BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6889
(166 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q28824|MYLK_BOVIN Myosin light chain kinase, smooth muscle OS=Bos taurus GN=MYLK PE=1
SV=1
Length = 1176
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 82/135 (60%), Gaps = 30/135 (22%)
Query: 31 SVRPSQISR---SVRPSQIPR---SVRPSQIPR---SVRPSQIPGP---VRPSQIP---G 75
S +P++ + +V+P++ P+ S +P++ P+ S +P++ P P V+P++ P G
Sbjct: 118 STKPAETPKPLGNVKPAETPKPLGSTKPAETPKPLGSTKPAETPKPLGNVKPAETPKPLG 177
Query: 76 SVRPSQIP---GSVRPSQIPR---SVRPSQIP---GSVRPSQIP---GSVRPSQIP---G 120
+++P++ P GS +P++ P+ S +P++ P G+V+P++ P G+V+P++ P G
Sbjct: 178 NIKPTETPKPLGSTKPAETPKPLGSTKPAETPKPLGNVKPAETPKPLGNVKPAETPKPLG 237
Query: 121 SVRPSQIPRKSKEPK 135
+V+P++ P+ K
Sbjct: 238 NVKPAETPKPVSNAK 252
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 76/126 (60%), Gaps = 24/126 (19%)
Query: 31 SVRPSQISR---SVRPSQIPR---SVRPSQIPR---SVRPSQIPGP---VRPSQIP---G 75
+V+P++ + +++P++ P+ S +P++ P+ S +P++ P P V+P++ P G
Sbjct: 166 NVKPAETPKPLGNIKPTETPKPLGSTKPAETPKPLGSTKPAETPKPLGNVKPAETPKPLG 225
Query: 76 SVRPSQIP---GSVRPSQIPRSVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQIPRKSK 132
+V+P++ P G+V+P++ P+ V ++ +++P G+ +P++ P +P + ++
Sbjct: 226 NVKPAETPKPLGNVKPAETPKPVSNAKPAETLKPV---GNAKPAETP---KPLSNVKPAE 279
Query: 133 EPKLMG 138
PKL+G
Sbjct: 280 TPKLVG 285
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 66/114 (57%), Gaps = 24/114 (21%)
Query: 31 SVRPSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIP---GSVR 87
+ +PS + V +++ + +P S +P++ P P+ G+V+P++ P GS +
Sbjct: 94 NAQPSGFLKPVGNAKLADTPKPLS---STKPAETPKPL------GNVKPAETPKPLGSTK 144
Query: 88 PSQIPR---SVRPSQIP---GSVRPSQIP---GSVRPSQIP---GSVRPSQIPR 129
P++ P+ S +P++ P G+V+P++ P G+++P++ P GS +P++ P+
Sbjct: 145 PAETPKPLGSTKPAETPKPLGNVKPAETPKPLGNIKPTETPKPLGSTKPAETPK 198
Score = 39.3 bits (90), Expect = 0.013, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 80/136 (58%), Gaps = 30/136 (22%)
Query: 31 SVRPSQISR---SVRPSQIPR---SVRPSQIPR---SVRPSQIPGP---VRPSQIPGSV- 77
S +P++ + S +P++ P+ +V+P++ P+ +V+P++ P P V+P++ P V
Sbjct: 190 STKPAETPKPLGSTKPAETPKPLGNVKPAETPKPLGNVKPAETPKPLGNVKPAETPKPVS 249
Query: 78 --RPSQI---PGSVRPSQIPR---SVRPSQIP---GSVRPSQIP---GSVRPSQIP---G 120
+P++ G+ +P++ P+ +V+P++ P G+ +P++ + +P++ P G
Sbjct: 250 NAKPAETLKPVGNAKPAETPKPLSNVKPAETPKLVGNAKPAETSKPLDNAKPAEAPKPLG 309
Query: 121 SVRPSQIPRKSKEPKL 136
+ +P++IP+ + + +L
Sbjct: 310 NAKPAEIPKPTGKEEL 325
Score = 29.6 bits (65), Expect = 9.1, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 15/75 (20%)
Query: 67 PVRPSQIPGSVRPSQIPGSVRPSQIPR---SVRPSQIP---GSVRPSQIP---GSVRPSQ 117
PV +Q G ++P G+ + + P+ S +P++ P G+V+P++ P GS +P++
Sbjct: 91 PVGNAQPSGFLKPV---GNAKLADTPKPLSSTKPAETPKPLGNVKPAETPKPLGSTKPAE 147
Query: 118 IP---GSVRPSQIPR 129
P GS +P++ P+
Sbjct: 148 TPKPLGSTKPAETPK 162
>sp|P38486|LEG3_CANFA Galectin-3 OS=Canis familiaris GN=LGALS3 PE=1 SV=3
Length = 296
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 35/113 (30%), Gaps = 5/113 (4%)
Query: 25 SQNEGRSVRPSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPG 84
+Q G P P Q P P Q P P Q P P PG P PG
Sbjct: 28 NQPAGAGGYPGASYPGAYPGQAPPGGYPGQAPPGGYPGQAP----PGGYPGQAPPGGYPG 83
Query: 85 SVRPSQIPRSVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQIPRKSKEPKLM 137
P P P PG P PG P+ PG P P + P
Sbjct: 84 QAPPGGYPGQAPPGGYPGQAPPGTYPGPTAPA-YPGPTAPGTQPGQPSGPGAY 135
>sp|P16110|LEG3_MOUSE Galectin-3 OS=Mus musculus GN=Lgals3 PE=1 SV=3
Length = 264
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 24/71 (33%)
Query: 64 IPGPVRPSQIPGSVRPSQIPGSVRPSQIPRSVRPSQIPGSVRPSQIPGSVRPSQIPGSVR 123
PG P PG P PG P P PS PG P PG P PG
Sbjct: 35 YPGAAYPGAYPGQAPPGAYPGQAPPGAYPGQAPPSAYPGPTAPGAYPGPTAPGAYPGQPA 94
Query: 124 PSQIPRKSKEP 134
P P + P
Sbjct: 95 PGAFPGQPGAP 105
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 24/80 (30%), Gaps = 4/80 (5%)
Query: 23 KWSQNEGRSVRPSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQI 82
W G P P Q P P Q P P Q P PS PG P
Sbjct: 25 AWGNQPGAGGYPGAAYPGAYPGQAPPGAYPGQAPPGAYPGQAP----PSAYPGPTAPGAY 80
Query: 83 PGSVRPSQIPRSVRPSQIPG 102
PG P P P PG
Sbjct: 81 PGPTAPGAYPGQPAPGAFPG 100
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 23/66 (34%)
Query: 55 IPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPRSVRPSQIPGSVRPSQIPGSVR 114
P + P PG P PG P PG PS P P PG P PG
Sbjct: 35 YPGAAYPGAYPGQAPPGAYPGQAPPGAYPGQAPPSAYPGPTAPGAYPGPTAPGAYPGQPA 94
Query: 115 PSQIPG 120
P PG
Sbjct: 95 PGAFPG 100
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 22/66 (33%)
Query: 46 IPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPRSVRPSQIPGSVR 105
P + P P P PG P PG PS PG P P P PG
Sbjct: 35 YPGAAYPGAYPGQAPPGAYPGQAPPGAYPGQAPPSAYPGPTAPGAYPGPTAPGAYPGQPA 94
Query: 106 PSQIPG 111
P PG
Sbjct: 95 PGAFPG 100
>sp|P08699|LEG3_RAT Galectin-3 OS=Rattus norvegicus GN=Lgals3 PE=1 SV=4
Length = 262
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 23/70 (32%), Gaps = 4/70 (5%)
Query: 23 KWSQNEGRSVRPSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQI 82
W G P P Q P P Q P PS PGP PS PG P
Sbjct: 25 AWGNQPGAGGYPGASYPGAYPGQAPPGGYPGQAP----PSAYPGPTGPSAYPGPTAPGAY 80
Query: 83 PGSVRPSQIP 92
PG P P
Sbjct: 81 PGPTAPGAFP 90
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 23/62 (37%)
Query: 73 IPGSVRPSQIPGSVRPSQIPRSVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQIPRKSK 132
PG+ P PG P P PS PG PS PG P PG P P +
Sbjct: 35 YPGASYPGAYPGQAPPGGYPGQAPPSAYPGPTGPSAYPGPTAPGAYPGPTAPGAFPGQPG 94
Query: 133 EP 134
P
Sbjct: 95 GP 96
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 21/57 (36%)
Query: 64 IPGPVRPSQIPGSVRPSQIPGSVRPSQIPRSVRPSQIPGSVRPSQIPGSVRPSQIPG 120
PG P PG P PG PS P PS PG P PG P PG
Sbjct: 35 YPGASYPGAYPGQAPPGGYPGQAPPSAYPGPTGPSAYPGPTAPGAYPGPTAPGAFPG 91
Score = 38.5 bits (88), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 21/57 (36%)
Query: 55 IPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPRSVRPSQIPGSVRPSQIPG 111
P + P PG P PG PS PG PS P P PG P PG
Sbjct: 35 YPGASYPGAYPGQAPPGGYPGQAPPSAYPGPTGPSAYPGPTAPGAYPGPTAPGAFPG 91
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 20/57 (35%)
Query: 46 IPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPRSVRPSQIPG 102
P + P P P PG PS PG PS PG P P P PG
Sbjct: 35 YPGASYPGAYPGQAPPGGYPGQAPPSAYPGPTGPSAYPGPTAPGAYPGPTAPGAFPG 91
>sp|Q6H236|PEG3_BOVIN Paternally-expressed gene 3 protein OS=Bos taurus GN=PEG3 PE=2 SV=1
Length = 2387
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q S P+Q + P+Q + P+Q P P+Q + P+Q + P+Q
Sbjct: 1505 PAQTSYPEEPAQTSYAEEPAQTSYAEEPAQTSYPEEPAQTSYTEEPAQTSYAKEPAQTSY 1564
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQIPRKSKEP 134
P+Q + P+Q + P+Q + P+Q S+EP
Sbjct: 1565 PEEPAQTSYAEEPAQTSYAEEPAQTSYAEEPAQTSY-SEEP 1604
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 43/93 (46%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q S + P+Q + P+Q + P+Q P+Q + P+Q + P+Q
Sbjct: 1352 PAQTSYTEEPAQTSYTEEPAQTSYTQEPAQTSCTEEPAQTSYTEEPAQTSYTEEPAQTSY 1411
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
+ P+Q + P+Q + P+Q + P+Q
Sbjct: 1412 TQEPAQTSYTEEPAQTSYTEEPAQTSYAQEPAQ 1444
Score = 39.7 bits (91), Expect = 0.008, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 50/118 (42%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q S + P+Q + P+Q P+Q P+Q + P+Q P+Q
Sbjct: 1514 PAQTSYAEEPAQTSYAEEPAQTSYPEEPAQTSYTEEPAQTSYAKEPAQTSYPEEPAQTSY 1573
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQIPRKSKEPKLMGREVERRKFMVRGK 151
+ P+Q + P+Q + P+Q S P+Q E + R+ + R M R +
Sbjct: 1574 AEEPAQTSYAEEPAQTSYAEEPAQTSYSEEPAQTRYTGNELRSDMRKNQLRPDMPRNQ 1631
Score = 39.7 bits (91), Expect = 0.009, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 43/93 (46%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q S + P+Q + P+Q + P+Q P+Q + P+Q + P+Q
Sbjct: 1316 PAQTSYTQEPAQTSCTEEPAQTSYTQEPAQTSCTEEPAQTSYTEEPAQTSYTEEPAQTSY 1375
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
+ P+Q + P+Q + P+Q + P+Q
Sbjct: 1376 TQEPAQTSCTEEPAQTSYTEEPAQTSYTEEPAQ 1408
Score = 39.7 bits (91), Expect = 0.010, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 43/93 (46%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q S + P+Q + P+Q + P+Q P+Q + P+Q + P+Q
Sbjct: 1388 PAQTSYTEEPAQTSYTEEPAQTSYTQEPAQTSYTEEPAQTSYTEEPAQTSYAQEPAQTSY 1447
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
+ P+Q + P+Q + P+Q + P+Q
Sbjct: 1448 AEEPAQTSYAEEPAQTSYAEEPAQTSYTQEPAQ 1480
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 43/93 (46%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q S + P+Q + P+Q + P+Q P+Q + P+Q + P+Q
Sbjct: 1334 PAQTSYTQEPAQTSCTEEPAQTSYTEEPAQTSYTEEPAQTSYTQEPAQTSCTEEPAQTSY 1393
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
+ P+Q + P+Q + P+Q + P+Q
Sbjct: 1394 TEEPAQTSYTEEPAQTSYTQEPAQTSYTEEPAQ 1426
Score = 39.3 bits (90), Expect = 0.011, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 43/93 (46%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q S + P+Q + P+Q + P+Q P+Q + P+Q + P+Q
Sbjct: 1343 PAQTSCTEEPAQTSYTEEPAQTSYTEEPAQTSYTQEPAQTSCTEEPAQTSYTEEPAQTSY 1402
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
+ P+Q + P+Q + P+Q + P+Q
Sbjct: 1403 TEEPAQTSYTQEPAQTSYTEEPAQTSYTEEPAQ 1435
Score = 39.3 bits (90), Expect = 0.012, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 43/93 (46%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q S + P+Q + P+Q + P+Q P+Q + P+Q + P+Q
Sbjct: 1280 PAQTSCTEEPAQTSYTQEPAQTSCTEEPAQTSCTEEPAQTSYTQEPAQTSCTEEPAQTSY 1339
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
+ P+Q + P+Q + P+Q + P+Q
Sbjct: 1340 TQEPAQTSCTEEPAQTSYTEEPAQTSYTEEPAQ 1372
Score = 39.3 bits (90), Expect = 0.012, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 43/93 (46%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q S + P+Q + P+Q + P+Q P+Q + P+Q + P+Q
Sbjct: 1298 PAQTSCTEEPAQTSCTEEPAQTSYTQEPAQTSCTEEPAQTSYTQEPAQTSCTEEPAQTSY 1357
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
+ P+Q + P+Q + P+Q + P+Q
Sbjct: 1358 TEEPAQTSYTEEPAQTSYTQEPAQTSCTEEPAQ 1390
Score = 38.9 bits (89), Expect = 0.013, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 43/93 (46%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q S + P+Q + P+Q + P+Q P+Q + P+Q + P+Q
Sbjct: 1361 PAQTSYTEEPAQTSYTQEPAQTSCTEEPAQTSYTEEPAQTSYTEEPAQTSYTQEPAQTSY 1420
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
+ P+Q + P+Q + P+Q + P+Q
Sbjct: 1421 TEEPAQTSYTEEPAQTSYAQEPAQTSYAEEPAQ 1453
Score = 38.9 bits (89), Expect = 0.014, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 43/93 (46%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q S + P+Q + P+Q + P+Q P+Q + P+Q + P+Q
Sbjct: 1307 PAQTSCTEEPAQTSYTQEPAQTSCTEEPAQTSYTQEPAQTSCTEEPAQTSYTEEPAQTSY 1366
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
+ P+Q + P+Q + P+Q + P+Q
Sbjct: 1367 TEEPAQTSYTQEPAQTSCTEEPAQTSYTEEPAQ 1399
Score = 38.9 bits (89), Expect = 0.014, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 43/93 (46%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q S + P+Q + P+Q + P+Q P+Q + P+Q + P+Q
Sbjct: 1370 PAQTSYTQEPAQTSCTEEPAQTSYTEEPAQTSYTEEPAQTSYTQEPAQTSYTEEPAQTSY 1429
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
+ P+Q + P+Q + P+Q + P+Q
Sbjct: 1430 TEEPAQTSYAQEPAQTSYAEEPAQTSYAEEPAQ 1462
Score = 38.9 bits (89), Expect = 0.016, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 43/93 (46%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q S + P+Q + P+Q + P+Q P+Q + P+Q + P+Q
Sbjct: 1379 PAQTSCTEEPAQTSYTEEPAQTSYTEEPAQTSYTQEPAQTSYTEEPAQTSYTEEPAQTSY 1438
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
+ P+Q + P+Q + P+Q + P+Q
Sbjct: 1439 AQEPAQTSYAEEPAQTSYAEEPAQTSYAEEPAQ 1471
Score = 38.5 bits (88), Expect = 0.022, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 43/93 (46%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q S + P+Q + P+Q + P+Q P+Q + P+Q + P+Q
Sbjct: 1289 PAQTSYTQEPAQTSCTEEPAQTSCTEEPAQTSYTQEPAQTSCTEEPAQTSYTQEPAQTSC 1348
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
+ P+Q + P+Q + P+Q + P+Q
Sbjct: 1349 TEEPAQTSYTEEPAQTSYTEEPAQTSYTQEPAQ 1381
Score = 38.1 bits (87), Expect = 0.025, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 42/93 (45%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q + + P++ + P+Q + P+Q P P+Q + P+Q + P+Q
Sbjct: 1478 PAQTNYTEEPAEASYTEEPAQTSYAEEPAQTSYPEEPAQTSYAEEPAQTSYAEEPAQTSY 1537
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
P+Q + P+Q + P+Q P+Q
Sbjct: 1538 PEEPAQTSYTEEPAQTSYAKEPAQTSYPEEPAQ 1570
Score = 38.1 bits (87), Expect = 0.027, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 43/93 (46%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q S + P+Q + P+Q + P+Q P+Q + P+Q + P+Q
Sbjct: 1325 PAQTSCTEEPAQTSYTQEPAQTSCTEEPAQTSYTEEPAQTSYTEEPAQTSYTQEPAQTSC 1384
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
+ P+Q + P+Q + P+Q + P+Q
Sbjct: 1385 TEEPAQTSYTEEPAQTSYTEEPAQTSYTQEPAQ 1417
Score = 37.7 bits (86), Expect = 0.030, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 43/93 (46%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q S + P+Q + P+Q + P+Q P+Q + P+Q + P+Q
Sbjct: 1397 PAQTSYTEEPAQTSYTQEPAQTSYTEEPAQTSYTEEPAQTSYAQEPAQTSYAEEPAQTSY 1456
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
+ P+Q + P+Q + P+Q + P++
Sbjct: 1457 AEEPAQTSYAEEPAQTSYTQEPAQTNYTEEPAE 1489
Score = 37.7 bits (86), Expect = 0.031, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 43/93 (46%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q S + P+Q + P+Q + P+Q P+Q + P+Q + P+Q
Sbjct: 1406 PAQTSYTQEPAQTSYTEEPAQTSYTEEPAQTSYAQEPAQTSYAEEPAQTSYAEEPAQTSY 1465
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
+ P+Q + P+Q + P++ + P+Q
Sbjct: 1466 AEEPAQTSYTQEPAQTNYTEEPAEASYTEEPAQ 1498
Score = 37.7 bits (86), Expect = 0.034, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 43/93 (46%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q S + P+Q + P+Q + P+Q P+Q + P+Q + P+Q
Sbjct: 1415 PAQTSYTEEPAQTSYTEEPAQTSYAQEPAQTSYAEEPAQTSYAEEPAQTSYAEEPAQTSY 1474
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
+ P+Q + P++ + P+Q + P+Q
Sbjct: 1475 TQEPAQTNYTEEPAEASYTEEPAQTSYAEEPAQ 1507
Score = 37.0 bits (84), Expect = 0.053, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 40/93 (43%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q S + P+Q P+Q + P+Q P+Q P+Q + P+Q
Sbjct: 1496 PAQTSYAEEPAQTSYPEEPAQTSYAEEPAQTSYAEEPAQTSYPEEPAQTSYTEEPAQTSY 1555
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
+ P+Q P+Q + P+Q + P+Q
Sbjct: 1556 AKEPAQTSYPEEPAQTSYAEEPAQTSYAEEPAQ 1588
Score = 37.0 bits (84), Expect = 0.058, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 42/93 (45%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q S + P+Q + P+Q + P+Q P+Q + P+Q + P+Q
Sbjct: 1424 PAQTSYTEEPAQTSYAQEPAQTSYAEEPAQTSYAEEPAQTSYAEEPAQTSYTQEPAQTNY 1483
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
+ P++ + P+Q + P+Q P+Q
Sbjct: 1484 TEEPAEASYTEEPAQTSYAEEPAQTSYPEEPAQ 1516
Score = 37.0 bits (84), Expect = 0.061, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 42/93 (45%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q S + P+Q + P+Q + P+Q P+Q + P+Q + P++
Sbjct: 1433 PAQTSYAQEPAQTSYAEEPAQTSYAEEPAQTSYAEEPAQTSYTQEPAQTNYTEEPAEASY 1492
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
+ P+Q + P+Q P+Q + P+Q
Sbjct: 1493 TEEPAQTSYAEEPAQTSYPEEPAQTSYAEEPAQ 1525
Score = 36.6 bits (83), Expect = 0.074, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 42/93 (45%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q S + P+Q + P+Q + P+Q P+Q + P++ + P+Q
Sbjct: 1442 PAQTSYAEEPAQTSYAEEPAQTSYAEEPAQTSYTQEPAQTNYTEEPAEASYTEEPAQTSY 1501
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
+ P+Q P+Q + P+Q + P+Q
Sbjct: 1502 AEEPAQTSYPEEPAQTSYAEEPAQTSYAEEPAQ 1534
Score = 36.6 bits (83), Expect = 0.081, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q S + P+Q + P+Q + P++ P+Q + P+Q P+Q
Sbjct: 1460 PAQTSYAEEPAQTSYTQEPAQTNYTEEPAEASYTEEPAQTSYAEEPAQTSYPEEPAQTSY 1519
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQIPRKSKEP 134
+ P+Q + P+Q P+Q + P+Q +KEP
Sbjct: 1520 AEEPAQTSYAEEPAQTSYPEEPAQTSYTEEPAQTSY-AKEP 1559
Score = 36.2 bits (82), Expect = 0.093, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 41/93 (44%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q S + P+Q + P++ + P+Q P+Q P+Q + P+Q
Sbjct: 1469 PAQTSYTQEPAQTNYTEEPAEASYTEEPAQTSYAEEPAQTSYPEEPAQTSYAEEPAQTSY 1528
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
+ P+Q P+Q + P+Q + P+Q
Sbjct: 1529 AEEPAQTSYPEEPAQTSYTEEPAQTSYAKEPAQ 1561
Score = 35.8 bits (81), Expect = 0.12, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 41/93 (44%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q S + P+Q + P+Q + P+Q P++ + P+Q + P+Q
Sbjct: 1451 PAQTSYAEEPAQTSYAEEPAQTSYTQEPAQTNYTEEPAEASYTEEPAQTSYAEEPAQTSY 1510
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
P+Q + P+Q + P+Q P+Q
Sbjct: 1511 PEEPAQTSYAEEPAQTSYAEEPAQTSYPEEPAQ 1543
Score = 35.8 bits (81), Expect = 0.13, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 40/93 (43%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P++ S + P+Q + P+Q P+Q P+Q + P+Q P+Q
Sbjct: 1487 PAEASYTEEPAQTSYAEEPAQTSYPEEPAQTSYAEEPAQTSYAEEPAQTSYPEEPAQTSY 1546
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
+ P+Q + P+Q P+Q + P+Q
Sbjct: 1547 TEEPAQTSYAKEPAQTSYPEEPAQTSYAEEPAQ 1579
Score = 34.3 bits (77), Expect = 0.38, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 41/93 (44%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q S + + + P+Q + P+Q P+Q + P+Q + P+Q
Sbjct: 1262 PAQTSYTDSAADTSCTEEPAQTSCTEEPAQTSYTQEPAQTSCTEEPAQTSCTEEPAQTSY 1321
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
+ P+Q + P+Q + P+Q + P+Q
Sbjct: 1322 TQEPAQTSCTEEPAQTSYTQEPAQTSCTEEPAQ 1354
Score = 33.1 bits (74), Expect = 0.83, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 40/93 (43%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
PSQ S P+Q + + + P+Q P+Q + P+Q + P+Q
Sbjct: 1253 PSQTSCIEEPAQTSYTDSAADTSCTEEPAQTSCTEEPAQTSYTQEPAQTSCTEEPAQTSC 1312
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
+ P+Q + P+Q + P+Q + P+Q
Sbjct: 1313 TEEPAQTSYTQEPAQTSCTEEPAQTSYTQEPAQ 1345
Score = 32.0 bits (71), Expect = 1.9, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 40/93 (43%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
PSQ S P+Q + ++ + P+Q P+Q + P+Q + P+Q
Sbjct: 1109 PSQTSCIEEPAQTSYTDPAAETSYTEEPAQTSYTQEPAQTSCTEEPAQTSCTEEPAQTSY 1168
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
+ P+Q + P++ + P+Q P+Q
Sbjct: 1169 TQEPAQTSYTKEPAEASYTEEPAQTSCIEEPAQ 1201
Score = 31.2 bits (69), Expect = 2.8, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 41/96 (42%)
Query: 31 SVRPSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQ 90
+V ++ S + PSQ P+Q + + P+Q + P+Q + P+Q
Sbjct: 1241 TVESAEASYTEEPSQTSCIEEPAQTSYTDSAADTSCTEEPAQTSCTEEPAQTSYTQEPAQ 1300
Query: 91 IPRSVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
+ P+Q + P+Q + P+Q + P+Q
Sbjct: 1301 TSCTEEPAQTSCTEEPAQTSYTQEPAQTSCTEEPAQ 1336
Score = 31.2 bits (69), Expect = 3.1, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 32/90 (35%)
Query: 29 GRSVRPSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRP 88
G +R +RP +RP +RP RP + +RP RP
Sbjct: 1611 GNELRSDMRKNQLRPDMPRNQLRPVMPRNQLRPDMPRNQPRPVILRNQLRPDMPRNQPRP 1670
Query: 89 SQIPRSVRPSQIPGSVRPSQIPGSVRPSQI 118
+ +RP + +RP +RP +
Sbjct: 1671 VILRNQLRPDMLGNQLRPDMPGNQLRPDML 1700
Score = 30.8 bits (68), Expect = 4.1, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 41/93 (44%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P+Q S +V P+Q + P+Q + P++ P+Q P+Q + ++
Sbjct: 965 PAQTSYAVEPAQTSYAEEPAQTSYTEAPAEASYTEEPAQTSCIEEPAQTSYTNPAAETSY 1024
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
+ P+Q + P++ + P+Q P+Q
Sbjct: 1025 AEEPAQTSYTEAPAEASYTEEPAQTSCIEEPAQ 1057
Score = 30.0 bits (66), Expect = 6.5, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
P++ S P+Q + +++ + PSQ P+Q + ++ + P+Q
Sbjct: 1082 PAEASGIEEPAQTNYTEESAEVSYTEEPSQTSCIEEPAQTSYTDPAAETSYTEEPAQTSY 1141
Query: 94 SVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQIPRKSKEP 134
+ P+Q + P+Q + P+Q + P+Q +KEP
Sbjct: 1142 TQEPAQTSCTEEPAQTSCTEEPAQTSYTQEPAQTSY-TKEP 1181
Score = 30.0 bits (66), Expect = 7.3, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 38/112 (33%), Gaps = 12/112 (10%)
Query: 34 PSQISRSVRPSQI------------PRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQ 81
P+Q S S P+Q +RP +RP +RP RP
Sbjct: 1595 PAQTSYSEEPAQTRYTGNELRSDMRKNQLRPDMPRNQLRPVMPRNQLRPDMPRNQPRPVI 1654
Query: 82 IPGSVRPSQIPRSVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQIPRKSKE 133
+ +RP RP + +RP + +RP +RP + E
Sbjct: 1655 LRNQLRPDMPRNQPRPVILRNQLRPDMLGNQLRPDMPGNQLRPDMLREPPAE 1706
Score = 29.6 bits (65), Expect = 9.5, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 41/92 (44%)
Query: 35 SQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPRS 94
+++S + PSQ P+Q + ++ P+Q + P+Q + P+Q +
Sbjct: 1101 AEVSYTEEPSQTSCIEEPAQTSYTDPAAETSYTEEPAQTSYTQEPAQTSCTEEPAQTSCT 1160
Query: 95 VRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQ 126
P+Q + P+Q + P++ + P+Q
Sbjct: 1161 EEPAQTSYTQEPAQTSYTKEPAEASYTEEPAQ 1192
>sp|Q9Y6V0|PCLO_HUMAN Protein piccolo OS=Homo sapiens GN=PCLO PE=1 SV=4
Length = 5065
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 51/88 (57%), Gaps = 7/88 (7%)
Query: 43 PSQIPRSVRP-SQIPRSVRPS-QIPGPVRPS-QIPGSVRP-SQIPGSVRPS-QIPRSVRP 97
P++ P +P SQ P S +P Q PGP +PS Q PGS +P SQ PGS +PS Q P +P
Sbjct: 436 PTKTPVQAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKP 495
Query: 98 SQIPGSVRPSQIPGSVRPSQIPGSVRPS 125
S S +P GS +P Q P +V PS
Sbjct: 496 S-AQQSTKPVSQTGSGKPLQ-PPTVSPS 521
>sp|Q86MA7|PRQFV_APLCA Protein PRQFV-amide OS=Aplysia californica PE=1 SV=1
Length = 862
Score = 37.4 bits (85), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 56/136 (41%), Gaps = 7/136 (5%)
Query: 11 NDNEWKLNGVFHKWSQNEGRSVRPSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGP-VR 69
ND+E+ L+ + Q G+ ++ S RP Q +I S RP Q G
Sbjct: 407 NDDEFDLS---KRPRQFVGKRENDDELEFSKRPRQFVGKREDDEIDFSKRPRQFVGKREN 463
Query: 70 PSQIPGSVRPSQIPGS-VRPSQIPRSVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQIP 128
+I S RP Q G +I S RP Q G +I S RP Q G +
Sbjct: 464 DGEIDFSKRPRQFVGKRENDDEIDFSKRPRQFVGKREDGEIDFSKRPRQFVGKRENNDDL 523
Query: 129 RKSKEPK-LMG-REVE 142
SK P+ +G REV+
Sbjct: 524 DFSKRPRQFVGKREVD 539
>sp|A5E866|IF2_BRASB Translation initiation factor IF-2 OS=Bradyrhizobium sp. (strain
BTAi1 / ATCC BAA-1182) GN=infB PE=3 SV=1
Length = 921
Score = 37.0 bits (84), Expect = 0.064, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 51 RPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPRSVRP 97
RP+ +P+ + P RP+Q PG RP PGS RP QI S RP
Sbjct: 184 RPATAAPQQQPAAVTAPARPAQAPG--RPQGAPGS-RPQQIGTSARP 227
>sp|Q61824|ADA12_MOUSE Disintegrin and metalloproteinase domain-containing protein 12
OS=Mus musculus GN=Adam12 PE=1 SV=2
Length = 903
Score = 35.8 bits (81), Expect = 0.14, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 7/102 (6%)
Query: 37 ISRSVRPSQIPRSVRPSQI--PRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPRS 94
ISR + +P+ P ++ P P GP RP +VR +Q P Q P
Sbjct: 796 ISRPLDARAVPQLQSPQRVLLPLHQTPRAPSGPARPLPASPAVRQAQGIRKPSPPQKPLP 855
Query: 95 VRPSQIPGSVRPSQI--PGSVRPSQIPGSVRPS---QIPRKS 131
P + + + PG P P +RP+ Q+PR S
Sbjct: 856 ADPLSRTSRLTSALVRTPGQQEPGHRPAPIRPAPKHQVPRPS 897
>sp|P47179|DAN4_YEAST Cell wall protein DAN4 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=DAN4 PE=2 SV=1
Length = 1161
Score = 34.3 bits (77), Expect = 0.37, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 50/116 (43%), Gaps = 27/116 (23%)
Query: 33 RPSQISRSVRP---SQIPRSVRP---SQIPRSVRPSQIPG------PVRPSQIPGSVRP- 79
R SQ++ S P S+ SV P SQ+ S P+ + P R SQ+ S P
Sbjct: 389 RSSQVTSSAEPTTVSEFTSSVEPTRSSQVTSSAEPTTVSEFTSSVEPTRSSQVTSSAEPT 448
Query: 80 --SQIPGSVRPSQIPRSVRPSQIPGSVRP---SQIPGSVRP---SQIPGSVRPSQI 127
S+ SV P+ R SQ+ S P S+ SV P SQ+ S P+ +
Sbjct: 449 TVSEFTSSVEPT------RSSQVTSSAEPTTVSEFTSSVEPTRSSQVTSSAEPTTV 498
Score = 32.3 bits (72), Expect = 1.3, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 30/113 (26%)
Query: 33 RPSQISRSVRP---SQIPRSVRP---SQIPRSVRPSQIPG------PVRPSQIPGSVRP- 79
R SQ++ S P S+ SV P SQ+ S P+ + P R SQ+ S P
Sbjct: 437 RSSQVTSSAEPTTVSEFTSSVEPTRSSQVTSSAEPTTVSEFTSSVEPTRSSQVTSSAEPT 496
Query: 80 --SQIPGSVRPSQIPRSVRPSQIPGSVRP---SQIPGSVRPSQIPGSVRPSQI 127
S+ SV P +R SQ+ S P S++ SV P +R SQ+
Sbjct: 497 TVSEFTSSVEP------IRSSQVTSSAEPTTVSEVTSSVEP------IRSSQV 537
>sp|P17930|VP87_NPVOP Capsid protein p87 OS=Orgyia pseudotsugata multicapsid polyhedrosis
virus GN=P87 PE=4 SV=1
Length = 624
Score = 33.5 bits (75), Expect = 0.56, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 8/67 (11%)
Query: 61 PSQIPGPVR---PSQIPGSVRPSQIPGSVRPSQIPRSVRPSQIPGSVRPSQIPGSVRPSQ 117
P Q P P++ P Q P P+Q P P+Q P+Q P P+ + + P+Q
Sbjct: 263 PPQTPAPLQDQMPPQTPAYATPAQQPSQPTPAQT-----PAQQPSQPTPAYVTSAQTPAQ 317
Query: 118 IPGSVRP 124
P P
Sbjct: 318 QPSQPTP 324
Score = 29.6 bits (65), Expect = 9.7, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 8/67 (11%)
Query: 52 PSQIPRSVR---PSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPRSVRPSQIPGSVRPSQ 108
P Q P ++ P Q P P+Q P P+Q P+Q P P+ + + P+Q
Sbjct: 263 PPQTPAPLQDQMPPQTPAYATPAQQPSQPTPAQT-----PAQQPSQPTPAYVTSAQTPAQ 317
Query: 109 IPGSVRP 115
P P
Sbjct: 318 QPSQPTP 324
>sp|A5GF86|IF2_GEOUR Translation initiation factor IF-2 OS=Geobacter uraniireducens
(strain Rf4) GN=infB PE=3 SV=1
Length = 882
Score = 33.1 bits (74), Expect = 0.77, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 45 QIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPRSVRPSQIPGSV 104
+IP ++P + P R +Q P V PS+ P RP+ PG+ RP+ RP+ G+
Sbjct: 146 EIP-GLKPKERPPVQREAQRPA-VAPSRAPE--RPAAKPGTERPASQRYPDRPAPPRGTE 201
Query: 105 RP--SQIPGSVRPSQIPGSVRP 124
RP S++P V P +P +V P
Sbjct: 202 RPSTSRVPERVTPI-VPLAVPP 222
>sp|Q05910|ADAM8_MOUSE Disintegrin and metalloproteinase domain-containing protein 8
OS=Mus musculus GN=Adam8 PE=2 SV=3
Length = 826
Score = 32.3 bits (72), Expect = 1.3, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
Query: 33 RPSQISRSVRPSQIPRSV-----RPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVR 87
RP S +V +Q PR + P P +V S +P PV +IP RP P
Sbjct: 720 RPPDPSETVSTNQPPRPIVKPKRPPPAPPGAVSSSPLPVPVYAPKIPNQFRPDP-PTKPL 778
Query: 88 PSQIPRSVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPSQIPR 129
P P+ V+P+ P + P PG+ +PG+ + + P+
Sbjct: 779 PELKPKQVKPTFAPPT--PPVKPGT--GGTVPGATQGAGEPK 816
Score = 31.6 bits (70), Expect = 2.6, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 44/103 (42%), Gaps = 14/103 (13%)
Query: 52 PSQIPR-SVRPSQIPGPVRP------SQIPGSVRPSQIPGSVRPSQIPRSV-----RPSQ 99
P QI R SV P I G P S +P RP +V +Q PR + P
Sbjct: 687 PRQIQRRSVAPKPISGLSNPLFYTRDSSLPAKNRPPDPSETVSTNQPPRPIVKPKRPPPA 746
Query: 100 IPGSVRPSQIPGSVRPSQIPGSVRPSQIPRKSKEPKLMGREVE 142
PG+V S +P V +IP RP P P+L ++V+
Sbjct: 747 PPGAVSSSPLPVPVYAPKIPNQFRPD--PPTKPLPELKPKQVK 787
>sp|Q0S219|IF2_RHOSR Translation initiation factor IF-2 OS=Rhodococcus sp. (strain RHA1)
GN=infB PE=3 SV=1
Length = 980
Score = 31.2 bits (69), Expect = 3.2, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 21/53 (39%)
Query: 70 PSQIPGSVRPSQIPGSVRPSQIPRSVRPSQIPGSVRPSQIPGSVRPSQIPGSV 122
P PG P PG P P P PG P PGS+ P PG++
Sbjct: 222 PRPAPGQGGPRPAPGQGGPRPAPGQGGPRPAPGQGGPRPSPGSMPPRPNPGAM 274
>sp|C0ZYA5|IF2_RHOE4 Translation initiation factor IF-2 OS=Rhodococcus erythropolis
(strain PR4 / NBRC 100887) GN=infB PE=3 SV=1
Length = 981
Score = 31.2 bits (69), Expect = 3.4, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 66 GPVRPSQIPGSVRPSQIPGSVRPSQIPRSVRPSQIPGSVRPSQIPGSVRPSQIPGSVRPS 125
G RP+ G RP+ G RP+ RP+ G RP G RPS PGS+ P
Sbjct: 208 GGSRPAPGQGGPRPAPGQGGPRPAPGQGGPRPAPGQGGPRPPAGQGGPRPS--PGSMPPR 265
Query: 126 QIP 128
P
Sbjct: 266 PNP 268
>sp|P15711|104K_THEPA 104 kDa microneme/rhoptry antigen OS=Theileria parva GN=TP04_0437
PE=2 SV=1
Length = 924
Score = 31.2 bits (69), Expect = 3.4, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 34 PSQISRSVRPSQIPRSVRPSQIPRSVRPSQIPGPVRPSQIPGSVRPSQIPGSVRPSQIPR 93
PS+ S S + + P S + R +PS+IP + P + + P R S+ PR
Sbjct: 534 PSKGSDSSKEGKKPGSGKKPGPAREHKPSKIPTLSKKPSGPKDPKHPRDPKEPRKSKSPR 593
Query: 94 SVRPSQIPGSVRP--SQIP 110
+ P++ P P S++P
Sbjct: 594 TASPTRRPSPKLPQLSKLP 612
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,380,499
Number of Sequences: 539616
Number of extensions: 2644961
Number of successful extensions: 12198
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 435
Number of HSP's that attempted gapping in prelim test: 9663
Number of HSP's gapped (non-prelim): 1990
length of query: 166
length of database: 191,569,459
effective HSP length: 109
effective length of query: 57
effective length of database: 132,751,315
effective search space: 7566824955
effective search space used: 7566824955
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)