BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6893
(988 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9V3P6|PSMD1_DROME 26S proteasome non-ATPase regulatory subunit 1 OS=Drosophila
melanogaster GN=Rpn2 PE=1 SV=1
Length = 1020
Score = 543 bits (1399), Expect = e-153, Method: Compositional matrix adjust.
Identities = 295/521 (56%), Positives = 344/521 (66%), Gaps = 83/521 (15%)
Query: 41 WCLAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGS 100
+ + MS IQ+R FR ++LR LV LY L VPDYVNM QC I+L+DP +VA +L L S
Sbjct: 181 YNVTMSLIQNRGFRNEVLRCLVSLYRDLGVPDYVNMCQCLIFLEDPFAVAEMLDNLTRSS 240
Query: 101 AD-DDLMAAQIGFDLYESATQAFLASVLQELKTCAPIPDATHVVVKVPVEGAPTPATPDT 159
+ ++LMA QI FDLYESATQ FL +VLQ LK APIP A +P P T +
Sbjct: 241 VETNNLMAYQIAFDLYESATQEFLGNVLQHLKNTAPIPTA------LPSTFKPQGTTSED 294
Query: 160 EAPTPAPGTESGPSSTTPGPE----TKTLESLNEKEKQLQARITKLSKILSGEVSIDLHL 215
A + ++S T P +T++SLNE EK Q I KL ILSGEVSIDL L
Sbjct: 295 GAKSEGDKSKSDEDITEETPADDKVERTIDSLNEVEKLHQKNIEKLISILSGEVSIDLQL 354
Query: 216 QFLIRSNKTDMLILKNTKESIRVSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNW 275
QFLIRSN D+ +L+ TKE++RVSICHTAT+IANAFMHSGTTSDQFLRDNL+WLARATNW
Sbjct: 355 QFLIRSNHADLQVLRGTKEAVRVSICHTATVIANAFMHSGTTSDQFLRDNLDWLARATNW 414
Query: 276 AKLTATASLGVIHRGHETEALAHMQSYLPRETGPTSGYYEGGGLYALGLIHANHGAVIND 335
AKLTATASLGVIHRGHE ++LA MQSYLP+E GP+SGY EGG LYALGLIHANHGA I D
Sbjct: 415 AKLTATASLGVIHRGHEKDSLALMQSYLPKEAGPSSGYSEGGALYALGLIHANHGANIID 474
Query: 336 YLLGQVKDATNE--------------------------------DDAVTGEAAGIAMGLV 363
YLL Q+KDA NE DDAVTGEAAGIAMG+V
Sbjct: 475 YLLQQLKDAQNENVRHGGCLGLGLAGMGTHRQDLYEQLKFNLYQDDAVTGEAAGIAMGMV 534
Query: 364 LLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQLENADDLVRDLCEEKDAILR 423
+LGSK+ AI+DMV+YA+ETQHEKILRGLAVGIS M+ +LE AD LV L +KD +LR
Sbjct: 535 MLGSKNAQAIEDMVSYAQETQHEKILRGLAVGISLTMFSRLEEADPLVTSLSSDKDPVLR 594
Query: 424 RSGMYTIAMAYCVSYLYFDLFSDLTYRIVKNRSGMYTIAMAYCGSGSNVATKRLLHVAVS 483
RSG MYTIAMAY G+GSN A ++LLHVAVS
Sbjct: 595 RSG-------------------------------MYTIAMAYNGTGSNKAIRKLLHVAVS 623
Query: 484 DVNDDVRREAVTALGFILFRTLFYVAPACTRSPWPGVISLL 524
DVNDDVRR AVTA+GFILFR+ C P V+SLL
Sbjct: 624 DVNDDVRRAAVTAIGFILFRS----PEQC-----PSVVSLL 655
Score = 471 bits (1211), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/347 (71%), Positives = 275/347 (79%), Gaps = 30/347 (8%)
Query: 550 NEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSICHTATII 609
NE EK Q I KL ILSGEVSIDL LQFLIRSN D+ +L+ TKE++RVSICHTAT+I
Sbjct: 327 NEVEKLHQKNIEKLISILSGEVSIDLQLQFLIRSNHADLQVLRGTKEAVRVSICHTATVI 386
Query: 610 ANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRET 669
ANAFMHSGTTSDQFLRDNL+WLARATNWAKLTATASLGVIHRGHE ++LA MQSYLP+E
Sbjct: 387 ANAFMHSGTTSDQFLRDNLDWLARATNWAKLTATASLGVIHRGHEKDSLALMQSYLPKEA 446
Query: 670 GPTSGYYEGGGLYALGLIHANHGAVINDYLLGQVKDATNEMVRHGGCLGLGLAAMGSARD 729
GP+SGY EGG LYALGLIHANHGA I DYLL Q+KDA NE VRHGGCLGLGLA MG+ R
Sbjct: 447 GPSSGYSEGGALYALGLIHANHGANIIDYLLQQLKDAQNENVRHGGCLGLGLAGMGTHRQ 506
Query: 730 DIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVG 789
D+YEQLKFNLYQDDAVTGEAAGIAMG+V+LGSK+ AI+DMV+YA+ETQHEKILRGLAVG
Sbjct: 507 DLYEQLKFNLYQDDAVTGEAAGIAMGMVMLGSKNAQAIEDMVSYAQETQHEKILRGLAVG 566
Query: 790 ISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAILRRS 849
IS M+ +LE AD LV L +KD +LRRSGMYTIAMAY G+GSN A +
Sbjct: 567 ISLTMFSRLEEADPLVTSLSSDKDPVLRRSGMYTIAMAYNGTGSNKAIR----------- 615
Query: 850 GMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFR 896
+LLHVAVSDVNDDVRR AVTA+GFILFR
Sbjct: 616 -------------------KLLHVAVSDVNDDVRRAAVTAIGFILFR 643
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 29/31 (93%)
Query: 519 GVISLLDDPMIELKEFSLKKLNDIVDDFWPE 549
G+ISLLD+PM +LK F+LKKL++IVD+FWPE
Sbjct: 8 GIISLLDEPMPDLKVFALKKLDNIVDEFWPE 38
>sp|Q5F418|PSMD1_CHICK 26S proteasome non-ATPase regulatory subunit 1 OS=Gallus gallus
GN=PSMD1 PE=2 SV=1
Length = 955
Score = 517 bits (1331), Expect = e-145, Method: Compositional matrix adjust.
Identities = 275/520 (52%), Positives = 344/520 (66%), Gaps = 96/520 (18%)
Query: 43 LAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSAD 102
L MS +Q++ FR ++LR LV++Y +L PD++N+ QC I+LDDP++V+++L KLV D
Sbjct: 183 LCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLV--KED 240
Query: 103 DDLMAAQIGFDLYESATQAFLASVLQELKTCAPIPDATHVVVKVPVEGAP----TPATPD 158
+ LMA QI FDLYESA+Q FL+SV+Q L+T V P+ P T P
Sbjct: 241 NLLMAYQICFDLYESASQQFLSSVIQNLRT-----------VGTPIASVPGSTNTGTVPG 289
Query: 159 TEAPTPAPGTESGPSSTTPGPETKTLESLNEKEKQLQARITKLSKILSGEVSIDLHLQFL 218
+E + A E P ST G + +N + K +I+K+ KILSGE++I+LHLQFL
Sbjct: 290 SEKDSDAMEAEEKPGSTCVGKSAE----INPEPKD---QISKMIKILSGEMAIELHLQFL 342
Query: 219 IRSNKTDMLILKNTKESIRVSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKL 278
IR+N TD++ILKNTK+++R S+CHTAT+IAN+FMH GTTSDQFLRDNLEWLARATNWAK
Sbjct: 343 IRNNNTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKF 402
Query: 279 TATASLGVIHRGHETEALAHMQSYLPRETGPTSGYYEGGGLYALGLIHANHGAVINDYLL 338
TATASLGVIH+GHE EAL M +YLP++T P S Y EGGGLYALGLIHANHG I DYLL
Sbjct: 403 TATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLL 462
Query: 339 GQVKDATN--------------------------------EDDAVTGEAAGIAMGLVLLG 366
Q+K+A+N +DDAVTGEAAG+A+GLV+LG
Sbjct: 463 NQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLG 522
Query: 367 SKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQLENADDLVRDLCEEKDAILRRSG 426
SK+ AI+DMV YA+ETQHEKILRGLAVGI+ +MYG++E AD L+ LC +KD ILRRSG
Sbjct: 523 SKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSG 582
Query: 427 MYTIAMAYCVSYLYFDLFSDLTYRIVKNRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVN 486
M YT+AMAYCGSG+N A +RLLHVAVSDVN
Sbjct: 583 M-------------------------------YTVAMAYCGSGNNKAIRRLLHVAVSDVN 611
Query: 487 DDVRREAVTALGFILFRTLFYVAPACTRSPWPGVISLLDD 526
DDVRR AV +LGFILFRT C P V+SLL +
Sbjct: 612 DDVRRAAVESLGFILFRT----PEQC-----PSVVSLLSE 642
Score = 483 bits (1242), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/338 (68%), Positives = 273/338 (80%), Gaps = 30/338 (8%)
Query: 559 RITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSICHTATIIANAFMHSGT 618
+I+K+ KILSGE++I+LHLQFLIR+N TD++ILKNTK+++R S+CHTAT+IAN+FMH GT
Sbjct: 321 QISKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAVRNSVCHTATVIANSFMHCGT 380
Query: 619 TSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRETGPTSGYYEG 678
TSDQFLRDNLEWLARATNWAK TATASLGVIH+GHE EAL M +YLP++T P S Y EG
Sbjct: 381 TSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEG 440
Query: 679 GGLYALGLIHANHGAVINDYLLGQVKDATNEMVRHGGCLGLGLAAMGSARDDIYEQLKFN 738
GGLYALGLIHANHG I DYLL Q+K+A+N++VRHGG LGLGLAAMG+AR D+Y+ LK N
Sbjct: 441 GGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTN 500
Query: 739 LYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQL 798
LYQDDAVTGEAAG+A+GLV+LGSK+ AI+DMV YA+ETQHEKILRGLAVGI+ +MYG++
Sbjct: 501 LYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRM 560
Query: 799 ENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAILRRSGMYTIAMAY 858
E AD L+ LC +KD ILR RSGMYT+AMAY
Sbjct: 561 EEADALIESLCRDKDPILR------------------------------RSGMYTVAMAY 590
Query: 859 CGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFR 896
CGSG+N A +RLLHVAVSDVNDDVRR AV +LGFILFR
Sbjct: 591 CGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFR 628
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 519 GVISLLDDPMIELKEFSLKKLNDIVDDFWPE 549
G+ISLLD+ +LKEF+L KLN +V+DFW E
Sbjct: 7 GIISLLDEEEPQLKEFALHKLNAVVNDFWAE 37
>sp|Q99460|PSMD1_HUMAN 26S proteasome non-ATPase regulatory subunit 1 OS=Homo sapiens
GN=PSMD1 PE=1 SV=2
Length = 953
Score = 513 bits (1320), Expect = e-144, Method: Compositional matrix adjust.
Identities = 276/520 (53%), Positives = 343/520 (65%), Gaps = 96/520 (18%)
Query: 43 LAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSAD 102
L MS +Q++ FR ++LR LV++Y +L PD++N+ QC I+LDDP++V+++L KLV D
Sbjct: 183 LCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLV--KED 240
Query: 103 DDLMAAQIGFDLYESATQAFLASVLQELKTCAPIPDATHVVVKVPVEGAP----TPATPD 158
+ LMA QI FDLYESA+Q FL+SV+Q L+T V P+ P T P
Sbjct: 241 NLLMAYQICFDLYESASQQFLSSVIQNLRT-----------VGTPIASVPGSTNTGTVPG 289
Query: 159 TEAPTPAPGTESGPSSTTPGPETKTLESLNEKEKQLQARITKLSKILSGEVSIDLHLQFL 218
+E + + TE SS G KT E+ E + Q K+ KILSGE++I+LHLQFL
Sbjct: 290 SEKDSDSMETEEKTSSAFVG---KTPEASPEPKDQ----TLKMIKILSGEMAIELHLQFL 342
Query: 219 IRSNKTDMLILKNTKESIRVSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKL 278
IR+N TD++ILKNTK+++R S+CHTAT+IAN+FMH GTTSDQFLRDNLEWLARATNWAK
Sbjct: 343 IRNNNTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKF 402
Query: 279 TATASLGVIHRGHETEALAHMQSYLPRETGPTSGYYEGGGLYALGLIHANHGAVINDYLL 338
TATASLGVIH+GHE EAL M +YLP++T P S Y EGGGLYALGLIHANHG I DYLL
Sbjct: 403 TATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLL 462
Query: 339 GQVKDATN--------------------------------EDDAVTGEAAGIAMGLVLLG 366
Q+K+A+N +DDAVTGEAAG+A+GLV+LG
Sbjct: 463 NQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLG 522
Query: 367 SKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQLENADDLVRDLCEEKDAILRRSG 426
SK+ AI+DMV YA+ETQHEKILRGLAVGI+ +MYG++E AD L+ LC +KD ILRRSG
Sbjct: 523 SKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSG 582
Query: 427 MYTIAMAYCVSYLYFDLFSDLTYRIVKNRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVN 486
M YT+AMAYCGSG+N A +RLLHVAVSDVN
Sbjct: 583 M-------------------------------YTVAMAYCGSGNNKAIRRLLHVAVSDVN 611
Query: 487 DDVRREAVTALGFILFRTLFYVAPACTRSPWPGVISLLDD 526
DDVRR AV +LGFILFRT C P V+SLL +
Sbjct: 612 DDVRRAAVESLGFILFRT----PEQC-----PSVVSLLSE 642
Score = 481 bits (1238), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/349 (66%), Positives = 275/349 (78%), Gaps = 32/349 (9%)
Query: 548 PENEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSICHTAT 607
PE E + Q K+ KILSGE++I+LHLQFLIR+N TD++ILKNTK+++R S+CHTAT
Sbjct: 312 PEASPEPKDQT--LKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAVRNSVCHTAT 369
Query: 608 IIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPR 667
+IAN+FMH GTTSDQFLRDNLEWLARATNWAK TATASLGVIH+GHE EAL M +YLP+
Sbjct: 370 VIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPK 429
Query: 668 ETGPTSGYYEGGGLYALGLIHANHGAVINDYLLGQVKDATNEMVRHGGCLGLGLAAMGSA 727
+T P S Y EGGGLYALGLIHANHG I DYLL Q+K+A+N++VRHGG LGLGLAAMG+A
Sbjct: 430 DTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTA 489
Query: 728 RDDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLA 787
R D+Y+ LK NLYQDDAVTGEAAG+A+GLV+LGSK+ AI+DMV YA+ETQHEKILRGLA
Sbjct: 490 RQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLA 549
Query: 788 VGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAILR 847
VGI+ +MYG++E AD L+ LC +KD ILR
Sbjct: 550 VGIALVMYGRMEEADALIESLCRDKDPILR------------------------------ 579
Query: 848 RSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFR 896
RSGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV +LGFILFR
Sbjct: 580 RSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFR 628
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 519 GVISLLDDPMIELKEFSLKKLNDIVDDFWPE 549
G+ISLLD+ +LKEF+L KLN +V+DFW E
Sbjct: 7 GIISLLDEDEPQLKEFALHKLNAVVNDFWAE 37
>sp|Q5R5S4|PSMD1_PONAB 26S proteasome non-ATPase regulatory subunit 1 OS=Pongo abelii
GN=PSMD1 PE=2 SV=1
Length = 953
Score = 511 bits (1316), Expect = e-143, Method: Compositional matrix adjust.
Identities = 273/522 (52%), Positives = 340/522 (65%), Gaps = 100/522 (19%)
Query: 43 LAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSAD 102
L MS +Q++ FR ++LR LV++Y +L PD++N+ QC I+LDDP++V+++L KLV D
Sbjct: 183 LCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLV--KED 240
Query: 103 DDLMAAQIGFDLYESATQAFLASVLQELKTCAPIPDATHVVVKVPVEGAPTPATPDTEAP 162
+ LMA QI FDLYESA+Q FL+SV+Q L+T G P + P +
Sbjct: 241 NLLMAYQICFDLYESASQQFLSSVIQNLRTV----------------GTPIASVPGSTNT 284
Query: 163 TPAPGTESGPSSTTPGPET------KTLESLNEKEKQLQARITKLSKILSGEVSIDLHLQ 216
PG+E S +T KT E+ E + Q K+ KILSGE++I+LHLQ
Sbjct: 285 GTVPGSEKDSDSMETEEKTGSAFVGKTPEASPEPKDQ----TLKMIKILSGEMAIELHLQ 340
Query: 217 FLIRSNKTDMLILKNTKESIRVSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNWA 276
FLIR+N TD++ILKNTK+++R S+CHTAT+IAN+FMH GTTSDQFLRDNLEWLARATNWA
Sbjct: 341 FLIRNNNTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWA 400
Query: 277 KLTATASLGVIHRGHETEALAHMQSYLPRETGPTSGYYEGGGLYALGLIHANHGAVINDY 336
K TATASLGVIH+GHE EAL M +YLP++T P S Y EGGGLYALGLIHANHG I DY
Sbjct: 401 KFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDY 460
Query: 337 LLGQVKDATN--------------------------------EDDAVTGEAAGIAMGLVL 364
LL Q+K+A+N +DDAVTGEAAG+A+GLV+
Sbjct: 461 LLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVM 520
Query: 365 LGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQLENADDLVRDLCEEKDAILRR 424
LGSK+ AI+DMV YA+ETQHEKILRGLAVGI+ +MYG++E AD L+ LC +KD ILRR
Sbjct: 521 LGSKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRR 580
Query: 425 SGMYTIAMAYCVSYLYFDLFSDLTYRIVKNRSGMYTIAMAYCGSGSNVATKRLLHVAVSD 484
SGM YT+AMAYCGSG+N A +RLLHVAVSD
Sbjct: 581 SGM-------------------------------YTVAMAYCGSGNNKAIRRLLHVAVSD 609
Query: 485 VNDDVRREAVTALGFILFRTLFYVAPACTRSPWPGVISLLDD 526
VNDDVRR AV +LGFILFRT C P V+SLL +
Sbjct: 610 VNDDVRRAAVESLGFILFRT----PEQC-----PSVVSLLSE 642
Score = 481 bits (1238), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/349 (66%), Positives = 275/349 (78%), Gaps = 32/349 (9%)
Query: 548 PENEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSICHTAT 607
PE E + Q K+ KILSGE++I+LHLQFLIR+N TD++ILKNTK+++R S+CHTAT
Sbjct: 312 PEASPEPKDQT--LKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAVRNSVCHTAT 369
Query: 608 IIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPR 667
+IAN+FMH GTTSDQFLRDNLEWLARATNWAK TATASLGVIH+GHE EAL M +YLP+
Sbjct: 370 VIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPK 429
Query: 668 ETGPTSGYYEGGGLYALGLIHANHGAVINDYLLGQVKDATNEMVRHGGCLGLGLAAMGSA 727
+T P S Y EGGGLYALGLIHANHG I DYLL Q+K+A+N++VRHGG LGLGLAAMG+A
Sbjct: 430 DTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTA 489
Query: 728 RDDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLA 787
R D+Y+ LK NLYQDDAVTGEAAG+A+GLV+LGSK+ AI+DMV YA+ETQHEKILRGLA
Sbjct: 490 RQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLA 549
Query: 788 VGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAILR 847
VGI+ +MYG++E AD L+ LC +KD ILR
Sbjct: 550 VGIALVMYGRMEEADALIESLCRDKDPILR------------------------------ 579
Query: 848 RSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFR 896
RSGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV +LGFILFR
Sbjct: 580 RSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFR 628
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 519 GVISLLDDPMIELKEFSLKKLNDIVDDFWPE 549
G+ISLLD+ +LKEF+L KLN +V+DFW E
Sbjct: 7 GIISLLDEDEPQLKEFALHKLNAVVNDFWAE 37
>sp|Q3TXS7|PSMD1_MOUSE 26S proteasome non-ATPase regulatory subunit 1 OS=Mus musculus
GN=Psmd1 PE=1 SV=1
Length = 953
Score = 511 bits (1316), Expect = e-143, Method: Compositional matrix adjust.
Identities = 269/518 (51%), Positives = 338/518 (65%), Gaps = 92/518 (17%)
Query: 43 LAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSAD 102
L MS +Q++ FR ++LR LV++Y +L PD++N+ QC I+LDDP++V+++L KLV D
Sbjct: 183 LCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLV--KED 240
Query: 103 DDLMAAQIGFDLYESATQAFLASVLQELKTCAPIPDATHVVVKVPVEGAPTPATPDTEAP 162
+ LMA QI FDLYESA+Q FL+SV+Q L+T G P + P +
Sbjct: 241 NLLMAYQICFDLYESASQQFLSSVIQNLRTV----------------GTPIASVPGSTNT 284
Query: 163 TPAPGTE--SGPSSTTPGPETKTLESLNEKEKQLQARITKLSKILSGEVSIDLHLQFLIR 220
PG+E S P T + + + + + K+ KILSGE++I+LHLQFLIR
Sbjct: 285 GTVPGSEKDSDPMETEEKTASAVAGKTPDASPEPKDQTLKMIKILSGEMAIELHLQFLIR 344
Query: 221 SNKTDMLILKNTKESIRVSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTA 280
+N TD++ILKNTK+++R S+CHTAT+IAN+FMH GTTSDQFLRDNLEWLARATNWAK TA
Sbjct: 345 NNNTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTA 404
Query: 281 TASLGVIHRGHETEALAHMQSYLPRETGPTSGYYEGGGLYALGLIHANHGAVINDYLLGQ 340
TASLGVIH+GHE EAL M +YLP++T P S Y EGGGLYALGLIHANHG I DYLL Q
Sbjct: 405 TASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQ 464
Query: 341 VKDATN--------------------------------EDDAVTGEAAGIAMGLVLLGSK 368
+K+A+N +DDAVTGEAAG+A+GLV+LGSK
Sbjct: 465 LKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSK 524
Query: 369 SESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQLENADDLVRDLCEEKDAILRRSGMY 428
+ AI+DMV YA+ETQHEKILRGLAVGI+ +MYG++E AD L+ LC +KD ILRRSGM
Sbjct: 525 NAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGM- 583
Query: 429 TIAMAYCVSYLYFDLFSDLTYRIVKNRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDD 488
YT+AMAYCGSG+N A +RLLHVAVSDVNDD
Sbjct: 584 ------------------------------YTVAMAYCGSGNNKAIRRLLHVAVSDVNDD 613
Query: 489 VRREAVTALGFILFRTLFYVAPACTRSPWPGVISLLDD 526
VRR AV +LGFILFRT C P V+SLL +
Sbjct: 614 VRRAAVESLGFILFRT----PEQC-----PSVVSLLSE 642
Score = 480 bits (1236), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/335 (68%), Positives = 270/335 (80%), Gaps = 30/335 (8%)
Query: 562 KLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSICHTATIIANAFMHSGTTSD 621
K+ KILSGE++I+LHLQFLIR+N TD++ILKNTK+++R S+CHTAT+IAN+FMH GTTSD
Sbjct: 324 KMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSD 383
Query: 622 QFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRETGPTSGYYEGGGL 681
QFLRDNLEWLARATNWAK TATASLGVIH+GHE EAL M +YLP++T P S Y EGGGL
Sbjct: 384 QFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGL 443
Query: 682 YALGLIHANHGAVINDYLLGQVKDATNEMVRHGGCLGLGLAAMGSARDDIYEQLKFNLYQ 741
YALGLIHANHG I DYLL Q+K+A+N++VRHGG LGLGLAAMG+AR D+Y+ LK NLYQ
Sbjct: 444 YALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQ 503
Query: 742 DDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQLENA 801
DDAVTGEAAG+A+GLV+LGSK+ AI+DMV YA+ETQHEKILRGLAVGI+ +MYG++E A
Sbjct: 504 DDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEA 563
Query: 802 DDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAILRRSGMYTIAMAYCGS 861
D L+ LC +KD ILR RSGMYT+AMAYCGS
Sbjct: 564 DALIESLCRDKDPILR------------------------------RSGMYTVAMAYCGS 593
Query: 862 GSNVATKRLLHVAVSDVNDDVRREAVTALGFILFR 896
G+N A +RLLHVAVSDVNDDVRR AV +LGFILFR
Sbjct: 594 GNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFR 628
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 519 GVISLLDDPMIELKEFSLKKLNDIVDDFWPE 549
G+ISLLD+ +LKEF+L KLN +V+DFW E
Sbjct: 7 GIISLLDEEEPQLKEFALHKLNAVVNDFWAE 37
>sp|O88761|PSMD1_RAT 26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus
GN=Psmd1 PE=2 SV=1
Length = 953
Score = 505 bits (1301), Expect = e-142, Method: Compositional matrix adjust.
Identities = 274/530 (51%), Positives = 342/530 (64%), Gaps = 116/530 (21%)
Query: 43 LAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSAD 102
L MS +Q++ FR ++LR LV++Y +L PD++N+ QC I+LDD ++V+++L KLV D
Sbjct: 183 LCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDTQAVSDILEKLV--KED 240
Query: 103 DDLMAAQIGFDLYESATQAFLASVLQELKTCAPIPDATHVVVKVPVEGAPTPATPDTEAP 162
+ LMA QI FDLYESA+Q FL+SV+Q L+T G P + P +
Sbjct: 241 NLLMAYQICFDLYESASQQFLSSVIQNLRTV----------------GTPIASVPGS--- 281
Query: 163 TPAPGTESGPSSTTPGPETKTLESLNEKEKQLQA--------------RITKLSKILSGE 208
T +G T PGPE K +S+ +EK A + K+ KILSGE
Sbjct: 282 -----TNTG---TVPGPE-KDSDSMETEEKTAGAVAGKTPDASPEPKDQTLKMIKILSGE 332
Query: 209 VSIDLHLQFLIRSNKTDMLILKNTKESIRVSICHTATIIANAFMHSGTTSDQFLRDNLEW 268
++I+LHLQFLIR+N TD++ILKNTK+++R S+CHTAT+IAN+FMH GTTSDQFLRDNLEW
Sbjct: 333 MAIELHLQFLIRNNNTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLEW 392
Query: 269 LARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRETGPTSGYYEGGGLYALGLIHAN 328
LARATNWAK TATASLGVIH+GHE EAL M +YLP++T P S Y EGGGLYALGLIHAN
Sbjct: 393 LARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHAN 452
Query: 329 HGAVINDYLLGQVKDATN--------------------------------EDDAVTGEAA 356
HG I DYLL Q+K+A+N +DDAVTGEAA
Sbjct: 453 HGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAA 512
Query: 357 GIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQLENADDLVRDLCE 416
G+A+GLV+LGSK+ AI+DMV YA+ETQHEKILRGLAVGI+ +MYG++E AD L+ LC
Sbjct: 513 GLALGLVMLGSKNTQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCR 572
Query: 417 EKDAILRRSGMYTIAMAYCVSYLYFDLFSDLTYRIVKNRSGMYTIAMAYCGSGSNVATKR 476
+KD ILRRSGM YT+AMAYCGSG+N A +R
Sbjct: 573 DKDPILRRSGM-------------------------------YTVAMAYCGSGNNKAIRR 601
Query: 477 LLHVAVSDVNDDVRREAVTALGFILFRTLFYVAPACTRSPWPGVISLLDD 526
LLHVAVSDVNDDVRR AV +LGFILFRT C P V+SLL +
Sbjct: 602 LLHVAVSDVNDDVRRAAVESLGFILFRT----PEQC-----PSVVSLLSE 642
Score = 480 bits (1236), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/335 (68%), Positives = 270/335 (80%), Gaps = 30/335 (8%)
Query: 562 KLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSICHTATIIANAFMHSGTTSD 621
K+ KILSGE++I+LHLQFLIR+N TD++ILKNTK+++R S+CHTAT+IAN+FMH GTTSD
Sbjct: 324 KMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSD 383
Query: 622 QFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRETGPTSGYYEGGGL 681
QFLRDNLEWLARATNWAK TATASLGVIH+GHE EAL M +YLP++T P S Y EGGGL
Sbjct: 384 QFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGL 443
Query: 682 YALGLIHANHGAVINDYLLGQVKDATNEMVRHGGCLGLGLAAMGSARDDIYEQLKFNLYQ 741
YALGLIHANHG I DYLL Q+K+A+N++VRHGG LGLGLAAMG+AR D+Y+ LK NLYQ
Sbjct: 444 YALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQ 503
Query: 742 DDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQLENA 801
DDAVTGEAAG+A+GLV+LGSK+ AI+DMV YA+ETQHEKILRGLAVGI+ +MYG++E A
Sbjct: 504 DDAVTGEAAGLALGLVMLGSKNTQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEA 563
Query: 802 DDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAILRRSGMYTIAMAYCGS 861
D L+ LC +KD ILR RSGMYT+AMAYCGS
Sbjct: 564 DALIESLCRDKDPILR------------------------------RSGMYTVAMAYCGS 593
Query: 862 GSNVATKRLLHVAVSDVNDDVRREAVTALGFILFR 896
G+N A +RLLHVAVSDVNDDVRR AV +LGFILFR
Sbjct: 594 GNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFR 628
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 519 GVISLLDDPMIELKEFSLKKLNDIVDDFWPE 549
G+ISLLD+ +LKEF+L KLN +V+DFW E
Sbjct: 7 GIISLLDEEEPQLKEFALHKLNAVVNDFWAE 37
>sp|Q54JM5|PSMD1_DICDI 26S proteasome non-ATPase regulatory subunit 1 OS=Dictyostelium
discoideum GN=psmD1 PE=1 SV=1
Length = 975
Score = 326 bits (836), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 195/508 (38%), Positives = 279/508 (54%), Gaps = 94/508 (18%)
Query: 30 RVHSALKSCVPWCLAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSV 89
V+S L C+ C S+ +R FR +L LV L+ + PDY+++ QC I+LD+ V
Sbjct: 170 NVNSMLSYCLHICNV--SVNNRHFRHSVLGILVNLHLAQEKPDYLSVVQCLIFLDNHIEV 227
Query: 90 ANLLGKLVAGSADDDLMAAQIGFDLYESATQAFLASVLQELKTCAPIPDATHVVVKVPVE 149
A +L L+ + L+A QIGFDL++++TQ FL +V L V K
Sbjct: 228 ATILLSLIKKDEESLLLAYQIGFDLFQNSTQQFLLNVRNRLPP---------VEKKSTTT 278
Query: 150 GAPTPATPDTEAPTPAPGTESGPSSTTPGPETKTLESLNEKEKQLQARITKLSKILSGEV 209
TPA+ E + +SG SS+ + R+ +L IL G+V
Sbjct: 279 TTTTPASDSMEIDIDSGNEKSGGSSS------------------FEQRLERLHSILIGDV 320
Query: 210 SIDLHLQFLIRSNKTDMLIL---KNTKESIRVSICHTATIIANAFMHSGTTSDQFLRDNL 266
SI ++L+FL R+ TDM IL K T E + +I ++ T+ ANA MH+GTT D FLR N+
Sbjct: 321 SIGMNLEFLYRNCSTDMHILQSMKTTSELHKGAIFYSGTLFANALMHAGTTRDTFLRSNI 380
Query: 267 EWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRETGPTSGYYEGGGLYALGLIH 326
EWL ++T+W K +A +SLGVI++GH E+ + +++YLP + + Y E G LYALGLIH
Sbjct: 381 EWLYKSTHWTKFSAISSLGVINKGHIKESKSLLKTYLPGASVNQTPYSESGSLYALGLIH 440
Query: 327 ANHGAVINDYLLGQV-------------------------------KDATNEDDAVTGEA 355
A+HG I DYL+ ++ K DDAV+GEA
Sbjct: 441 ASHGEEIIDYLVEKLHINNAILHHGASLGLGLAAMATGRDDLYEDLKSVLYNDDAVSGEA 500
Query: 356 AGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQLENADDLVRDLC 415
AG+AMGLV+LGS ++ AI++M+AYA ETQHEK +R L++G++F+MYG+ E+AD L+ +
Sbjct: 501 AGLAMGLVMLGSGAKKAIEEMLAYAHETQHEKTIRSLSMGLAFLMYGKEESADTLIEQMI 560
Query: 416 EEKDAILRRSGMYTIAMAYCVSYLYFDLFSDLTYRIVKNRSGMYTIAMAYCGSGSNVATK 475
+KD ++R GMY IA AYCG+G N A +
Sbjct: 561 GDKDPLIRYGGMYAIA-------------------------------FAYCGTGHNDALR 589
Query: 476 RLLHVAVSDVNDDVRREAVTALGFILFR 503
+LLHVAVSD D VRR AVT +GF+L R
Sbjct: 590 KLLHVAVSDGTDSVRRAAVTCIGFVLSR 617
Score = 324 bits (830), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 169/354 (47%), Positives = 234/354 (66%), Gaps = 37/354 (10%)
Query: 550 NEKE---KQLQARITKLSKILSGEVSIDLHLQFLIRSNKTDMLIL---KNTKESIRVSIC 603
NEK + R+ +L IL G+VSI ++L+FL R+ TDM IL K T E + +I
Sbjct: 296 NEKSGGSSSFEQRLERLHSILIGDVSIGMNLEFLYRNCSTDMHILQSMKTTSELHKGAIF 355
Query: 604 HTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQS 663
++ T+ ANA MH+GTT D FLR N+EWL ++T+W K +A +SLGVI++GH E+ + +++
Sbjct: 356 YSGTLFANALMHAGTTRDTFLRSNIEWLYKSTHWTKFSAISSLGVINKGHIKESKSLLKT 415
Query: 664 YLPRETGPTSGYYEGGGLYALGLIHANHGAVINDYLLGQVKDATNEMVRHGGCLGLGLAA 723
YLP + + Y E G LYALGLIHA+HG I DYL+ ++ N ++ HG LGLGLAA
Sbjct: 416 YLPGASVNQTPYSESGSLYALGLIHASHGEEIIDYLVEKLH-INNAILHHGASLGLGLAA 474
Query: 724 MGSARDDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKIL 783
M + RDD+YE LK LY DDAV+GEAAG+AMGLV+LGS ++ AI++M+AYA ETQHEK +
Sbjct: 475 MATGRDDLYEDLKSVLYNDDAVSGEAAGLAMGLVMLGSGAKKAIEEMLAYAHETQHEKTI 534
Query: 784 RGLAVGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHD 843
R L++G++F+MYG+ E+AD L+ + +KD ++R GMY IA AYCG+G N D
Sbjct: 535 RSLSMGLAFLMYGKEESADTLIEQMIGDKDPLIRYGGMYAIAFAYCGTGHN--------D 586
Query: 844 AILRRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFRK 897
A+ ++LLHVAVSD D VRR AVT +GF+L R+
Sbjct: 587 AL----------------------RKLLHVAVSDGTDSVRRAAVTCIGFVLSRQ 618
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 521 ISLLDDPMIELKEFSLKKLNDIVDDFWPE 549
+SLLD+ +ELK +SL+KL+ VD+FW E
Sbjct: 11 LSLLDEDQLELKSYSLEKLDSCVDEFWSE 39
Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 703 VKDATNEMVRHGGCLGLGLAAMGSARDDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSK 762
+ ++ N VR+G LG+A G+ + D E LK +AA I+M +VL+ +
Sbjct: 629 LAESYNPHVRYGAAFALGIACAGTGQRDALEILKSLTTDSVGYVKQAAWISMAMVLIQTS 688
Query: 763 SE 764
E
Sbjct: 689 KE 690
>sp|O74762|RPN2_SCHPO 26S proteasome regulatory subunit rpn2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rpn2 PE=1 SV=1
Length = 965
Score = 307 bits (786), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 158/335 (47%), Positives = 222/335 (66%), Gaps = 33/335 (9%)
Query: 565 KILSGEVSIDLHLQFLIRSNKTDMLILKNTKESI--RVSICHTATIIANAFMHSGTTSDQ 622
+ILSGE ++ +FL N TDMLIL TK+S+ R S+ H A ANAFM+ GT+SD
Sbjct: 307 RILSGEQTVKYDREFLYAHNNTDMLILNRTKDSLEARNSVFHNAVTFANAFMNFGTSSDS 366
Query: 623 FLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRETGPTSGYY-EGGGL 681
F RDNL WL++A NW+K TATA+LGVIHRG+ +A+ ++ YLP E P+S Y EGG
Sbjct: 367 FFRDNLSWLSKANNWSKFTATAALGVIHRGYYNQAMNILRPYLPEEDAPSSSTYSEGGAF 426
Query: 682 YALGLIHANHGAVINDYLLGQVKDATNEMVRHGGCLGLGLAAMGSARDDIYEQLKFNLYQ 741
YA+GLIHANHG + +YL Q+K +E+V++G LG+GL M S + +YE +K L+
Sbjct: 427 YAMGLIHANHGRGVTEYLREQLKHTEDEIVQYGLLLGIGLTGMASRDETLYESVKTILFN 486
Query: 742 DDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQLENA 801
D+AV G AAGI+MGL++LG+ S +AI +M+ YA ETQHEKI+RGL +GI+ I+YG+ + A
Sbjct: 487 DNAVAGSAAGISMGLIMLGTASSAAIDEMLQYAHETQHEKIIRGLGIGIALIVYGRQQEA 546
Query: 802 DDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAILRRSGMYTIAMAYCGS 861
D ++++L + D LR +GM+ A+AYCG+ ++ +++ D
Sbjct: 547 DGIIKELNNDLDPTLRYAGMFATALAYCGTSNS----KIVRD------------------ 584
Query: 862 GSNVATKRLLHVAVSDVNDDVRREAVTALGFILFR 896
+LH++VSDVNDDVRR AV ALGFI F+
Sbjct: 585 --------VLHISVSDVNDDVRRAAVCALGFICFK 611
Score = 306 bits (785), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 176/469 (37%), Positives = 251/469 (53%), Gaps = 111/469 (23%)
Query: 71 PDYVNMAQCWIYLDDPRSVANLLGKLVAGSADDDLMAA-QIGFDLYESATQAFLASVLQE 129
PDY ++ +C ++L+D A LL KL + + D L+ A Q+ FDL +SA Q FL SV+
Sbjct: 218 PDYFSVGKCVVHLNDASVAAKLLMKLSSQNDDKSLLTAYQLAFDLEDSAPQEFLNSVMDL 277
Query: 130 LKTCAPIPDATHVVVKVPVEGAPTPATPDTEAPTPAPGTESGPSSTTPGPETKTLESLNE 189
L P+P+ ++E A +
Sbjct: 278 L---------------------PSPSVANSEEDANA-----------------------D 293
Query: 190 KEKQLQARITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESI--RVSICHTATII 247
+K+ + + +ILSGE ++ +FL N TDMLIL TK+S+ R S+ H A
Sbjct: 294 SKKEDSSPCGYIIRILSGEQTVKYDREFLYAHNNTDMLILNRTKDSLEARNSVFHNAVTF 353
Query: 248 ANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRET 307
ANAFM+ GT+SD F RDNL WL++A NW+K TATA+LGVIHRG+ +A+ ++ YLP E
Sbjct: 354 ANAFMNFGTSSDSFFRDNLSWLSKANNWSKFTATAALGVIHRGYYNQAMNILRPYLPEED 413
Query: 308 GPTSGYY-EGGGLYALGLIHANHGAVINDYLLGQVKDATNE------------------- 347
P+S Y EGG YA+GLIHANHG + +YL Q+K +E
Sbjct: 414 APSSSTYSEGGAFYAMGLIHANHGRGVTEYLREQLKHTEDEIVQYGLLLGIGLTGMASRD 473
Query: 348 -------------DDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAV 394
D+AV G AAGI+MGL++LG+ S +AI +M+ YA ETQHEKI+RGL +
Sbjct: 474 ETLYESVKTILFNDNAVAGSAAGISMGLIMLGTASSAAIDEMLQYAHETQHEKIIRGLGI 533
Query: 395 GISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCVSYLYFDLFSDLTYRIVKN 454
GI+ I+YG+ + AD ++++L + D LR +GM+ A+
Sbjct: 534 GIALIVYGRQQEADGIIKELNNDLDPTLRYAGMFATAL---------------------- 571
Query: 455 RSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFR 503
AYCG+ ++ + +LH++VSDVNDDVRR AV ALGFI F+
Sbjct: 572 ---------AYCGTSNSKIVRDVLHISVSDVNDDVRRAAVCALGFICFK 611
>sp|P32565|RPN2_YEAST 26S proteasome regulatory subunit RPN2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPN2 PE=1 SV=4
Length = 945
Score = 285 bits (729), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 177/449 (39%), Positives = 243/449 (54%), Gaps = 61/449 (13%)
Query: 477 LLHVAVSDVNDDVRREAVTALGFILFRTLFYVAPACTRSPWPGVISLLDDPMIELKEFS- 535
LL +A++ V + R ++ F + P C V+ L+D + L+ F
Sbjct: 189 LLTLAITTVTNSKFRSSILRKSFDFLMNM----PNCDYLTLNKVVVNLNDAGLALQLFKK 244
Query: 536 LKKLND------IVDDFWPENEKEKQLQARITKLS---------KILSGEVSIDLHLQFL 580
LK+ ND I D + ++ L+ +T+L+ ILSG + D + FL
Sbjct: 245 LKEENDEGLSAQIAFDLV-SSASQQLLEILVTELTAQGYDPALLNILSGLPTCDYYNTFL 303
Query: 581 IRSNKTDMLILKNTKESI--RVSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNWA 638
+ + D+ +L +K S+ + S+ HTA +AN FMH+GTT + F++ NL WL +A NWA
Sbjct: 304 LNNKNIDIGLLNKSKSSLDGKFSLFHTAVSVANGFMHAGTTDNSFIKANLPWLGKAQNWA 363
Query: 639 KLTATASLGVIHRGHETEALAHMQSYLPRETGPTSGYYEGGGLYALGLIHANHGAVINDY 698
K TATASLGVIH+G+ E M YLP +S + +GG LY LGLI+A G DY
Sbjct: 364 KFTATASLGVIHKGNLLEGKKVMAPYLPGSRA-SSRFIKGGSLYGLGLIYAGFGRDTTDY 422
Query: 699 L-------LGQVKDATNEMVRHGGCLGLGLAAMGSARDDIYEQLKFNLYQDDAVTGEAAG 751
L G D +++ HG LG+GLAAMGSA ++YE LK LY D A +GEAA
Sbjct: 423 LKNIIVENSGTSGDEDVDVLLHGASLGIGLAAMGSANIEVYEALKEVLYNDSATSGEAAA 482
Query: 752 IAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQLENADDLVRDLCEE 811
+ MGL +LG+ AI DM Y++ETQH I RGLAVG++ I YG+ E ADDL+ +
Sbjct: 483 LGMGLCMLGTGKPEAIHDMFTYSQETQHGNITRGLAVGLALINYGRQELADDLITKMLAS 542
Query: 812 KDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAILRRSGMYTIAMAYCGSGSNVATKRLL 871
+++LR G +TIA+AY G+G+N A KR LL
Sbjct: 543 DESLLRYGGAFTIALAYAGTGNNSAVKR------------------------------LL 572
Query: 872 HVAVSDVNDDVRREAVTALGFILFRKKRT 900
HVAVSD NDDVRR AV ALGF+L R T
Sbjct: 573 HVAVSDSNDDVRRAAVIALGFVLLRDYTT 601
Score = 233 bits (595), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 138/344 (40%), Positives = 181/344 (52%), Gaps = 73/344 (21%)
Query: 201 LSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESI--RVSICHTATIIANAFMHSGTTS 258
L ILSG + D + FL+ + D+ +L +K S+ + S+ HTA +AN FMH+GTT
Sbjct: 286 LLNILSGLPTCDYYNTFLLNNKNIDIGLLNKSKSSLDGKFSLFHTAVSVANGFMHAGTTD 345
Query: 259 DQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRETGPTSGYYEGGG 318
+ F++ NL WL +A NWAK TATASLGVIH+G+ E M YLP +S + +GG
Sbjct: 346 NSFIKANLPWLGKAQNWAKFTATASLGVIHKGNLLEGKKVMAPYLPGSRA-SSRFIKGGS 404
Query: 319 LYALGLIHANHGAVINDYL------------------------LG--------------- 339
LY LGLI+A G DYL LG
Sbjct: 405 LYGLGLIYAGFGRDTTDYLKNIIVENSGTSGDEDVDVLLHGASLGIGLAAMGSANIEVYE 464
Query: 340 QVKDATNEDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFI 399
+K+ D A +GEAA + MGL +LG+ AI DM Y++ETQH I RGLAVG++ I
Sbjct: 465 ALKEVLYNDSATSGEAAALGMGLCMLGTGKPEAIHDMFTYSQETQHGNITRGLAVGLALI 524
Query: 400 MYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCVSYLYFDLFSDLTYRIVKNRSGMY 459
YG+ E ADDL+ + +++LR G +T
Sbjct: 525 NYGRQELADDLITKMLASDESLLRYGGAFT------------------------------ 554
Query: 460 TIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFR 503
IA+AY G+G+N A KRLLHVAVSD NDDVRR AV ALGF+L R
Sbjct: 555 -IALAYAGTGNNSAVKRLLHVAVSDSNDDVRRAAVIALGFVLLR 597
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 43 LAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSAD 102
LA++++ + FR+ ILR ++ DY+ + + + L+D L KL +
Sbjct: 192 LAITTVTNSKFRSSILRKSFDFLMNMPNCDYLTLNKVVVNLNDAGLALQLFKKL--KEEN 249
Query: 103 DDLMAAQIGFDLYESATQAFLASVLQELKTCAPIPDATHVVVKVP 147
D+ ++AQI FDL SA+Q L ++ EL P +++ +P
Sbjct: 250 DEGLSAQIAFDLVSSASQQLLEILVTELTAQGYDPALLNILSGLP 294
>sp|Q6FIP2|RPN2_CANGA 26S proteasome regulatory subunit RPN2 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=RPN2 PE=3 SV=1
Length = 941
Score = 266 bits (680), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 206/347 (59%), Gaps = 40/347 (11%)
Query: 563 LSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESI--RVSICHTATIIANAFMHSGTTS 620
L +IL+G + D + FL+ D+ +L +K S+ + S+ HTA ++N +MH+GTT
Sbjct: 283 LLEILTGIPTCDYYNTFLLNKKNIDISLLNKSKSSLDGKFSLFHTAVSVSNGYMHAGTTD 342
Query: 621 DQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRETGPTSGYYEGGG 680
+ F++ NL WL +A NWAK +ATASLGVIH+G+ + M YLP + +S + +GG
Sbjct: 343 NSFIKANLSWLGKAQNWAKFSATASLGVIHKGNLIDGKKVMAPYLPG-SRSSSRFIKGGS 401
Query: 681 LYALGLIHANHGAVINDYL-------LGQVKDATNEMVRHGGCLGLGLAAMGSARDDIYE 733
LY LGLI+A G I DYL G D +++ HG LG+GLAAMG+A +++YE
Sbjct: 402 LYGLGLIYAGFGRDIVDYLKTHLIENSGTTGDEDVDVLLHGASLGVGLAAMGTANNEVYE 461
Query: 734 QLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFI 793
LK LY D A +GEAA +GL LLG+ E+AI D+ YA+ET H I RGL++ ++ I
Sbjct: 462 ALKDVLYNDVATSGEAAAFGIGLTLLGTGDETAINDLFTYAQETSHGNITRGLSMALALI 521
Query: 794 MYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAILRRSGMYT 853
YG+ E AD+L+ + +++++R G ++IA+AY G+G+N K
Sbjct: 522 NYGRQEQADELIDKMLASENSLIRYGGAFSIALAYVGTGNNKVVK--------------- 566
Query: 854 IAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFRKKRT 900
+LLH+AVSD NDDVRR AVTALGF+L R T
Sbjct: 567 ---------------KLLHLAVSDSNDDVRRAAVTALGFVLLRDYTT 598
Score = 219 bits (557), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 183/344 (53%), Gaps = 73/344 (21%)
Query: 201 LSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESI--RVSICHTATIIANAFMHSGTTS 258
L +IL+G + D + FL+ D+ +L +K S+ + S+ HTA ++N +MH+GTT
Sbjct: 283 LLEILTGIPTCDYYNTFLLNKKNIDISLLNKSKSSLDGKFSLFHTAVSVSNGYMHAGTTD 342
Query: 259 DQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRETGPTSGYYEGGG 318
+ F++ NL WL +A NWAK +ATASLGVIH+G+ + M YLP + +S + +GG
Sbjct: 343 NSFIKANLSWLGKAQNWAKFSATASLGVIHKGNLIDGKKVMAPYLPG-SRSSSRFIKGGS 401
Query: 319 LYALGLIHANHGAVINDYL------------------------LG--------------- 339
LY LGLI+A G I DYL LG
Sbjct: 402 LYGLGLIYAGFGRDIVDYLKTHLIENSGTTGDEDVDVLLHGASLGVGLAAMGTANNEVYE 461
Query: 340 QVKDATNEDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFI 399
+KD D A +GEAA +GL LLG+ E+AI D+ YA+ET H I RGL++ ++ I
Sbjct: 462 ALKDVLYNDVATSGEAAAFGIGLTLLGTGDETAINDLFTYAQETSHGNITRGLSMALALI 521
Query: 400 MYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCVSYLYFDLFSDLTYRIVKNRSGMY 459
YG+ E AD+L+ + +++++R G ++
Sbjct: 522 NYGRQEQADELIDKMLASENSLIRYGGAFS------------------------------ 551
Query: 460 TIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFR 503
IA+AY G+G+N K+LLH+AVSD NDDVRR AVTALGF+L R
Sbjct: 552 -IALAYVGTGNNKVVKKLLHLAVSDSNDDVRRAAVTALGFVLLR 594
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 44 AMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSADD 103
A +++ + F+ +ILR L L L DY ++ + L+DP L KL +
Sbjct: 190 ATTTVFNSKFKDEILRLLFDLLMPLKNADYFITSKVVVNLNDPELATQLFEKL--HDEEQ 247
Query: 104 DLMAAQIGFDLYESATQAFL 123
++ QI FDL SA+Q L
Sbjct: 248 IEVSYQIAFDLVSSASQHLL 267
>sp|Q75CF3|RPN2_ASHGO 26S proteasome regulatory subunit RPN2 OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=RPN2 PE=3 SV=1
Length = 930
Score = 259 bits (663), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 145/348 (41%), Positives = 209/348 (60%), Gaps = 40/348 (11%)
Query: 562 KLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESI--RVSICHTATIIANAFMHSGTT 619
+L +ILSG + D + FL + + D +L +K S+ + S+ HTA ++NAFMH+GTT
Sbjct: 277 RLVEILSGLPTCDFYNTFLHANKRIDRSLLNKSKSSMDGKFSLFHTAVSVSNAFMHAGTT 336
Query: 620 SDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRETGPTSGYYEGG 679
D F+R NL+WL +A NWAK TATASLG+IH+G+ T M+ YLP +S Y +GG
Sbjct: 337 DDTFVRANLQWLGKAQNWAKFTATASLGIIHQGNLTGGKKIMEPYLPGSRA-SSRYIKGG 395
Query: 680 GLYALGLIHANHGAVINDYLLGQ-VKDATN------EMVRHGGCLGLGLAAMGSARDDIY 732
LY LGLI+A +G I YL Q V++++N +++ HG LG+GLA M S +I+
Sbjct: 396 SLYGLGLIYAGYGKEIIGYLKDQIVENSSNATDDDVDVLLHGASLGIGLAGMSSNSTEIF 455
Query: 733 EQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISF 792
E LK LY D A +G AA + +GL +LGS E+ +++ YA+ET H +I +GLA+ ++
Sbjct: 456 EALKEVLYADSANSGAAAALGIGLTMLGSGDETVAENLYTYAQETSHGEITKGLAIALAL 515
Query: 793 IMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAILRRSGMY 852
+ YG+ E AD+ ++ + E ++ +R +YTIA+AY G+ SN A K
Sbjct: 516 LNYGREELADETIKKMLEHENDSMRYGAVYTIALAYAGTSSNEAVK-------------- 561
Query: 853 TIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFRKKRT 900
+LLHVAVSD NDDVRR +VTALGF+L R T
Sbjct: 562 ----------------KLLHVAVSDSNDDVRRASVTALGFVLIRDYTT 593
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 187/345 (54%), Gaps = 73/345 (21%)
Query: 200 KLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESI--RVSICHTATIIANAFMHSGTT 257
+L +ILSG + D + FL + + D +L +K S+ + S+ HTA ++NAFMH+GTT
Sbjct: 277 RLVEILSGLPTCDFYNTFLHANKRIDRSLLNKSKSSMDGKFSLFHTAVSVSNAFMHAGTT 336
Query: 258 SDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRETGPTSGYYEGG 317
D F+R NL+WL +A NWAK TATASLG+IH+G+ T M+ YLP +S Y +GG
Sbjct: 337 DDTFVRANLQWLGKAQNWAKFTATASLGIIHQGNLTGGKKIMEPYLPGSRA-SSRYIKGG 395
Query: 318 GLYALGLIHANHGAVINDYLLGQV----KDATNE-------------------------- 347
LY LGLI+A +G I YL Q+ +AT++
Sbjct: 396 SLYGLGLIYAGYGKEIIGYLKDQIVENSSNATDDDVDVLLHGASLGIGLAGMSSNSTEIF 455
Query: 348 ---------DDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISF 398
D A +G AA + +GL +LGS E+ +++ YA+ET H +I +GLA+ ++
Sbjct: 456 EALKEVLYADSANSGAAAALGIGLTMLGSGDETVAENLYTYAQETSHGEITKGLAIALAL 515
Query: 399 IMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCVSYLYFDLFSDLTYRIVKNRSGM 458
+ YG+ E AD+ ++ + E ++ +R +YT
Sbjct: 516 LNYGREELADETIKKMLEHENDSMRYGAVYT----------------------------- 546
Query: 459 YTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFR 503
IA+AY G+ SN A K+LLHVAVSD NDDVRR +VTALGF+L R
Sbjct: 547 --IALAYAGTSSNEAVKKLLHVAVSDSNDDVRRASVTALGFVLIR 589
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 44 AMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSADD 103
A +++ + F+ IL L + L PDY +++ + L+D + A L KLV S +
Sbjct: 185 ATTTVSNTHFKINILYALFDILIRLKAPDYFAVSKIIVNLNDSKLAARLFDKLV--SEKN 242
Query: 104 DLMAAQIGFDLYESATQAFLASVLQELKT 132
+A QI FDL SA+Q L ++ L T
Sbjct: 243 TEIAYQIAFDLVTSASQGLLNELVATLST 271
>sp|Q18115|PSMD1_CAEEL 26S proteasome non-ATPase regulatory subunit 1 OS=Caenorhabditis
elegans GN=rpn-2 PE=3 SV=4
Length = 965
Score = 248 bits (632), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/342 (38%), Positives = 198/342 (57%), Gaps = 30/342 (8%)
Query: 560 ITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSICHTATIIANAFMHSGTT 619
+ K+ IL G ++ +L F +R N TD ++++ KE+IR + H A +I+N M GTT
Sbjct: 299 MEKIHSILKGHETVKAYLDFFVRHNHTDSVLMEEIKENIRTASAHNALLISNGLMQYGTT 358
Query: 620 SDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRETGPTSGYYEGG 679
D FLR+NL W+++ATNW K A ASLG+IH G E+ A+ ++ YLP+E+ G+ EGG
Sbjct: 359 CDDFLRNNLNWVSKATNWNKFNAVASLGLIHHGQESSAMKVLEPYLPKESVEGFGFKEGG 418
Query: 680 GLYALGLIHANHGAVINDYLLGQ-VKDATNEMVRHGGCLGLGLAAMGSARDDIYEQLKFN 738
+ A GLIHA HG L Q +K A NE VRHG CLG G+A +GS+ YE+++
Sbjct: 419 AMLAYGLIHAKHGDATAMSTLAQWLKTAENEPVRHGACLGFGVAGLGSSSVSNYEKVREV 478
Query: 739 LYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQL 798
L +D+AV+GE+AGIAMGL++ G ++ ++ Y +TQH+K RG+ G++ +G
Sbjct: 479 LQRDEAVSGESAGIAMGLIMAGHLNQEVFNELKQYTVDTQHDKTQRGIRTGLACAAFGLQ 538
Query: 799 ENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAILRRSGMYTIAMAY 858
+A+ + K+AI G+ SN +LR +G+ ++MAY
Sbjct: 539 GDAEPYI------KEAI--------------GAKSN---------PMLRSTGICMLSMAY 569
Query: 859 CGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFRKKRT 900
G+GS +RLL +D N DV+R A +GF+L + T
Sbjct: 570 AGTGSPDVVRRLLEKVATDPNLDVKRYATIGIGFVLSKDPST 611
Score = 200 bits (509), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 183/365 (50%), Gaps = 67/365 (18%)
Query: 182 KTLESLNEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSIC 241
+ L+ +++ + + + K+ IL G ++ +L F +R N TD ++++ KE+IR +
Sbjct: 283 RVLKRFQQQDARDEKSMEKIHSILKGHETVKAYLDFFVRHNHTDSVLMEEIKENIRTASA 342
Query: 242 HTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQS 301
H A +I+N M GTT D FLR+NL W+++ATNW K A ASLG+IH G E+ A+ ++
Sbjct: 343 HNALLISNGLMQYGTTCDDFLRNNLNWVSKATNWNKFNAVASLGLIHHGQESSAMKVLEP 402
Query: 302 YLPRETGPTSGYYEGGGLYALGLIHANHGAVINDYLLGQ-VKDATNE------------- 347
YLP+E+ G+ EGG + A GLIHA HG L Q +K A NE
Sbjct: 403 YLPKESVEGFGFKEGGAMLAYGLIHAKHGDATAMSTLAQWLKTAENEPVRHGACLGFGVA 462
Query: 348 -------------------DDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKI 388
D+AV+GE+AGIAMGL++ G ++ ++ Y +TQH+K
Sbjct: 463 GLGSSSVSNYEKVREVLQRDEAVSGESAGIAMGLIMAGHLNQEVFNELKQYTVDTQHDKT 522
Query: 389 LRGLAVGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCVSYLYFDLFSDLT 448
RG+ G++ +G +A+ +++ K + RS
Sbjct: 523 QRGIRTGLACAAFGLQGDAEPYIKEAIGAKSNPMLRS----------------------- 559
Query: 449 YRIVKNRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFR----T 504
+G+ ++MAY G+GS +RLL +D N DV+R A +GF+L +
Sbjct: 560 -------TGICMLSMAYAGTGSPDVVRRLLEKVATDPNLDVKRYATIGIGFVLSKDPSTC 612
Query: 505 LFYVA 509
L YVA
Sbjct: 613 LSYVA 617
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 51 RSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSADDDLMAAQI 110
RSFR Q++ T+++ Y PD + +C++ D+ + A+ + L+A S A QI
Sbjct: 211 RSFRFQVIDTVIKTYLKCPSPDMSKICECYVLTDNAEAAADTITSLIAKSL--STRAYQI 268
Query: 111 GFDLYESATQAFLASVLQELK 131
FDLYE+A+Q FL VL+ +
Sbjct: 269 AFDLYETASQGFLDRVLKRFQ 289
>sp|Q8SSH5|RPN2_ENCCU 26S proteasome regulatory subunit RPN2 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=RPN2 PE=1 SV=1
Length = 786
Score = 129 bits (325), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 175/364 (48%), Gaps = 59/364 (16%)
Query: 546 FWPENEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSICHT 605
F+ E+ +++ ++ ILSGE + FL+ N T L ESI + H
Sbjct: 221 FYTEDNYSPEIEVADQRVMSILSGEFKKKILGAFLLEKNLTSFKFL----ESIARTRTHY 276
Query: 606 ATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYL 665
+ AN+ M+ GT++D R+N + +++ WAK + AS+G+IH + +++YL
Sbjct: 277 LGL-ANSLMNLGTSNDTLYRNNADIFGQSSEWAKFSEVASIGMIHL-FNSNPYEILKNYL 334
Query: 666 PRETGPTSGYYEGGGLYALGLIHA-NHGAVINDYLLG--QVKDATNEMVRHGGCLGLGLA 722
P E EGG L ALGLI A +YLL +D + +G CLGLGL
Sbjct: 335 PSEVSQK----EGGALMALGLIKAGTFSEEDTEYLLYFLDTEDTLTPELAYGVCLGLGLI 390
Query: 723 AMGSARDDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKI 782
MGSA +I +LK D + EA+ MG++ L S S ++D+ A ET+ E++
Sbjct: 391 NMGSANREILNKLKELSKVDRTLLVEASVYGMGMLGLNSWSVELLEDLRTIAGETEFERV 450
Query: 783 LRGLAVGISF---IMYGQ--------LENAD--DLVRDLCEEKDAILRRSGMYTIAMAYC 829
R AVGISF +M+ + N D + + +L +KD+I+R +G+ ++ A+
Sbjct: 451 KR--AVGISFSLVLMFSEEMFYDECNASNGDFKNYINELLYDKDSIMRANGVLSLGSAFV 508
Query: 830 GSGSNVATKRLLHDAILRRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTA 889
G+G R G+ + + Y ++D +DDV+R AV A
Sbjct: 509 GTG---------------RLGVISTLLPY----------------INDGDDDVKRAAVIA 537
Query: 890 LGFI 893
+G +
Sbjct: 538 IGLV 541
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 156/357 (43%), Gaps = 94/357 (26%)
Query: 193 QLQARITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSICHTATIIANAFM 252
+++ ++ ILSGE + FL+ N T L ESI + H + AN+ M
Sbjct: 230 EIEVADQRVMSILSGEFKKKILGAFLLEKNLTSFKFL----ESIARTRTHYLGL-ANSLM 284
Query: 253 HSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRETGPTSG 312
+ GT++D R+N + +++ WAK + AS+G+IH + +++YLP E
Sbjct: 285 NLGTSNDTLYRNNADIFGQSSEWAKFSEVASIGMIHL-FNSNPYEILKNYLPSEVSQK-- 341
Query: 313 YYEGGGLYALGLIHA------------------------------------NHGAVINDY 336
EGG L ALGLI A N G+ N
Sbjct: 342 --EGGALMALGLIKAGTFSEEDTEYLLYFLDTEDTLTPELAYGVCLGLGLINMGSA-NRE 398
Query: 337 LLGQVKDATNEDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGI 396
+L ++K+ + D + EA+ MG++ L S S ++D+ A ET+ E++ R AVGI
Sbjct: 399 ILNKLKELSKVDRTLLVEASVYGMGMLGLNSWSVELLEDLRTIAGETEFERVKR--AVGI 456
Query: 397 SF---IMYGQ--------LENAD--DLVRDLCEEKDAILRRSGMYTIAMAYCVSYLYFDL 443
SF +M+ + N D + + +L +KD+I+R +G+ ++ A+
Sbjct: 457 SFSLVLMFSEEMFYDECNASNGDFKNYINELLYDKDSIMRANGVLSLGSAF--------- 507
Query: 444 FSDLTYRIVKNRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFI 500
+ R G+ + + Y ++D +DDV+R AV A+G +
Sbjct: 508 -------VGTGRLGVISTLLPY----------------INDGDDDVKRAAVIAIGLV 541
>sp|P87048|RPN1_SCHPO 26S proteasome regulatory subunit rpn1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rpn1 PE=1 SV=2
Length = 891
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 125/254 (49%), Gaps = 27/254 (10%)
Query: 606 ATIIANAFMHSGTTSDQFLRDNLE---WLARATNWAKLTATASLGVIHRGHETEALAHMQ 662
A NA +++G ++D+ + + E W+ + ++ATAS+G++ + L+ +
Sbjct: 370 ANTFVNALVNAGYSNDRLILVDDEKTSWIYKNKESGLISATASIGLLQLWNVDMGLSLLD 429
Query: 663 SYLPRETGPTSGYYEGGGLYALGLIHA---NHG----AVINDYL-LGQVKDATNEMVRHG 714
YL T + G L +G+ + N A++++YL G VK +R
Sbjct: 430 KYLYSSEENT----KAGALLGIGVTNVAVRNEADPAMAILSEYLETGSVK------LRAS 479
Query: 715 GCLGLGLAAMGSARDDIYEQLKFNLYQDDAVTGEA--AGIAMGLVLLGS----KSESAIQ 768
LGLGLA G+ R+D+ + L + D + A +++GL+ +G+ + + +Q
Sbjct: 480 AILGLGLAYSGANREDLLDMLSPIVTDTDCPMQLSCLAALSLGLIFVGTCNGDVASTILQ 539
Query: 769 DMVAYAKETQHEKILRGLAVGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAY 828
++ + Q+++ R +A+G++ + G+ + AD V L + I R++ + +Y
Sbjct: 540 TLMEREESAQNDQWGRFMALGLALLFNGKQDLADATVETLKAIEGKIARQAEILVDICSY 599
Query: 829 CGSGSNVATKRLLH 842
G+G+ + ++LLH
Sbjct: 600 AGTGNVLHIQKLLH 613
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 55/299 (18%), Positives = 119/299 (39%), Gaps = 78/299 (26%)
Query: 244 ATIIANAFMHSGTTSDQFLRDNLE---WLARATNWAKLTATASLGVIHRGHETEALAHMQ 300
A NA +++G ++D+ + + E W+ + ++ATAS+G++ + L+ +
Sbjct: 370 ANTFVNALVNAGYSNDRLILVDDEKTSWIYKNKESGLISATASIGLLQLWNVDMGLSLLD 429
Query: 301 SYLPRETGPTSGYYEGGGLYALGLIHA---NHG----AVINDYL--------------LG 339
YL T + G L +G+ + N A++++YL LG
Sbjct: 430 KYLYSSEENT----KAGALLGIGVTNVAVRNEADPAMAILSEYLETGSVKLRASAILGLG 485
Query: 340 QVKDATNEDDAVTGEA---------------AGIAMGLVLLGS----KSESAIQDMVAYA 380
N +D + + A +++GL+ +G+ + + +Q ++
Sbjct: 486 LAYSGANREDLLDMLSPIVTDTDCPMQLSCLAALSLGLIFVGTCNGDVASTILQTLMERE 545
Query: 381 KETQHEKILRGLAVGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCVSYLY 440
+ Q+++ R +A+G++ + G+ + AD V L + I R++ I + C
Sbjct: 546 ESAQNDQWGRFMALGLALLFNGKQDLADATVETLKAIEGKIARQA---EILVDIC----- 597
Query: 441 FDLFSDLTYRIVKNRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGF 499
+Y G+G+ + ++LLH+ +DD + T F
Sbjct: 598 -----------------------SYAGTGNVLHIQKLLHICSEPPSDDAKESETTIQTF 633
>sp|P56701|PSMD2_BOVIN 26S proteasome non-ATPase regulatory subunit 2 OS=Bos taurus
GN=PSMD2 PE=1 SV=2
Length = 908
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 29/254 (11%)
Query: 606 ATIIANAFMHSGTTSDQFLRDN-LEWLARATNWAKLTATASLGVIHRGHETEALAHMQSY 664
A+ N F+++ D+ L D+ +WL + + L+A ASLG+I L + Y
Sbjct: 373 ASSFVNGFVNAAFGQDKLLTDDGNKWLYKNKDHGMLSAAASLGMILLWDVDGGLTQIDKY 432
Query: 665 LPRETGPTSGYYEGGGLYALGLIHANHG---------AVINDYLLGQVKDATNEMVRHGG 715
L + Y + G L A G++ N G A+++DY+L +N M R G
Sbjct: 433 LYS----SEDYIKSGALLACGIV--NSGVRNECDPALALLSDYVLHN----SNTM-RLGS 481
Query: 716 CLGLGLAAMGSARDDIYEQLKFNLYQDDAVTGEAAGI---AMGLVLLGS----KSESAIQ 768
GLGLA GS R+D+ L + D + E AG+ A G++ +GS + + +Q
Sbjct: 482 IFGLGLAYAGSNREDVL-TLLLPVMGDSKSSMEVAGVTALACGMIAVGSCNGDVTSTILQ 540
Query: 769 DMVAYAKETQHEKILRGLAVGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAY 828
++ ++ + R L +G+ G+ E + ++ L + + AY
Sbjct: 541 TIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAY 600
Query: 829 CGSGSNVATKRLLH 842
GSG+ + ++LLH
Sbjct: 601 AGSGNVLKVQQLLH 614
Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 110/258 (42%), Gaps = 36/258 (13%)
Query: 244 ATIIANAFMHSGTTSDQFLRDN-LEWLARATNWAKLTATASLGVIHRGHETEALAHMQSY 302
A+ N F+++ D+ L D+ +WL + + L+A ASLG+I L + Y
Sbjct: 373 ASSFVNGFVNAAFGQDKLLTDDGNKWLYKNKDHGMLSAAASLGMILLWDVDGGLTQIDKY 432
Query: 303 LPRETGPTSGYYEGGGLYALGLIHANHG---------AVINDYLLGQVKDATNEDDAVTG 353
L + Y + G L A G++ N G A+++DY+L N + G
Sbjct: 433 LYS----SEDYIKSGALLACGIV--NSGVRNECDPALALLSDYVL------HNSNTMRLG 480
Query: 354 EAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGL-AVGISFIMYGQLENAD---D 409
G +GL GS E + ++ +++ + G+ A+ I G N D
Sbjct: 481 SIFG--LGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSC-NGDVTST 537
Query: 410 LVRDLCEEKDAILRRSGMYTIAMAYCVSYL-----YFDLFSDLTYRIVKNRSGMYTI--A 462
+++ + E+ + L+ + + + +++L + + L RS T+
Sbjct: 538 ILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDV 597
Query: 463 MAYCGSGSNVATKRLLHV 480
AY GSG+ + ++LLH+
Sbjct: 598 CAYAGSGNVLKVQQLLHI 615
>sp|Q13200|PSMD2_HUMAN 26S proteasome non-ATPase regulatory subunit 2 OS=Homo sapiens
GN=PSMD2 PE=1 SV=3
Length = 908
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 29/254 (11%)
Query: 606 ATIIANAFMHSGTTSDQFLRDN-LEWLARATNWAKLTATASLGVIHRGHETEALAHMQSY 664
A+ N F+++ D+ L D+ +WL + + L+A ASLG+I L + Y
Sbjct: 373 ASSFVNGFVNAAFGQDKLLTDDGNKWLYKNKDHGMLSAAASLGMILLWDVDGGLTQIDKY 432
Query: 665 LPRETGPTSGYYEGGGLYALGLIHANHG---------AVINDYLLGQVKDATNEMVRHGG 715
L + Y + G L A G++ N G A+++DY+L +N M R G
Sbjct: 433 LYS----SEDYIKSGALLACGIV--NSGVRNECDPALALLSDYVLHN----SNTM-RLGS 481
Query: 716 CLGLGLAAMGSARDDIYEQLKFNLYQDDAVTGEAAGI---AMGLVLLGS----KSESAIQ 768
GLGLA GS R+D+ L + D + E AG+ A G++ +GS + + +Q
Sbjct: 482 IFGLGLAYAGSNREDVL-TLLLPVMGDSKSSMEVAGVTALACGMIAVGSCNGDVTSTILQ 540
Query: 769 DMVAYAKETQHEKILRGLAVGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAY 828
++ ++ + R L +G+ G+ E + ++ L + + AY
Sbjct: 541 TIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAY 600
Query: 829 CGSGSNVATKRLLH 842
GSG+ + ++LLH
Sbjct: 601 AGSGNVLKVQQLLH 614
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 110/258 (42%), Gaps = 36/258 (13%)
Query: 244 ATIIANAFMHSGTTSDQFLRDN-LEWLARATNWAKLTATASLGVIHRGHETEALAHMQSY 302
A+ N F+++ D+ L D+ +WL + + L+A ASLG+I L + Y
Sbjct: 373 ASSFVNGFVNAAFGQDKLLTDDGNKWLYKNKDHGMLSAAASLGMILLWDVDGGLTQIDKY 432
Query: 303 LPRETGPTSGYYEGGGLYALGLIHANHG---------AVINDYLLGQVKDATNEDDAVTG 353
L + Y + G L A G++ N G A+++DY+L N + G
Sbjct: 433 LYS----SEDYIKSGALLACGIV--NSGVRNECDPALALLSDYVL------HNSNTMRLG 480
Query: 354 EAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGL-AVGISFIMYGQLENAD---D 409
G +GL GS E + ++ +++ + G+ A+ I G N D
Sbjct: 481 SIFG--LGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSC-NGDVTST 537
Query: 410 LVRDLCEEKDAILRRSGMYTIAMAYCVSYL-----YFDLFSDLTYRIVKNRSGMYTI--A 462
+++ + E+ + L+ + + + +++L + + L RS T+
Sbjct: 538 ILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDV 597
Query: 463 MAYCGSGSNVATKRLLHV 480
AY GSG+ + ++LLH+
Sbjct: 598 CAYAGSGNVLKVQQLLHI 615
>sp|Q4FZT9|PSMD2_RAT 26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus
GN=Psmd2 PE=2 SV=1
Length = 908
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 29/254 (11%)
Query: 606 ATIIANAFMHSGTTSDQFLRDN-LEWLARATNWAKLTATASLGVIHRGHETEALAHMQSY 664
A+ N F+++ D+ L D+ +WL + + L+A ASLG+I L + Y
Sbjct: 373 ASSFVNGFVNAAFGQDKLLTDDGNKWLYKNKDHGMLSAAASLGMILLWDVDGGLTQIDKY 432
Query: 665 LPRETGPTSGYYEGGGLYALGLIHANHG---------AVINDYLLGQVKDATNEMVRHGG 715
L + Y + G L A G++ N G A+++DY+L +N M R G
Sbjct: 433 LYS----SEDYIKSGALLACGIV--NSGVRNECDPALALLSDYVLHN----SNTM-RLGS 481
Query: 716 CLGLGLAAMGSARDDIYEQLKFNLYQDDAVTGEAAGI---AMGLVLLGS----KSESAIQ 768
GLGLA GS R+D+ L + D + E AG+ A G++ +GS + + +Q
Sbjct: 482 IFGLGLAYAGSNREDVL-TLLLPVMGDSKSSMEVAGVTALACGMIAVGSCNGDVTSTILQ 540
Query: 769 DMVAYAKETQHEKILRGLAVGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAY 828
++ ++ + R L +G+ G+ E + ++ L + + AY
Sbjct: 541 TIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAY 600
Query: 829 CGSGSNVATKRLLH 842
GSG+ + ++LLH
Sbjct: 601 AGSGNVLKVQQLLH 614
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 110/258 (42%), Gaps = 36/258 (13%)
Query: 244 ATIIANAFMHSGTTSDQFLRDN-LEWLARATNWAKLTATASLGVIHRGHETEALAHMQSY 302
A+ N F+++ D+ L D+ +WL + + L+A ASLG+I L + Y
Sbjct: 373 ASSFVNGFVNAAFGQDKLLTDDGNKWLYKNKDHGMLSAAASLGMILLWDVDGGLTQIDKY 432
Query: 303 LPRETGPTSGYYEGGGLYALGLIHANHG---------AVINDYLLGQVKDATNEDDAVTG 353
L + Y + G L A G++ N G A+++DY+L N + G
Sbjct: 433 LYS----SEDYIKSGALLACGIV--NSGVRNECDPALALLSDYVL------HNSNTMRLG 480
Query: 354 EAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGL-AVGISFIMYGQLENAD---D 409
G +GL GS E + ++ +++ + G+ A+ I G N D
Sbjct: 481 SIFG--LGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSC-NGDVTST 537
Query: 410 LVRDLCEEKDAILRRSGMYTIAMAYCVSYL-----YFDLFSDLTYRIVKNRSGMYTI--A 462
+++ + E+ + L+ + + + +++L + + L RS T+
Sbjct: 538 ILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDV 597
Query: 463 MAYCGSGSNVATKRLLHV 480
AY GSG+ + ++LLH+
Sbjct: 598 CAYAGSGNVLKVQQLLHI 615
>sp|Q8VDM4|PSMD2_MOUSE 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus
GN=Psmd2 PE=1 SV=1
Length = 908
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 29/254 (11%)
Query: 606 ATIIANAFMHSGTTSDQFLRDN-LEWLARATNWAKLTATASLGVIHRGHETEALAHMQSY 664
A+ N F+++ D+ L D+ +WL + + L+A ASLG+I L + Y
Sbjct: 373 ASSFVNGFVNAAFGQDKLLTDDGNKWLYKNKDHGMLSAAASLGMILLWDVDGGLTQIDKY 432
Query: 665 LPRETGPTSGYYEGGGLYALGLIHANHG---------AVINDYLLGQVKDATNEMVRHGG 715
L + Y + G L A G++ N G A+++DY+L +N M R G
Sbjct: 433 LYS----SEDYIKSGALLACGIV--NSGVRNECDPALALLSDYVLHN----SNTM-RLGS 481
Query: 716 CLGLGLAAMGSARDDIYEQLKFNLYQDDAVTGEAAGI---AMGLVLLGS----KSESAIQ 768
GLGLA GS R+D+ L + D + E AG+ A G++ +GS + + +Q
Sbjct: 482 IFGLGLAYAGSNREDVL-TLLLPVMGDSKSSMEVAGVTALACGMIAVGSCNGDVTSTILQ 540
Query: 769 DMVAYAKETQHEKILRGLAVGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAY 828
++ ++ + R L +G+ G+ E + ++ L + + AY
Sbjct: 541 TIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAY 600
Query: 829 CGSGSNVATKRLLH 842
GSG+ + ++LLH
Sbjct: 601 AGSGNVLKVQQLLH 614
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 110/258 (42%), Gaps = 36/258 (13%)
Query: 244 ATIIANAFMHSGTTSDQFLRDN-LEWLARATNWAKLTATASLGVIHRGHETEALAHMQSY 302
A+ N F+++ D+ L D+ +WL + + L+A ASLG+I L + Y
Sbjct: 373 ASSFVNGFVNAAFGQDKLLTDDGNKWLYKNKDHGMLSAAASLGMILLWDVDGGLTQIDKY 432
Query: 303 LPRETGPTSGYYEGGGLYALGLIHANHG---------AVINDYLLGQVKDATNEDDAVTG 353
L + Y + G L A G++ N G A+++DY+L N + G
Sbjct: 433 LYS----SEDYIKSGALLACGIV--NSGVRNECDPALALLSDYVL------HNSNTMRLG 480
Query: 354 EAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGL-AVGISFIMYGQLENAD---D 409
G +GL GS E + ++ +++ + G+ A+ I G N D
Sbjct: 481 SIFG--LGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSC-NGDVTST 537
Query: 410 LVRDLCEEKDAILRRSGMYTIAMAYCVSYL-----YFDLFSDLTYRIVKNRSGMYTI--A 462
+++ + E+ + L+ + + + +++L + + L RS T+
Sbjct: 538 ILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDV 597
Query: 463 MAYCGSGSNVATKRLLHV 480
AY GSG+ + ++LLH+
Sbjct: 598 CAYAGSGNVLKVQQLLHI 615
>sp|Q5R9I6|PSMD2_PONAB 26S proteasome non-ATPase regulatory subunit 2 OS=Pongo abelii
GN=PSMD2 PE=2 SV=1
Length = 908
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 29/254 (11%)
Query: 606 ATIIANAFMHSGTTSDQFLRDN-LEWLARATNWAKLTATASLGVIHRGHETEALAHMQSY 664
A+ N F+++ D+ L D+ +WL + + L+A ASLG+I L + Y
Sbjct: 373 ASSFVNGFVNAAFGQDKLLTDDGNKWLYKNKDHGMLSAAASLGMILLWDVDGGLTQIDKY 432
Query: 665 LPRETGPTSGYYEGGGLYALGLIHANHG---------AVINDYLLGQVKDATNEMVRHGG 715
L + Y + G L A G++ N G A+++DY+L +N M R G
Sbjct: 433 LYS----SEDYIKSGALLACGIV--NSGVRNECDPALALLSDYVLHN----SNTM-RLGS 481
Query: 716 CLGLGLAAMGSARDDIYEQLKFNLYQDDAVTGEAAGI---AMGLVLLGS----KSESAIQ 768
GLGLA GS R+D+ L + D + E AG+ A G++ +GS + + +Q
Sbjct: 482 IFGLGLAYAGSNREDVL-TLLLPVMGDSKSSMEVAGVTALACGMIAVGSCNGDVTSTILQ 540
Query: 769 DMVAYAKETQHEKILRGLAVGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAY 828
++ ++ + R L +G+ G+ E + ++ L + + AY
Sbjct: 541 TIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAY 600
Query: 829 CGSGSNVATKRLLH 842
GSG+ + ++LLH
Sbjct: 601 AGSGNVLKVQQLLH 614
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 110/258 (42%), Gaps = 36/258 (13%)
Query: 244 ATIIANAFMHSGTTSDQFLRDN-LEWLARATNWAKLTATASLGVIHRGHETEALAHMQSY 302
A+ N F+++ D+ L D+ +WL + + L+A ASLG+I L + Y
Sbjct: 373 ASSFVNGFVNAAFGQDKLLTDDGNKWLYKNKDHGMLSAAASLGMILLWDVDGGLTQIDKY 432
Query: 303 LPRETGPTSGYYEGGGLYALGLIHANHG---------AVINDYLLGQVKDATNEDDAVTG 353
L + Y + G L A G++ N G A+++DY+L N + G
Sbjct: 433 LYS----SEDYIKSGALLACGIV--NSGVRNECDPALALLSDYVL------HNSNTMRLG 480
Query: 354 EAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGL-AVGISFIMYGQLENAD---D 409
G +GL GS E + ++ +++ + G+ A+ I G N D
Sbjct: 481 SIFG--LGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSC-NGDVTST 537
Query: 410 LVRDLCEEKDAILRRSGMYTIAMAYCVSYL-----YFDLFSDLTYRIVKNRSGMYTI--A 462
+++ + E+ + L+ + + + +++L + + L RS T+
Sbjct: 538 ILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDV 597
Query: 463 MAYCGSGSNVATKRLLHV 480
AY GSG+ + ++LLH+
Sbjct: 598 CAYAGSGNVLKVQQLLHI 615
>sp|Q7S8R8|RPN1_NEUCR 26S proteasome regulatory subunit rpn-1 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=rpn-1 PE=3 SV=2
Length = 902
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 114/250 (45%), Gaps = 22/250 (8%)
Query: 609 IANAFMHSGTTSDQFL---RDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYL 665
NAF+++G SD+ + +D W+ + + ++ ASLG + L H+ Y
Sbjct: 380 FVNAFVNAGFGSDKMMLVGKDKDSWVWKTKDEGMMSTVASLGTLLLWDVENGLDHVDKYT 439
Query: 666 PRETGPTSGYYEGGGLYALGLIHANHGAVINDYLLGQVKDAT-----NEMVRHGGCLGLG 720
E + G A+G+++ N ++ + + D N ++R +GLG
Sbjct: 440 YLEEEQI----QAGAYLAIGIMNTN-VRTDSEPAMALLADPDKLAHKNPLIRVATIMGLG 494
Query: 721 LAAMGSARDDIYEQLKFNLYQDDAVTGEA---AGIAMGLVLLGSKSESAIQDMVAYAKET 777
LA GS ++++ L N+ D + + A +A G++ +GS + + +V +
Sbjct: 495 LAYAGSCKEELLSFL-VNIISDPEESMQVSAMAALACGMIFVGSSNSEVSEAIVTTLLDE 553
Query: 778 Q-----HEKILRGLAVGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSG 832
+ ++K R LA+G+ + +G+ E D ++ L + + + + + A+ G+G
Sbjct: 554 ESGSRLNDKWSRFLALGLGLLYFGRQEQVDVILETLKAVEHPMAKPTAVLAEICAWAGTG 613
Query: 833 SNVATKRLLH 842
+ + + LLH
Sbjct: 614 AVLKIQELLH 623
Score = 39.3 bits (90), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 110/257 (42%), Gaps = 35/257 (13%)
Query: 247 IANAFMHSGTTSDQFL---RDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYL 303
NAF+++G SD+ + +D W+ + + ++ ASLG + L H+ Y
Sbjct: 380 FVNAFVNAGFGSDKMMLVGKDKDSWVWKTKDEGMMSTVASLGTLLLWDVENGLDHVDKYT 439
Query: 304 PRETGPTSGYYEGGGLYALGLIHAN-------HGAVINDYLLGQVKDATNEDDAVTGEAA 356
E + G A+G+++ N A++ D D + + A
Sbjct: 440 YLEEEQI----QAGAYLAIGIMNTNVRTDSEPAMALLAD------PDKLAHKNPLIRVAT 489
Query: 357 GIAMGLVLLGSKSE---SAIQDMVAYAKETQHEKILRGLAVGISFIMYGQLENADDLVRD 413
+ +GL GS E S + ++++ +E+ + LA G+ F+ E ++ +V
Sbjct: 490 IMGLGLAYAGSCKEELLSFLVNIISDPEESMQVSAMAALACGMIFVGSSNSEVSEAIVTT 549
Query: 414 LCEEKDAILRRSGMYTIAMAYCVSYLYF------DLFSDLTYRIVKNRSGMYTIAM---- 463
L +E+ R + ++ +A + LYF D+ + T + V++ T +
Sbjct: 550 LLDEESGS-RLNDKWSRFLALGLGLLYFGRQEQVDVILE-TLKAVEHPMAKPTAVLAEIC 607
Query: 464 AYCGSGSNVATKRLLHV 480
A+ G+G+ + + LLH+
Sbjct: 608 AWAGTGAVLKIQELLHI 624
>sp|Q6XJG8|RPN1B_ARATH 26S proteasome non-ATPase regulatory subunit 2 1B OS=Arabidopsis
thaliana GN=RPN1B PE=2 SV=1
Length = 891
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 23/182 (12%)
Query: 605 TATIIANAFMHSGTTSDQFL---RDNL-----EWLARATNWAKLTATASLGVIHRGHETE 656
+AT + NAF+++G D+ + D+ WL + K +A ASLG+I
Sbjct: 371 SATFV-NAFVNAGFGQDKLMTVPSDSTSGSAGNWLFKNKEHGKTSAVASLGMIQLWDVET 429
Query: 657 ALAHMQSYLPRETGPTSGYYEGGGLYALGLIHANHGAVIND-----YLLGQVKDATNEMV 711
L H+ Y P G L +G+++ + ND LL D + V
Sbjct: 430 GLGHLDKYFHSNDNPVVA----GALLGVGIVNC---GIKNDCDPAFALLSGYIDNEDSSV 482
Query: 712 RHGGCLGLGLAAMGSARDDIYEQLKFNLYQDDAVTG--EAAGIAMGLVLLGSKSESAIQD 769
R G +GLG+A GS D I +L L +A A +++G++ +GS +E Q
Sbjct: 483 RIGAIMGLGIAYAGSQNDQIKIRLSPILNDANAPLDVIAFAALSLGMIYVGSCNEEVAQS 542
Query: 770 MV 771
++
Sbjct: 543 II 544
>sp|Q9SIV2|RPN1A_ARATH 26S proteasome non-ATPase regulatory subunit 2 1A OS=Arabidopsis
thaliana GN=RPN1A PE=1 SV=2
Length = 891
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 606 ATIIANAFMHSGTTSDQFLR--------DNLEWLARATNWAKLTATASLGVIHRGHETEA 657
A NAF+++G D+ + + WL + K +A ASLG+I
Sbjct: 371 AATFVNAFVNAGFGQDKLMTVPSDSTTGSSGNWLFKNKEHGKTSAAASLGMIQLWDVDSG 430
Query: 658 LAHMQSYLPRETGPTSGYYEGGGLYALGLIHANHGAVIND-----YLLGQVKDATNEMVR 712
L+ + Y P G L +G+++ + ND LLG D + VR
Sbjct: 431 LSQLDKYFHSNDNPIIA----GALLGVGIVNC---GIKNDCDPALALLGDYIDKEDSSVR 483
Query: 713 HGGCLGLGLAAMGSARDDIYEQLKFNLYQDDAVTG--EAAGIAMGLVLLGSKSESAIQDM 770
G +GLG++ GS D I +L L A A +++G++ +GS +E Q +
Sbjct: 484 IGAIMGLGISYAGSQNDQIRNKLSPILNDAKAPLDVIAFASLSLGMIYVGSCNEEVAQSI 543
Query: 771 V 771
+
Sbjct: 544 I 544
>sp|P38764|RPN1_YEAST 26S proteasome regulatory subunit RPN1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPN1 PE=1 SV=3
Length = 993
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 14/246 (5%)
Query: 606 ATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYL 665
A+ N F++ G +D+ + DN W+ + +A AS+G I++ + + L + YL
Sbjct: 382 ASSFVNGFLNLGYCNDKLIVDNDNWVYKTKGDGMTSAVASIGSIYQWN-LDGLQQLDKYL 440
Query: 666 -PRETGPTSGYYEGGGLYALGLIHANHGAVINDYLLGQVKDATNE--MVRHGGCLGLGLA 722
E +G G G+ A G+ H + LL TN + LGLG+A
Sbjct: 441 YVDEPEVKAGALLGIGISASGV----HDGEVEPALLLLQDYVTNPDTKISSAAILGLGIA 496
Query: 723 AMGSARDDIYEQLKFNLYQDDAV--TGEAAGIAMGLVLLGS-KSESAIQDMVAYAKETQH 779
GS D++ L D T A +A+ V +G+ + M + + T
Sbjct: 497 FAGSKNDEVLGLLLPIAASTDLPIETAAMASLALAHVFVGTCNGDITTSIMDNFLERTAI 556
Query: 780 E---KILRGLAVGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVA 836
E +R LA+ + + GQ E DD++ + + + + + AY G+G +
Sbjct: 557 ELKTDWVRFLALALGILYMGQGEQVDDVLETISAIEHPMTSAIEVLVGSCAYTGTGDVLL 616
Query: 837 TKRLLH 842
+ LLH
Sbjct: 617 IQDLLH 622
Score = 40.8 bits (94), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 7/141 (4%)
Query: 244 ATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYL 303
A+ N F++ G +D+ + DN W+ + +A AS+G I++ + + L + YL
Sbjct: 382 ASSFVNGFLNLGYCNDKLIVDNDNWVYKTKGDGMTSAVASIGSIYQWN-LDGLQQLDKYL 440
Query: 304 -PRETGPTSGYYEGGGLYALGLIHANHGAVINDYLLGQVKDATNEDDAVTGEAAGIAMGL 362
E +G G G+ A G+ H + LL TN D ++ AA + +G+
Sbjct: 441 YVDEPEVKAGALLGIGISASGV----HDGEVEPALLLLQDYVTNPDTKISS-AAILGLGI 495
Query: 363 VLLGSKSESAIQDMVAYAKET 383
GSK++ + ++ A T
Sbjct: 496 AFAGSKNDEVLGLLLPIAAST 516
>sp|B2ZX90|FAS1_ORYSJ Chromatin assembly factor 1 subunit FSM OS=Oryza sativa subsp.
japonica GN=FSM PE=2 SV=1
Length = 940
Score = 40.8 bits (94), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 56/75 (74%), Gaps = 4/75 (5%)
Query: 910 KIRKKKKKKKEAEKMRKKKGAEKMKKKKKDAEKMKKKGAEKIGKKKKKKKKKKKKKKKKK 969
++RK++KK++E E +R++K EK + + K K ++K E+ K++K+++K++ + +K++
Sbjct: 354 RMRKQQKKQQE-EALREQKRREKEEAEMK---KQQRKQEEEAQKEQKRREKEEAETRKQQ 409
Query: 970 KKKKKEAEKMKKKTE 984
KK+++EAEK +K+ E
Sbjct: 410 KKQQEEAEKEQKRRE 424
Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 60/77 (77%), Gaps = 6/77 (7%)
Query: 912 RKKKKKKKEA---EKMRKKKGAE---KMKKKKKDAEKMKKKGAEKIGKKKKKKKKKKKKK 965
+++KK+++EA +K R+K+ AE + +K++++A+K +K+ ++ + +K++KK++++
Sbjct: 357 KQQKKQQEEALREQKRREKEEAEMKKQQRKQEEEAQKEQKRREKEEAETRKQQKKQQEEA 416
Query: 966 KKKKKKKKKEAEKMKKK 982
+K++K+++KEA ++KK+
Sbjct: 417 EKEQKRREKEAVQLKKQ 433
>sp|Q75CK5|NST1_ASHGO Stress response protein NST1 OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=NST1 PE=3
SV=2
Length = 1207
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 66/101 (65%), Gaps = 9/101 (8%)
Query: 897 KKRTRRKKKKGAEKIRKKKKKKKEAEKMRKKKGAEKMKK---------KKKDAEKMKKKG 947
++ R K++ A ++++++ ++K+ E+ ++KK E K+ +++ +MK++
Sbjct: 623 EEEARLKQEAEAREMQRRENQRKKVEEAKRKKDLEMRKRLEEQRRREEEQERQRRMKEEI 682
Query: 948 AEKIGKKKKKKKKKKKKKKKKKKKKKKEAEKMKKKTEEAEK 988
K +++K+++++++K+K++K+ KK ++ ++KKK EE +K
Sbjct: 683 KRKRDQERKQREEEQRKRKQEKELKKLQSLEVKKKREEDDK 723
>sp|A6RW62|NST1_BOTFB Stress response protein nst1 OS=Botryotinia fuckeliana (strain
B05.10) GN=nst1 PE=3 SV=1
Length = 1168
Score = 36.2 bits (82), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 50/75 (66%), Gaps = 8/75 (10%)
Query: 914 KKKKKKEAEKMRKKKGAEKMKKKKKDAEKMKKKGAEKIGKKKKKKKKKKKKKKKKKKKKK 973
++K +K+AEK ++ ++++KK +A+++K++ + +KKK+ +KK ++++ +
Sbjct: 529 EEKARKDAEKAAEEASLREIEEKKAEAQRLKRE--------ENRKKKEAQKKADEEERVR 580
Query: 974 KEAEKMKKKTEEAEK 988
KE+EK ++ E+ E+
Sbjct: 581 KESEKQRRLQEQRER 595
Score = 33.9 bits (76), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 50/78 (64%), Gaps = 8/78 (10%)
Query: 909 EKIRKKKKKKKEAEKMR----KKKGAEKMKKKKKDAEKMKKKGAEKIGKKKKKKKKKKKK 964
EK RK +K E +R KK A+++K++ E KKK A+K ++++ +K+ +K
Sbjct: 530 EKARKDAEKAAEEASLREIEEKKAEAQRLKRE----ENRKKKEAQKKADEEERVRKESEK 585
Query: 965 KKKKKKKKKKEAEKMKKK 982
+++ +++++++AE+ +K+
Sbjct: 586 QRRLQEQRERQAEQERKQ 603
>sp|Q2GZN9|NST1_CHAGB Stress response protein NST1 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=NST1 PE=3 SV=1
Length = 1255
Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 41/56 (73%)
Query: 910 KIRKKKKKKKEAEKMRKKKGAEKMKKKKKDAEKMKKKGAEKIGKKKKKKKKKKKKK 965
K ++++++KEAE++RK + E+ ++K ++A + +KK E+ ++K+ +++K++K
Sbjct: 639 KAEEEERQRKEAERLRKIQDREEAERKAREAREREKKTREEARLREKEAREQKERK 694
>sp|A4R2R1|NST1_MAGO7 Stress response protein NST1 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=NST1 PE=3 SV=2
Length = 1311
Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 65/98 (66%), Gaps = 5/98 (5%)
Query: 896 RKKRTRRKKKKGAEKIRK-KKKKKKEAEKMRKKKGAEKMKKKKKDAEKMKKKGA----EK 950
RK +++K AE++R+ +++K+++AE+ RK + A++ +KK K+ K ++K A E+
Sbjct: 690 RKAEEEERQRKEAERLRRAQEQKERQAEQDRKAREAKEKEKKAKEEAKQREKAARELKER 749
Query: 951 IGKKKKKKKKKKKKKKKKKKKKKKEAEKMKKKTEEAEK 988
+++K+K K++ +K+ K K +KEA + ++K E A +
Sbjct: 750 EARERKEKADKERLEKEAKIKAEKEAREAQRKAERASQ 787
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 353,051,040
Number of Sequences: 539616
Number of extensions: 15897518
Number of successful extensions: 316110
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2651
Number of HSP's successfully gapped in prelim test: 1331
Number of HSP's that attempted gapping in prelim test: 167943
Number of HSP's gapped (non-prelim): 71203
length of query: 988
length of database: 191,569,459
effective HSP length: 127
effective length of query: 861
effective length of database: 123,038,227
effective search space: 105935913447
effective search space used: 105935913447
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)