BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6886
(146 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1ZNQ|O Chain O, Crsytal Structure Of Human Liver Gapdh
pdb|1ZNQ|P Chain P, Crsytal Structure Of Human Liver Gapdh
pdb|1ZNQ|R Chain R, Crsytal Structure Of Human Liver Gapdh
pdb|1ZNQ|Q Chain Q, Crsytal Structure Of Human Liver Gapdh
Length = 338
Score = 120 bits (300), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 62/96 (64%)
Query: 51 VSNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXX 110
+N L LAKVIHDNF IVEGLM DGPSGKLWRDGRGA QNIIP
Sbjct: 156 TTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTG 215
Query: 111 XXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
IP LNGKLTGMAFRVP ANVSVVDLT R
Sbjct: 216 AAKAVGKVIPELNGKLTGMAFRVPTANVSVVDLTCR 251
Score = 25.8 bits (55), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 9/11 (81%), Positives = 11/11 (100%)
Query: 3 KIGINGFGRIG 13
K+G+NGFGRIG
Sbjct: 8 KVGVNGFGRIG 18
>pdb|1U8F|O Chain O, Crystal Structure Of Human Placental Glyceraldehyde-3-
Phosphate Dehydrogenase At 1.75 Resolution
pdb|1U8F|P Chain P, Crystal Structure Of Human Placental Glyceraldehyde-3-
Phosphate Dehydrogenase At 1.75 Resolution
pdb|1U8F|Q Chain Q, Crystal Structure Of Human Placental Glyceraldehyde-3-
Phosphate Dehydrogenase At 1.75 Resolution
pdb|1U8F|R Chain R, Crystal Structure Of Human Placental Glyceraldehyde-3-
Phosphate Dehydrogenase At 1.75 Resolution
Length = 335
Score = 119 bits (299), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 62/96 (64%)
Query: 51 VSNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXX 110
+N L LAKVIHDNF IVEGLM DGPSGKLWRDGRGA QNIIP
Sbjct: 153 TTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTG 212
Query: 111 XXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
IP LNGKLTGMAFRVP ANVSVVDLT R
Sbjct: 213 AAKAVGKVIPELNGKLTGMAFRVPTANVSVVDLTCR 248
Score = 25.8 bits (55), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 9/11 (81%), Positives = 11/11 (100%)
Query: 3 KIGINGFGRIG 13
K+G+NGFGRIG
Sbjct: 5 KVGVNGFGRIG 15
>pdb|1J0X|O Chain O, Crystal Structure Of The Rabbit Muscle Glyceraldehyde-3-
Phosphate Dehydrogenase (Gapdh)
pdb|1J0X|P Chain P, Crystal Structure Of The Rabbit Muscle Glyceraldehyde-3-
Phosphate Dehydrogenase (Gapdh)
pdb|1J0X|Q Chain Q, Crystal Structure Of The Rabbit Muscle Glyceraldehyde-3-
Phosphate Dehydrogenase (Gapdh)
pdb|1J0X|R Chain R, Crystal Structure Of The Rabbit Muscle Glyceraldehyde-3-
Phosphate Dehydrogenase (Gapdh)
Length = 332
Score = 118 bits (295), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 62/95 (65%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N L LAKVIHD+F IVEGLM DGPSGKLWRDGRGAAQNIIP
Sbjct: 151 TNCLAPLAKVIHDHFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGA 210
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
IP LNGKLTGMAFRVP NVSVVDLT R
Sbjct: 211 AKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCR 245
Score = 25.8 bits (55), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 9/11 (81%), Positives = 11/11 (100%)
Query: 3 KIGINGFGRIG 13
K+G+NGFGRIG
Sbjct: 2 KVGVNGFGRIG 12
>pdb|1IHX|A Chain A, Crystal Structure Of Two D-Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes: A Case Of Asymmetry
pdb|1IHX|B Chain B, Crystal Structure Of Two D-Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes: A Case Of Asymmetry
pdb|1IHX|C Chain C, Crystal Structure Of Two D-Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes: A Case Of Asymmetry
pdb|1IHX|D Chain D, Crystal Structure Of Two D-Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes: A Case Of Asymmetry
pdb|1IHY|A Chain A, Gapdh Complexed With Adp-Ribose
pdb|1IHY|B Chain B, Gapdh Complexed With Adp-Ribose
pdb|1IHY|C Chain C, Gapdh Complexed With Adp-Ribose
pdb|1IHY|D Chain D, Gapdh Complexed With Adp-Ribose
Length = 333
Score = 111 bits (278), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 61/95 (64%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N L +AKV+H+NFEIVEGLM DGPS K WR GRGAAQNIIP
Sbjct: 150 TNCLAPVAKVLHENFEIVEGLMTTVHAVTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGA 209
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
IP L+GKLTGMAFRVP NVSVVDLTVR
Sbjct: 210 AKAVGKVIPELDGKLTGMAFRVPTPNVSVVDLTVR 244
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/12 (100%), Positives = 12/12 (100%)
Query: 2 SKIGINGFGRIG 13
SKIGINGFGRIG
Sbjct: 1 SKIGINGFGRIG 12
>pdb|1SZJ|G Chain G, Structure Of Holo-Glyceraldehyde-3-Phosphate-Dehydrogenase
From Palinurus Versicolor Refined 2.0 Angstrom
Resolution
pdb|1SZJ|R Chain R, Structure Of Holo-Glyceraldehyde-3-Phosphate-Dehydrogenase
From Palinurus Versicolor Refined 2.0 Angstrom
Resolution
pdb|1CRW|G Chain G, Crystal Structure Of Apo-Glyceraldehyde-3-Phosphate
Dehydrogenase From Palinurus Versicolor At 2.0a
Resolution
pdb|1CRW|R Chain R, Crystal Structure Of Apo-Glyceraldehyde-3-Phosphate
Dehydrogenase From Palinurus Versicolor At 2.0a
Resolution
Length = 333
Score = 111 bits (278), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 61/95 (64%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N L +AKV+H+NFEIVEGLM DGPS K WR GRGAAQNIIP
Sbjct: 150 TNCLAPVAKVLHENFEIVEGLMTTVHAVTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGA 209
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
IP L+GKLTGMAFRVP NVSVVDLTVR
Sbjct: 210 AKAVGKVIPELDGKLTGMAFRVPTPNVSVVDLTVR 244
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/12 (100%), Positives = 12/12 (100%)
Query: 2 SKIGINGFGRIG 13
SKIGINGFGRIG
Sbjct: 1 SKIGINGFGRIG 12
>pdb|1DSS|G Chain G, Structure Of Active-Site Carboxymethylated
D-Glyceraldehyde-3- Phosphate Dehydrogenase From
Palinurus Versicolor
pdb|1DSS|R Chain R, Structure Of Active-Site Carboxymethylated
D-Glyceraldehyde-3- Phosphate Dehydrogenase From
Palinurus Versicolor
Length = 333
Score = 111 bits (278), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 61/95 (64%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N L +AKV+H+NFEIVEGLM DGPS K WR GRGAAQNIIP
Sbjct: 150 TNCLAPVAKVLHENFEIVEGLMTTVHAVTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGA 209
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
IP L+GKLTGMAFRVP NVSVVDLTVR
Sbjct: 210 AKAVGKVIPELDGKLTGMAFRVPTPNVSVVDLTVR 244
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/12 (100%), Positives = 12/12 (100%)
Query: 2 SKIGINGFGRIG 13
SKIGINGFGRIG
Sbjct: 1 SKIGINGFGRIG 12
>pdb|3GPD|R Chain R, Twinning In Crystals Of Human Skeletal Muscle
D-Glyceraldehyde-3- Phosphate Dehydrogenase
pdb|3GPD|G Chain G, Twinning In Crystals Of Human Skeletal Muscle
D-Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 334
Score = 111 bits (277), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 61/96 (63%)
Query: 51 VSNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXX 110
+N L LAKVIHD+F IVEGLM D PSGKLWR GRGAAQN+IP
Sbjct: 152 TTNCLAPLAKVIHDHFGIVEGLMTTVHAITATQKTVDSPSGKLWRGGRGAAQNLIPASTG 211
Query: 111 XXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
IP L+GKLTGMAFRVP ANVSV+DLT R
Sbjct: 212 AAKAVGKVIPELDGKLTGMAFRVPTANVSVLDLTCR 247
>pdb|1GPD|G Chain G, Studies Of Asymmetry In The Three-Dimensional Structure Of
Lobster D- Glyceraldehyde-3-Phosphate Dehydrogenase
pdb|1GPD|R Chain R, Studies Of Asymmetry In The Three-Dimensional Structure Of
Lobster D- Glyceraldehyde-3-Phosphate Dehydrogenase
Length = 334
Score = 110 bits (274), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 61/95 (64%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N L +AKV+H+NFEIVEGLM DGPS K WR GRGAAQNIIP
Sbjct: 151 TNCLAPVAKVLHENFEIVEGLMTTVHAVTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGA 210
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
IP L+GKLTGMAFRVP +VSVVDLTVR
Sbjct: 211 AKAVGKVIPELDGKLTGMAFRVPTPDVSVVDLTVR 245
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/12 (100%), Positives = 12/12 (100%)
Query: 2 SKIGINGFGRIG 13
SKIGINGFGRIG
Sbjct: 2 SKIGINGFGRIG 13
>pdb|4GPD|1 Chain 1, The Structure Of Lobster Apo-D-Glyceraldehyde-3-Phosphate
Dehydrogenase At 3.0 Angstroms Resolution
pdb|4GPD|2 Chain 2, The Structure Of Lobster Apo-D-Glyceraldehyde-3-Phosphate
Dehydrogenase At 3.0 Angstroms Resolution
pdb|4GPD|3 Chain 3, The Structure Of Lobster Apo-D-Glyceraldehyde-3-Phosphate
Dehydrogenase At 3.0 Angstroms Resolution
pdb|4GPD|4 Chain 4, The Structure Of Lobster Apo-D-Glyceraldehyde-3-Phosphate
Dehydrogenase At 3.0 Angstroms Resolution
Length = 333
Score = 110 bits (274), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 61/95 (64%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N L +AKV+H+NFEIVEGLM DGPS K WR GRGAAQNIIP
Sbjct: 150 TNCLAPVAKVLHENFEIVEGLMTTVHAVTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGA 209
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
IP L+GKLTGMAFRVP +VSVVDLTVR
Sbjct: 210 AKAVGKVIPELDGKLTGMAFRVPTPDVSVVDLTVR 244
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/12 (100%), Positives = 12/12 (100%)
Query: 2 SKIGINGFGRIG 13
SKIGINGFGRIG
Sbjct: 1 SKIGINGFGRIG 12
>pdb|1GAE|O Chain O, Comparison Of The Structures Of Wild Type And A N313t
Mutant Of Escherichia Coli Glyceraldehyde 3-Phosphate
Dehydrogenases: Implication For Nad Binding And
Cooperativity
pdb|1GAE|P Chain P, Comparison Of The Structures Of Wild Type And A N313t
Mutant Of Escherichia Coli Glyceraldehyde 3-Phosphate
Dehydrogenases: Implication For Nad Binding And
Cooperativity
Length = 330
Score = 107 bits (266), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 60/95 (63%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N L LAKVI+DNF I+EGLM DGPS K WR GRGA+QNIIP
Sbjct: 151 TNCLAPLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGA 210
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
+P LNGKLTGMAFRVP NVSVVDLTVR
Sbjct: 211 AKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVR 245
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 10/11 (90%), Positives = 11/11 (100%)
Query: 3 KIGINGFGRIG 13
K+GINGFGRIG
Sbjct: 3 KVGINGFGRIG 13
>pdb|1GAD|O Chain O, Comparison Of The Structures Of Wild Type And A N313t
Mutant Of Escherichia Coli Glyceraldehyde 3-Phosphate
Dehydrogenases: Implication For Nad Binding And
Cooperativity
pdb|1GAD|P Chain P, Comparison Of The Structures Of Wild Type And A N313t
Mutant Of Escherichia Coli Glyceraldehyde 3-Phosphate
Dehydrogenases: Implication For Nad Binding And
Cooperativity
pdb|1DC3|A Chain A, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
pdb|1DC3|B Chain B, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
pdb|1DC5|A Chain A, Structural Analysis Of Glyceraldehyde 3-phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor- Induced Conformational
Changes
pdb|1DC5|B Chain B, Structural Analysis Of Glyceraldehyde 3-phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor- Induced Conformational
Changes
pdb|1DC6|A Chain A, Structural Analysis Of Glyceraldehyde 3-phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor- Induced Conformational
Changes.
pdb|1DC6|B Chain B, Structural Analysis Of Glyceraldehyde 3-phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor- Induced Conformational
Changes
Length = 330
Score = 107 bits (266), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 60/96 (62%)
Query: 51 VSNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXX 110
+N L LAKVI+DNF I+EGLM DGPS K WR GRGA+QNIIP
Sbjct: 150 TTNCLAPLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTG 209
Query: 111 XXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
+P LNGKLTGMAFRVP NVSVVDLTVR
Sbjct: 210 AAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVR 245
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/11 (90%), Positives = 11/11 (100%)
Query: 3 KIGINGFGRIG 13
K+GINGFGRIG
Sbjct: 3 KVGINGFGRIG 13
>pdb|1S7C|A Chain A, Crystal Structure Of Mes Buffer Bound Form Of
Glyceraldehyde 3- Phosphate Dehydrogenase From
Escherichia Coli
Length = 331
Score = 107 bits (266), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 60/96 (62%)
Query: 51 VSNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXX 110
+N L LAKVI+DNF I+EGLM DGPS K WR GRGA+QNIIP
Sbjct: 151 TTNCLAPLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTG 210
Query: 111 XXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
+P LNGKLTGMAFRVP NVSVVDLTVR
Sbjct: 211 AAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVR 246
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/11 (90%), Positives = 11/11 (100%)
Query: 3 KIGINGFGRIG 13
K+GINGFGRIG
Sbjct: 4 KVGINGFGRIG 14
>pdb|2VYN|A Chain A, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYN|B Chain B, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYN|C Chain C, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYV|A Chain A, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYV|B Chain B, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYV|C Chain C, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
Length = 331
Score = 106 bits (265), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 60/95 (63%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N L LAKVI+DNF I+EGLM DGPS K WR GRGA+QNIIP
Sbjct: 152 TNCLAPLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGA 211
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
+P LNGKLTGMAFRVP NVSVVDLTVR
Sbjct: 212 AKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVR 246
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 10/11 (90%), Positives = 11/11 (100%)
Query: 3 KIGINGFGRIG 13
K+GINGFGRIG
Sbjct: 4 KVGINGFGRIG 14
>pdb|3H9E|A Chain A, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3- Phosphate Dehydrogenase (Gapds)
Complex With Nad And Phosphate
pdb|3H9E|B Chain B, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3- Phosphate Dehydrogenase (Gapds)
Complex With Nad And Phosphate
pdb|3PFW|O Chain O, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapds) Complex
With Nad, A Binary Form
pdb|3PFW|P Chain P, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapds) Complex
With Nad, A Binary Form
pdb|3H9E|O Chain O, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapds) Complex
With Nad And Phosphate
pdb|3H9E|P Chain P, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapds) Complex
With Nad And Phosphate
Length = 346
Score = 106 bits (264), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 57/95 (60%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N L LAKVIH+ F IVEGLM DGPS K WRDGRGA QNIIP
Sbjct: 158 TNCLAPLAKVIHERFGIVEGLMTTVHSYTATQKTVDGPSRKAWRDGRGAHQNIIPASTGA 217
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
IP L GKLTGMAFRVP +VSVVDLT R
Sbjct: 218 AKAVTKVIPELKGKLTGMAFRVPTPDVSVVDLTCR 252
>pdb|2VYN|D Chain D, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYV|D Chain D, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
Length = 334
Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 57/95 (60%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N L LAKVIH+ F IVEGLM DGPS K WR GRGA QNIIP
Sbjct: 152 TNCLAPLAKVIHERFGIVEGLMTTVHAYTATQKTVDGPSKKDWRGGRGAHQNIIPSSTGA 211
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
IP LNGKLTGMAFRVP NVSVVDLT R
Sbjct: 212 AKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCR 246
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/13 (84%), Positives = 12/13 (92%)
Query: 1 MSKIGINGFGRIG 13
M K+GINGFGRIG
Sbjct: 1 MVKVGINGFGRIG 13
>pdb|3E5R|O Chain O, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E5R|A Chain A, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E5R|B Chain B, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E5R|C Chain C, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3V1Y|O Chain O, Crystal Structures Of Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes With Nad
pdb|3V1Y|A Chain A, Crystal Structures Of Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes With Nad
pdb|3V1Y|B Chain B, Crystal Structures Of Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes With Nad
pdb|3V1Y|C Chain C, Crystal Structures Of Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes With Nad
Length = 337
Score = 102 bits (253), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 58/95 (61%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N L LAKVIHDNF I+EGLM DGPS K WR GR A+ NIIP
Sbjct: 156 TNCLAPLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGA 215
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
+P LNGKLTGM+FRVP +VSVVDLTVR
Sbjct: 216 AKAVGKVLPDLNGKLTGMSFRVPTVDVSVVDLTVR 250
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/11 (100%), Positives = 11/11 (100%)
Query: 3 KIGINGFGRIG 13
KIGINGFGRIG
Sbjct: 5 KIGINGFGRIG 15
>pdb|3E6A|O Chain O, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E6A|A Chain A, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E6A|B Chain B, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E6A|C Chain C, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
Length = 336
Score = 102 bits (253), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 58/95 (61%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N L LAKVIHDNF I+EGLM DGPS K WR GR A+ NIIP
Sbjct: 155 TNCLAPLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGA 214
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
+P LNGKLTGM+FRVP +VSVVDLTVR
Sbjct: 215 AKAVGKVLPDLNGKLTGMSFRVPTVDVSVVDLTVR 249
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/11 (100%), Positives = 11/11 (100%)
Query: 3 KIGINGFGRIG 13
KIGINGFGRIG
Sbjct: 4 KIGINGFGRIG 14
>pdb|1DC4|A Chain A, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
pdb|1DC4|B Chain B, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
Length = 330
Score = 99.8 bits (247), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 58/96 (60%)
Query: 51 VSNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXX 110
+N L LAKVI+DNF I+EGL DGPS K WR GRGA+QNIIP
Sbjct: 150 TTNCLAPLAKVINDNFGIIEGLXTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTG 209
Query: 111 XXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
+P LNGKLTG AFRVP NVSVVDLTVR
Sbjct: 210 AAKAVGKVLPELNGKLTGXAFRVPTPNVSVVDLTVR 245
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 10/11 (90%), Positives = 11/11 (100%)
Query: 3 KIGINGFGRIG 13
K+GINGFGRIG
Sbjct: 3 KVGINGFGRIG 13
>pdb|3CIF|A Chain A, Crystal Structure Of C153s Mutant Glyceraldehyde
3-Phosphate Dehydrogenase From Cryptosporidium Parvum
pdb|3CIF|B Chain B, Crystal Structure Of C153s Mutant Glyceraldehyde
3-Phosphate Dehydrogenase From Cryptosporidium Parvum
pdb|3CIF|C Chain C, Crystal Structure Of C153s Mutant Glyceraldehyde
3-Phosphate Dehydrogenase From Cryptosporidium Parvum
pdb|3CIF|D Chain D, Crystal Structure Of C153s Mutant Glyceraldehyde
3-Phosphate Dehydrogenase From Cryptosporidium Parvum
Length = 359
Score = 92.4 bits (228), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 50 TVSNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPS--GKLWRDGRGAAQNIIPX 107
+ +N L LAK+I+D F IVEGLM DGPS GK WR GR A NIIP
Sbjct: 173 STTNCLAPLAKIINDKFGIVEGLMTTVHSLTANQLTVDGPSKGGKDWRAGRCAGNNIIPA 232
Query: 108 XXXXXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
IPALNGKLTGMA RVP +VSVVDLT +
Sbjct: 233 STGAAKAVGKVIPALNGKLTGMAIRVPTPDVSVVDLTCK 271
>pdb|3CPS|A Chain A, Crystal Structure Of Cryptosporidium Parvum
Glyceraldehyde-3-Phosphate Dehydrogenase
pdb|3CPS|B Chain B, Crystal Structure Of Cryptosporidium Parvum
Glyceraldehyde-3-Phosphate Dehydrogenase
Length = 354
Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 51 VSNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPS--GKLWRDGRGAAQNIIPXX 108
+N L LAK+I+D F IVEGLM DGPS GK WR GR A NIIP
Sbjct: 169 TTNCLAPLAKIINDKFGIVEGLMTTVHSLTANQLTVDGPSKGGKDWRAGRCAGNNIIPAS 228
Query: 109 XXXXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
IPALNGKLTGMA RVP +VSVVDLT +
Sbjct: 229 TGAAKAVGKVIPALNGKLTGMAIRVPTPDVSVVDLTCK 266
>pdb|1VSU|A Chain A, Crystal Structure Of Apo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSU|B Chain B, Crystal Structure Of Apo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSU|C Chain C, Crystal Structure Of Apo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSU|D Chain D, Crystal Structure Of Apo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSV|A Chain A, Crystal Structure Of Holo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSV|B Chain B, Crystal Structure Of Holo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSV|C Chain C, Crystal Structure Of Holo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSV|D Chain D, Crystal Structure Of Holo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
Length = 359
Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPS--GKLWRDGRGAAQNIIPXXX 109
+N L LAK+I+D F IVEGLM DGPS GK WR GR A NIIP
Sbjct: 175 TNCLAPLAKIINDKFGIVEGLMTTVHSLTANQLTVDGPSKGGKDWRAGRCAGNNIIPAST 234
Query: 110 XXXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
IPALNGKLTGMA RVP +VSVVDLT +
Sbjct: 235 GAAKAVGKVIPALNGKLTGMAIRVPTPDVSVVDLTCK 271
>pdb|3PYM|A Chain A, Structure Of Gapdh 3 From S.Cerevisiae At 2.0 A Resolution
pdb|3PYM|B Chain B, Structure Of Gapdh 3 From S.Cerevisiae At 2.0 A Resolution
Length = 332
Score = 91.7 bits (226), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 55/95 (57%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N L LAKVI+D F I EGLM DGPS K WR GR A+ NIIP
Sbjct: 152 TNCLAPLAKVINDAFGIEEGLMTTVHSLTATQKTVDGPSHKDWRGGRTASGNIIPSSTGA 211
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
+P L GKLTGMAFRVP +VSVVDLTV+
Sbjct: 212 AKAVGKVLPELQGKLTGMAFRVPTVDVSVVDLTVK 246
>pdb|4IQ8|A Chain A, Crystal Structure Of Glyceraldehyde-3-phosphate
Dehydrogenase 3 From Saccharomyces Cerevisiae
Length = 340
Score = 91.7 bits (226), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 55/95 (57%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N L LAKVI+D F I EGLM DGPS K WR GR A+ NIIP
Sbjct: 160 TNCLAPLAKVINDAFGIEEGLMTTVHSLTATQKTVDGPSHKDWRGGRTASGNIIPSSTGA 219
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
+P L GKLTGMAFRVP +VSVVDLTV+
Sbjct: 220 AKAVGKVLPELQGKLTGMAFRVPTVDVSVVDLTVK 254
>pdb|2I5P|O Chain O, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Isoform 1 From K. Marxianus
pdb|2I5P|P Chain P, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Isoform 1 From K. Marxianus
Length = 342
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 55/95 (57%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N L +AK+I+D F I EGLM DGPS K WR GR A+ NIIP
Sbjct: 164 TNCLAPIAKIINDEFGIEEGLMTTVHSITATQKTVDGPSHKDWRGGRTASGNIIPSSTGA 223
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
+P L GKLTGMAFRVP +VSVVDLTV+
Sbjct: 224 AKAVGKVLPELQGKLTGMAFRVPTTDVSVVDLTVK 258
>pdb|2B4R|O Chain O, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4R|P Chain P, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4R|Q Chain Q, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4R|R Chain R, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4T|O Chain O, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4T|P Chain P, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4T|Q Chain Q, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4T|R Chain R, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
Length = 345
Score = 89.0 bits (219), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPS--GKLWRDGRGAAQNIIPXXX 109
+N L LAKVI+D F IVEGLM DGPS GK WR GR A NIIP
Sbjct: 163 TNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPAST 222
Query: 110 XXXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
+P LNGKLTG+AFRVP+ VSVVDL R
Sbjct: 223 GAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCR 259
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 10/12 (83%), Positives = 12/12 (100%)
Query: 2 SKIGINGFGRIG 13
+K+GINGFGRIG
Sbjct: 12 TKLGINGFGRIG 23
>pdb|1YWG|O Chain O, The Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase
From Plasmodium Falciparum
pdb|1YWG|P Chain P, The Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase
From Plasmodium Falciparum
pdb|1YWG|Q Chain Q, The Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase
From Plasmodium Falciparum
pdb|1YWG|R Chain R, The Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase
From Plasmodium Falciparum
Length = 337
Score = 89.0 bits (219), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPS--GKLWRDGRGAAQNIIPXXX 109
+N L LAKVI+D F IVEGLM DGPS GK WR GR A NIIP
Sbjct: 155 TNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPAST 214
Query: 110 XXXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
+P LNGKLTG+AFRVP+ VSVVDL R
Sbjct: 215 GAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCR 251
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 10/13 (76%), Positives = 13/13 (100%)
Query: 1 MSKIGINGFGRIG 13
++K+GINGFGRIG
Sbjct: 3 VTKLGINGFGRIG 15
>pdb|3STH|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
pdb|3STH|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
pdb|3STH|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
pdb|3STH|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
Length = 361
Score = 79.3 bits (194), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 51 VSNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPS--GKLWRDGRGAAQNIIPXX 108
+N L LAK++HD F IVEGLM DGPS GK WR GR A NIIP
Sbjct: 174 TTNCLAPLAKIVHDKFGIVEGLMTTVHAMTANQLTVDGPSKGGKDWRAGRSAGVNIIPAS 233
Query: 109 XXXXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
IP+LNGKLTGMAFRVPV +VSVVDLT +
Sbjct: 234 TGAAKAVGKIIPSLNGKLTGMAFRVPVPDVSVVDLTCK 271
Score = 26.2 bits (56), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 10/13 (76%), Positives = 12/13 (92%)
Query: 1 MSKIGINGFGRIG 13
+ K+GINGFGRIG
Sbjct: 23 VCKLGINGFGRIG 35
>pdb|2X0N|A Chain A, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|B Chain B, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|O Chain O, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|P Chain P, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|Q Chain Q, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|R Chain R, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
Length = 359
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 43 PREPSFVT----VSNSLLTLAKV-IHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDG 97
PRE V+ +N L L V + + F I GLM DG S K WR G
Sbjct: 155 PREQHVVSNASCTTNCLAPLVHVLVKEGFGISTGLMTTVHSYTATQKTVDGVSVKDWRGG 214
Query: 98 RGAAQNIIPXXXXXXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLT 144
R AA NIIP IP+ GKLTGMAFRVP A+VSVVDLT
Sbjct: 215 RAAALNIIPSTTGAAKAVGMVIPSTQGKLTGMAFRVPTADVSVVDLT 261
Score = 26.6 bits (57), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/11 (90%), Positives = 11/11 (100%)
Query: 3 KIGINGFGRIG 13
K+GINGFGRIG
Sbjct: 4 KVGINGFGRIG 14
>pdb|1A7K|A Chain A, Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase In A
Monoclinic Crystal Form
pdb|1A7K|B Chain B, Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase In A
Monoclinic Crystal Form
pdb|1A7K|C Chain C, Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase In A
Monoclinic Crystal Form
pdb|1A7K|D Chain D, Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase In A
Monoclinic Crystal Form
pdb|1I32|A Chain A, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|B Chain B, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|C Chain C, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|D Chain D, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|E Chain E, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|F Chain F, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|A Chain A, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|B Chain B, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|C Chain C, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|D Chain D, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|E Chain E, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|F Chain F, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
Length = 360
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 47 SFVTVSNSLLT---LAKVIH----DNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRG 99
S VSN+ T LA ++H +NF I GLM DG S K WR GR
Sbjct: 157 SHHVVSNASCTTNCLAPIVHVLTKENFGIETGLMTTIHSYTATQKTVDGVSLKDWRGGRA 216
Query: 100 AAQNIIPXXXXXXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
AA NIIP IP+ GKLTGM+FRVP +VSVVDLT R
Sbjct: 217 AAVNIIPSTTGAAKAVGMVIPSTKGKLTGMSFRVPTPDVSVVDLTFR 263
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 10/11 (90%), Positives = 11/11 (100%)
Query: 3 KIGINGFGRIG 13
K+GINGFGRIG
Sbjct: 4 KVGINGFGRIG 14
>pdb|1GYP|A Chain A, Crystal Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Leishmania Mexicana: Implications For
Structure-Based Drug Design And A New Position For The
Inorganic Phosphate Binding Site
pdb|1GYP|B Chain B, Crystal Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Leishmania Mexicana: Implications For
Structure-Based Drug Design And A New Position For The
Inorganic Phosphate Binding Site
pdb|1GYP|C Chain C, Crystal Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Leishmania Mexicana: Implications For
Structure-Based Drug Design And A New Position For The
Inorganic Phosphate Binding Site
pdb|1GYP|D Chain D, Crystal Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Leishmania Mexicana: Implications For
Structure-Based Drug Design And A New Position For The
Inorganic Phosphate Binding Site
pdb|1GYQ|A Chain A, Crystal Structure Of Glycosomal Glyceraldehyde From
Leishmania Mexicana In Complex With N6-Benzyl-Nad
pdb|1GYQ|B Chain B, Crystal Structure Of Glycosomal Glyceraldehyde From
Leishmania Mexicana In Complex With N6-Benzyl-Nad
pdb|1GYQ|C Chain C, Crystal Structure Of Glycosomal Glyceraldehyde From
Leishmania Mexicana In Complex With N6-Benzyl-Nad
pdb|1GYQ|D Chain D, Crystal Structure Of Glycosomal Glyceraldehyde From
Leishmania Mexicana In Complex With N6-Benzyl-Nad
Length = 358
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 47 SFVTVSNSLLT---LAKVIH----DNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRG 99
S VSN+ T LA ++H +NF I GLM DG S K WR GR
Sbjct: 157 SHHVVSNASCTTNCLAPIVHVLTKENFGIETGLMTTIHSYTATQKTVDGVSLKDWRGGRA 216
Query: 100 AAQNIIPXXXXXXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
AA NIIP IP+ GKLTGM+FRVP +VSVVDLT R
Sbjct: 217 AAVNIIPSTTGAAKAVGMVIPSTKGKLTGMSFRVPTPDVSVVDLTFR 263
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 10/11 (90%), Positives = 11/11 (100%)
Query: 3 KIGINGFGRIG 13
K+GINGFGRIG
Sbjct: 4 KVGINGFGRIG 14
>pdb|1K3T|A Chain A, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi Complexed With
Chalepin, A Coumarin Derivative Inhibitor
pdb|1K3T|B Chain B, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi Complexed With
Chalepin, A Coumarin Derivative Inhibitor
pdb|1K3T|C Chain C, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi Complexed With
Chalepin, A Coumarin Derivative Inhibitor
pdb|1K3T|D Chain D, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi Complexed With
Chalepin, A Coumarin Derivative Inhibitor
pdb|1ML3|A Chain A, Evidences For A Flip-Flop Catalytic Mechanism Of
Trypanosoma Cruzi Glyceraldehyde-3-Phosphate
Dehydrogenase, From Its Crystal Structure In Complex
With Reacted Irreversible Inhibitor
2-(2-Phosphono-Ethyl)-Acrylic Acid 4-Nitro-Phenyl Ester
pdb|1ML3|B Chain B, Evidences For A Flip-Flop Catalytic Mechanism Of
Trypanosoma Cruzi Glyceraldehyde-3-Phosphate
Dehydrogenase, From Its Crystal Structure In Complex
With Reacted Irreversible Inhibitor
2-(2-Phosphono-Ethyl)-Acrylic Acid 4-Nitro-Phenyl Ester
pdb|1ML3|C Chain C, Evidences For A Flip-Flop Catalytic Mechanism Of
Trypanosoma Cruzi Glyceraldehyde-3-Phosphate
Dehydrogenase, From Its Crystal Structure In Complex
With Reacted Irreversible Inhibitor
2-(2-Phosphono-Ethyl)-Acrylic Acid 4-Nitro-Phenyl Ester
pdb|1ML3|D Chain D, Evidences For A Flip-Flop Catalytic Mechanism Of
Trypanosoma Cruzi Glyceraldehyde-3-Phosphate
Dehydrogenase, From Its Crystal Structure In Complex
With Reacted Irreversible Inhibitor
2-(2-Phosphono-Ethyl)-Acrylic Acid 4-Nitro-Phenyl Ester
pdb|1QXS|C Chain C, Crystal Structure Of Trypanosoma Cruzi Glyceraldehyde-3-
Phosphate Dehydrogenase Complexed With An Analogue Of
1,3- Bisphospho-D-Glyceric Acid
pdb|1QXS|D Chain D, Crystal Structure Of Trypanosoma Cruzi Glyceraldehyde-3-
Phosphate Dehydrogenase Complexed With An Analogue Of
1,3- Bisphospho-D-Glyceric Acid
pdb|1QXS|A Chain A, Crystal Structure Of Trypanosoma Cruzi Glyceraldehyde-3-
Phosphate Dehydrogenase Complexed With An Analogue Of
1,3- Bisphospho-D-Glyceric Acid
pdb|1QXS|B Chain B, Crystal Structure Of Trypanosoma Cruzi Glyceraldehyde-3-
Phosphate Dehydrogenase Complexed With An Analogue Of
1,3- Bisphospho-D-Glyceric Acid
pdb|3DMT|A Chain A, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetate Inhibitor
pdb|3DMT|B Chain B, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetate Inhibitor
pdb|3DMT|D Chain D, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetate Inhibitor
pdb|3IDS|C Chain C, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetamide Inhibitor
pdb|3IDS|D Chain D, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetamide Inhibitor
pdb|3IDS|A Chain A, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetamide Inhibitor
pdb|3IDS|B Chain B, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetamide Inhibitor
Length = 359
Score = 72.4 bits (176), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 51 VSNSLLT---LAKVIH----DNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQN 103
VSN+ T LA ++H + F + GLM DG S K WR GR AA N
Sbjct: 161 VSNASCTTNCLAPIVHVLVKEGFGVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVN 220
Query: 104 IIPXXXXXXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLT 144
IIP IP+ GKLTGM+FRVP +VSVVDLT
Sbjct: 221 IIPSTTGAAKAVGMVIPSTQGKLTGMSFRVPTPDVSVVDLT 261
Score = 26.6 bits (57), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/11 (90%), Positives = 11/11 (100%)
Query: 3 KIGINGFGRIG 13
K+GINGFGRIG
Sbjct: 4 KVGINGFGRIG 14
>pdb|3DMT|C Chain C, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetate Inhibitor
Length = 359
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 51 VSNSLLT---LAKVIH----DNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQN 103
VSN+ T LA ++H + F + GLM DG S K WR GR AA N
Sbjct: 161 VSNASXTTNCLAPIVHVLVKEGFGVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVN 220
Query: 104 IIPXXXXXXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLT 144
IIP IP+ GKLTGM+FRVP +VSVVDLT
Sbjct: 221 IIPSTTGAAKAVGMVIPSTQGKLTGMSFRVPTPDVSVVDLT 261
Score = 26.6 bits (57), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/11 (90%), Positives = 11/11 (100%)
Query: 3 KIGINGFGRIG 13
K+GINGFGRIG
Sbjct: 4 KVGINGFGRIG 14
>pdb|1NQ5|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+
pdb|1NQ5|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+
pdb|1NQ5|A Chain A, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+
pdb|1NQ5|C Chain C, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+
pdb|1NQO|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+ And
D-Glyceraldehyde-3-Phosphate
pdb|1NQO|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+ And
D-Glyceraldehyde-3-Phosphate
pdb|1NQO|A Chain A, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+ And
D-Glyceraldehyde-3-Phosphate
pdb|1NQO|C Chain C, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+ And
D-Glyceraldehyde-3-Phosphate
Length = 334
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 50 TVSNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXX 109
+ +N L AKV+H+ F IV G+M D P L R R AA++IIP
Sbjct: 151 STTNCLAPFAKVLHEQFGIVRGMMTTVHSYTNDQRILDLPHKDLRR-ARAAAESIIPTTT 209
Query: 110 XXXXXXXXXIPALNGKLTGMAFRVPVANVSVVDL 143
+P L GKL GMA RVP NVSVVDL
Sbjct: 210 GAAKAVALVLPELKGKLNGMAMRVPTPNVSVVDL 243
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/13 (84%), Positives = 12/13 (92%)
Query: 3 KIGINGFGRIGLN 15
K+GINGFGRIG N
Sbjct: 3 KVGINGFGRIGRN 15
>pdb|1GD1|O Chain O, Structure Of Holo-Glyceraldehyde-3-Phosphate Dehydrogenase
From Bacillus Stearothermophilus At 1.8 Angstroms
Resolution
pdb|1GD1|P Chain P, Structure Of Holo-Glyceraldehyde-3-Phosphate Dehydrogenase
From Bacillus Stearothermophilus At 1.8 Angstroms
Resolution
pdb|1GD1|Q Chain Q, Structure Of Holo-Glyceraldehyde-3-Phosphate Dehydrogenase
From Bacillus Stearothermophilus At 1.8 Angstroms
Resolution
pdb|1GD1|R Chain R, Structure Of Holo-Glyceraldehyde-3-Phosphate Dehydrogenase
From Bacillus Stearothermophilus At 1.8 Angstroms
Resolution
pdb|2GD1|O Chain O, Coenzyme-Induced Conformational Changes In
Glyceraldehyde-3- Phosphate Dehydrogenase From Bacillus
Stearothermophillus
pdb|2GD1|P Chain P, Coenzyme-Induced Conformational Changes In
Glyceraldehyde-3- Phosphate Dehydrogenase From Bacillus
Stearothermophillus
pdb|2GD1|Q Chain Q, Coenzyme-Induced Conformational Changes In
Glyceraldehyde-3- Phosphate Dehydrogenase From Bacillus
Stearothermophillus
pdb|2GD1|R Chain R, Coenzyme-Induced Conformational Changes In
Glyceraldehyde-3- Phosphate Dehydrogenase From Bacillus
Stearothermophillus
pdb|3CMC|O Chain O, Thioacylenzyme Intermediate Of Bacillus Stearothermophilus
Phosphorylating Gapdh
pdb|3CMC|P Chain P, Thioacylenzyme Intermediate Of Bacillus Stearothermophilus
Phosphorylating Gapdh
pdb|3CMC|Q Chain Q, Thioacylenzyme Intermediate Of Bacillus Stearothermophilus
Phosphorylating Gapdh
pdb|3CMC|R Chain R, Thioacylenzyme Intermediate Of Bacillus Stearothermophilus
Phosphorylating Gapdh
Length = 334
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N L AKV+H+ F IV G+M D P L R R AA++IIP
Sbjct: 153 TNCLAPFAKVLHEQFGIVRGMMTTVHSYTNDQRILDLPHKDLRR-ARAAAESIIPTTTGA 211
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDL 143
+P L GKL GMA RVP NVSVVDL
Sbjct: 212 AKAVALVLPELKGKLNGMAMRVPTPNVSVVDL 243
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/13 (84%), Positives = 12/13 (92%)
Query: 3 KIGINGFGRIGLN 15
K+GINGFGRIG N
Sbjct: 3 KVGINGFGRIGRN 15
>pdb|1NPT|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+
pdb|1NPT|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+
pdb|1NPT|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+
pdb|1NPT|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+
pdb|1NQA|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+ And D-
Glyceraldehyde-3-Phosphate
pdb|1NQA|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+ And D-
Glyceraldehyde-3-Phosphate
pdb|1NQA|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+ And D-
Glyceraldehyde-3-Phosphate
pdb|1NQA|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+ And D-
Glyceraldehyde-3-Phosphate
Length = 334
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N L AKV+H+ F IV G+M D P L R R AA++IIP
Sbjct: 153 TNCLAPFAKVLHEQFGIVRGMMTTVHSYTNDQRILDLPHKDLRR-ARAAAESIIPTTTGA 211
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDL 143
+P L GKL GMA RVP NVSVVDL
Sbjct: 212 AKAVALVLPELKGKLNGMAMRVPTPNVSVVDL 243
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/13 (84%), Positives = 12/13 (92%)
Query: 3 KIGINGFGRIGLN 15
K+GINGFGRIG N
Sbjct: 3 KVGINGFGRIGRN 15
>pdb|1DBV|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|1DBV|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|1DBV|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|1DBV|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|2DBV|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|2DBV|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|2DBV|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|2DBV|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
Length = 334
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N L AKV+H+ F IV G+M D S K R R AA++IIP
Sbjct: 153 TNCLAPFAKVLHEQFGIVRGMMTTVHSYTNDQRILDA-SHKDLRRARAAAESIIPTTTGA 211
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDL 143
+P L GKL GMA RVP NVSVVDL
Sbjct: 212 AKAVALVLPELKGKLNGMAMRVPTPNVSVVDL 243
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/13 (84%), Positives = 12/13 (92%)
Query: 3 KIGINGFGRIGLN 15
K+GINGFGRIG N
Sbjct: 3 KVGINGFGRIGRN 15
>pdb|3DBV|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|3DBV|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|3DBV|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|3DBV|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|4DBV|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|4DBV|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|4DBV|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|4DBV|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
Length = 334
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N L AKV+H+ F IV G+M D S K R R AA++IIP
Sbjct: 153 TNCLAPFAKVLHEQFGIVRGMMTTVHSYTNDQRILDA-SHKDLRRARAAAESIIPTTTGA 211
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDL 143
+P L GKL GMA RVP NVSVVDL
Sbjct: 212 AKAVALVLPELKGKLNGMAMRVPTPNVSVVDL 243
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/13 (84%), Positives = 12/13 (92%)
Query: 3 KIGINGFGRIGLN 15
K+GINGFGRIG N
Sbjct: 3 KVGINGFGRIGRN 15
>pdb|3HQ4|R Chain R, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh1)
Complexed With Nad From Staphylococcus Aureus Mrsa252 At
2.2 Angstrom Resolution
pdb|3HQ4|O Chain O, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh1)
Complexed With Nad From Staphylococcus Aureus Mrsa252 At
2.2 Angstrom Resolution
pdb|3HQ4|P Chain P, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh1)
Complexed With Nad From Staphylococcus Aureus Mrsa252 At
2.2 Angstrom Resolution
pdb|3HQ4|Q Chain Q, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh1)
Complexed With Nad From Staphylococcus Aureus Mrsa252 At
2.2 Angstrom Resolution
pdb|3KV3|O Chain O, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh 1)from
Methicillin Resistant Staphylococcus Aureus Mrsa252
Complexed With Nad And G3p
pdb|3KV3|Q Chain Q, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh 1)from
Methicillin Resistant Staphylococcus Aureus Mrsa252
Complexed With Nad And G3p
pdb|3KV3|R Chain R, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh 1)from
Methicillin Resistant Staphylococcus Aureus Mrsa252
Complexed With Nad And G3p
pdb|3KV3|P Chain P, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh 1)from
Methicillin Resistant Staphylococcus Aureus Mrsa252
Complexed With Nad And G3p
Length = 336
Score = 65.9 bits (159), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 50 TVSNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGK-LWRDGRGAAQNIIPXX 108
+ +NSL +AKV++D+F +VEGLM D P K R R AA+NIIP
Sbjct: 151 STTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNS 210
Query: 109 XXXXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTV 145
IP ++GKL G A RVPVA S+ +LTV
Sbjct: 211 TGAAKAIGKVIPEIDGKLDGGAQRVPVATGSLTELTV 247
>pdb|3KSD|Q Chain Q, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-phosphate Dehydrogenase 1 (gapdh1) From
Staphylococcus Aureus Mrsa252 Complexed With Nad At 2.2
Angstrom Resolution
pdb|3KSD|R Chain R, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-phosphate Dehydrogenase 1 (gapdh1) From
Staphylococcus Aureus Mrsa252 Complexed With Nad At 2.2
Angstrom Resolution
pdb|3KSD|O Chain O, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-phosphate Dehydrogenase 1 (gapdh1) From
Staphylococcus Aureus Mrsa252 Complexed With Nad At 2.2
Angstrom Resolution
pdb|3KSD|P Chain P, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-phosphate Dehydrogenase 1 (gapdh1) From
Staphylococcus Aureus Mrsa252 Complexed With Nad At 2.2
Angstrom Resolution
pdb|3KSZ|O Chain O, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad
And G3p
pdb|3KSZ|P Chain P, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad
And G3p
pdb|3KSZ|R Chain R, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad
And G3p
pdb|3KSZ|Q Chain Q, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad
And G3p
Length = 336
Score = 65.9 bits (159), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 50 TVSNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGK-LWRDGRGAAQNIIPXX 108
+ +NSL +AKV++D+F +VEGLM D P K R R AA+NIIP
Sbjct: 151 STTNSLAPVAKVLNDDFGLVEGLMTTINAYTGDQNTQDAPHRKGDKRRARAAAENIIPNS 210
Query: 109 XXXXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTV 145
IP ++GKL G A RVPVA S+ +LTV
Sbjct: 211 TGAAKAIGKVIPEIDGKLDGGAQRVPVATGSLTELTV 247
>pdb|3VAZ|P Chain P, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|R Chain R, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|O Chain O, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|Q Chain Q, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|B Chain B, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|A Chain A, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
Length = 344
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 51 VSNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGK-LWRDGRGAAQNIIPXXX 109
+NSL +AKV++D+F +VEGLM D P K R R AA+NIIP
Sbjct: 160 TTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNST 219
Query: 110 XXXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTV 145
IP ++GKL G A RVPVA S+ +LTV
Sbjct: 220 GAAKAIGKVIPEIDGKLDGGAQRVPVATGSLTELTV 255
>pdb|3LVF|P Chain P, Crystal Structure Of Holo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252 At 1.7 Angstrom Resolution
pdb|3LVF|R Chain R, Crystal Structure Of Holo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252 At 1.7 Angstrom Resolution
pdb|3LVF|O Chain O, Crystal Structure Of Holo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252 At 1.7 Angstrom Resolution
pdb|3LVF|Q Chain Q, Crystal Structure Of Holo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252 At 1.7 Angstrom Resolution
Length = 338
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 51 VSNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGK-LWRDGRGAAQNIIPXXX 109
+NSL +AKV++D+F +VEGLM D P K R R AA+NIIP
Sbjct: 154 TTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNST 213
Query: 110 XXXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTV 145
IP ++GKL G A RVPVA S+ +LTV
Sbjct: 214 GAAKAIGKVIPEIDGKLDGGAQRVPVATGSLTELTV 249
>pdb|3LC7|O Chain O, Crystal Structure Of Apo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicllin Resistant
Staphylococcus Aureus (Mrsa252)
pdb|3LC7|R Chain R, Crystal Structure Of Apo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicllin Resistant
Staphylococcus Aureus (Mrsa252)
pdb|3LC7|Q Chain Q, Crystal Structure Of Apo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicllin Resistant
Staphylococcus Aureus (Mrsa252)
pdb|3LC7|P Chain P, Crystal Structure Of Apo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicllin Resistant
Staphylococcus Aureus (Mrsa252)
Length = 339
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 51 VSNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGK-LWRDGRGAAQNIIPXXX 109
+NSL +AKV++D+F +VEGLM D P K R R AA+NIIP
Sbjct: 155 TTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNST 214
Query: 110 XXXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTV 145
IP ++GKL G A RVPVA S+ +LTV
Sbjct: 215 GAAKAIGKVIPEIDGKLDGGAQRVPVATGSLTELTV 250
>pdb|3K9Q|Q Chain Q, Crsytal Strcuture Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 From Methicillin Resistant
Staphylococcus Aureus (Mrsa252) At 2.5 Angstrom
Resolution
pdb|3K9Q|O Chain O, Crsytal Strcuture Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 From Methicillin Resistant
Staphylococcus Aureus (Mrsa252) At 2.5 Angstrom
Resolution
pdb|3K9Q|P Chain P, Crsytal Strcuture Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 From Methicillin Resistant
Staphylococcus Aureus (Mrsa252) At 2.5 Angstrom
Resolution
pdb|3K9Q|R Chain R, Crsytal Strcuture Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 From Methicillin Resistant
Staphylococcus Aureus (Mrsa252) At 2.5 Angstrom
Resolution
pdb|3L4S|Q Chain Q, Crystal Structure Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 (Gapdh1) From Methicillin
Resistant Staphylococcus Aureus Mrsa252 Complexed With
Nad And G3p
pdb|3L4S|P Chain P, Crystal Structure Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 (Gapdh1) From Methicillin
Resistant Staphylococcus Aureus Mrsa252 Complexed With
Nad And G3p
pdb|3L4S|O Chain O, Crystal Structure Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 (Gapdh1) From Methicillin
Resistant Staphylococcus Aureus Mrsa252 Complexed With
Nad And G3p
pdb|3L4S|R Chain R, Crystal Structure Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 (Gapdh1) From Methicillin
Resistant Staphylococcus Aureus Mrsa252 Complexed With
Nad And G3p
Length = 336
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 51 VSNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGK-LWRDGRGAAQNIIPXXX 109
+NSL +AKV++D+F +VEGLM D P K R R AA+NIIP
Sbjct: 152 TTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNST 211
Query: 110 XXXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTV 145
IP ++GKL G A RVPVA S+ +LTV
Sbjct: 212 GAAKAIGKVIPEIDGKLDGGAQRVPVATGSLTELTV 247
>pdb|3K73|Q Chain Q, Crystal Structure Of Phosphate Bound Holo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.5 Angstrom Resolution
pdb|3K73|O Chain O, Crystal Structure Of Phosphate Bound Holo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.5 Angstrom Resolution
pdb|3K73|P Chain P, Crystal Structure Of Phosphate Bound Holo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.5 Angstrom Resolution
pdb|3K73|R Chain R, Crystal Structure Of Phosphate Bound Holo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.5 Angstrom Resolution
pdb|3L6O|Q Chain Q, Crystal Structure Of Phosphate Bound Apo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.2 Angstrom Resolution
pdb|3L6O|P Chain P, Crystal Structure Of Phosphate Bound Apo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.2 Angstrom Resolution
pdb|3L6O|R Chain R, Crystal Structure Of Phosphate Bound Apo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.2 Angstrom Resolution
pdb|3L6O|O Chain O, Crystal Structure Of Phosphate Bound Apo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.2 Angstrom Resolution
pdb|3LC2|O Chain O, Crystal Structure Of Thioacyl-Glyceraldehyde-3-Phosphate
Dehydrogenase 1(Gapdh 1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252
pdb|3LC2|Q Chain Q, Crystal Structure Of Thioacyl-Glyceraldehyde-3-Phosphate
Dehydrogenase 1(Gapdh 1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252
pdb|3LC2|R Chain R, Crystal Structure Of Thioacyl-Glyceraldehyde-3-Phosphate
Dehydrogenase 1(Gapdh 1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252
pdb|3LC2|P Chain P, Crystal Structure Of Thioacyl-Glyceraldehyde-3-Phosphate
Dehydrogenase 1(Gapdh 1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252
Length = 336
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 51 VSNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGK-LWRDGRGAAQNIIPXXX 109
+NSL +AKV++D+F +VEGLM D P K R R AA+NIIP
Sbjct: 152 TTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNST 211
Query: 110 XXXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTV 145
IP ++GKL G A RVPVA S+ +LTV
Sbjct: 212 GAAKAIGKVIPEIDGKLDGGAQRVPVATGSLTELTV 247
>pdb|3LC1|P Chain P, Crystal Structure Of H178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad At
2.0 Angstrom Resolution.
pdb|3LC1|R Chain R, Crystal Structure Of H178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad At
2.0 Angstrom Resolution.
pdb|3LC1|O Chain O, Crystal Structure Of H178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad At
2.0 Angstrom Resolution.
pdb|3LC1|Q Chain Q, Crystal Structure Of H178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad At
2.0 Angstrom Resolution
Length = 336
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 51 VSNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGK-LWRDGRGAAQNIIPXXX 109
+NSL +AKV++D+F +VEGLM D P K R R AA+NIIP
Sbjct: 152 TTNSLAPVAKVLNDDFGLVEGLMTTINAYTGDQNTQDAPHRKGDKRRARAAAENIIPNST 211
Query: 110 XXXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTV 145
IP ++GKL G A RVPVA S+ +LTV
Sbjct: 212 GAAKAIGKVIPEIDGKLDGGAQRVPVATGSLTELTV 247
>pdb|3HJA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Borrelia Burgdorferi
pdb|3HJA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Borrelia Burgdorferi
pdb|3HJA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Borrelia Burgdorferi
pdb|3HJA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Borrelia Burgdorferi
Length = 356
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 51 VSNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXX 110
+N L LAKV+H++F I +GLM D P L R R AA +IIP
Sbjct: 175 TTNCLAPLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPHSDLRR-ARAAALSIIPTSTG 233
Query: 111 XXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTVR 146
+P L GKL G + RVPV S+VDLTV+
Sbjct: 234 AAKAVGLVLPELKGKLNGTSMRVPVPTGSIVDLTVQ 269
>pdb|1HDG|O Chain O, The Crystal Structure Of Holo-glyceraldehyde-3-phosphate
Dehydrogenase From The Hyperthermophilic Bacterium
Thermotoga Maritima At 2.5 Angstroms Resolution
pdb|1HDG|Q Chain Q, The Crystal Structure Of Holo-glyceraldehyde-3-phosphate
Dehydrogenase From The Hyperthermophilic Bacterium
Thermotoga Maritima At 2.5 Angstroms Resolution
Length = 332
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+NS+ + KV+H+ F IV G++ D P L R R AA NIIP
Sbjct: 153 TNSIAPIVKVLHEKFGIVSGMLTTVHSYTNDQRVLDLPHKDLRR-ARAAAVNIIPTTTGA 211
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTV 145
+P + GKL GMA RVP + S+ DLTV
Sbjct: 212 AKAVALVVPEVKGKLDGMAIRVPTPDGSITDLTV 245
>pdb|3DOC|A Chain A, Crystal Structure Of Trka Glyceraldehyde-3-Phosphate
Dehydrogenase From Brucella Melitensis
pdb|3DOC|B Chain B, Crystal Structure Of Trka Glyceraldehyde-3-Phosphate
Dehydrogenase From Brucella Melitensis
pdb|3DOC|C Chain C, Crystal Structure Of Trka Glyceraldehyde-3-Phosphate
Dehydrogenase From Brucella Melitensis
pdb|3DOC|D Chain D, Crystal Structure Of Trka Glyceraldehyde-3-Phosphate
Dehydrogenase From Brucella Melitensis
Length = 335
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N L +A+V++D I +G M D L+R R AA ++IP
Sbjct: 155 TNCLAPVAQVLNDTIGIEKGFMTTIHSYTGDQPTLDTMHKDLYR-ARAAALSMIPTSTGA 213
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDLT 144
+P L GKL G+A RVP NVSVVDLT
Sbjct: 214 AKAVGLVLPELKGKLDGVAIRVPTPNVSVVDLT 246
>pdb|2EP7|A Chain A, Structural Study Of Project Id Aq_1065 From Aquifex
Aeolicus Vf5
pdb|2EP7|B Chain B, Structural Study Of Project Id Aq_1065 From Aquifex
Aeolicus Vf5
Length = 342
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Query: 38 SELLLPREPSFVT----VSNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKL 93
E P+E + ++ +N L KV+++ F + +G M D P K
Sbjct: 136 EEKYNPKEHNIISNASCTTNCLAPCVKVLNEAFGVEKGYMVTVHAYTNDQRLLDLPH-KD 194
Query: 94 WRDGRGAAQNIIPXXXXXXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTV 145
+R R AA NI+P IP L GKL G A RVPV + S++DLTV
Sbjct: 195 FRRARAAAINIVPTTTGAAKAIGEVIPELKGKLDGTARRVPVPDGSLIDLTV 246
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 10/11 (90%), Positives = 11/11 (100%)
Query: 3 KIGINGFGRIG 13
K+GINGFGRIG
Sbjct: 4 KVGINGFGRIG 14
>pdb|4DIB|A Chain A, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|B Chain B, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|C Chain C, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|D Chain D, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|E Chain E, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|F Chain F, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|G Chain G, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|H Chain H, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
Length = 345
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N L + KV+ + F I GLM D P L R R Q+IIP
Sbjct: 156 TNCLAPVVKVLDEQFGIENGLMTTVHAYTNDQKNIDNPHKDL-RRARACGQSIIPTTTGA 214
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVAN 137
+P LNGKL GMA RVP N
Sbjct: 215 AKALAKVLPHLNGKLHGMALRVPTPN 240
>pdb|1CER|O Chain O, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|P Chain P, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|Q Chain Q, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|R Chain R, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|A Chain A, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|B Chain B, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|C Chain C, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|D Chain D, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
Length = 331
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+NSL + KV+ + F + + LM D P L R R AA NIIP
Sbjct: 151 TNSLAPVMKVLEEAFGVEKALMTTVHSYTNDQRLLDLPHKDL-RRARAAAINIIPTTTGA 209
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDLT 144
+P+L G+ GMA RVP A S+ D+T
Sbjct: 210 AKATALVLPSLKGRFDGMALRVPTATGSISDIT 242
Score = 26.9 bits (58), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/11 (90%), Positives = 11/11 (100%)
Query: 3 KIGINGFGRIG 13
K+GINGFGRIG
Sbjct: 2 KVGINGFGRIG 12
>pdb|2G82|O Chain O, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|P Chain P, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|Q Chain Q, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|R Chain R, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|A Chain A, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|B Chain B, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|C Chain C, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|D Chain D, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
Length = 331
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+NSL + KV+ + F + + LM D P L R R AA NIIP
Sbjct: 151 TNSLAPVMKVLEEAFGVEKALMTTVHSYTNDQRLLDLPHKDL-RRARAAAINIIPTTTGA 209
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDLT 144
+P+L G+ GMA RVP A S+ D+T
Sbjct: 210 AKATALVLPSLKGRFDGMALRVPTATGSISDIT 242
Score = 26.9 bits (58), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/11 (90%), Positives = 11/11 (100%)
Query: 3 KIGINGFGRIG 13
K+GINGFGRIG
Sbjct: 2 KVGINGFGRIG 12
>pdb|3L0D|A Chain A, Crystal Structure Of Glyceraldehyde-3-phosphate
Dehydrogenase From Bartonella Henselae With Bound Nad
pdb|3L0D|B Chain B, Crystal Structure Of Glyceraldehyde-3-phosphate
Dehydrogenase From Bartonella Henselae With Bound Nad
Length = 356
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N L +A+V+H+ I +G M D L+R R AA ++IP
Sbjct: 176 TNCLAPVAQVLHNTVGIEKGFMTTIHSYTGDQPVLDTMHRDLYR-ARAAALSMIPTSTGA 234
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDLT 144
+P L G L G++ RVP NVSVVDLT
Sbjct: 235 AKAVGLVLPELKGLLDGVSIRVPTPNVSVVDLT 267
>pdb|3B1J|A Chain A, Crystal Structure Of Dehydrogenese
pdb|3B1J|B Chain B, Crystal Structure Of Dehydrogenese
pdb|3B1K|A Chain A, Crystal Structure Of Dehydrogenese In The Absence Of
Copper
pdb|3B1K|B Chain B, Crystal Structure Of Dehydrogenese In The Absence Of
Copper
pdb|3B1K|G Chain G, Crystal Structure Of Dehydrogenese In The Absence Of
Copper
pdb|3B1K|H Chain H, Crystal Structure Of Dehydrogenese In The Absence Of
Copper
pdb|3B20|A Chain A, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|B Chain B, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|O Chain O, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|P Chain P, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|Q Chain Q, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|R Chain R, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
Length = 339
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 44/100 (44%), Gaps = 7/100 (7%)
Query: 44 REPSFVTVSNSLLT------LAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDG 97
R F +SN+ T +AKV+HDNF I++G M D L R
Sbjct: 143 RHEDFAVISNASCTTNCLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASHRDL-RRA 201
Query: 98 RGAAQNIIPXXXXXXXXXXXXIPALNGKLTGMAFRVPVAN 137
R AA NI+P IP L GKL G+A RVP N
Sbjct: 202 RAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVPTPN 241
>pdb|2D2I|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|B Chain B, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|O Chain O, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|P Chain P, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|Q Chain Q, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|R Chain R, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2DUU|A Chain A, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|B Chain B, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|O Chain O, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|P Chain P, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|Q Chain Q, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|R Chain R, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp
Length = 380
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 44/100 (44%), Gaps = 7/100 (7%)
Query: 44 REPSFVTVSNSLLT------LAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDG 97
R F +SN+ T +AKV+HDNF I++G M D L R
Sbjct: 143 RHEDFAVISNASCTTNCLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASHRDL-RRA 201
Query: 98 RGAAQNIIPXXXXXXXXXXXXIPALNGKLTGMAFRVPVAN 137
R AA NI+P IP L GKL G+A RVP N
Sbjct: 202 RAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVPTPN 241
>pdb|1VC2|A Chain A, Crystal Structure Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Thermus Thermophilus Hb8
Length = 331
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+NSL + KV+ F + + LM D P L R R AA NIIP
Sbjct: 151 TNSLAPVMKVLEKAFGVEKALMTTVHSYTNDQRLLDLPHKDL-RRARAAALNIIPTTTGA 209
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDLT 144
+P+L G+ GMA RVP S+ D+T
Sbjct: 210 AKATALVLPSLKGRFDGMALRVPTPTGSISDIT 242
Score = 26.6 bits (57), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/11 (90%), Positives = 11/11 (100%)
Query: 3 KIGINGFGRIG 13
K+GINGFGRIG
Sbjct: 2 KVGINGFGRIG 12
>pdb|1OBF|O Chain O, The Crystal Structure Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Alcaligenes Xylosoxidans At 1.7
Resolution.
pdb|1OBF|P Chain P, The Crystal Structure Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Alcaligenes Xylosoxidans At 1.7
Resolution
Length = 335
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 51 VSNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXX 110
+N L L K ++D + +GLM D L R R A ++IP
Sbjct: 155 TTNCLAPLVKPLNDKLGLQDGLMTTVHAYTNNQVLTDVYHEDL-RRARSATMSMIPTKTG 213
Query: 111 XXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLT 144
+P L+GKL G A RVP NVS+VDL+
Sbjct: 214 AAAAVGDVLPELDGKLNGYAIRVPTINVSIVDLS 247
>pdb|3GNQ|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|E Chain E, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|F Chain F, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|G Chain G, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|H Chain H, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
Length = 344
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Query: 51 VSNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXX 110
+N L L K ++D + GLM D L R R A + IP
Sbjct: 164 TTNCLAPLVKPLNDKIGLETGLMTTIHAYTNDQVLTDVYHEDL-RRARSATHSQIPTKTG 222
Query: 111 XXXXXXXXIPALNGKLTGMAFRVPVANVSVVDLT 144
+P LNGKL G A RVP NVS+VDL+
Sbjct: 223 AAAAVGLVLPELNGKLDGYAIRVPTINVSIVDLS 256
>pdb|2PKQ|O Chain O, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKQ|Q Chain Q, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKQ|T Chain T, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
Length = 368
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N L KV+ + IV+G M D S + R R AA NI+P
Sbjct: 157 TNCLAPFVKVLDEELGIVKGTMTTTHSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTGA 215
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTV 145
+P L GKL G+A RVP NVSVVDL V
Sbjct: 216 AKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVV 249
Score = 25.8 bits (55), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 3 KIGINGFGRIGLNNL 17
K+ INGFGRIG N L
Sbjct: 3 KVAINGFGRIGRNFL 17
>pdb|1JN0|O Chain O, Crystal Structure Of The Non-Regulatory A4 Isoform Of
Spinach Chloroplast Glyceraldehyde-3-Phosphate
Dehydrogenase Complexed With Nadp
pdb|1JN0|A Chain A, Crystal Structure Of The Non-Regulatory A4 Isoform Of
Spinach Chloroplast Glyceraldehyde-3-Phosphate
Dehydrogenase Complexed With Nadp
pdb|1JN0|B Chain B, Crystal Structure Of The Non-Regulatory A4 Isoform Of
Spinach Chloroplast Glyceraldehyde-3-Phosphate
Dehydrogenase Complexed With Nadp
Length = 335
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N L KV+ F I++G M D L R R A NI+P
Sbjct: 153 TNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDL-RRARAACLNIVPTSTGA 211
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVAN 137
+P L GKL G+A RVP N
Sbjct: 212 AKAVALVLPQLKGKLNGIALRVPTPN 237
Score = 26.2 bits (56), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 3 KIGINGFGRIGLNNL 17
K+ INGFGRIG N L
Sbjct: 3 KVAINGFGRIGRNFL 17
>pdb|2PKR|O Chain O, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|R Chain R, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|P Chain P, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|Q Chain Q, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|A Chain A, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|B Chain B, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|C Chain C, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|D Chain D, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|H Chain H, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|I Chain I, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|L Chain L, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|M Chain M, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
Length = 365
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
Query: 51 VSNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXX 110
+N L KV+ F I++G M D L R R A NI+P
Sbjct: 154 TTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDL-RRARAACLNIVPTSTG 212
Query: 111 XXXXXXXXIPALNGKLTGMAFRVPVAN 137
+P L GKL G+A RVP N
Sbjct: 213 AAKAVALVLPNLKGKLNGIALRVPTPN 239
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 3 KIGINGFGRIGLNNL 17
K+ INGFGRIG N L
Sbjct: 3 KVAINGFGRIGRNFL 17
>pdb|1RM5|O Chain O, Crystal Structure Of Mutant S188a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM5|A Chain A, Crystal Structure Of Mutant S188a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM5|B Chain B, Crystal Structure Of Mutant S188a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
Length = 337
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N L KV+ F I++G M D L R R A NI+P
Sbjct: 155 TNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDAAHRDL-RRARAACLNIVPTSTGA 213
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVAN 137
+P L GKL G+A RVP N
Sbjct: 214 AKAVALVLPNLKGKLNGIALRVPTPN 239
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 3 KIGINGFGRIGLNNL 17
K+ INGFGRIG N L
Sbjct: 3 KVAINGFGRIGRNFL 17
>pdb|1NBO|O Chain O, The Dual Coenzyme Specificity Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase Interpreted By
The Crystal Structure Of A4 Isoform Complexed With Nad
pdb|1NBO|A Chain A, The Dual Coenzyme Specificity Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase Interpreted By
The Crystal Structure Of A4 Isoform Complexed With Nad
pdb|1NBO|B Chain B, The Dual Coenzyme Specificity Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase Interpreted By
The Crystal Structure Of A4 Isoform Complexed With Nad
pdb|1RM4|O Chain O, Crystal Structure Of Recombinant Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM4|A Chain A, Crystal Structure Of Recombinant Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM4|B Chain B, Crystal Structure Of Recombinant Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|2HKI|A Chain A, Crystal Structure Of Photosynthetic
Glyceraldehyde-3-Phosphate Dehydrogenase A4 Isoform
pdb|2PKQ|P Chain P, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKQ|R Chain R, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKQ|S Chain S, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
Length = 337
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N L KV+ F I++G M D L R R A NI+P
Sbjct: 155 TNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDL-RRARAACLNIVPTSTGA 213
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVAN 137
+P L GKL G+A RVP N
Sbjct: 214 AKAVALVLPNLKGKLNGIALRVPTPN 239
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 3 KIGINGFGRIGLNNL 17
K+ INGFGRIG N L
Sbjct: 3 KVAINGFGRIGRNFL 17
>pdb|1RM3|O Chain O, Crystal Structure Of Mutant T33a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM3|A Chain A, Crystal Structure Of Mutant T33a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM3|B Chain B, Crystal Structure Of Mutant T33a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
Length = 337
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N L KV+ F I++G M D L R R A NI+P
Sbjct: 155 TNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDL-RRARAACLNIVPTSTGA 213
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVAN 137
+P L GKL G+A RVP N
Sbjct: 214 AKAVALVLPNLKGKLNGIALRVPTPN 239
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 3 KIGINGFGRIGLNNL 17
K+ INGFGRIG N L
Sbjct: 3 KVAINGFGRIGRNFL 17
>pdb|2X5K|O Chain O, Structure Of An Active Site Mutant Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5K|P Chain P, Structure Of An Active Site Mutant Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5K|Q Chain Q, Structure Of An Active Site Mutant Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5K|R Chain R, Structure Of An Active Site Mutant Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
Length = 339
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+NS++ + K++ D + I G + D L R R A+Q+IIP
Sbjct: 157 TNSIIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDL-RRTRAASQSIIPVDTKL 215
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTV 145
P N + +A RVP NV+ +DL+V
Sbjct: 216 AAGITRFFPQFNDRFEAIAVRVPTINVTAIDLSV 249
>pdb|2XF8|A Chain A, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|B Chain B, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|C Chain C, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|D Chain D, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|E Chain E, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|F Chain F, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|G Chain G, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|H Chain H, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|I Chain I, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|J Chain J, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|K Chain K, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|L Chain L, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|M Chain M, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|N Chain N, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|O Chain O, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|P Chain P, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
Length = 338
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N ++ + K++ D + I G + D L R R A+Q+IIP
Sbjct: 156 TNCIIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDL-RRTRAASQSIIPVDTKL 214
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTV 145
P N + +A RVP NV+ +DL+V
Sbjct: 215 AAGITRFFPQFNDRFEAIAVRVPTINVTAIDLSV 248
>pdb|2X5J|O Chain O, Crystal Structure Of The Apoform Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5J|P Chain P, Crystal Structure Of The Apoform Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5J|Q Chain Q, Crystal Structure Of The Apoform Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5J|R Chain R, Crystal Structure Of The Apoform Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
Length = 339
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Query: 52 SNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXXX 111
+N ++ + K++ D + I G + D L R R A+Q+IIP
Sbjct: 157 TNCIIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDL-RRTRAASQSIIPVDTKL 215
Query: 112 XXXXXXXIPALNGKLTGMAFRVPVANVSVVDLTV 145
P N + +A RVP NV+ +DL+V
Sbjct: 216 AAGITRFFPQFNDRFEAIAVRVPTINVTAIDLSV 249
>pdb|3K2B|A Chain A, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|B Chain B, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|C Chain C, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|D Chain D, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|E Chain E, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|F Chain F, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|G Chain G, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|H Chain H, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|O Chain O, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|Q Chain Q, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3QV1|A Chain A, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|B Chain B, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|C Chain C, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|D Chain D, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|E Chain E, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|F Chain F, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3RVD|A Chain A, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|B Chain B, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|C Chain C, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|D Chain D, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|E Chain E, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|F Chain F, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|G Chain G, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|H Chain H, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|O Chain O, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|Q Chain Q, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana
Length = 337
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Query: 51 VSNSLLTLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWRDGRGAAQNIIPXXXX 110
+N L KV+ F I++G M D S + R R AA NI+P
Sbjct: 155 TTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTG 213
Query: 111 XXXXXXXXIPALNGKLTGMAFRVPVAN 137
+P L GKL G+A RVP N
Sbjct: 214 AAKAVALVLPNLKGKLNGIALRVPTPN 240
Score = 26.2 bits (56), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 3 KIGINGFGRIGLNNL 17
K+ INGFGRIG N L
Sbjct: 4 KVAINGFGRIGRNFL 18
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.139 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,025,374
Number of Sequences: 62578
Number of extensions: 77293
Number of successful extensions: 229
Number of sequences better than 100.0: 68
Number of HSP's better than 100.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69
Number of HSP's gapped (non-prelim): 136
length of query: 146
length of database: 14,973,337
effective HSP length: 90
effective length of query: 56
effective length of database: 9,341,317
effective search space: 523113752
effective search space used: 523113752
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 46 (22.3 bits)