RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy689
(162 letters)
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 101 bits (253), Expect = 1e-28
Identities = 111/135 (82%), Positives = 128/135 (94%)
Query: 23 GLLAILKKLRSSPEKELRILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQSEGF 82
GLL+IL+KL+S+P++E+RILLLGLDNAGKTT+LK LASEDISHITPTQGFNIKSVQS+GF
Sbjct: 1 GLLSILRKLKSAPDQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGF 60
Query: 83 KLNVWDIGGQRKIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPL 142
KLNVWDIGGQRKIRPYWR+YF+NTDILIYVIDSAD KRFEE+G EL ELL +EKL+ VP+
Sbjct: 61 KLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPV 120
Query: 143 LVYANKQDLLGAAPA 157
L++ANKQDLL AAPA
Sbjct: 121 LIFANKQDLLTAAPA 135
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 96.7 bits (240), Expect = 4e-26
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 13/127 (10%)
Query: 36 EKELRILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQRKI 95
R+LLLG +GK+TI+K + I H+ T G Q + +++D+GGQR
Sbjct: 4 RATHRLLLLGAGESGKSTIVKQMR---ILHVVLTSGIFETKFQVDKVNFHMFDVGGQRDE 60
Query: 96 RPYWRNYFDNTDILIYVIDSA----------DVKRFEESGFELHELLSDEKLTGVPLLVY 145
R W F++ +I+V+ S+ R +E+ + ++ L + ++++
Sbjct: 61 RRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILF 120
Query: 146 ANKQDLL 152
NKQDLL
Sbjct: 121 LNKQDLL 127
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 83.9 bits (206), Expect = 1e-21
Identities = 63/125 (50%), Positives = 83/125 (66%), Gaps = 1/125 (0%)
Query: 27 ILKKLRSSPEKELRILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQSEGFKLNV 86
+ KL S KELRIL+LGLD AGKTTIL L ++ PT GFN++++ + KLNV
Sbjct: 7 MFDKLWGS-NKELRILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVETLSYKNLKLNV 65
Query: 87 WDIGGQRKIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYA 146
WD+GGQ IRPYWR Y+ +T +I+V+DS D R + ELH +L +E+L LLV+A
Sbjct: 66 WDLGGQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFA 125
Query: 147 NKQDL 151
NKQD
Sbjct: 126 NKQDQ 130
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 79.9 bits (196), Expect = 6e-20
Identities = 30/126 (23%), Positives = 57/126 (45%), Gaps = 12/126 (9%)
Query: 37 KELRILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQRKIR 96
+ ++ILLLG +GK+T LK + I PT+G + + + + D+GGQR R
Sbjct: 1 RLVKILLLGAGESGKSTFLKQM--RIIHGQDPTKGIHEYDFEIKNVPFKMVDVGGQRSER 58
Query: 97 PYWRNY----------FDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYA 146
W +++ +++ R ES ++++ + V ++++
Sbjct: 59 KRWFECFDSVTSILFLVSSSEFDQVLMEDRQTNRLTESLNIFETIVNNRVFSNVSIILFL 118
Query: 147 NKQDLL 152
NK DLL
Sbjct: 119 NKTDLL 124
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 78.9 bits (193), Expect = 7e-20
Identities = 71/120 (59%), Positives = 94/120 (78%)
Query: 37 KELRILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQRKIR 96
+ELR+L+LGLDNAGKTTILK ED+ I+PT GFNIK+++ GFKLN+WD+GGQ+ +R
Sbjct: 1 RELRLLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLR 60
Query: 97 PYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQDLLGAAP 156
YWRNYF++TD LI+V+DSAD +R ++ EL LL +E+L G LL++ANKQDL GA
Sbjct: 61 SYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALS 120
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 78.5 bits (192), Expect = 1e-19
Identities = 60/125 (48%), Positives = 84/125 (67%), Gaps = 2/125 (1%)
Query: 27 ILKKLRSSPEKELRILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQSEGFKLNV 86
+L K+ + KE+RIL+LGLD AGKTTIL L PT GFN+++V + K NV
Sbjct: 3 VLSKIFGN--KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNV 60
Query: 87 WDIGGQRKIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYA 146
WD+GGQ KIRP WR+Y+ T LI+V+D AD R +E+ ELH +++D ++ +L++A
Sbjct: 61 WDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFA 120
Query: 147 NKQDL 151
NKQDL
Sbjct: 121 NKQDL 125
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 77.7 bits (190), Expect = 4e-19
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 11/126 (8%)
Query: 37 KELRILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQRKIR 96
+EL++LLLG +GK+T +K + S + PT G + + D+GGQR R
Sbjct: 1 RELKLLLLGTGESGKSTFIKQMRIIHGSGV-PTTGIIEYPFDLQSVIFRMVDVGGQRSER 59
Query: 97 PYWRNYFDNTDILIYVIDSADVKR----------FEESGFELHELLSDEKLTGVPLLVYA 146
W + F+N +++++ ++ + EES +++ ++++
Sbjct: 60 RKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFL 119
Query: 147 NKQDLL 152
NK+DLL
Sbjct: 120 NKKDLL 125
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 75.4 bits (184), Expect = 4e-18
Identities = 25/124 (20%), Positives = 51/124 (41%), Gaps = 7/124 (5%)
Query: 41 ILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQSEGFKLNVWDI----GGQRKIR 96
+L +GL ++GKT + L + + + + + N + G +
Sbjct: 3 VLFVGLCDSGKTLLFVRLLTGQYRDTQTSITDSSAIYKVNNNRGNSLTLIDLPGHESLRF 62
Query: 97 PYWRNYFDNTDILIYVIDSADVKRF-EESGFELHELLSDEKLT--GVPLLVYANKQDLLG 153
+ + +++V+DSA +R ++ L+++L D LL+ NKQD+
Sbjct: 63 QLLDRFKSSARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNSPSLLIACNKQDIAM 122
Query: 154 AAPA 157
A A
Sbjct: 123 AKSA 126
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 75.0 bits (183), Expect = 6e-18
Identities = 29/126 (23%), Positives = 56/126 (44%), Gaps = 14/126 (11%)
Query: 37 KELRILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQRKIR 96
+E+++LLLG +GK+TI+K + G + ++D+GGQR R
Sbjct: 1 REVKLLLLGAGESGKSTIVKQMKIIH----EAGTGIVETHFTFKDLHFKMFDVGGQRSER 56
Query: 97 PYWRNYFDNTDILIYVIDSADV----------KRFEESGFELHELLSDEKLTGVPLLVYA 146
W + F+ +I+ + +D R ES + +++ T ++++
Sbjct: 57 KKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFL 116
Query: 147 NKQDLL 152
NK+DL
Sbjct: 117 NKKDLF 122
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 73.9 bits (180), Expect = 7e-18
Identities = 59/116 (50%), Positives = 80/116 (68%)
Query: 39 LRILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQRKIRPY 98
+RIL++GLD AGKTTIL L +I PT GFN+++V+ + VWD+GGQ KIRP
Sbjct: 1 MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPL 60
Query: 99 WRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQDLLGA 154
WR+YF NT LI+V+DS D +R E+ EL +L++++L LLV+ANKQDL A
Sbjct: 61 WRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNA 116
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 73.2 bits (178), Expect = 1e-17
Identities = 39/115 (33%), Positives = 68/115 (59%)
Query: 40 RILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQRKIRPYW 99
++L LGLDNAGKTT+L L ++ ++ + PT + + K +D+GG + R W
Sbjct: 2 KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHIQARRLW 61
Query: 100 RNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQDLLGA 154
++YF + +++++D+AD +RF+E+ EL L + +L VP ++ NK D A
Sbjct: 62 KDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNA 116
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 73.6 bits (179), Expect = 2e-17
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
Query: 26 AILKKLRSSPEKELRILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQSEGFKLN 85
++L+ L +K +++ LGLDNAGKTT+L L + + PT + + G
Sbjct: 2 SVLQFLGLY-KKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFT 60
Query: 86 VWDIGGQRKIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVY 145
+D+GG + R W+NY + +++++D AD +R ES EL L++DE + VP+L+
Sbjct: 61 TFDLGGHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILIL 120
Query: 146 ANKQDLLGAAP 156
NK D A
Sbjct: 121 GNKIDRPEAIS 131
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 72.9 bits (178), Expect = 2e-17
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Query: 39 LRILLLGLDNAGKTTILKTLASED-ISHITPTQGFNIKS----VQSEGFKLNVWDIGGQR 93
++ILL+G GK+ +L + T G + K + + KL +WD GQ
Sbjct: 3 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQE 62
Query: 94 KIRPYWRNYFDNTDILIYVIDSADVKRFEE 123
+ R Y+ +I V D D + F
Sbjct: 63 RFRTITTAYYRGAMGIILVYDITDERTFTN 92
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 72.1 bits (176), Expect = 3e-17
Identities = 23/116 (19%), Positives = 46/116 (39%), Gaps = 5/116 (4%)
Query: 39 LRILLLGLDNAGKTTILKTLASE---DISHITPTQGFNIKSVQSEG--FKLNVWDIGGQR 93
++LL+G GKT +L + + T F I++++ +G KL +WD GQ
Sbjct: 7 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 66
Query: 94 KIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQ 149
+ R Y+ ++ V D + K F+ + + +++
Sbjct: 67 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 122
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 72.3 bits (176), Expect = 4e-17
Identities = 48/131 (36%), Positives = 80/131 (61%), Gaps = 2/131 (1%)
Query: 24 LLAILKKLRSSPEKELRILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQSEGFK 83
L + +L + +E +++++GLDNAGKTTIL + ++ H +PT G N++ + +
Sbjct: 3 LFTRIWRLFNH--QEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTR 60
Query: 84 LNVWDIGGQRKIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLL 143
+WDIGGQ +R W Y+ NT+ +I V+DS D +R + EL+++L+ E L LL
Sbjct: 61 FLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLL 120
Query: 144 VYANKQDLLGA 154
++ANKQD+
Sbjct: 121 IFANKQDVKEC 131
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 67.0 bits (162), Expect = 3e-15
Identities = 46/119 (38%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Query: 37 KELRILLLGLDNAGKTTILKTLASEDIS-HITPTQGFNIKSVQSEGFKLNVWDIGGQRKI 95
+E+ + L+GL +GKTT + +AS + + PT GFN++ + + +WDIGGQ +
Sbjct: 1 EEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRF 60
Query: 96 RPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQDLLGA 154
R W Y ++Y++D+AD ++ E S ELH LL +L G+P+LV NK+DL GA
Sbjct: 61 RSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGA 119
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 65.0 bits (157), Expect = 3e-14
Identities = 26/126 (20%), Positives = 53/126 (42%), Gaps = 9/126 (7%)
Query: 40 RILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQRKIRPYW 99
I++ G N+GKT++L L ++ + +Q + + +G + + D G K+R
Sbjct: 5 SIIIAGPQNSGKTSLLTLLTTDSVRPTVVSQE-PLSAADYDGSGVTLVDFPGHVKLRYKL 63
Query: 100 RNYF-----DNTDILIYVIDSADVKRFEESGFELHEL---LSDEKLTGVPLLVYANKQDL 151
+Y ++ V + D K+ + L ++ G+ +L+ NK +L
Sbjct: 64 SDYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCENGIDILIACNKSEL 123
Query: 152 LGAAPA 157
A P
Sbjct: 124 FTARPP 129
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 64.9 bits (157), Expect = 3e-14
Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
Query: 39 LRILLLGLDNAGKTTILKTLASED-ISHITPTQGFNIKS----VQSEGFKLNVWDIGGQR 93
++LL+G GK+ +L + + + T G + K + + KL +WD GQ
Sbjct: 7 FKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQE 66
Query: 94 KIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANK 148
+ R +Y+ + +I V D + + + + V L+ NK
Sbjct: 67 RFRTITSSYYRGSHGIIIVYD-VTDQESFNGVKMWLQEIDRYATSTVLKLLVGNK 120
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 64.5 bits (156), Expect = 4e-14
Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 5/99 (5%)
Query: 36 EKELRILLLGLDNAGKTTILKTLA-----SEDISHITPTQGFNIKSVQSEGFKLNVWDIG 90
L+IL++G GK+++L E + I SV KL +WD
Sbjct: 5 LTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTA 64
Query: 91 GQRKIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELH 129
GQ + R +Y+ +I V D F + L+
Sbjct: 65 GQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLN 103
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 63.0 bits (152), Expect = 1e-13
Identities = 20/96 (20%), Positives = 37/96 (38%), Gaps = 5/96 (5%)
Query: 39 LRILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQS-----EGFKLNVWDIGGQR 93
+IL++G + GKT+ L A + + + V++ + KL +WD GQ
Sbjct: 6 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQE 65
Query: 94 KIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELH 129
+ R Y+ I + D + + F
Sbjct: 66 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWST 101
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 60.9 bits (146), Expect = 6e-13
Identities = 59/118 (50%), Positives = 78/118 (66%)
Query: 37 KELRILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQRKIR 96
+E+RIL+LGLD AGKTTIL L ++ PT GFN+++V + K VWD+GG IR
Sbjct: 4 REMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGLTSIR 63
Query: 97 PYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQDLLGA 154
PYWR Y+ NTD +IYV+DS D R S EL +L +E+L L+V+ANKQD+ A
Sbjct: 64 PYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQA 121
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 60.6 bits (146), Expect = 9e-13
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 5/117 (4%)
Query: 39 LRILLLGLDNAGKTTILKTLAS---EDISHITPTQGFNIKSVQSEG--FKLNVWDIGGQR 93
+I+L+G GKT +++ T F IK+V+ G KL +WD GQ
Sbjct: 6 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQE 65
Query: 94 KIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQD 150
+ R ++Y+ + + LI D + F L E+ + +LV
Sbjct: 66 RFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDL 122
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 59.9 bits (144), Expect = 2e-12
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 39 LRILLLGLDNAGKTTILKTLA-----SEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQR 93
+ L++G GK+ +L + I G I +V + KL +WD GQ
Sbjct: 6 FKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQE 65
Query: 94 KIRPYWRNYFDNTDILIYVIDSADVKRFEE 123
+ R R+Y+ + V D + +
Sbjct: 66 RFRSVTRSYYRGAAGALLVYDITSRETYNA 95
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 58.7 bits (141), Expect = 4e-12
Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 6/117 (5%)
Query: 39 LRILLLGLDNAGKTTILKTLA-----SEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQR 93
+++L+G GK+ +L E S I V + K +WD GQ
Sbjct: 5 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 64
Query: 94 KIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQD 150
+ R Y+ + V D A +E L EL D + + +++ NK D
Sbjct: 65 RYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELR-DHADSNIVIMLVGNKSD 120
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 56.1 bits (134), Expect = 4e-11
Identities = 19/119 (15%), Positives = 43/119 (36%), Gaps = 4/119 (3%)
Query: 37 KELRILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQS----EGFKLNVWDIGGQ 92
+E ++++LG GK+ + + + + L + D G
Sbjct: 2 REYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGT 61
Query: 93 RKIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQDL 151
+ Y N I V + + F++ +++ ++ VP+++ NK DL
Sbjct: 62 EQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDL 120
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 56.0 bits (134), Expect = 4e-11
Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 6/89 (6%)
Query: 39 LRILLLGLDNAGKTTILKTLASED------ISHITPTQGFNIKSVQSEGFKLNVWDIGGQ 92
+++L+G GKT +L IS + + V KL +WD GQ
Sbjct: 7 FKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQ 66
Query: 93 RKIRPYWRNYFDNTDILIYVIDSADVKRF 121
+ R Y+ + L+ + D + F
Sbjct: 67 ERFRSVTHAYYRDAHALLLLYDVTNKASF 95
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 55.4 bits (132), Expect = 6e-11
Identities = 23/121 (19%), Positives = 49/121 (40%), Gaps = 6/121 (4%)
Query: 37 KELRILLLGLDNAGKTTILKTLAS-EDISHITPTQGFNIKS----VQSEGFKLNV-WDIG 90
+ +I+++G N GKT + + T G + + + E K+ + G
Sbjct: 1 RIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAG 60
Query: 91 GQRKIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQD 150
+R + ++Y+ N +++V D ++ F + E +P ++ NK D
Sbjct: 61 QERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCD 120
Query: 151 L 151
L
Sbjct: 121 L 121
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 54.9 bits (131), Expect = 1e-10
Identities = 26/128 (20%), Positives = 46/128 (35%), Gaps = 15/128 (11%)
Query: 39 LRILLLGLDNAGKTTILKTLAS-EDISHITPTQG--------------FNIKSVQSEGFK 83
+++L LG GKTT L + T G N S ++
Sbjct: 6 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 65
Query: 84 LNVWDIGGQRKIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLL 143
L +WD GQ + R +F + + + D + F + +L ++ ++
Sbjct: 66 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 125
Query: 144 VYANKQDL 151
+ NK DL
Sbjct: 126 LIGNKADL 133
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 52.6 bits (125), Expect = 9e-10
Identities = 22/117 (18%), Positives = 41/117 (35%), Gaps = 6/117 (5%)
Query: 39 LRILLLGLDNAGKTTILKTLA-----SEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQR 93
+ +++G GK+ +L ++ I G I V + KL +WD GQ
Sbjct: 5 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQE 64
Query: 94 KIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQD 150
+ R R+Y+ + V D + + +++ NK D
Sbjct: 65 RFRAVTRSYYRGAAGALMVYDITRRSTYNHL-SSWLTDARNLTNPNTVIILIGNKAD 120
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 52.2 bits (124), Expect = 1e-09
Identities = 22/117 (18%), Positives = 43/117 (36%), Gaps = 6/117 (5%)
Query: 39 LRILLLGLDNAGKTTILKTLA-----SEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQR 93
+ +++G GK+ +L I G + ++ + KL +WD GQ
Sbjct: 4 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQE 63
Query: 94 KIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQD 150
R R+Y+ + V D + F L + + + +++ NK D
Sbjct: 64 SFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSS-SNMVIMLIGNKSD 119
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 51.5 bits (122), Expect = 2e-09
Identities = 18/96 (18%), Positives = 40/96 (41%), Gaps = 5/96 (5%)
Query: 39 LRILLLGLDNAGKTTILKTLA-----SEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQR 93
+++LLG GKT+++ + I+ + + ++ + L +WD GQ
Sbjct: 4 FKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQE 63
Query: 94 KIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELH 129
+ Y+ +++ I V D D F++ +
Sbjct: 64 RFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVK 99
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 49.2 bits (116), Expect = 2e-08
Identities = 20/118 (16%), Positives = 43/118 (36%), Gaps = 4/118 (3%)
Query: 37 KELRILLLGLDNAGKTTILKTLA----SEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQ 92
E +++++G GK+ + L ++ + E L++ D GQ
Sbjct: 2 TEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQ 61
Query: 93 RKIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQD 150
+ Y + + V + K FE+ ++ + VP+++ NK D
Sbjct: 62 EEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCD 119
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 48.9 bits (115), Expect = 2e-08
Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 6/117 (5%)
Query: 39 LRILLLGLDNAGKTTILKTLASED-----ISHITPTQGFNIKSVQSEGFKLNVWDIGGQR 93
++++LLG GK++I+ S D I ++ K +WD GQ
Sbjct: 4 IKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQE 63
Query: 94 KIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQD 150
+ Y+ N + V D + F ++ + E L ++ + + + NK D
Sbjct: 64 RFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKE-LHEQASKDIIIALVGNKID 119
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 47.6 bits (112), Expect = 6e-08
Identities = 21/121 (17%), Positives = 43/121 (35%), Gaps = 8/121 (6%)
Query: 39 LRILLLGLDNAGKTTILKTLAS-----EDISHITPTQGFNIKSVQSEGFKLNVWDIGGQR 93
+++LLG GK++++ + + I V + +WD GQ
Sbjct: 7 FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQE 66
Query: 94 KIRPYWRNYFDNTDILI---YVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQD 150
+ R ++ +D + V DS + E ++ P ++ NK D
Sbjct: 67 RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKID 126
Query: 151 L 151
+
Sbjct: 127 I 127
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 47.3 bits (111), Expect = 7e-08
Identities = 23/117 (19%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 40 RILLLGLDNAGKTTILKTLA-----SEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQRK 94
+++ LG + GKT+++ + + I ++ +L +WD GQ +
Sbjct: 2 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQER 61
Query: 95 IRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQDL 151
R +Y ++ + V D +V F+++ + ++ + E+ + V +++ NK DL
Sbjct: 62 FRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRT-ERGSDVIIMLVGNKTDL 117
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 46.9 bits (110), Expect = 1e-07
Identities = 19/120 (15%), Positives = 39/120 (32%), Gaps = 5/120 (4%)
Query: 36 EKELRILLLGLDNAGKTTILKTLA----SEDISHITPTQGFNIKSVQSEGFKLNVWDIGG 91
+ ++ +++G GKT +L + + V + L +WD G
Sbjct: 3 PQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 62
Query: 92 QRKIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQDL 151
Q + TD+ + FE + + + P+++ K DL
Sbjct: 63 QEDYDRLRPLSYPQTDVSLICFSLVSPASFENVRAKWYPEV-RHHCPNTPIILVGTKLDL 121
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 47.0 bits (110), Expect = 1e-07
Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 4/118 (3%)
Query: 38 ELRILLLGLDNAGKTTILKTLA----SEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQR 93
+++++G GK+ + D + ++ L+V D GQ
Sbjct: 4 TYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQE 63
Query: 94 KIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQDL 151
+ Y D + V D FE +L + P+++ ANK DL
Sbjct: 64 EFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDL 121
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 46.5 bits (109), Expect = 1e-07
Identities = 22/116 (18%), Positives = 46/116 (39%), Gaps = 4/116 (3%)
Query: 40 RILLLGLDNAGKTTILKTLA----SEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQRKI 95
+++++G GK+ + ED + E ++++ D GQ
Sbjct: 6 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDY 65
Query: 96 RPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQDL 151
NYF + + + V +++ F + ++L ++ VP L+ NK DL
Sbjct: 66 AAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDL 121
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 46.5 bits (109), Expect = 1e-07
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 13/92 (14%)
Query: 39 LRILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKS----VQSEGFKLNVWDIGGQRK 94
LR++++G N GK+T+L L +ED + +T G + G + D G R
Sbjct: 1 LRMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRS 60
Query: 95 IRPYWRNYF---------DNTDILIYVIDSAD 117
+ DI+++V+D++
Sbjct: 61 ETNDLVERLGIERTLQEIEKADIVLFVLDASS 92
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 46.2 bits (108), Expect = 1e-07
Identities = 16/90 (17%), Positives = 36/90 (40%), Gaps = 5/90 (5%)
Query: 39 LRILLLGLDNAGKTTILKTLA-----SEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQR 93
++++++G GK+++++ + I V E +L +WD GQ
Sbjct: 3 IKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQE 62
Query: 94 KIRPYWRNYFDNTDILIYVIDSADVKRFEE 123
+ + Y+ + V + D + FE
Sbjct: 63 EFDAITKAYYRGAQACVLVFSTTDRESFEA 92
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 46.2 bits (108), Expect = 2e-07
Identities = 17/95 (17%), Positives = 32/95 (33%), Gaps = 5/95 (5%)
Query: 34 SPEKELRILLLGLDNAGKTTILKTLA-----SEDISHITPTQGFNIKSVQSEGFKLNVWD 88
+ + +++LLG GK++++ S I + K +WD
Sbjct: 2 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWD 61
Query: 89 IGGQRKIRPYWRNYFDNTDILIYVIDSADVKRFEE 123
GQ + Y+ I V D + + F
Sbjct: 62 TAGQERYHSLAPMYYRGAQAAIVVYDITNEESFAR 96
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 45.8 bits (107), Expect = 3e-07
Identities = 24/121 (19%), Positives = 44/121 (36%), Gaps = 4/121 (3%)
Query: 35 PEKELRILLLGLDNAGKTTILKTLA----SEDISHITPTQGFNIKSVQSEGFKLNVWDIG 90
P + +++++G GK+ + D I SV +L++ D
Sbjct: 3 PSETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTA 62
Query: 91 GQRKIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQD 150
GQ + Y + V D + F E G ++L + P+++ NK D
Sbjct: 63 GQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKAD 122
Query: 151 L 151
L
Sbjct: 123 L 123
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 45.1 bits (105), Expect = 6e-07
Identities = 19/99 (19%), Positives = 37/99 (37%), Gaps = 5/99 (5%)
Query: 39 LRILLLGLDNAGKTTILKTLAS-EDISHITPTQG----FNIKSVQSEGFKLNVWDIGGQR 93
L++++LG GKT+++ + + + T G V + +WD GQ
Sbjct: 3 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 62
Query: 94 KIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELL 132
+ + ++ D + V D F+ E L
Sbjct: 63 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL 101
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 44.7 bits (104), Expect = 6e-07
Identities = 18/91 (19%), Positives = 36/91 (39%), Gaps = 6/91 (6%)
Query: 39 LRILLLGLDNAGKTTILKTLAS-EDISHITPTQG-----FNIKSVQSEGFKLNVWDIGGQ 92
L++++LG GKT+++ + + T G + + + VWD GQ
Sbjct: 3 LKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQ 62
Query: 93 RKIRPYWRNYFDNTDILIYVIDSADVKRFEE 123
+ + ++ D + V D + FE
Sbjct: 63 ERFQSLGVAFYRGADCCVLVYDVTNASSFEN 93
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 45.2 bits (106), Expect = 8e-07
Identities = 19/143 (13%), Positives = 49/143 (34%), Gaps = 15/143 (10%)
Query: 24 LLAILKKLRSSPEKELRILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQSEG-- 81
LL +L L+ L IL++G GK++ + ++ E + I+P Q + V
Sbjct: 18 LLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSR 77
Query: 82 -------------FKLNVWDIGGQRKIRPYWRNYFDNTDILIYVIDSADVKRFEESGFEL 128
+ + I+ + + + + + +D+ V ++ +
Sbjct: 78 AGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKA 137
Query: 129 HELLSDEKLTGVPLLVYANKQDL 151
+ + ++ + Q
Sbjct: 138 ITDSFGKGIWNKAIVALTHAQFS 160
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 43.5 bits (101), Expect = 2e-06
Identities = 22/99 (22%), Positives = 36/99 (36%), Gaps = 5/99 (5%)
Query: 37 KELRILLLGLDNAGKTTILKTLA-----SEDISHITPTQGFNIKSVQSEGFKLNVWDIGG 91
+EL++ LLG GK++I+ I + Q+E K +WD G
Sbjct: 3 RELKVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAG 62
Query: 92 QRKIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHE 130
+ R Y+ + I V D + F + E
Sbjct: 63 LERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRE 101
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 43.1 bits (100), Expect = 3e-06
Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 6/124 (4%)
Query: 33 SSPEKEL-RILLLGLDNAGKTTILKTLASE--DISHITPTQGFNIKSVQSEGFKLNVW-- 87
P + + +++G GKT +L + A++ ++ SV G + +
Sbjct: 3 HGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLY 62
Query: 88 DIGGQRKIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYAN 147
D GQ + TD+ + S ++ E E VP L+
Sbjct: 63 DTAGQEDYDRLRPLSYPMTDV-FLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGT 121
Query: 148 KQDL 151
+ DL
Sbjct: 122 QIDL 125
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 43.1 bits (100), Expect = 3e-06
Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 5/119 (4%)
Query: 37 KELRILLLGLDNAGKTTILKTLASED-ISHITPTQGFNIK---SVQSEGFKLNVWDIGGQ 92
+ ++ +++G GKT +L + + S PT N + E + L ++D GQ
Sbjct: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61
Query: 93 RKIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQDL 151
+ TD+ V S E+ E P L+ + DL
Sbjct: 62 EDYDRLRPLSYPQTDV-FLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDL 119
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 42.7 bits (99), Expect = 4e-06
Identities = 20/118 (16%), Positives = 37/118 (31%), Gaps = 4/118 (3%)
Query: 37 KELRILLLGLDNAGKTTILKTLA----SEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQ 92
+E ++++LG GK+ + E V + L + D G
Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGT 61
Query: 93 RKIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQD 150
+ Y N V F + ++L + VP+++ NK D
Sbjct: 62 EQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCD 119
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 42.0 bits (97), Expect = 6e-06
Identities = 19/117 (16%), Positives = 42/117 (35%), Gaps = 5/117 (4%)
Query: 39 LRILLLGLDNAGKTTILKTLA----SEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQRK 94
+I+++G GKT +L A E+ + ++ +L++WD G
Sbjct: 3 CKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPY 62
Query: 95 IRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQDL 151
+ ++D ++ D + + + + E +L+ K DL
Sbjct: 63 YDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKG-EIQEFCPNTKMLLVGCKSDL 118
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 41.7 bits (97), Expect = 1e-05
Identities = 22/154 (14%), Positives = 45/154 (29%), Gaps = 11/154 (7%)
Query: 5 QNSYERMEKENQVKDLALGLLAILKKLRSSPEKELRILLLGLDNAGKTTILKTLASEDI- 63
Q +E + ++ L AI L+ L + + G +GK++ + TL
Sbjct: 23 QEILNLIELRMRAGNIQLTNSAISDALKEIDSSVLNVAVTGETGSGKSSFINTLRGIGNE 82
Query: 64 ------SHITPTQGFNIKSVQSEGFKLNVWDIGGQRKIRPYWRNYFDNTDILIYVIDSAD 117
+ + + WD+ G Y + Y
Sbjct: 83 EEGAAKTGVVEVTMERHPYKHPNIPNVVFWDLPGIGSTNFPPDTYLEKMKFYEYDFFIII 142
Query: 118 VK-RFEESGFELHELLSDEKLTGVPLLVYANKQD 150
RF+++ ++ + +S K D
Sbjct: 143 SATRFKKNDIDIAKAISM---MKKEFYFVRTKVD 173
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 40.0 bits (92), Expect = 3e-05
Identities = 21/116 (18%), Positives = 43/116 (37%), Gaps = 5/116 (4%)
Query: 39 LRILLLGLDNAGKTTILKTLASED-ISHITPTQGFN---IKSVQSEGFKLNVWDIGGQRK 94
+++++G GKT +L + + PT N V + +L +WD G
Sbjct: 3 KKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGLED 62
Query: 95 IRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQD 150
+ +TD+++ E + + VP+++ NK+D
Sbjct: 63 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKD 117
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 38.9 bits (89), Expect = 9e-05
Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Query: 33 SSPE--KELRILLLGLDNAGKTTILKTLASEDISHITPTQGFNI----KSVQSEGFKLNV 86
S PE +++ ++G N GK+T+ + +++ + ++P G V +G K
Sbjct: 1 SKPEITDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVF 60
Query: 87 WDIGGQRKIRP--YWRNYFDNTDILIYVIDSADV 118
D G R+ + ++ I+ ADV
Sbjct: 61 VDTAGLRRKSRVEPRTVEKYSNYRVVDSIEKADV 94
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 37.7 bits (86), Expect = 2e-04
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 7/117 (5%)
Query: 40 RILLLGLDNAGKTTILKTLASED-----ISHITPTQGFNIKSVQSEGFKLNVWDIGGQRK 94
+++L+G GKTT +K + + ++ + + K NVWD GQ K
Sbjct: 5 KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEK 64
Query: 95 IRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQDL 151
Y+ I + D ++ +L+ + +P+++ NK D+
Sbjct: 65 FGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE--NIPIVLCGNKVDI 119
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 37.7 bits (86), Expect = 2e-04
Identities = 18/119 (15%), Positives = 44/119 (36%), Gaps = 2/119 (1%)
Query: 32 RSSPEKELRILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQSEGFKLNVWDIGG 91
RS PE LR+ +LG +GK++++ + + T+ K + ++ I
Sbjct: 1 RSIPE--LRLGVLGDARSGKSSLIHRFLTGSYQVLEKTESEQYKKEMLVDGQTHLVLIRE 58
Query: 92 QRKIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQD 150
+ + + + I ++ ++ + + L E G+ L + +
Sbjct: 59 EAGAPDAKFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQDR 117
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 37.8 bits (86), Expect = 2e-04
Identities = 11/70 (15%), Positives = 27/70 (38%)
Query: 39 LRILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQRKIRPY 98
+++++ G NAGK+++L LA + + +T G ++ +
Sbjct: 2 MKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRE 61
Query: 99 WRNYFDNTDI 108
+ + I
Sbjct: 62 ASDEVERIGI 71
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 36.9 bits (84), Expect = 4e-04
Identities = 22/122 (18%), Positives = 44/122 (36%), Gaps = 4/122 (3%)
Query: 34 SPEKELRILLLGLDNAGKTTILKTLA----SEDISHITPTQGFNIKSVQSEGFKLNVWDI 89
S +++ R++++G GK+ + D + +L++ D
Sbjct: 1 SMQEKYRLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDT 60
Query: 90 GGQRKIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQ 149
GQ + Y + + V D FEE ++L + P+++ NK
Sbjct: 61 AGQEEFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKA 120
Query: 150 DL 151
DL
Sbjct: 121 DL 122
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain
{Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 36.9 bits (84), Expect = 4e-04
Identities = 31/124 (25%), Positives = 47/124 (37%), Gaps = 11/124 (8%)
Query: 40 RILLLGLDNAGKTTILKTLASEDI---SHITPTQGFNIK-SVQSEGFKLNVWDIGGQRKI 95
+ L+G NAGK+++L + + T N+ SE + + DI G +
Sbjct: 3 DVGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSEEERFTLADIPGIIEG 62
Query: 96 RPYWRNYF-------DNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANK 148
+ T +L+YV+D+AD D L P LV NK
Sbjct: 63 ASEGKGLGLEFLRHIARTRVLLYVLDAADEPLKTLETLRKEVGAYDPALLRRPSLVALNK 122
Query: 149 QDLL 152
DLL
Sbjct: 123 VDLL 126
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 37.0 bits (84), Expect = 4e-04
Identities = 18/96 (18%), Positives = 37/96 (38%), Gaps = 13/96 (13%)
Query: 41 ILLLGLDNAGKTTILKTLASEDI---SHITPTQGFNIKSVQSEGFKLNVWDIGG------ 91
I ++G N GK+T+L L + I S T I + +EG ++
Sbjct: 8 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEE 67
Query: 92 ----QRKIRPYWRNYFDNTDILIYVIDSADVKRFEE 123
R + + + +++I+V++ +E
Sbjct: 68 KRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDE 103
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 36.6 bits (83), Expect = 4e-04
Identities = 24/119 (20%), Positives = 48/119 (40%), Gaps = 4/119 (3%)
Query: 37 KELRILLLGLDNAGKTTILKTLA----SEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQ 92
K +I +LG + GK+++ + + +V + + L + D GQ
Sbjct: 3 KSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQ 62
Query: 93 RKIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQDL 151
+ + + Y + + I V +K FE +LL +P+++ NK+DL
Sbjct: 63 DEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDL 121
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 36.6 bits (83), Expect = 4e-04
Identities = 7/63 (11%), Positives = 16/63 (25%)
Query: 40 RILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQRKIRPYW 99
++LLLG GK+ + + + G + + +
Sbjct: 3 KVLLLGAPGVGKSALARIFGGVEDGPEAEAAGHTYDRSIVVDGEEASLMVYDIWEQDGGR 62
Query: 100 RNY 102
Sbjct: 63 WLP 65
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 36.2 bits (82), Expect = 7e-04
Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 22/133 (16%)
Query: 41 ILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQRKIRP--- 97
I+ G N GK+T++ L + + G K ++ E + D+ G +
Sbjct: 3 IIFAGRSNVGKSTLIYRLTGKKVR-RGKRPGVTRKIIEIEWKNHKIIDMPGFGFMMGLPK 61
Query: 98 ------------YWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLT------G 139
+ + N D+ + V+D + + E+ D +
Sbjct: 62 EVQERIKDEIVHFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKRGEIPIDVEFYQFLRELD 121
Query: 140 VPLLVYANKQDLL 152
+P +V NK D +
Sbjct: 122 IPTIVAVNKLDKI 134
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 35.8 bits (81), Expect = 8e-04
Identities = 11/83 (13%), Positives = 29/83 (34%), Gaps = 3/83 (3%)
Query: 38 ELRILLLGLDNAGKTTILKTLAS-EDISHITPTQGFNIKSVQSEGFKLNVWDIGG--QRK 94
E+++ + G GK+ ++ + I PT + + ++ +I ++
Sbjct: 2 EVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAGQE 61
Query: 95 IRPYWRNYFDNTDILIYVIDSAD 117
+ + + V D D
Sbjct: 62 DTIQREGHMRWGEGFVLVYDITD 84
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 34.6 bits (78), Expect = 0.002
Identities = 17/116 (14%), Positives = 35/116 (30%), Gaps = 5/116 (4%)
Query: 38 ELRILLLGLDNAGKTTILKTLA----SEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQR 93
+ R+ + G GK++++ E + S L + D G
Sbjct: 2 DYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSH 61
Query: 94 KIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLT-GVPLLVYANK 148
+ R I V + EE ++ + +P+++ NK
Sbjct: 62 QFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNK 117
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 34.3 bits (77), Expect = 0.003
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 41 ILLLGLDNAGKTTILKTLASEDISHITPTQGFN 73
+ ++G N GK+T+L L ++ I+P
Sbjct: 8 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTT 40
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 34.3 bits (77), Expect = 0.003
Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 3/81 (3%)
Query: 41 ILLLGLDNAGKTTILKTLASEDISHITPTQG---FNIKSVQSEGFKLNVWDIGGQRKIRP 97
+L++G N GK+T+ L + + + +G ++ K P
Sbjct: 3 VLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTFKLVDTCGVFDNP 62
Query: 98 YWRNYFDNTDILIYVIDSADV 118
++ + +I AD+
Sbjct: 63 QDIISQKMKEVTLNMIREADL 83
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain
{Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 32.2 bits (72), Expect = 0.016
Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Query: 40 RILLLGLDNAGKTTILKTLASEDI---SHITPTQGFNIKSVQSEGFKLNVW-DIGGQRKI 95
+ L+G + GK+T+L ++S + T N+ V+++ + V D+ G +
Sbjct: 3 DVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDDGRSFVMADLPGLIEG 62
Query: 96 RPYWRNYFDNT 106
Sbjct: 63 AHQGVGLGHQF 73
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 31.8 bits (71), Expect = 0.018
Identities = 14/73 (19%), Positives = 23/73 (31%), Gaps = 1/73 (1%)
Query: 39 LRILLLGLDNAGKTTILKTLASE-DISHITPTQGFNIKSVQSEGFKLNVWDIGGQRKIRP 97
+R++L+G AGK T L +H+ + + L I Q +
Sbjct: 3 IRMVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGGLVS 62
Query: 98 YWRNYFDNTDILI 110
D L
Sbjct: 63 DDIMVNMIKDELT 75
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 31.8 bits (71), Expect = 0.021
Identities = 19/113 (16%), Positives = 34/113 (30%), Gaps = 8/113 (7%)
Query: 39 LRILLLGLDNAGKTTILKTLASE-DISHITPTQGFNIKSVQSEGFKLNVWDIGGQRKIRP 97
+R+LLLG AGK T LA + I I+ + F + + + P
Sbjct: 1 MRVLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVP 60
Query: 98 Y------WRNYFDNTDILI-YVIDSADVKRFEESGFELHELLSDEKLTGVPLL 143
+ +N D +++D + + V
Sbjct: 61 SDLTNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEF 113
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 31.3 bits (70), Expect = 0.035
Identities = 7/36 (19%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 34 SPEKELRILLLGLDNAGKTTILKTLASE-DISHITP 68
+ + LR ++G +GK T+ + ++ H++
Sbjct: 2 ASARLLRAAIMGAPGSGKGTVSSRITKHFELKHLSS 37
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 30.9 bits (68), Expect = 0.040
Identities = 18/118 (15%), Positives = 37/118 (31%), Gaps = 7/118 (5%)
Query: 40 RILLLGLDNAGKTTILKTLASED---ISHITPTQGFNIKSVQSEGFKLNVWDIGGQ---- 92
R++L+G GK+T+ A S + + +
Sbjct: 5 RVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMWENK 64
Query: 93 RKIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQD 150
+ + D + V D FE++ +L + +P+++ NK D
Sbjct: 65 GENEWLHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKSD 122
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 31.1 bits (69), Expect = 0.044
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 32 RSSPEKELRILLLGLDNAGKTTILKTLASE-DISHITP 68
SP++ I +LG AGK T + L + H++
Sbjct: 2 AFSPDQVSVIFVLGGPGAGKGTQCEKLVKDYSFVHLSA 39
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 30.7 bits (68), Expect = 0.047
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 37 KELRILLLGLDNAGKTTILKTLASE-DISHITPTQ 70
K +R +LLG AGK T LA + H+
Sbjct: 2 KGVRAVLLGPPGAGKGTQAPKLAKNFCVCHLATGD 36
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 30.3 bits (67), Expect = 0.064
Identities = 7/33 (21%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
Query: 39 LRILLLGLDNAGKTTILKTLASEDISHITPTQG 71
++I++ G GKTT++K + +
Sbjct: 1 MKIIITGEPGVGKTTLVKKIVER----LGKRAI 29
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 29.9 bits (66), Expect = 0.089
Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 39 LRILLLGLDNAGKTTILKTLASE-DISHITP 68
+ ++L+GL AGK T + + + I HI+
Sbjct: 1 MNLVLMGLPGAGKGTQAEKIVAAYGIPHIST 31
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 29.9 bits (66), Expect = 0.093
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 39 LRILLLGLDNAGKTTILKTLASE-DISHITPTQ 70
+RI+LLG AGK T + + + I I+
Sbjct: 1 MRIILLGAPVAGKGTQAQFIMEKYGIPQISTGD 33
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12
uptake, BtuD {Escherichia coli [TaxId: 562]}
Length = 231
Score = 29.9 bits (67), Expect = 0.094
Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 12/93 (12%)
Query: 43 LLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQSEGFKLNVWD---IGGQRKIRPYW 99
L+G + AGK+T+L +A +T +G S+Q G L W + R
Sbjct: 30 LVGPNGAGKSTLLARMA-----GMTSGKG----SIQFAGQPLEAWSATKLALHRAYLSQQ 80
Query: 100 RNYFDNTDILIYVIDSADVKRFEESGFELHELL 132
+ T + Y+ K E ++ L
Sbjct: 81 QTPPFATPVWHYLTLHQHDKTRTELLNDVAGAL 113
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 30.2 bits (67), Expect = 0.10
Identities = 11/52 (21%), Positives = 19/52 (36%)
Query: 14 ENQVKDLALGLLAILKKLRSSPEKELRILLLGLDNAGKTTILKTLASEDISH 65
E++ +L + LR+ + G AGK+T L+ I
Sbjct: 30 ESRHPRHQALSTQLLDAIMPYCGNTLRLGVTGTPGAGKSTFLEAFGMLLIRE 81
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 29.7 bits (65), Expect = 0.11
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 6/51 (11%)
Query: 11 MEKENQVKDLALGLLAILKKLRSSPEKELRILLLGLDNAGKTTILKTLASE 61
ME +++ L +LAI L + + GL +GKTT+ L+
Sbjct: 1 MELRDRIDFLCKTILAI------KTAGRLVLGIDGLSRSGKTTLANQLSQT 45
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 29.7 bits (65), Expect = 0.11
Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 6/84 (7%)
Query: 30 KLRSSPEKEL-RILLLGLDNAGKTTILKTLASEDISHIT-----PTQGFNIKSVQSEGFK 83
K PE L I L G N GK++ + +L + T TQ N + E
Sbjct: 14 KPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELHF 73
Query: 84 LNVWDIGGQRKIRPYWRNYFDNTD 107
++V G + + + +
Sbjct: 74 VDVPGYGFAKVSKSEREAWGRMIE 97
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB
{Methylobacterium extorquens [TaxId: 408]}
Length = 323
Score = 29.9 bits (66), Expect = 0.11
Identities = 9/52 (17%), Positives = 23/52 (44%)
Query: 14 ENQVKDLALGLLAILKKLRSSPEKELRILLLGLDNAGKTTILKTLASEDISH 65
E++ D + ++ + + +R+ + G+ GK+T + L S +
Sbjct: 27 ESRRADHRAAVRDLIDAVLPQTGRAIRVGITGVPGVGKSTTIDALGSLLTAA 78
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 29.8 bits (66), Expect = 0.11
Identities = 7/33 (21%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 37 KELRILLLGLDNAGKTTILKTLASE-DISHITP 68
L++++ G +GK T + + ++ ++HI+
Sbjct: 2 DPLKVMISGAPASGKGTQCELIKTKYQLAHISA 34
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum
aerophilum [TaxId: 13773]}
Length = 276
Score = 29.8 bits (65), Expect = 0.14
Identities = 24/137 (17%), Positives = 36/137 (26%), Gaps = 3/137 (2%)
Query: 14 ENQVKDLALGLLAILKKLRSSPEKELRILLLGLDNAGKTTILKTLASEDISHITPTQGFN 73
E Q++ L + L L+ R LLG GKT L+ L T +
Sbjct: 22 EQQLQQLDILLGNWLRNPGHHYP---RATLLGRPGTGKTVTLRKLWELYKDKTTARFVYI 78
Query: 74 IKSVQSEGFKLNVWDIGGQRKIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLS 133
+ + P D L+ + L
Sbjct: 79 NGFIYRNFTAIIGEIARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAP 138
Query: 134 DEKLTGVPLLVYANKQD 150
D T + L A+K
Sbjct: 139 DILSTFIRLGQEADKLG 155
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 29.5 bits (65), Expect = 0.15
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 12 EKENQVKDLALGLLAILKKLRSSPEKELRILLLGLDNAGKTTILKTLASE 61
+ Q ++ L L + + + E LL G +GKT++ + E
Sbjct: 6 FTDKQFENRLNDNLEELIQGKKAVESPTAFLLGGQPGSGKTSLRSAIFEE 55
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 29.2 bits (64), Expect = 0.16
Identities = 11/100 (11%), Positives = 30/100 (30%), Gaps = 15/100 (15%)
Query: 41 ILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQRKIRPYWR 100
++ G+ GK+T+L + + + ++G + + G
Sbjct: 4 GIVTGIPGVGKSTVLAKVK---------------EILDNQGINNKIINYGDFMLATALKL 48
Query: 101 NYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGV 140
Y + D + + K ++ + E +
Sbjct: 49 GYAKDRDEMRKLSVEKQKKLQIDAAKGIAEEARAGGEGYL 88
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal
recognition particle receptor FtsY {Thermotoga maritima
[TaxId: 2336]}
Length = 213
Score = 29.3 bits (65), Expect = 0.17
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 29 KKLRSSPEKELRILLLGLDNAGKTTILKTLA 59
KL PE I+++G++ GKTT LA
Sbjct: 2 TKLNVPPEPPFVIMVVGVNGTGKTTSCGKLA 32
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 29.5 bits (66), Expect = 0.17
Identities = 23/110 (20%), Positives = 35/110 (31%), Gaps = 3/110 (2%)
Query: 43 LLGLDNAGKTTILKTLA---SEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQRKIRPYW 99
L+G + AGKTT L +A I ++ + + R+I P
Sbjct: 37 LIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHVINRMGIALVPEGRRIFPEL 96
Query: 100 RNYFDNTDILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQ 149
Y + D +KR E F L L + L +Q
Sbjct: 97 TVYENLMMGAYNRKDKEGIKRDLEWIFSLFPRLKERLKQLGGTLSGGEQQ 146
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
globisporus [TaxId: 1459]}
Length = 182
Score = 29.1 bits (64), Expect = 0.20
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 39 LRILLLGLDNAGKTTILKTLASE-DISHITPTQGF 72
+ I+L+GL AGK T + + HI+ F
Sbjct: 1 MNIVLMGLPGAGKGTQADRIVEKYGTPHISTGDMF 35
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 29.2 bits (64), Expect = 0.20
Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 3/85 (3%)
Query: 41 ILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQRKIRPYWR 100
I+++GL GKT I K L PT+ FN+ + + K + +
Sbjct: 5 IVMVGLPARGKTYISKKLTRYLNFIGVPTREFNVGQYRRDMVKTYKSF---EFFLPDNEE 61
Query: 101 NYFDNTDILIYVIDSADVKRFEESG 125
+ ++ EE G
Sbjct: 62 GLKIRKQCALAALNDVRKFLSEEGG 86
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 29.0 bits (63), Expect = 0.21
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 35 PEKELRILLLGLDNAGKTTILKTLASEDISHITP 68
+ + + G NAGK++ L TL ++ T
Sbjct: 13 SDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTS 46
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 28.8 bits (63), Expect = 0.22
Identities = 14/73 (19%), Positives = 22/73 (30%), Gaps = 8/73 (10%)
Query: 41 ILLLGLDNAGKTTILKTLASED-------ISHIT-PTQGFNIKSVQSEGFKLNVWDIGGQ 92
++L G AGK+T+LK L E +SH T + +
Sbjct: 3 VVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEEDGKDYYFVTREMMQRDIA 62
Query: 93 RKIRPYWRNYFDN 105
+ N
Sbjct: 63 AGDFIEHAEFSGN 75
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 28.4 bits (62), Expect = 0.25
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 40 RILLLGLDNAGKTTILKTLASE 61
+ +L+GL +GK+TI + LA
Sbjct: 3 KAVLVGLPGSGKSTIGRRLAKA 24
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania
major [TaxId: 5664]}
Length = 174
Score = 28.4 bits (62), Expect = 0.29
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 37 KELRILLLGLDNAGKTTILKTLASE 61
K + IL+ G GKT++ + +A+E
Sbjct: 4 KGINILITGTPGTGKTSMAEMIAAE 28
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 28.5 bits (62), Expect = 0.30
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 36 EKELRILLLGLDNAGKTTILKTLASE 61
EK I L+G AGK+TI + LA +
Sbjct: 1 EKR-NIFLVGPMGAGKSTIGRQLAQQ 25
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 28.3 bits (62), Expect = 0.32
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 7/34 (20%)
Query: 41 ILLLGLDNAGKTTILKTLASED-------ISHIT 67
++LLG G+ I TL ++ I H T
Sbjct: 6 LVLLGAHGVGRRHIKNTLITKHPDRFAYPIPHTT 39
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 194
Score = 28.4 bits (62), Expect = 0.33
Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 39 LRILLLGLDNAGKTTILKTLASE-DISHITP 68
L + +LG AGK T + + +H++
Sbjct: 2 LVVFVLGGPGAGKGTQCARIVEKYGYTHLSA 32
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal
domain {Fission yeast (Schizosaccharomyces pombe)
[TaxId: 4896]}
Length = 296
Score = 28.6 bits (63), Expect = 0.34
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 29 KKLRSSPEKELRILLLGLDNAGKTTILKTLASEDISHI 66
K P L+ ++G+ N GK+T + + + +
Sbjct: 1 KVQWGRPGNNLKTGIVGMPNVGKSTFFRAITKSVLGNP 38
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 28.4 bits (62), Expect = 0.34
Identities = 7/35 (20%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 37 KELRILLLGLDNAGKTTILKTLASE-DISHITPTQ 70
K + +LG +GK T + + H++
Sbjct: 5 KPNVVFVLGGPGSGKGTQCANIVRDFGWVHLSAGD 39
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 28.4 bits (62), Expect = 0.34
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 41 ILLLGLDNAGKTTILKTLA 59
+++ G+ G TT +
Sbjct: 4 VVVTGVPGVGSTTSSQLAM 22
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi
[TaxId: 556]}
Length = 170
Score = 28.0 bits (61), Expect = 0.35
Identities = 10/68 (14%), Positives = 19/68 (27%), Gaps = 1/68 (1%)
Query: 41 ILLLGLDNAGKTTILKTLASE-DISHITPTQGFNIKSVQSEGFKLNVWDIGGQRKIRPYW 99
I ++G G TT+ + LA + S + + G R+
Sbjct: 5 IFMVGARGCGMTTVGRELARALGYEFVDTDIFMQHTSGMTVADVVAAEGWPGFRRRESEA 64
Query: 100 RNYFDNTD 107
+
Sbjct: 65 LQAVATPN 72
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 27.9 bits (61), Expect = 0.43
Identities = 8/28 (28%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 34 SPEKELRILLLGLDNAGKTTILKTLASE 61
SP E+ ++ +G AGK+T ++
Sbjct: 11 SPNPEV-VVAVGFPGAGKSTFIQEHLVS 37
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 28.1 bits (61), Expect = 0.43
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 41 ILLLGLDNAGKTTILKTLASE 61
I+L G +AGK+ I++ L S
Sbjct: 6 IILNGGSSAGKSGIVRCLQSV 26
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type
1, different strains [TaxId: 10298]}
Length = 329
Score = 28.0 bits (62), Expect = 0.45
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 39 LRILLLGLDNAGKTTILKTLASE 61
LR+ + G GKTT + L +
Sbjct: 5 LRVYIDGPHGMGKTTTTQLLVAL 27
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus
[TaxId: 10335]}
Length = 331
Score = 28.0 bits (62), Expect = 0.47
Identities = 9/23 (39%), Positives = 10/23 (43%)
Query: 39 LRILLLGLDNAGKTTILKTLASE 61
LRI L G GKTT +
Sbjct: 6 LRIYLDGAYGIGKTTAAEEFLHH 28
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 27.7 bits (60), Expect = 0.48
Identities = 12/100 (12%), Positives = 27/100 (27%), Gaps = 4/100 (4%)
Query: 40 RILLLGLDNAGKTTILKTLA----SEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQRKI 95
+ +LG +++GK+ ++ LA + F + + + +
Sbjct: 9 TVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDYPQMALGHQ 68
Query: 96 RPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSDE 135
R + I D + F D
Sbjct: 69 RYIDYAVRHSHKIAFIDTDFITTQAFCIQYEGKAHPFLDS 108
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 27.7 bits (60), Expect = 0.51
Identities = 5/21 (23%), Positives = 13/21 (61%)
Query: 41 ILLLGLDNAGKTTILKTLASE 61
+L+G+ +GK+ + +A +
Sbjct: 9 YVLMGVSGSGKSAVASEVAHQ 29
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS
kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 208
Score = 27.9 bits (61), Expect = 0.51
Identities = 18/86 (20%), Positives = 29/86 (33%), Gaps = 6/86 (6%)
Query: 41 ILLLGLDNAGKTTI----LKTLASEDISHITPTQGFNIKSVQSE--GFKLNVWDIGGQRK 94
I L GL +GK+T+ L + H G NI+ ++ GF + +R
Sbjct: 27 IWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRFGLNKDLGFSEADRNENIRRI 86
Query: 95 IRPYWRNYFDNTDILIYVIDSADVKR 120
N+ + I R
Sbjct: 87 AEVAKLFADSNSIAITSFISPYRKDR 112
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 27.6 bits (60), Expect = 0.56
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 41 ILLLGLDNAGKTTILKTLASE 61
+LL G +GK+TI + LA+
Sbjct: 7 LLLSGHPGSGKSTIAEALANL 27
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4
[TaxId: 10331]}
Length = 333
Score = 28.0 bits (62), Expect = 0.56
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 39 LRILLLGLDNAGKTTILKTLASE 61
+RI L G+ GK+T + +AS
Sbjct: 7 VRIYLDGVYGIGKSTTGRVMASA 29
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 27.6 bits (60), Expect = 0.57
Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 2/74 (2%)
Query: 40 RILLLGLDNAGKTTILKTLASE-DISHI-TPTQGFNIKSVQSEGFKLNVWDIGGQRKIRP 97
ILL G GKTT+ K LAS+ + +I + + + + R +
Sbjct: 6 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVVDE 65
Query: 98 YWRNYFDNTDILIY 111
+ I+ Y
Sbjct: 66 LDNQMREGGVIVDY 79
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 27.4 bits (59), Expect = 0.64
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 41 ILLLGLDNAGKTTILKTLA 59
I L G N+GK I + L
Sbjct: 9 IFLTGYMNSGKDAIARALQ 27
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter
jejuni [TaxId: 197]}
Length = 161
Score = 26.8 bits (58), Expect = 0.91
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 41 ILLLGLDNAGKTTILKTLASE 61
I+ +G +GK+T+ + LA +
Sbjct: 3 IVFIGFMGSGKSTLARALAKD 23
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 26.9 bits (58), Expect = 0.98
Identities = 11/80 (13%), Positives = 27/80 (33%), Gaps = 3/80 (3%)
Query: 37 KELRILLLGLDNAGKTTILKTLASEDIS-HITPTQGFNIKSVQSEGFKLNVWDIGGQRKI 95
+ +L+ G +GKTT L + ++V ++ +K
Sbjct: 8 QPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRNVNGVNLLELMYKD--PKKW 65
Query: 96 RPYWRNYFDNTDILIYVIDS 115
+++Y T + + +
Sbjct: 66 AMPFQSYVTLTMLQSHTAPT 85
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 194
Score = 26.8 bits (58), Expect = 0.98
Identities = 7/44 (15%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Query: 31 LRSSPEKELRILLLGLDNAGKTTILKTLASE-DISHITPTQGFN 73
+ +K I ++G +GK T + + + +H++
Sbjct: 1 MEEKLKKSKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLR 44
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 26.6 bits (57), Expect = 1.0
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 41 ILLLGLDNAGKTTILKTLASE 61
IL +G +GK+T + ++
Sbjct: 5 ILTIGCPGSGKSTWAREFIAK 25
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 26.9 bits (58), Expect = 1.1
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 41 ILLLGLDNAGKTTILKTLASE 61
++ G GK+T K LA++
Sbjct: 5 YIITGPAGVGKSTTCKRLAAQ 25
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase
(APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 195
Score = 27.0 bits (58), Expect = 1.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 41 ILLLGLDNAGKTTILKTLA 59
+ L GL AGKTT+ L
Sbjct: 22 VWLTGLSGAGKTTVSMALE 40
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 26.7 bits (58), Expect = 1.3
Identities = 10/74 (13%), Positives = 22/74 (29%), Gaps = 9/74 (12%)
Query: 41 ILLLGLDNAGKTTILKTLASED--------ISHIT-PTQGFNIKSVQSEGFKLNVWDIGG 91
++ AGK+++++ L +SH T + + + +
Sbjct: 5 YIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMI 64
Query: 92 QRKIRPYWRNYFDN 105
R F N
Sbjct: 65 SRDAFLEHAEVFGN 78
>d1apsa_ d.58.10.1 (A:) Acylphosphatase {Horse (Equus caballus)
[TaxId: 9796]}
Length = 98
Score = 25.6 bits (56), Expect = 1.3
Identities = 7/47 (14%), Positives = 14/47 (29%)
Query: 77 VQSEGFKLNVWDIGGQRKIRPYWRNYFDNTDILIYVIDSADVKRFEE 123
VQ F++ D + + + +N T V +
Sbjct: 17 VQGVCFRMYAEDEARKIGVVGWVKNTSKGTVTGQVQGPEEKVNSMKS 63
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 26.5 bits (57), Expect = 1.4
Identities = 10/95 (10%), Positives = 26/95 (27%), Gaps = 7/95 (7%)
Query: 41 ILLLGLDNAGKTTILKTLASED------ISHITPTQGFNIKSVQSEGFKLNVWDIGGQRK 94
++L G GK+T+++ L +S T + ++
Sbjct: 5 VVLSGPSAVGKSTVVRCLRERIPNLHFSVSATTRAPRPGEVD-GVDYHFIDPTRFQQLID 63
Query: 95 IRPYWRNYFDNTDILIYVIDSADVKRFEESGFELH 129
+ + + V+ +G +
Sbjct: 64 QGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVL 98
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 26.1 bits (56), Expect = 1.6
Identities = 10/76 (13%), Positives = 22/76 (28%), Gaps = 14/76 (18%)
Query: 41 ILLLGLDNAGKTTILKTLASE--------------DISHITPTQGFNIKSVQSEGFKLNV 86
+ L G GKTT++ + ++ GF++ ++ L+
Sbjct: 4 VFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPLSR 63
Query: 87 WDIGGQRKIRPYWRNY 102
+ R
Sbjct: 64 VGLEPPPGKRECRVGQ 79
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 26.5 bits (57), Expect = 1.7
Identities = 11/51 (21%), Positives = 20/51 (39%)
Query: 107 DILIYVIDSADVKRFEESGFELHELLSDEKLTGVPLLVYANKQDLLGAAPA 157
+++Y+ D +K+ + F L + G + NK DLL
Sbjct: 125 PLVVYISDPEILKKPNDYCFVRFFALLIDLRLGATTIPALNKVDLLSEEEK 175
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal
domain {Aeropyrum pernix [TaxId: 56636]}
Length = 287
Score = 26.3 bits (56), Expect = 1.7
Identities = 13/133 (9%), Positives = 30/133 (22%), Gaps = 5/133 (3%)
Query: 12 EKENQVKDLALGLLAILKKLRSSPEKELRILLLGLDNAGKTTILKTLASEDISHITPTQG 71
+ + + LA L L + + +G GKTT+ K
Sbjct: 20 VRRGEAEALARIYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGL 79
Query: 72 -----FNIKSVQSEGFKLNVWDIGGQRKIRPYWRNYFDNTDILIYVIDSADVKRFEESGF 126
+ + + + + + +
Sbjct: 80 TVKQAYVNAFNAPNLYTILSLIVRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILD 139
Query: 127 ELHELLSDEKLTG 139
E +LS ++
Sbjct: 140 EFQSMLSSPRIAA 152
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 26.2 bits (56), Expect = 1.8
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 41 ILLLGLDNAGKTTILKTLA 59
I + G+D AGK T+++ L+
Sbjct: 3 IAIEGVDGAGKRTLVEKLS 21
>d1urra_ d.58.10.1 (A:) Acylphosphatase 2 (Cg18505) {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 97
Score = 25.2 bits (55), Expect = 1.8
Identities = 7/47 (14%), Positives = 15/47 (31%)
Query: 77 VQSEGFKLNVWDIGGQRKIRPYWRNYFDNTDILIYVIDSADVKRFEE 123
VQ F+ + + +R + N D T ++ +
Sbjct: 16 VQGVFFRKHTSHEAKRLGVRGWCMNTRDGTVKGQLEAPMMNLMEMKH 62
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal
recognition particle receptor FtsY {Thermus aquaticus
[TaxId: 271]}
Length = 207
Score = 25.8 bits (56), Expect = 2.0
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 41 ILLLGLDNAGKTTILKTLA 59
+L++G++ GKTT + L
Sbjct: 9 VLVVGVNGVGKTTTIAKLG 27
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 26.1 bits (56), Expect = 2.0
Identities = 7/21 (33%), Positives = 9/21 (42%)
Query: 41 ILLLGLDNAGKTTILKTLASE 61
+ GKTT+LK L
Sbjct: 5 LAFAAWSGTGKTTLLKKLIPA 25
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 209
Score = 26.1 bits (56), Expect = 2.1
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 41 ILLLGLDNAGKTTILKTLA 59
I+L G+D AGK+T + L
Sbjct: 6 IVLEGVDRAGKSTQSRKLV 24
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544
{Thermotoga maritima [TaxId: 2336]}
Length = 238
Score = 26.1 bits (57), Expect = 2.2
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 43 LLGLDNAGKTTILKTLA 59
L+G + AGKTT L+ ++
Sbjct: 33 LIGPNGAGKTTTLRIIS 49
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 214
Score = 26.0 bits (56), Expect = 2.3
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 41 ILLLGLDNAGKTTILKTLA 59
IL+ GLD GKTT L
Sbjct: 6 ILIEGLDRTGKTTQCNILY 24
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain
{Caenorhabditis elegans [TaxId: 6239]}
Length = 277
Score = 25.9 bits (56), Expect = 2.5
Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 27 ILKKLRSSPEKELRILLL-GLDNAGKTTILKTLASED 62
++KKL + + L L G +GK+ I S+
Sbjct: 32 VIKKLDEMCDLDSFFLFLHGRAGSGKSVIASQALSKS 68
>d2a3la1 c.1.9.1 (A:212-839) AMP deaminase (AMPD), catalytic domain
{Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 628
Score = 26.1 bits (57), Expect = 2.6
Identities = 9/47 (19%), Positives = 20/47 (42%), Gaps = 7/47 (14%)
Query: 97 PYWRNYFDNTDILIYVIDSADVKRFE-------ESGFELHELLSDEK 136
+F + ++ VI + +++ E F LH +L+ +K
Sbjct: 112 ADATAFFTDLHHVLKVIAAGNIRTLCHRRLVLLEQKFNLHLMLNADK 158
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 25.7 bits (56), Expect = 2.7
Identities = 4/17 (23%), Positives = 12/17 (70%)
Query: 43 LLGLDNAGKTTILKTLA 59
++G + +GK+T++ +
Sbjct: 35 IIGPNGSGKSTLINVIT 51
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence
recognition protein Ffh {Archaeon Acidianus ambivalens
[TaxId: 2283]}
Length = 211
Score = 25.5 bits (55), Expect = 2.8
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 41 ILLLGLDNAGKTTILKTLA 59
I+L+G+ GK T LA
Sbjct: 15 IMLVGVQGTGKATTAGKLA 33
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI
{Rhodobacter capsulatus [TaxId: 1061]}
Length = 333
Score = 25.7 bits (55), Expect = 2.9
Identities = 12/61 (19%), Positives = 23/61 (37%), Gaps = 5/61 (8%)
Query: 41 ILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQRKIRPYWR 100
+L+ G GK+T ++ LA+ + I +G + S E + D +
Sbjct: 31 VLVFGDRGTGKSTAVRALAA-LLPEIEAVEGCPVSSPNVE----MIPDWATVLSTNVIRK 85
Query: 101 N 101
Sbjct: 86 P 86
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine
permease {Salmonella typhimurium [TaxId: 90371]}
Length = 258
Score = 25.6 bits (56), Expect = 3.0
Identities = 10/62 (16%), Positives = 26/62 (41%), Gaps = 7/62 (11%)
Query: 43 LLGLDNAGKTTILKTLASEDISHITPTQG---FNIKSVQSEGFKLNVWDIGGQRKIRPYW 99
++G +GK+T L+ + + P++G N +++ K + + ++R
Sbjct: 33 IIGSSGSGKSTFLRCINFLE----KPSEGAIIVNGQNINLVRDKDGQLKVADKNQLRLLR 88
Query: 100 RN 101
Sbjct: 89 TR 90
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal
recognition particle receptor FtsY {Escherichia coli
[TaxId: 562]}
Length = 211
Score = 25.4 bits (55), Expect = 3.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 31 LRSSPEKELRILLLGLDNAGKTTILKTLA 59
L + IL++G++ GKTT + LA
Sbjct: 2 LNVEGKAPFVILMVGVNGVGKTTTIGKLA 30
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 319
Score = 25.7 bits (55), Expect = 3.2
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 39 LRILLLGLDNAGKTTILKTL 58
+ I ++G N GK+T
Sbjct: 1 MEIGVVGKPNVGKSTFFSAA 20
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895
{Pyrococcus furiosus [TaxId: 2261]}
Length = 200
Score = 25.3 bits (55), Expect = 3.2
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 43 LLGLDNAGKTTILKTLA 59
G + GKTT+LKT++
Sbjct: 32 FHGPNGIGKTTLLKTIS 48
>d1g6sa_ d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate (EPSP)
synthase {Escherichia coli [TaxId: 562]}
Length = 427
Score = 25.7 bits (55), Expect = 3.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 39 LRILLLGLDNAGKTTILKTLASEDI 63
R LLL GKT + L S+D+
Sbjct: 26 NRALLLAALAHGKTVLTNLLDSDDV 50
>d1a6qa1 a.159.1.1 (A:297-368) Protein serine/threonine
phosphatase 2C, C-terminal domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 72
Score = 24.3 bits (53), Expect = 3.4
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 53 TILKTLASEDISHITPTQGFNIK 75
+++TLASE+I + P K
Sbjct: 36 HVMRTLASENIPSLPPGGELASK 58
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence
recognition protein Ffh {Thermus aquaticus [TaxId:
271]}
Length = 207
Score = 25.5 bits (55), Expect = 3.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 41 ILLLGLDNAGKTTILKTLA 59
L+GL +GKTT LA
Sbjct: 13 WFLVGLQGSGKTTTAAKLA 31
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 25.3 bits (54), Expect = 3.4
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 41 ILLLGLDNAGKTTILKTLASEDISHIT 67
I++ G GK+T+LK L +E
Sbjct: 4 IVISGPSGTGKSTLLKKLFAEYPDSFG 30
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal
domain {Methanococcus maripaludis [TaxId: 39152]}
Length = 179
Score = 25.1 bits (53), Expect = 3.6
Identities = 13/81 (16%), Positives = 27/81 (33%)
Query: 37 KELRILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQSEGFKLNVWDIGGQRKIR 96
K + + + G + GKTT+ K L + + K + + + + R
Sbjct: 4 KNINLGIFGHIDHGKTTLSKVLTEIASTSAHDKLPESQKRGITIDIGFSAFKLENYRITL 63
Query: 97 PYWRNYFDNTDILIYVIDSAD 117
+ D ++ D D
Sbjct: 64 VDAPGHADLIRAVVSAADIID 84
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli
[TaxId: 562]}
Length = 210
Score = 25.3 bits (54), Expect = 3.7
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 41 ILLLGLDNAGKTTILKTLA 59
I++ GL+ AGKTT +
Sbjct: 5 IVIEGLEGAGKTTARNVVV 23
>d1rf6a_ d.68.2.2 (A:) 5-enol-pyruvyl shikimate-3-phosphate (EPSP)
synthase {Streptococcus pneumoniae [TaxId: 1313]}
Length = 427
Score = 25.2 bits (54), Expect = 4.0
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 39 LRILLLGLDNAGKTTILKTLASEDISH 65
R ++ G G+T + L ED+
Sbjct: 24 HRSIIFGSLAEGETKVYDILRGEDVLS 50
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import
ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus
[TaxId: 2234]}
Length = 240
Score = 25.0 bits (54), Expect = 4.4
Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 4/29 (13%)
Query: 43 LLGLDNAGKTTILKTLASEDISHITPTQG 71
LLG AGK+ L+ +A + P +G
Sbjct: 29 LLGPTGAGKSVFLELIA----GIVKPDRG 53
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase
domain {Simian virus 40 [TaxId: 10633]}
Length = 362
Score = 25.0 bits (54), Expect = 4.9
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 24 LLAILKKLRSSPEKELRILLLGLDNAGKTTILKTLASE 61
+ LK + + K+ L G ++GKTT+ L
Sbjct: 140 VYDFLKCMVYNIPKKRYWLFKGPIDSGKTTLAAALLEL 177
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Length = 443
Score = 25.1 bits (54), Expect = 5.0
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 41 ILLLGLDNAGKTTILKTLA 59
IL++G GKT I + LA
Sbjct: 52 ILMIGPTGVGKTEIARRLA 70
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 24.9 bits (54), Expect = 5.0
Identities = 7/31 (22%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
Query: 41 ILLLGLDNAGKTTILKTLASEDISHITPTQG 71
+ + G +GKT++L + E + ++G
Sbjct: 65 LAITGSTGSGKTSLLMLILGE----LEASEG 91
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 25.0 bits (54), Expect = 5.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 43 LLGLDNAGKTTILKTLA 59
+LG AGKT L+ +A
Sbjct: 31 ILGPTGAGKTLFLELIA 47
>d1ejda_ d.68.2.2 (A:) UDP-N-acetylglucosamine enolpyruvyl
transferase (EPT, MurA, MurZ) {Enterobacter cloacae
[TaxId: 550]}
Length = 419
Score = 24.8 bits (53), Expect = 6.0
Identities = 7/27 (25%), Positives = 8/27 (29%)
Query: 39 LRILLLGLDNAGKTTILKTLASEDISH 65
L IL L I +DI
Sbjct: 26 LPILFAALLAEEPVEIQNVPKLKDIDT 52
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 24.5 bits (53), Expect = 6.3
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 43 LLGLDNAGKTTILKTLA 59
+G GK+T+L+ +A
Sbjct: 31 FVGPSGCGKSTLLRMIA 47
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 24.7 bits (53), Expect = 6.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 43 LLGLDNAGKTTILKTLA 59
+LG AGKTT ++ +A
Sbjct: 36 ILGPSGAGKTTFMRIIA 52
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022,
N-terminal domain {Pyrococcus horikoshii [TaxId:
53953]}
Length = 239
Score = 24.4 bits (53), Expect = 6.9
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
Query: 43 LLGLDNAGKTTILKTLASEDISHITPTQG 71
LLG GKTT L+ +A + PT+G
Sbjct: 37 LLGPSGCGKTTTLRMIAGLE----EPTEG 61
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal
domain {Haemophilus influenzae [TaxId: 727]}
Length = 278
Score = 24.5 bits (53), Expect = 6.9
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 39 LRILLLGLDNAGKTTILKTLASEDI 63
+ ++GL N GK+T+ L I
Sbjct: 3 FKCGIVGLPNVGKSTLFNALTKAGI 27
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 24.6 bits (52), Expect = 7.0
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 40 RILLLGLDNAGKTTILKTLASE 61
R+ + G GK+T +K L
Sbjct: 4 RLSIEGNIAVGKSTFVKLLTKT 25
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId:
1313]}
Length = 223
Score = 24.2 bits (51), Expect = 7.7
Identities = 10/88 (11%), Positives = 29/88 (32%), Gaps = 3/88 (3%)
Query: 37 KELRILLLGLDNAGKTTILKTLASE-DISHITPTQGF--NIKSVQSEGFKLNVWDIGGQR 93
K ++I + G ++GK+T+ K +A + +++ + + +
Sbjct: 2 KTIQIAIDGPASSGKSTVAKIIAKDFGFTYLDTGAMYRAATYMALKNQLGVEEVEALLAL 61
Query: 94 KIRPYWRNYFDNTDILIYVIDSADVKRF 121
+ T + + D+
Sbjct: 62 LDQHPISFGRSETGDQLVFVGDVDITHP 89
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK,
N-terminal domain {Archaeon Thermococcus litoralis
[TaxId: 2265]}
Length = 240
Score = 24.1 bits (52), Expect = 8.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 43 LLGLDNAGKTTILKTLA 59
LLG GKTT L+ +A
Sbjct: 34 LLGPSGCGKTTTLRMIA 50
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 241
Score = 24.2 bits (51), Expect = 8.6
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 40 RILLLGLDNAGKTTILKTLA 59
+I + G AGK+T + L
Sbjct: 4 KISIEGNIAAGKSTFVNILK 23
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 24.3 bits (51), Expect = 8.9
Identities = 8/37 (21%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Query: 28 LKKLRSSPEKELRI-----LLLGLDNAGKTTILKTLA 59
+K RS + + L++G + +GK+++L +
Sbjct: 8 VKNFRSHSDTVVEFKEGINLIIGQNGSGKSSLLDAIL 44
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 255
Score = 24.0 bits (52), Expect = 9.5
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 8/77 (10%)
Query: 27 ILKKLRSSPEKELRILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQSEGFKLNV 86
ILK + S EK + +G+ GK+T++ + T G + +G +
Sbjct: 33 ILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFY----DVTSG----QILIDGHNIKD 84
Query: 87 WDIGGQRKIRPYWRNYF 103
+ G R +
Sbjct: 85 FLTGSLRNQIGLVQQDN 101
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of
N-ethylmalemide-sensitive fusion (NSF) protein {Chinese
hamster (Cricetulus griseus) [TaxId: 10029]}
Length = 246
Score = 24.1 bits (51), Expect = 9.6
Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 27 ILKKLRSSPEKELR-ILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQSEGFKLN 85
++++ ++S L +LL G ++GKT + +A E + SE K
Sbjct: 28 LVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQ 87
Query: 86 VWDIGGQRKIRPYWRNYF-DNTDILI 110
+ D+ + L+
Sbjct: 88 AMKKIFDDAYKSQLSCVVVDDIERLL 113
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB
{Thermotoga maritima [TaxId: 2336]}
Length = 238
Score = 24.2 bits (51), Expect = 9.8
Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 14/115 (12%)
Query: 24 LLAILKKLRSSPEKELR----ILLLGLDNAGKTTILKTLASEDISHITPTQGFNIKSVQS 79
+ L + + +LL G GKTT+ +ASE ++I T G +
Sbjct: 17 VKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVKQGD 76
Query: 80 EGFKLNVWDIGGQRKIRPYWRNYFDNTDILIYVIDSADVKRFEESGFELHELLSD 134
L + G + D L ++ E+ F++ ++
Sbjct: 77 MAAILTSLERGDV--------LFIDEIHRLNKAVEELLYSAIED--FQIDIMIGK 121
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.137 0.389
Gapped
Lambda K H
0.267 0.0387 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 581,682
Number of extensions: 26136
Number of successful extensions: 296
Number of sequences better than 10.0: 1
Number of HSP's gapped: 276
Number of HSP's successfully gapped: 173
Length of query: 162
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 83
Effective length of database: 1,322,926
Effective search space: 109802858
Effective search space used: 109802858
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.6 bits)