Query psy6892
Match_columns 190
No_of_seqs 310 out of 1606
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 21:08:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6892.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6892hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 99.5 2.5E-15 8.4E-20 132.5 2.4 93 10-102 28-128 (510)
2 2lnl_A C-X-C chemokine recepto 99.5 1.3E-14 4.4E-19 118.3 2.8 81 10-92 7-87 (296)
3 2rh1_A Beta-2-adrenergic recep 99.5 8.3E-15 2.8E-19 128.5 1.0 81 12-92 38-118 (500)
4 3uon_A Human M2 muscarinic ace 99.5 8.5E-15 2.9E-19 125.7 1.0 83 12-94 21-103 (467)
5 4dkl_A MU-type opioid receptor 99.4 1.5E-14 5.1E-19 123.9 2.0 84 10-94 13-96 (464)
6 3v2y_A Sphingosine 1-phosphate 99.4 3E-14 1E-18 125.7 2.8 76 15-91 64-139 (520)
7 2ks9_A Substance-P receptor; w 99.4 2.9E-14 9.9E-19 119.0 2.6 80 15-94 33-112 (364)
8 3vw7_A Proteinase-activated re 99.4 7.2E-15 2.5E-19 126.9 -1.5 85 10-94 16-100 (484)
9 1u19_A Rhodopsin; G protein-co 99.4 3.4E-14 1.2E-18 117.4 2.4 82 13-94 37-118 (349)
10 3rze_A Histamine H1 receptor, 99.4 8.1E-15 2.8E-19 125.4 -1.5 83 12-94 6-88 (452)
11 4ea3_A Fusion protein of nocic 99.4 2.6E-14 8.8E-19 123.0 1.3 88 7-95 118-205 (434)
12 4amj_A Beta-1 adrenergic recep 99.4 1.8E-14 6E-19 117.1 -0.8 84 11-94 8-91 (315)
13 3sn6_R Lysozyme, beta-2 adrene 99.4 4.4E-14 1.5E-18 124.2 1.1 85 10-94 178-262 (514)
14 3pbl_A D(3) dopamine receptor, 99.4 3.1E-14 1.1E-18 122.8 -1.0 80 14-93 38-118 (481)
15 3odu_A C-X-C chemokine recepto 99.4 9.9E-14 3.4E-18 120.3 2.0 82 11-94 45-126 (502)
16 3eml_A Human adenosine A2A rec 99.3 1E-13 3.5E-18 119.5 0.6 79 13-93 20-98 (488)
17 2z73_A Rhodopsin; visual pigme 99.3 2E-13 7E-18 117.4 2.1 82 14-95 34-116 (448)
18 4eiy_A Adenosine receptor A2A/ 99.3 1.3E-13 4.5E-18 117.6 0.9 79 13-93 30-108 (447)
19 2lot_A Apelin receptor; membra 97.3 1.3E-05 4.5E-10 51.3 -2.2 31 16-46 30-60 (64)
20 3arc_I Photosystem II reaction 61.1 6.5 0.00022 21.8 2.3 20 15-34 9-28 (38)
21 2l2t_A Receptor tyrosine-prote 46.6 9.9 0.00034 21.9 1.6 11 34-44 28-38 (44)
22 1zza_A Stannin, AG8_1; helix, 27.9 42 0.0014 21.5 2.5 9 7-15 5-13 (90)
23 4fc4_A Nitrite transporter NIR 24.5 26 0.0009 27.9 1.3 38 21-58 150-187 (261)
24 2ks1_B Epidermal growth factor 21.4 18 0.00061 20.8 -0.2 9 36-44 31-39 (44)
25 2klu_A T-cell surface glycopro 20.9 28 0.00097 21.8 0.6 23 22-44 16-38 (70)
26 3um7_A Potassium channel subfa 20.3 47 0.0016 27.1 2.0 8 3-10 128-135 (309)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.51 E-value=2.5e-15 Score=132.50 Aligned_cols=93 Identities=23% Similarity=0.288 Sum_probs=72.0
Q ss_pred CchhhHHHHHHHHHHHHhhhccchheeeeeeccCCC---CchhHHHHHHHHHHHHHHhhhhcccceeeecc--ccccccc
Q psy6892 10 DAASWNIWAVVTLILVFCTATGNILVCLAISWEKRL---QNVTNYFLMSLAITDLMVAVLVMPLGILTLVR--VRTNLSG 84 (190)
Q Consensus 10 ~~~~~~~~~v~~~ii~vlgi~gN~lvi~vi~~~~~L---~~~~~~fl~nLAvaDLl~~l~~lP~~l~~~l~--~~~~~s~ 84 (190)
....+.++.++|++++++|++||++||+++++++++ |+++|+||+|||++||+++++++|+.++.++. +.|.++.
T Consensus 28 ~~~~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~ 107 (510)
T 4grv_A 28 DIYSKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGD 107 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhH
Confidence 334456778889999999999999999999887654 47899999999999999999999998876553 5699999
Q ss_pred ccceeeccc---hhhhhhhhh
Q psy6892 85 AVLRLKKNI---LCENQLFKA 102 (190)
Q Consensus 85 ~lC~i~~~i---~c~~slfSl 102 (190)
.+|++.+++ .+.++++++
T Consensus 108 ~~C~~~~~~~~~~~~~S~~~l 128 (510)
T 4grv_A 108 AGCRGYYFLRDACTYATALNV 128 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999986543 334444443
No 2
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.46 E-value=1.3e-14 Score=118.30 Aligned_cols=81 Identities=20% Similarity=0.295 Sum_probs=67.7
Q ss_pred CchhhHHHHHHHHHHHHhhhccchheeeeeeccCCCCchhHHHHHHHHHHHHHHhhhhcccceeeeccccccccccccee
Q psy6892 10 DAASWNIWAVVTLILVFCTATGNILVCLAISWEKRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVRVRTNLSGAVLRL 89 (190)
Q Consensus 10 ~~~~~~~~~v~~~ii~vlgi~gN~lvi~vi~~~~~L~~~~~~fl~nLAvaDLl~~l~~lP~~l~~~l~~~~~~s~~lC~i 89 (190)
....+.++.++|++++++|++||++|++++.++|++|+++|+|++|||++|+++++ .+|..+.... ..|.++..+|++
T Consensus 7 ~~~~~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l-~~p~~~~~~~-~~~~~~~~~c~~ 84 (296)
T 2lnl_A 7 ETLNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL-TLPIWAASKV-NGWIFGTFLCKV 84 (296)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHH-HHHHHHHHHH-SSSCCSSHHHHH
T ss_pred cchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHH-hhhHHHhhcc-CCCccchhHHHH
Confidence 34456778889999999999999999999999999999999999999999999975 4565555443 468899999987
Q ss_pred ecc
Q psy6892 90 KKN 92 (190)
Q Consensus 90 ~~~ 92 (190)
.++
T Consensus 85 ~~~ 87 (296)
T 2lnl_A 85 VSL 87 (296)
T ss_dssp HHH
T ss_pred Hhh
Confidence 653
No 3
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.45 E-value=8.3e-15 Score=128.49 Aligned_cols=81 Identities=30% Similarity=0.375 Sum_probs=72.9
Q ss_pred hhhHHHHHHHHHHHHhhhccchheeeeeeccCCCCchhHHHHHHHHHHHHHHhhhhcccceeeecccccccccccceeec
Q psy6892 12 ASWNIWAVVTLILVFCTATGNILVCLAISWEKRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVRVRTNLSGAVLRLKK 91 (190)
Q Consensus 12 ~~~~~~~v~~~ii~vlgi~gN~lvi~vi~~~~~L~~~~~~fl~nLAvaDLl~~l~~lP~~l~~~l~~~~~~s~~lC~i~~ 91 (190)
....++.+++++++++|++||++|++++++++++|+++|+|++|||++|++++++.+|+.+..++.+.|.++..+|++.+
T Consensus 38 ~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~~~~C~~~~ 117 (500)
T 2rh1_A 38 VWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWT 117 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCcchhhHHH
Confidence 34566778899999999999999999999999999999999999999999999999999988888888999999998764
Q ss_pred c
Q psy6892 92 N 92 (190)
Q Consensus 92 ~ 92 (190)
+
T Consensus 118 ~ 118 (500)
T 2rh1_A 118 S 118 (500)
T ss_dssp H
T ss_pred H
Confidence 3
No 4
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.45 E-value=8.5e-15 Score=125.74 Aligned_cols=83 Identities=35% Similarity=0.350 Sum_probs=74.6
Q ss_pred hhhHHHHHHHHHHHHhhhccchheeeeeeccCCCCchhHHHHHHHHHHHHHHhhhhcccceeeecccccccccccceeec
Q psy6892 12 ASWNIWAVVTLILVFCTATGNILVCLAISWEKRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVRVRTNLSGAVLRLKK 91 (190)
Q Consensus 12 ~~~~~~~v~~~ii~vlgi~gN~lvi~vi~~~~~L~~~~~~fl~nLAvaDLl~~l~~lP~~l~~~l~~~~~~s~~lC~i~~ 91 (190)
....++.+++++++++|++||+++++++++++++|+++|+|++|||++|++++++.+|+.+...+.+.|.++..+|++.+
T Consensus 21 ~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 100 (467)
T 3uon_A 21 FEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWL 100 (467)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcchHhHHH
Confidence 34567888899999999999999999999999999999999999999999999999999998888889999999999865
Q ss_pred cch
Q psy6892 92 NIL 94 (190)
Q Consensus 92 ~i~ 94 (190)
++.
T Consensus 101 ~~~ 103 (467)
T 3uon_A 101 ALD 103 (467)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 5
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.45 E-value=1.5e-14 Score=123.94 Aligned_cols=84 Identities=15% Similarity=0.220 Sum_probs=73.8
Q ss_pred CchhhHHHHHHHHHHHHhhhccchheeeeeeccCCCCchhHHHHHHHHHHHHHHhhhhcccceeeeccccccccccccee
Q psy6892 10 DAASWNIWAVVTLILVFCTATGNILVCLAISWEKRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVRVRTNLSGAVLRL 89 (190)
Q Consensus 10 ~~~~~~~~~v~~~ii~vlgi~gN~lvi~vi~~~~~L~~~~~~fl~nLAvaDLl~~l~~lP~~l~~~l~~~~~~s~~lC~i 89 (190)
+.....++++++++++++|++||+++++++++++++|+++|+|++|||++|++++++ +|+.+..++.+.|.++..+|++
T Consensus 13 ~~~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~~~~~~~~~C~~ 91 (464)
T 4dkl_A 13 SMVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLMGTWPFGNILCKI 91 (464)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSCCSCSHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcccccchhhh
Confidence 344567888899999999999999999999999999999999999999999999876 8988888888899999999998
Q ss_pred eccch
Q psy6892 90 KKNIL 94 (190)
Q Consensus 90 ~~~i~ 94 (190)
.+++.
T Consensus 92 ~~~~~ 96 (464)
T 4dkl_A 92 VISID 96 (464)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65443
No 6
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.43 E-value=3e-14 Score=125.73 Aligned_cols=76 Identities=25% Similarity=0.314 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHhhhccchheeeeeeccCCCCchhHHHHHHHHHHHHHHhhhhcccceeeecccccccccccceeec
Q psy6892 15 NIWAVVTLILVFCTATGNILVCLAISWEKRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVRVRTNLSGAVLRLKK 91 (190)
Q Consensus 15 ~~~~v~~~ii~vlgi~gN~lvi~vi~~~~~L~~~~~~fl~nLAvaDLl~~l~~lP~~l~~~l~~~~~~s~~lC~i~~ 91 (190)
.++.+++++++++|++||++||+++++++++|+++|+|++|||++||+++++.+|+.+.. ....|.++...|++..
T Consensus 64 ~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~~~~~~~~~c~~~~ 139 (520)
T 3v2y_A 64 KLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS-GATTYKLTPAQWFLRE 139 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGGTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc-cccceeeCccccchHH
Confidence 677889999999999999999999999999999999999999999999999988887766 5667888888888754
No 7
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.43 E-value=2.9e-14 Score=118.97 Aligned_cols=80 Identities=24% Similarity=0.343 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHhhhccchheeeeeeccCCCCchhHHHHHHHHHHHHHHhhhhcccceeeecccccccccccceeeccch
Q psy6892 15 NIWAVVTLILVFCTATGNILVCLAISWEKRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVRVRTNLSGAVLRLKKNIL 94 (190)
Q Consensus 15 ~~~~v~~~ii~vlgi~gN~lvi~vi~~~~~L~~~~~~fl~nLAvaDLl~~l~~lP~~l~~~l~~~~~~s~~lC~i~~~i~ 94 (190)
.++.+++++++++|++||+++++++++++++|+++|+|++|||++|++++++.+|+.+...+.+.|.++..+|++.+++.
T Consensus 33 ~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~ 112 (364)
T 2ks9_A 33 VLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFP 112 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhHHHHH
Confidence 44578899999999999999999999999999999999999999999999989998887777788999999998865433
No 8
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.42 E-value=7.2e-15 Score=126.91 Aligned_cols=85 Identities=8% Similarity=0.043 Sum_probs=69.7
Q ss_pred CchhhHHHHHHHHHHHHhhhccchheeeeeeccCCCCchhHHHHHHHHHHHHHHhhhhcccceeeeccccccccccccee
Q psy6892 10 DAASWNIWAVVTLILVFCTATGNILVCLAISWEKRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVRVRTNLSGAVLRL 89 (190)
Q Consensus 10 ~~~~~~~~~v~~~ii~vlgi~gN~lvi~vi~~~~~L~~~~~~fl~nLAvaDLl~~l~~lP~~l~~~l~~~~~~s~~lC~i 89 (190)
.+..+.++++++++++++|++||+++++++++++++|+++|+|++|||++|++++++..|..+..+..+.|.++..+|++
T Consensus 16 ~~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~~~~~~~~~~~~~~~~~~~~~C~~ 95 (484)
T 3vw7_A 16 SSWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSVLPFKISYYFSGSDWQFGSELCRF 95 (484)
T ss_dssp CHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTSCCCSCHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhHHhH
Confidence 44556788889999999999999999999999999999999999999999999976544444444445589999999988
Q ss_pred eccch
Q psy6892 90 KKNIL 94 (190)
Q Consensus 90 ~~~i~ 94 (190)
.+++.
T Consensus 96 ~~~~~ 100 (484)
T 3vw7_A 96 VTAAF 100 (484)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65433
No 9
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.42 E-value=3.4e-14 Score=117.37 Aligned_cols=82 Identities=18% Similarity=0.212 Sum_probs=72.5
Q ss_pred hhHHHHHHHHHHHHhhhccchheeeeeeccCCCCchhHHHHHHHHHHHHHHhhhhcccceeeecccccccccccceeecc
Q psy6892 13 SWNIWAVVTLILVFCTATGNILVCLAISWEKRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVRVRTNLSGAVLRLKKN 92 (190)
Q Consensus 13 ~~~~~~v~~~ii~vlgi~gN~lvi~vi~~~~~L~~~~~~fl~nLAvaDLl~~l~~lP~~l~~~l~~~~~~s~~lC~i~~~ 92 (190)
...++.+++++++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|..+...+.+.|.++..+|++.++
T Consensus 37 ~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~ 116 (349)
T 1u19_A 37 QFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGF 116 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCChhHHHHHHH
Confidence 35577788899999999999999999999999999999999999999999999999988887777889999899987654
Q ss_pred ch
Q psy6892 93 IL 94 (190)
Q Consensus 93 i~ 94 (190)
+.
T Consensus 117 ~~ 118 (349)
T 1u19_A 117 FA 118 (349)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 10
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.42 E-value=8.1e-15 Score=125.37 Aligned_cols=83 Identities=28% Similarity=0.392 Sum_probs=72.8
Q ss_pred hhhHHHHHHHHHHHHhhhccchheeeeeeccCCCCchhHHHHHHHHHHHHHHhhhhcccceeeecccccccccccceeec
Q psy6892 12 ASWNIWAVVTLILVFCTATGNILVCLAISWEKRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVRVRTNLSGAVLRLKK 91 (190)
Q Consensus 12 ~~~~~~~v~~~ii~vlgi~gN~lvi~vi~~~~~L~~~~~~fl~nLAvaDLl~~l~~lP~~l~~~l~~~~~~s~~lC~i~~ 91 (190)
....++++++++++++|++||+++++++++++++|+++|+|++|||++|++++++.+|+.+..++.+.|.++..+|++.+
T Consensus 6 ~~~~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 85 (452)
T 3rze_A 6 PQLMPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWL 85 (452)
T ss_dssp ---CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHhHHH
Confidence 34456678899999999999999999999999999999999999999999999999999999888889999999999865
Q ss_pred cch
Q psy6892 92 NIL 94 (190)
Q Consensus 92 ~i~ 94 (190)
++.
T Consensus 86 ~~~ 88 (452)
T 3rze_A 86 SMD 88 (452)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 11
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.41 E-value=2.6e-14 Score=122.99 Aligned_cols=88 Identities=19% Similarity=0.176 Sum_probs=74.8
Q ss_pred CCCCchhhHHHHHHHHHHHHhhhccchheeeeeeccCCCCchhHHHHHHHHHHHHHHhhhhcccceeeeccccccccccc
Q psy6892 7 FGLDAASWNIWAVVTLILVFCTATGNILVCLAISWEKRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVRVRTNLSGAV 86 (190)
Q Consensus 7 ~~~~~~~~~~~~v~~~ii~vlgi~gN~lvi~vi~~~~~L~~~~~~fl~nLAvaDLl~~l~~lP~~l~~~l~~~~~~s~~l 86 (190)
+...+..+.++++++++++++|++||+++++++++++++|+++|+|++|||++|+++ ++.+|+.+..++.+.|.++..+
T Consensus 118 ~~~~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~~~~~~~~~ 196 (434)
T 4ea3_A 118 AFLPLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILLGFWPFGNAL 196 (434)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHTSCTTHHHH
T ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHhcCCcCcccH
Confidence 333556677888899999999999999999999999999999999999999999998 6788988888888889999999
Q ss_pred ceeeccchh
Q psy6892 87 LRLKKNILC 95 (190)
Q Consensus 87 C~i~~~i~c 95 (190)
|++.+++..
T Consensus 197 C~~~~~~~~ 205 (434)
T 4ea3_A 197 CKTVIAIDY 205 (434)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 998654443
No 12
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.40 E-value=1.8e-14 Score=117.14 Aligned_cols=84 Identities=31% Similarity=0.378 Sum_probs=74.8
Q ss_pred chhhHHHHHHHHHHHHhhhccchheeeeeeccCCCCchhHHHHHHHHHHHHHHhhhhcccceeeecccccccccccceee
Q psy6892 11 AASWNIWAVVTLILVFCTATGNILVCLAISWEKRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVRVRTNLSGAVLRLK 90 (190)
Q Consensus 11 ~~~~~~~~v~~~ii~vlgi~gN~lvi~vi~~~~~L~~~~~~fl~nLAvaDLl~~l~~lP~~l~~~l~~~~~~s~~lC~i~ 90 (190)
+..+.++.+++++++++|++||+++++++++++++|+++|+|++|||++|++++++.+|+.+...+.+.|.++..+|++.
T Consensus 8 ~~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 87 (315)
T 4amj_A 8 QQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELW 87 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccccHHHHH
Confidence 34566778889999999999999999999999999999999999999999999988999988888888899999999986
Q ss_pred ccch
Q psy6892 91 KNIL 94 (190)
Q Consensus 91 ~~i~ 94 (190)
+++.
T Consensus 88 ~~~~ 91 (315)
T 4amj_A 88 TSLD 91 (315)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 13
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.39 E-value=4.4e-14 Score=124.16 Aligned_cols=85 Identities=31% Similarity=0.387 Sum_probs=75.3
Q ss_pred CchhhHHHHHHHHHHHHhhhccchheeeeeeccCCCCchhHHHHHHHHHHHHHHhhhhcccceeeeccccccccccccee
Q psy6892 10 DAASWNIWAVVTLILVFCTATGNILVCLAISWEKRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVRVRTNLSGAVLRL 89 (190)
Q Consensus 10 ~~~~~~~~~v~~~ii~vlgi~gN~lvi~vi~~~~~L~~~~~~fl~nLAvaDLl~~l~~lP~~l~~~l~~~~~~s~~lC~i 89 (190)
.+....++.+++++++++|++||++|++++++++++|+++|+|++|||++|++++++.+|+.+..++.+.|.++..+|++
T Consensus 178 ~~~~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~ 257 (514)
T 3sn6_R 178 DEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEF 257 (514)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCSHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCcchhhh
Confidence 44456677889999999999999999999999999999999999999999999999999999888888899999999998
Q ss_pred eccch
Q psy6892 90 KKNIL 94 (190)
Q Consensus 90 ~~~i~ 94 (190)
.+++.
T Consensus 258 ~~~l~ 262 (514)
T 3sn6_R 258 WTSID 262 (514)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65443
No 14
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.37 E-value=3.1e-14 Score=122.83 Aligned_cols=80 Identities=35% Similarity=0.463 Sum_probs=68.5
Q ss_pred hHHHHHHHHHHHHhhhccchheeeeeeccCCCCchhHHHHHHHHHHHHHHhhhhcccceeeecc-cccccccccceeecc
Q psy6892 14 WNIWAVVTLILVFCTATGNILVCLAISWEKRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVR-VRTNLSGAVLRLKKN 92 (190)
Q Consensus 14 ~~~~~v~~~ii~vlgi~gN~lvi~vi~~~~~L~~~~~~fl~nLAvaDLl~~l~~lP~~l~~~l~-~~~~~s~~lC~i~~~ 92 (190)
+.++++++++++++|++||++|++++++++++|+++|+|++|||++|++++++.+|+.+...+. +.|.++..+|++.++
T Consensus 38 ~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~ 117 (481)
T 3pbl_A 38 HAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFVT 117 (481)
T ss_dssp ---CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchhhhHHH
Confidence 4566678899999999999999999999999999999999999999999999999988876655 668899999988654
Q ss_pred c
Q psy6892 93 I 93 (190)
Q Consensus 93 i 93 (190)
+
T Consensus 118 ~ 118 (481)
T 3pbl_A 118 L 118 (481)
T ss_dssp H
T ss_pred H
Confidence 3
No 15
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.37 E-value=9.9e-14 Score=120.25 Aligned_cols=82 Identities=18% Similarity=0.318 Sum_probs=69.8
Q ss_pred chhhHHHHHHHHHHHHhhhccchheeeeeeccCCCCchhHHHHHHHHHHHHHHhhhhcccceeeecccccccccccceee
Q psy6892 11 AASWNIWAVVTLILVFCTATGNILVCLAISWEKRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVRVRTNLSGAVLRLK 90 (190)
Q Consensus 11 ~~~~~~~~v~~~ii~vlgi~gN~lvi~vi~~~~~L~~~~~~fl~nLAvaDLl~~l~~lP~~l~~~l~~~~~~s~~lC~i~ 90 (190)
...+.++.+++++++++|++||++|++++++++++|+++|+|++|||++|++++ +.+|+.+..++. .|.++..+|++.
T Consensus 45 ~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~~-~~~~~~~~C~~~ 122 (502)
T 3odu_A 45 NFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAVA-NWYFGNFLCKAV 122 (502)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHHT-CCCSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHhc-CCcCCchhhhhH
Confidence 344677888999999999999999999999999999999999999999999995 678887766554 688888889886
Q ss_pred ccch
Q psy6892 91 KNIL 94 (190)
Q Consensus 91 ~~i~ 94 (190)
+++.
T Consensus 123 ~~~~ 126 (502)
T 3odu_A 123 HVIY 126 (502)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5433
No 16
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.35 E-value=1e-13 Score=119.46 Aligned_cols=79 Identities=32% Similarity=0.452 Sum_probs=68.2
Q ss_pred hhHHHHHHHHHHHHhhhccchheeeeeeccCCCCchhHHHHHHHHHHHHHHhhhhcccceeeecccccccccccceeecc
Q psy6892 13 SWNIWAVVTLILVFCTATGNILVCLAISWEKRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVRVRTNLSGAVLRLKKN 92 (190)
Q Consensus 13 ~~~~~~v~~~ii~vlgi~gN~lvi~vi~~~~~L~~~~~~fl~nLAvaDLl~~l~~lP~~l~~~l~~~~~~s~~lC~i~~~ 92 (190)
...++++++++++++|++||+++++++++++++|+++|+|++|||++|++++++.+|+.+.... .|.++..+|++.++
T Consensus 20 ~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~--~~~~~~~~C~~~~~ 97 (488)
T 3eml_A 20 GSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST--GFCAACHGCLFIAC 97 (488)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHTT--CCEECHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cccccchHHHHHHH
Confidence 3567888999999999999999999999999999999999999999999999999998776443 57777788887654
Q ss_pred c
Q psy6892 93 I 93 (190)
Q Consensus 93 i 93 (190)
+
T Consensus 98 ~ 98 (488)
T 3eml_A 98 F 98 (488)
T ss_dssp H
T ss_pred H
Confidence 3
No 17
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.34 E-value=2e-13 Score=117.42 Aligned_cols=82 Identities=20% Similarity=0.193 Sum_probs=71.0
Q ss_pred hHHHHHHHHHHHHhhhccchheeeeeeccCCCCchhHHHHHHHHHHHHHHhhhh-cccceeeecccccccccccceeecc
Q psy6892 14 WNIWAVVTLILVFCTATGNILVCLAISWEKRLQNVTNYFLMSLAITDLMVAVLV-MPLGILTLVRVRTNLSGAVLRLKKN 92 (190)
Q Consensus 14 ~~~~~v~~~ii~vlgi~gN~lvi~vi~~~~~L~~~~~~fl~nLAvaDLl~~l~~-lP~~l~~~l~~~~~~s~~lC~i~~~ 92 (190)
..++.+++++++++|++||+++++++++++++|+++|+|++|||++|++++++. +|+.+...+.+.|.++..+|++.++
T Consensus 34 ~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~ 113 (448)
T 2z73_A 34 YYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGF 113 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCCHHHHHHHHH
Confidence 456677888999999999999999999999999999999999999999998774 8888877777889889899988654
Q ss_pred chh
Q psy6892 93 ILC 95 (190)
Q Consensus 93 i~c 95 (190)
+.+
T Consensus 114 ~~~ 116 (448)
T 2z73_A 114 IGG 116 (448)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 18
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.34 E-value=1.3e-13 Score=117.62 Aligned_cols=79 Identities=32% Similarity=0.452 Sum_probs=66.9
Q ss_pred hhHHHHHHHHHHHHhhhccchheeeeeeccCCCCchhHHHHHHHHHHHHHHhhhhcccceeeecccccccccccceeecc
Q psy6892 13 SWNIWAVVTLILVFCTATGNILVCLAISWEKRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVRVRTNLSGAVLRLKKN 92 (190)
Q Consensus 13 ~~~~~~v~~~ii~vlgi~gN~lvi~vi~~~~~L~~~~~~fl~nLAvaDLl~~l~~lP~~l~~~l~~~~~~s~~lC~i~~~ 92 (190)
...++++++++++++|++||+++++++++++++|+++|+|++|||++|++++++.+|+.+... ..|.++..+|++.++
T Consensus 30 ~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~--~~~~~~~~~C~~~~~ 107 (447)
T 4eiy_A 30 GSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFCAACHGCLFIAC 107 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHH--TTCEEEHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccccCccHHHHHHH
Confidence 445777888999999999999999999999999999999999999999999999999877633 356667778887654
Q ss_pred c
Q psy6892 93 I 93 (190)
Q Consensus 93 i 93 (190)
+
T Consensus 108 ~ 108 (447)
T 4eiy_A 108 F 108 (447)
T ss_dssp H
T ss_pred H
Confidence 3
No 19
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=97.27 E-value=1.3e-05 Score=51.32 Aligned_cols=31 Identities=19% Similarity=0.278 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHhhhccchheeeeeeccCCCC
Q psy6892 16 IWAVVTLILVFCTATGNILVCLAISWEKRLQ 46 (190)
Q Consensus 16 ~~~v~~~ii~vlgi~gN~lvi~vi~~~~~L~ 46 (190)
++.++|++++++|++||++|+|++++++.-|
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~~~ 60 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKGHH 60 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSSSC
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEecccc
Confidence 5678899999999999999999988776543
No 20
>3arc_I Photosystem II reaction center protein I; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_I* 2axt_I* 3bz1_I* 3bz2_I* 3kzi_I* 3prq_I* 3prr_I* 3a0b_I* 3a0h_I*
Probab=61.08 E-value=6.5 Score=21.78 Aligned_cols=20 Identities=10% Similarity=-0.064 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHhhhccchh
Q psy6892 15 NIWAVVTLILVFCTATGNIL 34 (190)
Q Consensus 15 ~~~~v~~~ii~vlgi~gN~l 34 (190)
+.+.++++.++++|.+.|-.
T Consensus 9 y~vV~ffvsLFiFGfLsnDP 28 (38)
T 3arc_I 9 YIVVTFFVLLFVFGFLSGDP 28 (38)
T ss_dssp HHHHHHHHHHHHHHHHTTGG
T ss_pred hhHHHHHHHHHHccccCCCC
Confidence 44566778888889888854
No 21
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=46.64 E-value=9.9 Score=21.92 Aligned_cols=11 Identities=18% Similarity=0.069 Sum_probs=4.8
Q ss_pred heeeeeeccCC
Q psy6892 34 LVCLAISWEKR 44 (190)
Q Consensus 34 lvi~vi~~~~~ 44 (190)
+++++++|+|+
T Consensus 28 ~~~~~~~RRRr 38 (44)
T 2l2t_A 28 LTFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHhhhhh
Confidence 33344444444
No 22
>1zza_A Stannin, AG8_1; helix, membrane protein; NMR {Homo sapiens}
Probab=27.94 E-value=42 Score=21.47 Aligned_cols=9 Identities=0% Similarity=-0.230 Sum_probs=3.4
Q ss_pred CCCCchhhH
Q psy6892 7 FGLDAASWN 15 (190)
Q Consensus 7 ~~~~~~~~~ 15 (190)
+..+.+...
T Consensus 5 i~dhspttg 13 (90)
T 1zza_A 5 IMDHSPTTG 13 (90)
T ss_dssp SCTTTTHHH
T ss_pred eeccCCCcc
Confidence 333333333
No 23
>4fc4_A Nitrite transporter NIRC; alpha-helical inner membrane protein, ION channel, cytoplasm membrane, transport protein; HET: BOG; 2.40A {Salmonella enterica subsp}
Probab=24.53 E-value=26 Score=27.87 Aligned_cols=38 Identities=29% Similarity=0.424 Sum_probs=26.0
Q ss_pred HHHHHHhhhccchheeeeeeccCCCCchhHHHHHHHHH
Q psy6892 21 TLILVFCTATGNILVCLAISWEKRLQNVTNYFLMSLAI 58 (190)
Q Consensus 21 ~~ii~vlgi~gN~lvi~vi~~~~~L~~~~~~fl~nLAv 58 (190)
+..+++.||++|.+|+.+++.....+....++.+-+.+
T Consensus 150 ~~~~f~~gIlcN~lVclaVw~~~~~~~~gKi~~i~~pi 187 (261)
T 4fc4_A 150 ATVLFFKGALCNWLVCLAIWMAIRTEGTAKFLAIWWCL 187 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchhhhhHHHHHH
Confidence 56788999999999998887766554344444444433
No 24
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=21.43 E-value=18 Score=20.78 Aligned_cols=9 Identities=0% Similarity=-0.182 Sum_probs=3.8
Q ss_pred eeeeeccCC
Q psy6892 36 CLAISWEKR 44 (190)
Q Consensus 36 i~vi~~~~~ 44 (190)
+++++|+++
T Consensus 31 ~~~~~RRr~ 39 (44)
T 2ks1_B 31 IGLFMRRRH 39 (44)
T ss_dssp HHHHHHTTT
T ss_pred HHHHhhhhH
Confidence 334444443
No 25
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=20.93 E-value=28 Score=21.84 Aligned_cols=23 Identities=13% Similarity=-0.060 Sum_probs=9.2
Q ss_pred HHHHHhhhccchheeeeeeccCC
Q psy6892 22 LILVFCTATGNILVCLAISWEKR 44 (190)
Q Consensus 22 ~ii~vlgi~gN~lvi~vi~~~~~ 44 (190)
.++.++.++|-.+.+.+-+++++
T Consensus 16 g~~~lll~~glcI~ccvkcrhRr 38 (70)
T 2klu_A 16 GVAGLLLFIGLGIFFSVRSRHRR 38 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCS
T ss_pred HHHHHHHHHHHHHHHhhHHHHHH
Confidence 33334444443343344344333
No 26
>3um7_A Potassium channel subfamily K member 4; potassium ION channel, metal transport; 3.31A {Homo sapiens}
Probab=20.31 E-value=47 Score=27.11 Aligned_cols=8 Identities=25% Similarity=0.488 Sum_probs=4.6
Q ss_pred CCCCCCCC
Q psy6892 3 TEVSFGLD 10 (190)
Q Consensus 3 ~~~~~~~~ 10 (190)
+.+|+++.
T Consensus 128 tTvGYGdi 135 (309)
T 3um7_A 128 TTIGYGNV 135 (309)
T ss_dssp TSCCCCSS
T ss_pred eecccCCC
Confidence 45666663
Done!