Query psy6886
Match_columns 146
No_of_seqs 211 out of 1366
Neff 5.9
Searched_HMMs 29240
Date Fri Aug 16 21:00:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6886.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6886hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pym_A GAPDH 3, glyceraldehyde 100.0 2.4E-55 8.4E-60 369.5 6.9 145 1-146 1-246 (332)
2 3lvf_P GAPDH 1, glyceraldehyde 100.0 2.1E-54 7.1E-59 364.5 8.2 145 1-146 4-250 (338)
3 4dib_A GAPDH, glyceraldehyde 3 100.0 1.3E-54 4.4E-59 366.5 5.8 144 1-146 4-249 (345)
4 3v1y_O PP38, glyceraldehyde-3- 100.0 2E-54 6.7E-59 364.6 6.7 145 1-146 3-250 (337)
5 3ids_C GAPDH, glyceraldehyde-3 100.0 2.6E-54 8.9E-59 366.2 6.4 145 1-146 2-263 (359)
6 3doc_A Glyceraldehyde 3-phosph 100.0 1.1E-53 3.8E-58 359.8 6.7 144 1-146 2-248 (335)
7 3h9e_O Glyceraldehyde-3-phosph 100.0 2E-53 6.7E-58 359.6 6.2 144 1-146 7-252 (346)
8 3hja_A GAPDH, glyceraldehyde-3 100.0 1.8E-51 6.2E-56 348.5 7.0 143 2-146 22-269 (356)
9 2ep7_A GAPDH, glyceraldehyde-3 100.0 1.1E-50 3.8E-55 342.5 8.1 143 2-146 3-247 (342)
10 1obf_O Glyceraldehyde 3-phosph 100.0 2.2E-49 7.6E-54 333.8 6.8 144 1-146 1-249 (335)
11 2b4r_O Glyceraldehyde-3-phosph 100.0 4.5E-49 1.6E-53 333.0 6.0 144 2-146 12-259 (345)
12 2d2i_A Glyceraldehyde 3-phosph 100.0 1.8E-44 6E-49 308.3 6.8 144 1-146 2-250 (380)
13 1rm4_O Glyceraldehyde 3-phosph 100.0 3.5E-44 1.2E-48 302.2 6.8 144 1-146 1-248 (337)
14 2g82_O GAPDH, glyceraldehyde-3 100.0 6.3E-44 2.2E-48 300.0 6.8 142 2-146 1-244 (331)
15 3b1j_A Glyceraldehyde 3-phosph 100.0 4.4E-43 1.5E-47 295.5 6.8 144 1-146 2-250 (339)
16 3cps_A Glyceraldehyde 3-phosph 100.0 2.7E-42 9.3E-47 292.4 6.7 145 1-146 17-266 (354)
17 3e5r_O PP38, glyceraldehyde-3- 100.0 6.5E-42 2.2E-46 288.0 6.7 144 2-146 4-250 (337)
18 1gad_O D-glyceraldehyde-3-phos 100.0 1.4E-41 4.8E-46 285.3 7.1 145 1-146 1-245 (330)
19 3cmc_O GAPDH, glyceraldehyde-3 100.0 1.8E-41 6.3E-46 285.1 6.8 144 1-146 1-246 (334)
20 1u8f_O GAPDH, glyceraldehyde-3 100.0 8.1E-41 2.8E-45 280.7 7.0 145 1-146 3-248 (335)
21 1hdg_O Holo-D-glyceraldehyde-3 100.0 1.9E-40 6.4E-45 278.8 6.8 143 2-146 1-246 (332)
22 2x5j_O E4PDH, D-erythrose-4-ph 100.0 7.9E-40 2.7E-44 275.5 5.0 144 1-146 2-250 (339)
23 2yyy_A Glyceraldehyde-3-phosph 100.0 2.4E-33 8.1E-38 236.2 5.0 89 47-146 141-233 (343)
24 1b7g_O Protein (glyceraldehyde 99.9 1.5E-25 5.2E-30 187.9 5.2 88 46-146 135-226 (340)
25 2czc_A Glyceraldehyde-3-phosph 99.9 3.5E-23 1.2E-27 172.5 5.6 83 47-145 138-223 (334)
26 2r00_A Aspartate-semialdehyde 99.9 1.7E-23 5.9E-28 175.1 3.2 100 47-146 128-251 (336)
27 1cf2_P Protein (glyceraldehyde 99.8 4.8E-22 1.6E-26 166.5 4.9 86 47-146 137-226 (337)
28 2yv3_A Aspartate-semialdehyde 99.8 4.1E-20 1.4E-24 154.5 2.3 99 46-146 121-245 (331)
29 2hjs_A USG-1 protein homolog; 99.7 2E-19 6.8E-24 150.7 -0.2 101 46-146 129-253 (340)
30 2ep5_A 350AA long hypothetical 99.7 4.5E-18 1.5E-22 142.7 1.5 92 46-145 147-250 (350)
31 2ozp_A N-acetyl-gamma-glutamyl 99.6 6.6E-17 2.2E-21 135.6 2.9 90 46-145 145-243 (345)
32 1t4b_A Aspartate-semialdehyde 99.5 2.3E-15 7.8E-20 127.5 2.3 100 46-145 131-280 (367)
33 1xyg_A Putative N-acetyl-gamma 99.3 9E-14 3.1E-18 117.1 0.5 90 46-145 159-261 (359)
34 1ys4_A Aspartate-semialdehyde 99.2 2.7E-12 9.1E-17 107.5 0.7 92 46-145 153-256 (354)
35 4dpk_A Malonyl-COA/succinyl-CO 99.2 1.1E-11 3.9E-16 104.6 3.7 92 46-145 149-254 (359)
36 4dpl_A Malonyl-COA/succinyl-CO 99.1 1.1E-11 3.9E-16 104.6 2.2 92 46-145 149-254 (359)
37 3dr3_A N-acetyl-gamma-glutamyl 98.9 9.2E-10 3.1E-14 92.3 3.6 88 46-145 153-248 (337)
38 2nqt_A N-acetyl-gamma-glutamyl 98.7 4.1E-09 1.4E-13 88.7 1.9 90 47-145 155-256 (352)
39 3hsk_A Aspartate-semialdehyde 98.5 2E-08 7E-13 85.4 1.3 93 46-145 168-278 (381)
40 3pwk_A Aspartate-semialdehyde 97.8 9.7E-06 3.3E-10 68.6 3.6 100 46-145 124-258 (366)
41 3uw3_A Aspartate-semialdehyde 97.8 1.2E-05 4E-10 68.4 3.8 97 46-144 134-287 (377)
42 3pzr_A Aspartate-semialdehyde 97.7 1.8E-05 6E-10 67.1 4.0 37 46-82 130-166 (370)
43 3tz6_A Aspartate-semialdehyde 97.4 8.1E-05 2.8E-09 62.4 3.0 36 46-81 125-160 (344)
44 1xyg_A Putative N-acetyl-gamma 96.5 0.00055 1.9E-08 57.3 0.6 31 2-33 17-51 (359)
45 1ys4_A Aspartate-semialdehyde 95.9 0.0012 4.2E-08 54.8 -0.0 29 2-31 9-41 (354)
46 2hjs_A USG-1 protein homolog; 95.2 0.0042 1.4E-07 51.5 0.6 30 2-32 7-42 (340)
47 3pym_A GAPDH 3, glyceraldehyde 95.1 0.0021 7.3E-08 53.8 -1.4 82 52-138 38-126 (332)
48 3h9e_O Glyceraldehyde-3-phosph 94.9 0.0025 8.5E-08 53.7 -1.5 84 51-139 42-132 (346)
49 1vkn_A N-acetyl-gamma-glutamyl 94.7 0.0083 2.9E-07 50.3 1.2 94 46-145 153-255 (351)
50 3doc_A Glyceraldehyde 3-phosph 93.9 0.0066 2.2E-07 50.9 -1.1 106 26-137 5-127 (335)
51 3lvf_P GAPDH 1, glyceraldehyde 93.8 0.0078 2.7E-07 50.5 -1.0 105 26-136 7-126 (338)
52 3qy9_A DHPR, dihydrodipicolina 93.5 0.017 6E-07 45.9 0.7 30 1-32 3-35 (243)
53 4dib_A GAPDH, glyceraldehyde 3 93.3 0.0077 2.6E-07 50.7 -1.8 105 26-136 7-126 (345)
54 3ijp_A DHPR, dihydrodipicolina 92.6 0.024 8.3E-07 46.3 0.3 31 1-32 21-55 (288)
55 4f3y_A DHPR, dihydrodipicolina 92.4 0.027 9.1E-07 45.5 0.3 31 1-32 7-41 (272)
56 1t4b_A Aspartate-semialdehyde 91.1 0.03 1E-06 46.9 -0.8 19 1-19 1-20 (367)
57 2yv3_A Aspartate-semialdehyde 89.9 0.042 1.4E-06 45.3 -0.9 18 2-19 1-19 (331)
58 1f06_A MESO-diaminopimelate D- 89.3 0.074 2.5E-06 43.1 0.1 31 1-32 3-36 (320)
59 3do5_A HOM, homoserine dehydro 88.5 0.11 3.7E-06 42.9 0.6 31 1-32 2-43 (327)
60 4had_A Probable oxidoreductase 88.1 0.12 4E-06 41.7 0.5 31 1-32 23-57 (350)
61 3bio_A Oxidoreductase, GFO/IDH 87.7 0.13 4.3E-06 41.5 0.5 31 1-32 9-42 (304)
62 2nqt_A N-acetyl-gamma-glutamyl 87.1 0.091 3.1E-06 43.8 -0.7 30 1-31 9-47 (352)
63 1p9l_A Dihydrodipicolinate red 84.0 0.29 9.9E-06 38.8 0.9 30 2-32 1-34 (245)
64 4ew6_A D-galactose-1-dehydroge 82.3 0.33 1.1E-05 39.2 0.6 31 1-32 25-59 (330)
65 2ho3_A Oxidoreductase, GFO/IDH 82.0 0.34 1.1E-05 38.6 0.5 31 1-32 1-34 (325)
66 3ezy_A Dehydrogenase; structur 81.5 0.37 1.3E-05 38.8 0.6 31 1-32 2-35 (344)
67 4hkt_A Inositol 2-dehydrogenas 81.4 0.37 1.3E-05 38.5 0.5 31 1-32 3-36 (331)
68 3i23_A Oxidoreductase, GFO/IDH 80.1 0.45 1.5E-05 38.5 0.7 31 1-32 2-36 (349)
69 1dih_A Dihydrodipicolinate red 80.1 0.16 5.6E-06 40.6 -1.9 29 2-31 6-38 (273)
70 1ydw_A AX110P-like protein; st 79.6 0.52 1.8E-05 38.2 0.9 31 1-32 6-39 (362)
71 3evn_A Oxidoreductase, GFO/IDH 79.0 0.47 1.6E-05 37.9 0.5 31 1-32 5-38 (329)
72 3euw_A MYO-inositol dehydrogen 79.0 0.49 1.7E-05 38.0 0.5 31 1-32 4-37 (344)
73 2dc1_A L-aspartate dehydrogena 78.3 0.45 1.5E-05 36.4 0.1 30 2-32 1-32 (236)
74 3e9m_A Oxidoreductase, GFO/IDH 77.9 0.59 2E-05 37.5 0.7 31 1-32 5-38 (330)
75 3e18_A Oxidoreductase; dehydro 76.2 0.66 2.3E-05 37.7 0.6 30 2-32 6-38 (359)
76 3q2i_A Dehydrogenase; rossmann 76.0 0.76 2.6E-05 37.0 0.9 31 1-32 13-47 (354)
77 3upl_A Oxidoreductase; rossman 75.9 0.66 2.3E-05 40.0 0.5 31 1-32 23-56 (446)
78 3ing_A Homoserine dehydrogenas 75.5 0.41 1.4E-05 39.4 -0.9 30 2-32 5-43 (325)
79 3kux_A Putative oxidoreductase 75.4 0.72 2.4E-05 37.2 0.6 31 1-32 7-41 (352)
80 3gdo_A Uncharacterized oxidore 75.3 0.74 2.5E-05 37.4 0.6 31 1-32 5-39 (358)
81 3e82_A Putative oxidoreductase 74.8 0.75 2.6E-05 37.5 0.6 31 1-32 7-41 (364)
82 3f4l_A Putative oxidoreductase 74.6 0.79 2.7E-05 36.9 0.6 31 1-32 2-37 (345)
83 3db2_A Putative NADPH-dependen 74.4 0.76 2.6E-05 37.0 0.5 30 2-32 6-38 (354)
84 3fhl_A Putative oxidoreductase 74.4 0.71 2.4E-05 37.5 0.3 31 1-32 5-39 (362)
85 3uuw_A Putative oxidoreductase 74.3 0.86 2.9E-05 35.9 0.8 31 1-32 6-40 (308)
86 1tlt_A Putative oxidoreductase 74.1 0.86 2.9E-05 36.1 0.7 31 1-32 5-39 (319)
87 3c1a_A Putative oxidoreductase 74.1 0.87 3E-05 36.1 0.7 31 1-32 10-43 (315)
88 4fb5_A Probable oxidoreductase 74.0 0.85 2.9E-05 36.5 0.7 30 2-32 26-65 (393)
89 3ip3_A Oxidoreductase, putativ 73.9 1.1 3.7E-05 35.9 1.3 31 1-32 2-33 (337)
90 3ohs_X Trans-1,2-dihydrobenzen 73.2 0.86 3E-05 36.4 0.5 31 1-32 2-37 (334)
91 3v1y_O PP38, glyceraldehyde-3- 72.1 0.35 1.2E-05 40.5 -2.1 108 26-139 6-131 (337)
92 2ixa_A Alpha-N-acetylgalactosa 71.8 0.97 3.3E-05 37.9 0.5 31 1-32 20-53 (444)
93 3rc1_A Sugar 3-ketoreductase; 71.4 0.89 3E-05 36.8 0.2 31 1-32 27-61 (350)
94 1h6d_A Precursor form of gluco 70.5 1.1 3.7E-05 37.6 0.6 31 1-32 83-117 (433)
95 1ebf_A Homoserine dehydrogenas 70.2 0.73 2.5E-05 38.3 -0.6 31 1-32 4-40 (358)
96 3mz0_A Inositol 2-dehydrogenas 70.1 1.1 3.8E-05 35.9 0.5 31 1-32 2-36 (344)
97 3cea_A MYO-inositol 2-dehydrog 68.9 1.4 4.7E-05 35.1 0.8 31 1-32 8-42 (346)
98 3o9z_A Lipopolysaccaride biosy 68.4 1.4 4.7E-05 35.3 0.7 31 1-32 3-36 (312)
99 3m2t_A Probable dehydrogenase; 67.7 1.4 4.8E-05 35.8 0.6 30 2-32 6-39 (359)
100 3c8m_A Homoserine dehydrogenas 67.1 0.62 2.1E-05 38.1 -1.6 30 2-32 7-46 (331)
101 3oa2_A WBPB; oxidoreductase, s 66.6 1.6 5.4E-05 35.0 0.7 31 1-32 3-36 (318)
102 3ec7_A Putative dehydrogenase; 66.3 1.5 5.1E-05 35.6 0.5 31 1-32 23-57 (357)
103 3moi_A Probable dehydrogenase; 66.1 1.6 5.5E-05 35.7 0.7 31 1-32 2-36 (387)
104 1gtm_A Glutamate dehydrogenase 66.1 1.3 4.3E-05 37.8 0.1 29 3-32 214-245 (419)
105 2ejw_A HDH, homoserine dehydro 65.9 0.93 3.2E-05 37.3 -0.8 30 2-32 4-44 (332)
106 1zh8_A Oxidoreductase; TM0312, 65.9 1.6 5.4E-05 35.1 0.6 31 1-32 18-53 (340)
107 3ids_C GAPDH, glyceraldehyde-3 65.2 1 3.4E-05 38.0 -0.7 56 77-136 83-138 (359)
108 4gqa_A NAD binding oxidoreduct 63.2 1.5 5E-05 36.1 -0.1 30 2-32 27-67 (412)
109 2b4r_O Glyceraldehyde-3-phosph 63.1 0.61 2.1E-05 39.0 -2.4 46 89-137 90-135 (345)
110 1lc0_A Biliverdin reductase A; 63.1 1.9 6.4E-05 34.1 0.5 31 1-32 7-43 (294)
111 1nvm_B Acetaldehyde dehydrogen 62.9 1.9 6.4E-05 35.0 0.5 30 2-32 5-38 (312)
112 1obf_O Glyceraldehyde 3-phosph 60.6 0.66 2.3E-05 38.6 -2.6 45 89-136 82-126 (335)
113 3btv_A Galactose/lactose metab 60.0 2.9 9.8E-05 35.0 1.1 30 2-32 21-58 (438)
114 3kb6_A D-lactate dehydrogenase 55.4 2.4 8.1E-05 34.7 -0.1 25 3-27 143-169 (334)
115 2glx_A 1,5-anhydro-D-fructose 52.6 3.1 0.00011 32.8 0.2 30 2-32 1-33 (332)
116 2p2s_A Putative oxidoreductase 51.3 4.1 0.00014 32.4 0.7 31 1-32 4-37 (336)
117 3hja_A GAPDH, glyceraldehyde-3 50.3 4.3 0.00015 34.1 0.7 105 26-137 24-148 (356)
118 2nvw_A Galactose/lactose metab 50.2 4.2 0.00014 34.6 0.6 31 1-32 39-77 (479)
119 1xdw_A NAD+-dependent (R)-2-hy 48.9 3.5 0.00012 33.5 -0.1 27 3-30 148-176 (331)
120 3dty_A Oxidoreductase, GFO/IDH 48.3 5.1 0.00017 32.8 0.8 31 2-32 13-49 (398)
121 4g2n_A D-isomer specific 2-hyd 48.1 4.3 0.00015 33.5 0.3 27 3-30 175-203 (345)
122 3u3x_A Oxidoreductase; structu 47.9 5.1 0.00017 32.5 0.7 30 2-32 27-59 (361)
123 4e5n_A Thermostable phosphite 47.8 4.4 0.00015 33.0 0.3 27 3-30 147-175 (330)
124 1r0k_A 1-deoxy-D-xylulose 5-ph 47.8 3.4 0.00012 34.9 -0.3 28 1-29 4-36 (388)
125 2g76_A 3-PGDH, D-3-phosphoglyc 47.2 4.6 0.00016 33.1 0.3 27 3-30 167-195 (335)
126 4h3v_A Oxidoreductase domain p 47.1 1.5 5.3E-05 34.9 -2.5 30 2-32 7-46 (390)
127 1dxy_A D-2-hydroxyisocaproate 47.0 3.9 0.00013 33.3 -0.1 27 3-30 147-175 (333)
128 3pp8_A Glyoxylate/hydroxypyruv 46.5 4.4 0.00015 32.9 0.1 27 3-30 141-169 (315)
129 4hy3_A Phosphoglycerate oxidor 44.8 5.2 0.00018 33.3 0.3 26 3-30 178-206 (365)
130 1gdh_A D-glycerate dehydrogena 44.7 5.2 0.00018 32.3 0.3 28 3-31 148-177 (320)
131 3evt_A Phosphoglycerate dehydr 43.8 4.5 0.00015 33.0 -0.2 26 3-30 139-167 (324)
132 2pi1_A D-lactate dehydrogenase 43.6 4.7 0.00016 32.9 -0.1 26 3-30 143-171 (334)
133 1mx3_A CTBP1, C-terminal bindi 43.3 5.7 0.00019 32.7 0.3 27 3-30 170-198 (347)
134 1qp8_A Formate dehydrogenase; 43.1 5.3 0.00018 32.1 0.1 26 3-30 126-154 (303)
135 3jtm_A Formate dehydrogenase, 42.9 5 0.00017 33.1 -0.1 26 3-30 166-194 (351)
136 3gg9_A D-3-phosphoglycerate de 42.7 4.9 0.00017 33.1 -0.1 26 3-30 162-190 (352)
137 3v5n_A Oxidoreductase; structu 42.7 7.5 0.00026 32.2 1.0 31 2-32 38-74 (417)
138 2yq5_A D-isomer specific 2-hyd 42.6 5 0.00017 33.1 -0.1 26 3-30 150-178 (343)
139 3hg7_A D-isomer specific 2-hyd 42.0 5.2 0.00018 32.7 -0.1 26 3-30 142-170 (324)
140 3mtj_A Homoserine dehydrogenas 41.7 4.5 0.00015 34.6 -0.5 30 2-32 11-52 (444)
141 1j4a_A D-LDH, D-lactate dehydr 41.3 5.4 0.00018 32.4 -0.1 27 3-30 148-176 (333)
142 4dgs_A Dehydrogenase; structur 40.9 6.5 0.00022 32.3 0.3 25 3-27 173-199 (340)
143 1j5p_A Aspartate dehydrogenase 40.6 6 0.00021 31.5 0.1 25 2-27 13-37 (253)
144 2cuk_A Glycerate dehydrogenase 39.2 6.1 0.00021 31.8 -0.1 26 3-30 146-174 (311)
145 1xea_A Oxidoreductase, GFO/IDH 39.0 6.5 0.00022 31.0 0.0 26 1-26 2-31 (323)
146 3d4o_A Dipicolinate synthase s 38.9 7 0.00024 30.7 0.2 26 3-30 157-185 (293)
147 1wwk_A Phosphoglycerate dehydr 38.7 6.2 0.00021 31.6 -0.1 26 3-30 144-172 (307)
148 3gvx_A Glycerate dehydrogenase 37.4 5.1 0.00018 32.2 -0.8 26 3-30 124-152 (290)
149 3llv_A Exopolyphosphatase-rela 37.4 6.8 0.00023 26.7 -0.1 28 1-29 6-35 (141)
150 3fwz_A Inner membrane protein 37.2 6.2 0.00021 27.3 -0.3 26 3-29 9-36 (140)
151 2ekl_A D-3-phosphoglycerate de 36.8 6.9 0.00024 31.4 -0.1 27 3-30 144-172 (313)
152 1sc6_A PGDH, D-3-phosphoglycer 35.8 7.4 0.00025 32.7 -0.1 24 3-27 147-173 (404)
153 2nac_A NAD-dependent formate d 35.2 7.8 0.00027 32.6 -0.1 26 3-30 193-221 (393)
154 2j6i_A Formate dehydrogenase; 35.2 7.2 0.00025 32.1 -0.3 26 3-30 166-195 (364)
155 3ba1_A HPPR, hydroxyphenylpyru 34.5 9 0.00031 31.2 0.2 25 3-27 166-192 (333)
156 3oet_A Erythronate-4-phosphate 33.5 8.5 0.00029 32.3 -0.1 24 3-27 121-147 (381)
157 2d0i_A Dehydrogenase; structur 33.0 8.8 0.0003 31.1 -0.1 27 3-30 148-176 (333)
158 2cvz_A Dehydrogenase, 3-hydrox 33.0 11 0.00038 28.7 0.5 26 1-27 1-28 (289)
159 2o4c_A Erythronate-4-phosphate 31.8 9.4 0.00032 31.9 -0.1 24 3-27 118-144 (380)
160 2rir_A Dipicolinate synthase, 29.9 12 0.00041 29.4 0.2 26 3-30 159-187 (300)
161 1dw9_A Cyanate lyase; cyanate 29.6 18 0.0006 26.9 1.1 29 60-91 110-138 (156)
162 2dbq_A Glyoxylate reductase; D 29.3 11 0.00038 30.4 -0.1 28 2-30 151-180 (334)
163 3ic5_A Putative saccharopine d 29.0 13 0.00045 23.8 0.2 27 1-27 5-34 (118)
164 2gcg_A Glyoxylate reductase/hy 28.8 10 0.00036 30.5 -0.3 27 3-30 157-185 (330)
165 3k5p_A D-3-phosphoglycerate de 28.0 12 0.00041 31.8 -0.1 24 3-27 158-184 (416)
166 1vm6_A DHPR, dihydrodipicolina 27.4 12 0.0004 29.5 -0.2 28 2-29 13-43 (228)
167 3h9u_A Adenosylhomocysteinase; 27.0 13 0.00044 31.9 -0.1 24 3-27 213-239 (436)
168 1yb4_A Tartronic semialdehyde 26.1 14 0.00048 28.3 -0.0 29 1-30 3-33 (295)
169 2nu8_A Succinyl-COA ligase [AD 25.8 12 0.00042 29.6 -0.4 29 2-30 8-39 (288)
170 1ygy_A PGDH, D-3-phosphoglycer 25.2 17 0.00058 31.3 0.3 25 3-27 144-170 (529)
171 2g82_O GAPDH, glyceraldehyde-3 25.1 11 0.00039 30.8 -0.7 46 89-137 77-122 (331)
172 3d64_A Adenosylhomocysteinase; 24.8 18 0.0006 31.5 0.3 24 3-27 279-305 (494)
173 2w2k_A D-mandelate dehydrogena 24.7 11 0.00036 30.8 -1.0 27 3-30 165-194 (348)
174 2g5c_A Prephenate dehydrogenas 24.5 17 0.00057 27.8 0.1 27 1-27 1-31 (281)
175 4gmf_A Yersiniabactin biosynth 24.2 24 0.00082 29.1 1.0 29 2-32 8-40 (372)
176 3dr3_A N-acetyl-gamma-glutamyl 23.9 19 0.00063 29.6 0.3 28 1-29 4-35 (337)
177 2h78_A Hibadh, 3-hydroxyisobut 23.9 20 0.00068 27.7 0.5 27 1-27 3-31 (302)
178 1vkn_A N-acetyl-gamma-glutamyl 23.6 20 0.00067 29.7 0.4 30 1-31 13-46 (351)
179 3n58_A Adenosylhomocysteinase; 23.5 16 0.00056 31.7 -0.1 24 3-27 249-275 (464)
180 2ahr_A Putative pyrroline carb 22.7 22 0.00076 26.7 0.5 19 1-19 3-21 (259)
181 3c85_A Putative glutathione-re 22.1 12 0.00042 26.6 -1.0 27 3-30 41-70 (183)
182 2ep7_A GAPDH, glyceraldehyde-3 21.6 13 0.00044 30.9 -1.1 47 89-138 80-126 (342)
183 1v9l_A Glutamate dehydrogenase 21.2 24 0.00083 30.0 0.5 30 2-32 211-242 (421)
184 4huj_A Uncharacterized protein 21.1 17 0.00057 27.1 -0.5 31 1-32 23-55 (220)
185 2yfq_A Padgh, NAD-GDH, NAD-spe 21.1 19 0.00065 30.6 -0.2 31 2-33 213-245 (421)
186 3l9w_A Glutathione-regulated p 20.8 18 0.00063 30.2 -0.3 26 3-29 6-33 (413)
187 3aog_A Glutamate dehydrogenase 20.8 21 0.00072 30.6 0.0 30 2-32 236-267 (440)
188 2hmt_A YUAA protein; RCK, KTN, 20.1 16 0.00055 24.2 -0.7 26 2-27 7-34 (144)
No 1
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=100.00 E-value=2.4e-55 Score=369.51 Aligned_cols=145 Identities=57% Similarity=0.862 Sum_probs=137.9
Q ss_pred CcceeEeccCceeeeeeec---CCCceEEEEecCC-cchhhhhhhcccc-------------------------------
Q psy6886 1 MSKIGINGFGRIGLNNLNS---QPCLRLVSMVSDV-LDVLYSELLLPRE------------------------------- 45 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~~~~~vva~Ind~-~d~~y~~~~~~~~------------------------------- 45 (146)
|+||||||||||||+|+|+ ++++|||| |||| +|++||+|||||+
T Consensus 1 ~~kv~INGfGrIGr~v~R~~~~~~~~~iva-iNd~~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~d 79 (332)
T 3pym_A 1 MVRVAINGFGRIGRLVMRIALSRPNVEVVA-LNDPFITNDYAAYMFKYDSTHGRYAGEVSHDDKHIIVDGKKIATYQERD 79 (332)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHSTTCEEEE-EECTTCCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred CeEEEEECCCcHHHHHHHHHHhCCCcEEEE-EeCCCCCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEEEEeecc
Confidence 8999999999999999998 78999999 9999 9999999995532
Q ss_pred ------------------------------------------------------------------CCCCccccchhHHH
Q psy6886 46 ------------------------------------------------------------------PSFVTVSNSLLTLA 59 (146)
Q Consensus 46 ------------------------------------------------------------------~s~~cttnclaPl~ 59 (146)
.++|||||||+|++
T Consensus 80 p~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~Lap~l 159 (332)
T 3pym_A 80 PANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSSTAPMFVMGVNEEKYTSDLKIVSNASCTTNCLAPLA 159 (332)
T ss_dssp GGGSCTTTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHHHHH
T ss_pred cccCCccccCccEEEEecccccCHHHHHHHHHcCCCEEEECCCCCCCCeEeeccchhhcCccccEEecCcchhhhhHHHH
Confidence 24569999999999
Q ss_pred HHhhhceeeeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeecCCee
Q psy6886 60 KVIHDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPVANVS 139 (146)
Q Consensus 60 kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~~~~s 139 (146)
|+|||+|||++|+|||+|++|++|+++|+|+++|||++|++++||||++||++|+++|++|+|+||++|++||||++++|
T Consensus 160 kvL~d~fGI~~g~mTTvha~T~~Q~~vDg~~~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~~s 239 (332)
T 3pym_A 160 KVINDAFGIEEGLMTTVHSLTATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVDVS 239 (332)
T ss_dssp HHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCTGGGSCGGGCCEEEECSHHHHHHHHSGGGTTSEEEEEEEESCSSCE
T ss_pred HHHHHhcCeEEEEEEEEeeccccchhccCCCcccCccccchhhcccCCCCChHHHHHHhhhhhcCCEEEEEEEcCCCCcE
Confidence 99999999999999999999999999999998999999999999999999999999999999999999999999999999
Q ss_pred EEEeEEC
Q psy6886 140 VVDLTVR 146 (146)
Q Consensus 140 ~~dlt~~ 146 (146)
++||+|+
T Consensus 240 ~~dlt~~ 246 (332)
T 3pym_A 240 VVDLTVK 246 (332)
T ss_dssp EEEEEEE
T ss_pred eeEEEEE
Confidence 9999984
No 2
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=100.00 E-value=2.1e-54 Score=364.49 Aligned_cols=145 Identities=50% Similarity=0.671 Sum_probs=136.9
Q ss_pred CcceeEeccCceeeeeeec---CCCceEEEEecCCcchhhhhhhcccc--------------------------------
Q psy6886 1 MSKIGINGFGRIGLNNLNS---QPCLRLVSMVSDVLDVLYSELLLPRE-------------------------------- 45 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~~~~~vva~Ind~~d~~y~~~~~~~~-------------------------------- 45 (146)
++||||||||||||+|+|+ ++++|||| |||++|++||+|||||+
T Consensus 4 ~~kv~INGfGrIGr~v~R~~~~~~~~~iva-ind~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~inGk~I~v~~e~dp 82 (338)
T 3lvf_P 4 AVKVAINGFGRIGRLAFRRIQEVEGLEVVA-VNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFSEPDA 82 (338)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSTTEEEEE-EECSSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSCG
T ss_pred cEEEEEECCCcHHHHHHHHHHHCCCceEEE-EecCCCHHHHHHHhccCCCCCCcCCeEEEcCCEEEECCEEEEEEEeccc
Confidence 3799999999999999998 67999999 99999999999995531
Q ss_pred ------------------------------------------------------------------CCCCccccchhHHH
Q psy6886 46 ------------------------------------------------------------------PSFVTVSNSLLTLA 59 (146)
Q Consensus 46 ------------------------------------------------------------------~s~~cttnclaPl~ 59 (146)
.+++||||||+|++
T Consensus 83 ~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~IISNasCTTn~Lap~l 162 (338)
T 3lvf_P 83 SKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVA 162 (338)
T ss_dssp GGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCEECCTTTTGGGCCSCCSEEECCCHHHHHHHHHH
T ss_pred ccCCccccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCCCCCCCEEeccCCHHHcCccCCeEecCchhhhhhHHHH
Confidence 24569999999999
Q ss_pred HHhhhceeeeeeeeeeeeccCccccccCCCCCC-CCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeecCCe
Q psy6886 60 KVIHDNFEIVEGLMTTVHATTATQKTVDGPSGK-LWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPVANV 138 (146)
Q Consensus 60 kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~-~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~~~~ 138 (146)
|+|||+|||++|+|||+|++|++|+++|+|+.+ |||++|++++||||++||++|+++|++|||+||++|++||||++++
T Consensus 163 kvL~d~fGI~~g~mTTvha~T~~q~~~D~~~~k~d~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~~ 242 (338)
T 3lvf_P 163 KVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATG 242 (338)
T ss_dssp HHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCCTTTTSCGGGCCEEEECSTTTTGGGTCGGGTTSEEEEEEEESCSSC
T ss_pred HHHHHhcCEEEEEEeeeccccchhhhhcCCccccccccchhhhceEEeCCCchHHHHhhhchhhcCcEEEEEEEcCCCce
Confidence 999999999999999999999999999999887 9999999999999999999999999999999999999999999999
Q ss_pred eEEEeEEC
Q psy6886 139 SVVDLTVR 146 (146)
Q Consensus 139 s~~dlt~~ 146 (146)
|++||+|+
T Consensus 243 s~~dlt~~ 250 (338)
T 3lvf_P 243 SLTELTVV 250 (338)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999984
No 3
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=100.00 E-value=1.3e-54 Score=366.46 Aligned_cols=144 Identities=44% Similarity=0.681 Sum_probs=123.7
Q ss_pred CcceeEeccCceeeeeeec---CCCceEEEEecCCcchhhhhhhcccc--------------------------------
Q psy6886 1 MSKIGINGFGRIGLNNLNS---QPCLRLVSMVSDVLDVLYSELLLPRE-------------------------------- 45 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~~~~~vva~Ind~~d~~y~~~~~~~~-------------------------------- 45 (146)
|+||||||||||||+|+|+ ++++|||| ||||+|++||+|||||+
T Consensus 4 ~~kv~INGfGrIGr~v~Ra~~~~~~~~iva-INd~~d~~~~a~llkyDS~hG~f~~~v~~~~~~l~inGk~I~v~~e~dp 82 (345)
T 4dib_A 4 MTRVAINGFGRIGRMVFRQAIKESAFEIVA-INASYPSETLAHLIKYDTVHGKFDGTVEAFEDHLLVDGKMIRLLNNRDP 82 (345)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTCSSSEEEE-EECSSCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEEEECCSCG
T ss_pred cEEEEEECCCcHHHHHHHHHHhCCCceEEE-EcCCCCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEEEeecCCh
Confidence 7899999999999999998 67899999 99999999999993321
Q ss_pred -------------------------------------------------------------------CCCCccccchhHH
Q psy6886 46 -------------------------------------------------------------------PSFVTVSNSLLTL 58 (146)
Q Consensus 46 -------------------------------------------------------------------~s~~cttnclaPl 58 (146)
.+++||||||+|+
T Consensus 83 ~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~IISNaSCTTn~Lap~ 162 (345)
T 4dib_A 83 KELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPGKNEDVTIVVGVNEDQLDITKHTVISNASCTTNCLAPV 162 (345)
T ss_dssp GGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCSEEECCCHHHHHHHHH
T ss_pred hhCCccccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHcCcccCeEEECCchhhhhhHHH
Confidence 2467999999999
Q ss_pred HHHhhhceeeeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeecCCe
Q psy6886 59 AKVIHDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPVANV 138 (146)
Q Consensus 59 ~kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~~~~ 138 (146)
+|+|||+|||++|+|||+|++|++|+++|+|+ +|||++|++++||||++||++|+++|++|+|+||++|++||||++++
T Consensus 163 lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~-kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkltg~avRVPv~~~ 241 (345)
T 4dib_A 163 VKVLDEQFGIENGLMTTVHAYTNDQKNIDNPH-KDLRRARACGQSIIPTTTGAAKALAKVLPHLNGKLHGMALRVPTPNV 241 (345)
T ss_dssp HHHHHHHHCEEEEEEEEEECC--------------CCTTSCTTTCCEEECCTHHHHHHHHCGGGTTTEEEEEEECCCSSE
T ss_pred HHHHHHhcCeEEEEEEeeeeccCCceeccccc-cccccchhhhhceecCCCchHHHHhhhccccCCcEEEEEEEccCccc
Confidence 99999999999999999999999999999998 79999999999999999999999999999999999999999999999
Q ss_pred eEEEeEEC
Q psy6886 139 SVVDLTVR 146 (146)
Q Consensus 139 s~~dlt~~ 146 (146)
|++||+|+
T Consensus 242 s~~dlt~~ 249 (345)
T 4dib_A 242 SLVDLVVD 249 (345)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999984
No 4
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=100.00 E-value=2e-54 Score=364.62 Aligned_cols=145 Identities=62% Similarity=0.888 Sum_probs=137.5
Q ss_pred CcceeEeccCceeeeeeec---CCCceEEEEecCC-cchhhhhhhcccc-------------------------------
Q psy6886 1 MSKIGINGFGRIGLNNLNS---QPCLRLVSMVSDV-LDVLYSELLLPRE------------------------------- 45 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~~~~~vva~Ind~-~d~~y~~~~~~~~------------------------------- 45 (146)
|+||||||||||||+|+|+ ++++|||| |||| +|++||+|||||+
T Consensus 3 ~~kv~INGfGrIGr~v~R~~~~~~~~~iva-iNd~~~d~~~~a~l~kyDS~hG~f~~~~v~~~~~~~l~i~Gk~I~v~~e 81 (337)
T 3v1y_O 3 KIKIGINGFGRIGRLVARVALQSEDVELVA-VNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGI 81 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSEEEEE-EECTTSCHHHHHHHHHCCTTTCCCCSSCEEEEETTEEEETTEEEEEECC
T ss_pred ceEEEEECCChHHHHHHHHHHhCCCcEEEE-EeCCCCCHHHHHHHhhhccCCCcccCceEEEcCCcEEEECCEEEEEEEe
Confidence 4799999999999999998 67899999 9999 9999999998853
Q ss_pred --------------------------------------------------------------------CCCCccccchhH
Q psy6886 46 --------------------------------------------------------------------PSFVTVSNSLLT 57 (146)
Q Consensus 46 --------------------------------------------------------------------~s~~cttnclaP 57 (146)
.+++||||||+|
T Consensus 82 ~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~Lap 161 (337)
T 3v1y_O 82 RNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAP 161 (337)
T ss_dssp SSGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHHH
T ss_pred cCcccCCccccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeECCCCCHHHcCCCCcEEecCchhhhhHHH
Confidence 124599999999
Q ss_pred HHHHhhhceeeeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeecCC
Q psy6886 58 LAKVIHDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPVAN 137 (146)
Q Consensus 58 l~kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~~~ 137 (146)
++|+|||+|||++|+|||+|++|++|+++|+|+.+|||++|++++||||++||++|+++|++|+|+||++|++||||+++
T Consensus 162 ~lkvL~d~fGI~~g~mTTvha~T~~q~~~Dg~~~kd~r~~r~~a~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~ 241 (337)
T 3v1y_O 162 LAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVD 241 (337)
T ss_dssp HHHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCTTCGGGGSBGGGCCEEEECCHHHHHHHHSGGGTTSEEEEEEECSCSS
T ss_pred HHHHHHHhcCeEEEEEeeeeeccchhhhccCCccccccccccccceeecCCCChHHHHHHhccccCCcEEEEEEEcCCCC
Confidence 99999999999999999999999999999999989999999999999999999999999999999999999999999999
Q ss_pred eeEEEeEEC
Q psy6886 138 VSVVDLTVR 146 (146)
Q Consensus 138 ~s~~dlt~~ 146 (146)
+|++||+|+
T Consensus 242 ~s~~dlt~~ 250 (337)
T 3v1y_O 242 VSVVDLTVR 250 (337)
T ss_dssp CEEEEEEEE
T ss_pred cEEEEEEEE
Confidence 999999984
No 5
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=100.00 E-value=2.6e-54 Score=366.18 Aligned_cols=145 Identities=51% Similarity=0.753 Sum_probs=136.6
Q ss_pred CcceeEeccCceeeeeeec-------CCCceEEEEecCC-cchhhhhhhcccc---------------------------
Q psy6886 1 MSKIGINGFGRIGLNNLNS-------QPCLRLVSMVSDV-LDVLYSELLLPRE--------------------------- 45 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~-------~~~~~vva~Ind~-~d~~y~~~~~~~~--------------------------- 45 (146)
++||||||||||||+|+|+ ++++|||| |||| +|++||+|||||+
T Consensus 2 ~~kv~INGFGrIGr~v~Ra~~~~~~~~~~~~vva-INd~~~d~~~~a~llkyDS~hG~f~~~v~~~~~~~~~~~~~~l~i 80 (359)
T 3ids_C 2 PIKVGINGFGRIGRMVFQALCEDGLLGTEIDVVA-VVDMNTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDDTLVV 80 (359)
T ss_dssp CEEEEEECTTHHHHHHHHHHHHTTCBTTTEEEEE-EECSSCCHHHHHHHHHEETTTEECSSCEEEECSCTTSSSCCEEEE
T ss_pred ceEEEEECCChHHHHHHHHhHHHHhcCCCcEEEE-EecCCCCHHHHHHHhcccCCCCCEeeEEEecccccccCCCCEEEE
Confidence 3799999999999999997 57899999 9997 9999999998752
Q ss_pred --------------------------------------------------------------------------------
Q psy6886 46 -------------------------------------------------------------------------------- 45 (146)
Q Consensus 46 -------------------------------------------------------------------------------- 45 (146)
T Consensus 81 nGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~I 160 (359)
T 3ids_C 81 NGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASGGAKTLVMGVNHHEYNPSEHHV 160 (359)
T ss_dssp TTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCCBSSCEECCTTTTGGGCCTTTCSE
T ss_pred CCEEEEEEEccCCcccCCccccCccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCCeEEeccCHHHcCCCCCCE
Confidence
Q ss_pred -CCCCccccchhHHHHHh-hhceeeeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeecccCccceeeeeecCCC
Q psy6886 46 -PSFVTVSNSLLTLAKVI-HDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALN 123 (146)
Q Consensus 46 -~s~~cttnclaPl~kvi-~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~ 123 (146)
.++|||||||+|++|+| ||+|||++|+|||+|++|++|+++|+|+++|||++|++++||||++||++|+++|++|||+
T Consensus 161 ISNaSCTTn~Lap~lkvL~~d~fGI~~g~mTTvha~T~tQ~~vD~~~~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~ 240 (359)
T 3ids_C 161 VSNASCTTNCLAPIVHVLVKEGFGVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTQ 240 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHTTCCCSEEEEEEEEECCTTSBSSSCCCTTCTGGGSBGGGCCEEEECSHHHHHHHHSGGGT
T ss_pred EECCchHhhhHHHhhhhhhhccCCeEEEEEeeeeeccchhhhhcCCccccccccccCcceeEccCCchHHHHhhhchhhc
Confidence 02459999999999999 9999999999999999999999999999889999999999999999999999999999999
Q ss_pred CCcceEEEeeecCCeeEEEeEEC
Q psy6886 124 GKLTGMAFRVPVANVSVVDLTVR 146 (146)
Q Consensus 124 Gk~~g~a~~VP~~~~s~~dlt~~ 146 (146)
||++|++||||++++|++||+|+
T Consensus 241 gkltg~avRVPv~~vs~~dlt~~ 263 (359)
T 3ids_C 241 GKLTGMSFRVPTPDVSVVDLTFT 263 (359)
T ss_dssp TSEEEEEEEESCSSCEEEEEEEE
T ss_pred CceEEEEEEcCCCCcEEEEEEEE
Confidence 99999999999999999999984
No 6
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=100.00 E-value=1.1e-53 Score=359.82 Aligned_cols=144 Identities=44% Similarity=0.624 Sum_probs=135.4
Q ss_pred CcceeEeccCceeeeeeec---C--CCceEEEEecCCcchhhhhhhcccc------------------------------
Q psy6886 1 MSKIGINGFGRIGLNNLNS---Q--PCLRLVSMVSDVLDVLYSELLLPRE------------------------------ 45 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~--~~~~vva~Ind~~d~~y~~~~~~~~------------------------------ 45 (146)
++||||||||||||+|+|+ + +++|||| |||++|++||+|||||+
T Consensus 2 ~~kv~INGfGrIGr~v~Ra~~~~~~~~~~iva-iNd~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~ 80 (335)
T 3doc_A 2 AVRVAINGFGRIGRNILRAIVESGRTDIQVVA-INDLGPVETNAHLLRYDSVHGRFPKEVEVAGDTIDVGYGPIKVHAVR 80 (335)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCSEEEEE-EECSSCHHHHHHHHHEETTTEECSSCCEECSSEEESSSSEEEEECCS
T ss_pred CEEEEEECCCcHHHHHHHHHHhccCCCeEEEE-EeCCCCHHHHHHHhcccCCCCCCCCeEEEecCEEEECCEEEEEEeec
Confidence 4799999999999999998 4 6899999 99999999999994431
Q ss_pred --------------------------------------------------------------------CCCCccccchhH
Q psy6886 46 --------------------------------------------------------------------PSFVTVSNSLLT 57 (146)
Q Consensus 46 --------------------------------------------------------------------~s~~cttnclaP 57 (146)
.++|||||||+|
T Consensus 81 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~~p~vV~gVN~~~~~~~~~IISNasCTTn~Lap 160 (335)
T 3doc_A 81 NPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPADGADLTVVYGVNNDKLTKDHLVISNASCTTNCLAP 160 (335)
T ss_dssp STTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCTTCSEECCTTTTGGGCCTTCCEEECCCHHHHHHHH
T ss_pred ccccccccccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCCCCCCCEEecccCHHHhCccCCeEecCchhhhhhHH
Confidence 245699999999
Q ss_pred HHHHhhhceeeeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeecCC
Q psy6886 58 LAKVIHDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPVAN 137 (146)
Q Consensus 58 l~kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~~~ 137 (146)
++|+|||+|||++|+|||+|++|++|+++|+|+ +|||++|++++||||++||++|+++|++|+|+||++|++||||+++
T Consensus 161 ~lk~L~d~fGI~~g~mTTvha~T~~q~~~D~p~-kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~ 239 (335)
T 3doc_A 161 VAQVLNDTIGIEKGFMTTIHSYTGDQPTLDTMH-KDLYRARAAALSMIPTSTGAAKAVGLVLPELKGKLDGVAIRVPTPN 239 (335)
T ss_dssp HHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCC-SSTTTTSCTTSSCEEEECCHHHHHHHHSGGGTTCEEEEEEEESCSS
T ss_pred hHHHHHHHcCEEEEEEEeeeeccchhhhhcCcc-ccccccccCcceEecCCCchHHHHHHhccccCCCEEEEEEEecccc
Confidence 999999999999999999999999999999996 7999999999999999999999999999999999999999999999
Q ss_pred eeEEEeEEC
Q psy6886 138 VSVVDLTVR 146 (146)
Q Consensus 138 ~s~~dlt~~ 146 (146)
+|++||+|+
T Consensus 240 ~s~~dlt~~ 248 (335)
T 3doc_A 240 VSVVDLTFI 248 (335)
T ss_dssp CEEEEEEEE
T ss_pred ccceEEEEE
Confidence 999999984
No 7
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=100.00 E-value=2e-53 Score=359.57 Aligned_cols=144 Identities=63% Similarity=0.909 Sum_probs=136.0
Q ss_pred CcceeEeccCceeeeeeec---CCCceEEEEecCC-cchhhhhhhcccc-------------------------------
Q psy6886 1 MSKIGINGFGRIGLNNLNS---QPCLRLVSMVSDV-LDVLYSELLLPRE------------------------------- 45 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~~~~~vva~Ind~-~d~~y~~~~~~~~------------------------------- 45 (146)
|+||||||||||||+|+|+ ++ ++||| |||| +|++||+|||||+
T Consensus 7 ~~kvgInGFGRIGrlv~R~~~~~~-veiva-inDp~~d~~~~a~l~~yDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~d 84 (346)
T 3h9e_O 7 ELTVGINGFGRIGRLVLRACMEKG-VKVVA-VNDPFIDPEYMVYMFKYDSTHGRYKGSVEFRNGQLVVDNHEISVYQCKE 84 (346)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEE-EECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS
T ss_pred eeEEEEECCChHHHHHHHHHHhCC-CEEEE-EeCCCCChhHhcccccccCCCCCCCCcEEEcCCEEEECCEEEEEEecCC
Confidence 6899999999999999998 55 99999 9999 9999999994431
Q ss_pred -------------------------------------------------------------------CCCCccccchhHH
Q psy6886 46 -------------------------------------------------------------------PSFVTVSNSLLTL 58 (146)
Q Consensus 46 -------------------------------------------------------------------~s~~cttnclaPl 58 (146)
.+++||||||+|+
T Consensus 85 p~~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps~d~plvV~gVN~~~~~~~~~~IISNasCTTn~Lap~ 164 (346)
T 3h9e_O 85 PKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSPDAPMFVMGVNENDYNPGSMNIVSNASCTTNCLAPL 164 (346)
T ss_dssp GGGCCGGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTTCSEEECCCHHHHHHHHH
T ss_pred hhhCCcccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeeCcccCHHHcCcccCCEEECCcchhhhHHHH
Confidence 2467999999999
Q ss_pred HHHhhhceeeeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeecCCe
Q psy6886 59 AKVIHDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPVANV 138 (146)
Q Consensus 59 ~kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~~~~ 138 (146)
+|+|||+|||++|+|||+|++|++|+++|+|+++|||++|++++||||++||++++++||+|+|+||++|++||||++++
T Consensus 165 lkvL~d~fGI~~g~mTTvhA~T~tQ~~~Dg~~~kd~r~~r~aa~NiIP~~tGaakavgkViPeL~gkltg~avRVPv~~~ 244 (346)
T 3h9e_O 165 AKVIHERFGIVEGLMTTVHSYTATQKTVDGPSRKAWRDGRGAHQNIIPASTGAAKAVTKVIPELKGKLTGMAFRVPTPDV 244 (346)
T ss_dssp HHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTSGGGGSBTTTCCEEECCHHHHHHHHHSGGGTTTEEEEEEEESCSSC
T ss_pred HHHHHHHhCeeEEEEeeeeeccCccccccCCCCCCccccccceeeeecccCchHHhhheechhhcCcEEEEEEEcccccc
Confidence 99999999999999999999999999999999899999999999999999999999999999999999999999999999
Q ss_pred eEEEeEEC
Q psy6886 139 SVVDLTVR 146 (146)
Q Consensus 139 s~~dlt~~ 146 (146)
|++||+|+
T Consensus 245 s~~dlt~~ 252 (346)
T 3h9e_O 245 SVVDLTCR 252 (346)
T ss_dssp EEEEEEEE
T ss_pred eeEEEEEE
Confidence 99999984
No 8
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=100.00 E-value=1.8e-51 Score=348.47 Aligned_cols=143 Identities=48% Similarity=0.687 Sum_probs=134.7
Q ss_pred cceeEeccCceeeeeeec--CCCceEEEEecCCcchhhhhhhccccC---------------------------------
Q psy6886 2 SKIGINGFGRIGLNNLNS--QPCLRLVSMVSDVLDVLYSELLLPREP--------------------------------- 46 (146)
Q Consensus 2 ~kv~ingfgriGr~v~r~--~~~~~vva~Ind~~d~~y~~~~~~~~~--------------------------------- 46 (146)
+||||||||||||+++|+ ..+++||| |||+.|++||+|||||++
T Consensus 22 ~kVaInGfGrIGr~vlr~l~e~~~~iva-Indl~d~~~~a~llkydS~hG~f~~~v~~~~~~l~i~Gk~I~v~~~~dp~~ 100 (356)
T 3hja_A 22 MKLAINGFGRIGRNVFKIAFERGIDIVA-INDLTDPKTLAHLLKYDSTFGVYNKKVESRDGAIVVDGREIKIIAERDPKN 100 (356)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE-EECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred eEEEEECCCHHHHHHHHHHHHCCCCEEE-EeCCCCHHHhhhhhccccCCCCCCCCEEEcCCEEEECCEEEEEEEcCChhh
Confidence 799999999999999998 33899999 999999999999986421
Q ss_pred ----------------------------------------------------------------------CCCccccchh
Q psy6886 47 ----------------------------------------------------------------------SFVTVSNSLL 56 (146)
Q Consensus 47 ----------------------------------------------------------------------s~~cttncla 56 (146)
++|||||||+
T Consensus 101 i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps~d~vp~vV~gVN~~~~~~~~~IISNaSCTTn~La 180 (356)
T 3hja_A 101 LPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCTTNCLA 180 (356)
T ss_dssp CCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCCSSCCEECCTTTSGGGCCTTCCEEECCCHHHHHHH
T ss_pred CCccccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCCCCCCCEEeccCCHHHcCcCccEEECCccchhhhh
Confidence 2359999999
Q ss_pred HHHHHhhhceeeeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeecC
Q psy6886 57 TLAKVIHDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPVA 136 (146)
Q Consensus 57 Pl~kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~~ 136 (146)
|++|+|||+|||++|+|||+|++|++|+++|+|+ +|||++|++++||||++||++|+++||+|+|+||++|++||||++
T Consensus 181 p~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~-kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkltg~avRVPv~ 259 (356)
T 3hja_A 181 PLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPH-SDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGTSMRVPVP 259 (356)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBTTTSCEEEECCTTTTHHHHCGGGTTTEEEEEEEESCS
T ss_pred HhHHHHHHhcCeEEEEEEEEEecccccccccCcc-cccccccccccEEEcCCCchHHHHHHhccccCCcEEEEEEEcCCC
Confidence 9999999999999999999999999999999998 899999999999999999999999999999999999999999999
Q ss_pred CeeEEEeEEC
Q psy6886 137 NVSVVDLTVR 146 (146)
Q Consensus 137 ~~s~~dlt~~ 146 (146)
++|++||+|+
T Consensus 260 ~~s~~dlt~~ 269 (356)
T 3hja_A 260 TGSIVDLTVQ 269 (356)
T ss_dssp SCEEEEEEEE
T ss_pred ccEeEEEEEE
Confidence 9999999984
No 9
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=100.00 E-value=1.1e-50 Score=342.55 Aligned_cols=143 Identities=44% Similarity=0.659 Sum_probs=134.6
Q ss_pred cceeEeccCceeeeeeec---CCCceEEEEecCCcchhhhhhhccccC--------------------------------
Q psy6886 2 SKIGINGFGRIGLNNLNS---QPCLRLVSMVSDVLDVLYSELLLPREP-------------------------------- 46 (146)
Q Consensus 2 ~kv~ingfgriGr~v~r~---~~~~~vva~Ind~~d~~y~~~~~~~~~-------------------------------- 46 (146)
+||||||||||||+++|+ ++++++|| |||++|++||+|||||++
T Consensus 3 ikV~InGfGrIGr~v~r~l~~~~~~evva-Ind~~~~~~~a~ll~yDs~hG~~~~~v~~~~~~l~v~Gk~i~v~~~~dp~ 81 (342)
T 2ep7_A 3 IKVGINGFGRIGRSFFRASWGREEIEIVA-INDLTDAKHLAHLLKYDSVHGIFKGSVEAKDDSIVVDGKEIKVFAQKDPS 81 (342)
T ss_dssp CEEEEECCSHHHHHHHHHHTTCTTCEEEE-EECSSCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEEEECCSSGG
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEE-EecCCChHHHhhhhhcccccccCCCcEEEcCCEEEECCEEEEEEEcCChh
Confidence 899999999999999998 67899999 999999999999865321
Q ss_pred -------------------------------------------------------------------CCCccccchhHHH
Q psy6886 47 -------------------------------------------------------------------SFVTVSNSLLTLA 59 (146)
Q Consensus 47 -------------------------------------------------------------------s~~cttnclaPl~ 59 (146)
++|||||||+|++
T Consensus 82 ~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGakkVvisaps~dvp~~vV~gVN~~~~~~~~~~IISNasCTTn~Lap~l 161 (342)
T 2ep7_A 82 QIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAKNPDITVVLGVNEEKYNPKEHNIISNASCTTNCLAPCV 161 (342)
T ss_dssp GCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHHHHH
T ss_pred hCCccccCCCEEEECCCchhhhhhhHHHHhcCCCEEEecCCCCCCCceEEcCcCHHHhcccCCeEEECCChHHHHHHHHH
Confidence 2379999999999
Q ss_pred HHhhhceeeeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeecCCee
Q psy6886 60 KVIHDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPVANVS 139 (146)
Q Consensus 60 kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~~~~s 139 (146)
|+|||+|||++|+|||+|++|++|+++|+| ++|||++|++++||||++||++|+++|++|+|+||++|++||||++++|
T Consensus 162 k~L~d~fGI~~~~mTTvha~T~~q~~~d~p-~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVPv~~~s 240 (342)
T 2ep7_A 162 KVLNEAFGVEKGYMVTVHAYTNDQRLLDLP-HKDFRRARAAAINIVPTTTGAAKAIGEVIPELKGKLDGTARRVPVPDGS 240 (342)
T ss_dssp HHHHHHHCEEEEEEEEEEECCTTSBSSSCC-CSSTTTTSBGGGCCEEECCCTTGGGGGTSGGGTTTEEEEEEEESCSSCE
T ss_pred HHHHHHcCeeEEEEEEEeecccchhhhcCC-cchhhhhhhHhhCccCCCCChHHHHHHhhhccCCCEEEEEEEecccceE
Confidence 999999999999999999999999999999 4899999999999999999999999999999999999999999999999
Q ss_pred EEEeEEC
Q psy6886 140 VVDLTVR 146 (146)
Q Consensus 140 ~~dlt~~ 146 (146)
++||+|+
T Consensus 241 ~~dltv~ 247 (342)
T 2ep7_A 241 LIDLTVV 247 (342)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999984
No 10
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=100.00 E-value=2.2e-49 Score=333.82 Aligned_cols=144 Identities=40% Similarity=0.582 Sum_probs=134.4
Q ss_pred CcceeEeccCceeeeeeec---C---CCceEEEEecCCcchhhhhhhcccc-----------------------------
Q psy6886 1 MSKIGINGFGRIGLNNLNS---Q---PCLRLVSMVSDVLDVLYSELLLPRE----------------------------- 45 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~---~~~~vva~Ind~~d~~y~~~~~~~~----------------------------- 45 (146)
|+||||||||||||+|+|+ + ++++||| |||++|++||+|||||+
T Consensus 1 ~ikVaInGfGrIGr~v~r~l~~~~~~~~~evva-Ind~~~~~~~a~ll~ydS~hg~f~~~v~~~~~~l~v~g~~i~v~~~ 79 (335)
T 1obf_O 1 TIRVAINGYGRIGRNILRAHYEGGKSHDIEIVA-INDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDAN 79 (335)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTSCSSEEEEE-EECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECC
T ss_pred CcEEEEECCCHHHHHHHHHHHhcCCCCCcEEEE-EeCCCCHHHHHHHhccCCcCCCCCCCEEEeCCEEEECCEEEEEEEc
Confidence 6899999999999999998 5 7999999 99999999999883210
Q ss_pred ----------------------------------------------------------------------CCCCccccch
Q psy6886 46 ----------------------------------------------------------------------PSFVTVSNSL 55 (146)
Q Consensus 46 ----------------------------------------------------------------------~s~~cttncl 55 (146)
.++|||||||
T Consensus 80 ~dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVviSaps~~dvp~~vV~gVN~~~~~~~~~IISNasCTTn~L 159 (335)
T 1obf_O 80 RNPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGGADVDATVVYGVNHGTLKSTDTVISNASCTTNCL 159 (335)
T ss_dssp SCGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHHHH
T ss_pred CCcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEECCcccCCCCceEEccCCHHHhCcCccEEeCCcHHHHHH
Confidence 1348999999
Q ss_pred hHHHHHhhhceeeeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeec
Q psy6886 56 LTLAKVIHDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPV 135 (146)
Q Consensus 56 aPl~kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~ 135 (146)
+|++|+|||+|||++|+|||+|++|++|+++|+|+ +|||++|++++||||++||++|+++|++|+|+||++|++||||+
T Consensus 160 ap~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~~~-~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVPv 238 (335)
T 1obf_O 160 APLVKPLNDKLGLQDGLMTTVHAYTNNQVLTDVYH-EDLRRARSATMSMIPTKTGAAAAVGDVLPELDGKLNGYAIRVPT 238 (335)
T ss_dssp HHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCC-SSTTTTSCTTTCCEEEECCHHHHHHHHCGGGTTSEEEEEEEESC
T ss_pred HHHHHHHHHhcCeeEEEEEEEchhhhhhhhhcccc-cccccccchhhccccCCCcchHhHhhhccccCCceEEEEEEeec
Confidence 99999999999999999999999999999999995 79999999999999999999999999999999999999999999
Q ss_pred CCeeEEEeEEC
Q psy6886 136 ANVSVVDLTVR 146 (146)
Q Consensus 136 ~~~s~~dlt~~ 146 (146)
+++|++||+|+
T Consensus 239 ~~~s~~dl~v~ 249 (335)
T 1obf_O 239 INVSIVDLSFV 249 (335)
T ss_dssp SSCEEEEEEEE
T ss_pred cceEEEEEEEE
Confidence 99999999984
No 11
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=100.00 E-value=4.5e-49 Score=332.99 Aligned_cols=144 Identities=59% Similarity=0.871 Sum_probs=134.7
Q ss_pred cceeEeccCceeeeeeec---CCCceEEEEecCC-cchhhhhhhcccc--------------------------------
Q psy6886 2 SKIGINGFGRIGLNNLNS---QPCLRLVSMVSDV-LDVLYSELLLPRE-------------------------------- 45 (146)
Q Consensus 2 ~kv~ingfgriGr~v~r~---~~~~~vva~Ind~-~d~~y~~~~~~~~-------------------------------- 45 (146)
+||||||||||||+|+|+ ++++|||+ |||| +|++|++|||||+
T Consensus 12 ~kv~INGfGrIGr~v~ra~~~~~~~evva-Ind~~~~~~~~a~l~~yDS~hg~~~~~v~~~~~~l~v~Gk~i~v~~~~dp 90 (345)
T 2b4r_O 12 TKLGINGFGRIGRLVFRAAFGRKDIEVVA-INDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDP 90 (345)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEE-EECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSSG
T ss_pred eEEEEeCCchHHHHHHHHHhhCCCcEEEE-EcCCCCChHHHHHHhccCCCCCcCCCCEEEcCCEEEECCEEEEEEEcCCc
Confidence 689999999999999999 78999999 9996 9999999983321
Q ss_pred ------------------------------------------------------------------CCCCccccchhHHH
Q psy6886 46 ------------------------------------------------------------------PSFVTVSNSLLTLA 59 (146)
Q Consensus 46 ------------------------------------------------------------------~s~~cttnclaPl~ 59 (146)
.++|||||||+|++
T Consensus 91 ~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVIsaps~~dvplvV~gVN~~~~~~~~~IISNasCTTn~Lap~l 170 (345)
T 2b4r_O 91 SQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLA 170 (345)
T ss_dssp GGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCCTTCCEEECCCHHHHHHHHHH
T ss_pred ccCcccccCCCEEEECcCccccHhhHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHhCCCCCEEECCchHHHHHHHHH
Confidence 13479999999999
Q ss_pred HHhhhceeeeeeeeeeeeccCccccccCCCC--CCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeecCC
Q psy6886 60 KVIHDNFEIVEGLMTTVHATTATQKTVDGPS--GKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPVAN 137 (146)
Q Consensus 60 kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~--~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~~~ 137 (146)
|+|||+|||++|+|||+|++|++|+++|+|+ ++|||++|++++||||++||++|+++|++|+|+||++|++||||+++
T Consensus 171 k~L~d~fGI~~~~mTTvhA~T~~q~~~d~~~~~~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVPv~~ 250 (345)
T 2b4r_O 171 KVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGT 250 (345)
T ss_dssp HHHHHHHCEEEEEEEEEECCCTTSCSSSCCCGGGCCGGGGSCTTTCCEEEECCHHHHHHHHSGGGTTTEEEEEEECSCSS
T ss_pred HHHHHhcCeeEEEEEEeehhhchhhhhcccccccCCCccccchhhccCcCCCchHHHHHHhhhhcCCcEEEEEEEecccc
Confidence 9999999999999999999999999999997 38999999999999999999999999999999999999999999999
Q ss_pred eeEEEeEEC
Q psy6886 138 VSVVDLTVR 146 (146)
Q Consensus 138 ~s~~dlt~~ 146 (146)
+|++||+++
T Consensus 251 gs~~dltv~ 259 (345)
T 2b4r_O 251 VSVVDLVCR 259 (345)
T ss_dssp CEEEEEEEE
T ss_pred eEEEEEEEE
Confidence 999999984
No 12
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=100.00 E-value=1.8e-44 Score=308.26 Aligned_cols=144 Identities=47% Similarity=0.692 Sum_probs=132.4
Q ss_pred CcceeEeccCceeeeeeec---C--CCceEEEEecCCcchhhhhhhcccc------------------------------
Q psy6886 1 MSKIGINGFGRIGLNNLNS---Q--PCLRLVSMVSDVLDVLYSELLLPRE------------------------------ 45 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~--~~~~vva~Ind~~d~~y~~~~~~~~------------------------------ 45 (146)
|+||||||||||||+++|+ + +++++|+ |||+.|++|++|||+|+
T Consensus 2 ~ikVgInGfGrIGr~vlR~l~~~~~~~veIVa-Ind~~d~~~~a~ll~yds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~ 80 (380)
T 2d2i_A 2 TIRVAINGFGRIGRNFLRCWFGRQNTDLEVVA-INNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDR 80 (380)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSCSEEEEE-EECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCS
T ss_pred CcEEEEECcCHHHHHHHHHHhcCCCCCEEEEE-EecCCCHHHHHHhhcccccCCCCCCcEEEeCCeEEECCeEEEEEecC
Confidence 3899999999999999998 5 8899999 99998888886653110
Q ss_pred ----------------------------------------------------------------------CCCCccccch
Q psy6886 46 ----------------------------------------------------------------------PSFVTVSNSL 55 (146)
Q Consensus 46 ----------------------------------------------------------------------~s~~cttncl 55 (146)
.+++||||||
T Consensus 81 dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~ps~d~~p~~~V~GVN~e~~~~~~~~IVSNasCtTn~l 160 (380)
T 2d2i_A 81 NPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKAEGVGTYVIGVNDSEYRHEDFAVISNASCTTNCL 160 (380)
T ss_dssp CGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHHHHH
T ss_pred ChHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEEEEcCCCCCCCCceEEcccCHHHhcccCCcEEECCchHHHHH
Confidence 1247999999
Q ss_pred hHHHHHhhhceeeeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeec
Q psy6886 56 LTLAKVIHDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPV 135 (146)
Q Consensus 56 aPl~kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~ 135 (146)
+|++|+||++|||++|+|||+|++|++|+++|+|+ ++||++|++++||||++||++++++|++|||+||++|+++|||+
T Consensus 161 ap~lk~L~d~fgI~~g~mTTvha~Tg~q~~vD~~~-~d~r~gR~aa~NiIP~~Tgaakav~kvlPeL~gkl~g~avRVPt 239 (380)
T 2d2i_A 161 APVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASH-RDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVPT 239 (380)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCC-SSTTTTSCGGGCCEEEECCHHHHHHHHCGGGTTTEEEEEEEESC
T ss_pred HHHHHHHHHhcCeeEEEEEEEeeccccchhhccch-hhhhhcchHhhCeEeccCchHHHHHhhhHhhhCcEEEEEEEecc
Confidence 99999999999999999999999999999999996 79999999999999999999999999999999999999999999
Q ss_pred CCeeEEEeEEC
Q psy6886 136 ANVSVVDLTVR 146 (146)
Q Consensus 136 ~~~s~~dlt~~ 146 (146)
+++|++||+++
T Consensus 240 ~~gs~~dlt~~ 250 (380)
T 2d2i_A 240 PNVSVVDLVVQ 250 (380)
T ss_dssp SSCEEEEEEEE
T ss_pred CCEEEEEEEEE
Confidence 99999999973
No 13
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=100.00 E-value=3.5e-44 Score=302.20 Aligned_cols=144 Identities=44% Similarity=0.645 Sum_probs=134.2
Q ss_pred CcceeEeccCceeeeeeec---C--CCceEEEEecCCcchhhhhhhcccc------------------------------
Q psy6886 1 MSKIGINGFGRIGLNNLNS---Q--PCLRLVSMVSDVLDVLYSELLLPRE------------------------------ 45 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~--~~~~vva~Ind~~d~~y~~~~~~~~------------------------------ 45 (146)
|+||||||||||||+++|+ + +++|+|+ |||++|++||+|||||+
T Consensus 1 ~ikVgInG~G~IGr~llR~l~~~~~p~~eiva-Ind~~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~~i~v~~~ 79 (337)
T 1rm4_O 1 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVV-INDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSD 79 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSCSEEEEE-EECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECC
T ss_pred CeEEEEECCCHHHHHHHHHHHhCCCCCeEEEE-EEcCCCHHHHHHHhcccccCCCccceeEEecCCeEEECCeEEEEEec
Confidence 7899999999999999998 5 8999999 99999999998875430
Q ss_pred ---------------------------------------------------------------------CCCCccccchh
Q psy6886 46 ---------------------------------------------------------------------PSFVTVSNSLL 56 (146)
Q Consensus 46 ---------------------------------------------------------------------~s~~cttncla 56 (146)
.+++||||||+
T Consensus 80 ~dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSap~r~d~p~~V~GVN~~~~~~~~~IIsNasCtTn~la 159 (337)
T 1rm4_O 80 RNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLA 159 (337)
T ss_dssp SCGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCCBCCTTTTGGGCCTTCSEEECCCHHHHHHH
T ss_pred CChhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEECCcccCCCCeEeecCCHHHhCCCCeEEECCChHHHHHH
Confidence 12479999999
Q ss_pred HHHHHhhhceeeeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeecC
Q psy6886 57 TLAKVIHDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPVA 136 (146)
Q Consensus 57 Pl~kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~~ 136 (146)
|++|.||++|||++|+|||+|++|++|++.|+|+ +|||++|++++||||++||++++++|++|||+||++++++|||++
T Consensus 160 p~lk~L~~~fgI~~~~mtTvha~Tgaq~l~d~~~-~~~r~~r~~a~NiiP~~tgaakav~kvlPel~gkl~~~a~RVP~~ 238 (337)
T 1rm4_O 160 PFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASH-RDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTP 238 (337)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCC-SSTTTTSCTTTCCEEECCCHHHHHHHHCGGGTTTEEEEEEEESCS
T ss_pred HHHHHHHHhcCeeEEEEEEEEecCCccchhhcch-hhhccchhhhcCcccccchhhHHHHhhhhhhcCcEEEEEEEecCC
Confidence 9999999999999999999999999999999985 799999999999999999999999999999999999999999999
Q ss_pred CeeEEEeEEC
Q psy6886 137 NVSVVDLTVR 146 (146)
Q Consensus 137 ~~s~~dlt~~ 146 (146)
++|++||+++
T Consensus 239 ~gs~~dl~~~ 248 (337)
T 1rm4_O 239 NVSVVDLVVQ 248 (337)
T ss_dssp SCEEEEEEEE
T ss_pred CEEEEEEEEE
Confidence 9999999973
No 14
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=100.00 E-value=6.3e-44 Score=299.99 Aligned_cols=142 Identities=42% Similarity=0.591 Sum_probs=132.6
Q ss_pred cceeEeccCceeeeeeec---CCCceEEEEecCCcchhhhhhhccc----------------------------------
Q psy6886 2 SKIGINGFGRIGLNNLNS---QPCLRLVSMVSDVLDVLYSELLLPR---------------------------------- 44 (146)
Q Consensus 2 ~kv~ingfgriGr~v~r~---~~~~~vva~Ind~~d~~y~~~~~~~---------------------------------- 44 (146)
+||||||||||||+++|+ + ++++|+ |||++|++||+|||+|
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~-~~evva-ind~~~~~~~a~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp~ 78 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSR-GVEVAL-INDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPK 78 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEE-EECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGG
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCEEEE-EecCCCHHHHhHhhhccccCCCCCceEEEcCCEEEECCEEEEEEecCChh
Confidence 599999999999999998 6 899999 9999999999998432
Q ss_pred -----------------------------------------------------------------cCCCCccccchhHHH
Q psy6886 45 -----------------------------------------------------------------EPSFVTVSNSLLTLA 59 (146)
Q Consensus 45 -----------------------------------------------------------------~~s~~cttnclaPl~ 59 (146)
-.+++||||||+|++
T Consensus 79 ~l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps~d~~p~vV~gVN~~~~~~~~~~IIsnasCtTn~lap~l 158 (331)
T 2g82_O 79 EIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKGEDITIVMGVNHEAYDPSRHHIISNASCTTNSLAPVM 158 (331)
T ss_dssp GSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCCEEECCCHHHHHHHHHH
T ss_pred hCcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCCcCCCCEEeeccCHHHhCcCCCCEEECCChHHHHHHHHH
Confidence 013679999999999
Q ss_pred HHhhhceeeeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeecCCee
Q psy6886 60 KVIHDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPVANVS 139 (146)
Q Consensus 60 kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~~~~s 139 (146)
|.||++|||++|+|||+|++|++|+++|+|+ +|||++|++++||||++||++++++|++|+|+||++++++|||++++|
T Consensus 159 k~L~~~fgI~~~~mtTvha~Tg~q~~~d~~~-~d~r~~r~~a~NiIP~~tGaakav~kIlp~L~gkl~g~a~RVPv~~gs 237 (331)
T 2g82_O 159 KVLEEAFGVEKALMTTVHSYTNDQRLLDLPH-KDLRRARAAAINIIPTTTGAAKATALVLPSLKGRFDGMALRVPTATGS 237 (331)
T ss_dssp HHHHHHTCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBGGGCCEEECCCHHHHHTTTCGGGTTSEEEEEEEESCSSCE
T ss_pred HHHHHhcCccEEEEEEEeecccccchhcccc-ccccccchhhhCccccCCCchhhhhhhHHhcCCCEEEEEEEeCCCCEE
Confidence 9999999999999999999999999999985 799999999999999999999999999999999999999999999999
Q ss_pred EEEeEEC
Q psy6886 140 VVDLTVR 146 (146)
Q Consensus 140 ~~dlt~~ 146 (146)
++||+++
T Consensus 238 ~~dl~v~ 244 (331)
T 2g82_O 238 ISDITAL 244 (331)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999973
No 15
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=100.00 E-value=4.4e-43 Score=295.46 Aligned_cols=144 Identities=47% Similarity=0.692 Sum_probs=131.9
Q ss_pred CcceeEeccCceeeeeeec---C--CCceEEEEecCCcchhhhhhhcccc------------------------------
Q psy6886 1 MSKIGINGFGRIGLNNLNS---Q--PCLRLVSMVSDVLDVLYSELLLPRE------------------------------ 45 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~--~~~~vva~Ind~~d~~y~~~~~~~~------------------------------ 45 (146)
|+||||||||||||.++|+ + +++++|+ |||+.|++|++|||+|+
T Consensus 2 ~ikVgI~G~G~IGr~v~r~l~~~~~~~~evva-Ind~~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~ 80 (339)
T 3b1j_A 2 TIRVAINGFGRIGRNFLRCWFGRQNTDLEVVA-INNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDR 80 (339)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSCCSEEEEE-EECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCS
T ss_pred ceEEEEECCCHHHHHHHHHHHhcCCCCeEEEE-EecCCCHHHHHHHhccccccCCCCCcEEEcCCeeeecCceEEEEecC
Confidence 3899999999999999998 5 8899999 99998888887652110
Q ss_pred ----------------------------------------------------------------------CCCCccccch
Q psy6886 46 ----------------------------------------------------------------------PSFVTVSNSL 55 (146)
Q Consensus 46 ----------------------------------------------------------------------~s~~cttncl 55 (146)
.+++||||||
T Consensus 81 dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~~~~~p~~~V~gVN~~~~~~~~~~IISnasCtTn~l 160 (339)
T 3b1j_A 81 NPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKGEGVGTYVIGVNDSEYRHEDFAVISNASCTTNCL 160 (339)
T ss_dssp CGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHHHHH
T ss_pred ChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEEEEeCCCCCCCCeeEEcccCHHHhCcCCCeEEECCcchhhHH
Confidence 1235999999
Q ss_pred hHHHHHhhhceeeeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeec
Q psy6886 56 LTLAKVIHDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPV 135 (146)
Q Consensus 56 aPl~kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~ 135 (146)
+|++|+||++|||++|+|||+|++|++|+++|+|+ ++||++|++++||||++||++++++|++|+|+||++|+++|||+
T Consensus 161 ap~lk~L~~~fgI~~~~~tTvha~Tg~q~~vd~~~-~d~r~~r~a~~NiiP~~tgaakav~kVlpeL~gkl~g~a~rVP~ 239 (339)
T 3b1j_A 161 APVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASH-RDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVPT 239 (339)
T ss_dssp HHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCC-SSTTTTSCTTSCCEEEECSHHHHHHHHCGGGTTTEEEEEEEESC
T ss_pred HHHHHHHHHhCCeeEEEEEEEEeecCCchhcccch-hhhhccccHHHceEcccCchHHHHHHHhHhhcCcEEEEEEEecc
Confidence 99999999999999999999999999999999996 69999999999999999999999999999999999999999999
Q ss_pred CCeeEEEeEEC
Q psy6886 136 ANVSVVDLTVR 146 (146)
Q Consensus 136 ~~~s~~dlt~~ 146 (146)
+++|++||++.
T Consensus 240 ~~g~~~dl~v~ 250 (339)
T 3b1j_A 240 PNVSVVDLVVQ 250 (339)
T ss_dssp SSCEEEEEEEE
T ss_pred CCEEEEEEEEE
Confidence 99999999973
No 16
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=100.00 E-value=2.7e-42 Score=292.37 Aligned_cols=145 Identities=60% Similarity=0.874 Sum_probs=131.2
Q ss_pred CcceeEeccCceeeeeeec---CCCceEEEEecCC-cchhhhhhhcccc-------------------------------
Q psy6886 1 MSKIGINGFGRIGLNNLNS---QPCLRLVSMVSDV-LDVLYSELLLPRE------------------------------- 45 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~~~~~vva~Ind~-~d~~y~~~~~~~~------------------------------- 45 (146)
|+||||||||||||+++|+ ++++|||+ |||| .|++|++|||+|+
T Consensus 17 ~ikVgI~G~G~iGr~llR~l~~~p~veiva-indp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~~d 95 (354)
T 3cps_A 17 QGTLGINGFGRIGRLVLRACMERNDITVVA-INDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAKD 95 (354)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCSSCEEEE-EECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECCSC
T ss_pred ceEEEEECCCHHHHHHHHHHHcCCCeEEEE-ecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEecCC
Confidence 6899999999999999998 78999999 9996 8998777652210
Q ss_pred --------------------------------------------------------------------CCCCccccchhH
Q psy6886 46 --------------------------------------------------------------------PSFVTVSNSLLT 57 (146)
Q Consensus 46 --------------------------------------------------------------------~s~~cttnclaP 57 (146)
.+++||||||+|
T Consensus 96 p~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~padd~~p~~V~GVN~~~~~~~~~~IISNpsCtTn~lap 175 (354)
T 3cps_A 96 PAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPPKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNCLAP 175 (354)
T ss_dssp GGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCSSCCCBCCTTTTGGGCCTTTCSEEECCCHHHHHHHH
T ss_pred hHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCCCCCCCCEEEeccCHHHhCcCCCcEEECCCcHHHHHHH
Confidence 124499999999
Q ss_pred HHHHhhhceeeeeeeeeeeeccCccccccCCCCC--CCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeec
Q psy6886 58 LAKVIHDNFEIVEGLMTTVHATTATQKTVDGPSG--KLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPV 135 (146)
Q Consensus 58 l~kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~--~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~ 135 (146)
++|.|+++|||++|+|||+|++|++|+.+|+|++ ++||++|++++||||++||++++++|++|+|+||++++++|||+
T Consensus 176 ~lkpL~~~~gI~~g~mtTvha~Tg~q~~vd~~~~~~k~~r~~r~aa~NiiP~~tG~akei~kvlp~l~gkl~~~a~rVP~ 255 (354)
T 3cps_A 176 LAKIINDKFGIVEGLMTTVHSLTANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAKAVGKVIPALNGKLTGMAIRVPT 255 (354)
T ss_dssp HHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCCCC--CCGGGSCTTSCCEEEECCHHHHHHHHSGGGTTTEEEEEEEESC
T ss_pred HHHHHHHhCCeeEEEEEEEecccccchhhhccchhccccccccchhccEEecCcCHHHHHHHHHHhcCCcEEEEEEEecc
Confidence 9999999999999999999999999999999963 69999999999999999999999999999999999999999999
Q ss_pred CCeeEEEeEEC
Q psy6886 136 ANVSVVDLTVR 146 (146)
Q Consensus 136 ~~~s~~dlt~~ 146 (146)
+++|++||+++
T Consensus 256 ~~gs~~dl~~~ 266 (354)
T 3cps_A 256 PDVSVVDLTCK 266 (354)
T ss_dssp SSCEEEEEEEE
T ss_pred CCEEEEEEEEE
Confidence 99999999973
No 17
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=100.00 E-value=6.5e-42 Score=287.95 Aligned_cols=144 Identities=63% Similarity=0.898 Sum_probs=133.0
Q ss_pred cceeEeccCceeeeeeec---CCCceEEEEecCC-cchhhhhhhcccc--------------------------------
Q psy6886 2 SKIGINGFGRIGLNNLNS---QPCLRLVSMVSDV-LDVLYSELLLPRE-------------------------------- 45 (146)
Q Consensus 2 ~kv~ingfgriGr~v~r~---~~~~~vva~Ind~-~d~~y~~~~~~~~-------------------------------- 45 (146)
+||||||||||||+++|+ ++++|+|+ |||+ .|++|++|+|||+
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevva-I~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 82 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVA-VNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGIR 82 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEE-EECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEECCS
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEE-EECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEecC
Confidence 699999999999999998 68999999 9997 8888777765210
Q ss_pred -------------------------------------------------------------------CCCCccccchhHH
Q psy6886 46 -------------------------------------------------------------------PSFVTVSNSLLTL 58 (146)
Q Consensus 46 -------------------------------------------------------------------~s~~cttnclaPl 58 (146)
.+++||||||+|+
T Consensus 83 dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa~d~p~~V~gvN~~~~~~~~~iIsnpsCtt~~la~~ 162 (337)
T 3e5r_O 83 NPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPL 162 (337)
T ss_dssp CGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHHHH
T ss_pred ChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCCCCCCEEEeccCHHHhCCCCcEEECCChHHHHHHHH
Confidence 1345999999999
Q ss_pred HHHhhhceeeeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeecCCe
Q psy6886 59 AKVIHDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPVANV 138 (146)
Q Consensus 59 ~kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~~~~ 138 (146)
+|.|+++|||++|+|||+|++|++|+.+|+|++++||++|++++||||++||++++++|++|+|+||++++++|||++++
T Consensus 163 lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~~g 242 (337)
T 3e5r_O 163 AKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVDV 242 (337)
T ss_dssp HHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCSGGGSBGGGSCEEEECCHHHHHHHHSGGGTTTEEEEEEEESCSSC
T ss_pred HHHHHHhcCccccceeEEEeeccccccccccccccccccccHhhCccccCCCchHHHHHHHHHhCCcEEEEEEEeccCCe
Confidence 99999999999999999999999999999998789999999999999999999999999999999999999999999999
Q ss_pred eEEEeEEC
Q psy6886 139 SVVDLTVR 146 (146)
Q Consensus 139 s~~dlt~~ 146 (146)
|++||++.
T Consensus 243 ~~~~l~~~ 250 (337)
T 3e5r_O 243 SVVDLTVR 250 (337)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999973
No 18
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=100.00 E-value=1.4e-41 Score=285.32 Aligned_cols=145 Identities=65% Similarity=0.957 Sum_probs=134.8
Q ss_pred CcceeEeccCceeeeeeec---CCCceEEEEecCCcchhhhhhhcccc--------------------------------
Q psy6886 1 MSKIGINGFGRIGLNNLNS---QPCLRLVSMVSDVLDVLYSELLLPRE-------------------------------- 45 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~~~~~vva~Ind~~d~~y~~~~~~~~-------------------------------- 45 (146)
|+||||||||||||+++|+ ++++|||+ |||..|++|++|||||+
T Consensus 1 ~ikVgI~G~G~iG~~l~R~l~~~~~veiv~-i~~~~~~~~~a~l~~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp 79 (330)
T 1gad_O 1 TIKVGINGFGRIGRIVFRAAQKRSDIEIVA-INDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDP 79 (330)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSEEEEE-EECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred CeEEEEECcCHHHHHHHHHHHcCCCeEEEE-EcCCCChhHHhHhhcccccCCCCCCeEEEcCCEEEECCEEEEEEEcCCh
Confidence 7899999999999999998 79999999 99998999877653320
Q ss_pred -----------------------------------------------------------------CCCCccccchhHHHH
Q psy6886 46 -----------------------------------------------------------------PSFVTVSNSLLTLAK 60 (146)
Q Consensus 46 -----------------------------------------------------------------~s~~cttnclaPl~k 60 (146)
.+++||||||+|++|
T Consensus 80 ~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~~~~~p~~V~GvN~~~~~~~~iIsNpsCtt~~lap~lk 159 (330)
T 1gad_O 80 ANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYAGQDIVSNASCTTNCLAPLAK 159 (330)
T ss_dssp GGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCCSCSEEECCCHHHHHHHHHHH
T ss_pred hhCccccccCCEEEECCCccccHHHHHHHHHCCCEEEEECCCCCCCCCeEeecCCHHHhCCCCEEEcCChHHHHHHHHHH
Confidence 124799999999999
Q ss_pred HhhhceeeeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeecCCeeE
Q psy6886 61 VIHDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPVANVSV 140 (146)
Q Consensus 61 vi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~~~~s~ 140 (146)
.|+++|||++++|||+|++|++|+.+|+|++++||++|++++||||++||++++++|++|+|+||++++++|||++++|+
T Consensus 160 pL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~~g~~ 239 (330)
T 1gad_O 160 VINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSV 239 (330)
T ss_dssp HHHHHHCEEEEEEEEEECCCTTSBSSSCCCSSCGGGGSBTTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEECSCSSCEE
T ss_pred HHHHhcCeeEEEEEEEEecccccccccccccCCCccccchhhCeEEcCCCcchhHHHHHHHhcCcEEEEEEEeccccEEE
Confidence 99999999999999999999999999999878999999999999999999999999999999999999999999999999
Q ss_pred EEeEEC
Q psy6886 141 VDLTVR 146 (146)
Q Consensus 141 ~dlt~~ 146 (146)
+|+++.
T Consensus 240 ~~l~~~ 245 (330)
T 1gad_O 240 VDLTVR 245 (330)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999973
No 19
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=100.00 E-value=1.8e-41 Score=285.12 Aligned_cols=144 Identities=49% Similarity=0.731 Sum_probs=133.2
Q ss_pred CcceeEeccCceeeeeeec---CCCceEEEEecCCcchhhhhhhcccc--------------------------------
Q psy6886 1 MSKIGINGFGRIGLNNLNS---QPCLRLVSMVSDVLDVLYSELLLPRE-------------------------------- 45 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~~~~~vva~Ind~~d~~y~~~~~~~~-------------------------------- 45 (146)
|+||||||||||||+++|+ +++++||+ |||..|++|++|||||+
T Consensus 1 mikVgI~G~G~iGr~l~R~l~~~~~veiva-in~~~~~~~~~~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp 79 (334)
T 3cmc_O 1 AVKVGINGFGRIGRNVFRAALKNPDIEVVA-VNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDP 79 (334)
T ss_dssp CEEEEEESCSHHHHHHHHHHTTCTTEEEEE-EECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred CeEEEEECCCHHHHHHHHHHhCCCCeEEEE-EeCCCCHHHHHHHhccCCcCCCcCceEEEccCcEEECCEEEEEEecCCh
Confidence 8999999999999999998 78999999 99988888887775110
Q ss_pred -------------------------------------------------------------------CCCCccccchhHH
Q psy6886 46 -------------------------------------------------------------------PSFVTVSNSLLTL 58 (146)
Q Consensus 46 -------------------------------------------------------------------~s~~cttnclaPl 58 (146)
.+++||||||+|+
T Consensus 80 ~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId~pa~d~~p~~V~eVN~~~i~~~~~~IIsNpsCttn~lap~ 159 (334)
T 3cmc_O 80 ENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAPF 159 (334)
T ss_dssp GGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHHHH
T ss_pred hhcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEEeCCCccCCCEeccccCHHHhCccCCeEEECCChHHHHHHHH
Confidence 1237999999999
Q ss_pred HHHhhhceeeeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeecCCe
Q psy6886 59 AKVIHDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPVANV 138 (146)
Q Consensus 59 ~kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~~~~ 138 (146)
+|.|+++|||++|+|||+|++|++|+++|+|+ ++||++|++++||||++||++++++|++|+|+||++++++|||++++
T Consensus 160 lkpL~~~~gI~~~~mtTvha~Sg~q~~~d~~~-~~~r~~r~~a~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~rVP~~~g 238 (334)
T 3cmc_O 160 AKVLHEQFGIVRGMMTTVHSYTNDQRILDLPH-KDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNV 238 (334)
T ss_dssp HHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBTTTCCEEEECSHHHHHHHHCGGGTTTEEEEEEEESCSSC
T ss_pred HHHHHHhcCceeeeEEEEEeccchhhhccccc-cccccchhhhhCEEeeccCcccchhhhChhhcCcEEEEEEEECCCCE
Confidence 99999999999999999999999999999985 79999999999999999999999999999999999999999999999
Q ss_pred eEEEeEEC
Q psy6886 139 SVVDLTVR 146 (146)
Q Consensus 139 s~~dlt~~ 146 (146)
|++||+++
T Consensus 239 s~~~l~~~ 246 (334)
T 3cmc_O 239 SVVDLVAE 246 (334)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999973
No 20
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=100.00 E-value=8.1e-41 Score=280.66 Aligned_cols=145 Identities=67% Similarity=0.961 Sum_probs=132.5
Q ss_pred CcceeEeccCceeeeeeec---CCCceEEEEecCC-cchhhhhhhccc--------------------------------
Q psy6886 1 MSKIGINGFGRIGLNNLNS---QPCLRLVSMVSDV-LDVLYSELLLPR-------------------------------- 44 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~~~~~vva~Ind~-~d~~y~~~~~~~-------------------------------- 44 (146)
|+||||||||||||.++|+ ++++++|+ |||+ .|+++++||+||
T Consensus 3 ~ikVgI~G~G~iGr~~~R~l~~~~~vevva-I~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d 81 (335)
T 1u8f_O 3 KVKVGVNGFGRIGRLVTRAAFNSGKVDIVA-INDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERD 81 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSEEEE-EECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS
T ss_pred ceEEEEEccCHHHHHHHHHHHcCCCcEEEE-ecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCC
Confidence 4799999999999999998 78999999 9996 888876654321
Q ss_pred -----------------------------------------------------------------cCCCCccccchhHHH
Q psy6886 45 -----------------------------------------------------------------EPSFVTVSNSLLTLA 59 (146)
Q Consensus 45 -----------------------------------------------------------------~~s~~cttnclaPl~ 59 (146)
-.+++||||||+|++
T Consensus 82 ~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap~~~~p~~V~gvN~~~~~~~~~iIsnpsCtt~~l~~~l 161 (335)
T 1u8f_O 82 PSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAPLA 161 (335)
T ss_dssp GGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCSSSCBCCTTTTGGGCCTTCSEEECCCHHHHHHHHHH
T ss_pred HHHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccCCCCCCeEEeccCHHHhCCCCCEEECCChHHHHHHHHH
Confidence 013479999999999
Q ss_pred HHhhhceeeeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeecCCee
Q psy6886 60 KVIHDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPVANVS 139 (146)
Q Consensus 60 kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~~~~s 139 (146)
|.|+++|||++++|||+|++|++|+.+|+|++++||++|++++||||++||++++++|++|||+||++++++|||++++|
T Consensus 162 kpL~~~~gI~~~~~tt~~a~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~~g~ 241 (335)
T 1u8f_O 162 KVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTANVS 241 (335)
T ss_dssp HHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCGGGGSBTTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEEESCSSCE
T ss_pred HHHHHhCCcceeEEEEEeccccCccccccccccccccchhhhcCceeccCChhHHHHHHHHHhCCcEEEEEEEeccCCEE
Confidence 99999999999999999999999999999976799999999999999999999999999999999999999999999999
Q ss_pred EEEeEEC
Q psy6886 140 VVDLTVR 146 (146)
Q Consensus 140 ~~dlt~~ 146 (146)
++||++.
T Consensus 242 ~~~l~~~ 248 (335)
T 1u8f_O 242 VVDLTCR 248 (335)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999973
No 21
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.9e-40 Score=278.78 Aligned_cols=143 Identities=44% Similarity=0.669 Sum_probs=131.7
Q ss_pred cceeEeccCceeeeeeec---C--CCceEEEEecCCcchhhhhhhcccc-------------------------------
Q psy6886 2 SKIGINGFGRIGLNNLNS---Q--PCLRLVSMVSDVLDVLYSELLLPRE------------------------------- 45 (146)
Q Consensus 2 ~kv~ingfgriGr~v~r~---~--~~~~vva~Ind~~d~~y~~~~~~~~------------------------------- 45 (146)
+||||||||||||.++|+ + +++|||+ |||..|++|++|||||+
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eiva-in~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~d 79 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVA-INDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD 79 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEE-EECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEE-EEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEecCC
Confidence 589999999999999998 5 9999999 99988888888764110
Q ss_pred -------------------------------------------------------------------CCCCccccchhHH
Q psy6886 46 -------------------------------------------------------------------PSFVTVSNSLLTL 58 (146)
Q Consensus 46 -------------------------------------------------------------------~s~~cttnclaPl 58 (146)
.+++||||||+|+
T Consensus 80 p~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVId~~a~d~p~~~V~eVN~~~i~~~~~iIsNpsCttn~lap~ 159 (332)
T 1hdg_O 80 PSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAKGEDITVVIGCNEDQLKPEHTIISCASCTTNSIAPI 159 (332)
T ss_dssp GGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTCCEEECCCHHHHHHHHH
T ss_pred hHHCcccccCCCEEEECCccchhHHHHHHHHHcCCcEEEEeCCCCCCCceEEeccCHHHhCCCCcEEECCccHHHHHHHH
Confidence 1247999999999
Q ss_pred HHHhhhceeeeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeecCCe
Q psy6886 59 AKVIHDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPVANV 138 (146)
Q Consensus 59 ~kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~~~~ 138 (146)
+|.|+++|||++++|||+|++|++|+.+|+|+ ++||++|++++||||++||++++++|++|+|+||++++++|||++++
T Consensus 160 lkpL~~~~gI~~~~~ttvha~Sg~q~~~d~~~-~~~~~~r~~a~NiiP~~tg~a~ei~kvLp~l~gkl~~~a~rVP~~~g 238 (332)
T 1hdg_O 160 VKVLHEKFGIVSGMLTTVHSYTNDQRVLDLPH-KDLRRARAAAVNIIPTTTGAAKAVALVVPEVKGKLDGMAIRVPTPDG 238 (332)
T ss_dssp HHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBGGGCCEEECCTHHHHHHHHCGGGTTTEEEEEEEESCSSC
T ss_pred HHHHHHhcCeeEeEEEEEEeccchhhhhcCcc-cccccchhHhhCcccccCCcccchhhhCccccCCEEEEeEEccccCc
Confidence 99999999999999999999999999999985 79999999999999999999999999999999999999999999999
Q ss_pred eEEEeEEC
Q psy6886 139 SVVDLTVR 146 (146)
Q Consensus 139 s~~dlt~~ 146 (146)
|++||++.
T Consensus 239 ~l~~l~~~ 246 (332)
T 1hdg_O 239 SITDLTVL 246 (332)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999973
No 22
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=100.00 E-value=7.9e-40 Score=275.53 Aligned_cols=144 Identities=30% Similarity=0.517 Sum_probs=120.2
Q ss_pred CcceeEeccCceeeeeeec--C----CCceEEEEecCCcchhhhhhhccc------------------------------
Q psy6886 1 MSKIGINGFGRIGLNNLNS--Q----PCLRLVSMVSDVLDVLYSELLLPR------------------------------ 44 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~--~----~~~~vva~Ind~~d~~y~~~~~~~------------------------------ 44 (146)
|+||||||||||||.++|+ . +++++|+ |||..|++|++|||+|
T Consensus 2 ~ikVgI~G~G~iGr~l~r~l~~~~~~~~~eiva-i~~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~ 80 (339)
T 2x5j_O 2 TVRVAINGFGRIGRNVVRALYESGRRAEITVVA-INELADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLHE 80 (339)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTSGGGTEEEEE-EECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECC
T ss_pred CeEEEEECcCHHHHHHHHHHHcCCCCCCEEEEE-EeCCCCHHHHHHHhcccccCCCCCceEEEcCCeeEECCEEEEEEec
Confidence 3899999999999999998 3 6899999 9998777776665410
Q ss_pred ---------------------------------------------------------------------cCCCCccccch
Q psy6886 45 ---------------------------------------------------------------------EPSFVTVSNSL 55 (146)
Q Consensus 45 ---------------------------------------------------------------------~~s~~cttncl 55 (146)
-.+++||||||
T Consensus 81 ~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~ad~d~p~~~V~gvN~~~~~~~~~iIsnpsCttn~l 160 (339)
T 2x5j_O 81 RSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTNCI 160 (339)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHHHH
T ss_pred CChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEeccccCCCCceeecccCHHHhcCCCCEEECCCcHHHHH
Confidence 01235999999
Q ss_pred hHHHHHhhhceeeeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeec
Q psy6886 56 LTLAKVIHDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPV 135 (146)
Q Consensus 56 aPl~kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~ 135 (146)
+|++|.|+++|||++++|||+|++|++|+.+|+|+ ++||++|++++||||++||++++++|++|+|+||++++++|||+
T Consensus 161 ap~lkpL~~~~gI~~~~~ttvha~Tg~q~~~d~~~-~d~r~~r~a~~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~rVP~ 239 (339)
T 2x5j_O 161 IPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYH-PDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVPT 239 (339)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEECCC------------CTTTTSCCCCCCEEECCCHHHHHHHHSGGGTTSEEEEEEECSS
T ss_pred HHHHHHHHHccCcceeeEEEEEecccccccccccc-ccccchhhHHhCcccccCChHHHHHHHHHHhcCcEEEEEEEecc
Confidence 99999999999999999999999999999999986 68999999999999999999999999999999999999999999
Q ss_pred CCeeEEEeEEC
Q psy6886 136 ANVSVVDLTVR 146 (146)
Q Consensus 136 ~~~s~~dlt~~ 146 (146)
+++|++|+++.
T Consensus 240 ~~g~~~~l~v~ 250 (339)
T 2x5j_O 240 INVTAIDLSVT 250 (339)
T ss_dssp CSCEEEEEEEE
T ss_pred cCcEEEEEEEE
Confidence 99999999973
No 23
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=99.97 E-value=2.4e-33 Score=236.19 Aligned_cols=89 Identities=21% Similarity=0.292 Sum_probs=83.0
Q ss_pred CCCccccchhHHHHHhhhceeeeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeec----ccCccceeeeeecCC
Q psy6886 47 SFVTVSNSLLTLAKVIHDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPA----ATGAAKAVGKVIPAL 122 (146)
Q Consensus 47 s~~cttnclaPl~kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~----sTgaakav~kviP~L 122 (146)
+++||||||+|++|.||++|||++++|||+|++|. | |+++|++++||||+ +||++|+++|++|+|
T Consensus 141 n~sCtT~~lap~lk~L~~~fgI~~~~vtT~~a~sg-------~----~~~~r~~~~NiiP~~i~~~tg~~k~~~kilp~l 209 (343)
T 2yyy_A 141 VVSCNTTGLCRILYAINSIADIKKARIVLVRRAAD-------P----NDDKTGPVNAITPNPVTVPSHHGPDVVSVVPEF 209 (343)
T ss_dssp ECCHHHHHHHHHHHHHHTTSEEEEEEEEEEEESSC-------T----TCSSCCCSSCCEESSSSSSCTHHHHHHHHCGGG
T ss_pred ccchhhHHHHHHHHHHHHHcCceEEEEEeeeeccC-------c----CcchhhHHhcccCCCCCCCCcchHHHHHhhhcc
Confidence 46799999999999999999999999999999997 3 25667889999999 999999999999999
Q ss_pred CCCcceEEEeeecCCeeEEEeEEC
Q psy6886 123 NGKLTGMAFRVPVANVSVVDLTVR 146 (146)
Q Consensus 123 ~Gk~~g~a~~VP~~~~s~~dlt~~ 146 (146)
+||++++++|||++++++.||++.
T Consensus 210 ~gkl~~~avRVPv~~gh~~~l~v~ 233 (343)
T 2yyy_A 210 EGKILTSAVIVPTTLMHMHTLMVE 233 (343)
T ss_dssp TTSEEEEEEEESCSSCEEEEEEEE
T ss_pred ccceeeEEEEecccceEEEEEEEE
Confidence 999999999999999999999973
No 24
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=99.91 E-value=1.5e-25 Score=187.94 Aligned_cols=88 Identities=17% Similarity=0.244 Sum_probs=78.1
Q ss_pred CCCCccccchhHHHHHhhhceeeeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeec----ccCccceeeeeecC
Q psy6886 46 PSFVTVSNSLLTLAKVIHDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPA----ATGAAKAVGKVIPA 121 (146)
Q Consensus 46 ~s~~cttnclaPl~kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~----sTgaakav~kviP~ 121 (146)
.+++|+||||+|++|.|+++|||+++.|||+|+++. | +++ .|++.+||+|+ +|++++++.|++|+
T Consensus 135 snpsCtt~~l~~~lk~L~~~~gI~~~~~tt~~~~~~-------~-~~~---~~~~~~niip~~~~i~t~~a~ev~~vlp~ 203 (340)
T 1b7g_O 135 RVVSCNTTALLRTICTVNKVSKVEKVRATIVRRAAD-------Q-KEV---KKGPINSLVPDPATVPSHHAKDVNSVIRN 203 (340)
T ss_dssp EECCHHHHHHHHHHHHHHTTSCEEEEEEEEEEESSC-------T-TCC---SCCCSSCCEESSSSSSCTHHHHHHTTSTT
T ss_pred ccCCcHHHHHHHHHHHHHHhCCeEEEEEEEEeccCC-------c-ccc---hHHHHcCCCCCCcCCCCCchhHHHHhCCC
Confidence 356899999999999999999999999999998763 3 233 44678899999 89999999999999
Q ss_pred CCCCcceEEEeeecCCeeEEEeEEC
Q psy6886 122 LNGKLTGMAFRVPVANVSVVDLTVR 146 (146)
Q Consensus 122 L~Gk~~g~a~~VP~~~~s~~dlt~~ 146 (146)
|+ ++++++|||++++|+.|+++.
T Consensus 204 l~--l~~~a~rVPv~~gh~~~l~v~ 226 (340)
T 1b7g_O 204 LD--IATMAVIAPTTLMHMHFINIT 226 (340)
T ss_dssp CE--EEEEEEEESCSSCEEEEEEEE
T ss_pred Cc--EEEEEEEeccCCeEEEEEEEE
Confidence 96 999999999999999999973
No 25
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=99.87 E-value=3.5e-23 Score=172.54 Aligned_cols=83 Identities=22% Similarity=0.281 Sum_probs=76.6
Q ss_pred CCCccccchhHHHHHhhhceeeeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeec---ccCccceeeeeecCCC
Q psy6886 47 SFVTVSNSLLTLAKVIHDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPA---ATGAAKAVGKVIPALN 123 (146)
Q Consensus 47 s~~cttnclaPl~kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~---sTgaakav~kviP~L~ 123 (146)
+++|+||||+|++|.+++. |++|.|+|+|+++.. ||.+|++++||+|+ ++|++++++|++| |+
T Consensus 138 ~~~C~t~~l~P~~~~l~~~--I~~g~i~ti~a~s~~-----------~~~~r~~~~niiP~i~~~~g~~~~i~~~l~-l~ 203 (334)
T 2czc_A 138 VVSCNTTGLVRTLSAIREY--ADYVYAVMIRRAADP-----------NDTKRGPINAIKPTVEVPSHHGPDVQTVIP-IN 203 (334)
T ss_dssp ECCHHHHHHHHHHHHHGGG--EEEEEEEEEEESSCT-----------TCCSCCCSSCCEECCSSSCTHHHHHTTTSC-CC
T ss_pred ecCcHHHHHHHHHHHHHHH--hccccEEEEEEecCc-----------cccccChhhcEEeccCCCCchhhhhheEEE-EE
Confidence 3579999999999999987 999999999999874 56678889999999 9999999999999 97
Q ss_pred CCcceEEEeeecCCeeEEEeEE
Q psy6886 124 GKLTGMAFRVPVANVSVVDLTV 145 (146)
Q Consensus 124 Gk~~g~a~~VP~~~~s~~dlt~ 145 (146)
++++++|||+.++++.|+++
T Consensus 204 --l~~~~~rVPv~~~~~~~~~~ 223 (334)
T 2czc_A 204 --IETMAFVVPTTLMHVHSVMV 223 (334)
T ss_dssp --EEEEEEEESCSSCEEEEEEE
T ss_pred --EEEEEEEcCCCceEEEEEEE
Confidence 99999999999999999987
No 26
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=99.87 E-value=1.7e-23 Score=175.06 Aligned_cols=100 Identities=21% Similarity=0.147 Sum_probs=76.2
Q ss_pred CCCccccchhHHHHHhhhceeeeeeeeeeeeccCcccc-ccCCCCC-----------CCCcCcccccceeeeccc-----
Q psy6886 47 SFVTVSNSLLTLAKVIHDNFEIVEGLMTTVHATTATQK-TVDGPSG-----------KLWRDGRGAAQNIIPAAT----- 109 (146)
Q Consensus 47 s~~cttnclaPl~kvi~~~fgI~~g~mTtvha~t~~Q~-~~D~p~~-----------~~~r~~r~a~~niIP~sT----- 109 (146)
+++|+|||++|.+|.|+++|+|+++.|||+|+++..|+ .+|.++. .+|+++|++++|++|.++
T Consensus 128 np~C~tt~~~~~l~pL~~~~~i~~~~vtt~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~ 207 (336)
T 2r00_A 128 NPNCSTIQMLVALKPIYDAVGIERINVTTYQSVSGAGKAGIDELAGQTAKLLNGYPAETNTFSQQIAFNCIPQIDQFMDN 207 (336)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCEEEEEEEEEEESSSCCTTSCC-----------------------------CCBCTTTCS
T ss_pred CCChHHHHHHHHHHHHHHhCCccEEEEEEEEecccCChhhhHHHHHHHHHhhcCCCCCccccchhhhcCcccccCCcccC
Confidence 47899999999999999999999999999999999975 7887653 378899999999999986
Q ss_pred C-------ccceeeeeecCCCCCcceEEEeeecCCeeEEEeEEC
Q psy6886 110 G-------AAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVR 146 (146)
Q Consensus 110 g-------aakav~kviP~L~Gk~~g~a~~VP~~~~s~~dlt~~ 146 (146)
| .++.+.|++|++++|++++++|||++++++.|+++.
T Consensus 208 gh~~Ee~k~~~e~~kil~~~~~~v~~t~~rVP~~~g~~~~~~~~ 251 (336)
T 2r00_A 208 GYTKEEMKMVWETQKIFNDPSIMVNPTCVRVPVFYGHAEAVHVE 251 (336)
T ss_dssp SCBHHHHHHHHHHHHHTTCTTCEEEEEEEEESSCBSEEEEEEEE
T ss_pred CccHHHHHHHHHHHHHhCCCCCcEEEEeEEeccCcEEEEEEEEE
Confidence 7 578889999999999999999999999999999873
No 27
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=99.84 E-value=4.8e-22 Score=166.49 Aligned_cols=86 Identities=23% Similarity=0.313 Sum_probs=76.9
Q ss_pred CCCccccchhHHHHHhhhceeeeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeec----ccCccceeeeeecCC
Q psy6886 47 SFVTVSNSLLTLAKVIHDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPA----ATGAAKAVGKVIPAL 122 (146)
Q Consensus 47 s~~cttnclaPl~kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~----sTgaakav~kviP~L 122 (146)
+++|+|||++|.+|.|+++|||++++|||+|+++. | ++.+|++++|++|. +++.++.++|++ +|
T Consensus 137 np~C~tt~l~~~l~pL~~~~gI~~~~vtt~~a~s~-------p----~~~~~~~~~NiiP~~i~~~~~~~~ei~kil-~l 204 (337)
T 1cf2_P 137 VVSCNTTGLCRTLKPLHDSFGIKKVRAVIVRRGAD-------P----AQVSKGPINAIIPNPPKLPSHHGPDVKTVL-DI 204 (337)
T ss_dssp ECCHHHHHHHHHHHHHHHHHCEEEEEEEEEEESSC-------T----TCTTCCCSSCCEESSSSSSCTHHHHHHTTS-CC
T ss_pred cCCcHHHHHHHHHHHHHHhcCcceeEEEEEEEeec-------C----CccccchhcCEEeccCCCCCcchHHHHhhh-ee
Confidence 56899999999999999999999999999999886 3 23445678999999 889899999999 98
Q ss_pred CCCcceEEEeeecCCeeEEEeEEC
Q psy6886 123 NGKLTGMAFRVPVANVSVVDLTVR 146 (146)
Q Consensus 123 ~Gk~~g~a~~VP~~~~s~~dlt~~ 146 (146)
+ ++++++|||+.++++.|+++.
T Consensus 205 ~--v~~t~~rVPv~~g~~~~~~v~ 226 (337)
T 1cf2_P 205 N--IDTMAVIVPTTLMHQHNVMVE 226 (337)
T ss_dssp C--EEEEEEEESCCSCEEEEEEEE
T ss_pred E--EEEEEEEcCccCeEEEEEEEE
Confidence 5 999999999999999999873
No 28
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=99.77 E-value=4.1e-20 Score=154.46 Aligned_cols=99 Identities=18% Similarity=0.226 Sum_probs=93.1
Q ss_pred CCCCccccchhHHHHHhhhceeeeeeeeeeeeccCcc------------ccccCCCCCCCCcCcccccceeeecc-----
Q psy6886 46 PSFVTVSNSLLTLAKVIHDNFEIVEGLMTTVHATTAT------------QKTVDGPSGKLWRDGRGAAQNIIPAA----- 108 (146)
Q Consensus 46 ~s~~cttnclaPl~kvi~~~fgI~~g~mTtvha~t~~------------Q~~~D~p~~~~~r~~r~a~~niIP~s----- 108 (146)
.+++|+|||++|.+|.|+++|+|+++.|||+|+++.. |+++|+++.++|+++|.+++|++|.+
T Consensus 121 anp~C~tt~~~~~l~pL~~~~~I~~~~vtt~~~~SgaG~~~~~~l~~q~~~~~~~~~~~~~~~~~~~a~niiP~~~~~~~ 200 (331)
T 2yv3_A 121 ANPNCTTAILAMALWPLHRAFQAKRVIVATYQAASGAGAKAMEELLTETHRFLHGEAPKAEAFAHPLPFNVIPHIDAFQE 200 (331)
T ss_dssp ECCCHHHHHHHHHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHHTSSCCCCCSSSSCCTTCCBSCCSCBCT
T ss_pred ECCCHHHHHHHHHHHHHHHhCCceEEEEEEEeecccCCcchhHHHHHHHHhhhcCccccccccchhhhcCcccccCcccc
Confidence 3578999999999999999999999999999999999 99999988789999999999999999
Q ss_pred ---cCcccee----eeee--cCCCCCcceEEEeeecCCeeEEEeEEC
Q psy6886 109 ---TGAAKAV----GKVI--PALNGKLTGMAFRVPVANVSVVDLTVR 146 (146)
Q Consensus 109 ---Tgaakav----~kvi--P~L~Gk~~g~a~~VP~~~~s~~dlt~~ 146 (146)
|+.++++ +|++ |+|+ ++++++|||++++++.|+++.
T Consensus 201 ~~ht~e~~~i~~e~~kil~~~~l~--v~~~~~rVP~~~g~~~~~~~~ 245 (331)
T 2yv3_A 201 NGYTREEMKVVWETHKIFGDDTIR--ISATAVRVPTLRAHAEAVSVE 245 (331)
T ss_dssp TSCBHHHHHHHHHHHHHTTCTTCE--EEEECCBCSCSSEEEEEEEEE
T ss_pred CCCcHHHHHHHHHHHHHhCCCCce--EEEEEEEeccCceEEEEEEEE
Confidence 9999999 9998 9995 999999999999999999873
No 29
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=99.73 E-value=2e-19 Score=150.66 Aligned_cols=101 Identities=15% Similarity=0.143 Sum_probs=89.1
Q ss_pred CCCCccccchhHHHHHhhhceeeeeeeeeeeeccCccccc-cCCCCC--CCCcCc---------ccccceeeeccc----
Q psy6886 46 PSFVTVSNSLLTLAKVIHDNFEIVEGLMTTVHATTATQKT-VDGPSG--KLWRDG---------RGAAQNIIPAAT---- 109 (146)
Q Consensus 46 ~s~~cttnclaPl~kvi~~~fgI~~g~mTtvha~t~~Q~~-~D~p~~--~~~r~~---------r~a~~niIP~sT---- 109 (146)
.+++|+|||++|.+|.|+++|+|+++.|||+|+++..|+. +|.++. ++||++ |.+++|++|.++
T Consensus 129 anp~C~tt~~~~~l~pL~~~~~i~~~~v~t~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~ 208 (340)
T 2hjs_A 129 SSPCAVAAELCEVLAPLLATLDCRQLNLTACLSVSSLGREGVKELARQTAELLNARPLEPRLFDRQIAFNLLAQVGAVDA 208 (340)
T ss_dssp ECCCHHHHHHHHHHHHHTTTCCEEEEEEEEEECGGGGCHHHHHHHHHHHHHHHTTCCCCCSSSSSCCTTCCBSSSSCBCT
T ss_pred EcCCHHHHHHHHHHHHHHHhcCcceEEEEEecccCCCCccccHhHHHHHHHHhccCCccccccchhhccCeeccccCccc
Confidence 3578999999999999999999999999999999999964 665431 567764 667899999998
Q ss_pred -C-------ccceeeeeecCCCCCcceEEEeeecCCeeEEEeEEC
Q psy6886 110 -G-------AAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVR 146 (146)
Q Consensus 110 -g-------aakav~kviP~L~Gk~~g~a~~VP~~~~s~~dlt~~ 146 (146)
| +++.++|++|++++|++++++|||++++++.|++++
T Consensus 209 ~gh~~Ee~k~~~~~~kil~~~~~~v~~~~~rVP~~~g~~~~~~~~ 253 (340)
T 2hjs_A 209 EGHSAIERRIFAEVQALLGERIGPLNVTCIQAPVFFGDSLSVTLQ 253 (340)
T ss_dssp TSCBHHHHHHHHHHHHHTGGGBCCEEEEEEECSCSSCEEEEEEEE
T ss_pred CCccHHHHHHHHHHHHHhCCCCCcEEEEeEEcCcCceEEEEEEEE
Confidence 6 788899999999999999999999999999999873
No 30
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=99.68 E-value=4.5e-18 Score=142.66 Aligned_cols=92 Identities=18% Similarity=0.119 Sum_probs=81.8
Q ss_pred CCCCccccchhHHHHHhhhceeeeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeecccCc-ccee---eeeecC
Q psy6886 46 PSFVTVSNSLLTLAKVIHDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGA-AKAV---GKVIPA 121 (146)
Q Consensus 46 ~s~~cttnclaPl~kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~sTga-akav---~kviP~ 121 (146)
.+++|+|||++|.++.|+++|||+++.|+|+|+++..|+. ++ . .|.+++|++|.+++. .|.+ .|++|+
T Consensus 147 anpgC~tt~~~l~l~pL~~~~gi~~i~v~t~~~~SGaG~~--~~---~---~~~~~~ni~py~~~~e~k~~~E~~~~l~~ 218 (350)
T 2ep5_A 147 KNPNCTAAIMSMPIKPLIEIATKSKIIITTLQAVSGAGYN--GI---S---FMAIEGNIIPYIKGEEDKIAKELTKLNGK 218 (350)
T ss_dssp ECCCHHHHHHHHHHGGGHHHHHTSEEEEEEEECGGGGCSS--SS---B---HHHHTTCCBCCCTTHHHHHHHHHHHHTCE
T ss_pred EcCchHHHHHHHHHHHHHHhcCCcEEEEEEEEecCcCCCC--CC---C---ChHHhCCEEeccCCcchHHHHHHHHHHhh
Confidence 4578999999999999999999999999999999999986 22 2 345788999999997 8877 689999
Q ss_pred CCC--------CcceEEEeeecCCeeEEEeEE
Q psy6886 122 LNG--------KLTGMAFRVPVANVSVVDLTV 145 (146)
Q Consensus 122 L~G--------k~~g~a~~VP~~~~s~~dlt~ 145 (146)
|+| +++++++|||+.++++.++++
T Consensus 219 ~~g~~~~~~~~~v~~t~~rvP~~~g~~~~i~~ 250 (350)
T 2ep5_A 219 LENNQIIPANLDSTVTSIRVPTRVGHMGVINI 250 (350)
T ss_dssp ECSSSEECCCCEEEEEEEECSCSSCEEEEEEE
T ss_pred ccccccccccccEEEEeEEecccceEEEEEEE
Confidence 988 799999999999999999987
No 31
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=99.63 E-value=6.6e-17 Score=135.58 Aligned_cols=90 Identities=8% Similarity=-0.106 Sum_probs=77.8
Q ss_pred CCCCccccchhHHHHHhhhceeee--eeeeeeeeccCccccc-cCCCCCCCCcCcccccceeeecccCccceeeeeecCC
Q psy6886 46 PSFVTVSNSLLTLAKVIHDNFEIV--EGLMTTVHATTATQKT-VDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPAL 122 (146)
Q Consensus 46 ~s~~cttnclaPl~kvi~~~fgI~--~g~mTtvha~t~~Q~~-~D~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L 122 (146)
.+++|+|||++|.++.|+++|+|+ ++.|+|+|+++..|+. .|.++ .+| +.+|++|.++++ .+++||+
T Consensus 145 anp~C~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~~-~~~-----~~~n~~py~~~~----h~~~pei 214 (345)
T 2ozp_A 145 AGAGCNATATLLGLYPLLKAGVLKPTPIFVTLLISTSAGGAEASPASH-HPE-----RAGSIRVYKPTG----HRHTAEV 214 (345)
T ss_dssp ECCCHHHHHHHHHHHHHHHTTCBCSSCEEEEEEECSGGGCSSCCGGGC-HHH-----HTTCCEEEECSC----CTHHHHH
T ss_pred eCCCcHHHHHHHHHHHHHHhcCCCCCeEEEEEEEEccccCcccccccc-chh-----hccccccCCCCC----ccChHhH
Confidence 356799999999999999999999 9999999999999964 55442 233 467999999885 7889999
Q ss_pred C-----C-CcceEEEeeecCCeeEEEeEE
Q psy6886 123 N-----G-KLTGMAFRVPVANVSVVDLTV 145 (146)
Q Consensus 123 ~-----G-k~~g~a~~VP~~~~s~~dlt~ 145 (146)
+ + +++++++|||+.++++.++++
T Consensus 215 ~~~l~~~~~v~~~~~rvP~~~g~~~~i~~ 243 (345)
T 2ozp_A 215 VENLPGRPEVHLTAIATDRVRGILMTAQC 243 (345)
T ss_dssp HHTSSSCCCEEEEEEECSCSSCEEEEEEE
T ss_pred HHHhCCCCCeEEEEEEeccccEEEEEEEE
Confidence 7 6 899999999999999999986
No 32
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=99.52 E-value=2.3e-15 Score=127.49 Aligned_cols=100 Identities=15% Similarity=0.080 Sum_probs=87.3
Q ss_pred CCCCccccchhHHHHHhhhceeeeeeeeeeeeccCccc--cc-----------------cCCCCCC--CCcC--------
Q psy6886 46 PSFVTVSNSLLTLAKVIHDNFEIVEGLMTTVHATTATQ--KT-----------------VDGPSGK--LWRD-------- 96 (146)
Q Consensus 46 ~s~~cttnclaPl~kvi~~~fgI~~g~mTtvha~t~~Q--~~-----------------~D~p~~~--~~r~-------- 96 (146)
.+++|+|+|++|.++.|+++|+|+++.|+|+|+++..+ .. .|+|+.+ |||+
T Consensus 131 anp~Cttt~~~~al~pL~~~~~I~~~~vtt~~a~SGaG~~~~~el~~~~~~l~~~~~~~~~~~~~~ild~~r~~~~~~~~ 210 (367)
T 1t4b_A 131 VGGNCTVSLMLMSLGGLFANDLVDWVSVATYQAASGGGARHMRELLTQMGHLYGHVADELATPSSAILDIERKVTTLTRS 210 (367)
T ss_dssp EECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHTHHHHTCTTCCHHHHHHHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHHHHHcCCCcEEEEEEEeccccccccchHHHHHHHhhhhccccccccccccchhhhhhcccccccc
Confidence 46789999999999999999999999999999999984 32 4667532 7776
Q ss_pred --------cccccceeeecccC------------ccceeeeeecC-CCCCcceEEEeeecCCeeEEEeEE
Q psy6886 97 --------GRGAAQNIIPAATG------------AAKAVGKVIPA-LNGKLTGMAFRVPVANVSVVDLTV 145 (146)
Q Consensus 97 --------~r~a~~niIP~sTg------------aakav~kviP~-L~Gk~~g~a~~VP~~~~s~~dlt~ 145 (146)
+|.+++|+||.+++ +++.+.|++++ .+.+++++++|||+.++++.++++
T Consensus 211 ~~~~~~~f~~~~a~NiiP~~~~~~~~~~t~EE~k~~~e~~kil~~~~~~~v~~t~vrVPv~~g~~~~v~v 280 (367)
T 1t4b_A 211 GELPVDNFGVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKILNTSSVIPVDGLCVRVGALRCHSQAFTI 280 (367)
T ss_dssp TCSCCTTTSSCCTTCEESCCSCBCTTSCBHHHHHHHHHHHHHHTCSSCCCEEEECCEESCSSEEEEEEEE
T ss_pred ccCcccccchhhhCceEEEecCccccCccHHHHHHHHHHHHHhCcCCCceEEEEEEEcCccceEEEEEEE
Confidence 47789999999998 88999999977 667999999999999999999986
No 33
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=99.35 E-value=9e-14 Score=117.14 Aligned_cols=90 Identities=7% Similarity=0.000 Sum_probs=78.1
Q ss_pred CCCCccccchhHHHHHhhhceeee--eeeeeeeeccCccccc-cCCCCCCCCcCcccccceeeecccCccceeeeeecCC
Q psy6886 46 PSFVTVSNSLLTLAKVIHDNFEIV--EGLMTTVHATTATQKT-VDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPAL 122 (146)
Q Consensus 46 ~s~~cttnclaPl~kvi~~~fgI~--~g~mTtvha~t~~Q~~-~D~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L 122 (146)
.+++|+|||++|.++.|+++|+|+ ++.|+|+|+++..|+. .|.++ .+| +.+|++|.++++ .|.+||+
T Consensus 159 anpgC~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~~-~~~-----~~~ni~py~~~~----h~h~pEi 228 (359)
T 1xyg_A 159 ANPGCYPTTIQLPLVPLLKANLIKHENIIIDAKSGVSGAGRGAKEANL-YSE-----IAEGISSYGVTR----HRHVPEI 228 (359)
T ss_dssp ECCCHHHHHHHHHHHHHHHTTCBCSSSCEEEEEEEGGGGCSCCCGGGB-HHH-----HTTCCEECSCSC----CTHHHHH
T ss_pred ECCCcHHHHHHHHHHHHHHcCCCCCCeEEEEEEEEccccCcccchhhh-hHH-----HhcCeecccccc----cccHHHH
Confidence 467899999999999999999999 9999999999999984 55442 233 457999999985 6788998
Q ss_pred C---C-------CcceEEEeeecCCeeEEEeEE
Q psy6886 123 N---G-------KLTGMAFRVPVANVSVVDLTV 145 (146)
Q Consensus 123 ~---G-------k~~g~a~~VP~~~~s~~dlt~ 145 (146)
+ | +++++++|||+.++++.++++
T Consensus 229 ~~~l~~~~~~~~~v~~t~~rvP~~~G~~~~i~~ 261 (359)
T 1xyg_A 229 EQGLSDVAQSKVTVSFTPHLMPMIRGMQSTIYV 261 (359)
T ss_dssp HHHHHHHHTSCCCCEEECEEESSSSCEEEEEEE
T ss_pred HHHHHHhcCCCCCEEEEEEEecccceEEEEEEE
Confidence 8 6 889999999999999999986
No 34
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=99.18 E-value=2.7e-12 Score=107.48 Aligned_cols=92 Identities=20% Similarity=0.194 Sum_probs=75.9
Q ss_pred CCCCccccchhHHHHHhhhceeeeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeecccCc-ccee---eeeecC
Q psy6886 46 PSFVTVSNSLLTLAKVIHDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGA-AKAV---GKVIPA 121 (146)
Q Consensus 46 ~s~~cttnclaPl~kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~sTga-akav---~kviP~ 121 (146)
.+++|+|||++|.++.|+++|||+++.++|+|+++..|+. ++ .| +.++.|++|.+++. .+.+ .|.+++
T Consensus 153 anpgC~tt~~~l~l~pL~~~~gi~~~~v~t~~~~SGaG~~--~~---~~---~~~~~ni~py~~~~~~k~~~Ei~~~l~~ 224 (354)
T 1ys4_A 153 TNPNCSTICAVITLKPIMDKFGLEAVFIATMQAVSGAGYN--GV---PS---MAILDNLIPFIKNEEEKMQTESLKLLGT 224 (354)
T ss_dssp ECCCHHHHHHHHHHHHHHHHHCCSEEEEEEEBCSGGGCTT--TS---CH---HHHTTCCBSCCTTHHHHHHHHHHHHTSE
T ss_pred ECCCHHHHHHHHHHHHHHHhcCCcEEEEEEEEEcCcCCcc--cc---cc---hHHhCCEEeccCchhhHHHHHHHHHHhc
Confidence 4578999999999999999999999999999999999986 22 34 35678999999985 4443 334555
Q ss_pred CCC--------CcceEEEeeecCCeeEEEeEE
Q psy6886 122 LNG--------KLTGMAFRVPVANVSVVDLTV 145 (146)
Q Consensus 122 L~G--------k~~g~a~~VP~~~~s~~dlt~ 145 (146)
++| +++++++|||+.++++.++++
T Consensus 225 ~~g~~~~~~~~~v~~~~~rvP~~~G~~~~i~~ 256 (354)
T 1ys4_A 225 LKDGKVELANFKISASCNRVAVIDGHTESIFV 256 (354)
T ss_dssp EETTEEECCCCEEEEECCBCSCSSCEEEEEEE
T ss_pred cccccccCCCceEEEEEEEecccceEEEEEEE
Confidence 555 788999999999999999986
No 35
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=99.16 E-value=1.1e-11 Score=104.57 Aligned_cols=92 Identities=15% Similarity=0.239 Sum_probs=80.4
Q ss_pred CCCCccccchhHHHHHhhhceeeeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeecccCc-cce---eeeeecC
Q psy6886 46 PSFVTVSNSLLTLAKVIHDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGA-AKA---VGKVIPA 121 (146)
Q Consensus 46 ~s~~cttnclaPl~kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~sTga-aka---v~kviP~ 121 (146)
.+++|+|+|+++.++.|+++|||++..++|+|+++..|+. +.+ . +.++.|++|..++. .|. +.|++++
T Consensus 149 anPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~--~~~---~---~~~~~N~ipy~~~~e~k~~~Ei~kil~~ 220 (359)
T 4dpk_A 149 TTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP--GIP---S---LDVVDNILPLGDGYDAKTIKEIFRILSE 220 (359)
T ss_dssp ECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEECSGGGCSS--CSB---G---GGTTTCCEECCHHHHHHHHHHHHHHHHT
T ss_pred ECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc--Ccc---C---hHHhCCeEeecCcHHHHHHHHHHHHHhh
Confidence 4888999999999999999999999999999999999985 221 1 34678999999986 565 7889999
Q ss_pred CCC----------CcceEEEeeecCCeeEEEeEE
Q psy6886 122 LNG----------KLTGMAFRVPVANVSVVDLTV 145 (146)
Q Consensus 122 L~G----------k~~g~a~~VP~~~~s~~dlt~ 145 (146)
|+| ++++++.|||+.++++.++++
T Consensus 221 l~g~~~~~~~~~~~v~~t~~rVPv~rG~~~tv~v 254 (359)
T 4dpk_A 221 VKRNVDEPKLEDVSLAATTHRIATIHGHYEVLYV 254 (359)
T ss_dssp SCCSCCCSCGGGCEEEEEEEECSCSSCEEEEEEE
T ss_pred cccccccccccCCceEEEEEEecccccEEEEEEE
Confidence 988 789999999999999999976
No 36
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=99.13 E-value=1.1e-11 Score=104.57 Aligned_cols=92 Identities=15% Similarity=0.253 Sum_probs=80.3
Q ss_pred CCCCccccchhHHHHHhhhceeeeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeecccCc-cce---eeeeecC
Q psy6886 46 PSFVTVSNSLLTLAKVIHDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGA-AKA---VGKVIPA 121 (146)
Q Consensus 46 ~s~~cttnclaPl~kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~sTga-aka---v~kviP~ 121 (146)
.+++|+|+|+++.++.|+++|||++..++|+|+++..|+. +.+ .+.++.|++|..++. .|. +.|++++
T Consensus 149 anPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~--~~~------~~~~~~N~ipy~~~~e~k~~~Ei~kil~~ 220 (359)
T 4dpl_A 149 TTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP--GIP------SLDVVDNILPLGDGYDAKTIKEIFRILSE 220 (359)
T ss_dssp ECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEBCGGGGCSS--CSB------HHHHTTCCEECCHHHHHHHHHHHHHHHTT
T ss_pred ECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc--Ccc------ChHHhCCeEeecCcHHHHHHHHHHHHHhh
Confidence 4888999999999999999999999999999999999985 221 134678999999986 565 7889999
Q ss_pred CCC----------CcceEEEeeecCCeeEEEeEE
Q psy6886 122 LNG----------KLTGMAFRVPVANVSVVDLTV 145 (146)
Q Consensus 122 L~G----------k~~g~a~~VP~~~~s~~dlt~ 145 (146)
|+| ++++++.|||+.++++.++++
T Consensus 221 l~g~~~~~~~~~~~v~~t~~rVPv~rG~~~tv~v 254 (359)
T 4dpl_A 221 VKRNVDEPKLEDVSLAATTHRIATIHGHYEVLYV 254 (359)
T ss_dssp SCCSSCCSCGGGCEEEEECEECSCSSCEEEEEEE
T ss_pred cccccccccccCCceEEEEEEecccccEEEEEEE
Confidence 988 789999999999999999976
No 37
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=98.86 E-value=9.2e-10 Score=92.29 Aligned_cols=88 Identities=8% Similarity=-0.032 Sum_probs=74.9
Q ss_pred CCCCccccchhHHHHHhhh--ceeeeee-eeeeeeccCccc-cccCCCCCCCCcCcccccceeeecccCccceeeeeecC
Q psy6886 46 PSFVTVSNSLLTLAKVIHD--NFEIVEG-LMTTVHATTATQ-KTVDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPA 121 (146)
Q Consensus 46 ~s~~cttnclaPl~kvi~~--~fgI~~g-~mTtvha~t~~Q-~~~D~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~ 121 (146)
.+++|+|+|+++.++.|++ .|+++.. .++|+|+++..+ +..|+.+ .+++ |++|.+++. .+.+||
T Consensus 153 anPgC~tt~~~l~L~PL~~~g~~~~~~i~~v~t~~g~SGaG~~~~~~~~-~~~~-------n~~py~~~~----h~h~Pe 220 (337)
T 3dr3_A 153 AVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNS-FCEV-------SLQPYGVFT----HRHQPE 220 (337)
T ss_dssp ECCCHHHHHHHHHHHHHHHTTCBCTTSCCEEEEEECGGGGCSCCCSTTS-GGGC-------SEEECSTTT----CTHHHH
T ss_pred ecCChHHHHHHHHHHHHHHcCccCCCceEEEEEeeccccCCcccccccc-cccc-------ceEccCccc----ceechh
Confidence 4788999999999999998 6999999 899999999986 5555433 3333 899998886 578999
Q ss_pred CCC----CcceEEEeeecCCeeEEEeEE
Q psy6886 122 LNG----KLTGMAFRVPVANVSVVDLTV 145 (146)
Q Consensus 122 L~G----k~~g~a~~VP~~~~s~~dlt~ 145 (146)
+++ +++.++.|||+.++++.++++
T Consensus 221 i~~~l~~~v~ft~~rvPv~rG~~~ti~~ 248 (337)
T 3dr3_A 221 IATHLGADVIFTPHLGNFPRGILETITC 248 (337)
T ss_dssp HHHHHTSCCEEEEEEESSSSCEEEEEEE
T ss_pred HHhhhcCCEEEEEEEecccccEEEEEEE
Confidence 988 899999999999999999875
No 38
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=98.68 E-value=4.1e-09 Score=88.72 Aligned_cols=90 Identities=12% Similarity=-0.014 Sum_probs=74.6
Q ss_pred CCCccccchhHHHHHhhhceeee-eeeeeeeeccCcc-ccccCCCCCCCCcCcccccceeeecccCccceeeeeecCC--
Q psy6886 47 SFVTVSNSLLTLAKVIHDNFEIV-EGLMTTVHATTAT-QKTVDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPAL-- 122 (146)
Q Consensus 47 s~~cttnclaPl~kvi~~~fgI~-~g~mTtvha~t~~-Q~~~D~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L-- 122 (146)
++.|+|+|+++.++-|+++++|+ +..++|+|+++.. |+..|..+ .++++++..+.|++|+ .+.+||+
T Consensus 155 nPgC~tt~~~lal~PL~~~~~i~~~i~v~t~~g~SGaG~~~~~~~~-~~~~~~~~~ay~~~~~--------h~h~pEi~~ 225 (352)
T 2nqt_A 155 VPGCYPTAALLALFPALAADLIEPAVTVVAVSGTSGAGRAATTDLL-GAEVIGSARAYNIAGV--------HRHTPEIAQ 225 (352)
T ss_dssp CCCHHHHHHHHHHHHHHHTTCSCSEEEEEEEECGGGGCSSCCGGGS-HHHHTTCCEECSTTTT--------STTHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHcCCCcceEEEEEEeccccCCcccccccc-HHHHhhhcccccCCCc--------ceecHHHHH
Confidence 46799999999999999999999 8899999999998 88777543 4577666666666651 2566776
Q ss_pred --------CCCcceEEEeeecCCeeEEEeEE
Q psy6886 123 --------NGKLTGMAFRVPVANVSVVDLTV 145 (146)
Q Consensus 123 --------~Gk~~g~a~~VP~~~~s~~dlt~ 145 (146)
+++++..+.|||+.++++.++++
T Consensus 226 e~~ki~~~~~~v~ft~~rvP~~rG~~~ti~~ 256 (352)
T 2nqt_A 226 GLRAVTDRDVSVSFTPVLIPASRGILATCTA 256 (352)
T ss_dssp HHHTTCSSCCEEEEEEEECSCSSCEEEEEEE
T ss_pred HHHHHhCCCCCEEEEEEEEccccEEEEEEEE
Confidence 67899999999999999999886
No 39
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=98.51 E-value=2e-08 Score=85.44 Aligned_cols=93 Identities=20% Similarity=0.206 Sum_probs=73.5
Q ss_pred CCCCccccchhHHHHHhhhcee-eeeeeeeeeeccCccccccCCCCCCCCcCcccccceeeecccCc-cce---eeeeec
Q psy6886 46 PSFVTVSNSLLTLAKVIHDNFE-IVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGA-AKA---VGKVIP 120 (146)
Q Consensus 46 ~s~~cttnclaPl~kvi~~~fg-I~~g~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~sTga-aka---v~kviP 120 (146)
.++.|+++|+.+.++-|+++|| |++..++|+++++..++... .++ +..+.|++|..++. .|. +.|+++
T Consensus 168 aNPgC~tt~~~laL~PL~~~~glI~~v~v~t~~gvSGAG~~~~----~~~---~~~~~N~~Py~~~~e~k~~~Ei~kiL~ 240 (381)
T 3hsk_A 168 CISNCSTAGLVAPLKPLVEKFGPIDALTTTTLQAISGAGFSPG----VSG---MDILDNIVPYISGEEDKLEWETKKILG 240 (381)
T ss_dssp EECCHHHHHHHHHHHHHHHHHCCEEEEEEEEEBCCCC----------CCH---HHHTTCCBCCCTTHHHHHHHHHHHHTC
T ss_pred ECCCcHHHHHHHHHHHHHHhcCCceEEEEEEeeccCCCCccCC----cch---hhhhcChhhcccchHHHHHHHHHHHhh
Confidence 4788999999999999999999 99899999999999887311 122 34678999999986 454 567778
Q ss_pred CCCC-------------CcceEEEeeecCCeeEEEeEE
Q psy6886 121 ALNG-------------KLTGMAFRVPVANVSVVDLTV 145 (146)
Q Consensus 121 ~L~G-------------k~~g~a~~VP~~~~s~~dlt~ 145 (146)
.++| +++....|||+.++.+.++++
T Consensus 241 ~l~~~~~~~~~~~~~~~~v~ft~~rVPv~rG~~~tv~v 278 (381)
T 3hsk_A 241 GVNAEGTEFVPIPESEMKVSAQCNRVPVIDGHTECISL 278 (381)
T ss_dssp EECTTSSSEECCCTTTCEEEEECCBCSCSSCCEEEEEE
T ss_pred hcccccccccccccCCCceEEEEEEeceeccEEEEEEE
Confidence 7777 788899999999999998875
No 40
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=97.82 E-value=9.7e-06 Score=68.58 Aligned_cols=100 Identities=9% Similarity=0.099 Sum_probs=67.8
Q ss_pred CCCCccccchhHHHHHhhhceeeeeeeeeeeeccCccccc-cC-----------------CCCCCCCc-----Ccccccc
Q psy6886 46 PSFVTVSNSLLTLAKVIHDNFEIVEGLMTTVHATTATQKT-VD-----------------GPSGKLWR-----DGRGAAQ 102 (146)
Q Consensus 46 ~s~~cttnclaPl~kvi~~~fgI~~g~mTtvha~t~~Q~~-~D-----------------~p~~~~~r-----~~r~a~~ 102 (146)
.+++|+|||++|.++.|+++|+|+++.|+|+|+++..-+- ++ .+..+.+. +-+..+.
T Consensus 124 anpgC~tt~~~l~l~pL~~~~~i~~i~v~t~~~vSGAG~~~~~~l~~~~~~~~~~~~~~~~~~~~~y~~~~~HrH~~ia~ 203 (366)
T 3pwk_A 124 ACPNCSTIQMMVALEPVRQKWGLDRIIVSTYQAVSGAGMGAILETQRELREVLNDGVKPCDLHAEILPSGGDKKHYPIAF 203 (366)
T ss_dssp ECCCHHHHHHHHHHHHHHHHHCCSEEEEEEEBCGGGGCHHHHHHHHHHHHHHHHHCCCGGGCCCSSSSCTTSSCCCCCTT
T ss_pred ECCCcHHHHHHHHHHHHHHhCCCcEEEEEEEEeccccCcchhhHHHHHHHHHhcccccccccCcccCCcccccccchhhc
Confidence 4788999999999999999999999999999999863221 10 00111111 1133567
Q ss_pred eeeeccc-----Cccceee-------eeecCCCCCcceEEEeeecCCeeEEEeEE
Q psy6886 103 NIIPAAT-----GAAKAVG-------KVIPALNGKLTGMAFRVPVANVSVVDLTV 145 (146)
Q Consensus 103 niIP~sT-----gaakav~-------kviP~L~Gk~~g~a~~VP~~~~s~~dlt~ 145 (146)
|++|+-. |-.+-.. |++....-+++....|||+..+.+..+++
T Consensus 204 NviP~I~~~~~~g~t~EE~k~~~E~~kil~~~~~~v~ftp~rVPv~rG~~~tv~v 258 (366)
T 3pwk_A 204 NALPQIDVFTDNDYTYEEMKMTKETKKIMEDDSIAVSATCVRIPVLSAHSESVYI 258 (366)
T ss_dssp CCBCCSSCBCTTSSBHHHHHHHHHHHHHTTCTTSEEEEECCBCSCSSCEEEEEEE
T ss_pred cccceecccccCCCcHHHHHHHHHHHHHhcCCCCCeEEEEEEechhccEEEEEEE
Confidence 9999842 3322222 34444555788889999999998877654
No 41
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=97.80 E-value=1.2e-05 Score=68.36 Aligned_cols=97 Identities=13% Similarity=0.101 Sum_probs=66.6
Q ss_pred CCCCccccchhHHHHHhhhceeeeeeeeeeeeccCccccc-------------------cCCCC----------------
Q psy6886 46 PSFVTVSNSLLTLAKVIHDNFEIVEGLMTTVHATTATQKT-------------------VDGPS---------------- 90 (146)
Q Consensus 46 ~s~~cttnclaPl~kvi~~~fgI~~g~mTtvha~t~~Q~~-------------------~D~p~---------------- 90 (146)
.+++|+|||++|.++.|+++|+|+++.++|+|+++..=+- ++.|+
T Consensus 134 anp~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGAG~~~~~el~~q~~~l~~~~~~~~~~p~~~ild~~~~~~~~~~~ 213 (377)
T 3uw3_A 134 IGGNCTVSLMLMALGGLFRENLVDWMTAMTYQAASGAGAQNMRELLAQMGTLNGAVAAQLADPASAILDIDRRVLAAMNG 213 (377)
T ss_dssp EECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHTTHHHHTCTTSCHHHHHHHHHHHHHS
T ss_pred EcCCHHHHHHHHHHHHHHHhCCCCEEEEeeeecccccchhhHHHHHHHHHHhhccccccccccccccccccccccccccc
Confidence 4889999999999999999999999999999999863110 01121
Q ss_pred ----CCCCcCcccccceeeecccCc------------cceeeeeecCC------CCCcceEEEeeecCCeeEEEeE
Q psy6886 91 ----GKLWRDGRGAAQNIIPAATGA------------AKAVGKVIPAL------NGKLTGMAFRVPVANVSVVDLT 144 (146)
Q Consensus 91 ----~~~~r~~r~a~~niIP~sTga------------akav~kviP~L------~Gk~~g~a~~VP~~~~s~~dlt 144 (146)
.+.| .+..+.|++|...+. ..-+.|++..+ .-+++....|||+..+-..-++
T Consensus 214 ~~~~~~~f--~~~ia~N~~P~i~~~~~~g~t~EE~ki~~E~~kilg~~~~~~~~~i~Vs~t~vrVPv~rGh~~tv~ 287 (377)
T 3uw3_A 214 DAMPTSQF--GVPLAGSLIPWIDKDLGNGMSREEWKGGAETNKILGKPAMGEPGSVPVDGLCVRIGAMRCHSQALT 287 (377)
T ss_dssp TTSCCTTT--SSCCTBSCBSCCSCBCSSSCBHHHHHHHHHHHHHHTCCCTTSTTCCCEEEECCBCSBSSEEEEEEE
T ss_pred cccccccc--cccccCceEEeecccccCCCCHHHHHHHHHHHHHhcccccccCCCceEEEEeEEecccceEEEEEE
Confidence 1111 122456999986431 22245666554 3467888999999988766554
No 42
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=97.75 E-value=1.8e-05 Score=67.12 Aligned_cols=37 Identities=8% Similarity=-0.162 Sum_probs=34.6
Q ss_pred CCCCccccchhHHHHHhhhceeeeeeeeeeeeccCcc
Q psy6886 46 PSFVTVSNSLLTLAKVIHDNFEIVEGLMTTVHATTAT 82 (146)
Q Consensus 46 ~s~~cttnclaPl~kvi~~~fgI~~g~mTtvha~t~~ 82 (146)
.+++|+|||++|.++.|+++|+|+++.++|+|+++..
T Consensus 130 anp~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGA 166 (370)
T 3pzr_A 130 VGGNCTVSLMLMALGGLYERGLVEWMSAMTYQAASGA 166 (370)
T ss_dssp EECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGT
T ss_pred EcCChHHHHHHHHHHHHHHhCCCcEEEEEeEEecccc
Confidence 4889999999999999999999999999999999863
No 43
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=97.37 E-value=8.1e-05 Score=62.39 Aligned_cols=36 Identities=17% Similarity=0.276 Sum_probs=34.1
Q ss_pred CCCCccccchhHHHHHhhhceeeeeeeeeeeeccCc
Q psy6886 46 PSFVTVSNSLLTLAKVIHDNFEIVEGLMTTVHATTA 81 (146)
Q Consensus 46 ~s~~cttnclaPl~kvi~~~fgI~~g~mTtvha~t~ 81 (146)
.+++|+|||++|.++.|+++|+|++..|+|+|+++.
T Consensus 125 anpgC~tt~~~l~l~pL~~~~~i~~i~v~t~~~~SG 160 (344)
T 3tz6_A 125 ANPNCTTMAAMPVLKVLHDEARLVRLVVSSYQAVSG 160 (344)
T ss_dssp ECCCHHHHHHHHHHHHHHHHHCEEEEEEEEEBCGGG
T ss_pred ECCCcHHHHHHHHHHHHHHhCCCceEEEEeccCCCc
Confidence 478899999999999999999999999999999986
No 44
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=96.49 E-value=0.00055 Score=57.30 Aligned_cols=31 Identities=19% Similarity=0.337 Sum_probs=28.2
Q ss_pred cceeEec-cCceeeeeeec---CCCceEEEEecCCc
Q psy6886 2 SKIGING-FGRIGLNNLNS---QPCLRLVSMVSDVL 33 (146)
Q Consensus 2 ~kv~ing-fgriGr~v~r~---~~~~~vva~Ind~~ 33 (146)
+||+|+| ||+|||.++|. ++++++++ ++|..
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~p~~elva-i~~~~ 51 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANHPHFQVTL-MTADR 51 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTCSSEEEEE-EBCST
T ss_pred cEEEEECcCCHHHHHHHHHHHcCCCcEEEE-EeCch
Confidence 6899999 99999999998 78899999 99863
No 45
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=95.94 E-value=0.0012 Score=54.77 Aligned_cols=29 Identities=24% Similarity=0.526 Sum_probs=26.5
Q ss_pred cceeEec-cCceeeeeeec---CCCceEEEEecC
Q psy6886 2 SKIGING-FGRIGLNNLNS---QPCLRLVSMVSD 31 (146)
Q Consensus 2 ~kv~ing-fgriGr~v~r~---~~~~~vva~Ind 31 (146)
+||+|+| +|+||+.++|. ++++++++ +++
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~-i~~ 41 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTA-LAA 41 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEE-EEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEE-EEc
Confidence 7999999 99999999998 68899999 974
No 46
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=95.19 E-value=0.0042 Score=51.46 Aligned_cols=30 Identities=20% Similarity=0.306 Sum_probs=26.4
Q ss_pred cceeEec-cCceeeeeeec-----CCCceEEEEecCC
Q psy6886 2 SKIGING-FGRIGLNNLNS-----QPCLRLVSMVSDV 32 (146)
Q Consensus 2 ~kv~ing-fgriGr~v~r~-----~~~~~vva~Ind~ 32 (146)
+||+|+| ||+|||.++|. ++.+++++ +++.
T Consensus 7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~-i~s~ 42 (340)
T 2hjs_A 7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHL-LASA 42 (340)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEE-EECT
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEE-EecC
Confidence 6899999 99999999987 48899999 8864
No 47
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=95.11 E-value=0.0021 Score=53.81 Aligned_cols=82 Identities=13% Similarity=0.241 Sum_probs=55.8
Q ss_pred ccchhHHHHH--hhhcee----eeee-eeeeeeccCccccccCCCCCCCCcCcccccceeeecccCccceeeeeecCCCC
Q psy6886 52 SNSLLTLAKV--IHDNFE----IVEG-LMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNG 124 (146)
Q Consensus 52 tnclaPl~kv--i~~~fg----I~~g-~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~G 124 (146)
.+.+|-|+|- .|++|. .+++ +...-+.++-.|+. | |...+|.+. .-.|+-+|||.+.+.++.-.||++
T Consensus 38 ~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~-d-p~~i~w~~~---gvDiVlesTG~f~s~e~a~~hl~a 112 (332)
T 3pym_A 38 NDYAAYMFKYDSTHGRYAGEVSHDDKHIIVDGKKIATYQER-D-PANLPWGSS---NVDIAIDSTGVFKELDTAQKHIDA 112 (332)
T ss_dssp HHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCS-S-GGGSCTTTT---TCSEEEECSSSSCSHHHHHHHHHT
T ss_pred HHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEEEEeec-c-cccCCcccc---CccEEEEecccccCHHHHHHHHHc
Confidence 4455555553 566664 2222 22223334444542 3 666789754 348999999999999999999999
Q ss_pred CcceEEEeeecCCe
Q psy6886 125 KLTGMAFRVPVANV 138 (146)
Q Consensus 125 k~~g~a~~VP~~~~ 138 (146)
+.+...++.|..++
T Consensus 113 GAkkViIsaps~d~ 126 (332)
T 3pym_A 113 GAKKVVITAPSSTA 126 (332)
T ss_dssp TCSEEEESSCCSSS
T ss_pred CCCEEEECCCCCCC
Confidence 99999999998764
No 48
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=94.92 E-value=0.0025 Score=53.68 Aligned_cols=84 Identities=14% Similarity=0.273 Sum_probs=57.1
Q ss_pred cccchhHHHHH--hhhcee----eeee-eeeeeeccCccccccCCCCCCCCcCcccccceeeecccCccceeeeeecCCC
Q psy6886 51 VSNSLLTLAKV--IHDNFE----IVEG-LMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALN 123 (146)
Q Consensus 51 ttnclaPl~kv--i~~~fg----I~~g-~mTtvha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~ 123 (146)
..+.++-|+|- .|++|. .+++ +...-+.++-.|+. | |...+|.+. .-.|+-+|||.+.+.++.-.||+
T Consensus 42 d~~~~a~l~~yDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~-d-p~~i~W~~~---gvDiVlesTG~f~s~e~a~~hl~ 116 (346)
T 3h9e_O 42 DPEYMVYMFKYDSTHGRYKGSVEFRNGQLVVDNHEISVYQCK-E-PKQIPWRAV---GSPYVVESTGVYLSIQAASDHIS 116 (346)
T ss_dssp CHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCS-S-GGGCCGGGG---TSCEEEECSSSCCSHHHHHHHHH
T ss_pred ChhHhcccccccCCCCCCCCcEEEcCCEEEECCEEEEEEecC-C-hhhCCcccc---cccEEEEeccccCCHHHHHHHHH
Confidence 34555556553 566664 2222 22223344445542 3 666789754 34899999999999999999999
Q ss_pred CCcceEEEeeecCCee
Q psy6886 124 GKLTGMAFRVPVANVS 139 (146)
Q Consensus 124 Gk~~g~a~~VP~~~~s 139 (146)
++.+...+..|.+++.
T Consensus 117 aGAkkVVIsaps~d~p 132 (346)
T 3h9e_O 117 AGAQRVVISAPSPDAP 132 (346)
T ss_dssp TTCSEEEESSCCSSSC
T ss_pred cCCCEEEECCCCCCCC
Confidence 9999999999987653
No 49
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=94.75 E-value=0.0083 Score=50.34 Aligned_cols=94 Identities=10% Similarity=0.035 Sum_probs=66.9
Q ss_pred CCCCccccchhHHHHHhhhceeee--eeeeeeeeccCcccccc-CCCCCCCCcCcccccceeeecccCccceeeeeecCC
Q psy6886 46 PSFVTVSNSLLTLAKVIHDNFEIV--EGLMTTVHATTATQKTV-DGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPAL 122 (146)
Q Consensus 46 ~s~~cttnclaPl~kvi~~~fgI~--~g~mTtvha~t~~Q~~~-D~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L 122 (146)
.++.|+++++...++-|+++++|+ +-.++|.++++...+.. +.. .+. ....|+.|...+..+.+..+..+|
T Consensus 153 ANPgC~~t~~~laL~PL~~~~~i~~~~iiv~t~sgvSGAG~~~~~~~---~~~---e~~~n~~~y~~~~h~h~pEi~~el 226 (351)
T 1vkn_A 153 GNPGCYPTSVILALAPALKHNLVDPETILVDAKSGVSGAGRKEKVDY---LFS---EVNESLRPYNVAKHRHVPEMEQEL 226 (351)
T ss_dssp ECCCHHHHHHHHHHHHHHHTTCSCCSEEEEEEEEEGGGGCSCCSGGG---BHH---HHTTCCEECSCSCCTHHHHHHHHH
T ss_pred eCCChHHHHHHHHHHHHHHcCCCCCCEEEEEEEeeccccCccccccc---chh---HHhcccccCCccccccHHHHHHHH
Confidence 467799999999999999999998 77899999998877631 111 111 234578887766444333333333
Q ss_pred C------CCcceEEEeeecCCeeEEEeEE
Q psy6886 123 N------GKLTGMAFRVPVANVSVVDLTV 145 (146)
Q Consensus 123 ~------Gk~~g~a~~VP~~~~s~~dlt~ 145 (146)
. .+++....|||+..+.+..+++
T Consensus 227 ~~i~~~~~~v~ftp~rvPv~rG~~~tv~v 255 (351)
T 1vkn_A 227 GKISGKKVNVVFTPHLVPMTRGILSTIYV 255 (351)
T ss_dssp HHHHTSCCEEEEEEEEESSSSCEEEEEEE
T ss_pred HHhhCCCCCEEEEEEEeccccEEEEEEEE
Confidence 2 4678899999999999888765
No 50
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=93.93 E-value=0.0066 Score=50.91 Aligned_cols=106 Identities=11% Similarity=0.191 Sum_probs=65.5
Q ss_pred EEEecCC--cchhhhhhhcccc-CCC-------CccccchhHHHHH--hhhcee----eeee-eeeeeeccCccccccCC
Q psy6886 26 VSMVSDV--LDVLYSELLLPRE-PSF-------VTVSNSLLTLAKV--IHDNFE----IVEG-LMTTVHATTATQKTVDG 88 (146)
Q Consensus 26 va~Ind~--~d~~y~~~~~~~~-~s~-------~cttnclaPl~kv--i~~~fg----I~~g-~mTtvha~t~~Q~~~D~ 88 (146)
|+ ||.. +.-..+..+|... +.. ....+.+|-|+|- .|++|. .+++ +.-.-+.++-.|+ .|
T Consensus 5 v~-INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e-~d- 81 (335)
T 3doc_A 5 VA-INGFGRIGRNILRAIVESGRTDIQVVAINDLGPVETNAHLLRYDSVHGRFPKEVEVAGDTIDVGYGPIKVHAV-RN- 81 (335)
T ss_dssp EE-EECCSHHHHHHHHHHHHTTCCSEEEEEEECSSCHHHHHHHHHEETTTEECSSCCEECSSEEESSSSEEEEECC-SS-
T ss_pred EE-EECCCcHHHHHHHHHHhccCCCeEEEEEeCCCCHHHHHHHhcccCCCCCCCCeEEEecCEEEECCEEEEEEee-cc-
Confidence 56 7776 5555555555421 110 1233445555542 566664 2222 2222233444444 23
Q ss_pred CCCCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeecCC
Q psy6886 89 PSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPVAN 137 (146)
Q Consensus 89 p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~~~ 137 (146)
|...+|.+. .-.|+-+|||.+.+.++.-.||+++.+...++.|..+
T Consensus 82 p~~i~w~~~---gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d 127 (335)
T 3doc_A 82 PAELPWKEE---NVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPADG 127 (335)
T ss_dssp TTSSCTTTT---TCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCTT
T ss_pred ccccccccc---CCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCCCC
Confidence 666789754 3489999999999999999999999999999999775
No 51
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=93.75 E-value=0.0078 Score=50.53 Aligned_cols=105 Identities=17% Similarity=0.232 Sum_probs=65.5
Q ss_pred EEEecCC--cchhhhhhhccccCCC------CccccchhHHHHH--hhhcee----eeee-eeeeeeccCccccccCCCC
Q psy6886 26 VSMVSDV--LDVLYSELLLPREPSF------VTVSNSLLTLAKV--IHDNFE----IVEG-LMTTVHATTATQKTVDGPS 90 (146)
Q Consensus 26 va~Ind~--~d~~y~~~~~~~~~s~------~cttnclaPl~kv--i~~~fg----I~~g-~mTtvha~t~~Q~~~D~p~ 90 (146)
|+ ||.. |.-..+..++...+-- ....+.+|-|+|- .|++|. .+++ +.-.-+.++-.|+ .| |.
T Consensus 7 v~-INGfGrIGr~v~R~~~~~~~~~ivaind~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~inGk~I~v~~e-~d-p~ 83 (338)
T 3lvf_P 7 VA-INGFGRIGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFSE-PD-AS 83 (338)
T ss_dssp EE-EECCSHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECC-SC-GG
T ss_pred EE-EECCCcHHHHHHHHHHHCCCceEEEEecCCCHHHHHHHhccCCCCCCcCCeEEEcCCEEEECCEEEEEEEe-cc-cc
Confidence 56 8876 5555555555521100 1233445555543 566664 2222 2222333444454 23 66
Q ss_pred CCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeecC
Q psy6886 91 GKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPVA 136 (146)
Q Consensus 91 ~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~~ 136 (146)
..+|.+. .-.|+-+|||.+.+.++.-.||+++.+...++.|..
T Consensus 84 ~i~w~~~---gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~ 126 (338)
T 3lvf_P 84 KLPWKDL---NIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPAT 126 (338)
T ss_dssp GSCTTTT---TCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCB
T ss_pred cCCcccc---CCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCCC
Confidence 6789754 348999999999999999999999999999999975
No 52
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=93.53 E-value=0.017 Score=45.85 Aligned_cols=30 Identities=20% Similarity=0.244 Sum_probs=26.1
Q ss_pred CcceeEeccCceeeeeeec---CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLNNLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~~~~~vva~Ind~ 32 (146)
|+||+|.|.||+|+.+.++ .++ ++|+ +-|.
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~~~-eLva-~~d~ 35 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEKGH-EIVG-VIEN 35 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEE-EECS
T ss_pred ceEEEEECcCHHHHHHHHHHHhCCC-EEEE-EEec
Confidence 6899999999999999987 677 9999 6554
No 53
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=93.27 E-value=0.0077 Score=50.71 Aligned_cols=105 Identities=18% Similarity=0.257 Sum_probs=66.5
Q ss_pred EEEecCC--cchhhhhhhccccCCCC------ccccchhHHHHH--hhhcee----eeee-eeeeeeccCccccccCCCC
Q psy6886 26 VSMVSDV--LDVLYSELLLPREPSFV------TVSNSLLTLAKV--IHDNFE----IVEG-LMTTVHATTATQKTVDGPS 90 (146)
Q Consensus 26 va~Ind~--~d~~y~~~~~~~~~s~~------cttnclaPl~kv--i~~~fg----I~~g-~mTtvha~t~~Q~~~D~p~ 90 (146)
|+ ||.. |.-..+..+|...+--. ...+.+|-|+|- .|++|. .+++ +.-.-+.++-.|+ .| |.
T Consensus 7 v~-INGfGrIGr~v~Ra~~~~~~~~ivaINd~~d~~~~a~llkyDS~hG~f~~~v~~~~~~l~inGk~I~v~~e-~d-p~ 83 (345)
T 4dib_A 7 VA-INGFGRIGRMVFRQAIKESAFEIVAINASYPSETLAHLIKYDTVHGKFDGTVEAFEDHLLVDGKMIRLLNN-RD-PK 83 (345)
T ss_dssp EE-EECCSHHHHHHHHHHTTCSSSEEEEEECSSCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEEEECC-SC-GG
T ss_pred EE-EECCCcHHHHHHHHHHhCCCceEEEEcCCCCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEEEeec-CC-hh
Confidence 57 8877 55555555565211001 233455555553 566664 2222 3222334444554 23 66
Q ss_pred CCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeecC
Q psy6886 91 GKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPVA 136 (146)
Q Consensus 91 ~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~~ 136 (146)
..+|.+. .-.|+-+|||.+.+.++.-.||+++.+...++.|..
T Consensus 84 ~i~w~~~---gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~ 126 (345)
T 4dib_A 84 ELPWTDL---GVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPGK 126 (345)
T ss_dssp GSCTTTT---TEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB
T ss_pred hCCcccc---CccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCCC
Confidence 6789754 348999999999999999999999999999999975
No 54
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=92.58 E-value=0.024 Score=46.32 Aligned_cols=31 Identities=19% Similarity=0.302 Sum_probs=27.4
Q ss_pred CcceeEec-cCceeeeeeec---CCCceEEEEecCC
Q psy6886 1 MSKIGING-FGRIGLNNLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ing-fgriGr~v~r~---~~~~~vva~Ind~ 32 (146)
|+||+|+| .||+||.+.|+ .+++++|+ +-|.
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg-~vd~ 55 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRRKDVELCA-VLVR 55 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTCSSEEEEE-EBCC
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCCEEEE-EEec
Confidence 57999999 99999999998 78999999 7554
No 55
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=92.42 E-value=0.027 Score=45.48 Aligned_cols=31 Identities=35% Similarity=0.447 Sum_probs=27.4
Q ss_pred CcceeEec-cCceeeeeeec---CCCceEEEEecCC
Q psy6886 1 MSKIGING-FGRIGLNNLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ing-fgriGr~v~r~---~~~~~vva~Ind~ 32 (146)
|+||+|.| .||+||.+.|+ .+++++|+ +-|.
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~-~~d~ 41 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVG-ALDR 41 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEE-EBCC
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEE-EEEe
Confidence 68999999 99999999997 78999999 6554
No 56
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=91.07 E-value=0.03 Score=46.90 Aligned_cols=19 Identities=26% Similarity=0.478 Sum_probs=17.9
Q ss_pred CcceeEec-cCceeeeeeec
Q psy6886 1 MSKIGING-FGRIGLNNLNS 19 (146)
Q Consensus 1 ~~kv~ing-fgriGr~v~r~ 19 (146)
|+||+||| ||++|+.++|+
T Consensus 1 m~kVaIvGAtG~vG~~llr~ 20 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQR 20 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHH
T ss_pred CcEEEEECCCCHHHHHHHHH
Confidence 88999999 99999999993
No 57
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=89.91 E-value=0.042 Score=45.28 Aligned_cols=18 Identities=22% Similarity=0.475 Sum_probs=16.8
Q ss_pred cceeEec-cCceeeeeeec
Q psy6886 2 SKIGING-FGRIGLNNLNS 19 (146)
Q Consensus 2 ~kv~ing-fgriGr~v~r~ 19 (146)
+||+||| ||+|||.++|.
T Consensus 1 mkVaI~GAtG~iG~~llr~ 19 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKV 19 (331)
T ss_dssp CCEEEETTTSHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHH
Confidence 4899999 99999999997
No 58
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=89.27 E-value=0.074 Score=43.13 Aligned_cols=31 Identities=26% Similarity=0.439 Sum_probs=26.6
Q ss_pred CcceeEeccCceeeeeeec---CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLNNLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~~~~~vva~Ind~ 32 (146)
++||+|.|+|++|+.+.++ .+++++|+ +-|+
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~~~~elva-v~d~ 36 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQPDMDLVG-IFSR 36 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEE-EEES
T ss_pred CCEEEEEeecHHHHHHHHHHhcCCCCEEEE-EEcC
Confidence 4789999999999988887 67899999 7665
No 59
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=88.51 E-value=0.11 Score=42.87 Aligned_cols=31 Identities=32% Similarity=0.523 Sum_probs=27.6
Q ss_pred CcceeEeccCceeeeeeec---C--------CCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLNNLNS---Q--------PCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~--------~~~~vva~Ind~ 32 (146)
|+||+|-|+|.+|+.+.+. . +++++++ |-|.
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lva-V~d~ 43 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTA-VADS 43 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEE-EECS
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEE-EEeC
Confidence 8999999999999998887 4 7899999 8765
No 60
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=88.14 E-value=0.12 Score=41.66 Aligned_cols=31 Identities=19% Similarity=0.336 Sum_probs=26.0
Q ss_pred CcceeEeccCceeeee-eec---CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLNN-LNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~v-~r~---~~~~~vva~Ind~ 32 (146)
|+|+||=|.|+||+.. .++ .+.+++|| |-|+
T Consensus 23 mirigiIG~G~ig~~~~~~~~~~~~~~~lva-v~d~ 57 (350)
T 4had_A 23 MLRFGIISTAKIGRDNVVPAIQDAENCVVTA-IASR 57 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCSSEEEEE-EECS
T ss_pred ccEEEEEcChHHHHHHHHHHHHhCCCeEEEE-EECC
Confidence 7899999999999753 444 78899999 8876
No 61
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=87.73 E-value=0.13 Score=41.45 Aligned_cols=31 Identities=23% Similarity=0.450 Sum_probs=26.4
Q ss_pred CcceeEeccCceeeeeeec---CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLNNLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~~~~~vva~Ind~ 32 (146)
++||+|-|+|+||+...++ .+++++++ +-|.
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~~~elva-v~d~ 42 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAPDFEIAG-IVRR 42 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEE-EECC
T ss_pred CCEEEEECChHHHHHHHHHHhcCCCCEEEE-EEcC
Confidence 3689999999999988777 68899999 7665
No 62
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=87.05 E-value=0.091 Score=43.78 Aligned_cols=30 Identities=27% Similarity=0.441 Sum_probs=26.3
Q ss_pred CcceeEec-cCceeeeeeec---CC-----CceEEEEecC
Q psy6886 1 MSKIGING-FGRIGLNNLNS---QP-----CLRLVSMVSD 31 (146)
Q Consensus 1 ~~kv~ing-fgriGr~v~r~---~~-----~~~vva~Ind 31 (146)
|.||+|+| +|++|+.++|. ++ .+++++ +++
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~-l~s 47 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGA-LTA 47 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEE-EEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEE-EEC
Confidence 57999999 99999999997 67 899999 764
No 63
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=83.98 E-value=0.29 Score=38.76 Aligned_cols=30 Identities=23% Similarity=0.437 Sum_probs=24.9
Q ss_pred cceeEecc-Cceeeeeeec---CCCceEEEEecCC
Q psy6886 2 SKIGINGF-GRIGLNNLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 2 ~kv~ingf-griGr~v~r~---~~~~~vva~Ind~ 32 (146)
+||+|.|. ||+|+.+.++ .++.++|+ +-|.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva-~~d~ 34 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSA-ELDA 34 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEE-EECT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEE-EEcc
Confidence 48999995 9999999887 67899998 6444
No 64
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=82.33 E-value=0.33 Score=39.21 Aligned_cols=31 Identities=26% Similarity=0.382 Sum_probs=25.9
Q ss_pred CcceeEeccCceee-eeeec---CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGL-NNLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr-~v~r~---~~~~~vva~Ind~ 32 (146)
++||||-|.|+||+ ..+++ .+++++|| |-|+
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~~~~~lva-v~d~ 59 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKNANFKLVA-TASR 59 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHCTTEEEEE-EECS
T ss_pred CceEEEEecCHHHHHHHHHHHHhCCCeEEEE-EEeC
Confidence 47899999999998 66776 67899999 8775
No 65
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=81.95 E-value=0.34 Score=38.63 Aligned_cols=31 Identities=26% Similarity=0.390 Sum_probs=26.7
Q ss_pred CcceeEeccCceeeeeeec---CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLNNLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~~~~~vva~Ind~ 32 (146)
|+||||-|+|+||+...++ .+.+++++ |-|.
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~~~~~~~~-v~d~ 34 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTSGEYQLVA-IYSR 34 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTSEEEEE-EECS
T ss_pred CeEEEEEeCCHHHHHHHHHHHhCCCeEEEE-EEeC
Confidence 7899999999999887776 67899998 7665
No 66
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=81.46 E-value=0.37 Score=38.79 Aligned_cols=31 Identities=35% Similarity=0.499 Sum_probs=26.7
Q ss_pred CcceeEeccCceeeeeeec---CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLNNLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~~~~~vva~Ind~ 32 (146)
|+||||-|.|+||+...++ .+.+++++ |-|+
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~~~~~l~a-v~d~ 35 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMIDDAILYA-ISDV 35 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGSTTEEEEE-EECS
T ss_pred eeEEEEEcCCHHHHHHHHHHHhCCCcEEEE-EECC
Confidence 5799999999999987776 57899999 8775
No 67
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=81.36 E-value=0.37 Score=38.50 Aligned_cols=31 Identities=35% Similarity=0.553 Sum_probs=26.8
Q ss_pred CcceeEeccCceeeeeeec---CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLNNLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~~~~~vva~Ind~ 32 (146)
|+||||-|.|+||+...++ .+.+++++ +-|+
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~a-v~d~ 36 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNADARLVA-VADA 36 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEE-EECS
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCCcEEEE-EECC
Confidence 5799999999999987776 67899999 8776
No 68
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=80.14 E-value=0.45 Score=38.47 Aligned_cols=31 Identities=26% Similarity=0.450 Sum_probs=25.6
Q ss_pred CcceeEeccCceee-eeeec---CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGL-NNLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr-~v~r~---~~~~~vva~Ind~ 32 (146)
|+||||=|+|+||+ ...++ .+.+++|+ |-|+
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~a-v~d~ 36 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMIRETLEVKT-IFDL 36 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTEEEEE-EECT
T ss_pred eeEEEEEccCHHHHHHHHHHHhhCCCeEEEE-EECC
Confidence 57999999999998 55554 67899999 8765
No 69
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=80.12 E-value=0.16 Score=40.60 Aligned_cols=29 Identities=21% Similarity=0.400 Sum_probs=24.8
Q ss_pred cceeEecc-Cceeeeeeec---CCCceEEEEecC
Q psy6886 2 SKIGINGF-GRIGLNNLNS---QPCLRLVSMVSD 31 (146)
Q Consensus 2 ~kv~ingf-griGr~v~r~---~~~~~vva~Ind 31 (146)
+||+|.|. ||+|+.+.++ .++.++|+ +-|
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva-~~d 38 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALALEGVQLGA-ALE 38 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHSTTEECCC-EEC
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEE-EEe
Confidence 68999998 9999999886 68899987 544
No 70
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=79.59 E-value=0.52 Score=38.17 Aligned_cols=31 Identities=19% Similarity=0.292 Sum_probs=26.6
Q ss_pred CcceeEeccCceeeeeeec---CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLNNLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~~~~~vva~Ind~ 32 (146)
|+||||-|+|+||+...++ .+.+++++ |-|+
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~-v~d~ 39 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLAPNATISG-VASR 39 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCTTEEEEE-EECS
T ss_pred ceEEEEECchHHHHHHHHHHhhCCCcEEEE-EEcC
Confidence 5799999999999987776 67899999 8775
No 71
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=79.05 E-value=0.47 Score=37.95 Aligned_cols=31 Identities=13% Similarity=0.151 Sum_probs=25.5
Q ss_pred CcceeEeccCceeeeeeec---CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLNNLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~~~~~vva~Ind~ 32 (146)
|+|+||-|.|+||+...++ .+.+++++ |-|+
T Consensus 5 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~a-v~d~ 38 (329)
T 3evn_A 5 KVRYGVVSTAKVAPRFIEGVRLAGNGEVVA-VSSR 38 (329)
T ss_dssp CEEEEEEBCCTTHHHHHHHHHHHCSEEEEE-EECS
T ss_pred ceEEEEEechHHHHHHHHHHHhCCCcEEEE-EEcC
Confidence 4689999999999877776 57889998 7664
No 72
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=78.96 E-value=0.49 Score=37.96 Aligned_cols=31 Identities=35% Similarity=0.537 Sum_probs=26.5
Q ss_pred CcceeEeccCceeeeeeec---CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLNNLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~~~~~vva~Ind~ 32 (146)
|+||||-|.|+||+...++ .+.+++++ +-|.
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~~~~l~a-v~d~ 37 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANPDLELVV-IADP 37 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEE-EECS
T ss_pred ceEEEEECCcHHHHHHHHHHHhCCCcEEEE-EECC
Confidence 4789999999999987776 67899999 8765
No 73
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=78.33 E-value=0.45 Score=36.38 Aligned_cols=30 Identities=23% Similarity=0.410 Sum_probs=24.8
Q ss_pred cceeEeccCceeeeeeec--CCCceEEEEecCC
Q psy6886 2 SKIGINGFGRIGLNNLNS--QPCLRLVSMVSDV 32 (146)
Q Consensus 2 ~kv~ingfgriGr~v~r~--~~~~~vva~Ind~ 32 (146)
+||||-|+|++|+...+. .+..++++ +-|.
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~-v~d~ 32 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAA-ILDV 32 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE-EECS
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEE-EEec
Confidence 489999999999988776 56788888 7665
No 74
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=77.91 E-value=0.59 Score=37.47 Aligned_cols=31 Identities=10% Similarity=0.057 Sum_probs=26.5
Q ss_pred CcceeEeccCceeeeeeec---CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLNNLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~~~~~vva~Ind~ 32 (146)
|+||||=|.|+||+...++ .+.+++++ |-|+
T Consensus 5 ~~~igiiG~G~~g~~~~~~l~~~~~~~l~a-v~d~ 38 (330)
T 3e9m_A 5 KIRYGIMSTAQIVPRFVAGLRESAQAEVRG-IASR 38 (330)
T ss_dssp CEEEEECSCCTTHHHHHHHHHHSSSEEEEE-EBCS
T ss_pred eEEEEEECchHHHHHHHHHHHhCCCcEEEE-EEeC
Confidence 3689999999999988777 58899999 8775
No 75
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=76.21 E-value=0.66 Score=37.74 Aligned_cols=30 Identities=23% Similarity=0.396 Sum_probs=25.4
Q ss_pred cceeEeccCceeeeeeec---CCCceEEEEecCC
Q psy6886 2 SKIGINGFGRIGLNNLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 2 ~kv~ingfgriGr~v~r~---~~~~~vva~Ind~ 32 (146)
+||||-|+|+||+...++ .+.+++++ |-|+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~a-v~d~ 38 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNLEVHG-VFDI 38 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEE-EECS
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEE-EEcC
Confidence 689999999999877776 67899999 8765
No 76
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=76.05 E-value=0.76 Score=37.04 Aligned_cols=31 Identities=26% Similarity=0.486 Sum_probs=26.3
Q ss_pred CcceeEeccCceeeeeeec---C-CCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLNNLNS---Q-PCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~-~~~~vva~Ind~ 32 (146)
|+||||=|.|+||+...++ . +.+++|+ +-|+
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lva-v~d~ 47 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELID-VCDI 47 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEE-EECS
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEE-EEcC
Confidence 4789999999999887776 5 7899999 8776
No 77
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=75.94 E-value=0.66 Score=40.01 Aligned_cols=31 Identities=19% Similarity=0.339 Sum_probs=27.1
Q ss_pred CcceeEeccCceeeeeeec---CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLNNLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~~~~~vva~Ind~ 32 (146)
++||||-|.|+||+...+. .+.+++++ |-|.
T Consensus 23 ~IRVGIIGaG~iG~~~~~~l~~~~~veLvA-V~D~ 56 (446)
T 3upl_A 23 PIRIGLIGAGEMGTDIVTQVARMQGIEVGA-LSAR 56 (446)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSSSEEEEE-EECS
T ss_pred ceEEEEECChHHHHHHHHHHhhCCCcEEEE-EEeC
Confidence 3799999999999988876 68899999 9876
No 78
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=75.51 E-value=0.41 Score=39.39 Aligned_cols=30 Identities=37% Similarity=0.523 Sum_probs=26.1
Q ss_pred cceeEeccCceeeeeeec---C------CCceEEEEecCC
Q psy6886 2 SKIGINGFGRIGLNNLNS---Q------PCLRLVSMVSDV 32 (146)
Q Consensus 2 ~kv~ingfgriGr~v~r~---~------~~~~vva~Ind~ 32 (146)
+||+|-|+|.+|+.+.|. . +++++|+ |-|.
T Consensus 5 irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lva-Vad~ 43 (325)
T 3ing_A 5 IRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVG-VSDS 43 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEE-EECS
T ss_pred EEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEE-EEec
Confidence 789999999999999887 3 6899999 8765
No 79
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=75.40 E-value=0.72 Score=37.24 Aligned_cols=31 Identities=29% Similarity=0.438 Sum_probs=25.0
Q ss_pred CcceeEeccCceeee-eeec---CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLN-NLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~-v~r~---~~~~~vva~Ind~ 32 (146)
++||||-|+|+||+. ..++ .+.+++|+ |-|+
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~a-v~d~ 41 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGTPGLELAG-VSSS 41 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEE-EECS
T ss_pred CceEEEECCCHHHHHHHHHHHhhCCCcEEEE-EECC
Confidence 368999999999985 5554 67899999 8775
No 80
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=75.27 E-value=0.74 Score=37.36 Aligned_cols=31 Identities=19% Similarity=0.224 Sum_probs=25.0
Q ss_pred CcceeEeccCceeee-eeec---CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLN-NLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~-v~r~---~~~~~vva~Ind~ 32 (146)
|+||||-|+|+||+. ..++ .+.+++++ |-|+
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~a-v~d~ 39 (358)
T 3gdo_A 5 TIKVGILGYGLSGSVFHGPLLDVLDEYQISK-IMTS 39 (358)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTEEEEE-EECS
T ss_pred cceEEEEccCHHHHHHHHHHHhhCCCeEEEE-EEcC
Confidence 369999999999985 4554 67899999 8776
No 81
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=74.84 E-value=0.75 Score=37.47 Aligned_cols=31 Identities=26% Similarity=0.386 Sum_probs=25.1
Q ss_pred CcceeEeccCceeee-eeec---CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLN-NLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~-v~r~---~~~~~vva~Ind~ 32 (146)
|+||||-|.|+||+. ..++ .+.+++|+ |-|+
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~a-v~d~ 41 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAF-VASR 41 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEE-EECS
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEE-EEcC
Confidence 478999999999985 5554 67899999 8776
No 82
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=74.58 E-value=0.79 Score=36.87 Aligned_cols=31 Identities=13% Similarity=0.228 Sum_probs=25.6
Q ss_pred CcceeEeccCceeee-eee-c---CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLN-NLN-S---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~-v~r-~---~~~~~vva~Ind~ 32 (146)
|+||||-|.|+||+. ..+ . .+.+++++ |-|+
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~a-v~d~ 37 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAH-IFRR 37 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEE-EECS
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCeEEEE-EEcC
Confidence 579999999999984 566 3 67899999 8776
No 83
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=74.41 E-value=0.76 Score=37.03 Aligned_cols=30 Identities=20% Similarity=0.261 Sum_probs=25.5
Q ss_pred cceeEeccCceeeeeeec---CCCceEEEEecCC
Q psy6886 2 SKIGINGFGRIGLNNLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 2 ~kv~ingfgriGr~v~r~---~~~~~vva~Ind~ 32 (146)
+||||-|.|+||+...++ .+.+++++ +-|+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lva-v~d~ 38 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVT-CYSR 38 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEE-EECS
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEE-EECC
Confidence 689999999999887776 56899999 8665
No 84
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=74.39 E-value=0.71 Score=37.46 Aligned_cols=31 Identities=23% Similarity=0.402 Sum_probs=25.4
Q ss_pred CcceeEeccCceeee-eeec---CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLN-NLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~-v~r~---~~~~~vva~Ind~ 32 (146)
|+||||=|+|+||+. ..++ .+.++++| |-|+
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~a-v~d~ 39 (362)
T 3fhl_A 5 IIKTGLAAFGMSGQVFHAPFISTNPHFELYK-IVER 39 (362)
T ss_dssp CEEEEESCCSHHHHHTTHHHHHHCTTEEEEE-EECS
T ss_pred ceEEEEECCCHHHHHHHHHHHhhCCCeEEEE-EEcC
Confidence 478999999999985 5554 67899999 8776
No 85
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=74.32 E-value=0.86 Score=35.92 Aligned_cols=31 Identities=23% Similarity=0.300 Sum_probs=25.6
Q ss_pred CcceeEeccCceeee-eeec---CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLN-NLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~-v~r~---~~~~~vva~Ind~ 32 (146)
|+|+||=|.|+||+. ..++ .+.+++++ |-|+
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~a-v~d~ 40 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVG-AFTP 40 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEE-EECS
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEE-EECC
Confidence 478999999999985 6665 57899999 8775
No 86
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=74.07 E-value=0.86 Score=36.10 Aligned_cols=31 Identities=23% Similarity=0.234 Sum_probs=24.9
Q ss_pred CcceeEeccCceeee-eeec---CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLN-NLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~-v~r~---~~~~~vva~Ind~ 32 (146)
|+||||-|+|+||+. ..++ .+.+++++ +-|.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~~~~~lva-v~d~ 39 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAASDWTLQG-AWSP 39 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSCSSEEEEE-EECS
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCeEEEE-EECC
Confidence 468999999999985 6665 57799998 7665
No 87
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=74.07 E-value=0.87 Score=36.09 Aligned_cols=31 Identities=26% Similarity=0.428 Sum_probs=25.9
Q ss_pred CcceeEeccCceeeeeeec---CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLNNLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~~~~~vva~Ind~ 32 (146)
++||||-|+|++|+...++ .+.+++|+ +-|+
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~~~~~~v~-v~d~ 43 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGLPGAALVR-LASS 43 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHCTTEEEEE-EEES
T ss_pred cceEEEECCcHHHHHHHHHHHhCCCcEEEE-EEeC
Confidence 4689999999999887776 57899998 7665
No 88
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=73.96 E-value=0.85 Score=36.50 Aligned_cols=30 Identities=27% Similarity=0.346 Sum_probs=23.0
Q ss_pred cceeEeccCceeeeeeec----------CCCceEEEEecCC
Q psy6886 2 SKIGINGFGRIGLNNLNS----------QPCLRLVSMVSDV 32 (146)
Q Consensus 2 ~kv~ingfgriGr~v~r~----------~~~~~vva~Ind~ 32 (146)
+||||=|.|+||+.-.++ .+.+++|| |-|+
T Consensus 26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lva-v~d~ 65 (393)
T 4fb5_A 26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVH-LAEA 65 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEE-EECC
T ss_pred ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEE-EECC
Confidence 689999999999854443 35678888 8775
No 89
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=73.92 E-value=1.1 Score=35.90 Aligned_cols=31 Identities=13% Similarity=-0.016 Sum_probs=26.9
Q ss_pred CcceeEeccCceeeeeeec-CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLNNLNS-QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~-~~~~~vva~Ind~ 32 (146)
|+|+||=|.|.+|+..+++ .+.+++|| |-|+
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l~~~~~lva-v~d~ 33 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGLDEECSITG-IAPG 33 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTCCTTEEEEE-EECS
T ss_pred ceEEEEEccchhHHHHHHhcCCCcEEEE-EecC
Confidence 6899999999999877777 78899999 8776
No 90
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=73.22 E-value=0.86 Score=36.40 Aligned_cols=31 Identities=23% Similarity=0.231 Sum_probs=25.1
Q ss_pred CcceeEeccCceeeeeeec---CC--CceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLNNLNS---QP--CLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~~--~~~vva~Ind~ 32 (146)
|+|+||-|.|+||+...++ .+ ++++|+ |-|+
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~a-v~d~ 37 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTLPRSEHQVVA-VAAR 37 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEE-EECS
T ss_pred ccEEEEECchHHHHHHHHHHHhCCCCCeEEEE-EEcC
Confidence 5799999999999987766 33 478999 8775
No 91
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=72.08 E-value=0.35 Score=40.47 Aligned_cols=108 Identities=14% Similarity=0.260 Sum_probs=67.1
Q ss_pred EEEecCC--cchhhhhhhccccCCCC-------ccccchhHHHHH--hhhceee-----eee--eeeeeeccCccccccC
Q psy6886 26 VSMVSDV--LDVLYSELLLPREPSFV-------TVSNSLLTLAKV--IHDNFEI-----VEG--LMTTVHATTATQKTVD 87 (146)
Q Consensus 26 va~Ind~--~d~~y~~~~~~~~~s~~-------cttnclaPl~kv--i~~~fgI-----~~g--~mTtvha~t~~Q~~~D 87 (146)
|+ ||.. |.-..+..++...+--. ...+.+|-|+|- .|++|.- +++ +.-.-+.++-.|+ .|
T Consensus 6 v~-INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~~v~~~~~~~l~i~Gk~I~v~~e-~d 83 (337)
T 3v1y_O 6 IG-INGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGI-RN 83 (337)
T ss_dssp EE-EECCSHHHHHHHHHHHTCSSEEEEEEECTTSCHHHHHHHHHCCTTTCCCCSSCEEEEETTEEEETTEEEEEECC-SS
T ss_pred EE-EECCChHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhhhccCCCcccCceEEEcCCcEEEECCEEEEEEEe-cC
Confidence 56 8876 55555555555211000 233455555543 5666642 222 3222334444444 23
Q ss_pred CCCCCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeecCCee
Q psy6886 88 GPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPVANVS 139 (146)
Q Consensus 88 ~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~~~~s 139 (146)
|...+|.+. .-.|+-+|||.+.+.++.-.||+++.+...++.|..++.
T Consensus 84 -p~~i~w~~~---gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p 131 (337)
T 3v1y_O 84 -PDEIPWAEA---GAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAP 131 (337)
T ss_dssp -GGGCCHHHH---TCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCCSSSC
T ss_pred -cccCCcccc---CCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCC
Confidence 666688643 348999999999999999999999999999999987653
No 92
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=71.79 E-value=0.97 Score=37.87 Aligned_cols=31 Identities=16% Similarity=0.293 Sum_probs=26.4
Q ss_pred CcceeEeccCceeeeeeec---CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLNNLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~~~~~vva~Ind~ 32 (146)
++||||=|.|+||+...++ .+.+++|+ |-|+
T Consensus 20 ~~rvgiIG~G~~g~~h~~~l~~~~~~~lva-v~d~ 53 (444)
T 2ixa_A 20 KVRIAFIAVGLRGQTHVENMARRDDVEIVA-FADP 53 (444)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEE-EECS
T ss_pred CceEEEEecCHHHHHHHHHHHhCCCcEEEE-EEeC
Confidence 4789999999999887776 57899999 8775
No 93
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=71.42 E-value=0.89 Score=36.83 Aligned_cols=31 Identities=16% Similarity=0.378 Sum_probs=25.0
Q ss_pred CcceeEeccCceee-eeeec---CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGL-NNLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr-~v~r~---~~~~~vva~Ind~ 32 (146)
++||||-|.|+||+ ...++ .+.+++++ |-|+
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~a-v~d~ 61 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEPLTEVTA-IASR 61 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCTTEEEEE-EEES
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCCCeEEEE-EEcC
Confidence 46899999999998 56665 67899998 7664
No 94
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=70.47 E-value=1.1 Score=37.60 Aligned_cols=31 Identities=19% Similarity=0.193 Sum_probs=25.4
Q ss_pred CcceeEeccCceee-eeeec---CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGL-NNLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr-~v~r~---~~~~~vva~Ind~ 32 (146)
++||||-|+|+||+ ...++ .+.+++|+ |-|+
T Consensus 83 ~irigiIG~G~~g~~~~~~~l~~~~~~~lva-v~d~ 117 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGFAGCQHSRIEA-LVSG 117 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHTTTCSSEEEEE-EECS
T ss_pred ceEEEEECCcHHHHHHHHHHHhhCCCcEEEE-EEcC
Confidence 47899999999997 66665 56799999 8775
No 95
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=70.24 E-value=0.73 Score=38.26 Aligned_cols=31 Identities=19% Similarity=0.367 Sum_probs=25.7
Q ss_pred CcceeEeccCceeeeeeec---CC---CceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLNNLNS---QP---CLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~~---~~~vva~Ind~ 32 (146)
++||||-|+|.||+.+.+. .+ ++++++ |-|.
T Consensus 4 ~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vva-V~d~ 40 (358)
T 1ebf_A 4 VVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVL-LAEA 40 (358)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEE-EECS
T ss_pred eEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEE-EEEC
Confidence 4789999999999998887 33 689999 8764
No 96
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=70.12 E-value=1.1 Score=35.93 Aligned_cols=31 Identities=35% Similarity=0.579 Sum_probs=25.8
Q ss_pred CcceeEeccCceeeeeeec----CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLNNLNS----QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~----~~~~~vva~Ind~ 32 (146)
|+||||-|.|+||+...++ .+.+++++ +-|+
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~~~~~~l~a-v~d~ 36 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNKLSGAEIVA-VTDV 36 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCSSEEEEE-EECS
T ss_pred eEEEEEECccHHHHHHHHHHHhhCCCcEEEE-EEcC
Confidence 4799999999999877765 47899999 8765
No 97
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=68.93 E-value=1.4 Score=35.09 Aligned_cols=31 Identities=23% Similarity=0.395 Sum_probs=25.0
Q ss_pred CcceeEeccCceeeeeeec----CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLNNLNS----QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~----~~~~~vva~Ind~ 32 (146)
|+||+|-|+|+||+...++ .+.+++|+ +-|+
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~va-v~d~ 42 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVA-ACAL 42 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEE-EECS
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEE-EecC
Confidence 4789999999999876654 46789999 8765
No 98
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=68.35 E-value=1.4 Score=35.26 Aligned_cols=31 Identities=26% Similarity=0.389 Sum_probs=26.2
Q ss_pred CcceeEecc-Cceeeeeeec--CCCceEEEEecCC
Q psy6886 1 MSKIGINGF-GRIGLNNLNS--QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingf-griGr~v~r~--~~~~~vva~Ind~ 32 (146)
|+|+||-|. |+||+..+++ ....++|| +-|+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lva-v~d~ 36 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVA-SLDP 36 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTTCEEEE-EECS
T ss_pred ceEEEEECCChHHHHHHHHHHHhCCCEEEE-EEcC
Confidence 789999999 7899888777 34689999 8886
No 99
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=67.67 E-value=1.4 Score=35.78 Aligned_cols=30 Identities=30% Similarity=0.399 Sum_probs=24.5
Q ss_pred cceeEeccCceeee-eeec---CCCceEEEEecCC
Q psy6886 2 SKIGINGFGRIGLN-NLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 2 ~kv~ingfgriGr~-v~r~---~~~~~vva~Ind~ 32 (146)
+||||-|.|+||+. ..++ .+.+++++ |-|+
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~a-v~d~ 39 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQMQDIRIVA-ACDS 39 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTCTTEEEEE-EECS
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCcEEEE-EEcC
Confidence 68999999999984 5665 67899999 8665
No 100
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=67.13 E-value=0.62 Score=38.11 Aligned_cols=30 Identities=33% Similarity=0.470 Sum_probs=25.1
Q ss_pred cceeEeccCceeeeeeec---CC-------CceEEEEecCC
Q psy6886 2 SKIGINGFGRIGLNNLNS---QP-------CLRLVSMVSDV 32 (146)
Q Consensus 2 ~kv~ingfgriGr~v~r~---~~-------~~~vva~Ind~ 32 (146)
+||||=|+|.||+.+.+. .+ ++++++ |-|.
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vva-V~d~ 46 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVF-VADS 46 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEE-EECS
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEE-EEEC
Confidence 789999999999998877 33 589999 8664
No 101
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=66.55 E-value=1.6 Score=35.02 Aligned_cols=31 Identities=26% Similarity=0.357 Sum_probs=26.3
Q ss_pred CcceeEecc-Cceeeeeeec--CCCceEEEEecCC
Q psy6886 1 MSKIGINGF-GRIGLNNLNS--QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingf-griGr~v~r~--~~~~~vva~Ind~ 32 (146)
|+|+||-|. |+||+...++ ....++|| +-|+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lva-v~d~ 36 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGNCLVS-AYDI 36 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTCEEEE-EECS
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCCEEEE-EEcC
Confidence 789999999 7999888877 34689999 8876
No 102
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=66.32 E-value=1.5 Score=35.57 Aligned_cols=31 Identities=35% Similarity=0.574 Sum_probs=25.7
Q ss_pred CcceeEeccCceeeeeeec----CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLNNLNS----QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~----~~~~~vva~Ind~ 32 (146)
++||||=|.|+||+...++ .+.+++++ |-|+
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~~~lva-v~d~ 57 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSGVEVVA-VCDI 57 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTTEEEEE-EECS
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCCcEEEE-EEeC
Confidence 4689999999999877765 47899999 8775
No 103
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=66.12 E-value=1.6 Score=35.73 Aligned_cols=31 Identities=23% Similarity=0.342 Sum_probs=26.1
Q ss_pred CcceeEeccC-ceeeeeeec---CCCceEEEEecCC
Q psy6886 1 MSKIGINGFG-RIGLNNLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfg-riGr~v~r~---~~~~~vva~Ind~ 32 (146)
++||||-|+| ++|+...++ .+.+++|+ |-|+
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~l~a-v~d~ 36 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPDAQIVA-ACDP 36 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTTEEEEE-EECS
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEE-EEeC
Confidence 5799999999 999877766 67899999 8776
No 104
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=66.10 E-value=1.3 Score=37.76 Aligned_cols=29 Identities=31% Similarity=0.508 Sum_probs=24.9
Q ss_pred ceeEeccCceeeeeeec--C-CCceEEEEecCC
Q psy6886 3 KIGINGFGRIGLNNLNS--Q-PCLRLVSMVSDV 32 (146)
Q Consensus 3 kv~ingfgriGr~v~r~--~-~~~~vva~Ind~ 32 (146)
+|+|-|||+||+.+.|. . -..+|++ ++|+
T Consensus 214 tvgI~G~G~VG~~vA~~l~~~~G~kVv~-~sD~ 245 (419)
T 1gtm_A 214 TIAIQGYGNAGYYLAKIMSEDFGMKVVA-VSDS 245 (419)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEE-EECS
T ss_pred EEEEEcCCHHHHHHHHHHHHhcCCEEEE-EeCC
Confidence 68999999999988876 4 5689999 9887
No 105
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=65.92 E-value=0.93 Score=37.35 Aligned_cols=30 Identities=27% Similarity=0.267 Sum_probs=25.0
Q ss_pred cceeEeccCceeeeeeec---CC--------CceEEEEecCC
Q psy6886 2 SKIGINGFGRIGLNNLNS---QP--------CLRLVSMVSDV 32 (146)
Q Consensus 2 ~kv~ingfgriGr~v~r~---~~--------~~~vva~Ind~ 32 (146)
+||||-|+|.||+.+.+. .+ ++++++ |-|.
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lva-V~d~ 44 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLG-VLVR 44 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEE-EECS
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEE-EEEC
Confidence 789999999999998886 44 688998 8664
No 106
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=65.88 E-value=1.6 Score=35.11 Aligned_cols=31 Identities=19% Similarity=0.279 Sum_probs=26.1
Q ss_pred CcceeEeccC-ceeeeeeec---C-CCceEEEEecCC
Q psy6886 1 MSKIGINGFG-RIGLNNLNS---Q-PCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfg-riGr~v~r~---~-~~~~vva~Ind~ 32 (146)
++||||-|.| .+|+...++ . +.+++|+ |-|+
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lva-v~d~ 53 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITA-VTSR 53 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEE-EECS
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEE-EEcC
Confidence 4789999999 899887776 4 7899999 8776
No 107
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=65.17 E-value=1 Score=37.98 Aligned_cols=56 Identities=16% Similarity=0.240 Sum_probs=43.1
Q ss_pred eccCccccccCCCCCCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeecC
Q psy6886 77 HATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPVA 136 (146)
Q Consensus 77 ha~t~~Q~~~D~p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~~ 136 (146)
+.++-.|.-.| |...+|.+. .-.|+-+|||.+.+.++.-.||+++.+...++.|..
T Consensus 83 k~I~v~~~e~d-p~~i~w~~~---gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps~ 138 (359)
T 3ids_C 83 HRILCVKAQRN-PADLPWGKL---GVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPAS 138 (359)
T ss_dssp EEEEECCCCSS-TTTSCHHHH---TCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCCB
T ss_pred EEEEEEEccCC-cccCCcccc---CccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCC
Confidence 34444551124 666788643 348999999999999999999999999999999876
No 108
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=63.17 E-value=1.5 Score=36.11 Aligned_cols=30 Identities=23% Similarity=0.361 Sum_probs=22.5
Q ss_pred cceeEeccCceeeeeeec-----------CCCceEEEEecCC
Q psy6886 2 SKIGINGFGRIGLNNLNS-----------QPCLRLVSMVSDV 32 (146)
Q Consensus 2 ~kv~ingfgriGr~v~r~-----------~~~~~vva~Ind~ 32 (146)
+||||-|.|+||+.-.++ .+.+++|| |-|+
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elva-v~d~ 67 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYA-LADQ 67 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEE-EECS
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEE-EEcC
Confidence 689999999999865554 13567888 7665
No 109
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=63.13 E-value=0.61 Score=39.04 Aligned_cols=46 Identities=17% Similarity=0.273 Sum_probs=37.1
Q ss_pred CCCCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeecCC
Q psy6886 89 PSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPVAN 137 (146)
Q Consensus 89 p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~~~ 137 (146)
|...+|.+. ...|+-++||.+.+.++.-.+++++.+...++.|..+
T Consensus 90 p~~~~w~~~---gvDiV~estG~f~s~e~a~~hl~aGakkVVIsaps~~ 135 (345)
T 2b4r_O 90 PSQIPWGKC---QVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKD 135 (345)
T ss_dssp GGGCCHHHH---TCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSS
T ss_pred cccCccccc---CCCEEEECcCccccHhhHHHHHHCCCCEEEECCCCCC
Confidence 545578632 2389999999999999999999999888899988764
No 110
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=63.08 E-value=1.9 Score=34.14 Aligned_cols=31 Identities=23% Similarity=0.310 Sum_probs=24.5
Q ss_pred CcceeEeccCceeeeeeec------CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLNNLNS------QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~------~~~~~vva~Ind~ 32 (146)
|+||||=|+|.||+...++ .+.+++++ +-|.
T Consensus 7 ~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lva-v~d~ 43 (294)
T 1lc0_A 7 KFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIG-FVSR 43 (294)
T ss_dssp SEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEE-EECS
T ss_pred cceEEEEEEcHHHHHHHHHHhccccCCCEEEEE-EECc
Confidence 5799999999999876655 25788998 7665
No 111
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=62.91 E-value=1.9 Score=35.01 Aligned_cols=30 Identities=23% Similarity=0.365 Sum_probs=25.4
Q ss_pred cceeEeccCceeeeeeec----CCCceEEEEecCC
Q psy6886 2 SKIGINGFGRIGLNNLNS----QPCLRLVSMVSDV 32 (146)
Q Consensus 2 ~kv~ingfgriGr~v~r~----~~~~~vva~Ind~ 32 (146)
+||+|-|.|.||+...|. .+.+++++ +-|.
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elva-v~d~ 38 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGA-MVGI 38 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEE-EECS
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEE-EEeC
Confidence 789999999999888775 57799998 7665
No 112
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=60.59 E-value=0.66 Score=38.61 Aligned_cols=45 Identities=16% Similarity=0.231 Sum_probs=37.3
Q ss_pred CCCCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeecC
Q psy6886 89 PSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPVA 136 (146)
Q Consensus 89 p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~~ 136 (146)
|...+|.+. .-.|+-++||.+.+.++.-.|++++.+...++.|..
T Consensus 82 p~~~~w~~~---gvDiV~estG~f~s~e~a~~h~~aGakkVviSaps~ 126 (335)
T 1obf_O 82 PAQLPWGAL---KVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGG 126 (335)
T ss_dssp GGGSCTTTT---TCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCC
T ss_pred cccCCcccc---CCCEEEEccCccccHHHHHHHHHcCCCEEEECCccc
Confidence 555678643 238999999999999999999999888899998875
No 113
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=59.95 E-value=2.9 Score=35.02 Aligned_cols=30 Identities=10% Similarity=0.223 Sum_probs=25.9
Q ss_pred cceeEecc----Cceeeeeeec---C-CCceEEEEecCC
Q psy6886 2 SKIGINGF----GRIGLNNLNS---Q-PCLRLVSMVSDV 32 (146)
Q Consensus 2 ~kv~ingf----griGr~v~r~---~-~~~~vva~Ind~ 32 (146)
+||||-|+ |++|+...++ . +.+++|+ |-|+
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lva-v~d~ 58 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITA-LYSP 58 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEE-EECS
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEE-EEeC
Confidence 68999999 8999887777 5 7899999 8776
No 114
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=55.44 E-value=2.4 Score=34.75 Aligned_cols=25 Identities=24% Similarity=0.401 Sum_probs=20.0
Q ss_pred ceeEeccCceeeeeeec--CCCceEEE
Q psy6886 3 KIGINGFGRIGLNNLNS--QPCLRLVS 27 (146)
Q Consensus 3 kv~ingfgriGr~v~r~--~~~~~vva 27 (146)
++||-|||+||+.+.|. .-..+|++
T Consensus 143 tvGIiG~G~IG~~va~~~~~fg~~v~~ 169 (334)
T 3kb6_A 143 TLGVIGTGRIGSRVAMYGLAFGMKVLC 169 (334)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEECcchHHHHHHHhhcccCceeee
Confidence 58999999999999886 23367776
No 115
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=52.61 E-value=3.1 Score=32.76 Aligned_cols=30 Identities=17% Similarity=0.211 Sum_probs=24.3
Q ss_pred cceeEeccCceeeee-eec--CCCceEEEEecCC
Q psy6886 2 SKIGINGFGRIGLNN-LNS--QPCLRLVSMVSDV 32 (146)
Q Consensus 2 ~kv~ingfgriGr~v-~r~--~~~~~vva~Ind~ 32 (146)
+||||-|.|++|+.. .++ .+.+++++ |-|+
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~va-v~d~ 33 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGGEVVS-MMST 33 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTCEEEE-EECS
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCCeEEE-EECC
Confidence 589999999999876 555 46789998 8665
No 116
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=51.33 E-value=4.1 Score=32.36 Aligned_cols=31 Identities=10% Similarity=0.113 Sum_probs=22.8
Q ss_pred CcceeEeccCceee-eeeec--CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGL-NNLNS--QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr-~v~r~--~~~~~vva~Ind~ 32 (146)
++||||=|+|++|. ...++ .+.+++|+ |-|+
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~~~~~lva-v~d~ 37 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLIDAGAELAG-VFES 37 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHHTTCEEEE-EECS
T ss_pred ccEEEEECCChHHHHHhhhhhcCCCcEEEE-EeCC
Confidence 47999999999985 23333 46788888 7665
No 117
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=50.31 E-value=4.3 Score=34.06 Aligned_cols=105 Identities=12% Similarity=0.233 Sum_probs=64.5
Q ss_pred EEEecCC--cchhhhhhhccccCCCC------ccccchhHHH--HHhhhcee--e--ee-eeeeeeeccCccccccCCCC
Q psy6886 26 VSMVSDV--LDVLYSELLLPREPSFV------TVSNSLLTLA--KVIHDNFE--I--VE-GLMTTVHATTATQKTVDGPS 90 (146)
Q Consensus 26 va~Ind~--~d~~y~~~~~~~~~s~~------cttnclaPl~--kvi~~~fg--I--~~-g~mTtvha~t~~Q~~~D~p~ 90 (146)
|| ||.. +.-..+..+++. +-.. ...+.+|-|+ .-.|++|. + ++ .+...-+.++..|. .| |.
T Consensus 24 Va-InGfGrIGr~vlr~l~e~-~~~ivaIndl~d~~~~a~llkydS~hG~f~~~v~~~~~~l~i~Gk~I~v~~~-~d-p~ 99 (356)
T 3hja_A 24 LA-INGFGRIGRNVFKIAFER-GIDIVAINDLTDPKTLAHLLKYDSTFGVYNKKVESRDGAIVVDGREIKIIAE-RD-PK 99 (356)
T ss_dssp EE-EECCSHHHHHHHHHHHHT-TCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECC-SS-GG
T ss_pred EE-EECCCHHHHHHHHHHHHC-CCCEEEEeCCCCHHHhhhhhccccCCCCCCCCEEEcCCEEEECCEEEEEEEc-CC-hh
Confidence 68 8887 555555555552 1111 1233344455 34566664 1 11 12222233444443 13 55
Q ss_pred CCCCcCcccccceeeecccCccce----eeeeecCCC-CCcceEEEeeecCC
Q psy6886 91 GKLWRDGRGAAQNIIPAATGAAKA----VGKVIPALN-GKLTGMAFRVPVAN 137 (146)
Q Consensus 91 ~~~~r~~r~a~~niIP~sTgaaka----v~kviP~L~-Gk~~g~a~~VP~~~ 137 (146)
..+|.+. .-.|+-+|||.+.+ .++.-.||+ ++.+...+..|..+
T Consensus 100 ~i~w~~~---gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps~d 148 (356)
T 3hja_A 100 NLPWAKL---GIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKD 148 (356)
T ss_dssp GCCHHHH---TCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCCSS
T ss_pred hCCcccc---CCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCCCC
Confidence 5678643 34899999999999 999999999 99999999999765
No 118
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=50.18 E-value=4.2 Score=34.63 Aligned_cols=31 Identities=10% Similarity=0.273 Sum_probs=25.9
Q ss_pred CcceeEecc----Cceeeeeeec---C-CCceEEEEecCC
Q psy6886 1 MSKIGINGF----GRIGLNNLNS---Q-PCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingf----griGr~v~r~---~-~~~~vva~Ind~ 32 (146)
++||||=|+ |.+|+...++ . +.+++|| |-|+
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lva-v~d~ 77 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVA-LYNP 77 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEE-EECS
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEE-EEeC
Confidence 478999999 8999877776 5 7899999 8775
No 119
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=48.91 E-value=3.5 Score=33.52 Aligned_cols=27 Identities=22% Similarity=0.388 Sum_probs=20.9
Q ss_pred ceeEeccCceeeeeeec--CCCceEEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS--QPCLRLVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~--~~~~~vva~In 30 (146)
+|||-|+|+||+.+.|. .-..+|++ .+
T Consensus 148 ~vgIiG~G~IG~~~A~~l~~~G~~V~~-~d 176 (331)
T 1xdw_A 148 TVGVVGLGRIGRVAAQIFHGMGATVIG-ED 176 (331)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEE-EC
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEE-EC
Confidence 69999999999998877 22367776 54
No 120
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=48.32 E-value=5.1 Score=32.82 Aligned_cols=31 Identities=23% Similarity=0.253 Sum_probs=24.5
Q ss_pred cceeEeccCc---eeeeeeec---CCCceEEEEecCC
Q psy6886 2 SKIGINGFGR---IGLNNLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 2 ~kv~ingfgr---iGr~v~r~---~~~~~vva~Ind~ 32 (146)
+||||-|.|+ ||+...++ .+.+++|+.|-|+
T Consensus 13 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~ 49 (398)
T 3dty_A 13 IRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDI 49 (398)
T ss_dssp EEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCS
T ss_pred ceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCC
Confidence 6899999999 99876665 6779998745554
No 121
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=48.06 E-value=4.3 Score=33.47 Aligned_cols=27 Identities=30% Similarity=0.388 Sum_probs=21.1
Q ss_pred ceeEeccCceeeeeeec--CCCceEEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS--QPCLRLVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~--~~~~~vva~In 30 (146)
++||=|||+||+.+.|. .-..+|++ .+
T Consensus 175 tvGIIGlG~IG~~vA~~l~~~G~~V~~-~d 203 (345)
T 4g2n_A 175 RLGIFGMGRIGRAIATRARGFGLAIHY-HN 203 (345)
T ss_dssp EEEEESCSHHHHHHHHHHHTTTCEEEE-EC
T ss_pred EEEEEEeChhHHHHHHHHHHCCCEEEE-EC
Confidence 69999999999998887 22367777 54
No 122
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=47.90 E-value=5.1 Score=32.47 Aligned_cols=30 Identities=13% Similarity=0.235 Sum_probs=22.0
Q ss_pred cceeEeccCceeee-eeec--CCCceEEEEecCC
Q psy6886 2 SKIGINGFGRIGLN-NLNS--QPCLRLVSMVSDV 32 (146)
Q Consensus 2 ~kv~ingfgriGr~-v~r~--~~~~~vva~Ind~ 32 (146)
+||||=|.|++|.. ..++ .+.+++|| |-|+
T Consensus 27 irvgiiG~G~~~~~~~~~~~~~~~~~lva-v~d~ 59 (361)
T 3u3x_A 27 LRFAAVGLNHNHIYGQVNCLLRAGARLAG-FHEK 59 (361)
T ss_dssp CEEEEECCCSTTHHHHHHHHHHTTCEEEE-EECS
T ss_pred cEEEEECcCHHHHHHHHHHhhcCCcEEEE-EEcC
Confidence 78999999998853 2333 57788888 7665
No 123
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=47.80 E-value=4.4 Score=33.02 Aligned_cols=27 Identities=26% Similarity=0.302 Sum_probs=20.9
Q ss_pred ceeEeccCceeeeeeec--CCCceEEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS--QPCLRLVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~--~~~~~vva~In 30 (146)
+|||=|+|+||+.+.|. .-..+|++ .+
T Consensus 147 tvGIIG~G~IG~~vA~~l~~~G~~V~~-~d 175 (330)
T 4e5n_A 147 TVGFLGMGAIGLAMADRLQGWGATLQY-HE 175 (330)
T ss_dssp EEEEECCSHHHHHHHHHTTTSCCEEEE-EC
T ss_pred EEEEEeeCHHHHHHHHHHHHCCCEEEE-EC
Confidence 79999999999998876 22367777 53
No 124
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=47.79 E-value=3.4 Score=34.95 Aligned_cols=28 Identities=18% Similarity=0.346 Sum_probs=23.4
Q ss_pred CcceeEecc-Cceeeeeeec---CCC-ceEEEEe
Q psy6886 1 MSKIGINGF-GRIGLNNLNS---QPC-LRLVSMV 29 (146)
Q Consensus 1 ~~kv~ingf-griGr~v~r~---~~~-~~vva~I 29 (146)
|.||+|=|+ |.||+.+++. +++ +++++ +
T Consensus 4 m~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~a-l 36 (388)
T 1r0k_A 4 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIA-L 36 (388)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEE-E
T ss_pred ceEEEEECCCeEeHHHHHHHHHhCcCcEEEEE-E
Confidence 578999999 9999998876 554 88887 5
No 125
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=47.20 E-value=4.6 Score=33.08 Aligned_cols=27 Identities=26% Similarity=0.471 Sum_probs=21.2
Q ss_pred ceeEeccCceeeeeeec--CCCceEEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS--QPCLRLVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~--~~~~~vva~In 30 (146)
+|||=|+|+||+.+.|. .-..+|++ .+
T Consensus 167 tvgIIGlG~IG~~vA~~l~~~G~~V~~-~d 195 (335)
T 2g76_A 167 TLGILGLGRIGREVATRMQSFGMKTIG-YD 195 (335)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEE-EC
T ss_pred EEEEEeECHHHHHHHHHHHHCCCEEEE-EC
Confidence 69999999999998876 22367777 54
No 126
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=47.05 E-value=1.5 Score=34.91 Aligned_cols=30 Identities=20% Similarity=0.326 Sum_probs=22.4
Q ss_pred cceeEeccCceeeeeeec---CC-------CceEEEEecCC
Q psy6886 2 SKIGINGFGRIGLNNLNS---QP-------CLRLVSMVSDV 32 (146)
Q Consensus 2 ~kv~ingfgriGr~v~r~---~~-------~~~vva~Ind~ 32 (146)
+||||=|.|+||+.-.++ .+ ..+++| |-|+
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~a-v~d~ 46 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNV-LCGR 46 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEE-EECS
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEE-EEcC
Confidence 589999999999865554 22 348888 8775
No 127
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=46.98 E-value=3.9 Score=33.30 Aligned_cols=27 Identities=19% Similarity=0.377 Sum_probs=20.9
Q ss_pred ceeEeccCceeeeeeec--CCCceEEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS--QPCLRLVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~--~~~~~vva~In 30 (146)
+|||=|+|+||+.+.|. .-..+|++ .+
T Consensus 147 ~vgIiG~G~IG~~~A~~l~~~G~~V~~-~d 175 (333)
T 1dxy_A 147 TVGVMGTGHIGQVAIKLFKGFGAKVIA-YD 175 (333)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEE-EC
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEE-EC
Confidence 69999999999998876 22367776 54
No 128
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=46.46 E-value=4.4 Score=32.91 Aligned_cols=27 Identities=30% Similarity=0.308 Sum_probs=21.2
Q ss_pred ceeEeccCceeeeeeec--CCCceEEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS--QPCLRLVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~--~~~~~vva~In 30 (146)
+|||=|+|+||+.+.|. .-..+|++ .+
T Consensus 141 tvGIiG~G~IG~~vA~~l~~~G~~V~~-~d 169 (315)
T 3pp8_A 141 SVGIMGAGVLGAKVAESLQAWGFPLRC-WS 169 (315)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCCEEE-EE
T ss_pred EEEEEeeCHHHHHHHHHHHHCCCEEEE-Ec
Confidence 69999999999998876 22367777 54
No 129
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=44.84 E-value=5.2 Score=33.31 Aligned_cols=26 Identities=31% Similarity=0.450 Sum_probs=21.0
Q ss_pred ceeEeccCceeeeeeec---CCCceEEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS---QPCLRLVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~---~~~~~vva~In 30 (146)
+|||=|+|+||+.+.|. .+ .+|++ .+
T Consensus 178 tvGIIGlG~IG~~vA~~l~~fG-~~V~~-~d 206 (365)
T 4hy3_A 178 EIGIVGFGDLGKALRRVLSGFR-ARIRV-FD 206 (365)
T ss_dssp EEEEECCSHHHHHHHHHHTTSC-CEEEE-EC
T ss_pred EEEEecCCcccHHHHHhhhhCC-CEEEE-EC
Confidence 69999999999999887 44 67776 53
No 130
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=44.73 E-value=5.2 Score=32.28 Aligned_cols=28 Identities=25% Similarity=0.362 Sum_probs=21.8
Q ss_pred ceeEeccCceeeeeeec--CCCceEEEEecC
Q psy6886 3 KIGINGFGRIGLNNLNS--QPCLRLVSMVSD 31 (146)
Q Consensus 3 kv~ingfgriGr~v~r~--~~~~~vva~Ind 31 (146)
++||=|+|+||+.+.|. .-..+|++ .+-
T Consensus 148 ~vgIIG~G~IG~~~A~~l~~~G~~V~~-~d~ 177 (320)
T 1gdh_A 148 TLGIYGFGSIGQALAKRAQGFDMDIDY-FDT 177 (320)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEE-ECS
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEE-ECC
Confidence 69999999999998877 22367777 653
No 131
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=43.81 E-value=4.5 Score=33.00 Aligned_cols=26 Identities=23% Similarity=0.390 Sum_probs=21.2
Q ss_pred ceeEeccCceeeeeeec---CCCceEEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS---QPCLRLVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~---~~~~~vva~In 30 (146)
+|||=|+|+||+.+.|. .+ .+|++ .+
T Consensus 139 tvGIiGlG~IG~~vA~~l~~~G-~~V~~-~d 167 (324)
T 3evt_A 139 QLLIYGTGQIGQSLAAKASALG-MHVIG-VN 167 (324)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEE-EE
T ss_pred eEEEECcCHHHHHHHHHHHhCC-CEEEE-EC
Confidence 69999999999998887 44 67777 54
No 132
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=43.65 E-value=4.7 Score=32.94 Aligned_cols=26 Identities=23% Similarity=0.401 Sum_probs=21.2
Q ss_pred ceeEeccCceeeeeeec---CCCceEEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS---QPCLRLVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~---~~~~~vva~In 30 (146)
+|||=|+|+||+.+.|. .+ .+|++ .+
T Consensus 143 tvgIiG~G~IG~~vA~~l~~~G-~~V~~-~d 171 (334)
T 2pi1_A 143 TLGVIGTGRIGSRVAMYGLAFG-MKVLC-YD 171 (334)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEE-EC
T ss_pred eEEEECcCHHHHHHHHHHHHCc-CEEEE-EC
Confidence 69999999999998887 44 67777 53
No 133
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=43.30 E-value=5.7 Score=32.66 Aligned_cols=27 Identities=22% Similarity=0.351 Sum_probs=21.0
Q ss_pred ceeEeccCceeeeeeec--CCCceEEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS--QPCLRLVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~--~~~~~vva~In 30 (146)
++||=|+|+||+.+.|. .-..+|++ .+
T Consensus 170 tvGIIG~G~IG~~vA~~l~~~G~~V~~-~d 198 (347)
T 1mx3_A 170 TLGIIGLGRVGQAVALRAKAFGFNVLF-YD 198 (347)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEE-EC
T ss_pred EEEEEeECHHHHHHHHHHHHCCCEEEE-EC
Confidence 69999999999998887 22367776 53
No 134
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=43.14 E-value=5.3 Score=32.11 Aligned_cols=26 Identities=23% Similarity=0.310 Sum_probs=20.7
Q ss_pred ceeEeccCceeeeeeec---CCCceEEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS---QPCLRLVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~---~~~~~vva~In 30 (146)
++||=|+|+||+.+.|. .+ .+|++ .+
T Consensus 126 ~vgIIG~G~IG~~~A~~l~~~G-~~V~~-~d 154 (303)
T 1qp8_A 126 KVAVLGLGEIGTRVGKILAALG-AQVRG-FS 154 (303)
T ss_dssp EEEEESCSTHHHHHHHHHHHTT-CEEEE-EC
T ss_pred EEEEEccCHHHHHHHHHHHHCC-CEEEE-EC
Confidence 69999999999998876 44 67766 54
No 135
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=42.94 E-value=5 Score=33.13 Aligned_cols=26 Identities=35% Similarity=0.354 Sum_probs=20.6
Q ss_pred ceeEeccCceeeeeeec---CCCceEEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS---QPCLRLVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~---~~~~~vva~In 30 (146)
+|||=|||+||+.+.|. .+ .+|++ .+
T Consensus 166 tvGIIG~G~IG~~vA~~l~~~G-~~V~~-~d 194 (351)
T 3jtm_A 166 TIGTVGAGRIGKLLLQRLKPFG-CNLLY-HD 194 (351)
T ss_dssp EEEEECCSHHHHHHHHHHGGGC-CEEEE-EC
T ss_pred EEeEEEeCHHHHHHHHHHHHCC-CEEEE-eC
Confidence 69999999999998887 33 56666 54
No 136
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=42.75 E-value=4.9 Score=33.13 Aligned_cols=26 Identities=23% Similarity=0.409 Sum_probs=21.2
Q ss_pred ceeEeccCceeeeeeec---CCCceEEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS---QPCLRLVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~---~~~~~vva~In 30 (146)
+|||=|||+||+.+.|. .+ .+|++ .+
T Consensus 162 tvGIIGlG~IG~~vA~~l~~~G-~~V~~-~d 190 (352)
T 3gg9_A 162 TLGIFGYGKIGQLVAGYGRAFG-MNVLV-WG 190 (352)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEE-EC
T ss_pred EEEEEeECHHHHHHHHHHHhCC-CEEEE-EC
Confidence 69999999999998876 44 67777 53
No 137
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=42.67 E-value=7.5 Score=32.16 Aligned_cols=31 Identities=23% Similarity=0.267 Sum_probs=23.5
Q ss_pred cceeEeccCc---eeeeeeec---CCCceEEEEecCC
Q psy6886 2 SKIGINGFGR---IGLNNLNS---QPCLRLVSMVSDV 32 (146)
Q Consensus 2 ~kv~ingfgr---iGr~v~r~---~~~~~vva~Ind~ 32 (146)
+||||-|.|+ ||+...++ .+.+++||.|-|+
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~ 74 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSS 74 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCS
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCC
Confidence 6899999999 99876665 6779998646554
No 138
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=42.61 E-value=5 Score=33.07 Aligned_cols=26 Identities=19% Similarity=0.410 Sum_probs=21.1
Q ss_pred ceeEeccCceeeeeeec---CCCceEEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS---QPCLRLVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~---~~~~~vva~In 30 (146)
+|||=|||+||+.+.|. .+ .+|++ .+
T Consensus 150 tvgIiGlG~IG~~vA~~l~~~G-~~V~~-~d 178 (343)
T 2yq5_A 150 TVGLIGVGHIGSAVAEIFSAMG-AKVIA-YD 178 (343)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEE-EC
T ss_pred eEEEEecCHHHHHHHHHHhhCC-CEEEE-EC
Confidence 69999999999998877 44 67777 53
No 139
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=42.04 E-value=5.2 Score=32.72 Aligned_cols=26 Identities=27% Similarity=0.387 Sum_probs=21.3
Q ss_pred ceeEeccCceeeeeeec---CCCceEEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS---QPCLRLVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~---~~~~~vva~In 30 (146)
++||=|+|+||+.+.|. .+ .+|++ .+
T Consensus 142 tvGIIGlG~IG~~vA~~l~~~G-~~V~~-~d 170 (324)
T 3hg7_A 142 TLLILGTGSIGQHIAHTGKHFG-MKVLG-VS 170 (324)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEE-EC
T ss_pred eEEEEEECHHHHHHHHHHHhCC-CEEEE-Ec
Confidence 69999999999998877 44 67777 54
No 140
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=41.68 E-value=4.5 Score=34.64 Aligned_cols=30 Identities=23% Similarity=0.411 Sum_probs=24.9
Q ss_pred cceeEeccCceeeeeeec------------CCCceEEEEecCC
Q psy6886 2 SKIGINGFGRIGLNNLNS------------QPCLRLVSMVSDV 32 (146)
Q Consensus 2 ~kv~ingfgriGr~v~r~------------~~~~~vva~Ind~ 32 (146)
+||||-|+|.+|+.+.+. .+++++++ |-|.
T Consensus 11 irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lva-V~d~ 52 (444)
T 3mtj_A 11 IHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVR-AAVR 52 (444)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEE-EECS
T ss_pred ccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEE-EEEC
Confidence 589999999999887753 27899999 8776
No 141
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=41.34 E-value=5.4 Score=32.41 Aligned_cols=27 Identities=19% Similarity=0.327 Sum_probs=21.0
Q ss_pred ceeEeccCceeeeeeec--CCCceEEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS--QPCLRLVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~--~~~~~vva~In 30 (146)
+|||=|+|+||+.+.|. .-..+|++ .+
T Consensus 148 ~vgIiG~G~IG~~~A~~l~~~G~~V~~-~d 176 (333)
T 1j4a_A 148 VVGVVGTGHIGQVFMQIMEGFGAKVIT-YD 176 (333)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEE-EC
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEE-EC
Confidence 69999999999998876 22367776 54
No 142
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=40.85 E-value=6.5 Score=32.31 Aligned_cols=25 Identities=24% Similarity=0.391 Sum_probs=20.0
Q ss_pred ceeEeccCceeeeeeec--CCCceEEE
Q psy6886 3 KIGINGFGRIGLNNLNS--QPCLRLVS 27 (146)
Q Consensus 3 kv~ingfgriGr~v~r~--~~~~~vva 27 (146)
++||=|+|+||+.+.|. .-..+|++
T Consensus 173 tiGIIGlG~IG~~vA~~l~~~G~~V~~ 199 (340)
T 4dgs_A 173 RIGVLGLGQIGRALASRAEAFGMSVRY 199 (340)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 79999999999998876 22357766
No 143
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=40.60 E-value=6 Score=31.50 Aligned_cols=25 Identities=20% Similarity=0.259 Sum_probs=22.3
Q ss_pred cceeEeccCceeeeeeecCCCceEEE
Q psy6886 2 SKIGINGFGRIGLNNLNSQPCLRLVS 27 (146)
Q Consensus 2 ~kv~ingfgriGr~v~r~~~~~~vva 27 (146)
.||++=|+|.||+.+.|.. ++|+|+
T Consensus 13 ~rV~i~G~GaIG~~v~~~~-~leLv~ 37 (253)
T 1j5p_A 13 MTVLIIGMGNIGKKLVELG-NFEKIY 37 (253)
T ss_dssp CEEEEECCSHHHHHHHHHS-CCSEEE
T ss_pred ceEEEECcCHHHHHHHhcC-CcEEEE
Confidence 5899999999999999984 888887
No 144
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=39.17 E-value=6.1 Score=31.81 Aligned_cols=26 Identities=31% Similarity=0.529 Sum_probs=20.9
Q ss_pred ceeEeccCceeeeeeec---CCCceEEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS---QPCLRLVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~---~~~~~vva~In 30 (146)
+|||=|+|+||+.+.|. .+ .+|++ .+
T Consensus 146 ~vgIIG~G~IG~~~A~~l~~~G-~~V~~-~d 174 (311)
T 2cuk_A 146 TLGLVGMGRIGQAVAKRALAFG-MRVVY-HA 174 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEE-EC
T ss_pred EEEEEEECHHHHHHHHHHHHCC-CEEEE-EC
Confidence 69999999999998887 44 67766 54
No 145
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=38.99 E-value=6.5 Score=31.03 Aligned_cols=26 Identities=35% Similarity=0.442 Sum_probs=20.4
Q ss_pred CcceeEeccCceee-eeeec---CCCceEE
Q psy6886 1 MSKIGINGFGRIGL-NNLNS---QPCLRLV 26 (146)
Q Consensus 1 ~~kv~ingfgriGr-~v~r~---~~~~~vv 26 (146)
|+||||-|+|+||+ ...++ .+.++++
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~~~~l~ 31 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWPDIELV 31 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTSTTEEEE
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCCCceEE
Confidence 57999999999997 46665 4667776
No 146
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=38.92 E-value=7 Score=30.70 Aligned_cols=26 Identities=15% Similarity=0.386 Sum_probs=20.9
Q ss_pred ceeEeccCceeeeeeec---CCCceEEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS---QPCLRLVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~---~~~~~vva~In 30 (146)
+|+|-|+|+||+.+.+. .+ .+|+. .+
T Consensus 157 ~v~IiG~G~iG~~~a~~l~~~G-~~V~~-~d 185 (293)
T 3d4o_A 157 NVAVLGLGRVGMSVARKFAALG-AKVKV-GA 185 (293)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEE-EE
T ss_pred EEEEEeeCHHHHHHHHHHHhCC-CEEEE-EE
Confidence 69999999999998887 55 47766 54
No 147
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=38.72 E-value=6.2 Score=31.64 Aligned_cols=26 Identities=35% Similarity=0.584 Sum_probs=20.9
Q ss_pred ceeEeccCceeeeeeec---CCCceEEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS---QPCLRLVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~---~~~~~vva~In 30 (146)
+|||=|+|+||+.+.|. .+ .+|++ .+
T Consensus 144 ~vgIiG~G~IG~~~A~~l~~~G-~~V~~-~d 172 (307)
T 1wwk_A 144 TIGIIGFGRIGYQVAKIANALG-MNILL-YD 172 (307)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEE-EC
T ss_pred eEEEEccCHHHHHHHHHHHHCC-CEEEE-EC
Confidence 69999999999998876 44 67776 54
No 148
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=37.38 E-value=5.1 Score=32.18 Aligned_cols=26 Identities=27% Similarity=0.531 Sum_probs=20.9
Q ss_pred ceeEeccCceeeeeeec---CCCceEEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS---QPCLRLVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~---~~~~~vva~In 30 (146)
++||=|+|+||+.+.|. .+ .+|++ .+
T Consensus 124 tvGIIGlG~IG~~vA~~l~~~G-~~V~~-~d 152 (290)
T 3gvx_A 124 ALGILGYGGIGRRVAHLAKAFG-MRVIA-YT 152 (290)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT-CEEEE-EC
T ss_pred hheeeccCchhHHHHHHHHhhC-cEEEE-Ee
Confidence 79999999999998876 33 57777 53
No 149
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=37.36 E-value=6.8 Score=26.71 Aligned_cols=28 Identities=11% Similarity=0.112 Sum_probs=21.7
Q ss_pred CcceeEeccCceeeeeeec--CCCceEEEEe
Q psy6886 1 MSKIGINGFGRIGLNNLNS--QPCLRLVSMV 29 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~--~~~~~vva~I 29 (146)
|-++.|=|+|++|+.+.+. ....+|+. +
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~-i 35 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLA-V 35 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEE-E
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEE-E
Confidence 3479999999999988887 33467777 5
No 150
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=37.21 E-value=6.2 Score=27.27 Aligned_cols=26 Identities=23% Similarity=0.330 Sum_probs=21.0
Q ss_pred ceeEeccCceeeeeeec--CCCceEEEEe
Q psy6886 3 KIGINGFGRIGLNNLNS--QPCLRLVSMV 29 (146)
Q Consensus 3 kv~ingfgriGr~v~r~--~~~~~vva~I 29 (146)
++.|=|+|++|+.+.+. ....+++. |
T Consensus 9 ~viIiG~G~~G~~la~~L~~~g~~v~v-i 36 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLASDIPLVV-I 36 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEE-E
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEE-E
Confidence 68899999999998887 34467777 6
No 151
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=36.82 E-value=6.9 Score=31.45 Aligned_cols=27 Identities=33% Similarity=0.511 Sum_probs=20.9
Q ss_pred ceeEeccCceeeeeeec--CCCceEEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS--QPCLRLVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~--~~~~~vva~In 30 (146)
+|||=|+|+||+.+.|. .-..+|++ .+
T Consensus 144 ~vgIIG~G~IG~~~A~~l~~~G~~V~~-~d 172 (313)
T 2ekl_A 144 TIGIVGFGRIGTKVGIIANAMGMKVLA-YD 172 (313)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEE-EC
T ss_pred EEEEEeeCHHHHHHHHHHHHCCCEEEE-EC
Confidence 69999999999998876 22367776 54
No 152
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=35.80 E-value=7.4 Score=32.67 Aligned_cols=24 Identities=29% Similarity=0.364 Sum_probs=19.9
Q ss_pred ceeEeccCceeeeeeec---CCCceEEE
Q psy6886 3 KIGINGFGRIGLNNLNS---QPCLRLVS 27 (146)
Q Consensus 3 kv~ingfgriGr~v~r~---~~~~~vva 27 (146)
++||=|+|+||+.+.|. .+ .+|++
T Consensus 147 tlGiIGlG~IG~~vA~~l~~~G-~~V~~ 173 (404)
T 1sc6_A 147 KLGIIGYGHIGTQLGILAESLG-MYVYF 173 (404)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEE
T ss_pred EEEEEeECHHHHHHHHHHHHCC-CEEEE
Confidence 69999999999998876 44 67766
No 153
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=35.22 E-value=7.8 Score=32.57 Aligned_cols=26 Identities=31% Similarity=0.423 Sum_probs=20.7
Q ss_pred ceeEeccCceeeeeeec---CCCceEEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS---QPCLRLVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~---~~~~~vva~In 30 (146)
++||=|||+||+.+.|. .+ .+|++ .+
T Consensus 193 tvGIIGlG~IG~~vA~~l~a~G-~~V~~-~d 221 (393)
T 2nac_A 193 HVGTVAAGRIGLAVLRRLAPFD-VHLHY-TD 221 (393)
T ss_dssp EEEEECCSHHHHHHHHHHGGGT-CEEEE-EC
T ss_pred EEEEEeECHHHHHHHHHHHhCC-CEEEE-Ec
Confidence 69999999999998876 44 67766 54
No 154
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=35.16 E-value=7.2 Score=32.15 Aligned_cols=26 Identities=31% Similarity=0.391 Sum_probs=20.5
Q ss_pred ceeEeccCceeeeeeec---CCCce-EEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS---QPCLR-LVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~---~~~~~-vva~In 30 (146)
+|||-|||+||+.+.|. .+ .+ |++ .+
T Consensus 166 tvgIIG~G~IG~~vA~~l~~~G-~~~V~~-~d 195 (364)
T 2j6i_A 166 TIATIGAGRIGYRVLERLVPFN-PKELLY-YD 195 (364)
T ss_dssp EEEEECCSHHHHHHHHHHGGGC-CSEEEE-EC
T ss_pred EEEEECcCHHHHHHHHHHHhCC-CcEEEE-EC
Confidence 69999999999998876 44 54 766 54
No 155
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=34.48 E-value=9 Score=31.21 Aligned_cols=25 Identities=32% Similarity=0.473 Sum_probs=19.8
Q ss_pred ceeEeccCceeeeeeec--CCCceEEE
Q psy6886 3 KIGINGFGRIGLNNLNS--QPCLRLVS 27 (146)
Q Consensus 3 kv~ingfgriGr~v~r~--~~~~~vva 27 (146)
|+||=|+|+||+.+.|. .-..+|+.
T Consensus 166 ~vgIIG~G~iG~~vA~~l~~~G~~V~~ 192 (333)
T 3ba1_A 166 RVGIIGLGRIGLAVAERAEAFDCPISY 192 (333)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCCEEE
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 79999999999998887 22356666
No 156
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=33.52 E-value=8.5 Score=32.32 Aligned_cols=24 Identities=29% Similarity=0.451 Sum_probs=20.0
Q ss_pred ceeEeccCceeeeeeec---CCCceEEE
Q psy6886 3 KIGINGFGRIGLNNLNS---QPCLRLVS 27 (146)
Q Consensus 3 kv~ingfgriGr~v~r~---~~~~~vva 27 (146)
+|||=|+|+||+.+.|. .+ .+|++
T Consensus 121 tvGIIGlG~IG~~vA~~l~a~G-~~V~~ 147 (381)
T 3oet_A 121 TIGIVGVGNVGSRLQTRLEALG-IRTLL 147 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEE
T ss_pred EEEEEeECHHHHHHHHHHHHCC-CEEEE
Confidence 69999999999998887 44 67777
No 157
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=33.03 E-value=8.8 Score=31.09 Aligned_cols=27 Identities=33% Similarity=0.390 Sum_probs=20.6
Q ss_pred ceeEeccCceeeeeeec--CCCceEEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS--QPCLRLVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~--~~~~~vva~In 30 (146)
+|||=|+|+||+.+.+. .-..+|++ .+
T Consensus 148 ~vgIIG~G~iG~~vA~~l~~~G~~V~~-~d 176 (333)
T 2d0i_A 148 KVGILGMGAIGKAIARRLIPFGVKLYY-WS 176 (333)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCEEEE-EC
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEE-EC
Confidence 69999999999998876 22357766 53
No 158
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=32.95 E-value=11 Score=28.67 Aligned_cols=26 Identities=19% Similarity=0.373 Sum_probs=20.6
Q ss_pred CcceeEeccCceeeeeeec--CCCceEEE
Q psy6886 1 MSKIGINGFGRIGLNNLNS--QPCLRLVS 27 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~--~~~~~vva 27 (146)
|.||+|=|.|.+|+.+.+. . ..+|+.
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~-g~~V~~ 28 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR-RFPTLV 28 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT-TSCEEE
T ss_pred CCeEEEEcccHHHHHHHHHHhC-CCeEEE
Confidence 6799999999999987776 5 667655
No 159
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=31.80 E-value=9.4 Score=31.94 Aligned_cols=24 Identities=17% Similarity=0.349 Sum_probs=19.9
Q ss_pred ceeEeccCceeeeeeec---CCCceEEE
Q psy6886 3 KIGINGFGRIGLNNLNS---QPCLRLVS 27 (146)
Q Consensus 3 kv~ingfgriGr~v~r~---~~~~~vva 27 (146)
+|||=|+|+||+.+.|. .+ .+|++
T Consensus 118 tvGIIGlG~IG~~vA~~l~~~G-~~V~~ 144 (380)
T 2o4c_A 118 TYGVVGAGQVGGRLVEVLRGLG-WKVLV 144 (380)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHCC-CEEEE
Confidence 69999999999998876 44 67766
No 160
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=29.94 E-value=12 Score=29.37 Aligned_cols=26 Identities=15% Similarity=0.322 Sum_probs=20.8
Q ss_pred ceeEeccCceeeeeeec---CCCceEEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS---QPCLRLVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~---~~~~~vva~In 30 (146)
+++|=|+|+||+.+.|. .+ .+|.+ .+
T Consensus 159 ~v~IiG~G~iG~~~a~~l~~~G-~~V~~-~d 187 (300)
T 2rir_A 159 QVAVLGLGRTGMTIARTFAALG-ANVKV-GA 187 (300)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEE-EE
T ss_pred EEEEEcccHHHHHHHHHHHHCC-CEEEE-EE
Confidence 69999999999999887 45 47666 54
No 161
>1dw9_A Cyanate lyase; cyanate degradation, structural genomics, PSI, protei structure initiative, midwest center for structural genomic; HET: SO4; 1.65A {Escherichia coli} SCOP: a.35.1.4 d.72.1.1 PDB: 1dwk_A* 2ivq_A 2ivb_A 2iu7_A 2iv1_A 2iuo_A 2ivg_A
Probab=29.59 E-value=18 Score=26.94 Aligned_cols=29 Identities=24% Similarity=0.705 Sum_probs=20.8
Q ss_pred HHhhhceeeeeeeeeeeeccCccccccCCCCC
Q psy6886 60 KVIHDNFEIVEGLMTTVHATTATQKTVDGPSG 91 (146)
Q Consensus 60 kvi~~~fgI~~g~mTtvha~t~~Q~~~D~p~~ 91 (146)
.+||++|| .|.|..|--.+.-|+..| |.+
T Consensus 110 ~li~E~FG--DGIMSAIdF~~~v~k~~d-p~G 138 (156)
T 1dw9_A 110 ALVHEKFG--DGIISAINFKLDVKKVAD-PEG 138 (156)
T ss_dssp HHHHHHTC--SEEEEEEEEEEEEEEEEC-TTS
T ss_pred HHHHHHcC--cceEeeeeeeeeeEeecC-CCC
Confidence 46999999 577777776667777655 654
No 162
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=29.31 E-value=11 Score=30.44 Aligned_cols=28 Identities=36% Similarity=0.500 Sum_probs=21.1
Q ss_pred cceeEeccCceeeeeeec--CCCceEEEEec
Q psy6886 2 SKIGINGFGRIGLNNLNS--QPCLRLVSMVS 30 (146)
Q Consensus 2 ~kv~ingfgriGr~v~r~--~~~~~vva~In 30 (146)
.+|||=|+|+||+.+.+. .-..+|++ .+
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~-~d 180 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFNMRILY-YS 180 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE-EC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEE-EC
Confidence 379999999999988876 22367766 53
No 163
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=28.95 E-value=13 Score=23.83 Aligned_cols=27 Identities=19% Similarity=0.151 Sum_probs=21.1
Q ss_pred CcceeEeccCceeeeeeec---CCCceEEE
Q psy6886 1 MSKIGINGFGRIGLNNLNS---QPCLRLVS 27 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~~~~~vva 27 (146)
|.||.|-|-|.+|+.+.+. .+..+|+.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~ 34 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTV 34 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEE
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEE
Confidence 3579999999999988876 45467766
No 164
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=28.84 E-value=10 Score=30.48 Aligned_cols=27 Identities=26% Similarity=0.362 Sum_probs=20.5
Q ss_pred ceeEeccCceeeeeeec--CCCceEEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS--QPCLRLVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~--~~~~~vva~In 30 (146)
||||=|+|+||+.+.+. .-..+|++ .+
T Consensus 157 ~vgIIG~G~iG~~iA~~l~~~G~~V~~-~d 185 (330)
T 2gcg_A 157 TVGIIGLGRIGQAIARRLKPFGVQRFL-YT 185 (330)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEE-EE
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEE-EC
Confidence 79999999999998876 22356666 54
No 165
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=28.05 E-value=12 Score=31.77 Aligned_cols=24 Identities=29% Similarity=0.439 Sum_probs=19.7
Q ss_pred ceeEeccCceeeeeeec---CCCceEEE
Q psy6886 3 KIGINGFGRIGLNNLNS---QPCLRLVS 27 (146)
Q Consensus 3 kv~ingfgriGr~v~r~---~~~~~vva 27 (146)
++||=|+|+||+.+.|. .+ .+|++
T Consensus 158 tvGIIGlG~IG~~vA~~l~~~G-~~V~~ 184 (416)
T 3k5p_A 158 TLGIVGYGNIGSQVGNLAESLG-MTVRY 184 (416)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEE
T ss_pred EEEEEeeCHHHHHHHHHHHHCC-CEEEE
Confidence 69999999999998876 44 57766
No 166
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=27.45 E-value=12 Score=29.48 Aligned_cols=28 Identities=36% Similarity=0.491 Sum_probs=22.2
Q ss_pred cceeEecc-Cceeeeeeec--CCCceEEEEe
Q psy6886 2 SKIGINGF-GRIGLNNLNS--QPCLRLVSMV 29 (146)
Q Consensus 2 ~kv~ingf-griGr~v~r~--~~~~~vva~I 29 (146)
.|-+|+|. ||+||.+.+. .++.++|+.+
T Consensus 13 ~~~~v~Ga~GrMG~~i~~~~~~~~~elv~~i 43 (228)
T 1vm6_A 13 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKV 43 (228)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ceeEEEEecCHHHHHHHHHHhCCCCEEEEEE
Confidence 57889997 9999988666 6778888833
No 167
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=26.97 E-value=13 Score=31.93 Aligned_cols=24 Identities=21% Similarity=0.361 Sum_probs=19.5
Q ss_pred ceeEeccCceeeeeeec---CCCceEEE
Q psy6886 3 KIGINGFGRIGLNNLNS---QPCLRLVS 27 (146)
Q Consensus 3 kv~ingfgriGr~v~r~---~~~~~vva 27 (146)
+|+|-|+|+||+.+.+. .+ .+|+.
T Consensus 213 tVgIiG~G~IG~~vA~~Lka~G-a~Viv 239 (436)
T 3h9u_A 213 TACVCGYGDVGKGCAAALRGFG-ARVVV 239 (436)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEE
T ss_pred EEEEEeeCHHHHHHHHHHHHCC-CEEEE
Confidence 69999999999998876 44 56655
No 168
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=26.15 E-value=14 Score=28.26 Aligned_cols=29 Identities=21% Similarity=0.280 Sum_probs=21.9
Q ss_pred CcceeEeccCceeeeeeec--CCCceEEEEec
Q psy6886 1 MSKIGINGFGRIGLNNLNS--QPCLRLVSMVS 30 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~--~~~~~vva~In 30 (146)
|.||+|=|.|.+|+.+.+. ....+|+. ++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~-~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAGHQLHV-TT 33 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTTCEEEE-CC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEE-Ec
Confidence 5689999999999988776 33367766 55
No 169
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=25.80 E-value=12 Score=29.61 Aligned_cols=29 Identities=24% Similarity=0.318 Sum_probs=22.2
Q ss_pred cceeEecc-Cceeeeeeec--CCCceEEEEec
Q psy6886 2 SKIGINGF-GRIGLNNLNS--QPCLRLVSMVS 30 (146)
Q Consensus 2 ~kv~ingf-griGr~v~r~--~~~~~vva~In 30 (146)
.||+|-|+ |++|+.+.|. ....++|+.+|
T Consensus 8 ~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~ 39 (288)
T 2nu8_A 8 TKVICQGFTGSQGTFHSEQAIAYGTKMVGGVT 39 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEeC
Confidence 68999999 9999998887 22467776354
No 170
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=25.16 E-value=17 Score=31.31 Aligned_cols=25 Identities=28% Similarity=0.414 Sum_probs=20.2
Q ss_pred ceeEeccCceeeeeeec--CCCceEEE
Q psy6886 3 KIGINGFGRIGLNNLNS--QPCLRLVS 27 (146)
Q Consensus 3 kv~ingfgriGr~v~r~--~~~~~vva 27 (146)
++||=|+|+||+.+.|. .-..+|++
T Consensus 144 ~vgIIG~G~IG~~vA~~l~~~G~~V~~ 170 (529)
T 1ygy_A 144 TVGVVGLGRIGQLVAQRIAAFGAYVVA 170 (529)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEE
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCEEEE
Confidence 69999999999998877 33367777
No 171
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=25.10 E-value=11 Score=30.84 Aligned_cols=46 Identities=17% Similarity=0.354 Sum_probs=37.3
Q ss_pred CCCCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeecCC
Q psy6886 89 PSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPVAN 137 (146)
Q Consensus 89 p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~~~ 137 (146)
|...+|.+. ...++-++||.+.+.+++-.+|+++.++..+..|..+
T Consensus 77 p~~l~w~~~---gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps~d 122 (331)
T 2g82_O 77 PKEIPWAEA---GVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKG 122 (331)
T ss_dssp GGGSCTTTT---TEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBS
T ss_pred hhhCccccc---CCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCCcC
Confidence 444568643 2389999999999999999999999999999988764
No 172
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=24.80 E-value=18 Score=31.46 Aligned_cols=24 Identities=17% Similarity=0.225 Sum_probs=19.9
Q ss_pred ceeEeccCceeeeeeec---CCCceEEE
Q psy6886 3 KIGINGFGRIGLNNLNS---QPCLRLVS 27 (146)
Q Consensus 3 kv~ingfgriGr~v~r~---~~~~~vva 27 (146)
+|+|=|+|+||+.+.|. .+ .+|+.
T Consensus 279 tVgIIG~G~IG~~vA~~l~~~G-~~V~v 305 (494)
T 3d64_A 279 IAVVAGYGDVGKGCAQSLRGLG-ATVWV 305 (494)
T ss_dssp EEEEECCSHHHHHHHHHHHTTT-CEEEE
T ss_pred EEEEEccCHHHHHHHHHHHHCC-CEEEE
Confidence 69999999999999887 44 67666
No 173
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=24.68 E-value=11 Score=30.80 Aligned_cols=27 Identities=22% Similarity=0.274 Sum_probs=20.4
Q ss_pred ceeEeccCceeeeeeec-C--CCceEEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS-Q--PCLRLVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~-~--~~~~vva~In 30 (146)
++||=|+|+||+.+.+. . -..+|++ .+
T Consensus 165 ~vgIIG~G~IG~~vA~~l~~~~G~~V~~-~d 194 (348)
T 2w2k_A 165 VLGAVGLGAIQKEIARKAVHGLGMKLVY-YD 194 (348)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEE-EC
T ss_pred EEEEEEECHHHHHHHHHHHHhcCCEEEE-EC
Confidence 69999999999988775 2 2357766 54
No 174
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=24.49 E-value=17 Score=27.80 Aligned_cols=27 Identities=22% Similarity=0.204 Sum_probs=20.7
Q ss_pred CcceeEeccCceeeeeeec---CC-CceEEE
Q psy6886 1 MSKIGINGFGRIGLNNLNS---QP-CLRLVS 27 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~---~~-~~~vva 27 (146)
|.||+|=|.|.+|+.+.+. .+ ..+|+.
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~ 31 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYG 31 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTCCSEEEE
T ss_pred CcEEEEEecCHHHHHHHHHHHhcCCCcEEEE
Confidence 6799999999999988776 33 236665
No 175
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=24.21 E-value=24 Score=29.06 Aligned_cols=29 Identities=28% Similarity=0.279 Sum_probs=22.9
Q ss_pred cceeEeccCceeeeeeec---C-CCceEEEEecCC
Q psy6886 2 SKIGINGFGRIGLNNLNS---Q-PCLRLVSMVSDV 32 (146)
Q Consensus 2 ~kv~ingfgriGr~v~r~---~-~~~~vva~Ind~ 32 (146)
+||+|=|-| +|+.-+++ . +.+++|+ |-|.
T Consensus 8 ~rv~VvG~G-~g~~h~~a~~~~~~~~elva-v~~~ 40 (372)
T 4gmf_A 8 QRVLIVGAK-FGEMYLNAFMQPPEGLELVG-LLAQ 40 (372)
T ss_dssp EEEEEECST-TTHHHHHTTSSCCTTEEEEE-EECC
T ss_pred CEEEEEehH-HHHHHHHHHHhCCCCeEEEE-EECC
Confidence 689999998 68876666 3 4699999 8775
No 176
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=23.90 E-value=19 Score=29.56 Aligned_cols=28 Identities=21% Similarity=0.330 Sum_probs=24.5
Q ss_pred CcceeEec-cCceeeeeeec---CCCceEEEEe
Q psy6886 1 MSKIGING-FGRIGLNNLNS---QPCLRLVSMV 29 (146)
Q Consensus 1 ~~kv~ing-fgriGr~v~r~---~~~~~vva~I 29 (146)
|.||+|-| -|.+|+.+.|. ++++++++ +
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~-l 35 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITA-L 35 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEE-E
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEE-E
Confidence 78999999 69999998887 69999988 5
No 177
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=23.86 E-value=20 Score=27.71 Aligned_cols=27 Identities=22% Similarity=0.345 Sum_probs=21.1
Q ss_pred CcceeEeccCceeeeeeec--CCCceEEE
Q psy6886 1 MSKIGINGFGRIGLNNLNS--QPCLRLVS 27 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~--~~~~~vva 27 (146)
|.||+|=|.|.+|+.+.+. ....+|+.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~ 31 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNV 31 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEE
Confidence 6799999999999887776 23356666
No 178
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=23.62 E-value=20 Score=29.71 Aligned_cols=30 Identities=27% Similarity=0.400 Sum_probs=25.8
Q ss_pred CcceeEe-ccCceeeeeeec---CCCceEEEEecC
Q psy6886 1 MSKIGIN-GFGRIGLNNLNS---QPCLRLVSMVSD 31 (146)
Q Consensus 1 ~~kv~in-gfgriGr~v~r~---~~~~~vva~Ind 31 (146)
|+||+|= +.|..|+-++|. +|.+|+++ +..
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~-l~S 46 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPEAKITY-LSS 46 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEE-EEC
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCCcEEEE-EeC
Confidence 7899997 489999999987 89999998 764
No 179
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=23.55 E-value=16 Score=31.65 Aligned_cols=24 Identities=21% Similarity=0.347 Sum_probs=19.7
Q ss_pred ceeEeccCceeeeeeec---CCCceEEE
Q psy6886 3 KIGINGFGRIGLNNLNS---QPCLRLVS 27 (146)
Q Consensus 3 kv~ingfgriGr~v~r~---~~~~~vva 27 (146)
+|+|-|||+||+.+.+. .+ .+|++
T Consensus 249 TVgVIG~G~IGr~vA~~lrafG-a~Viv 275 (464)
T 3n58_A 249 VAVVCGYGDVGKGSAQSLAGAG-ARVKV 275 (464)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEE
T ss_pred EEEEECcCHHHHHHHHHHHHCC-CEEEE
Confidence 58999999999999876 55 57666
No 180
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=22.71 E-value=22 Score=26.72 Aligned_cols=19 Identities=32% Similarity=0.539 Sum_probs=16.9
Q ss_pred CcceeEeccCceeeeeeec
Q psy6886 1 MSKIGINGFGRIGLNNLNS 19 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~ 19 (146)
|.||+|=|.|.+|+...+.
T Consensus 3 ~m~i~iiG~G~mG~~~a~~ 21 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKG 21 (259)
T ss_dssp CCEEEEECCSHHHHHHHHH
T ss_pred ccEEEEECCCHHHHHHHHH
Confidence 5799999999999988776
No 181
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=22.12 E-value=12 Score=26.64 Aligned_cols=27 Identities=22% Similarity=0.351 Sum_probs=21.3
Q ss_pred ceeEeccCceeeeeeec--CC-CceEEEEec
Q psy6886 3 KIGINGFGRIGLNNLNS--QP-CLRLVSMVS 30 (146)
Q Consensus 3 kv~ingfgriGr~v~r~--~~-~~~vva~In 30 (146)
+|.|=|+|++|+.+.+. .. ..+|+. +.
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~~~g~~V~v-id 70 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRARYGKISLG-IE 70 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHCSCEEE-EE
T ss_pred cEEEECCCHHHHHHHHHHHhccCCeEEE-EE
Confidence 68999999999998887 33 467777 63
No 182
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=21.59 E-value=13 Score=30.89 Aligned_cols=47 Identities=23% Similarity=0.344 Sum_probs=38.4
Q ss_pred CCCCCCcCcccccceeeecccCccceeeeeecCCCCCcceEEEeeecCCe
Q psy6886 89 PSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPVANV 138 (146)
Q Consensus 89 p~~~~~r~~r~a~~niIP~sTgaakav~kviP~L~Gk~~g~a~~VP~~~~ 138 (146)
|...+|.+. ...|+-++||.+.+.++.-.|++++.+...++.|.+++
T Consensus 80 p~~~~w~~~---gvDiV~estG~~~s~e~a~~hl~aGakkVvisaps~dv 126 (342)
T 2ep7_A 80 PSQIPWGDL---GVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAKNP 126 (342)
T ss_dssp GGGCCHHHH---TCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCCBSC
T ss_pred hhhCCcccc---CCCEEEECCCchhhhhhhHHHHhcCCCEEEecCCCCCC
Confidence 545578632 23899999999999999999999998889999997764
No 183
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=21.24 E-value=24 Score=30.00 Aligned_cols=30 Identities=23% Similarity=0.447 Sum_probs=25.2
Q ss_pred cceeEeccCceeeeeeec--CCCceEEEEecCC
Q psy6886 2 SKIGINGFGRIGLNNLNS--QPCLRLVSMVSDV 32 (146)
Q Consensus 2 ~kv~ingfgriGr~v~r~--~~~~~vva~Ind~ 32 (146)
.+|.|-|||-.|..+.+. ....+||| |.|.
T Consensus 211 k~vaVqG~GnVG~~aa~~L~e~GakVVa-vsD~ 242 (421)
T 1v9l_A 211 KTVAIQGMGNVGRWTAYWLEKMGAKVIA-VSDI 242 (421)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEE-EECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEE-EECC
Confidence 368999999999988876 56799999 8885
No 184
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=21.13 E-value=17 Score=27.11 Aligned_cols=31 Identities=19% Similarity=0.229 Sum_probs=22.6
Q ss_pred CcceeEeccCceeeeeeec--CCCceEEEEecCC
Q psy6886 1 MSKIGINGFGRIGLNNLNS--QPCLRLVSMVSDV 32 (146)
Q Consensus 1 ~~kv~ingfgriGr~v~r~--~~~~~vva~Ind~ 32 (146)
|.||+|=|.|.+|..+.+. ....+|+. +.|.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~-v~~r 55 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAII-ANSR 55 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEE-ECTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEE-EECC
Confidence 5799999999999988776 23356655 4554
No 185
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=21.05 E-value=19 Score=30.60 Aligned_cols=31 Identities=19% Similarity=0.466 Sum_probs=25.0
Q ss_pred cceeEeccCceeeeeeec--CCCceEEEEecCCc
Q psy6886 2 SKIGINGFGRIGLNNLNS--QPCLRLVSMVSDVL 33 (146)
Q Consensus 2 ~kv~ingfgriGr~v~r~--~~~~~vva~Ind~~ 33 (146)
.+|.|-|||-.|+.+.+. .....||| |.|..
T Consensus 213 ~~vaVqG~GnVG~~~a~~L~~~GakvVa-vsD~~ 245 (421)
T 2yfq_A 213 AKIAVQGFGNVGTFTVKNIERQGGKVCA-IAEWD 245 (421)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEE-CCBCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEE-EEecC
Confidence 368999999999988876 44589999 88763
No 186
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=20.84 E-value=18 Score=30.16 Aligned_cols=26 Identities=27% Similarity=0.482 Sum_probs=21.4
Q ss_pred ceeEeccCceeeeeeec--CCCceEEEEe
Q psy6886 3 KIGINGFGRIGLNNLNS--QPCLRLVSMV 29 (146)
Q Consensus 3 kv~ingfgriGr~v~r~--~~~~~vva~I 29 (146)
+|-|=||||+|+.+.|. ....++++ |
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~g~~vvv-I 33 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSSGVKMVV-L 33 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEE-E
T ss_pred eEEEECCCHHHHHHHHHHHHCCCCEEE-E
Confidence 68899999999999987 44577777 6
No 187
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=20.79 E-value=21 Score=30.58 Aligned_cols=30 Identities=30% Similarity=0.587 Sum_probs=24.7
Q ss_pred cceeEeccCceeeeeeec--CCCceEEEEecCC
Q psy6886 2 SKIGINGFGRIGLNNLNS--QPCLRLVSMVSDV 32 (146)
Q Consensus 2 ~kv~ingfgriGr~v~r~--~~~~~vva~Ind~ 32 (146)
.+|.|-|||-.|+.+.+. .....||+ |.|.
T Consensus 236 ~~vaVqGfGnVG~~~a~~L~e~GakvVa-vsD~ 267 (440)
T 3aog_A 236 ARVAIQGFGNVGNAAARAFHDHGARVVA-VQDH 267 (440)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEE-EECS
T ss_pred CEEEEeccCHHHHHHHHHHHHCCCEEEE-EEcC
Confidence 368999999999988876 45588999 8875
No 188
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=20.14 E-value=16 Score=24.21 Aligned_cols=26 Identities=15% Similarity=0.356 Sum_probs=19.4
Q ss_pred cceeEeccCceeeeeeec--CCCceEEE
Q psy6886 2 SKIGINGFGRIGLNNLNS--QPCLRLVS 27 (146)
Q Consensus 2 ~kv~ingfgriGr~v~r~--~~~~~vva 27 (146)
-+|.|=|.|++|+.+.+. ....+|+.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~ 34 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLA 34 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 469999999999988877 22345655
Done!