTQ 95
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 14/142 (9%)
Query: 15 PQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQ--KFLERSDSNRSGDIS 72
P+E EE L + F D D +G I+ DL ++ G + + ++ + N G +
Sbjct: 21 PEEIEE-LREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVD 79
Query: 73 LAEFIHYVKEH----------EKHLRLGFSHLDKNQDGKIDLQELQKAFQE-LGIDIDEN 121
+F+ + K LR F D N DG+I EL++A ++ LG +
Sbjct: 80 FDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHR 139
Query: 122 EAKKLLKRMDKDGSLEISFNEW 143
+ +++++ +D +G + F E+
Sbjct: 140 DIEEIIRDVDLNGDGRVDFEEF 161
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 22/157 (14%)
Query: 13 KLPQEDEER-LEKLFVALDTDGNGKIDIHDLSKALKDF----GV--HSLYAQK------- 58
KL DE + L ++F LDT+ +G +D +L + +F GV +SL +
Sbjct: 323 KLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQ 382
Query: 59 ---FLERSDSNRSGDISLAEFIHYVKEH-----EKHLRLGFSHLDKNQDGKIDLQELQKA 110
+ D + SG I +EFI + + + F DK+ GKI +EL K
Sbjct: 383 IDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKL 442
Query: 111 FQELGIDIDENEAKKLLKRMDKDGSLEISFNEWRDFL 147
F + I E + +++++D + E+ FNE+ + L
Sbjct: 443 FSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEML 479
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 20 ERLEKLFVALDTDGNGKIDIHDLSKALK--DFGVHSLYAQKFLERSDSNRSGDISLAEFI 77
ER+E+ F D DG+GKI +L K D + + +E+ D+N+ G++ EF+
Sbjct: 417 ERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFV 476
Query: 78 HYVK 81
++
Sbjct: 477 EMLQ 480
Score = 34.3 bits (77), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 19 EERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERS----DSNRSGDISLA 74
E++++ L LD DG+G I+ + + D + L +++ +ER+ D + SG IS
Sbjct: 380 EDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTI--LLSRERMERAFKMFDKDGSGKISTK 437
Query: 75 EFIHYVKEHEKHLRLG-----FSHLDKNQDGKIDLQELQKAFQ 112
E + + +++ +D N+DG++D E + Q
Sbjct: 438 ELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQ 480
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 9/142 (6%)
Query: 14 LPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQ--KFLERSDSNRSGDI 71
L +E ++ F D D NG I +L+ ++ G+ A+ + D + + I
Sbjct: 5 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 64
Query: 72 SLAEFIHYVK------EHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKK 125
+EF+ + + E+ L F DKN DG I EL+ +G + + E
Sbjct: 65 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDD 124
Query: 126 LLKRMDKDGSLEISFNEWRDFL 147
+L+ + DGS EI+ ++ L
Sbjct: 125 MLREV-SDGSGEINIQQFAALL 145
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 14/142 (9%)
Query: 15 PQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQ--KFLERSDSNRSGDIS 72
P+E EE L + F D D +G I+ DL ++ G + + ++ + N G +
Sbjct: 7 PEEIEE-LREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVD 65
Query: 73 LAEFIHYVKEH----------EKHLRLGFSHLDKNQDGKIDLQELQKAFQE-LGIDIDEN 121
+F+ + K LR F D N DG+I EL++A ++ LG +
Sbjct: 66 FDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHR 125
Query: 122 EAKKLLKRMDKDGSLEISFNEW 143
+ +++++ +D +G + F E+
Sbjct: 126 DIEEIIRDVDLNGDGRVDFEEF 147
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 15 PQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQ--KFLERSDSNRSGDIS 72
P+E EE L + F D D +G I+ DL ++ G + + ++ + N G +
Sbjct: 7 PEEIEE-LREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVD 65
Query: 73 LAEFIHYVKEH----------EKHLRLGFSHLDKNQDGKIDLQELQKAFQE-LGIDIDEN 121
+F+ + K LR F D N DG+I EL++A + LG +
Sbjct: 66 FDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHR 125
Query: 122 EAKKLLKRMDKDGSLEISFNEW 143
+ +++++ +D +G + F E+
Sbjct: 126 DIEEIIRDVDLNGDGRVDFEEF 147
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 81 KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISF 140
+E ++ ++ F D N+ G ID EL+ A + LG D+ + E +L+ D++G+ I F
Sbjct: 3 EEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGF 62
Query: 141 NEWRDFL 147
+++ D +
Sbjct: 63 DDFLDIM 69
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 14 LPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSDSNRSGDI 71
L +E ++ +++ F DT+ G ID H+L A++ G V + + D +G I
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60
Query: 72 SLAEFIHYVKEHEKH 86
+F+ + E K+
Sbjct: 61 GFDDFLDIMTEKIKN 75
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 69/135 (51%), Gaps = 13/135 (9%)
Query: 20 ERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERSDSNRSGDISLAEFIHY 79
+RL K F LD D +G + + + +L + + L Q+ ++ D++ +G++ EFI
Sbjct: 20 KRLGKRFKKLDLDNSGSLSVEEFM-SLPELQQNPL-VQRVIDIFDTDGNGEVDFKEFIEG 77
Query: 80 VKE------HEKHLRLGFSHLDKNQDGKIDLQELQKAFQEL-GIDIDENEAKKLLKRM-- 130
V + E+ LR F D ++DG I EL + + + G ++ + + ++++ +
Sbjct: 78 VSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTII 137
Query: 131 --DKDGSLEISFNEW 143
DKDG ISF E+
Sbjct: 138 NADKDGDGRISFEEF 152
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 69/135 (51%), Gaps = 13/135 (9%)
Query: 20 ERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERSDSNRSGDISLAEFIHY 79
+RL K F LD D +G + + + +L + + L Q+ ++ D++ +G++ EFI
Sbjct: 21 KRLGKRFKKLDLDNSGSLSVEEFM-SLPELQQNPL-VQRVIDIFDTDGNGEVDFKEFIEG 78
Query: 80 VKE------HEKHLRLGFSHLDKNQDGKIDLQELQKAFQEL-GIDIDENEAKKLLKRM-- 130
V + E+ LR F D ++DG I EL + + + G ++ + + ++++ +
Sbjct: 79 VSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTII 138
Query: 131 --DKDGSLEISFNEW 143
DKDG ISF E+
Sbjct: 139 NADKDGDGRISFEEF 153
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 69/135 (51%), Gaps = 13/135 (9%)
Query: 20 ERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERSDSNRSGDISLAEFIHY 79
+RL K F LD D +G + + + +L + + L Q+ ++ D++ +G++ EFI
Sbjct: 6 KRLGKRFKKLDLDNSGSLSVEEFM-SLPELQQNPL-VQRVIDIFDTDGNGEVDFKEFIEG 63
Query: 80 VKE------HEKHLRLGFSHLDKNQDGKIDLQELQKAFQEL-GIDIDENEAKKLLKRM-- 130
V + E+ LR F D ++DG I EL + + + G ++ + + ++++ +
Sbjct: 64 VSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTII 123
Query: 131 --DKDGSLEISFNEW 143
DKDG ISF E+
Sbjct: 124 NADKDGDGRISFEEF 138
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 91 FSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEWRDFL 147
F DKN DG IDL+EL+ Q G I E++ ++L+K DK+ I ++E+ +F+
Sbjct: 21 FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 77
Score = 30.0 bits (66), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 19 EERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSDSNRSGDISLAEF 76
EE L LF D + +G ID+ +L L+ G + ++ ++ D N G I EF
Sbjct: 14 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 73
Query: 77 IHYVK 81
+ ++K
Sbjct: 74 LEFMK 78
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Query: 10 LKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERSDSNRSG 69
L +L +E ++ + + F D + +G +D H+L A+K G L ++ L+ D S
Sbjct: 13 LNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFE-LPKREILDLIDEYDSE 71
Query: 70 DISLAEFI-HYVKEHEK--------HLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDE 120
L ++ Y+ EK ++ F D + GKI ++ L++ +ELG + +
Sbjct: 72 GRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTD 131
Query: 121 NEAKKLLKRMDKDGSLEISFNEWRDFLLYC 150
E + +++ D DG EI+ NE F+ C
Sbjct: 132 EELRAMIEEFDLDGDGEINENE---FIAIC 158
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 69/135 (51%), Gaps = 13/135 (9%)
Query: 20 ERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERSDSNRSGDISLAEFIHY 79
+RL K F LD D +G + + + +L + + L Q+ ++ D++ +G++ EFI
Sbjct: 7 KRLGKRFKKLDLDNSGSLSVEEFM-SLPELQQNPL-VQRVIDIFDTDGNGEVDFKEFIEG 64
Query: 80 VKE------HEKHLRLGFSHLDKNQDGKIDLQELQKAFQEL-GIDIDENEAKKLLKRM-- 130
V + E+ LR F D ++DG I EL + + + G ++ + + ++++ +
Sbjct: 65 VSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTII 124
Query: 131 --DKDGSLEISFNEW 143
DKDG ISF E+
Sbjct: 125 NADKDGDGRISFEEF 139
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 91 FSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEWRDFL 147
F DKN DG IDL+EL+ Q G I E++ ++L+K DK+ I ++E+ +F+
Sbjct: 13 FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 69
Score = 29.6 bits (65), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 19 EERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSDSNRSGDISLAEF 76
EE L LF D + +G ID+ +L L+ G + ++ ++ D N G I EF
Sbjct: 6 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 65
Query: 77 IHYVK 81
+ ++K
Sbjct: 66 LEFMK 70
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 23/156 (14%)
Query: 13 KLPQEDEER-LEKLFVALDTDGNGKIDIHDLSKALK-------------DFGVHSLYAQK 58
KL +DE + L +F D +G+G++D +L + K D +
Sbjct: 327 KLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQ 386
Query: 59 FLERSDSNRSGDISLAEFIHYVKEHE-----KHLRLGFSHLDKNQDGKIDLQELQKAFQE 113
L+ D +++G I +EF+ + + + L F D + GKI EL F
Sbjct: 387 VLDAVDFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATIF-- 444
Query: 114 LGI-DIDENEAKKLLKRMDKDGSLEISFNEWRDFLL 148
G+ D+D K +L +DK+ E+ F+E++ LL
Sbjct: 445 -GVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQXLL 479
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 19 EERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERS----DSNRSGDIS-- 72
E ++++ A+D D NG I+ + D +L +++ LER+ DS+ SG IS
Sbjct: 381 EHEVDQVLDAVDFDKNGYIEYSEFVTVAXD--RKTLLSRERLERAFRXFDSDNSGKISST 438
Query: 73 -LAEFIHYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQEL 114
LA + + S +DKN DG++D E Q+ +L
Sbjct: 439 ELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQXLLKL 481
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 91 FSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEWRDFL 147
F DKN DG IDL+EL+ Q G I E++ ++L+K DK+ I ++E+ +F+
Sbjct: 11 FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 67
Score = 29.6 bits (65), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 19 EERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSDSNRSGDISLAEF 76
EE L LF D + +G ID+ +L L+ G + ++ ++ D N G I EF
Sbjct: 4 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 63
Query: 77 IHYVK 81
+ ++K
Sbjct: 64 LEFMK 68
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 66/151 (43%), Gaps = 8/151 (5%)
Query: 1 MLTLKCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QK 58
+L K E + +L +E ++ F D DG+G I L ++ G + A Q
Sbjct: 292 ILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQD 351
Query: 59 FLERSDSNRSGDISLAEFIHYV------KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQ 112
+ ++ +G I +F+ + + E+ +R F K+ +G I +L+
Sbjct: 352 MINEVGADGNGTIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMT 411
Query: 113 ELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
LG + + E ++++ DG ++++ ++
Sbjct: 412 NLGEKLTDEEVDEMIREAGIDGDGQVNYEQF 442
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 91 FSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEWRDFL 147
F DKN DG IDL+EL+ Q G I E++ ++L+K DK+ I ++E+ +F+
Sbjct: 16 FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 72
Score = 29.6 bits (65), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 19 EERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSDSNRSGDISLAEF 76
EE L LF D + +G ID+ +L L+ G + ++ ++ D N G I EF
Sbjct: 9 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 68
Query: 77 IHYVK 81
+ ++K
Sbjct: 69 LEFMK 73
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 10/137 (7%)
Query: 22 LEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERSDSNRSGDISLAEFI---- 77
+ +LF LDT+ NG + ++ L G+ + L+ D N G+I+ EF+
Sbjct: 41 INELFYKLDTNHNGSLSHREIYTVLASVGIKKWDINRILQALDINDRGNITYTEFMAGCY 100
Query: 78 HYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSL- 136
+ L+ F+ +DK++DG I ++ + +D ++ + L K G
Sbjct: 101 RWKNIESTFLKAAFNKIDKDEDGYISKSDIVSLVHDKVLDNNDIDNFFLSVHSIKKGIPR 160
Query: 137 -----EISFNEWRDFLL 148
+ISF E++D++L
Sbjct: 161 EHIINKISFQEFKDYML 177
Score = 26.6 bits (57), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/87 (18%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 57 QKFLERSDSNRSGDISLAEFIHYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGI 116
+ +++ S+ +A + + H K++ F LD N +G + +E+ +G
Sbjct: 11 KSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVG- 69
Query: 117 DIDENEAKKLLKRMDKDGSLEISFNEW 143
I + + ++L+ +D + I++ E+
Sbjct: 70 -IKKWDINRILQALDINDRGNITYTEF 95
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 91 FSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEWRDFL 147
F DKN DG IDL EL+ Q G I E++ ++L+K DK+ I ++E+ +F+
Sbjct: 12 FRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 68
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 19 EERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSDSNRSGDISLAEF 76
EE L LF D + +G ID+ +L L+ G + ++ ++ D N G I EF
Sbjct: 5 EEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 64
Query: 77 IHYVK 81
+ ++K
Sbjct: 65 LEFMK 69
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 80 VKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEIS 139
+E + FS DK+ DG I +EL + LG++ E E + ++ +D DG+ I
Sbjct: 5 TEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTID 64
Query: 140 FNEW 143
F E+
Sbjct: 65 FPEF 68
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G++ A Q + D++ +G
Sbjct: 3 QLTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGT 62
Query: 71 ISLAEFIHYVKEHEKH 86
I EF+ + K+
Sbjct: 63 IDFPEFLTMMARIMKY 78
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 17 EDEERLEKLFVALDTDGNGKIDIHDL-----------SKALKDFGVHSLYAQ--KFLERS 63
E+ + L ++F LD +G+G++D +L + D + A+ L+
Sbjct: 311 EETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSV 370
Query: 64 DSNRSGDISLAEFIHYVKEHE-----KHLRLGFSHLDKNQDGKIDLQELQKAFQELGI-D 117
D +R+G I +EF+ + + + L F D + GKI +EL + F G+ +
Sbjct: 371 DFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLF---GVTE 427
Query: 118 IDENEAKKLLKRMDKDGSLEISFNEWRDFL 147
+D+ ++L+ DK+ E+ F E+ + +
Sbjct: 428 VDDETWHQVLQECDKNNDGEVDFEEFVEMM 457
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 20 ERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERSDSNRSGDISLAEFIHY 79
ERL F D+DG+GKI +L + V + L+ D N G++ EF+
Sbjct: 397 ERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEM 456
Query: 80 VKE 82
+++
Sbjct: 457 MQK 459
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%)
Query: 78 HYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLE 137
+ +E + F+ DK+ +G I EL + LG+ E E L+ +D DG+ +
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 138 ISFNEW 143
I F+E+
Sbjct: 63 IEFSEF 68
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 17 EDEERLEKLFVALDTDGNGKIDIHDL-----------SKALKDFGVHSLYAQ--KFLERS 63
E+ + L ++F LD +G+G++D +L + D + A+ L+
Sbjct: 37 EETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSV 96
Query: 64 DSNRSGDISLAEFIHYVKEHE-----KHLRLGFSHLDKNQDGKIDLQELQKAFQELGI-D 117
D +R+G I +EF+ + + + L F D + GKI +EL + F G+ +
Sbjct: 97 DFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLF---GVTE 153
Query: 118 IDENEAKKLLKRMDKDGSLEISFNEWRDFL 147
+D+ ++L+ DK+ E+ F E+ + +
Sbjct: 154 VDDETWHQVLQECDKNNDGEVDFEEFVEMM 183
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 20 ERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERSDSNRSGDISLAEFIHY 79
ERL F D+DG+GKI +L + V + L+ D N G++ EF+
Sbjct: 123 ERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEM 182
Query: 80 VK 81
++
Sbjct: 183 MQ 184
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 85 KHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEWR 144
+ +R F D++ +G I QEL A + LG +E E + +++R+D DG ++ F E+
Sbjct: 36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFV 95
Query: 145 DFL 147
L
Sbjct: 96 TLL 98
Score = 33.9 bits (76), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 11 KLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGV--HSLYAQKFLERSDSNRS 68
+ +P+++ E + + F D DGNG I +L A++ G + + + ++R D +
Sbjct: 27 PVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGD 86
Query: 69 GDISLAEFI 77
G + EF+
Sbjct: 87 GQVDFEEFV 95
>pdb|3AKB|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 31/155 (20%)
Query: 17 EDEERLEKLFVALDTDGNGKIDIHDLSKA----LKDFGV-------HSLYA------QKF 59
E E R+ F D DGNG ID D S A L +FGV +LY Q
Sbjct: 1 EYERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGL 60
Query: 60 LERSDSNRSGDISLAEFI------------HYVKEHEKHLRLGFSHLDKNQDGKIDLQEL 107
+D + I+ EF+ + + L D + DG + + +
Sbjct: 61 AGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADT 120
Query: 108 QKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNE 142
+A G + E+ A++ +D DG ++ E
Sbjct: 121 ARALTAFG--VPEDLARQAAAALDTDGDGKVGETE 153
Score = 33.1 bits (74), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 30 DTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERSDSNRSGDISLAEFI 77
DTDG+G + + D ++AL FGV A++ D++ G + E +
Sbjct: 108 DTDGDGAVTVADTARALTAFGVPEDLARQAAAALDTDGDGKVGETEIV 155
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 91 FSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEWRDFL--L 148
F LD++ +D E ++ +LG+ +D+ EA+ + ++ D++GS + E FL L
Sbjct: 43 FRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEE---FLRAL 99
Query: 149 YCPFSDIREQNVSA 162
P S RE ++A
Sbjct: 100 RPPMSQAREAVIAA 113
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 10 LKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERSDSNRSG 69
L +L +E ++ + + F D + +G +D H+L A K G L ++ L+ D S
Sbjct: 13 LNSELLEEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFE-LPKREILDLIDEYDSE 71
Query: 70 DISLAEFI-HYVKEHEK--------HLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDE 120
L ++ Y+ EK ++ F D + GKI ++ L++ +ELG + +
Sbjct: 72 GRHLXKYDDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTD 131
Query: 121 NEAKKLLKRMDKDGSLEISFNEWRDFLLYC 150
E + ++ D DG EI+ NE F+ C
Sbjct: 132 EELRAXIEEFDLDGDGEINENE---FIAIC 158
>pdb|3AKA|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 31/155 (20%)
Query: 17 EDEERLEKLFVALDTDGNGKIDIHDLSKA----LKDFGV-------HSLYA------QKF 59
E E R+ F D DGNG ID D S A L +FGV +LY Q
Sbjct: 1 EYERRIAARFTTFDQDGNGHIDRSDFSGAAKALLAEFGVAARSDRGQALYGGAEALWQGL 60
Query: 60 LERSDSNRSGDISLAEFI------------HYVKEHEKHLRLGFSHLDKNQDGKIDLQEL 107
+D + I+ EF+ + + L D + DG + + +
Sbjct: 61 AGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEIARPFLHAALGVADTDGDGAVTVADT 120
Query: 108 QKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNE 142
+A G + E+ A++ +D DG ++ E
Sbjct: 121 ARALTAFG--VPEDLARQAAAALDTDGDGKVGETE 153
Score = 33.1 bits (74), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 30 DTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERSDSNRSGDISLAEFI 77
DTDG+G + + D ++AL FGV A++ D++ G + E +
Sbjct: 108 DTDGDGAVTVADTARALTAFGVPEDLARQAAAALDTDGDGKVGETEIV 155
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%)
Query: 78 HYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLE 137
+ +E + F+ DK+ +G I EL + LG+ E E L+ +D DG+ +
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 138 ISFNEW 143
I F+E+
Sbjct: 63 IEFSEF 68
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 8/111 (7%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQ--KFLERSDSNRSGD 70
L +E ++ F D D NG I +L+ ++ G+ A+ + D + +
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 71 ISLAEFIHYVK------EHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELG 115
I +EF+ + + E+ L F DKN DG I EL+ +G
Sbjct: 63 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG 113
>pdb|1IJ5|A Chain A, Metal-Free Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
pdb|1IJ6|A Chain A, Ca2+-Bound Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
Length = 323
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 4/135 (2%)
Query: 11 KLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSDSNRS 68
K L +ED L +LF++ G+GK DL + L + + +K +++
Sbjct: 113 KPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTK 172
Query: 69 GDISLAEFIHYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLK 128
G +S + V L F +D N +G + +E ++ F LG D ++ L +
Sbjct: 173 GRMSYITLVA-VANDLAALVADFRKIDTNSNGTLSRKEFREHFVRLGFD-KKSVQDALFR 230
Query: 129 RMDKDGSLEISFNEW 143
D+D S ++ F+E+
Sbjct: 231 YADEDESDDVGFSEY 245
Score = 30.0 bits (66), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 17/127 (13%)
Query: 26 FVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLER-SDSNRSGDISLAEFIHY----- 79
F +DT+ NG + + + G Q L R +D + S D+ +E++H
Sbjct: 194 FRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLL 253
Query: 80 VKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKL---LKRMDKDGSL 136
V LR+ ++ D ++ G++ +E+QK ++ I E+ KK +D D S
Sbjct: 254 V------LRILYAFADFDKSGQLSKEEVQKVLED--AHIPESARKKFEHQFSVVDVDDSK 305
Query: 137 EISFNEW 143
+S+ E+
Sbjct: 306 SLSYQEF 312
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 78 HYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLE 137
+E + FS DK+ DG I +EL + LG + E E + ++ +D DG+
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 138 ISFNEW 143
I F E+
Sbjct: 63 IDFPEF 68
Score = 30.0 bits (66), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 71 ISLAEFIHYV 80
I EF+ +
Sbjct: 63 IDFPEFLTMM 72
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 78 HYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLE 137
+E + FS DK+ DG I +EL + LG + E E + ++ +D DG+
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 138 ISFNEW 143
I F E+
Sbjct: 63 IDFPEF 68
Score = 30.0 bits (66), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 71 ISLAEFIHYV 80
I EF+ +
Sbjct: 63 IDFPEFLTMM 72
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 78 HYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLE 137
+E + FS DK+ DG I +EL + LG + E E + ++ +D DG+
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 138 ISFNEW 143
I F E+
Sbjct: 64 IDFPEF 69
Score = 30.0 bits (66), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 71 ISLAEFIHYV 80
I EF+ +
Sbjct: 64 IDFPEFLTMM 73
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 78 HYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLE 137
+E + FS DK+ DG I +EL + LG + E E + ++ +D DG+
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 138 ISFNEW 143
I F E+
Sbjct: 63 IDFPEF 68
Score = 30.4 bits (67), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 71 ISLAEFIHYV 80
I EF+ +
Sbjct: 63 IDFPEFLTMM 72
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 78 HYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLE 137
+E + FS DK+ DG I +EL + LG + E E + ++ +D DG+
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 138 ISFNEW 143
I F E+
Sbjct: 63 IDFPEF 68
Score = 30.0 bits (66), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 71 ISLAEFIHYV 80
I EF+ +
Sbjct: 63 IDFPEFLTMM 72
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 70 DISLAEFIHYVKEHEKHLRLGFS-HLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLK 128
DI A +E + + F + +DG I +EL K + LG + E ++++
Sbjct: 3 DIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMID 62
Query: 129 RMDKDGSLEISFNEWRDFLLYC 150
+D+DGS + F+EW ++ C
Sbjct: 63 EVDEDGSGTVDFDEWLVMMVRC 84
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 78 HYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLE 137
+E + FS DK+ DG I +EL + LG + E E + ++ +D DG+
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 138 ISFNEW 143
I F E+
Sbjct: 63 IDFPEF 68
Score = 30.0 bits (66), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 71 ISLAEFIHYV 80
I EF+ +
Sbjct: 63 IDFPEFLTMM 72
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 78 HYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLE 137
+E + FS DK+ DG I +EL + LG + E E + ++ +D DG+
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 138 ISFNEW 143
I F E+
Sbjct: 63 IDFPEF 68
Score = 30.0 bits (66), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 71 ISLAEFIHYV 80
I EF+ +
Sbjct: 63 IDFPEFLTMM 72
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%)
Query: 78 HYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLE 137
+ +E + F+ DK+ G I EL + LG+ E E L+ +D DG+
Sbjct: 4 NLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHA 63
Query: 138 ISFNEW 143
I F+E+
Sbjct: 64 IEFSEF 69
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 78 HYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLE 137
+E + FS DK+ DG I +EL + LG + E E + ++ +D DG+
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 138 ISFNEW 143
I F E+
Sbjct: 63 IDFPEF 68
Score = 30.0 bits (66), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 71 ISLAEFIHYV------KEHEKHLRLGF 91
I EF+ + + E+ +R F
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAF 89
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%)
Query: 78 HYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLE 137
+E + FS DK+ DG I +EL + LG + E E + ++ +D DG
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGT 62
Query: 138 ISFNEW 143
I F E+
Sbjct: 63 IDFPEF 68
Score = 29.3 bits (64), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L +E ++ F D DG+G I +L ++ G + A Q + D++ G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGT 62
Query: 71 ISLAEFIHYV 80
I EF+ +
Sbjct: 63 IDFPEFLTMM 72
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 20 ERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLER---SDSNRSGDISLAEF 76
++LE F D DGNGKI + +L+ FG+ L ++ + E DSN GD+ EF
Sbjct: 143 DKLESAFQKFDQDGNGKISVDELASV---FGLDHLESKTWKEMISGIDSNNDGDVDFEEF 199
Query: 77 IHYVK 81
++
Sbjct: 200 CKMIQ 204
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 67/144 (46%), Gaps = 19/144 (13%)
Query: 16 QEDEERLEKLFVALDTDGNGKIDIHDL----SK------ALKDFGVHSLYAQKFLERSDS 65
QE+ + L +F +D +G+G++D +L SK A+ D L +D
Sbjct: 59 QEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADF 118
Query: 66 NRSGDISLAEFIHYVKEHEK-----HLRLGFSHLDKNQDGKIDLQELQKAFQELGID-ID 119
+R+G I +EF+ + + L F D++ +GKI + EL F G+D ++
Sbjct: 119 DRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVF---GLDHLE 175
Query: 120 ENEAKKLLKRMDKDGSLEISFNEW 143
K+++ +D + ++ F E+
Sbjct: 176 SKTWKEMISGIDSNNDGDVDFEEF 199
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 4 LKCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERS 63
L E + LPQ + E ++ + A D D NG ID + D SL ++ LE +
Sbjct: 92 LSGEEVAVFDLPQIESE-VDAILGAADFDRNGYIDYSEFVTVAMD--RKSLLSKDKLESA 148
Query: 64 ----DSNRSGDISLAEFIH-YVKEH--EKHLRLGFSHLDKNQDGKIDLQELQKAFQEL 114
D + +G IS+ E + +H K + S +D N DG +D +E K Q+L
Sbjct: 149 FQKFDQDGNGKISVDELASVFGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKL 206
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 70 DISLAEFIHYVKEHEKHLRLGFS-HLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLK 128
DI A +E + + F + +DG I +EL K + LG + E ++++
Sbjct: 3 DIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMID 62
Query: 129 RMDKDGSLEISFNEWRDFLLYC 150
+D+DGS + F+EW + C
Sbjct: 63 EVDEDGSGTVDFDEWLVMMARC 84
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%)
Query: 78 HYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLE 137
H + E+ L+ F DK+Q+G I EL+ LG + + E ++++K D DG +
Sbjct: 2 HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQ 61
Query: 138 ISFNEWRDFLLYC 150
+++ E+ ++
Sbjct: 62 VNYEEFVKMMMTV 74
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 78 HYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLE 137
E + FS DK+ DG I +EL + LG + E E + ++ +D DG+
Sbjct: 3 QLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 138 ISFNEWRDFL 147
I F E+ + +
Sbjct: 63 IDFPEFLNLM 72
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGD 70
+L E ++ F D DG+G I +L ++ G + A Q + D++ +G
Sbjct: 3 QLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 71 ISLAEFIHYV 80
I EF++ +
Sbjct: 63 IDFPEFLNLM 72
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 18/114 (15%)
Query: 6 CEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSK---ALKD-------FGVHSLY 55
+A + K P ++E+ L+ +F A+D DGNG+ID+ + +K A+K+ G+ LY
Sbjct: 22 VKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAAVKEQDLSDEKVGLKILY 81
Query: 56 AQKFLERSDSNRSGDISLAEFIHYVKE--HEKHLRLGFSHLDKNQDGKIDLQEL 107
+ D++ G ++ E + K+ +EK + D N DG I L+E
Sbjct: 82 -----KLMDADGDGKLTKEEVTTFFKKFGYEKVVDQ-IMKADANGDGYITLEEF 129
Score = 34.3 bits (77), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 22 LEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERSDSNRSGDISLAEFIHY 79
L+ L+ +D DG+GK+ +++ K FG + Q + ++D+N G I+L EF+ +
Sbjct: 77 LKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQ--IMKADANGDGYITLEEFLAF 132
Score = 31.6 bits (70), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 91 FSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLL-KRMDKDGSLEISFNEWRDFLLY 149
F LD N DG + +E+ KAF I + +L+ K +D DG+ EI E+ F
Sbjct: 6 FKQLDANGDGSVSYEEV-KAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAA 64
Query: 150 CPFSDIREQNVSAQKTWKLI 169
D+ ++ V + +KL+
Sbjct: 65 VKEQDLSDEKVGLKILYKLM 84
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 19 EERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLER---SDSNRSGDISLAE 75
+++LE F D DGNGKI + +L+ FG+ L ++ + E DSN GD+ E
Sbjct: 425 KDKLESAFQKFDQDGNGKISVDELASV---FGLDHLESKTWKEMISGIDSNNDGDVDFEE 481
Query: 76 FIHYVKE 82
F +++
Sbjct: 482 FCKMIQK 488
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 67/144 (46%), Gaps = 19/144 (13%)
Query: 16 QEDEERLEKLFVALDTDGNGKIDIHDL----SK------ALKDFGVHSLYAQKFLERSDS 65
QE+ + L +F +D +G+G++D +L SK A+ D L +D
Sbjct: 342 QEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADF 401
Query: 66 NRSGDISLAEFIHYVKEHEK-----HLRLGFSHLDKNQDGKIDLQELQKAFQELGID-ID 119
+R+G I +EF+ + + L F D++ +GKI + EL F G+D ++
Sbjct: 402 DRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVF---GLDHLE 458
Query: 120 ENEAKKLLKRMDKDGSLEISFNEW 143
K+++ +D + ++ F E+
Sbjct: 459 SKTWKEMISGIDSNNDGDVDFEEF 482
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%)
Query: 84 EKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
E+ L+ F DK+Q+G I EL+ LG + + E ++++K D DG ++++ E+
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 62
Query: 144 RDFLLYC 150
++
Sbjct: 63 VKMMMTV 69
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 40/183 (21%)
Query: 1 MLTLKCEAMLKLKLPQEDEERLEK---LFVALDTDGNGKIDIHDL-SKALKDFGV----- 51
M + +KLK ED + + + +F LD +GNGKI + ++ SKA D
Sbjct: 1 MTDTASKYAVKLKTNFEDPKWVNRHKFMFNFLDINGNGKITLDEIVSKASDDICAKLGAT 60
Query: 52 ------HSLYAQKFLERSDSNRSGDISLAEFIHYVKEHEKH-LRLGFSHLDKNQDGKIDL 104
H + F ++ + ++ F++ KE KH L+L +N+
Sbjct: 61 PAQTQRHQEAVEAFFKKIGLDYGKEVEFPAFVNGWKELAKHDLKL----WSQNK------ 110
Query: 105 QELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEWRDFLLYCPFSDIREQNVSAQK 164
+ L + + E DI DKDGS IS +EW+ Y S I + A+K
Sbjct: 111 KSLIRNWGEAVFDI-----------FDKDGSGSISLDEWK---TYGGISGICPSDEDAEK 156
Query: 165 TWK 167
T+K
Sbjct: 157 TFK 159
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 20/119 (16%)
Query: 16 QEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSL-------------YAQKFLER 62
Q +E +E F + D +++ K+ H L + + +
Sbjct: 65 QRHQEAVEAFFKKIGLDYGKEVEFPAFVNGWKELAKHDLKLWSQNKKSLIRNWGEAVFDI 124
Query: 63 SDSNRSGDISLAEFIHY-----VKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGI 116
D + SG ISL E+ Y + ++ F H D + GK+D+ E+ + Q LG
Sbjct: 125 FDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDEMTR--QHLGF 181
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 63 SDSNRSGDISLAEFIHYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENE 122
+D R+ + F ++ + ++ F+ +D+N+DG ID+ +L++ F LG D+ E
Sbjct: 1 ADKERAQRATXNVFARLPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKE 60
Query: 123 AKKLLK 128
+LK
Sbjct: 61 LTAMLK 66
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/129 (19%), Positives = 57/129 (44%), Gaps = 8/129 (6%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERSDSNRSGDIS 72
+LPQ+ + +++ F +D + +G IDI+DL + G K L G ++
Sbjct: 16 RLPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTP--DDKELTAMLKEAPGPLN 73
Query: 73 LAEFIHYVK------EHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKL 126
F+ + E+ +R F D+ K++++ ++ + +G + +++E +
Sbjct: 74 FTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMT 133
Query: 127 LKRMDKDGS 135
K +G
Sbjct: 134 FKEAPVEGG 142
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 36/65 (55%)
Query: 84 EKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
E+ L+ F LDK + G I + L+ + LG ++ E+E + ++ D DGS + + E+
Sbjct: 6 ERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEF 65
Query: 144 RDFLL 148
+ ++
Sbjct: 66 KCLMM 70
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 8 AMLKLKLPQEDEERLEKLFVALDTDGNGKID---IHDLSKALKDF-GVHSLYAQKFLE-- 61
A + L + ++ E++L+ F D DGNG ID + D+ A++ G +L ++F+
Sbjct: 81 AAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLV 140
Query: 62 --RSDSNRSGDISLAEFIHYVKEHEKHLRLGFSHLD 95
+ D N G+++L EFI+ + + + L + + D
Sbjct: 141 FHKIDINNDGELTLEEFINGMAKDQDLLEIVYKSFD 176
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 12/145 (8%)
Query: 33 GNGKIDIHDLSKALKDFGVHSLYAQKFLERSDSNRSGDISLAEFIHYV------KEHEKH 86
GNGK I KA+ H Y +E SG +L EF + ++ KH
Sbjct: 4 GNGK-SIAGDQKAVPTQETHVWYRTFMMEYP----SGLQTLHEFKTLLGLQGLNQKANKH 58
Query: 87 LRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEWRDF 146
+ ++ D N+DG +D E A + + E + K K D DG+ I NE D
Sbjct: 59 IDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDM 118
Query: 147 LLYCPFSDIREQNVSAQKTWKLIFH 171
+ + +Q +S ++ L+FH
Sbjct: 119 FMAVQALN-GQQTLSPEEFINLVFH 142
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 70 DISLAEFIHYVKEHEKHLRLGFS-HLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLK 128
DI A +E + + F + +DG I +EL K + LG + E ++++
Sbjct: 3 DIYKAAVEQLTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMID 62
Query: 129 RMDKDGSLEISFNEWRDFLLYC 150
+D+DGS + F+E+ ++ C
Sbjct: 63 EVDEDGSGTVDFDEFLVMMVRC 84
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%)
Query: 84 EKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
E+ L+ F DK+Q+G I EL+ LG + + E ++++ D DG +I++ E+
Sbjct: 3 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 62
Query: 144 RDFLL 148
++
Sbjct: 63 VKVMM 67
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 34.7 bits (78), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 63 SDSNRSGDISLAEFIHYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENE 122
+D R+ + F ++ + ++ F+ +D+N+DG ID+ +L++ F LG D+ E
Sbjct: 1 ADKERAQRATSNVFARLPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKE 60
Query: 123 AKKLLK 128
+LK
Sbjct: 61 LTAMLK 66
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/129 (19%), Positives = 57/129 (44%), Gaps = 8/129 (6%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERSDSNRSGDIS 72
+LPQ+ + +++ F +D + +G IDI+DL + G K L G ++
Sbjct: 16 RLPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTP--DDKELTAMLKEAPGPLN 73
Query: 73 LAEFIHYVK------EHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKL 126
F+ + E+ +R F D+ K++++ ++ + +G + +++E +
Sbjct: 74 FTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMT 133
Query: 127 LKRMDKDGS 135
K +G
Sbjct: 134 FKEAPVEGG 142
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 34.7 bits (78), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 16 QEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLY---AQKFLERSDSNRSGDIS 72
Q+DEE + + F D +G+G ID + ++ G L ++ ++ +D + +G I
Sbjct: 4 QDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVID 63
Query: 73 LAEFIHYVKEHEKHLR 88
+ EF+ +K+ + L+
Sbjct: 64 IPEFMDLIKKSKNALK 79
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 34.7 bits (78), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 70 DISLAEFIHYVKEHEKHLRLGFS-HLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLK 128
DI A +E + + F + +DG I +EL K + LG + E ++++
Sbjct: 3 DIYKAAVEQLTEEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMID 62
Query: 129 RMDKDGSLEISFNEWRDFLLYC 150
+D+DGS + F+E+ ++ C
Sbjct: 63 EVDEDGSGTVDFDEFLVMMVRC 84
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 34.3 bits (77), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 17/125 (13%)
Query: 38 DIHDLSKALKDFGVHSLYAQKFLERSDSNRSGDISLAEFIHYVKEH-----EKHLRLGFS 92
D + K FG +A D + +G I EFI + E+ L F
Sbjct: 47 DFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFE 106
Query: 93 HLDKNQDGKIDLQEL----QKAFQELG--IDIDENEA------KKLLKRMDKDGSLEISF 140
D N DG I E+ ++ +G + ++E+EA KK+ K MDK+ I+
Sbjct: 107 LYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITL 166
Query: 141 NEWRD 145
+E+R+
Sbjct: 167 DEFRE 171
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 34.3 bits (77), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 85 KHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLK 128
+ ++ F+ +D+N+DG ID+ +L++ F LG D+ E +LK
Sbjct: 2 QEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLK 45
Score = 26.2 bits (56), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 22/122 (18%), Positives = 53/122 (43%), Gaps = 8/122 (6%)
Query: 20 ERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERSDSNRSGDISLAEFIHY 79
+ +++ F +D + +G IDI+DL + G K L G ++ F+
Sbjct: 2 QEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTP--DDKELTAMLKEAPGPLNFTMFLSI 59
Query: 80 VK------EHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKD 133
+ E+ +R F D++ K++++ ++ + +G + +++E + K +
Sbjct: 60 FSDKLSGTDSEETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE 119
Query: 134 GS 135
G
Sbjct: 120 GG 121
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 34.3 bits (77), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 70 DISLAEFIHYVKEHEKHLRLGFS-HLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLK 128
DI A E + + F + +DG I +EL K + LG + E ++++
Sbjct: 3 DIYKAAVEQLTDEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMID 62
Query: 129 RMDKDGSLEISFNEWRDFLLYC 150
+D+DGS + F+E+ ++ C
Sbjct: 63 EVDEDGSGTVDFDEFLVMMVRC 84
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 34.3 bits (77), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 85 KHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLK 128
+ ++ F+ +D+N+DG ID+ +L++ F LG D+ E +LK
Sbjct: 19 QEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLK 62
Score = 30.8 bits (68), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/137 (19%), Positives = 60/137 (43%), Gaps = 8/137 (5%)
Query: 5 KCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERSD 64
K + + KLPQ+ + +++ F +D + +G IDI+DL + G K L
Sbjct: 4 KAASGVLTKLPQKQIQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTP--DDKELTAML 61
Query: 65 SNRSGDISLAEFIHYVK------EHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDI 118
G ++ F+ + E+ +R F D+ K++++ ++ + +G +
Sbjct: 62 KEAPGPLNFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNF 121
Query: 119 DENEAKKLLKRMDKDGS 135
+++E + K +G
Sbjct: 122 NKDEMRMTFKEAPVEGG 138
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 33.9 bits (76), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 13 KLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQ--KFLERSDSNRSGD 70
+L +E+ L++LF +DTD +G I +L LK G + ++ ++ +D ++SG
Sbjct: 16 RLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGT 75
Query: 71 ISLAEFI 77
I EFI
Sbjct: 76 IDYGEFI 82
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 33.9 bits (76), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 14/85 (16%)
Query: 19 EERLEKLFVALDTDGNGKID--------------IHDLSKALKDFGVHSLYAQKFLERSD 64
E++L+ F D DGNG I + + K +D +K + D
Sbjct: 98 EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMD 157
Query: 65 SNRSGDISLAEFIHYVKEHEKHLRL 89
+NR G +SL EFI K +RL
Sbjct: 158 TNRDGKLSLEEFIRGAKSDPSIVRL 182
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 32/120 (26%)
Query: 14 LPQEDEERL-EKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERS--------D 64
P D + E +F D +G+G ID + AL S+ ++ LE+ D
Sbjct: 56 FPYGDASKFAEHVFRTFDANGDGTIDFREFIIAL------SVTSRGKLEQKLKWAFSMYD 109
Query: 65 SNRSGDISLAEFIHYVK-----------------EHEKHLRLGFSHLDKNQDGKIDLQEL 107
+ +G IS AE + V+ EK F +D N+DGK+ L+E
Sbjct: 110 LDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEF 169
Score = 26.6 bits (57), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 22/127 (17%)
Query: 34 NGKIDIHDLSKALKDF---GVHSLYAQKFLERSDSNRSGDISLAEFIHYVK-----EHEK 85
+G + + + K +F G S +A+ D+N G I EFI + + E+
Sbjct: 40 SGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQ 99
Query: 86 HLRLGFSHLDKNQDGKIDLQELQKAFQEL------GIDIDENEA------KKLLKRMD-- 131
L+ FS D + +G I E+ + Q + + + E+E+ +K+ ++MD
Sbjct: 100 KLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTN 159
Query: 132 KDGSLEI 138
+DG L +
Sbjct: 160 RDGKLSL 166
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 33.5 bits (75), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 16/115 (13%)
Query: 52 HSLYAQKFLERSDSNRSGDISLAEFIHYV-------KEHEKHLRLGFSHLDKNQDGKIDL 104
+L+A + + D R+G I EF+ + HEK ++ F D Q G I+
Sbjct: 72 RNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEK-VKFAFKLYDLRQTGFIER 130
Query: 105 QELQKAFQEL--------GIDIDENEAKKLLKRMDKDGSLEISFNEWRDFLLYCP 151
+EL++ L D+ E K + D+ +I +EW+DF+ P
Sbjct: 131 EELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNP 185
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 33.5 bits (75), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 84 EKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
E+ L F DKN DG ID++EL + + G + E + + L+K DK+ I F+E+
Sbjct: 9 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEF 68
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 19 EERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGDISLAEF 76
EE L F D + +G IDI +L + L+ G H + + ++ SD N G I EF
Sbjct: 9 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEF 68
Query: 77 IHYVK 81
+ ++
Sbjct: 69 LKMME 73
>pdb|1QAS|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase
Delta 1
pdb|1QAS|B Chain B, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase
Delta 1
pdb|1QAT|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase
Delta Complex With Samarium (Iii) Chloride
pdb|1QAT|B Chain B, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase
Delta Complex With Samarium (Iii) Chloride
Length = 622
Score = 33.5 bits (75), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 95 DKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMD 131
DKN+D K++ +EL+ +EL I +D+ A+K+ + D
Sbjct: 19 DKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECD 55
>pdb|1DJG|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Lanthanum
pdb|1DJG|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Lanthanum
pdb|1DJH|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Barium
pdb|1DJH|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Barium
pdb|1DJI|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Calcium
pdb|1DJI|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Calcium
pdb|1DJW|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2-Methylene-1,2-Cyclic-
Monophosphonate
pdb|1DJW|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2-Methylene-1,2-Cyclic-
Monophosphonate
pdb|1DJX|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-1,4,5-Trisphosphate
pdb|1DJX|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-1,4,5-Trisphosphate
pdb|1DJY|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2,4,5-Trisphosphate
pdb|1DJY|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2,4,5-Trisphosphate
pdb|1DJZ|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-4,5-Bisphosphate
pdb|1DJZ|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-4,5-Bisphosphate
pdb|2ISD|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
pdb|2ISD|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Length = 624
Score = 33.5 bits (75), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 95 DKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMD 131
DKN+D K++ +EL+ +EL I +D+ A+K+ + D
Sbjct: 21 DKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECD 57
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 33.5 bits (75), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 98 QDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEWRDFLLYC 150
+DG I +EL K + LG + E ++++ +D+DGS + F+E+ ++ C
Sbjct: 32 EDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRC 84
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 33.5 bits (75), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 16 QEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERSDSNRSGDISLAE 75
+D+ L+ L+ +D DG+GK+ +++ K G+ + Q + ++D+N G I+L E
Sbjct: 1 SDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQ--VMKADANGDGYITLEE 58
Query: 76 FIHY 79
F+ +
Sbjct: 59 FLEF 62
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 33.1 bits (74), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 16/115 (13%)
Query: 52 HSLYAQKFLERSDSNRSGDISLAEFIHYV-------KEHEKHLRLGFSHLDKNQDGKIDL 104
+L+A + + D R+G I EF+ + HEK ++ F D Q G I+
Sbjct: 72 RNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEK-VKFAFKLYDLRQTGFIER 130
Query: 105 QELQKAFQEL--------GIDIDENEAKKLLKRMDKDGSLEISFNEWRDFLLYCP 151
+EL++ L D+ E K + D+ +I +EW+DF+ P
Sbjct: 131 EELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNP 185
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 33.1 bits (74), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 8 AMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGV-----HSLYAQKF--- 59
A L L L + +++L F D DGNG ID +L +K ++ A++F
Sbjct: 76 AALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNM 135
Query: 60 -LERSDSNRSGDISLAEFIHYVKEHEKHLRLGFSHLD 95
++ D N G++SL EF+ V++ E L + LD
Sbjct: 136 VFDKIDINGDGELSLEEFMEGVQKDEVLLDILTRSLD 172
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 33.1 bits (74), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%)
Query: 84 EKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
E+ +R F DK+ +G I EL+ LG + + E ++++ D DG ++++ E+
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
Score = 26.9 bits (58), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 19 EERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSDSNRSGDISLAEF 76
EE + + F D DGNG I +L + + G + + + +D + G ++ EF
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
Query: 77 IH 78
+
Sbjct: 64 VQ 65
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 33.1 bits (74), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 37/63 (58%)
Query: 81 KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISF 140
K+ ++ + F D ++ GKI + L++ +ELG ++ + E ++++ D+DG E+S
Sbjct: 17 KDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSE 76
Query: 141 NEW 143
E+
Sbjct: 77 QEF 79
Score = 29.6 bits (65), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 8 AMLKLKLPQED-EERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSD 64
++ K+ ++D +E + K F D D GKI +L + K+ G + Q+ ++ +D
Sbjct: 8 TVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEAD 67
Query: 65 SNRSGDISLAEFIHYVK 81
+ G++S EF+ +K
Sbjct: 68 RDGDGEVSEQEFLRIMK 84
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 33.1 bits (74), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 90 GFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
F DK+ DG I ++EL + L + E E + ++ +D DG+ I F+E+
Sbjct: 15 AFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEF 68
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 33.1 bits (74), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%)
Query: 84 EKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
E+ +R F DK+ +G I EL+ LG + + E ++++ D DG ++++ E+
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Score = 26.9 bits (58), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 19 EERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSDSNRSGDISLAEF 76
EE + + F D DGNG I +L + + G + + + +D + G ++ EF
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 77 IH 78
+
Sbjct: 61 VQ 62
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 33.1 bits (74), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 90 GFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
F DK+ DG I ++EL + L + E E + ++ +D DG+ I F+E+
Sbjct: 15 AFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEF 68
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 33.1 bits (74), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%)
Query: 84 EKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
E+ +R F DK+ +G I EL+ LG + + E ++++ D DG ++++ E+
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
Score = 26.9 bits (58), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 19 EERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSDSNRSGDISLAEF 76
EE + + F D DGNG I +L + + G + + + +D + G ++ EF
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
Query: 77 IH 78
+
Sbjct: 64 VQ 65
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 32.7 bits (73), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%)
Query: 84 EKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
E+ +R F DK+ +G I EL+ LG + + E ++++ D DG ++++ E+
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 64
Score = 26.9 bits (58), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 19 EERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSDSNRSGDISLAEF 76
EE + + F D DGNG I +L + + G + + + +D + G ++ EF
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 64
Query: 77 IH 78
+
Sbjct: 65 VQ 66
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 32.7 bits (73), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%)
Query: 84 EKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
E+ +R F DK+ +G I EL+ LG + + E ++++ D DG ++++ E+
Sbjct: 7 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 66
Score = 26.9 bits (58), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 19 EERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSDSNRSGDISLAEF 76
EE + + F D DGNG I +L + + G + + + +D + G ++ EF
Sbjct: 7 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 66
Query: 77 IH 78
+
Sbjct: 67 VQ 68
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 32.7 bits (73), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%)
Query: 84 EKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
E+ +R F DK+ +G I EL+ LG + + E ++++ D DG ++++ E+
Sbjct: 8 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 67
Score = 26.9 bits (58), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 19 EERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSDSNRSGDISLAEF 76
EE + + F D DGNG I +L + + G + + + +D + G ++ EF
Sbjct: 8 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 67
Query: 77 IH 78
+
Sbjct: 68 VQ 69
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 32/54 (59%)
Query: 90 GFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
F D ++ GKI + L++ +ELG ++ + E ++++ D+DG E+S E+
Sbjct: 16 AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEF 69
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 20 ERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSDSNRSGDISLAEFI 77
E + K F D D GKI +L + K+ G + Q+ ++ +D + G++S EF+
Sbjct: 11 EEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFL 70
Query: 78 HYVK 81
+K
Sbjct: 71 RIMK 74
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 85 KHLRLGFSHLDKNQDGKIDLQELQKAFQE-LGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
K LR F D N DG+I EL++A ++ LG + + +++++ +D +G + F E+
Sbjct: 7 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 66
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 20 ERLEKLFVALDTDGNGKIDIHDLSKALKDFGVH-SLYAQKFLERSDSNRSGDISLAEFIH 78
++ + ++ DTD +G I ++L A + G H + + + R S+ +G++ FI
Sbjct: 77 KKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSDETGNMDFDNFIS 136
Query: 79 YVKEHEKHLRLGFSHLDKNQDGKIDL 104
+ + R F LDKN G+I +
Sbjct: 137 CLVRLDAMFR-AFRSLDKNGTGQIQV 161
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 49/113 (43%), Gaps = 14/113 (12%)
Query: 34 NGKIDIHDLSKALKDFGVHSLYAQKFLERS-------DSNRSGDISLAEFIHYVKEHEKH 86
+G++D +L + L G++ Y+ LE D + +G + F KE
Sbjct: 13 DGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAF----KELWAA 68
Query: 87 LRL---GFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSL 136
L F +D++ G ++ EL++A +G + ++KR K+G +
Sbjct: 69 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRI 121
Score = 29.6 bits (65), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 13/54 (24%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 97 NQDGKIDLQELQKAFQELGID-----IDENEAKKLLKRMDKDGSLEISFNEWRD 145
QDG++D +ELQ+ + GI+ + ++ +D+D + ++ FN +++
Sbjct: 11 GQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKE 64
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 49/113 (43%), Gaps = 14/113 (12%)
Query: 34 NGKIDIHDLSKALKDFGVHSLYAQKFLERS-------DSNRSGDISLAEFIHYVKEHEKH 86
+G++D +L + L G++ Y+ LE D + +G + F KE
Sbjct: 13 DGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAF----KELWAA 68
Query: 87 LRL---GFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSL 136
L F +D++ G ++ EL++A +G + ++KR K+G +
Sbjct: 69 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRI 121
Score = 29.6 bits (65), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 13/54 (24%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 97 NQDGKIDLQELQKAFQELGID-----IDENEAKKLLKRMDKDGSLEISFNEWRD 145
QDG++D +ELQ+ + GI+ + ++ +D+D + ++ FN +++
Sbjct: 11 GQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKE 64
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 91 FSHLDKNQDGKIDLQELQ---KAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
F +D + G I+ +EL+ K+F G D+ + E K LK DKDG +I +E+
Sbjct: 48 FKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEF 103
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 22 LEKLFVALDTDGNGKIDIHDLSKALKDFGVHS-----LYAQKFLERSDSNRSGDISLAEF 76
++K+F A+D D +G I+ +L LK F + FL+ +D + G I + EF
Sbjct: 44 VKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEF 103
Query: 77 IHYVKE 82
V E
Sbjct: 104 ETLVHE 109
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 20 ERLEKLFVALDTDGNGKIDIHDLSKALKDFGVH-SLYAQKFLERSDSNRSGDISLAEFIH 78
++ + ++ DTD +G I ++L A + G H + + + R S+ +G++ FI
Sbjct: 88 KKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSDETGNMDFDNFIS 147
Query: 79 YVKEHEKHLRLGFSHLDKNQDGKIDLQ 105
+ + R F LDKN G+I +
Sbjct: 148 CLVRLDAMFR-AFRSLDKNGTGQIQVN 173
>pdb|2JJZ|A Chain A, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
Length = 150
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 32/58 (55%)
Query: 91 FSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEWRDFLL 148
+ D N +G+IDL L++ ++LG+ E KK++ + S IS+ ++ + +L
Sbjct: 56 YMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMML 113
>pdb|2JJZ|B Chain B, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|C Chain C, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|D Chain D, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2VTG|A Chain A, Crystal Structure Of Human Iba2, Trigonal Crystal Form
Length = 150
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 32/58 (55%)
Query: 91 FSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEWRDFLL 148
+ D N +G+IDL L++ ++LG+ E KK++ + S IS+ ++ + +L
Sbjct: 56 YMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMML 113
>pdb|1DVI|A Chain A, Calpain Domain Vi With Calcium Bound
pdb|1DVI|B Chain B, Calpain Domain Vi With Calcium Bound
Length = 184
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 20 ERLEKLFVALDTDGNGKIDIHDLSKALKDFGVH-SLYAQKFLERSDSNRSGDISLAEFIH 78
++ + ++ DTD +G I ++L A + G H + + + R S+ +G++ FI
Sbjct: 88 KKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSDETGNMDFDNFIS 147
Query: 79 YVKEHEKHLRLGFSHLDKNQDGKIDLQ 105
+ + R F LDKN G+I +
Sbjct: 148 CLVRLDAMFR-AFRSLDKNGTGQIQVN 173
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 68 SGDISLAEFIHYVKEHEKHLRLGFS-HLDKNQDGKIDLQELQKAFQELGIDIDENEAKKL 126
+ DI A +E + + F + +DG I +EL K + LG + E +++
Sbjct: 1 AADIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEM 60
Query: 127 LKRMDKDGSLEISFNEW 143
+ +D+DGS + F+E+
Sbjct: 61 IDEVDEDGSGTVDFDEF 77
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 91 FSHLDKNQDGKIDLQELQ---KAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
F LDK++DG ID EL K F D+ E K L+ DKDG +I E+
Sbjct: 47 FHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 102
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 31.6 bits (70), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%)
Query: 84 EKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
E+ +R F DK+ +G I EL+ LG + + E ++++ D DG ++++ E+
Sbjct: 28 EEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 87
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 31.6 bits (70), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 98 QDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
+DG I +EL K + LG + E ++++ +D+DGS + F+E+
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 31.6 bits (70), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 98 QDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
+DG I +EL K + LG + E ++++ +D+DGS + F+E+
Sbjct: 32 EDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 19/143 (13%)
Query: 17 EDEERLEKLFVALDTDGNGKID----------IHDLSKALKDFGVHSLYAQKFLERSDSN 66
E+ + L +F LD +G+G++D + + L + L+ D +
Sbjct: 352 EERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFD 411
Query: 67 RSGDISLAEFIHYVKE-----HEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGI-DIDE 120
++G I +EFI + E+ LR F+ D ++ GKI +EL F G+ I E
Sbjct: 412 KNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLF---GLTSISE 468
Query: 121 NEAKKLLKRMDKDGSLEISFNEW 143
+L D++ I F+E+
Sbjct: 469 KTWNDVLGEADQNKDNMIDFDEF 491
Score = 30.4 bits (67), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 19 EERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKF---LERSDSNRSGDISLAE 75
EERL + F DTD +GKI +L+ FG+ S+ + + L +D N+ I E
Sbjct: 434 EERLRRAFNLFDTDKSGKITKEELANL---FGLTSISEKTWNDVLGEADQNKDNMIDFDE 490
Query: 76 FI 77
F+
Sbjct: 491 FV 492
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 11/77 (14%)
Query: 82 EHEKHLRLGFSHLDKNQDGKIDLQELQKAF-------QELG-IDIDENEAKKLLKRMDKD 133
E K L F LDKN DG++D +EL + + ELG + E E +LK +D D
Sbjct: 352 EERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFD 411
Query: 134 GSLEISFNEWRDFLLYC 150
+ + E+ +F+ C
Sbjct: 412 KN---GYIEYSEFISVC 425
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 31.2 bits (69), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 20 ERLEKLFVALDTDGNGKIDIHDLSKALKDFGVH-SLYAQKFLERSDSNRSGDISLAEFIH 78
+R + ++ DTD +G I +L A + G H + + + R S+ SG++ FI
Sbjct: 88 KRWQAIYKQFDTDRSGTICSSELPGAFEAAGFHLNEHLYNMIIRRYSDESGNMDFDNFIS 147
Query: 79 YVKEHEKHLRLGFSHLDKNQDGKIDLQ 105
+ + R F LDK+ G+I +
Sbjct: 148 CLVRLDAMFR-AFKSLDKDGTGQIQVN 173
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 82 EHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFN 141
E LR F+ D N+ G+++ +E + EL + + EA + +R+D D I+F
Sbjct: 24 EELARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEA--VFQRLDADRDGAITFQ 81
Query: 142 EW-RDFL 147
E+ R FL
Sbjct: 82 EFARGFL 88
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 31.2 bits (69), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 11/88 (12%)
Query: 23 EKLFVALDTDGNGKIDIHDLSKALKDFG------VHSLYAQKFLERSDSNRSGDISLAEF 76
+ +F D D +G ID ++L +AL FG H + +KF D G I+ +F
Sbjct: 77 QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF----DRQGRGQIAFDDF 132
Query: 77 IHYVKEHEKHLRLGFSHLDKNQDGKIDL 104
I ++ + F D +QDG I +
Sbjct: 133 IQGCIVLQRLTDI-FRRYDTDQDGWIQV 159
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 31.2 bits (69), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 11/88 (12%)
Query: 23 EKLFVALDTDGNGKIDIHDLSKALKDFG------VHSLYAQKFLERSDSNRSGDISLAEF 76
+ +F D D +G ID ++L +AL FG H + +KF D G I+ +F
Sbjct: 73 QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF----DRQGRGQIAFDDF 128
Query: 77 IHYVKEHEKHLRLGFSHLDKNQDGKIDL 104
I ++ + F D +QDG I +
Sbjct: 129 IQGCIVLQRLTDI-FRRYDTDQDGWIQV 155
>pdb|3POK|A Chain A, Interleukin-1-Beta Lbt L3 Mutant
Length = 167
Score = 31.2 bits (69), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 34 NGKIDIHDLSKALKDFGVHSLYAQKFLERSDSNRSGDISLAEFIHYVKEHEKHLRLGFSH 93
+G ++ L +D +++ F++ +SN ++L +KE +L +
Sbjct: 22 SGPYELKALHLQGQDMEQQVVFSMSFVQGEESNDKIPVALG-----LKEKNLYLSCVLGY 76
Query: 94 LDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKR 129
+D N DG I+ EL Q +D KK+ KR
Sbjct: 77 IDTNNDGWIEGDELYPTLQLESVDPKNYPKKKMEKR 112
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 31.2 bits (69), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 70/143 (48%), Gaps = 30/143 (20%)
Query: 6 CEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERSDS 65
+A + K ++E+ L+ +F ++D DGNG+ID ++ +K Y S
Sbjct: 22 VKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAK---------FYG--------S 64
Query: 66 NRSGDISLAEFIHYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKK 125
+ D+S + + L++ + +D + DGK+ +E+ F++ GI E A++
Sbjct: 65 IQGQDLS---------DDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI---EKVAEQ 112
Query: 126 LLKRMDKDGSLEISFNEWRDFLL 148
++K D +G I+ E+ +F L
Sbjct: 113 VMK-ADANGDGYITLEEFLEFSL 134
Score = 29.6 bits (65), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 91 FSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLL-KRMDKDGSLEISFNEWRDFLLY 149
F +D N DG + +E+ KAF I + +L+ K +D DG+ EI NE+ F
Sbjct: 6 FKEIDVNGDGAVSYEEV-KAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 150 CPFSDIREQNVSAQKTWKLI 169
D+ + + + +KL+
Sbjct: 65 IQGQDLSDDKIGLKVLYKLM 84
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 31.2 bits (69), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 20/132 (15%)
Query: 34 NGKIDIHDLSKALK---DFGVHSLYAQKFLERSDSNRSGDISLAEFIHYVKEHEK----- 85
+G++D K K FG + +A D N+ G I +EFI + +
Sbjct: 40 SGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDE 99
Query: 86 HLRLGFSHLDKNQDGKIDLQEL----QKAFQELGIDI----DENEAKKLLKR----MDKD 133
LR F D + DG I E+ +Q +G + +EN +K + R MDK+
Sbjct: 100 KLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKN 159
Query: 134 GSLEISFNEWRD 145
+++ E+++
Sbjct: 160 ADGKLTLQEFQE 171
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 84 EKHLRLGFSHLDKNQDGKIDLQELQKA 110
EK + F+ +DKN DGK+ LQE Q+
Sbjct: 146 EKRVDRIFAMMDKNADGKLTLQEFQEG 172
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 31.2 bits (69), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 11/88 (12%)
Query: 23 EKLFVALDTDGNGKIDIHDLSKALKDFG------VHSLYAQKFLERSDSNRSGDISLAEF 76
+ +F D D +G ID ++L +AL FG H + +KF D G I+ +F
Sbjct: 74 QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF----DRQGRGQIAFDDF 129
Query: 77 IHYVKEHEKHLRLGFSHLDKNQDGKIDL 104
I ++ + F D +QDG I +
Sbjct: 130 IQGCIVLQRLTDI-FRRYDTDQDGWIQV 156
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 31.2 bits (69), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 70/143 (48%), Gaps = 30/143 (20%)
Query: 6 CEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERSDS 65
+A + K ++E+ L+ +F ++D DGNG+ID ++ +K Y S
Sbjct: 22 VKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAK---------FYG--------S 64
Query: 66 NRSGDISLAEFIHYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKK 125
+ D+S + + L++ + +D + DGK+ +E+ F++ GI E A++
Sbjct: 65 IQGQDLS---------DDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI---EKVAEQ 112
Query: 126 LLKRMDKDGSLEISFNEWRDFLL 148
++K D +G I+ E+ +F L
Sbjct: 113 VMK-ADANGDGYITLEEFLEFSL 134
Score = 29.6 bits (65), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 91 FSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLL-KRMDKDGSLEISFNEWRDFLLY 149
F +D N DG + +E+ KAF I + +L+ K +D DG+ EI NE+ F
Sbjct: 6 FKEIDVNGDGAVSYEEV-KAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 150 CPFSDIREQNVSAQKTWKLI 169
D+ + + + +KL+
Sbjct: 65 IQGQDLSDDKIGLKVLYKLM 84
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 13/99 (13%)
Query: 58 KFLERSDSNRS-------GDISLAEFIHYVK---EHEKHLRLGFSHLDKNQDGKIDLQEL 107
K L+ D N++ G F H V + + ++ F LDK+Q G I+ +EL
Sbjct: 4 KVLKADDINKAISAFKDPGTFDYKRFFHLVGLKGKTDAQVKEVFEILDKDQSGFIEEEEL 63
Query: 108 Q---KAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
+ K F G D+++ E K LL D D +I +E+
Sbjct: 64 KGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEF 102
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 11/88 (12%)
Query: 23 EKLFVALDTDGNGKIDIHDLSKALKDFG------VHSLYAQKFLERSDSNRSGDISLAEF 76
+ +F D D +G ID ++L +AL FG H + +KF D G I+ +F
Sbjct: 96 QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF----DRQGRGQIAFDDF 151
Query: 77 IHYVKEHEKHLRLGFSHLDKNQDGKIDL 104
I ++ + F D +QDG I +
Sbjct: 152 IQGCIVLQRLTDI-FRRYDTDQDGWIQV 178
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 30.8 bits (68), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 28/159 (17%)
Query: 10 LKLKLPQ----EDEERLEKLFVALDTDGNGKIDIHDLSKA------LKDFGVH--SLYAQ 57
++ +P+ E + R +LF DT+G GK+ ++ L +F H + +
Sbjct: 37 IRCAIPRDKDAESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQR 96
Query: 58 KFLERSDSNRS----GDISLAEFIH------YVKEHEKHLRLGFSHLDKNQDGKIDLQEL 107
F + D G+ L EF+ Y+ + L + F +DK+ ++LQE
Sbjct: 97 AFDKAKDLGNKVKGVGEEDLVEFLEFRLMLCYIYDI-FELTVMFDTMDKDGSLLLELQEF 155
Query: 108 QKA---FQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
++A +E G+DI +A + +D +GS ++F+E+
Sbjct: 156 KEALPKLKEWGVDI--TDATTVFNEIDTNGSGVVTFDEF 192
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 30.8 bits (68), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 11/88 (12%)
Query: 23 EKLFVALDTDGNGKIDIHDLSKALKDFG------VHSLYAQKFLERSDSNRSGDISLAEF 76
+ +F D D +G ID ++L +AL FG H + +KF D G I+ +F
Sbjct: 95 QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKF----DRQGRGQIAFDDF 150
Query: 77 IHYVKEHEKHLRLGFSHLDKNQDGKIDL 104
I ++ + F D +QDG I +
Sbjct: 151 IQGCIVLQRLTDI-FRRYDTDQDGWIQV 177
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 30.8 bits (68), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 45/121 (37%), Gaps = 22/121 (18%)
Query: 14 LPQEDEERLEK-LFVALDTDGNGKIDIHDLSKALKDF---GVHSLYAQKFLERSDSNRSG 69
PQ D LF A D DGNG I D L VH F D N+ G
Sbjct: 122 FPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAF-NLYDINKDG 180
Query: 70 DISLAEFIHYVKE-------HE----------KHLRLGFSHLDKNQDGKIDLQELQKAFQ 112
I+ E + +K H +H+ F +D+NQDG + + E + Q
Sbjct: 181 CITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQ 240
Query: 113 E 113
+
Sbjct: 241 K 241
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 30.8 bits (68), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 60/140 (42%), Gaps = 18/140 (12%)
Query: 18 DEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERSDSNRSGDISLAEFI 77
D+ ++ F D G G+I + L+ G + A+ + +S ++ + +F+
Sbjct: 3 DDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAE--ITEIESTLPAEVDMEQFL 60
Query: 78 HYVK---------EHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLK 128
+ + E+ ++ GF DK+ G I + EL+ LG + E +LLK
Sbjct: 61 QVLNRPNGFDMPGDPEEFVK-GFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLK 119
Query: 129 RMD-KDGSLEISFNEWRDFL 147
+ KDG + + DF+
Sbjct: 120 GVPVKDGMV-----NYHDFV 134
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 30.4 bits (67), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 45/120 (37%), Gaps = 22/120 (18%)
Query: 14 LPQEDEERLEK-LFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKF---LERSDSNRSG 69
PQ D LF A DTD NG + D K L + +K D N+ G
Sbjct: 95 FPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSIL-LRGTVQEKLNWAFNLYDINKDG 153
Query: 70 DISLAEFIHYVK-----------------EHEKHLRLGFSHLDKNQDGKIDLQELQKAFQ 112
I+ E + +K +H+ F +DKN+DG + + E ++ Q
Sbjct: 154 YITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQ 213
Score = 26.9 bits (58), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 14/84 (16%)
Query: 19 EERLEKLFVALDTDGNGKI---DIHDLSKALKDFGVHSLY-----------AQKFLERSD 64
+E+L F D + +G I ++ D+ KA+ D Y + F ++ D
Sbjct: 137 QEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMD 196
Query: 65 SNRSGDISLAEFIHYVKEHEKHLR 88
N+ G +++ EFI ++ E +R
Sbjct: 197 KNKDGVVTIDEFIESCQKDENIMR 220
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 30.4 bits (67), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 42/109 (38%), Gaps = 21/109 (19%)
Query: 25 LFVALDTDGNGKIDIHDLSKALKDF---GVHSLYAQKFLERSDSNRSGDISLAEFIHYVK 81
LF A DT G + D AL VH F D N+ G I+ E + VK
Sbjct: 94 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTF-NLYDINKDGYINKEEMMDIVK 152
Query: 82 -----------------EHEKHLRLGFSHLDKNQDGKIDLQELQKAFQE 113
+H+ + F +DKN+DG + L E ++ QE
Sbjct: 153 AIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQE 201
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 30.4 bits (67), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 81 KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISF 140
+E + F D + G I +EL + LG + + E +++ +D+DGS I F
Sbjct: 5 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 64
Query: 141 NEW 143
E+
Sbjct: 65 EEF 67
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 30.0 bits (66), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 14/62 (22%), Positives = 33/62 (53%)
Query: 82 EHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFN 141
+ E+ +R F DK+ +G I +L+ LG + + E ++++ D DG ++++
Sbjct: 4 DSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 63
Query: 142 EW 143
++
Sbjct: 64 DF 65
Score = 27.3 bits (59), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 14 LPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSDSNRSGDI 71
+ + EE + + F D DGNG I DL + + G + + + +D + G +
Sbjct: 1 MDTDSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 60
Query: 72 SLAEFIH 78
+ +F+
Sbjct: 61 NYEDFVQ 67
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 30.0 bits (66), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 42/109 (38%), Gaps = 21/109 (19%)
Query: 25 LFVALDTDGNGKIDIHDLSKALKDF---GVHSLYAQKFLERSDSNRSGDISLAEFIHYVK 81
LF A DT G + D AL VH F D N+ G I+ E + VK
Sbjct: 58 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTF-NLYDINKDGYINKEEMMDIVK 116
Query: 82 -----------------EHEKHLRLGFSHLDKNQDGKIDLQELQKAFQE 113
+H+ + F +DKN+DG + L E ++ QE
Sbjct: 117 AIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQE 165
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 30.0 bits (66), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 86 HLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
+ F D + G I +EL + LG + + E +++ +D+DGS I F E+
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 30.0 bits (66), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 91 FSHLDKNQDGKIDLQELQ---KAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEWRDFL 147
F +D +Q G +D EL+ + FQ ++ E+E K L+ D DG +I +E+++ +
Sbjct: 47 FRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMV 106
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 30.0 bits (66), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 42/109 (38%), Gaps = 21/109 (19%)
Query: 25 LFVALDTDGNGKIDIHDLSKALKDF---GVHSLYAQKFLERSDSNRSGDISLAEFIHYVK 81
LF A DT G + D AL VH F D N+ G I+ E + VK
Sbjct: 58 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTF-NLYDINKDGYINKEEMMDIVK 116
Query: 82 -----------------EHEKHLRLGFSHLDKNQDGKIDLQELQKAFQE 113
+H+ + F +DKN+DG + L E ++ QE
Sbjct: 117 AIYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQE 165
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 30.0 bits (66), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 98 QDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEWRDFLLYC 150
+DG I +EL K + LG + E ++ + +D+DGS + F+E+ + C
Sbjct: 32 EDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEFLVXXVRC 84
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 30.0 bits (66), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 12 LKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFG-----VHSLYAQKFLERSDSN 66
+ L + ++++K+F LD D +G I+ +L LK+F + S + FL D++
Sbjct: 34 VGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTD 93
Query: 67 RSGDISLAEFIHYVK 81
G I + EF VK
Sbjct: 94 GDGKIGVEEFQSLVK 108
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 29.6 bits (65), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 42/109 (38%), Gaps = 21/109 (19%)
Query: 25 LFVALDTDGNGKIDIHDLSKALKDF---GVHSLYAQKFLERSDSNRSGDISLAEFIHYVK 81
LF A DT G + D AL VH F D N+ G I+ E + VK
Sbjct: 61 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTF-NLYDINKDGYINKEEMMDIVK 119
Query: 82 -----------------EHEKHLRLGFSHLDKNQDGKIDLQELQKAFQE 113
+H+ + F +DKN+DG + L E ++ QE
Sbjct: 120 AIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQE 168
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 29.6 bits (65), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 12 LKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFG-----VHSLYAQKFLERSDSN 66
+ L + ++++K+F LD D +G I+ +L LK+F + S + FL D++
Sbjct: 33 VGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTD 92
Query: 67 RSGDISLAEFIHYVK 81
G I + EF VK
Sbjct: 93 GDGKIGVEEFQSLVK 107
>pdb|3SJS|A Chain A, Crystal Structure Of Ure3-Binding Protein From Entamoeba
Histolytica, (D127a,N129a) Mutant, Native Form
pdb|3SIA|A Chain A, Crystal Structure Of Ure3-Binding Protein, (D127a,N129a)
Mutant, Iodide Phased
Length = 220
Score = 29.6 bits (65), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 91 FSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNE 142
F +D+++ G +++ EL GI + A ++++ D D + ISF E
Sbjct: 57 FMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYE 108
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 29.6 bits (65), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 91 FSHLDKNQDGKIDLQELQ---KAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEWRDFL 147
F +D +Q G +D +EL+ + F+ ++ E+E K L+ D DG +I E+++ +
Sbjct: 48 FRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEEFQEMV 107
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 95 DKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW----RDF 146
DKN DG+I+ E LG + + EA + ++D +G+ E+S +E RDF
Sbjct: 112 DKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGNGELSLDELLTAVRDF 165
Score = 27.3 bits (59), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 29/53 (54%)
Query: 30 DTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERSDSNRSGDISLAEFIHYVKE 82
D + +G+I+ + + L G+ A + + D+N +G++SL E + V++
Sbjct: 112 DKNADGQINADEFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLTAVRD 164
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 27/40 (67%)
Query: 5 KCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSK 44
+ +A + K ++E+ L+ +F ++D DGNG+ID ++ +K
Sbjct: 21 EVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAK 60
Score = 26.6 bits (57), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 91 FSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLL-KRMDKDGSLEISFNEWRDF 146
F +D N DG + +E+ KAF I + +L+ K +D DG+ EI NE+ F
Sbjct: 6 FKEIDVNGDGAVSYEEV-KAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 58/135 (42%), Gaps = 13/135 (9%)
Query: 22 LEKLFVALDT-DGNGKIDIHDLSKALKDFGVHSLYA--QKFLERSDSNRSGDISLAEF-- 76
LE F +T +G+G++ + L+ G+ + ++ ++ D +GDI F
Sbjct: 15 LETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKI 74
Query: 77 --IHYVKEH------EKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLK 128
++ E ++ LR F DK +G I +++ EL + + ++
Sbjct: 75 IGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMID 134
Query: 129 RMDKDGSLEISFNEW 143
+D DGS + F E+
Sbjct: 135 EIDADGSGTVDFEEF 149
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 91 FSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
F DKN+DGK+ L E ++ + + K + +D DG+ E++ +E+
Sbjct: 7 FEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEF 59
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 87 LRLGFSHLDKNQDGKIDLQELQKAFQELGID---IDENEAKKLLKRMDKDGSLEISFNEW 143
++ F+ +D+++ G I+ EL+ Q D + + E K LK D DG +I +EW
Sbjct: 43 VKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDEW 102
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 81 KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISF 140
+E + F D + G I +EL + LG + + E ++ +D+DGS I F
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDF 75
Query: 141 NEW 143
E+
Sbjct: 76 EEF 78
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 91 FSHLDKNQDGKIDLQELQ---KAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
F LDK++ G I+ EL K F D+ E K L+ DKDGS +I E+
Sbjct: 47 FHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSGKIEVEEF 102
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Query: 86 HLRLGFSHLDKNQDGKIDLQELQK------AFQELGIDIDENEAKKLLKRMDKDGSLEIS 139
L F LD N DG + ELQ A++ L D + + KL+K DK+ +IS
Sbjct: 8 ELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKIS 67
Query: 140 FNEW 143
E+
Sbjct: 68 KEEF 71
>pdb|2JER|A Chain A, Agmatine Deiminase Of Enterococcus Faecalis Catalyzing Its
Reaction.
pdb|2JER|B Chain B, Agmatine Deiminase Of Enterococcus Faecalis Catalyzing Its
Reaction.
pdb|2JER|C Chain C, Agmatine Deiminase Of Enterococcus Faecalis Catalyzing Its
Reaction.
pdb|2JER|D Chain D, Agmatine Deiminase Of Enterococcus Faecalis Catalyzing Its
Reaction.
pdb|2JER|E Chain E, Agmatine Deiminase Of Enterococcus Faecalis Catalyzing Its
Reaction.
pdb|2JER|F Chain F, Agmatine Deiminase Of Enterococcus Faecalis Catalyzing Its
Reaction.
pdb|2JER|G Chain G, Agmatine Deiminase Of Enterococcus Faecalis Catalyzing Its
Reaction.
pdb|2JER|H Chain H, Agmatine Deiminase Of Enterococcus Faecalis Catalyzing Its
Reaction
Length = 389
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/99 (19%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 16 QEDEERLEKLFVALDTDGNGK-IDIHDLSKALKDFGVHSLYAQKFLERSDSNRSGDISLA 74
Q+ +RL K+ TD G+ + +H L +K+ + + F+E + GDI +A
Sbjct: 248 QDAYQRLLKM-----TDAKGRQLKVHKLCCPVKNVTIKGSFKIDFVEGTMPREDGDICIA 302
Query: 75 EFIHYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQE 113
+++++ ++ + + +++ ++ L+++Q F +
Sbjct: 303 SYMNFLITNDGVIVPQYG----DENDRLALEQVQTMFPD 337
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 11 KLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDF--GVHSLY---AQKFLERSDS 65
K L + + ++K FV +D D +G I+ +L L+ F G +L + FL+ DS
Sbjct: 33 KCGLSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDS 92
Query: 66 NRSGDISLAEFIHYVK 81
+ G I + E++ VK
Sbjct: 93 DGDGAIGVEEWVALVK 108
Score = 27.3 bits (59), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 87 LRLGFSHLDKNQDGKIDLQELQ---KAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
++ F +D+++ G I+ EL+ + F+ + + E K LK D DG I EW
Sbjct: 44 IKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVEEW 103
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 11 KLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDF--GVHSLY---AQKFLERSDS 65
K L + + ++K FV +D D +G I+ +L L+ F G +L + FL+ DS
Sbjct: 32 KCGLSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDS 91
Query: 66 NRSGDISLAEFIHYVK 81
+ G I + E++ VK
Sbjct: 92 DGDGAIGVEEWVALVK 107
Score = 27.3 bits (59), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 87 LRLGFSHLDKNQDGKIDLQELQ---KAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
++ F +D+++ G I+ EL+ + F+ + + E K LK D DG I EW
Sbjct: 43 IKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVEEW 102
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 91 FSHLDKNQDGKIDLQELQ---KAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEWR 144
F LDK++ G I+ EL K F D+ E K L+ DKDG +I E+
Sbjct: 47 FHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEEFS 103
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 53/136 (38%), Gaps = 21/136 (15%)
Query: 20 ERLEKLFVALDTDGNGKIDIHDLSKALKDF----------GVHSLYAQKFLERSDSNRSG 69
E K + DTD +G I+ +L LKD + Y L+ DSN G
Sbjct: 103 EEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDG 162
Query: 70 DISLAEFIHYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGID----IDENEAKK 125
+ L E + E L K Q K+ +E KAF+ D IDENE
Sbjct: 163 KLELTEMARLLPVQENFLL-------KFQGIKMCGKEFNKAFELYDQDGNGYIDENELDA 215
Query: 126 LLKRMDKDGSLEISFN 141
LLK + + E+ N
Sbjct: 216 LLKDLCEKNKQELDIN 231
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 54/133 (40%), Gaps = 14/133 (10%)
Query: 25 LFVALDTDGNGKIDIHDLSKALKDFGVHSL--YAQKFLERSDSNR-SGDISLAEFIHYVK 81
+F D G G I L L+ G + Q + S R + ++L + ++
Sbjct: 9 IFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIE 68
Query: 82 EHEKHLRL-----------GFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRM 130
+EK L F DK GK+ + +L+ LG + + E +LLK +
Sbjct: 69 VNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGV 128
Query: 131 DKDGSLEISFNEW 143
+ D + EI + ++
Sbjct: 129 EVDSNGEIDYKKF 141
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 28/54 (51%)
Query: 82 EHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGS 135
E ++ + F DK+ D K+ +EL + LG + + + +++K DKD S
Sbjct: 11 EEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNS 64
>pdb|1SP4|B Chain B, Crystal Structure Of Ns-134 In Complex With Bovine
Cathepsin B: A Two Headed Epoxysuccinyl Inhibitor
Extends Along The Whole Active Site Cleft
Length = 205
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 121 NEAKKLLKRMDKDGSLEISFNEWRDFLLY 149
N K+++ + K+G +E +F+ + DFLLY
Sbjct: 107 NNEKEIMAEIYKNGPVEGAFSVYSDFLLY 135
>pdb|1ITO|A Chain A, Crystal Structure Analysis Of Bovine Spleen Cathepsin B-
E64c Complex
pdb|2DC6|A Chain A, X-ray Crystal Structure Analysis Of Bovine Spleen
Cathepsin B-ca073 Complex
pdb|2DC7|A Chain A, X-ray Crystal Structure Analysis Of Bovine Spleen
Cathepsin B-ca042 Complex
pdb|2DC8|A Chain A, X-ray Crystal Structure Analysis Of Bovine Spleen
Cathepsin B-ca059 Complex
pdb|2DC9|A Chain A, X-Ray Crystal Structure Analysis Of Bovine Spleen
Cathepsin B-Ca074me Complex
pdb|2DCA|A Chain A, X-ray Crystal Structure Analysis Of Bovine Spleen
Cathepsin B-ca075 Complex
pdb|2DCB|A Chain A, X-Ray Crystal Structure Analysis Of Bovine Spleen
Cathepsin B-Ca076 Complex
pdb|2DCC|A Chain A, X-Ray Crystal Structure Analysis Of Bovine Spleen
Cathepsin B-Ca077 Complex
pdb|2DCD|A Chain A, X-Ray Crystal Structure Analysis Of Bovine Spleen
Cathepsin B-Ca078 Complex
Length = 256
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 121 NEAKKLLKRMDKDGSLEISFNEWRDFLLY 149
N K+++ + K+G +E +F+ + DFLLY
Sbjct: 155 NNEKEIMAEIYKNGPVEGAFSVYSDFLLY 183
>pdb|1QDQ|A Chain A, X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074
Complex
Length = 253
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 121 NEAKKLLKRMDKDGSLEISFNEWRDFLLY 149
N K+++ + K+G +E +F+ + DFLLY
Sbjct: 155 NNEKEIMAEIYKNGPVEGAFSVYSDFLLY 183
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 91 FSHLDKNQDGKIDLQELQ---KAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
F LDK++ G I+ EL K F D+ E K L+ DKDG +I +E+
Sbjct: 48 FHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEF 103
>pdb|1WY9|A Chain A, Crystal Structure Of Microglia-Specific Protein, Iba1
Length = 147
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 26 FVALDTDGNGKIDIHDLSKALKDFGVHS--LYAQKFLERSDSNRSGDISLAEFIHYV-KE 82
++ D +GNG IDI L + L+ GV L ++ + S S ++F+ + +
Sbjct: 54 YMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK 113
Query: 83 HEKHLRLGFSHLDKNQDGKIDL-QELQKAFQEL 114
LR+ + +KN++ K +KA EL
Sbjct: 114 RSAILRMILMYEEKNKEHKRPTGPPAKKAISEL 146
Score = 27.3 bits (59), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/61 (21%), Positives = 32/61 (52%)
Query: 88 RLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEWRDFL 147
++ + D N +G ID+ L++ ++LG+ E K+L++ + S++++ +
Sbjct: 51 KVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMM 110
Query: 148 L 148
L
Sbjct: 111 L 111
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 86 HLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
+ F D + G I + L + LG + + E +++ +D+DGS I F E+
Sbjct: 21 EFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 20 ERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQKF---LERSDSNRSGDISLAEF 76
E L+ F A D DG+G I + +L +A+ G L ++ + +D ++ G ++ EF
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLG-QPLPQEELDAMIREADVDQDGRVNYEEF 64
Query: 77 IHYVKE 82
+ +
Sbjct: 65 ARMLAQ 70
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 26 FVALDTDGNGKIDIHDLSKALKDFGVHS--LYAQKFLERSDSNRSGDISLAEFIHYV 80
++ D +GNG IDI L + L+ GV L +K + S S +F+ +
Sbjct: 57 YMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMM 113
Score = 26.2 bits (56), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 91 FSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEWRDFLL 148
+ D N +G ID+ L++ ++LG+ E KKL+ + S+ ++ +L
Sbjct: 57 YMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMML 114
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 14 LPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHS--LYAQKFLERSDSNRSGDI 71
LP + E EK ++ D +GNG IDI L + L+ GV L +K + S
Sbjct: 27 LPSKLEGFKEK-YMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETF 85
Query: 72 SLAEFIHYV 80
S +F+ +
Sbjct: 86 SYPDFLRMM 94
Score = 26.6 bits (57), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 91 FSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEWRDFLL 148
+ D N +G ID+ L++ ++LG+ E KKL+ + S+ ++ +L
Sbjct: 38 YMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMML 95
>pdb|1PWU|A Chain A, Crystal Structure Of Anthrax Lethal Factor Complexed With
(3-(n-hydroxycarboxamido)-2-isobutylpropanoyl-trp-
Methylamide), A Known Small Molecule Inhibitor Of Matrix
Metalloproteases.
pdb|1PWU|B Chain B, Crystal Structure Of Anthrax Lethal Factor Complexed With
(3-(n-hydroxycarboxamido)-2-isobutylpropanoyl-trp-
Methylamide), A Known Small Molecule Inhibitor Of Matrix
Metalloproteases.
pdb|1PWW|A Chain A, Crystal Structure Of Anthrax Lethal Factor Active Site
Mutant Protein Complexed With An Optimised Peptide
Substrate In The Presence Of Zinc.
pdb|1PWW|B Chain B, Crystal Structure Of Anthrax Lethal Factor Active Site
Mutant Protein Complexed With An Optimised Peptide
Substrate In The Presence Of Zinc
Length = 776
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 60/125 (48%), Gaps = 24/125 (19%)
Query: 28 ALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERSDSNRSGDISLAEFIHYVK-EHEKH 86
A D+DG + + L + DF V +FLE+ +SN ++ F +Y++ +H
Sbjct: 180 ASDSDGQDLLFTNQLKEHPTDFSV------EFLEQ-NSNEVQEVFAKAFAYYIEPQHRDV 232
Query: 87 LRL----GFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNE 142
L+L F+++DK + QE+ + ++E + +++L R +K ++ +
Sbjct: 233 LQLYAPEAFNYMDKFNE------------QEINLSLEELKDQRMLSRYEKWEKIKQHYQH 280
Query: 143 WRDFL 147
W D L
Sbjct: 281 WSDSL 285
>pdb|3K9M|A Chain A, Cathepsin B In Complex With Stefin A
pdb|3K9M|B Chain B, Cathepsin B In Complex With Stefin A
Length = 254
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 120 ENEAKKLLKRMDKDGSLEISFNEWRDFLLY 149
N K ++ + K+G +E +F+ + DFLLY
Sbjct: 154 SNSEKDIMAEIYKNGPVEGAFSVYSDFLLY 183
>pdb|3AI8|B Chain B, Cathepsin B In Complex With The Nitroxoline
pdb|3AI8|A Chain A, Cathepsin B In Complex With The Nitroxoline
Length = 256
Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 120 ENEAKKLLKRMDKDGSLEISFNEWRDFLLY 149
N K ++ + K+G +E +F+ + DFLLY
Sbjct: 156 SNSEKDIMAEIYKNGPVEGAFSVYSDFLLY 185
>pdb|1HUC|B Chain B, The Refined 2.15 Angstroms X-Ray Crystal Structure Of
Human Liver Cathepsin B: The Structural Basis For Its
Specificity
pdb|1HUC|D Chain D, The Refined 2.15 Angstroms X-Ray Crystal Structure Of
Human Liver Cathepsin B: The Structural Basis For Its
Specificity
pdb|1CSB|B Chain B, Crystal Structure Of Cathepsin B Inhibited With Ca030 At
2.1 Angstroms Resolution: A Basis For The Design Of
Specific Epoxysuccinyl Inhibitors
pdb|1CSB|E Chain E, Crystal Structure Of Cathepsin B Inhibited With Ca030 At
2.1 Angstroms Resolution: A Basis For The Design Of
Specific Epoxysuccinyl Inhibitors
pdb|2IPP|B Chain B, Crystal Structure Of The Tetragonal Form Of Human Liver
Cathepsin B
Length = 205
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 120 ENEAKKLLKRMDKDGSLEISFNEWRDFLLY 149
N K ++ + K+G +E +F+ + DFLLY
Sbjct: 105 SNSEKDIMAEIYKNGPVEGAFSVYSDFLLY 134
>pdb|1J7N|A Chain A, Anthrax Toxin Lethal Factor
pdb|1J7N|B Chain B, Anthrax Toxin Lethal Factor
pdb|1JKY|A Chain A, Crystal Structure Of The Anthrax Lethal Factor (Lf): Wild-
Type Lf Complexed With The N-Terminal Sequence Of Mapkk2
pdb|1PWP|A Chain A, Crystal Structure Of The Anthrax Lethal Factor Complexed
With Small Molecule Inhibitor Nsc 12155
pdb|1PWP|B Chain B, Crystal Structure Of The Anthrax Lethal Factor Complexed
With Small Molecule Inhibitor Nsc 12155
pdb|1PWQ|A Chain A, Crystal Structure Of Anthrax Lethal Factor Complexed With
Thioacetyl-Tyr-Pro-Met-Amide, A Metal-Chelating Peptidyl
Small Molecule Inhibitor
pdb|1PWQ|B Chain B, Crystal Structure Of Anthrax Lethal Factor Complexed With
Thioacetyl-Tyr-Pro-Met-Amide, A Metal-Chelating Peptidyl
Small Molecule Inhibitor
pdb|1PWV|A Chain A, Crystal Structure Of Anthrax Lethal Factor Wild-Type
Protein Complexed With An Optimised Peptide Substrate.
pdb|1PWV|B Chain B, Crystal Structure Of Anthrax Lethal Factor Wild-Type
Protein Complexed With An Optimised Peptide Substrate.
pdb|1ZXV|A Chain A, X-Ray Crystal Structure Of The Anthrax Lethal Factor Bound
To A Small Molecule Inhibitor, Bi-Mfm3,
3-{5-[5-(4-Chloro-
Phenyl)-Furan-2-Ylmethylene]-4-Oxo-2-Thioxo-Thiazolidin-
3- Yl}-Propionic Acid.
pdb|1ZXV|B Chain B, X-Ray Crystal Structure Of The Anthrax Lethal Factor Bound
To A Small Molecule Inhibitor, Bi-Mfm3,
3-{5-[5-(4-Chloro-
Phenyl)-Furan-2-Ylmethylene]-4-Oxo-2-Thioxo-Thiazolidin-
3- Yl}-Propionic Acid
Length = 776
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 60/125 (48%), Gaps = 24/125 (19%)
Query: 28 ALDTDGNGKIDIHDLSKALKDFGVHSLYAQKFLERSDSNRSGDISLAEFIHYVK-EHEKH 86
A D+DG + + L + DF V +FLE+ +SN ++ F +Y++ +H
Sbjct: 180 ASDSDGQDLLFTNQLKEHPTDFSV------EFLEQ-NSNEVQEVFAKAFAYYIEPQHRDV 232
Query: 87 LRL----GFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNE 142
L+L F+++DK + QE+ + ++E + +++L R +K ++ +
Sbjct: 233 LQLYAPEAFNYMDKFNE------------QEINLSLEELKDQRMLSRYEKWEKIKQHYQH 280
Query: 143 WRDFL 147
W D L
Sbjct: 281 WSDSL 285
>pdb|1GMY|A Chain A, Cathepsin B Complexed With Dipeptidyl Nitrile Inhibitor
pdb|1GMY|B Chain B, Cathepsin B Complexed With Dipeptidyl Nitrile Inhibitor
pdb|1GMY|C Chain C, Cathepsin B Complexed With Dipeptidyl Nitrile Inhibitor
Length = 261
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 121 NEAKKLLKRMDKDGSLEISFNEWRDFLLY 149
N K ++ + K+G +E +F+ + DFLLY
Sbjct: 156 NSEKDIMAEIYKNGPVEGAFSVYSDFLLY 184
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 27.7 bits (60), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 62/150 (41%), Gaps = 30/150 (20%)
Query: 21 RLEKLFVALDTDGNGKIDIHDLSK-------ALKDFGVHSLYAQK--------------- 58
RL F +LD NG + D + L D +++ +++
Sbjct: 30 RLYSRFTSLDKGENGTLSREDFQRIPELAINPLGDRIINAFFSEGEDQVNFRGFMRTLAH 89
Query: 59 FLERSDSNRSGDISLAEFIHYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQEL-GID 117
F D+ +S D++ E ++ L F D ++D KI EL + + + G++
Sbjct: 90 FRPIEDNEKSKDVNGPEPLN---SRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVN 146
Query: 118 IDENE----AKKLLKRMDKDGSLEISFNEW 143
I + + A + ++ D+DG ISF E+
Sbjct: 147 ISDEQLGSIADRTIQEADQDGDSAISFTEF 176
>pdb|1PBH|A Chain A, Crystal Structure Of Human Recombinant Procathepsin B At
3.2 Angstrom Resolution
pdb|2PBH|A Chain A, Crystal Structure Of Human Procathepsin B At 3.3 Angstrom
Resolution
pdb|3PBH|A Chain A, Refined Crystal Structure Of Human Procathepsin B At 2.5
Angstrom Resolution
Length = 317
Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 120 ENEAKKLLKRMDKDGSLEISFNEWRDFLLY 149
N K ++ + K+G +E +F+ + DFLLY
Sbjct: 217 SNSEKDIMAEIYKNGPVEGAFSVYSDFLLY 246
>pdb|3CBJ|A Chain A, Chagasin-cathepsin B Complex
pdb|3CBK|A Chain A, Chagasin-Cathepsin B
Length = 266
Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 121 NEAKKLLKRMDKDGSLEISFNEWRDFLLY 149
N K ++ + K+G +E +F+ + DFLLY
Sbjct: 161 NSEKDIMAEIYKNGPVEGAFSVYSDFLLY 189
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 27.3 bits (59), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 91 FSHLDKNQDGKIDLQELQ---KAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
F LDK++ G I+ EL K F D+ E K L+ DKDG +I E+
Sbjct: 47 FHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 102
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 27.3 bits (59), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 91 FSHLDKNQDGKIDLQELQ---KAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
F LDK++ G I+ EL K F D+ E K L+ DKDG +I E+
Sbjct: 11 FHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 66
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin
Bound To The Iq Motif Of Nav1.2
Length = 73
Score = 27.3 bits (59), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 16 QEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFG--VHSLYAQKFLERSDSNRSGDISL 73
Q+ EE L + F D DGNG I +L + + G + + + +D + G I+
Sbjct: 4 QDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINY 63
Query: 74 AEFIHYV 80
EF+ +
Sbjct: 64 EEFVRMM 70
>pdb|3C9H|A Chain A, Crystal Structure Of The Substrate Binding Protein Of The
Abc Transporter From Agrobacterium Tumefaciens
pdb|3C9H|B Chain B, Crystal Structure Of The Substrate Binding Protein Of The
Abc Transporter From Agrobacterium Tumefaciens
Length = 355
Score = 27.3 bits (59), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 14/80 (17%)
Query: 74 AEFIHYVKEHEK--HLRL----------GFSHLDKNQDGKIDLQELQKAFQELGIDIDEN 121
AEF+ Y++ H K H R+ GF + ++Q+ D+ + KA G+ + +
Sbjct: 156 AEFVDYLERHAKEVHGRIATYDIERSGVGFLFMSRDQEQFGDIWSVIKAMGAAGVKV-YS 214
Query: 122 EAKKLLKRMDKDGSLEISFN 141
+ +L+R+ DG + +N
Sbjct: 215 TSSAILERVS-DGRFVLGYN 233
>pdb|4EXK|A Chain A, A Chimera Protein Containing Mbp Fused To The C-Terminal
Domain Of The Uncharacterized Protein Stm14_2015 From
Salmonella Enterica
Length = 487
Score = 27.3 bits (59), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 13/81 (16%)
Query: 30 DTDGNGKIDIH-------DLSKALKDFG------VHSLYAQKFLERSDSNRSGDISLAEF 76
D DGN ++H + K L D+G V Y Q R SN DIS
Sbjct: 405 DIDGNPVNEVHINKTVARENLKGLWDYGPLKKENVPGKYTQVITYRGHSNERIDISFKYA 464
Query: 77 IHYVKEHEKHLRLGFSHLDKN 97
+ + KE RL S + N
Sbjct: 465 MSFTKEISIRGRLSLSSVKNN 485
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 27.3 bits (59), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 15/77 (19%)
Query: 52 HSLYAQKFLERSDSNRSGDISLAEFIHYVK----EHEKHLRLG---------FSHLDKNQ 98
+S+ K + D++ SG IS AE +++K +H+K + DKN+
Sbjct: 102 NSVEFXKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAXXKIFDKNK 161
Query: 99 DGKIDLQELQK--AFQE 113
DG++DL +L + A QE
Sbjct: 162 DGRLDLNDLARILALQE 178
>pdb|2SAS|A Chain A, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Amphioxus Refined At 2.4 Angstroms Resolution
Length = 185
Score = 27.3 bits (59), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 14 LPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDF 49
LP + R+ LF +D G+G +D+ + K+F
Sbjct: 99 LPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNF 134
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 27.3 bits (59), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 27/44 (61%)
Query: 85 KHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLK 128
+ L+ F+ +D+++DG I +++L+ F LG ++E +LK
Sbjct: 16 QELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLK 59
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 27.3 bits (59), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 11 KLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLY-----AQKFLERSDS 65
K+ L + + ++K F +D D +G I+ +L L++F + + FL+ DS
Sbjct: 33 KVGLTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDS 92
Query: 66 NRSGDISLAEFIHYVK 81
+ G I + EF VK
Sbjct: 93 DGDGKIGVDEFTALVK 108
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 26.9 bits (58), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 87 LRLGFSHLDKNQDGKIDLQELQKAFQ-ELGIDIDE----NEAKKLLKRMDKDGSLEISFN 141
L F D ++DGKI E+ + + +G+ + E N A + ++ D+DG +SF
Sbjct: 116 LHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFV 175
Query: 142 EW 143
E+
Sbjct: 176 EF 177
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 26.9 bits (58), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 61/150 (40%), Gaps = 30/150 (20%)
Query: 21 RLEKLFVALDTDGNGKIDIHDLSK-------ALKDFGVHSLYAQK--------------- 58
RL F +LD NG + D + L D +++ + +
Sbjct: 30 RLYSRFTSLDKGENGTLSREDFQRIPELAINPLGDRIINAFFPEGEDQVNFRGFMRTLAH 89
Query: 59 FLERSDSNRSGDISLAEFIHYVKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQEL-GID 117
F D+ +S D++ E ++ L F D ++D KI EL + + + G++
Sbjct: 90 FRPIEDNEKSKDVNGPEPLN---SRSNKLHFAFRLYDLDKDEKISRDELLQVLRMMVGVN 146
Query: 118 IDENE----AKKLLKRMDKDGSLEISFNEW 143
I + + A + ++ D+DG ISF E+
Sbjct: 147 ISDEQLGSIADRTIQEADQDGDSAISFTEF 176
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 26.9 bits (58), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 84 EKHLRLGFSHLDKNQDGKIDLQELQKAFQELG 115
E+ L F DKN DG ID++EL + + G
Sbjct: 4 EEELANAFRIFDKNADGYIDIEELGEILRATG 35
>pdb|3CS1|A Chain A, Flagellar Calcium-binding Protein (fcabp) From T. Cruzi
Length = 219
Score = 26.9 bits (58), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 86 HLRLGFSHLDKNQDGKIDLQELQKAFQEL---GIDIDENEAKKLLKRMDKDGSLEISFNE 142
L + F +D + + +D +E ++A +L G +++ A L K +DK+G+ ++F+E
Sbjct: 131 ELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAA--LFKELDKNGTGSVTFDE 188
Query: 143 W 143
+
Sbjct: 189 F 189
>pdb|3T5Q|A Chain A, 3a Structure Of Lassa Virus Nucleoprotein In Complex With
Ssrna
pdb|3T5Q|B Chain B, 3a Structure Of Lassa Virus Nucleoprotein In Complex With
Ssrna
pdb|3T5Q|E Chain E, 3a Structure Of Lassa Virus Nucleoprotein In Complex With
Ssrna
pdb|3T5Q|G Chain G, 3a Structure Of Lassa Virus Nucleoprotein In Complex With
Ssrna
pdb|3T5Q|I Chain I, 3a Structure Of Lassa Virus Nucleoprotein In Complex With
Ssrna
pdb|3T5Q|K Chain K, 3a Structure Of Lassa Virus Nucleoprotein In Complex With
Ssrna
Length = 353
Score = 26.9 bits (58), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 35 GKIDIHDLSKALKDFGVHSLYAQKFLERSDSNR 67
G++D++D +AL D G+ +Y K+ SD +R
Sbjct: 204 GQVDLNDAVQALTDLGL--IYTAKYPNTSDLDR 234
>pdb|2JNK|A Chain A, Solution Sructure Of A Dockerin-Containing Modular Pair
From A Family 84 Glycoside Hydrolase
pdb|2OZN|B Chain B, The Cohesin-Dockerin Complex Of Nagj And Nagh From
Clostridium Perfringens
Length = 140
Score = 26.9 bits (58), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 30 DTDGNGKIDIHDLSKALKDFG 50
D +GNGKIDI DL+ K+ G
Sbjct: 83 DFNGNGKIDIGDLAMVSKNIG 103
>pdb|3T5N|A Chain A, 1.8a Crystal Structure Of Lassa Virus Nucleoprotein In
Complex With Ssrna
Length = 354
Score = 26.9 bits (58), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 35 GKIDIHDLSKALKDFGVHSLYAQKFLERSDSNR 67
G++D++D +AL D G+ +Y K+ SD +R
Sbjct: 205 GQVDLNDAVQALTDLGL--IYTAKYPNTSDLDR 235
>pdb|2EKF|A Chain A, Solution Structure Of Ruh-075, A Human Cue Domain
Length = 61
Score = 26.9 bits (58), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 70 DISLAEFIHYVKEHEKHLRLGFSHLDKNQDGKIDL 104
D+ LA VKE H+ LG D + G +DL
Sbjct: 10 DVQLATLAQRVKEVLPHVPLGVIQRDLAKTGCVDL 44
>pdb|3G8Y|A Chain A, Crystal Structure Of A Putative Hydrolase (Bvu_4111) From
Bacteroides Vulgatus Atcc 8482 At 1.90 A Resolution
Length = 391
Score = 26.9 bits (58), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 60 LERSDSNRSGDISLAEFIHYVKEHEKHLRLGFSHLDKNQDGKIDLQEL 107
L +S SG AEF HY K +K +R HLD+ D K + +
Sbjct: 321 LVQSAYAASGKPENAEFHHYPKFADKAVRKDVEHLDEGLDSKTYFEAV 368
>pdb|2HPK|A Chain A, Crystal Structure Of Photoprotein Berovin From Beroe
Abyssicola
Length = 208
Score = 26.9 bits (58), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 41 DLSKALKDFGVHSLYAQKFLERSDSNRSGDISLAEFIH 78
+L K F V A F E++D+++SG + E +H
Sbjct: 149 ELKTXXKAFDVPQEAAYTFFEKADTDKSGKLERTELVH 186
>pdb|3R3L|A Chain A, Structure Of Np Protein From Lassa Av Strain
pdb|3R3L|B Chain B, Structure Of Np Protein From Lassa Av Strain
pdb|3R3L|C Chain C, Structure Of Np Protein From Lassa Av Strain
Length = 582
Score = 26.9 bits (58), Expect = 5.7, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 35 GKIDIHDLSKALKDFGVHSLYAQKFLERSDSNR 67
G++D++D+ +AL D G+ +Y K+ SD +R
Sbjct: 191 GQVDLNDVVQALTDLGL--IYTAKYPNTSDLDR 221
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 26.9 bits (58), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 30/64 (46%)
Query: 80 VKEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEIS 139
+E + F DK GKI +EL + LG + E E + L+ + + + +++
Sbjct: 5 TEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLN 64
Query: 140 FNEW 143
F E+
Sbjct: 65 FTEF 68
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 26.9 bits (58), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 90 GFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFN 141
F+ +D+N+DG ID +L++ F +G +NE L M K+ S I+F
Sbjct: 17 AFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEE---LDAMIKEASGPINFT 65
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 26.9 bits (58), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 91 FSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
F DK GK+ + +L+ LG + + E +LLK ++ D + EI + ++
Sbjct: 11 FQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 63
>pdb|1DGK|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I With
Glucose And Adp In The Active Site
Length = 917
Score = 26.6 bits (57), Expect = 6.6, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 73 LAEFIHYVKEHEKHLRLGFSHLDKNQDGKID---LQELQKAFQELGI---DIDENEAKKL 126
L +F+ K +K L +GF+ Q KID L K F+ G+ D+ + K +
Sbjct: 134 LGDFMEKRKIKDKKLPVGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAI 193
Query: 127 LKRMDKDGSLEISFNEWRDFLLYCPFSD 154
KR D D ++ N+ ++ C + D
Sbjct: 194 KKRGDYDANIVAVVNDTVGTMMTCGYDD 221
>pdb|1CZA|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I
Complexed With Glucose, Glucose-6-Phosphate, And Adp
Length = 917
Score = 26.6 bits (57), Expect = 6.6, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 73 LAEFIHYVKEHEKHLRLGFSHLDKNQDGKID---LQELQKAFQELGI---DIDENEAKKL 126
L +F+ K +K L +GF+ Q KID L K F+ G+ D+ + K +
Sbjct: 134 LGDFMEKRKIKDKKLPVGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAI 193
Query: 127 LKRMDKDGSLEISFNEWRDFLLYCPFSD 154
KR D D ++ N+ ++ C + D
Sbjct: 194 KKRGDYDANIVAVVNDTVGTMMTCGYDD 221
>pdb|1HKB|A Chain A, Crystal Structure Of Recombinant Human Brain Hexokinase
Type I Complexed With Glucose And Glucose-6-Phosphate
pdb|1HKB|B Chain B, Crystal Structure Of Recombinant Human Brain Hexokinase
Type I Complexed With Glucose And Glucose-6-Phosphate
Length = 917
Score = 26.6 bits (57), Expect = 6.7, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 73 LAEFIHYVKEHEKHLRLGFSHLDKNQDGKID---LQELQKAFQELGI---DIDENEAKKL 126
L +F+ K +K L +GF+ Q KID L K F+ G+ D+ + K +
Sbjct: 134 LGDFMEKRKIKDKKLPVGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAI 193
Query: 127 LKRMDKDGSLEISFNEWRDFLLYCPFSD 154
KR D D ++ N+ ++ C + D
Sbjct: 194 KKRGDYDANIVAVVNDTVGTMMTCGYDD 221
>pdb|1HKC|A Chain A, Recombinant Human Hexokinase Type I Complexed With Glucose
And Phosphate
pdb|1QHA|A Chain A, Human Hexokinase Type I Complexed With Atp Analogue
Amp-Pnp
pdb|1QHA|B Chain B, Human Hexokinase Type I Complexed With Atp Analogue
Amp-Pnp
Length = 917
Score = 26.6 bits (57), Expect = 6.7, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 73 LAEFIHYVKEHEKHLRLGFSHLDKNQDGKID---LQELQKAFQELGI---DIDENEAKKL 126
L +F+ K +K L +GF+ Q KID L K F+ G+ D+ + K +
Sbjct: 134 LGDFMEKRKIKDKKLPVGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAI 193
Query: 127 LKRMDKDGSLEISFNEWRDFLLYCPFSD 154
KR D D ++ N+ ++ C + D
Sbjct: 194 KKRGDYDANIVAVVNDTVGTMMTCGYDD 221
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 26.6 bits (57), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 58/151 (38%), Gaps = 28/151 (18%)
Query: 20 ERLEKLFVALDTDGNGKIDIHDL-SKALKDFGV-----------HSLYAQKFLERSDSNR 67
+R + +F LD +GNGKI + ++ SKA D H + + F
Sbjct: 20 KRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEY 79
Query: 68 SGDISLAEFIHYVK-----EHEKHLR-----------LGFSHLDKNQDGKIDLQELQKAF 111
+I+ +F+ K E +K R F DK+ G I L E +
Sbjct: 80 GKEIAFPQFLDGFKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYG 139
Query: 112 QELGIDIDENEAKKLLKRMDKDGSLEISFNE 142
+ GI + + + + D D S ++ +E
Sbjct: 140 KISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 26.6 bits (57), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 57/151 (37%), Gaps = 28/151 (18%)
Query: 20 ERLEKLFVALDTDGNGKIDIHDL-SKALKDFGV-----------HSLYAQKFLERSDSNR 67
+R + +F LD +GNGKI + ++ SKA D H + + F
Sbjct: 20 KRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEY 79
Query: 68 SGDISLAEFI------------HYVKEHEKHLR----LGFSHLDKNQDGKIDLQELQKAF 111
+I+ +F+ + + +R F DK+ G I L E +
Sbjct: 80 GKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYG 139
Query: 112 QELGIDIDENEAKKLLKRMDKDGSLEISFNE 142
+ GI + + + + D D S ++ +E
Sbjct: 140 KISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 26.6 bits (57), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 15/67 (22%), Positives = 35/67 (52%)
Query: 81 KEHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKLLKRMDKDGSLEISF 140
E + LR F DK++DG I+ ++L + +G E E +L ++++ + + F
Sbjct: 6 PEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDF 65
Query: 141 NEWRDFL 147
+++ + +
Sbjct: 66 DDFVELM 72
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 26.6 bits (57), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 87 LRLGFSHLDKNQDGKIDLQELQKAFQELGID---IDENEAKKLLKRMDKDGSLEISFNEW 143
++ F+ + +++ G I+ EL+ Q D + + E K LK D DG +I +EW
Sbjct: 43 VKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDEW 102
>pdb|3L78|A Chain A, The Crystal Structure Of Smu.1142c From Streptococcus
Mutans Ua159
Length = 120
Score = 26.6 bits (57), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 108 QKAFQELGIDIDENEAKKLLKRMDKDGSL 136
K FQ+L ID+DE +L+ + K+ SL
Sbjct: 61 SKVFQKLDIDVDELSVSELINLISKNPSL 89
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 26.6 bits (57), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 87 LRLGFSHLDKNQDGKIDLQELQ---KAFQELGIDIDENEAKKLLKRMDKDGSLEISFNEW 143
++ F +D+++ G I+ EL+ + F + + E K LK D DG I +EW
Sbjct: 44 IKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEW 103
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 26.6 bits (57), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 57/151 (37%), Gaps = 28/151 (18%)
Query: 20 ERLEKLFVALDTDGNGKIDIHDL-SKALKDFGV-----------HSLYAQKFLERSDSNR 67
+R + +F LD +GNGKI + ++ SKA D H + + F
Sbjct: 20 KRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEY 79
Query: 68 SGDISLAEFI------------HYVKEHEKHLR----LGFSHLDKNQDGKIDLQELQKAF 111
+I+ +F+ + + +R F DK+ G I L E +
Sbjct: 80 GKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYG 139
Query: 112 QELGIDIDENEAKKLLKRMDKDGSLEISFNE 142
+ GI + + + + D D S ++ +E
Sbjct: 140 KISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
>pdb|1EZZ|A Chain A, Crystal Structure Of E. Coli Aspartate Transcarbamoylase
P268a Mutant In The T-State
pdb|1EZZ|C Chain C, Crystal Structure Of E. Coli Aspartate Transcarbamoylase
P268a Mutant In The T-State
pdb|1F1B|A Chain A, Crystal Structure Of E. Coli Aspartate Transcarbamoylase
P268a Mutant In The R-state In The Presence Of
N-phosphonacetyl-l-aspartate
pdb|1F1B|C Chain C, Crystal Structure Of E. Coli Aspartate Transcarbamoylase
P268a Mutant In The R-state In The Presence Of
N-phosphonacetyl-l-aspartate
Length = 310
Score = 26.6 bits (57), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 5 KCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLY 55
+ +L L QE + RL+ L VA+ D +H L++AL F + Y
Sbjct: 135 PTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFY 185
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 26.6 bits (57), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 16/100 (16%)
Query: 23 EKLFVALDTDGNGKIDIHDLSKALK--------------DFGVHSLYAQKFLERSDSNRS 68
+++F DT NG + + ++AL F ++ L Q F+ER + +
Sbjct: 88 DRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQM 147
Query: 69 GDISLAEFIHYVKEH--EKHLRLGFSHLDKNQDGKIDLQE 106
+LAE +K+ E + F D DGKID +E
Sbjct: 148 VVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEE 187
>pdb|1SKU|A Chain A, E. Coli Aspartate Transcarbamylase 240's Loop Mutant
(K244n)
pdb|1SKU|C Chain C, E. Coli Aspartate Transcarbamylase 240's Loop Mutant
(K244n)
Length = 310
Score = 26.6 bits (57), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 5 KCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLY 55
+ +L L QE + RL+ L VA+ D +H L++AL F + Y
Sbjct: 135 PTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFY 185
>pdb|1RAA|A Chain A, Crystal Structure Of Ctp-Ligated T State Aspartate
Transcarbamoylase At 2.5 Angstroms Resolution:
Implications For Atcase Mutants And The Mechanism Of
Negative Cooperativity
pdb|1RAA|C Chain C, Crystal Structure Of Ctp-Ligated T State Aspartate
Transcarbamoylase At 2.5 Angstroms Resolution:
Implications For Atcase Mutants And The Mechanism Of
Negative Cooperativity
pdb|1RAB|A Chain A, Crystal Structure Of Ctp-Ligated T State Aspartate
Transcarbamoylase At 2.5 Angstroms Resolution:
Implications For Atcase Mutants And The Mechanism Of
Negative Cooperativity
pdb|1RAB|C Chain C, Crystal Structure Of Ctp-Ligated T State Aspartate
Transcarbamoylase At 2.5 Angstroms Resolution:
Implications For Atcase Mutants And The Mechanism Of
Negative Cooperativity
pdb|1RAC|A Chain A, Crystal Structure Of Ctp-Ligated T State Aspartate
Transcarbamoylase At 2.5 Angstroms Resolution:
Implications For Atcase Mutants And The Mechanism Of
Negative Cooperativity
pdb|1RAC|C Chain C, Crystal Structure Of Ctp-Ligated T State Aspartate
Transcarbamoylase At 2.5 Angstroms Resolution:
Implications For Atcase Mutants And The Mechanism Of
Negative Cooperativity
pdb|1RAD|A Chain A, Crystal Structure Of Ctp-ligated T State Aspartate
Transcarbamoylase At 2.5 Angstroms Resolution:
Implications For Atcase Mutants And The Mechanism Of
Negative Cooperativity
pdb|1RAD|C Chain C, Crystal Structure Of Ctp-ligated T State Aspartate
Transcarbamoylase At 2.5 Angstroms Resolution:
Implications For Atcase Mutants And The Mechanism Of
Negative Cooperativity
pdb|1RAE|A Chain A, Crystal Structure Of Ctp-ligated T State Aspartate
Transcarbamoylase At 2.5 Angstroms Resolution:
Implications For Atcase Mutants And The Mechanism Of
Negative Cooperativity
pdb|1RAE|C Chain C, Crystal Structure Of Ctp-ligated T State Aspartate
Transcarbamoylase At 2.5 Angstroms Resolution:
Implications For Atcase Mutants And The Mechanism Of
Negative Cooperativity
pdb|1RAF|A Chain A, Crystal Structure Of Ctp-Ligated T State Aspartate
Transcarbamoylase At 2.5 Angstroms Resolution:
Implications For Atcase Mutants And The Mechanism Of
Negative Cooperativity
pdb|1RAF|C Chain C, Crystal Structure Of Ctp-Ligated T State Aspartate
Transcarbamoylase At 2.5 Angstroms Resolution:
Implications For Atcase Mutants And The Mechanism Of
Negative Cooperativity
pdb|1RAG|A Chain A, Crystal Structure Of Ctp-Ligated T State Aspartate
Transcarbamoylase At 2.5 Angstroms Resolution:
Implications For Atcase Mutants And The Mechanism Of
Negative Cooperativity
pdb|1RAG|C Chain C, Crystal Structure Of Ctp-Ligated T State Aspartate
Transcarbamoylase At 2.5 Angstroms Resolution:
Implications For Atcase Mutants And The Mechanism Of
Negative Cooperativity
pdb|1RAH|A Chain A, Crystal Structure Of Ctp-Ligated T State Aspartate
Transcarbamoylase At 2.5 Angstroms Resolution:
Implications For Atcase Mutants And The Mechanism Of
Negative Cooperativity
pdb|1RAH|C Chain C, Crystal Structure Of Ctp-Ligated T State Aspartate
Transcarbamoylase At 2.5 Angstroms Resolution:
Implications For Atcase Mutants And The Mechanism Of
Negative Cooperativity
pdb|1RAI|A Chain A, Crystal Structure Of Ctp-Ligated T State Aspartate
Transcarbamoylase At 2.5 Angstroms Resolution:
Implications For Atcase Mutants And The Mechanism Of
Negative Cooperativity
pdb|1RAI|C Chain C, Crystal Structure Of Ctp-Ligated T State Aspartate
Transcarbamoylase At 2.5 Angstroms Resolution:
Implications For Atcase Mutants And The Mechanism Of
Negative Cooperativity
pdb|3CSU|A Chain A, Catalytic Trimer Of Escherichia Coli Aspartate
Transcarbamoylase
pdb|3CSU|B Chain B, Catalytic Trimer Of Escherichia Coli Aspartate
Transcarbamoylase
pdb|3CSU|C Chain C, Catalytic Trimer Of Escherichia Coli Aspartate
Transcarbamoylase
pdb|1Q95|A Chain A, Aspartate Transcarbamylase (Atcase) Of Escherichia Coli: A
New Crystalline R State Bound To Pala, Or To Product
Analogues Phosphate And Citrate
pdb|1Q95|B Chain B, Aspartate Transcarbamylase (Atcase) Of Escherichia Coli: A
New Crystalline R State Bound To Pala, Or To Product
Analogues Phosphate And Citrate
pdb|1Q95|C Chain C, Aspartate Transcarbamylase (Atcase) Of Escherichia Coli: A
New Crystalline R State Bound To Pala, Or To Product
Analogues Phosphate And Citrate
pdb|1Q95|D Chain D, Aspartate Transcarbamylase (Atcase) Of Escherichia Coli: A
New Crystalline R State Bound To Pala, Or To Product
Analogues Phosphate And Citrate
pdb|1Q95|E Chain E, Aspartate Transcarbamylase (Atcase) Of Escherichia Coli: A
New Crystalline R State Bound To Pala, Or To Product
Analogues Phosphate And Citrate
pdb|1Q95|F Chain F, Aspartate Transcarbamylase (Atcase) Of Escherichia Coli: A
New Crystalline R State Bound To Pala, Or To Product
Analogues Phosphate And Citrate
pdb|1R0B|A Chain A, Aspartate Transcarbamylase (Atcase) Of Escherichia Coli: A
New Crystalline R State Bound To Pala, Or To Product
Analogues Phosphate And Citrate
pdb|1R0B|B Chain B, Aspartate Transcarbamylase (Atcase) Of Escherichia Coli: A
New Crystalline R State Bound To Pala, Or To Product
Analogues Phosphate And Citrate
pdb|1R0B|C Chain C, Aspartate Transcarbamylase (Atcase) Of Escherichia Coli: A
New Crystalline R State Bound To Pala, Or To Product
Analogues Phosphate And Citrate
pdb|1R0B|D Chain D, Aspartate Transcarbamylase (Atcase) Of Escherichia Coli: A
New Crystalline R State Bound To Pala, Or To Product
Analogues Phosphate And Citrate
pdb|1R0B|E Chain E, Aspartate Transcarbamylase (Atcase) Of Escherichia Coli: A
New Crystalline R State Bound To Pala, Or To Product
Analogues Phosphate And Citrate
pdb|1R0B|F Chain F, Aspartate Transcarbamylase (Atcase) Of Escherichia Coli: A
New Crystalline R State Bound To Pala, Or To Product
Analogues Phosphate And Citrate
pdb|1R0C|A Chain A, Products In The T State Of Aspartate Transcarbamylase:
Crystal Structure Of The Phosphate And
N-Carbamyl-L-Aspartate Ligated Enzyme
pdb|1R0C|G Chain G, Products In The T State Of Aspartate Transcarbamylase:
Crystal Structure Of The Phosphate And
N-Carbamyl-L-Aspartate Ligated Enzyme
pdb|1ZA1|A Chain A, Structure Of Wild-Type E. Coli Aspartate Transcarbamoylase
In The Presence Of Ctp At 2.20 A Resolution
pdb|1ZA1|C Chain C, Structure Of Wild-Type E. Coli Aspartate Transcarbamoylase
In The Presence Of Ctp At 2.20 A Resolution
pdb|1ZA2|A Chain A, Structure Of Wild-Type E. Coli Aspartate Transcarbamoylase
In The Presence Of Ctp, Carbamoyl Phosphate At 2.50 A
Resolution
pdb|1ZA2|C Chain C, Structure Of Wild-Type E. Coli Aspartate Transcarbamoylase
In The Presence Of Ctp, Carbamoyl Phosphate At 2.50 A
Resolution
pdb|2AIR|A Chain A, T-State Active Site Of Aspartate Transcarbamylase:crystal
Structure Of The Carbamyl Phosphate And L-Alanosine
Ligated Enzyme
pdb|2AIR|G Chain G, T-State Active Site Of Aspartate Transcarbamylase:crystal
Structure Of The Carbamyl Phosphate And L-Alanosine
Ligated Enzyme
pdb|2FZC|A Chain A, The Structure Of Wild-Type E. Coli Aspartate
Transcarbamoylase In Complex With Novel T State
Inhibitors At 2.10 Resolution
pdb|2FZC|C Chain C, The Structure Of Wild-Type E. Coli Aspartate
Transcarbamoylase In Complex With Novel T State
Inhibitors At 2.10 Resolution
pdb|2FZG|A Chain A, The Structure Of Wild-Type E. Coli Aspartate
Transcarbamoylase In Complex With Novel T State
Inhibitors At 2.25 Resolution
pdb|2FZG|C Chain C, The Structure Of Wild-Type E. Coli Aspartate
Transcarbamoylase In Complex With Novel T State
Inhibitors At 2.25 Resolution
pdb|2FZK|A Chain A, The Structure Of Wild-Type E. Coli Aspartate
Transcarbamoylase In Complex With Novel T State
Inhibitors At 2.50 Resolution
pdb|2FZK|C Chain C, The Structure Of Wild-Type E. Coli Aspartate
Transcarbamoylase In Complex With Novel T State
Inhibitors At 2.50 Resolution
pdb|2H3E|A Chain A, Structure Of Wild-Type E. Coli Aspartate Transcarbamoylase
In The Presence Of N-Phosphonacetyl-L-Isoasparagine At
2.3a Resolution
pdb|2H3E|C Chain C, Structure Of Wild-Type E. Coli Aspartate Transcarbamoylase
In The Presence Of N-Phosphonacetyl-L-Isoasparagine At
2.3a Resolution
pdb|2IPO|A Chain A, E. Coli Aspartate Transcarbamoylase Complexed With N-
Phosphonacetyl-l-asparagine
pdb|2IPO|C Chain C, E. Coli Aspartate Transcarbamoylase Complexed With N-
Phosphonacetyl-l-asparagine
pdb|2QG9|A Chain A, Structure Of A Regulatory Subunit Mutant D19a Of Atcase
From E. Coli
pdb|2QG9|C Chain C, Structure Of A Regulatory Subunit Mutant D19a Of Atcase
From E. Coli
pdb|2QGF|A Chain A, Structure Of Regulatory Chain Mutant H20a Of Asparate
Transcarbamoylase From E. Coli
pdb|2QGF|C Chain C, Structure Of Regulatory Chain Mutant H20a Of Asparate
Transcarbamoylase From E. Coli
pdb|3D7S|A Chain A, Crystal Structure Of Wild-Type E. Coli Asparate
Transcarbamoylase At Ph 8.5 At 2.80 A Resolution
pdb|3D7S|C Chain C, Crystal Structure Of Wild-Type E. Coli Asparate
Transcarbamoylase At Ph 8.5 At 2.80 A Resolution
pdb|4F04|A Chain A, A Second Allosteric Site In E. Coli Aspartate
Transcarbamoylase: R- State Atcase With Utp Bound
pdb|4F04|C Chain C, A Second Allosteric Site In E. Coli Aspartate
Transcarbamoylase: R- State Atcase With Utp Bound
pdb|4FYV|A Chain A, Aspartate Transcarbamoylase Complexed With Dctp
pdb|4FYV|C Chain C, Aspartate Transcarbamoylase Complexed With Dctp
pdb|4FYW|A Chain A, E. Coli Aspartate Transcarbamoylase Complexed With Ctp
pdb|4FYW|C Chain C, E. Coli Aspartate Transcarbamoylase Complexed With Ctp
pdb|4FYX|A Chain A, E. Coli Aspartate Transcarbamoylase Complexed With Dctp,
Utp, And Mg2+
pdb|4FYX|C Chain C, E. Coli Aspartate Transcarbamoylase Complexed With Dctp,
Utp, And Mg2+
pdb|4FYY|A Chain A, E. Coli Aspartate Transcarbamoylase Complexed With Ctp,
Utp, And Mg2+
pdb|4FYY|C Chain C, E. Coli Aspartate Transcarbamoylase Complexed With Ctp,
Utp, And Mg2+
Length = 310
Score = 26.6 bits (57), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 5 KCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLY 55
+ +L L QE + RL+ L VA+ D +H L++AL F + Y
Sbjct: 135 PTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFY 185
>pdb|1AT1|A Chain A, Crystal Structures Of Phosphonoacetamide Ligated T And
Phosphonoacetamide And Malonate Ligated R States Of
Aspartate Carbamoyltransferase At 2.8-Angstroms
Resolution And Neutral PH
pdb|1AT1|C Chain C, Crystal Structures Of Phosphonoacetamide Ligated T And
Phosphonoacetamide And Malonate Ligated R States Of
Aspartate Carbamoyltransferase At 2.8-Angstroms
Resolution And Neutral PH
pdb|2AT1|A Chain A, Crystal Structures Of Phosphonoacetamide Ligated T And
Phosphonoacetamide And Malonate Ligated R States Of
Aspartate Carbamoyltransferase At 2.8-Angstroms
Resolution And Neutral Ph
pdb|2AT1|C Chain C, Crystal Structures Of Phosphonoacetamide Ligated T And
Phosphonoacetamide And Malonate Ligated R States Of
Aspartate Carbamoyltransferase At 2.8-Angstroms
Resolution And Neutral Ph
pdb|3AT1|A Chain A, Crystal Structures Of Phosphonoacetamide Ligated T And
Phosphonoacetamide And Malonate Ligated R States Of
Aspartate Carbamoyltransferase At 2.8-Angstroms
Resolution And Neutral Ph
pdb|3AT1|C Chain C, Crystal Structures Of Phosphonoacetamide Ligated T And
Phosphonoacetamide And Malonate Ligated R States Of
Aspartate Carbamoyltransferase At 2.8-Angstroms
Resolution And Neutral Ph
pdb|4AT1|A Chain A, Structural Consequences Of Effector Binding To The T State
Of Aspartate Carbamoyltransferase. Crystal Structures Of
The Unligated And Atp-, And Ctp-Complexed Enzymes At
2.6-Angstroms Resolution
pdb|4AT1|C Chain C, Structural Consequences Of Effector Binding To The T State
Of Aspartate Carbamoyltransferase. Crystal Structures Of
The Unligated And Atp-, And Ctp-Complexed Enzymes At
2.6-Angstroms Resolution
pdb|5AT1|A Chain A, Structural Consequences Of Effector Binding To The T State
Of Aspartate Carbamoyltransferase. Crystal Structures Of
The Unligated And Atp-, And Ctp-Complexed Enzymes At
2.6-Angstroms Resolution
pdb|5AT1|C Chain C, Structural Consequences Of Effector Binding To The T State
Of Aspartate Carbamoyltransferase. Crystal Structures Of
The Unligated And Atp-, And Ctp-Complexed Enzymes At
2.6-Angstroms Resolution
pdb|6AT1|A Chain A, Structural Consequences Of Effector Binding To The T State
Of Aspartate Carbamoyltransferase. Crystal Structures Of
The Unligated And Atp-, And Ctp-Complexed Enzymes At
2.6-Angstroms Resolution
pdb|6AT1|C Chain C, Structural Consequences Of Effector Binding To The T State
Of Aspartate Carbamoyltransferase. Crystal Structures Of
The Unligated And Atp-, And Ctp-Complexed Enzymes At
2.6-Angstroms Resolution
pdb|7AT1|A Chain A, Crystal Structures Of Aspartate Carbamoyltransferase
Ligated With Phosphonoacetamide, Malonate, And Ctp Or
Atp At 2.8-angstroms Resolution And Neutral P*h
pdb|7AT1|C Chain C, Crystal Structures Of Aspartate Carbamoyltransferase
Ligated With Phosphonoacetamide, Malonate, And Ctp Or
Atp At 2.8-angstroms Resolution And Neutral P*h
pdb|8AT1|A Chain A, Crystal Structures Of Aspartate Carbamoyltransferase
Ligated With Phosphonoacetamide, Malonate, And Ctp Or
Atp At 2.8-Angstroms Resolution And Neutral PH
pdb|8AT1|C Chain C, Crystal Structures Of Aspartate Carbamoyltransferase
Ligated With Phosphonoacetamide, Malonate, And Ctp Or
Atp At 2.8-Angstroms Resolution And Neutral PH
pdb|8ATC|A Chain A, Complex Of N-Phosphonacetyl-L-Aspartate With Aspartate
Carbamoyltransferase. X-Ray Refinement, Analysis Of
Conformational Changes And Catalytic And Allosteric
Mechanisms
pdb|8ATC|C Chain C, Complex Of N-Phosphonacetyl-L-Aspartate With Aspartate
Carbamoyltransferase. X-Ray Refinement, Analysis Of
Conformational Changes And Catalytic And Allosteric
Mechanisms
pdb|1NBE|A Chain A, Aspartate Transcarbamoylase Regulatory Chain Mutant (T82a)
pdb|1NBE|C Chain C, Aspartate Transcarbamoylase Regulatory Chain Mutant (T82a)
Length = 310
Score = 26.6 bits (57), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 5 KCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLY 55
+ +L L Q+ E RL+ L VA+ D +H L++AL F + Y
Sbjct: 135 PTQTLLDLFTIQQTEGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFY 185
>pdb|3MPU|A Chain A, Crystal Structure Of The C47aA241C DISULFIDE-Linked E.
Coli Aspartate Transcarbamoylase Holoenzyme
pdb|3MPU|C Chain C, Crystal Structure Of The C47aA241C DISULFIDE-Linked E.
Coli Aspartate Transcarbamoylase Holoenzyme
pdb|3MPU|E Chain E, Crystal Structure Of The C47aA241C DISULFIDE-Linked E.
Coli Aspartate Transcarbamoylase Holoenzyme
pdb|3NPM|A Chain A, Crystal Structure Of The C47aA241C DISULFIDE-Linked C6
Aspartate Transcarbamoylase Enzyme
Length = 310
Score = 26.6 bits (57), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 5 KCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLY 55
+ +L L QE + RL+ L VA+ D +H L++AL F + Y
Sbjct: 135 PTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFY 185
>pdb|1TTH|A Chain A, Aspartate Transcarbamoylase Catalytic Chain Mutant
Glu50ala Complexed With N-(Phosphonacetyl-L-Aspartate)
(Pala)
pdb|1TTH|C Chain C, Aspartate Transcarbamoylase Catalytic Chain Mutant
Glu50ala Complexed With N-(Phosphonacetyl-L-Aspartate)
(Pala)
pdb|1TU0|A Chain A, Aspartate Transcarbamoylase Catalytic Chain Mutant E50a
Complex With Phosphonoacetamide
pdb|1TU0|C Chain C, Aspartate Transcarbamoylase Catalytic Chain Mutant E50a
Complex With Phosphonoacetamide
pdb|1TUG|A Chain A, Aspartate Transcarbamoylase Catalytic Chain Mutant E50a
Complex With Phosphonoacetamide, Malonate, And
Cytidine-5- Prime-Triphosphate (Ctp)
pdb|1TUG|C Chain C, Aspartate Transcarbamoylase Catalytic Chain Mutant E50a
Complex With Phosphonoacetamide, Malonate, And
Cytidine-5- Prime-Triphosphate (Ctp)
Length = 310
Score = 26.6 bits (57), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 5 KCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLY 55
+ +L L QE + RL+ L VA+ D +H L++AL F + Y
Sbjct: 135 PTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFY 185
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 26.6 bits (57), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 16/100 (16%)
Query: 23 EKLFVALDTDGNGKIDIHDLSKALK--------------DFGVHSLYAQKFLERSDSNRS 68
+++F DT NG + + ++AL F ++ L Q F+ER + +
Sbjct: 57 DRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQM 116
Query: 69 GDISLAEFIHYVKEH--EKHLRLGFSHLDKNQDGKIDLQE 106
+LAE +K+ E + F D DGKID +E
Sbjct: 117 VVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEE 156
>pdb|2A0F|A Chain A, Structure Of D236a Mutant E. Coli Aspartate
Transcarbamoylase In Presence Of Phosphonoacetamide At
2.90 A Resolution
pdb|2A0F|C Chain C, Structure Of D236a Mutant E. Coli Aspartate
Transcarbamoylase In Presence Of Phosphonoacetamide At
2.90 A Resolution
pdb|2HSE|A Chain A, Structure Of D236a E. Coli Aspartate Transcarbamoylase In
The Presence Of Phosphonoacetamide And L-Aspartate At
2.60 A Resolution
pdb|2HSE|C Chain C, Structure Of D236a E. Coli Aspartate Transcarbamoylase In
The Presence Of Phosphonoacetamide And L-Aspartate At
2.60 A Resolution
Length = 310
Score = 26.6 bits (57), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 5 KCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLY 55
+ +L L QE + RL+ L VA+ D +H L++AL F + Y
Sbjct: 135 PTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFY 185
>pdb|1ACM|A Chain A, Arginine 54 In The Active Site Of Escherichia Coli
Aspartate Transcarbamoylase Is Critical For Catalysis: A
Site-Specific Mutagenesis, Nmr And X-Ray Crystallography
Study
pdb|1ACM|C Chain C, Arginine 54 In The Active Site Of Escherichia Coli
Aspartate Transcarbamoylase Is Critical For Catalysis: A
Site-Specific Mutagenesis, Nmr And X-Ray Crystallography
Study
Length = 310
Score = 26.6 bits (57), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 5 KCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLY 55
+ +L L Q+ E RL+ L VA+ D +H L++AL F + Y
Sbjct: 135 PTQTLLDLFTIQQTEGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFY 185
>pdb|1I5O|A Chain A, Crystal Structure Of Mutant R105a Of E. Coli Aspartate
Transcarbamoylase
pdb|1I5O|C Chain C, Crystal Structure Of Mutant R105a Of E. Coli Aspartate
Transcarbamoylase
pdb|1GQ3|A Chain A, Structure Of The R105a Mutant Catalytic Trimer Of
Escherichia Coli Aspartate Transcarbamoylase At 2.0-A
Resolution
pdb|1GQ3|B Chain B, Structure Of The R105a Mutant Catalytic Trimer Of
Escherichia Coli Aspartate Transcarbamoylase At 2.0-A
Resolution
pdb|1GQ3|C Chain C, Structure Of The R105a Mutant Catalytic Trimer Of
Escherichia Coli Aspartate Transcarbamoylase At 2.0-A
Resolution
Length = 310
Score = 26.6 bits (57), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 5 KCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLY 55
+ +L L QE + RL+ L VA+ D +H L++AL F + Y
Sbjct: 135 PTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFY 185
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 26.2 bits (56), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 14/121 (11%)
Query: 20 ERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLYAQ--KFL--ERSDSNRSGDISLAE 75
E ++ F D G+GKI ++ G + A+ K L +SD +S +
Sbjct: 10 EEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFET 69
Query: 76 FIHYVK---------EHEKHLRLGFSHLDKNQDGKIDLQELQKAFQELGIDIDENEAKKL 126
F+ ++ +E +L GF DK +GK+ EL+ LG + E E + +
Sbjct: 70 FLPMLQAVAKNRGQGTYEDYLE-GFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETV 128
Query: 127 L 127
L
Sbjct: 129 L 129
>pdb|4E2F|I Chain I, Crystal Structure Of E. Coli Aspartate Transcarbamoylase
K164eE239K Mutant In An Intermediate State
pdb|4E2F|K Chain K, Crystal Structure Of E. Coli Aspartate Transcarbamoylase
K164eE239K Mutant In An Intermediate State
pdb|4E2F|G Chain G, Crystal Structure Of E. Coli Aspartate Transcarbamoylase
K164eE239K Mutant In An Intermediate State
pdb|4E2F|C Chain C, Crystal Structure Of E. Coli Aspartate Transcarbamoylase
K164eE239K Mutant In An Intermediate State
pdb|4E2F|A Chain A, Crystal Structure Of E. Coli Aspartate Transcarbamoylase
K164eE239K Mutant In An Intermediate State
pdb|4E2F|E Chain E, Crystal Structure Of E. Coli Aspartate Transcarbamoylase
K164eE239K Mutant In An Intermediate State
Length = 310
Score = 26.2 bits (56), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 5 KCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLY 55
+ +L L QE + RL+ L VA+ D +H L++AL F + Y
Sbjct: 135 PTQTLLDLFTIQETQGRLDNLHVAMVGDLEYGRTVHSLTQALAKFDGNRFY 185
>pdb|1EKX|A Chain A, The Isolated, Unregulated Catalytic Trimer Of Aspartate
Transcarbamoylase Complexed With Bisubstrate Analog Pala
(N-(Phosphonacetyl)-L-Aspartate)
pdb|1EKX|B Chain B, The Isolated, Unregulated Catalytic Trimer Of Aspartate
Transcarbamoylase Complexed With Bisubstrate Analog Pala
(N-(Phosphonacetyl)-L-Aspartate)
pdb|1EKX|C Chain C, The Isolated, Unregulated Catalytic Trimer Of Aspartate
Transcarbamoylase Complexed With Bisubstrate Analog Pala
(N-(Phosphonacetyl)-L-Aspartate)
Length = 311
Score = 26.2 bits (56), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 5 KCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLY 55
+ +L L QE + RL+ L VA+ D +H L++AL F + Y
Sbjct: 136 PTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFY 186
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 26.2 bits (56), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 91 FSHLDKNQDGKIDLQELQKAFQELG-IDIDENEAKKLLKRMDKDGSLEISFN 141
F+ +D+N DG ID +L++ F +G +++ E L M K+ S I+F
Sbjct: 31 FTVIDQNADGIIDKDDLRETFAAMGRLNVKNEE----LDAMIKEASGPINFT 78
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 26.2 bits (56), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 91 FSHLDKNQDGKIDLQELQKAFQELG-IDIDENEAKKLLKRMDKDGSLEISFN 141
F+ +D+N DG ID +L++ F +G +++ E L M K+ S I+F
Sbjct: 13 FTVIDQNADGIIDKDDLRETFAAMGRLNVKNEE----LDAMIKEASGPINFT 60
>pdb|9ATC|A Chain A, Atcase Y165f Mutant
Length = 310
Score = 26.2 bits (56), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 5 KCEAMLKLKLPQEDEERLEKLFVALDTDGNGKIDIHDLSKALKDFGVHSLY 55
+ +L L QE + RL+ L VA+ D +H L++AL F + Y
Sbjct: 135 PTQTLLDLFTIQETQGRLDNLHVAMVGDLKFGRTVHSLTQALAKFDGNRFY 185
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,272,765
Number of Sequences: 62578
Number of extensions: 224827
Number of successful extensions: 2000
Number of sequences better than 100.0: 358
Number of HSP's better than 100.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 1089
Number of HSP's gapped (non-prelim): 652
length of query: 171
length of database: 14,973,337
effective HSP length: 92
effective length of query: 79
effective length of database: 9,216,161
effective search space: 728076719
effective search space used: 728076719
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 48 (23.1 bits)