Your job contains 1 sequence.
>psy6893
MDVFEAAIKQMTPPRSFTTRSRWPCPPFSRVHSALKSCVPWCLAMSSIQSRSFRAQILRT
LVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSADDDLMAAQIGFDLYESATQ
AFLASVLQELKTCAPIPDATHVVVKVPVEGAPTPATPDTEAPTPAPGTESGPSSTTPGPE
TKTLESLNEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSI
CHTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQ
SYLPRETGPTSGYYEGGGLYALGLIHANHGAVINDYLLGQVKDATNEDDAVTGEAAGIAM
GLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQLENADDLVRDLCEEKDA
ILRRSGMYTIAMAYCVSYLYFDLFSDLTYRIVKNRSGMYTIAMAYCGSGSNVATKRLLHV
AVSDVNDDVRREAVTALGFILFRTLFYVAPACTRSPWPGVISLLDDPMIELKEFSLKKLN
DIVDDFWPENEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRV
SICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAH
MQSYLPRETGPTSGYYEGGGLYALGLIHANHGAVINDYLLGQVKDATNEMVRHGGCLGLG
LAAMGSARDDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHE
KILRGLAVGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRL
LHDAILRRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFRKKRT
RRKKKKGAEKIRKKKKKKKEAEKMRKKKGAEKMKKKKKDAEKMKKKGAEKIGKKKKKKKK
KKKKKKKKKKKKKKEAEKMKKKTEEAEK
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6893
(988 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0028692 - symbol:Rpn2 "Regulatory particle non-ATP... 1035 2.3e-114 2
UNIPROTKB|E1C5P3 - symbol:PSMD1 "26S proteasome non-ATPas... 996 5.6e-109 2
UNIPROTKB|F1NUT6 - symbol:PSMD1 "26S proteasome non-ATPas... 994 9.1e-109 2
UNIPROTKB|Q5F418 - symbol:PSMD1 "26S proteasome non-ATPas... 994 9.1e-109 2
MGI|MGI:1917497 - symbol:Psmd1 "proteasome (prosome, macr... 994 9.1e-109 2
ZFIN|ZDB-GENE-040426-810 - symbol:psmd1 "proteasome (pros... 992 9.1e-109 2
UNIPROTKB|Q99460 - symbol:PSMD1 "26S proteasome non-ATPas... 991 1.9e-108 2
UNIPROTKB|Q5R5S4 - symbol:PSMD1 "26S proteasome non-ATPas... 991 1.9e-108 2
UNIPROTKB|F1PX57 - symbol:PSMD1 "Uncharacterized protein"... 990 2.4e-108 2
UNIPROTKB|J9P4R4 - symbol:PSMD1 "Uncharacterized protein"... 990 2.4e-108 2
UNIPROTKB|A7MBA2 - symbol:PSMD1 "Uncharacterized protein"... 990 2.4e-108 2
UNIPROTKB|F1LRN6 - symbol:Psmd1 "26S proteasome non-ATPas... 988 3.9e-108 2
UNIPROTKB|G3V8B6 - symbol:Psmd1 "26S proteasome non-ATPas... 988 3.9e-108 2
RGD|621669 - symbol:Psmd1 "proteasome (prosome, macropain... 988 3.9e-108 2
DICTYBASE|DDB_G0287953 - symbol:psmD1 "26S proteasome reg... 669 1.9e-81 2
POMBASE|SPBC17D11.07c - symbol:rpn2 "19S proteasome regul... 651 4.0e-76 2
TAIR|locus:2046402 - symbol:AT2G32730 species:3702 "Arabi... 707 4.1e-76 2
ASPGD|ASPL0000047917 - symbol:AN1700 species:162425 "Emer... 632 1.8e-75 2
TAIR|locus:2010672 - symbol:AT1G04810 species:3702 "Arabi... 707 6.5e-75 2
CGD|CAL0003585 - symbol:RPN2 species:5476 "Candida albica... 600 8.1e-64 2
SGD|S000001337 - symbol:RPN2 "Subunit of the 26S proteaso... 541 2.0e-55 2
WB|WBGene00004459 - symbol:rpn-2 species:6239 "Caenorhabd... 495 9.0e-54 2
UNIPROTKB|Q18115 - symbol:rpn-2 "26S proteasome non-ATPas... 495 9.0e-54 2
GENEDB_PFALCIPARUM|PF14_0632 - symbol:PF14_0632 "26S prot... 406 4.4e-43 2
UNIPROTKB|Q8IKH3 - symbol:PF14_0632 "26S proteasome subun... 406 4.4e-43 2
CGD|CAL0006334 - symbol:RPN1 species:5476 "Candida albica... 125 0.00054 2
POMBASE|SPBP19A11.03c - symbol:mts4 "19S proteasome regul... 125 0.00060 1
>FB|FBgn0028692 [details] [associations]
symbol:Rpn2 "Regulatory particle non-ATPase 2" species:7227
"Drosophila melanogaster" [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0004175 "endopeptidase activity"
evidence=IDA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 EMBL:AE014297 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006508 GO:GO:0050790
GO:GO:0006974 GO:GO:0004175 GO:GO:0042176 GO:GO:0008540
BRENDA:3.4.25.1 eggNOG:COG5116 GeneTree:ENSGT00550000074915
KO:K03032 OMA:CVENAEL Pfam:PF01851 EMBL:AF145303 EMBL:AF186594
EMBL:AF312231 EMBL:AY069503 EMBL:BT001598 EMBL:BT044102
RefSeq:NP_651677.2 UniGene:Dm.6875 ProteinModelPortal:Q9V3P6
SMR:Q9V3P6 IntAct:Q9V3P6 MINT:MINT-745147 STRING:Q9V3P6
PaxDb:Q9V3P6 PRIDE:Q9V3P6 EnsemblMetazoa:FBtr0085385 GeneID:43449
KEGG:dme:Dmel_CG11888 UCSC:CG11888-RA CTD:6185 FlyBase:FBgn0028692
InParanoid:Q9V3P6 OrthoDB:EOG4BVQ8J PhylomeDB:Q9V3P6
GenomeRNAi:43449 NextBio:834007 Bgee:Q9V3P6 GermOnline:CG11888
Uniprot:Q9V3P6
Length = 1020
Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
Identities = 248/474 (52%), Positives = 299/474 (63%)
Query: 43 LAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSAD 102
+ MS IQ+R FR ++LR LV LY L VPDYVNM QC I+L+DP +VA +L L S +
Sbjct: 183 VTMSLIQNRGFRNEVLRCLVSLYRDLGVPDYVNMCQCLIFLEDPFAVAEMLDNLTRSSVE 242
Query: 103 -DDLMAAQIGFDLYESATQAFLASVLQELKTCAPIPDATHVVVKVPVXXXXXXXXXXXXX 161
++LMA QI FDLYESATQ FL +VLQ LK APIP A K P
Sbjct: 243 TNNLMAYQIAFDLYESATQEFLGNVLQHLKNTAPIPTALPSTFK-PQGTTSEDGAKSEGD 301
Query: 162 XXXXXXXXSGPSSTTPGPETKTLESLNEKEKQLQARITKLSKILSGEVSIDLHLQFLIRS 221
+ + E +T++SLNE EK Q I KL ILSGEVSIDL LQFLIRS
Sbjct: 302 KSKSDEDITEETPADDKVE-RTIDSLNEVEKLHQKNIEKLISILSGEVSIDLQLQFLIRS 360
Query: 222 NKTDMLILKNTKESIRVSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTAT 281
N D+ +L+ TKE++RVSICHTAT+IANAFMHSGTTSDQFLRDNL+WLARATNWAKLTAT
Sbjct: 361 NHADLQVLRGTKEAVRVSICHTATVIANAFMHSGTTSDQFLRDNLDWLARATNWAKLTAT 420
Query: 282 ASLGVIHRGHETEALAHMQSYLPRETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQV 341
ASLGVIHRGHE ++LA MQSYLP+E GP+S IHANHGA I DYLL Q+
Sbjct: 421 ASLGVIHRGHEKDSLALMQSYLPKEAGPSSGYSEGGALYALGLIHANHGANIIDYLLQQL 480
Query: 342 KDATNEDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAK-ETQHEKILRGLAVGISF-- 398
KDA NE+ G +GL L G + QD+ K + + G A GI+
Sbjct: 481 KDAQNENVRHGG-----CLGLGLAGMGTHR--QDLYEQLKFNLYQDDAVTGEAAGIAMGM 533
Query: 399 IMYGQLENA---DDLVRDLCE-EKDAILRRSGM-YTIAMAYCVSY---LYFDLFSDLTYR 450
+M G +NA +D+V E + + ILR + ++ M + L L SD
Sbjct: 534 VMLGS-KNAQAIEDMVSYAQETQHEKILRGLAVGISLTMFSRLEEADPLVTSLSSDKDP- 591
Query: 451 IVKNRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFRT 504
V RSGMYTIAMAY G+GSN A ++LLHVAVSDVNDDVRR AVTA+GFILFR+
Sbjct: 592 -VLRRSGMYTIAMAYNGTGSNKAIRKLLHVAVSDVNDDVRRAAVTAIGFILFRS 644
Score = 1025 (365.9 bits), Expect = 2.3e-114, Sum P(2) = 2.3e-114
Identities = 215/348 (61%), Positives = 249/348 (71%)
Query: 550 NEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSICHTATII 609
NE EK Q I KL ILSGEVSIDL LQFLIRSN D+ +L+ TKE++RVSICHTAT+I
Sbjct: 327 NEVEKLHQKNIEKLISILSGEVSIDLQLQFLIRSNHADLQVLRGTKEAVRVSICHTATVI 386
Query: 610 ANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRET 669
ANAFMHSGTTSDQFLRDNL+WLARATNWAKLTATASLGVIHRGHE ++LA MQSYLP+E
Sbjct: 387 ANAFMHSGTTSDQFLRDNLDWLARATNWAKLTATASLGVIHRGHEKDSLALMQSYLPKEA 446
Query: 670 GPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQVKDATNEMVRHXXXXXXXXXXXXXXRD 729
GP+S IHANHGA I DYLL Q+KDA NE VRH R
Sbjct: 447 GPSSGYSEGGALYALGLIHANHGANIIDYLLQQLKDAQNENVRHGGCLGLGLAGMGTHRQ 506
Query: 730 DIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVG 789
D+YEQLKFNLYQDDAVTGEAAGIAMG+V+LGSK+ AI+DMV+YA+ETQHEKILRGLAVG
Sbjct: 507 DLYEQLKFNLYQDDAVTGEAAGIAMGMVMLGSKNAQAIEDMVSYAQETQHEKILRGLAVG 566
Query: 790 ISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAI---- 845
IS M+ +LE AD LV L +KD +LRRSGMYTIAMAY G+GSN A ++LLH A+
Sbjct: 567 ISLTMFSRLEEADPLVTSLSSDKDPVLRRSGMYTIAMAYNGTGSNKAIRKLLHVAVSDVN 626
Query: 846 --LRRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALG 891
+RR+ + I S + ++ + N VR A ALG
Sbjct: 627 DDVRRAAVTAIGFILFRSPEQCPS--VVSLLAESYNPHVRYGAAMALG 672
Score = 223 (83.6 bits), Expect = 6.9e-22, Sum P(2) = 6.9e-22
Identities = 67/155 (43%), Positives = 87/155 (56%)
Query: 751 GIAMGLVLLGSKSESAIQDMVAYAK-ETQHEKILRGLAVGISF--IMYGQLENA---DDL 804
G +GL L G + QD+ K + + G A GI+ +M G +NA +D+
Sbjct: 491 GGCLGLGLAGMGTHR--QDLYEQLKFNLYQDDAVTGEAAGIAMGMVMLGS-KNAQAIEDM 547
Query: 805 VRDLCE-EKDAILR--RSGMYTIAMAYCGSGSNVATKRLLH-DAILRRSGMYTIAMAYCG 860
V E + + ILR G+ + + T D +LRRSGMYTIAMAY G
Sbjct: 548 VSYAQETQHEKILRGLAVGISLTMFSRLEEADPLVTSLSSDKDPVLRRSGMYTIAMAYNG 607
Query: 861 SGSNVATKRLLHVAVSDVNDDVRREAVTALGFILF 895
+GSN A ++LLHVAVSDVNDDVRR AVTA+GFILF
Sbjct: 608 TGSNKAIRKLLHVAVSDVNDDVRRAAVTAIGFILF 642
Score = 123 (48.4 bits), Expect = 2.3e-114, Sum P(2) = 2.3e-114
Identities = 22/31 (70%), Positives = 29/31 (93%)
Query: 519 GVISLLDDPMIELKEFSLKKLNDIVDDFWPE 549
G+ISLLD+PM +LK F+LKKL++IVD+FWPE
Sbjct: 8 GIISLLDEPMPDLKVFALKKLDNIVDEFWPE 38
Score = 68 (29.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 22/101 (21%), Positives = 42/101 (41%)
Query: 733 EQLKFNLYQD-DAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGIS 791
+ L +L D D V + + + G+ S AI+ ++ A ++ + R I
Sbjct: 579 DPLVTSLSSDKDPVLRRSGMYTIAMAYNGTGSNKAIRKLLHVAVSDVNDDVRRAAVTAIG 638
Query: 792 FIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSG 832
FI++ E +V L E + +R + +A G+G
Sbjct: 639 FILFRSPEQCPSVVSLLAESYNPHVRYGAAMALGIACAGTG 679
>UNIPROTKB|E1C5P3 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9031 "Gallus gallus" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 OMA:CVENAEL Pfam:PF01851
EMBL:AADN02020638 IPI:IPI00579067 Ensembl:ENSGALT00000012418
ArrayExpress:E1C5P3 Uniprot:E1C5P3
Length = 958
Score = 996 (355.7 bits), Expect = 5.6e-109, Sum P(2) = 5.6e-109
Identities = 188/294 (63%), Positives = 232/294 (78%)
Query: 552 KEKQLQARITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSICHTATIIAN 611
K + + +I+K+ KILSGE++I+LHLQFLIR+N TD++ILKNTK+++R S+CHTAT+IAN
Sbjct: 317 KNPEPKDQISKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAVRNSVCHTATVIAN 376
Query: 612 AFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRETGP 671
+FMH GTTSDQFLRDNLEWLARATNWAK TATASLGVIH+GHE EAL M +YLP++T P
Sbjct: 377 SFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSP 436
Query: 672 TSXXXXXXXXXXXXXIHANHGAVINDYLLGQVKDATNEMVRHXXXXXXXXXXXXXXRDDI 731
S IHANHG I DYLL Q+K+A+N++VRH R D+
Sbjct: 437 GSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDV 496
Query: 732 YEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGIS 791
Y+ LK NLYQDDAVTGEAAG+A+GLV+LGSK+ AI+DMV YA+ETQHEKILRGLAVGI+
Sbjct: 497 YDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAVGIA 556
Query: 792 FIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAI 845
+MYG++E AD L+ LC +KD ILRRSGMYT+AMAYCGSG+N A +RLLH A+
Sbjct: 557 LVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAV 610
Score = 959 (342.6 bits), Expect = 1.8e-96, P = 1.8e-96
Identities = 228/493 (46%), Positives = 304/493 (61%)
Query: 43 LAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSAD 102
L MS +Q++ FR ++LR LV++Y +L PD++N+ QC I+LDDP++V+++L KLV D
Sbjct: 183 LCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLV--KED 240
Query: 103 DDLMAAQIGFDLYESATQAFLASVLQELKTCAPIPDATHVVVKVPVXXXXXXXXXXXXXX 162
+ LMA QI FDLYESA+Q FL+SV+Q L+T P + VP
Sbjct: 241 NLLMAYQICFDLYESASQQFLSSVIQNLRTVGT-P-----IASVP-GSTNTGTVPGSEKD 293
Query: 163 XXXXXXXSGPSSTTPGPETKTLESLNEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSN 222
P ST G K+ E + K + + +I+K+ KILSGE++I+LHLQFLIR+N
Sbjct: 294 SDAMEAEEKPGSTCVG---KSAE-IYVKNPEPKDQISKMIKILSGEMAIELHLQFLIRNN 349
Query: 223 KTDMLILKNTKESIRVSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATA 282
TD++ILKNTK+++R S+CHTAT+IAN+FMH GTTSDQFLRDNLEWLARATNWAK TATA
Sbjct: 350 NTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATA 409
Query: 283 SLGVIHRGHETEALAHMQSYLPRETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQVK 342
SLGVIH+GHE EAL M +YLP++T P S IHANHG I DYLL Q+K
Sbjct: 410 SLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLK 469
Query: 343 DATNEDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEK-ILRGLAVGISF--I 399
+A+N+ + + +GL +G+ A QD+ K ++ + G A G++ +
Sbjct: 470 NASND---IVRHGGSLGLGLAAMGT----ARQDVYDLLKTNLYQDDAVTGEAAGLALGLV 522
Query: 400 MYGQLENA---DDLVRDLCEEKDAILRRSGMYTIAMAYCVSYLYFDLFSDLTYRI---VK 453
M G +NA +D+V E + + R IA+ D + R +
Sbjct: 523 MLGS-KNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPIL 581
Query: 454 NRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFRTLFYVAPACT 513
RSGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV +LGFILFRT C
Sbjct: 582 RRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRT----PEQC- 636
Query: 514 RSPWPGVISLLDD 526
P V+SLL +
Sbjct: 637 ----PSVVSLLSE 645
Score = 243 (90.6 bits), Expect = 7.8e-22, Sum P(2) = 7.8e-22
Identities = 72/177 (40%), Positives = 98/177 (55%)
Query: 729 DDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEK-ILRGLA 787
D + QLK N D + + +GL +G+ A QD+ K ++ + G A
Sbjct: 462 DYLLNQLK-NASND--IVRHGGSLGLGLAAMGT----ARQDVYDLLKTNLYQDDAVTGEA 514
Query: 788 VGISF--IMYGQLENA---DDLVRDLCEEKDAILRRSGMYTIAMAYCG--SGSNVATKRL 840
G++ +M G +NA +D+V E + + R IA+ G ++ + L
Sbjct: 515 AGLALGLVMLGS-KNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESL 573
Query: 841 LHDA--ILRRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILF 895
D ILRRSGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV +LGFILF
Sbjct: 574 CRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILF 630
Score = 101 (40.6 bits), Expect = 5.6e-109, Sum P(2) = 5.6e-109
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 519 GVISLLDDPMIELKEFSLKKLNDIVDDFWPE 549
G+ISLLD+ +LKEF+L KLN +V+DFW E
Sbjct: 7 GIISLLDEEEPQLKEFALHKLNAVVNDFWAE 37
>UNIPROTKB|F1NUT6 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9031 "Gallus gallus" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 Pfam:PF01851 IPI:IPI00598268
EMBL:AADN02020638 Ensembl:ENSGALT00000012419 ArrayExpress:F1NUT6
Uniprot:F1NUT6
Length = 955
Score = 994 (355.0 bits), Expect = 9.1e-109, Sum P(2) = 9.1e-109
Identities = 187/287 (65%), Positives = 229/287 (79%)
Query: 559 RITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSICHTATIIANAFMHSGT 618
+I+K+ KILSGE++I+LHLQFLIR+N TD++ILKNTK+++R S+CHTAT+IAN+FMH GT
Sbjct: 321 QISKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAVRNSVCHTATVIANSFMHCGT 380
Query: 619 TSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRETGPTSXXXXX 678
TSDQFLRDNLEWLARATNWAK TATASLGVIH+GHE EAL M +YLP++T P S
Sbjct: 381 TSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEG 440
Query: 679 XXXXXXXXIHANHGAVINDYLLGQVKDATNEMVRHXXXXXXXXXXXXXXRDDIYEQLKFN 738
IHANHG I DYLL Q+K+A+N++VRH R D+Y+ LK N
Sbjct: 441 GGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTN 500
Query: 739 LYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQL 798
LYQDDAVTGEAAG+A+GLV+LGSK+ AI+DMV YA+ETQHEKILRGLAVGI+ +MYG++
Sbjct: 501 LYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRM 560
Query: 799 ENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAI 845
E AD L+ LC +KD ILRRSGMYT+AMAYCGSG+N A +RLLH A+
Sbjct: 561 EEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAV 607
Score = 958 (342.3 bits), Expect = 2.2e-96, P = 2.2e-96
Identities = 229/493 (46%), Positives = 304/493 (61%)
Query: 43 LAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSAD 102
L MS +Q++ FR ++LR LV++Y +L PD++N+ QC I+LDDP++V+++L KLV D
Sbjct: 183 LCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLV--KED 240
Query: 103 DDLMAAQIGFDLYESATQAFLASVLQELKTCAPIPDATHVVVKVPVXXXXXXXXXXXXXX 162
+ LMA QI FDLYESA+Q FL+SV+Q L+T P + VP
Sbjct: 241 NLLMAYQICFDLYESASQQFLSSVIQNLRTVGT-P-----IASVP-GSTNTGTVPGSEKD 293
Query: 163 XXXXXXXSGPSSTTPGPETKTLESLNEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSN 222
P ST G K+ E +N + K +I+K+ KILSGE++I+LHLQFLIR+N
Sbjct: 294 SDAMEAEEKPGSTCVG---KSAE-INPEPKD---QISKMIKILSGEMAIELHLQFLIRNN 346
Query: 223 KTDMLILKNTKESIRVSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATA 282
TD++ILKNTK+++R S+CHTAT+IAN+FMH GTTSDQFLRDNLEWLARATNWAK TATA
Sbjct: 347 NTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATA 406
Query: 283 SLGVIHRGHETEALAHMQSYLPRETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQVK 342
SLGVIH+GHE EAL M +YLP++T P S IHANHG I DYLL Q+K
Sbjct: 407 SLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLK 466
Query: 343 DATNEDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEK-ILRGLAVGISF--I 399
+A+N+ + + +GL +G+ A QD+ K ++ + G A G++ +
Sbjct: 467 NASND---IVRHGGSLGLGLAAMGT----ARQDVYDLLKTNLYQDDAVTGEAAGLALGLV 519
Query: 400 MYGQLENA---DDLVRDLCEEKDAILRRSGMYTIAMAYCVSYLYFDLFSDLTYRI---VK 453
M G +NA +D+V E + + R IA+ D + R +
Sbjct: 520 MLGS-KNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPIL 578
Query: 454 NRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFRTLFYVAPACT 513
RSGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV +LGFILFRT C
Sbjct: 579 RRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRT----PEQC- 633
Query: 514 RSPWPGVISLLDD 526
P V+SLL +
Sbjct: 634 ----PSVVSLLSE 642
Score = 243 (90.6 bits), Expect = 7.7e-22, Sum P(2) = 7.7e-22
Identities = 72/177 (40%), Positives = 98/177 (55%)
Query: 729 DDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEK-ILRGLA 787
D + QLK N D + + +GL +G+ A QD+ K ++ + G A
Sbjct: 459 DYLLNQLK-NASND--IVRHGGSLGLGLAAMGT----ARQDVYDLLKTNLYQDDAVTGEA 511
Query: 788 VGISF--IMYGQLENA---DDLVRDLCEEKDAILRRSGMYTIAMAYCG--SGSNVATKRL 840
G++ +M G +NA +D+V E + + R IA+ G ++ + L
Sbjct: 512 AGLALGLVMLGS-KNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESL 570
Query: 841 LHDA--ILRRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILF 895
D ILRRSGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV +LGFILF
Sbjct: 571 CRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILF 627
Score = 101 (40.6 bits), Expect = 9.1e-109, Sum P(2) = 9.1e-109
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 519 GVISLLDDPMIELKEFSLKKLNDIVDDFWPE 549
G+ISLLD+ +LKEF+L KLN +V+DFW E
Sbjct: 7 GIISLLDEEEPQLKEFALHKLNAVVNDFWAE 37
>UNIPROTKB|Q5F418 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9031 "Gallus gallus" [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0042176
GO:GO:0022624 eggNOG:COG5116 HOGENOM:HOG000189403 KO:K03032
Pfam:PF01851 EMBL:AJ851482 IPI:IPI00598268 RefSeq:NP_001012618.1
UniGene:Gga.12538 ProteinModelPortal:Q5F418 STRING:Q5F418
PRIDE:Q5F418 GeneID:424926 KEGG:gga:424926 CTD:5707
HOVERGEN:HBG007543 NextBio:20827189 Uniprot:Q5F418
Length = 955
Score = 994 (355.0 bits), Expect = 9.1e-109, Sum P(2) = 9.1e-109
Identities = 187/287 (65%), Positives = 229/287 (79%)
Query: 559 RITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSICHTATIIANAFMHSGT 618
+I+K+ KILSGE++I+LHLQFLIR+N TD++ILKNTK+++R S+CHTAT+IAN+FMH GT
Sbjct: 321 QISKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAVRNSVCHTATVIANSFMHCGT 380
Query: 619 TSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRETGPTSXXXXX 678
TSDQFLRDNLEWLARATNWAK TATASLGVIH+GHE EAL M +YLP++T P S
Sbjct: 381 TSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEG 440
Query: 679 XXXXXXXXIHANHGAVINDYLLGQVKDATNEMVRHXXXXXXXXXXXXXXRDDIYEQLKFN 738
IHANHG I DYLL Q+K+A+N++VRH R D+Y+ LK N
Sbjct: 441 GGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTN 500
Query: 739 LYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQL 798
LYQDDAVTGEAAG+A+GLV+LGSK+ AI+DMV YA+ETQHEKILRGLAVGI+ +MYG++
Sbjct: 501 LYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRM 560
Query: 799 ENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAI 845
E AD L+ LC +KD ILRRSGMYT+AMAYCGSG+N A +RLLH A+
Sbjct: 561 EEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAV 607
Score = 958 (342.3 bits), Expect = 2.2e-96, P = 2.2e-96
Identities = 229/493 (46%), Positives = 304/493 (61%)
Query: 43 LAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSAD 102
L MS +Q++ FR ++LR LV++Y +L PD++N+ QC I+LDDP++V+++L KLV D
Sbjct: 183 LCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLV--KED 240
Query: 103 DDLMAAQIGFDLYESATQAFLASVLQELKTCAPIPDATHVVVKVPVXXXXXXXXXXXXXX 162
+ LMA QI FDLYESA+Q FL+SV+Q L+T P + VP
Sbjct: 241 NLLMAYQICFDLYESASQQFLSSVIQNLRTVGT-P-----IASVP-GSTNTGTVPGSEKD 293
Query: 163 XXXXXXXSGPSSTTPGPETKTLESLNEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSN 222
P ST G K+ E +N + K +I+K+ KILSGE++I+LHLQFLIR+N
Sbjct: 294 SDAMEAEEKPGSTCVG---KSAE-INPEPKD---QISKMIKILSGEMAIELHLQFLIRNN 346
Query: 223 KTDMLILKNTKESIRVSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATA 282
TD++ILKNTK+++R S+CHTAT+IAN+FMH GTTSDQFLRDNLEWLARATNWAK TATA
Sbjct: 347 NTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATA 406
Query: 283 SLGVIHRGHETEALAHMQSYLPRETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQVK 342
SLGVIH+GHE EAL M +YLP++T P S IHANHG I DYLL Q+K
Sbjct: 407 SLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLK 466
Query: 343 DATNEDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEK-ILRGLAVGISF--I 399
+A+N+ + + +GL +G+ A QD+ K ++ + G A G++ +
Sbjct: 467 NASND---IVRHGGSLGLGLAAMGT----ARQDVYDLLKTNLYQDDAVTGEAAGLALGLV 519
Query: 400 MYGQLENA---DDLVRDLCEEKDAILRRSGMYTIAMAYCVSYLYFDLFSDLTYRI---VK 453
M G +NA +D+V E + + R IA+ D + R +
Sbjct: 520 MLGS-KNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPIL 578
Query: 454 NRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFRTLFYVAPACT 513
RSGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV +LGFILFRT C
Sbjct: 579 RRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRT----PEQC- 633
Query: 514 RSPWPGVISLLDD 526
P V+SLL +
Sbjct: 634 ----PSVVSLLSE 642
Score = 243 (90.6 bits), Expect = 7.7e-22, Sum P(2) = 7.7e-22
Identities = 72/177 (40%), Positives = 98/177 (55%)
Query: 729 DDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEK-ILRGLA 787
D + QLK N D + + +GL +G+ A QD+ K ++ + G A
Sbjct: 459 DYLLNQLK-NASND--IVRHGGSLGLGLAAMGT----ARQDVYDLLKTNLYQDDAVTGEA 511
Query: 788 VGISF--IMYGQLENA---DDLVRDLCEEKDAILRRSGMYTIAMAYCG--SGSNVATKRL 840
G++ +M G +NA +D+V E + + R IA+ G ++ + L
Sbjct: 512 AGLALGLVMLGS-KNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESL 570
Query: 841 LHDA--ILRRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILF 895
D ILRRSGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV +LGFILF
Sbjct: 571 CRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILF 627
Score = 101 (40.6 bits), Expect = 9.1e-109, Sum P(2) = 9.1e-109
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 519 GVISLLDDPMIELKEFSLKKLNDIVDDFWPE 549
G+ISLLD+ +LKEF+L KLN +V+DFW E
Sbjct: 7 GIISLLDEEEPQLKEFALHKLNAVVNDFWAE 37
>MGI|MGI:1917497 [details] [associations]
symbol:Psmd1 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 1" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
MGI:MGI:1917497 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0042176
GO:GO:0022624 eggNOG:COG5116 GeneTree:ENSGT00550000074915
HOGENOM:HOG000189403 KO:K03032 OMA:CVENAEL Pfam:PF01851 CTD:5707
HOVERGEN:HBG007543 OrthoDB:EOG4X97GG EMBL:AK153386 EMBL:AK159123
EMBL:BC138526 EMBL:BC138527 IPI:IPI00267295 RefSeq:NP_081633.1
UniGene:Mm.280013 ProteinModelPortal:Q3TXS7 SMR:Q3TXS7
IntAct:Q3TXS7 STRING:Q3TXS7 PhosphoSite:Q3TXS7 PaxDb:Q3TXS7
PRIDE:Q3TXS7 Ensembl:ENSMUST00000027432 GeneID:70247 KEGG:mmu:70247
UCSC:uc007buy.1 InParanoid:B2RRP8 NextBio:331246 Bgee:Q3TXS7
Genevestigator:Q3TXS7 Uniprot:Q3TXS7
Length = 953
Score = 994 (355.0 bits), Expect = 9.1e-109, Sum P(2) = 9.1e-109
Identities = 196/320 (61%), Positives = 241/320 (75%)
Query: 526 DPMIELKEFSLKKLNDIVDDFWPENEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSNK 585
DPM E +E + + D PE K++ L K+ KILSGE++I+LHLQFLIR+N
Sbjct: 295 DPM-ETEEKTASAVAGKTPDASPE-PKDQTL-----KMIKILSGEMAIELHLQFLIRNNN 347
Query: 586 TDMLILKNTKESIRVSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATAS 645
TD++ILKNTK+++R S+CHTAT+IAN+FMH GTTSDQFLRDNLEWLARATNWAK TATAS
Sbjct: 348 TDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATAS 407
Query: 646 LGVIHRGHETEALAHMQSYLPRETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQVKD 705
LGVIH+GHE EAL M +YLP++T P S IHANHG I DYLL Q+K+
Sbjct: 408 LGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKN 467
Query: 706 ATNEMVRHXXXXXXXXXXXXXXRDDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSES 765
A+N++VRH R D+Y+ LK NLYQDDAVTGEAAG+A+GLV+LGSK+
Sbjct: 468 ASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQ 527
Query: 766 AIQDMVAYAKETQHEKILRGLAVGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIA 825
AI+DMV YA+ETQHEKILRGLAVGI+ +MYG++E AD L+ LC +KD ILRRSGMYT+A
Sbjct: 528 AIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVA 587
Query: 826 MAYCGSGSNVATKRLLHDAI 845
MAYCGSG+N A +RLLH A+
Sbjct: 588 MAYCGSGNNKAIRRLLHVAV 607
Score = 938 (335.3 bits), Expect = 3.0e-94, P = 3.0e-94
Identities = 226/493 (45%), Positives = 300/493 (60%)
Query: 43 LAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSAD 102
L MS +Q++ FR ++LR LV++Y +L PD++N+ QC I+LDDP++V+++L KLV D
Sbjct: 183 LCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLV--KED 240
Query: 103 DDLMAAQIGFDLYESATQAFLASVLQELKTCAPIPDATHVVVKVPVXXXXXXXXXXXXXX 162
+ LMA QI FDLYESA+Q FL+SV+Q L+T P + VP
Sbjct: 241 NLLMAYQICFDLYESASQQFLSSVIQNLRTVGT-P-----IASVP-GSTNTGTVPGSEKD 293
Query: 163 XXXXXXXSGPSSTTPGPETKTLESLNEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSN 222
+S G KT ++ E + Q K+ KILSGE++I+LHLQFLIR+N
Sbjct: 294 SDPMETEEKTASAVAG---KTPDASPEPKDQT----LKMIKILSGEMAIELHLQFLIRNN 346
Query: 223 KTDMLILKNTKESIRVSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATA 282
TD++ILKNTK+++R S+CHTAT+IAN+FMH GTTSDQFLRDNLEWLARATNWAK TATA
Sbjct: 347 NTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATA 406
Query: 283 SLGVIHRGHETEALAHMQSYLPRETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQVK 342
SLGVIH+GHE EAL M +YLP++T P S IHANHG I DYLL Q+K
Sbjct: 407 SLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLK 466
Query: 343 DATNEDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEK-ILRGLAVGISF--I 399
+A+N+ + + +GL +G+ A QD+ K ++ + G A G++ +
Sbjct: 467 NASND---IVRHGGSLGLGLAAMGT----ARQDVYDLLKTNLYQDDAVTGEAAGLALGLV 519
Query: 400 MYGQLENA---DDLVRDLCEEKDAILRRSGMYTIAMAYCVSYLYFDLFSDLTYRI---VK 453
M G +NA +D+V E + + R IA+ D + R +
Sbjct: 520 MLGS-KNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPIL 578
Query: 454 NRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFRTLFYVAPACT 513
RSGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV +LGFILFRT C
Sbjct: 579 RRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRT----PEQC- 633
Query: 514 RSPWPGVISLLDD 526
P V+SLL +
Sbjct: 634 ----PSVVSLLSE 642
Score = 243 (90.6 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 72/177 (40%), Positives = 98/177 (55%)
Query: 729 DDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEK-ILRGLA 787
D + QLK N D + + +GL +G+ A QD+ K ++ + G A
Sbjct: 459 DYLLNQLK-NASND--IVRHGGSLGLGLAAMGT----ARQDVYDLLKTNLYQDDAVTGEA 511
Query: 788 VGISF--IMYGQLENA---DDLVRDLCEEKDAILRRSGMYTIAMAYCG--SGSNVATKRL 840
G++ +M G +NA +D+V E + + R IA+ G ++ + L
Sbjct: 512 AGLALGLVMLGS-KNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESL 570
Query: 841 LHDA--ILRRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILF 895
D ILRRSGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV +LGFILF
Sbjct: 571 CRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILF 627
Score = 101 (40.6 bits), Expect = 9.1e-109, Sum P(2) = 9.1e-109
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 519 GVISLLDDPMIELKEFSLKKLNDIVDDFWPE 549
G+ISLLD+ +LKEF+L KLN +V+DFW E
Sbjct: 7 GIISLLDEEEPQLKEFALHKLNAVVNDFWAE 37
>ZFIN|ZDB-GENE-040426-810 [details] [associations]
symbol:psmd1 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 1" species:7955 "Danio rerio" [GO:0000502
"proteasome complex" evidence=IEA] [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
ZFIN:ZDB-GENE-040426-810 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 GeneTree:ENSGT00550000074915 Pfam:PF01851
EMBL:BX571973 EMBL:CABZ01044354 IPI:IPI00506005
Ensembl:ENSDART00000144100 ArrayExpress:F1QY43 Uniprot:F1QY43
Length = 959
Score = 992 (354.3 bits), Expect = 9.1e-109, Sum P(2) = 9.1e-109
Identities = 196/337 (58%), Positives = 247/337 (73%)
Query: 561 TKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSICHTATIIANAFMHSGTTS 620
+K+ KILSGE++I+LHLQFLIR+N TD++ILKNTK+++R S+CHTAT+IAN+FMH+GTTS
Sbjct: 319 SKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAVRNSVCHTATVIANSFMHTGTTS 378
Query: 621 DQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRETGPTSXXXXXXX 680
DQFLR+NLEWLARATNWAK TATASLGVIH+GHE EAL M +YLP++T P S
Sbjct: 379 DQFLRENLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGG 438
Query: 681 XXXXXXIHANHGAVINDYLLGQVKDATNEMVRHXXXXXXXXXXXXXXRDDIYEQLKFNLY 740
IHANHG I DYLL Q+K+A+N++VRH R D+Y+ LK NLY
Sbjct: 439 LYALGLIHANHGGDIIDYLLSQLKNASNDIVRHGGALGLGLAALGTARQDVYDLLKSNLY 498
Query: 741 QDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQLEN 800
QDDAVTGEAAG+A+GLV+LGSKS AI+DMV YA+ETQHEKILRGLAVGI+ +MYG++E
Sbjct: 499 QDDAVTGEAAGLALGLVMLGSKSAQAIEDMVGYAQETQHEKILRGLAVGIAMVMYGRMEE 558
Query: 801 ADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAI------LRRSGMYTI 854
AD L+ LC +KD ILRRSGMYT+AMAYCGSG+N A +RLLH A+ +RR+ + +I
Sbjct: 559 ADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESI 618
Query: 855 AMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALG 891
+ + ++ + N VR A ALG
Sbjct: 619 GFIMFRTPEQCPS--VVSLLSESYNPHVRYGAAMALG 653
Score = 955 (341.2 bits), Expect = 4.7e-96, P = 4.7e-96
Identities = 223/491 (45%), Positives = 302/491 (61%)
Query: 43 LAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSAD 102
+ MS +Q++ FR ++LR LV+LY +L PD++N+ QC I+LDDP++V+++L KLV D
Sbjct: 179 ICMSLMQNKKFRNEVLRVLVKLYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLV--KED 236
Query: 103 DDLMAAQIGFDLYESATQAFLASVLQELKTCA-PIPDATHVVVKVPVXXXXXXXXXXXXX 161
+ LMA QI FDLYESA+Q FL+SV+Q L+T PIP VP
Sbjct: 237 NLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIP-------AVPGSTNTGTVPTPDKD 289
Query: 162 XXXXXXXXSGPSSTTPGPETKTLESLNEKEKQLQARITKLSKILSGEVSIDLHLQFLIRS 221
SS P KT ++ +E + Q +K+ KILSGE++I+LHLQFLIR+
Sbjct: 290 SDSMETEDKAGSS----PAGKTADAKDEPKDQN----SKMIKILSGEMAIELHLQFLIRN 341
Query: 222 NKTDMLILKNTKESIRVSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTAT 281
N TD++ILKNTK+++R S+CHTAT+IAN+FMH+GTTSDQFLR+NLEWLARATNWAK TAT
Sbjct: 342 NNTDLMILKNTKDAVRNSVCHTATVIANSFMHTGTTSDQFLRENLEWLARATNWAKFTAT 401
Query: 282 ASLGVIHRGHETEALAHMQSYLPRETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQV 341
ASLGVIH+GHE EAL M +YLP++T P S IHANHG I DYLL Q+
Sbjct: 402 ASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLSQL 461
Query: 342 KDATNEDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKIL---RGLAVGISF 398
K+A+N+ + + +GL LG+ + + D++ + Q + + GLA+G+
Sbjct: 462 KNASND---IVRHGGALGLGLAALGTARQD-VYDLLK-SNLYQDDAVTGEAAGLALGLVM 516
Query: 399 IMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCVSYLYFDLFSDLTYRI---VKNR 455
+ + +D+V E + + R IAM D + R + R
Sbjct: 517 LGSKSAQAIEDMVGYAQETQHEKILRGLAVGIAMVMYGRMEEADALIESLCRDKDPILRR 576
Query: 456 SGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFRTLFYVAPACTRS 515
SGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV ++GFI+FRT C
Sbjct: 577 SGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESIGFIMFRT----PEQC--- 629
Query: 516 PWPGVISLLDD 526
P V+SLL +
Sbjct: 630 --PSVVSLLSE 638
Score = 246 (91.7 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 70/174 (40%), Positives = 97/174 (55%)
Query: 729 DDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKIL---RG 785
D + QLK N D G A G+ GL LG+ + + D++ + Q + + G
Sbjct: 455 DYLLSQLK-NASNDIVRHGGALGL--GLAALGTARQD-VYDLLK-SNLYQDDAVTGEAAG 509
Query: 786 LAVGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCG--SGSNVATKRLLHD 843
LA+G+ + + +D+V E + + R IAM G ++ + L D
Sbjct: 510 LALGLVMLGSKSAQAIEDMVGYAQETQHEKILRGLAVGIAMVMYGRMEEADALIESLCRD 569
Query: 844 A--ILRRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILF 895
ILRRSGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV ++GFI+F
Sbjct: 570 KDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESIGFIMF 623
Score = 103 (41.3 bits), Expect = 9.1e-109, Sum P(2) = 9.1e-109
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 519 GVISLLDDPMIELKEFSLKKLNDIVDDFWPE 549
G+ISLLD+ +LKEF+L KLN +V+DFW E
Sbjct: 2 GIISLLDEDEPQLKEFALHKLNSVVNDFWAE 32
>UNIPROTKB|Q99460 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9606 "Homo sapiens" [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0005838 "proteasome regulatory particle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 INTERPRO:IPR002015 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0030234 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
SUPFAM:SSF48371 Reactome:REACT_21300 GO:GO:0006977
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042981 GO:GO:0044281
GO:GO:0000082 EMBL:AC009407 GO:GO:0051436 GO:GO:0000216
GO:GO:0042176 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 Reactome:REACT_383 DrugBank:DB00188
GO:GO:0005838 eggNOG:COG5116 KO:K03032 OMA:CVENAEL Pfam:PF01851
CTD:5707 HOVERGEN:HBG007543 EMBL:D44466 EMBL:BC001053 EMBL:BC014013
EMBL:BC039845 EMBL:BC047897 EMBL:BC064398 EMBL:BC073833
EMBL:BC094720 EMBL:BC112344 EMBL:BC114434 IPI:IPI00299608
IPI:IPI00456695 RefSeq:NP_001177966.1 RefSeq:NP_002798.2
UniGene:Hs.3887 ProteinModelPortal:Q99460 SMR:Q99460 DIP:DIP-27548N
IntAct:Q99460 MINT:MINT-1160606 STRING:Q99460 PhosphoSite:Q99460
DMDM:51704332 PaxDb:Q99460 PRIDE:Q99460 Ensembl:ENST00000308696
Ensembl:ENST00000373635 Ensembl:ENST00000409643 GeneID:5707
KEGG:hsa:5707 UCSC:uc002vrm.2 UCSC:uc002vrn.2 GeneCards:GC02P231921
HGNC:HGNC:9554 HPA:CAB021092 neXtProt:NX_Q99460 PharmGKB:PA33899
InParanoid:Q99460 OrthoDB:EOG4X97GG PhylomeDB:Q99460
ChEMBL:CHEMBL1934 ChiTaRS:PSMD1 GenomeRNAi:5707 NextBio:22174
ArrayExpress:Q99460 Bgee:Q99460 CleanEx:HS_PSMD1
Genevestigator:Q99460 GermOnline:ENSG00000173692 Uniprot:Q99460
Length = 953
Score = 991 (353.9 bits), Expect = 1.9e-108, Sum P(2) = 1.9e-108
Identities = 190/298 (63%), Positives = 231/298 (77%)
Query: 548 PENEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSICHTAT 607
PE E + Q K+ KILSGE++I+LHLQFLIR+N TD++ILKNTK+++R S+CHTAT
Sbjct: 312 PEASPEPKDQT--LKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAVRNSVCHTAT 369
Query: 608 IIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPR 667
+IAN+FMH GTTSDQFLRDNLEWLARATNWAK TATASLGVIH+GHE EAL M +YLP+
Sbjct: 370 VIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPK 429
Query: 668 ETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQVKDATNEMVRHXXXXXXXXXXXXXX 727
+T P S IHANHG I DYLL Q+K+A+N++VRH
Sbjct: 430 DTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTA 489
Query: 728 RDDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLA 787
R D+Y+ LK NLYQDDAVTGEAAG+A+GLV+LGSK+ AI+DMV YA+ETQHEKILRGLA
Sbjct: 490 RQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLA 549
Query: 788 VGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAI 845
VGI+ +MYG++E AD L+ LC +KD ILRRSGMYT+AMAYCGSG+N A +RLLH A+
Sbjct: 550 VGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAV 607
Score = 943 (337.0 bits), Expect = 8.7e-95, P = 8.7e-95
Identities = 228/493 (46%), Positives = 300/493 (60%)
Query: 43 LAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSAD 102
L MS +Q++ FR ++LR LV++Y +L PD++N+ QC I+LDDP++V+++L KLV D
Sbjct: 183 LCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLV--KED 240
Query: 103 DDLMAAQIGFDLYESATQAFLASVLQELKTCAPIPDATHVVVKVPVXXXXXXXXXXXXXX 162
+ LMA QI FDLYESA+Q FL+SV+Q L+T P + VP
Sbjct: 241 NLLMAYQICFDLYESASQQFLSSVIQNLRTVGT-P-----IASVP-GSTNTGTVPGSEKD 293
Query: 163 XXXXXXXSGPSSTTPGPETKTLESLNEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSN 222
SS G KT E+ E + Q K+ KILSGE++I+LHLQFLIR+N
Sbjct: 294 SDSMETEEKTSSAFVG---KTPEASPEPKDQT----LKMIKILSGEMAIELHLQFLIRNN 346
Query: 223 KTDMLILKNTKESIRVSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATA 282
TD++ILKNTK+++R S+CHTAT+IAN+FMH GTTSDQFLRDNLEWLARATNWAK TATA
Sbjct: 347 NTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATA 406
Query: 283 SLGVIHRGHETEALAHMQSYLPRETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQVK 342
SLGVIH+GHE EAL M +YLP++T P S IHANHG I DYLL Q+K
Sbjct: 407 SLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLK 466
Query: 343 DATNEDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEK-ILRGLAVGISF--I 399
+A+N+ + + +GL +G+ A QD+ K ++ + G A G++ +
Sbjct: 467 NASND---IVRHGGSLGLGLAAMGT----ARQDVYDLLKTNLYQDDAVTGEAAGLALGLV 519
Query: 400 MYGQLENA---DDLVRDLCEEKDAILRRSGMYTIAMAYCVSYLYFDLFSDLTYRI---VK 453
M G +NA +D+V E + + R IA+ D + R +
Sbjct: 520 MLGS-KNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPIL 578
Query: 454 NRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFRTLFYVAPACT 513
RSGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV +LGFILFRT C
Sbjct: 579 RRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRT----PEQC- 633
Query: 514 RSPWPGVISLLDD 526
P V+SLL +
Sbjct: 634 ----PSVVSLLSE 642
Score = 243 (90.6 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 72/177 (40%), Positives = 98/177 (55%)
Query: 729 DDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEK-ILRGLA 787
D + QLK N D + + +GL +G+ A QD+ K ++ + G A
Sbjct: 459 DYLLNQLK-NASND--IVRHGGSLGLGLAAMGT----ARQDVYDLLKTNLYQDDAVTGEA 511
Query: 788 VGISF--IMYGQLENA---DDLVRDLCEEKDAILRRSGMYTIAMAYCG--SGSNVATKRL 840
G++ +M G +NA +D+V E + + R IA+ G ++ + L
Sbjct: 512 AGLALGLVMLGS-KNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESL 570
Query: 841 LHDA--ILRRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILF 895
D ILRRSGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV +LGFILF
Sbjct: 571 CRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILF 627
Score = 101 (40.6 bits), Expect = 1.9e-108, Sum P(2) = 1.9e-108
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 519 GVISLLDDPMIELKEFSLKKLNDIVDDFWPE 549
G+ISLLD+ +LKEF+L KLN +V+DFW E
Sbjct: 7 GIISLLDEDEPQLKEFALHKLNAVVNDFWAE 37
>UNIPROTKB|Q5R5S4 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9601 "Pongo abelii" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0042176
GO:GO:0022624 GeneTree:ENSGT00550000074915 KO:K03032 OMA:CVENAEL
Pfam:PF01851 CTD:5707 HOVERGEN:HBG007543 OrthoDB:EOG4X97GG
EMBL:CR860782 RefSeq:NP_001126695.1 UniGene:Pab.18654
ProteinModelPortal:Q5R5S4 PRIDE:Q5R5S4 Ensembl:ENSPPYT00000015422
GeneID:100173695 KEGG:pon:100173695 InParanoid:Q5R5S4
Uniprot:Q5R5S4
Length = 953
Score = 991 (353.9 bits), Expect = 1.9e-108, Sum P(2) = 1.9e-108
Identities = 190/298 (63%), Positives = 231/298 (77%)
Query: 548 PENEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSICHTAT 607
PE E + Q K+ KILSGE++I+LHLQFLIR+N TD++ILKNTK+++R S+CHTAT
Sbjct: 312 PEASPEPKDQT--LKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAVRNSVCHTAT 369
Query: 608 IIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPR 667
+IAN+FMH GTTSDQFLRDNLEWLARATNWAK TATASLGVIH+GHE EAL M +YLP+
Sbjct: 370 VIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPK 429
Query: 668 ETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQVKDATNEMVRHXXXXXXXXXXXXXX 727
+T P S IHANHG I DYLL Q+K+A+N++VRH
Sbjct: 430 DTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTA 489
Query: 728 RDDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLA 787
R D+Y+ LK NLYQDDAVTGEAAG+A+GLV+LGSK+ AI+DMV YA+ETQHEKILRGLA
Sbjct: 490 RQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLA 549
Query: 788 VGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAI 845
VGI+ +MYG++E AD L+ LC +KD ILRRSGMYT+AMAYCGSG+N A +RLLH A+
Sbjct: 550 VGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAV 607
Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
Identities = 227/493 (46%), Positives = 299/493 (60%)
Query: 43 LAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSAD 102
L MS +Q++ FR ++LR LV++Y +L PD++N+ QC I+LDDP++V+++L KLV D
Sbjct: 183 LCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLV--KED 240
Query: 103 DDLMAAQIGFDLYESATQAFLASVLQELKTCAPIPDATHVVVKVPVXXXXXXXXXXXXXX 162
+ LMA QI FDLYESA+Q FL+SV+Q L+T P + VP
Sbjct: 241 NLLMAYQICFDLYESASQQFLSSVIQNLRTVGT-P-----IASVP-GSTNTGTVPGSEKD 293
Query: 163 XXXXXXXSGPSSTTPGPETKTLESLNEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSN 222
S G KT E+ E + Q K+ KILSGE++I+LHLQFLIR+N
Sbjct: 294 SDSMETEEKTGSAFVG---KTPEASPEPKDQT----LKMIKILSGEMAIELHLQFLIRNN 346
Query: 223 KTDMLILKNTKESIRVSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATA 282
TD++ILKNTK+++R S+CHTAT+IAN+FMH GTTSDQFLRDNLEWLARATNWAK TATA
Sbjct: 347 NTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATA 406
Query: 283 SLGVIHRGHETEALAHMQSYLPRETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQVK 342
SLGVIH+GHE EAL M +YLP++T P S IHANHG I DYLL Q+K
Sbjct: 407 SLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLK 466
Query: 343 DATNEDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEK-ILRGLAVGISF--I 399
+A+N+ + + +GL +G+ A QD+ K ++ + G A G++ +
Sbjct: 467 NASND---IVRHGGSLGLGLAAMGT----ARQDVYDLLKTNLYQDDAVTGEAAGLALGLV 519
Query: 400 MYGQLENA---DDLVRDLCEEKDAILRRSGMYTIAMAYCVSYLYFDLFSDLTYRI---VK 453
M G +NA +D+V E + + R IA+ D + R +
Sbjct: 520 MLGS-KNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPIL 578
Query: 454 NRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFRTLFYVAPACT 513
RSGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV +LGFILFRT C
Sbjct: 579 RRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRT----PEQC- 633
Query: 514 RSPWPGVISLLDD 526
P V+SLL +
Sbjct: 634 ----PSVVSLLSE 642
Score = 243 (90.6 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 72/177 (40%), Positives = 98/177 (55%)
Query: 729 DDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEK-ILRGLA 787
D + QLK N D + + +GL +G+ A QD+ K ++ + G A
Sbjct: 459 DYLLNQLK-NASND--IVRHGGSLGLGLAAMGT----ARQDVYDLLKTNLYQDDAVTGEA 511
Query: 788 VGISF--IMYGQLENA---DDLVRDLCEEKDAILRRSGMYTIAMAYCG--SGSNVATKRL 840
G++ +M G +NA +D+V E + + R IA+ G ++ + L
Sbjct: 512 AGLALGLVMLGS-KNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESL 570
Query: 841 LHDA--ILRRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILF 895
D ILRRSGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV +LGFILF
Sbjct: 571 CRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILF 627
Score = 101 (40.6 bits), Expect = 1.9e-108, Sum P(2) = 1.9e-108
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 519 GVISLLDDPMIELKEFSLKKLNDIVDDFWPE 549
G+ISLLD+ +LKEF+L KLN +V+DFW E
Sbjct: 7 GIISLLDEDEPQLKEFALHKLNAVVNDFWAE 37
>UNIPROTKB|F1PX57 [details] [associations]
symbol:PSMD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042176 "regulation of protein catabolic
process" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 OMA:CVENAEL Pfam:PF01851
EMBL:AAEX03014431 Ensembl:ENSCAFT00000017372 Uniprot:F1PX57
Length = 953
Score = 990 (353.6 bits), Expect = 2.4e-108, Sum P(2) = 2.4e-108
Identities = 190/298 (63%), Positives = 231/298 (77%)
Query: 548 PENEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSICHTAT 607
PE E + Q K+ KILSGE++I+LHLQFLIR+N TD++ILKNTK+++R S+CHTAT
Sbjct: 312 PEVSPEPKDQT--LKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAVRNSVCHTAT 369
Query: 608 IIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPR 667
+IAN+FMH GTTSDQFLRDNLEWLARATNWAK TATASLGVIH+GHE EAL M +YLP+
Sbjct: 370 VIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPK 429
Query: 668 ETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQVKDATNEMVRHXXXXXXXXXXXXXX 727
+T P S IHANHG I DYLL Q+K+A+N++VRH
Sbjct: 430 DTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTA 489
Query: 728 RDDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLA 787
R D+Y+ LK NLYQDDAVTGEAAG+A+GLV+LGSK+ AI+DMV YA+ETQHEKILRGLA
Sbjct: 490 RQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLA 549
Query: 788 VGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAI 845
VGI+ +MYG++E AD L+ LC +KD ILRRSGMYT+AMAYCGSG+N A +RLLH A+
Sbjct: 550 VGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAV 607
Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
Identities = 227/493 (46%), Positives = 298/493 (60%)
Query: 43 LAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSAD 102
L MS +Q++ FR ++LR LV++Y +L PD++N+ QC I+LDDP++V+++L KLV D
Sbjct: 183 LCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLV--KED 240
Query: 103 DDLMAAQIGFDLYESATQAFLASVLQELKTCAPIPDATHVVVKVPVXXXXXXXXXXXXXX 162
+ LMA QI FDLYESA+Q FL+SV+Q L+T P + VP
Sbjct: 241 NLLMAYQICFDLYESASQQFLSSVIQNLRTVGT-P-----IASVP-GSTNTGTVPGSEKD 293
Query: 163 XXXXXXXSGPSSTTPGPETKTLESLNEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSN 222
S G KT E E + Q K+ KILSGE++I+LHLQFLIR+N
Sbjct: 294 SESMETEEKTGSVLVG---KTPEVSPEPKDQT----LKMIKILSGEMAIELHLQFLIRNN 346
Query: 223 KTDMLILKNTKESIRVSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATA 282
TD++ILKNTK+++R S+CHTAT+IAN+FMH GTTSDQFLRDNLEWLARATNWAK TATA
Sbjct: 347 NTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATA 406
Query: 283 SLGVIHRGHETEALAHMQSYLPRETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQVK 342
SLGVIH+GHE EAL M +YLP++T P S IHANHG I DYLL Q+K
Sbjct: 407 SLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLK 466
Query: 343 DATNEDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEK-ILRGLAVGISF--I 399
+A+N+ + + +GL +G+ A QD+ K ++ + G A G++ +
Sbjct: 467 NASND---IVRHGGSLGLGLAAMGT----ARQDVYDLLKTNLYQDDAVTGEAAGLALGLV 519
Query: 400 MYGQLENA---DDLVRDLCEEKDAILRRSGMYTIAMAYCVSYLYFDLFSDLTYRI---VK 453
M G +NA +D+V E + + R IA+ D + R +
Sbjct: 520 MLGS-KNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPIL 578
Query: 454 NRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFRTLFYVAPACT 513
RSGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV +LGFILFRT C
Sbjct: 579 RRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRT----PEQC- 633
Query: 514 RSPWPGVISLLDD 526
P V+SLL +
Sbjct: 634 ----PSVVSLLSE 642
Score = 243 (90.6 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 72/177 (40%), Positives = 98/177 (55%)
Query: 729 DDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEK-ILRGLA 787
D + QLK N D + + +GL +G+ A QD+ K ++ + G A
Sbjct: 459 DYLLNQLK-NASND--IVRHGGSLGLGLAAMGT----ARQDVYDLLKTNLYQDDAVTGEA 511
Query: 788 VGISF--IMYGQLENA---DDLVRDLCEEKDAILRRSGMYTIAMAYCG--SGSNVATKRL 840
G++ +M G +NA +D+V E + + R IA+ G ++ + L
Sbjct: 512 AGLALGLVMLGS-KNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESL 570
Query: 841 LHDA--ILRRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILF 895
D ILRRSGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV +LGFILF
Sbjct: 571 CRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILF 627
Score = 101 (40.6 bits), Expect = 2.4e-108, Sum P(2) = 2.4e-108
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 519 GVISLLDDPMIELKEFSLKKLNDIVDDFWPE 549
G+ISLLD+ +LKEF+L KLN +V+DFW E
Sbjct: 7 GIISLLDEEEPQLKEFALHKLNAVVNDFWAE 37
>UNIPROTKB|J9P4R4 [details] [associations]
symbol:PSMD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042176 "regulation of protein catabolic
process" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 Pfam:PF01851 EMBL:AAEX03014431
Ensembl:ENSCAFT00000044920 Uniprot:J9P4R4
Length = 701
Score = 990 (353.6 bits), Expect = 2.4e-108, Sum P(2) = 2.4e-108
Identities = 190/298 (63%), Positives = 231/298 (77%)
Query: 548 PENEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSICHTAT 607
PE E + Q K+ KILSGE++I+LHLQFLIR+N TD++ILKNTK+++R S+CHTAT
Sbjct: 312 PEVSPEPKDQT--LKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAVRNSVCHTAT 369
Query: 608 IIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPR 667
+IAN+FMH GTTSDQFLRDNLEWLARATNWAK TATASLGVIH+GHE EAL M +YLP+
Sbjct: 370 VIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPK 429
Query: 668 ETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQVKDATNEMVRHXXXXXXXXXXXXXX 727
+T P S IHANHG I DYLL Q+K+A+N++VRH
Sbjct: 430 DTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTA 489
Query: 728 RDDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLA 787
R D+Y+ LK NLYQDDAVTGEAAG+A+GLV+LGSK+ AI+DMV YA+ETQHEKILRGLA
Sbjct: 490 RQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLA 549
Query: 788 VGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAI 845
VGI+ +MYG++E AD L+ LC +KD ILRRSGMYT+AMAYCGSG+N A +RLLH A+
Sbjct: 550 VGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAV 607
Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
Identities = 227/493 (46%), Positives = 298/493 (60%)
Query: 43 LAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSAD 102
L MS +Q++ FR ++LR LV++Y +L PD++N+ QC I+LDDP++V+++L KLV D
Sbjct: 183 LCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLV--KED 240
Query: 103 DDLMAAQIGFDLYESATQAFLASVLQELKTCAPIPDATHVVVKVPVXXXXXXXXXXXXXX 162
+ LMA QI FDLYESA+Q FL+SV+Q L+T P + VP
Sbjct: 241 NLLMAYQICFDLYESASQQFLSSVIQNLRTVGT-P-----IASVP-GSTNTGTVPGSEKD 293
Query: 163 XXXXXXXSGPSSTTPGPETKTLESLNEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSN 222
S G KT E E + Q K+ KILSGE++I+LHLQFLIR+N
Sbjct: 294 SESMETEEKTGSVLVG---KTPEVSPEPKDQT----LKMIKILSGEMAIELHLQFLIRNN 346
Query: 223 KTDMLILKNTKESIRVSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATA 282
TD++ILKNTK+++R S+CHTAT+IAN+FMH GTTSDQFLRDNLEWLARATNWAK TATA
Sbjct: 347 NTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATA 406
Query: 283 SLGVIHRGHETEALAHMQSYLPRETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQVK 342
SLGVIH+GHE EAL M +YLP++T P S IHANHG I DYLL Q+K
Sbjct: 407 SLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLK 466
Query: 343 DATNEDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEK-ILRGLAVGISF--I 399
+A+N+ + + +GL +G+ A QD+ K ++ + G A G++ +
Sbjct: 467 NASND---IVRHGGSLGLGLAAMGT----ARQDVYDLLKTNLYQDDAVTGEAAGLALGLV 519
Query: 400 MYGQLENA---DDLVRDLCEEKDAILRRSGMYTIAMAYCVSYLYFDLFSDLTYRI---VK 453
M G +NA +D+V E + + R IA+ D + R +
Sbjct: 520 MLGS-KNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPIL 578
Query: 454 NRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFRTLFYVAPACT 513
RSGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV +LGFILFRT C
Sbjct: 579 RRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRT----PEQC- 633
Query: 514 RSPWPGVISLLDD 526
P V+SLL +
Sbjct: 634 ----PSVVSLLSE 642
Score = 243 (90.6 bits), Expect = 2.8e-22, Sum P(2) = 2.8e-22
Identities = 72/177 (40%), Positives = 98/177 (55%)
Query: 729 DDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEK-ILRGLA 787
D + QLK N D + + +GL +G+ A QD+ K ++ + G A
Sbjct: 459 DYLLNQLK-NASND--IVRHGGSLGLGLAAMGT----ARQDVYDLLKTNLYQDDAVTGEA 511
Query: 788 VGISF--IMYGQLENA---DDLVRDLCEEKDAILRRSGMYTIAMAYCG--SGSNVATKRL 840
G++ +M G +NA +D+V E + + R IA+ G ++ + L
Sbjct: 512 AGLALGLVMLGS-KNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESL 570
Query: 841 LHDA--ILRRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILF 895
D ILRRSGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV +LGFILF
Sbjct: 571 CRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILF 627
Score = 101 (40.6 bits), Expect = 2.4e-108, Sum P(2) = 2.4e-108
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 519 GVISLLDDPMIELKEFSLKKLNDIVDDFWPE 549
G+ISLLD+ +LKEF+L KLN +V+DFW E
Sbjct: 7 GIISLLDEEEPQLKEFALHKLNAVVNDFWAE 37
>UNIPROTKB|A7MBA2 [details] [associations]
symbol:PSMD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 eggNOG:COG5116
GeneTree:ENSGT00550000074915 HOGENOM:HOG000189403 KO:K03032
OMA:CVENAEL Pfam:PF01851 CTD:5707 HOVERGEN:HBG007543
OrthoDB:EOG4X97GG EMBL:DAAA02006191 EMBL:BC151445 IPI:IPI00714855
RefSeq:NP_001094547.1 UniGene:Bt.27989 STRING:A7MBA2
Ensembl:ENSBTAT00000006754 GeneID:511803 KEGG:bta:511803
InParanoid:A7MBA2 NextBio:20870109 Uniprot:A7MBA2
Length = 953
Score = 990 (353.6 bits), Expect = 2.4e-108, Sum P(2) = 2.4e-108
Identities = 190/298 (63%), Positives = 231/298 (77%)
Query: 548 PENEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSICHTAT 607
PE E + Q K+ KILSGE++I+LHLQFLIR+N TD++ILKNTK+++R S+CHTAT
Sbjct: 312 PEVSPEPKDQT--LKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAVRNSVCHTAT 369
Query: 608 IIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPR 667
+IAN+FMH GTTSDQFLRDNLEWLARATNWAK TATASLGVIH+GHE EAL M +YLP+
Sbjct: 370 VIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPK 429
Query: 668 ETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQVKDATNEMVRHXXXXXXXXXXXXXX 727
+T P S IHANHG I DYLL Q+K+A+N++VRH
Sbjct: 430 DTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTA 489
Query: 728 RDDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLA 787
R D+Y+ LK NLYQDDAVTGEAAG+A+GLV+LGSK+ AI+DMV YA+ETQHEKILRGLA
Sbjct: 490 RQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLA 549
Query: 788 VGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAI 845
VGI+ +MYG++E AD L+ LC +KD ILRRSGMYT+AMAYCGSG+N A +RLLH A+
Sbjct: 550 VGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAV 607
Score = 935 (334.2 bits), Expect = 6.1e-94, P = 6.1e-94
Identities = 228/493 (46%), Positives = 299/493 (60%)
Query: 43 LAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSAD 102
L MS +Q++ FR ++LR LV++Y +L PD++N+ QC I+LDDP++V+++L KLV D
Sbjct: 183 LCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLV--KED 240
Query: 103 DDLMAAQIGFDLYESATQAFLASVLQELKTCAPIPDATHVVVKVPVXXXXXXXXXXXXXX 162
+ LMA QI FDLYESA+Q FL+SV+Q L+T P A+ VP
Sbjct: 241 NLLMAYQICFDLYESASQQFLSSVIQNLRTVGT-PLAS-----VP-GSTNTGTVPGSERE 293
Query: 163 XXXXXXXSGPSSTTPGPETKTLESLNEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSN 222
S G KT E E + Q K+ KILSGE++I+LHLQFLIR+N
Sbjct: 294 SDSMETEEKTGSVLVG---KTPEVSPEPKDQT----LKMIKILSGEMAIELHLQFLIRNN 346
Query: 223 KTDMLILKNTKESIRVSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATA 282
TD++ILKNTK+++R S+CHTAT+IAN+FMH GTTSDQFLRDNLEWLARATNWAK TATA
Sbjct: 347 NTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATA 406
Query: 283 SLGVIHRGHETEALAHMQSYLPRETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQVK 342
SLGVIH+GHE EAL M +YLP++T P S IHANHG I DYLL Q+K
Sbjct: 407 SLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLK 466
Query: 343 DATNEDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEK-ILRGLAVGISF--I 399
+A+N+ + + +GL +G+ A QD+ K ++ + G A G++ +
Sbjct: 467 NASND---IVRHGGSLGLGLAAMGT----ARQDVYDLLKTNLYQDDAVTGEAAGLALGLV 519
Query: 400 MYGQLENA---DDLVRDLCEEKDAILRRSGMYTIAMAYCVSYLYFDLFSDLTYRI---VK 453
M G +NA +D+V E + + R IA+ D + R +
Sbjct: 520 MLGS-KNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPIL 578
Query: 454 NRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFRTLFYVAPACT 513
RSGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV +LGFILFRT C
Sbjct: 579 RRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRT----PEQC- 633
Query: 514 RSPWPGVISLLDD 526
P V+SLL +
Sbjct: 634 ----PSVVSLLSE 642
Score = 243 (90.6 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 72/177 (40%), Positives = 98/177 (55%)
Query: 729 DDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEK-ILRGLA 787
D + QLK N D + + +GL +G+ A QD+ K ++ + G A
Sbjct: 459 DYLLNQLK-NASND--IVRHGGSLGLGLAAMGT----ARQDVYDLLKTNLYQDDAVTGEA 511
Query: 788 VGISF--IMYGQLENA---DDLVRDLCEEKDAILRRSGMYTIAMAYCG--SGSNVATKRL 840
G++ +M G +NA +D+V E + + R IA+ G ++ + L
Sbjct: 512 AGLALGLVMLGS-KNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESL 570
Query: 841 LHDA--ILRRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILF 895
D ILRRSGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV +LGFILF
Sbjct: 571 CRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILF 627
Score = 101 (40.6 bits), Expect = 2.4e-108, Sum P(2) = 2.4e-108
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 519 GVISLLDDPMIELKEFSLKKLNDIVDDFWPE 549
G+ISLLD+ +LKEF+L KLN +V+DFW E
Sbjct: 7 GIISLLDEEEPQLKEFALHKLNAVVNDFWAE 37
>UNIPROTKB|F1LRN6 [details] [associations]
symbol:Psmd1 "26S proteasome non-ATPase regulatory subunit
1" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 RGD:621669 INTERPRO:IPR002015 GO:GO:0030234
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 Pfam:PF01851 IPI:IPI00949424
PRIDE:F1LRN6 Ensembl:ENSRNOT00000066613 ArrayExpress:F1LRN6
Uniprot:F1LRN6
Length = 952
Score = 988 (352.9 bits), Expect = 3.9e-108, Sum P(2) = 3.9e-108
Identities = 186/284 (65%), Positives = 226/284 (79%)
Query: 562 KLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSICHTATIIANAFMHSGTTSD 621
K+ KILSGE++I+LHLQFLIR+N TD++ILKNTK+++R S+CHTAT+IAN+FMH GTTSD
Sbjct: 323 KMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSD 382
Query: 622 QFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRETGPTSXXXXXXXX 681
QFLRDNLEWLARATNWAK TATASLGVIH+GHE EAL M +YLP++T P S
Sbjct: 383 QFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGL 442
Query: 682 XXXXXIHANHGAVINDYLLGQVKDATNEMVRHXXXXXXXXXXXXXXRDDIYEQLKFNLYQ 741
IHANHG I DYLL Q+K+A+N++VRH R D+Y+ LK NLYQ
Sbjct: 443 YALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQ 502
Query: 742 DDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQLENA 801
DDAVTGEAAG+A+GLV+LGSK+ AI+DMV YA+ETQHEKILRGLAVGI+ +MYG++E A
Sbjct: 503 DDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEA 562
Query: 802 DDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAI 845
D L+ LC +KD ILRRSGMYT+AMAYCGSG+N A +RLLH A+
Sbjct: 563 DALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAV 606
Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
Identities = 225/494 (45%), Positives = 298/494 (60%)
Query: 43 LAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSAD 102
L MS +Q++ FR ++LR LV++Y +L PD++N+ QC I+LDDP++V+++L KLV D
Sbjct: 182 LCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLV--KED 239
Query: 103 DDLMAAQIGFDLYESATQAFLASVLQELKTCAPIPDATHVVVKVPVXXXXXXXXXXXXXX 162
+ LMA QI FDLYESA+Q FL+SV+Q L+T V P+
Sbjct: 240 NLLMAYQICFDLYESASQQFLSSVIQNLRT-----------VGTPIASVPGSTNTGTVPG 288
Query: 163 XXXXXXXSGPSSTTPGPET-KTLESLNEKEKQLQARITKLSKILSGEVSIDLHLQFLIRS 221
T G KT ++ E + Q K+ KILSGE++I+LHLQFLIR+
Sbjct: 289 PEKDSDSMETEEKTAGAVAGKTPDASPEPKDQT----LKMIKILSGEMAIELHLQFLIRN 344
Query: 222 NKTDMLILKNTKESIRVSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTAT 281
N TD++ILKNTK+++R S+CHTAT+IAN+FMH GTTSDQFLRDNLEWLARATNWAK TAT
Sbjct: 345 NNTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTAT 404
Query: 282 ASLGVIHRGHETEALAHMQSYLPRETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQV 341
ASLGVIH+GHE EAL M +YLP++T P S IHANHG I DYLL Q+
Sbjct: 405 ASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQL 464
Query: 342 KDATNEDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEK-ILRGLAVGISF-- 398
K+A+N+ + + +GL +G+ A QD+ K ++ + G A G++
Sbjct: 465 KNASND---IVRHGGSLGLGLAAMGT----ARQDVYDLLKTNLYQDDAVTGEAAGLALGL 517
Query: 399 IMYGQLENA---DDLVRDLCEEKDAILRRSGMYTIAMAYCVSYLYFDLFSDLTYRI---V 452
+M G +NA +D+V E + + R IA+ D + R +
Sbjct: 518 VMLGS-KNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPI 576
Query: 453 KNRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFRTLFYVAPAC 512
RSGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV +LGFILFRT C
Sbjct: 577 LRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRT----PEQC 632
Query: 513 TRSPWPGVISLLDD 526
P V+SLL +
Sbjct: 633 -----PSVVSLLSE 641
Score = 243 (90.6 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 72/177 (40%), Positives = 98/177 (55%)
Query: 729 DDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEK-ILRGLA 787
D + QLK N D + + +GL +G+ A QD+ K ++ + G A
Sbjct: 458 DYLLNQLK-NASND--IVRHGGSLGLGLAAMGT----ARQDVYDLLKTNLYQDDAVTGEA 510
Query: 788 VGISF--IMYGQLENA---DDLVRDLCEEKDAILRRSGMYTIAMAYCG--SGSNVATKRL 840
G++ +M G +NA +D+V E + + R IA+ G ++ + L
Sbjct: 511 AGLALGLVMLGS-KNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESL 569
Query: 841 LHDA--ILRRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILF 895
D ILRRSGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV +LGFILF
Sbjct: 570 CRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILF 626
Score = 101 (40.6 bits), Expect = 3.9e-108, Sum P(2) = 3.9e-108
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 519 GVISLLDDPMIELKEFSLKKLNDIVDDFWPE 549
G+ISLLD+ +LKEF+L KLN +V+DFW E
Sbjct: 6 GIISLLDEEEPQLKEFALHKLNAVVNDFWAE 36
>UNIPROTKB|G3V8B6 [details] [associations]
symbol:Psmd1 "26S proteasome non-ATPase regulatory subunit
1" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 RGD:621669 INTERPRO:IPR002015 GO:GO:0030234
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 GeneTree:ENSGT00550000074915
OMA:CVENAEL Pfam:PF01851 UniGene:Rn.2891 EMBL:CH474004
Ensembl:ENSRNOT00000024306 Uniprot:G3V8B6
Length = 953
Score = 988 (352.9 bits), Expect = 3.9e-108, Sum P(2) = 3.9e-108
Identities = 186/284 (65%), Positives = 226/284 (79%)
Query: 562 KLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSICHTATIIANAFMHSGTTSD 621
K+ KILSGE++I+LHLQFLIR+N TD++ILKNTK+++R S+CHTAT+IAN+FMH GTTSD
Sbjct: 324 KMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSD 383
Query: 622 QFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRETGPTSXXXXXXXX 681
QFLRDNLEWLARATNWAK TATASLGVIH+GHE EAL M +YLP++T P S
Sbjct: 384 QFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGL 443
Query: 682 XXXXXIHANHGAVINDYLLGQVKDATNEMVRHXXXXXXXXXXXXXXRDDIYEQLKFNLYQ 741
IHANHG I DYLL Q+K+A+N++VRH R D+Y+ LK NLYQ
Sbjct: 444 YALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQ 503
Query: 742 DDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQLENA 801
DDAVTGEAAG+A+GLV+LGSK+ AI+DMV YA+ETQHEKILRGLAVGI+ +MYG++E A
Sbjct: 504 DDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEA 563
Query: 802 DDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAI 845
D L+ LC +KD ILRRSGMYT+AMAYCGSG+N A +RLLH A+
Sbjct: 564 DALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAV 607
Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
Identities = 225/494 (45%), Positives = 298/494 (60%)
Query: 43 LAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSAD 102
L MS +Q++ FR ++LR LV++Y +L PD++N+ QC I+LDDP++V+++L KLV D
Sbjct: 183 LCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLV--KED 240
Query: 103 DDLMAAQIGFDLYESATQAFLASVLQELKTCAPIPDATHVVVKVPVXXXXXXXXXXXXXX 162
+ LMA QI FDLYESA+Q FL+SV+Q L+T V P+
Sbjct: 241 NLLMAYQICFDLYESASQQFLSSVIQNLRT-----------VGTPIASVPGSTNTGTVPG 289
Query: 163 XXXXXXXSGPSSTTPGPET-KTLESLNEKEKQLQARITKLSKILSGEVSIDLHLQFLIRS 221
T G KT ++ E + Q K+ KILSGE++I+LHLQFLIR+
Sbjct: 290 PEKDSDSMETEEKTAGAVAGKTPDASPEPKDQT----LKMIKILSGEMAIELHLQFLIRN 345
Query: 222 NKTDMLILKNTKESIRVSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTAT 281
N TD++ILKNTK+++R S+CHTAT+IAN+FMH GTTSDQFLRDNLEWLARATNWAK TAT
Sbjct: 346 NNTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTAT 405
Query: 282 ASLGVIHRGHETEALAHMQSYLPRETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQV 341
ASLGVIH+GHE EAL M +YLP++T P S IHANHG I DYLL Q+
Sbjct: 406 ASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQL 465
Query: 342 KDATNEDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEK-ILRGLAVGISF-- 398
K+A+N+ + + +GL +G+ A QD+ K ++ + G A G++
Sbjct: 466 KNASND---IVRHGGSLGLGLAAMGT----ARQDVYDLLKTNLYQDDAVTGEAAGLALGL 518
Query: 399 IMYGQLENA---DDLVRDLCEEKDAILRRSGMYTIAMAYCVSYLYFDLFSDLTYRI---V 452
+M G +NA +D+V E + + R IA+ D + R +
Sbjct: 519 VMLGS-KNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPI 577
Query: 453 KNRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFRTLFYVAPAC 512
RSGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV +LGFILFRT C
Sbjct: 578 LRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRT----PEQC 633
Query: 513 TRSPWPGVISLLDD 526
P V+SLL +
Sbjct: 634 -----PSVVSLLSE 642
Score = 243 (90.6 bits), Expect = 7.6e-22, Sum P(2) = 7.6e-22
Identities = 72/177 (40%), Positives = 98/177 (55%)
Query: 729 DDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEK-ILRGLA 787
D + QLK N D + + +GL +G+ A QD+ K ++ + G A
Sbjct: 459 DYLLNQLK-NASND--IVRHGGSLGLGLAAMGT----ARQDVYDLLKTNLYQDDAVTGEA 511
Query: 788 VGISF--IMYGQLENA---DDLVRDLCEEKDAILRRSGMYTIAMAYCG--SGSNVATKRL 840
G++ +M G +NA +D+V E + + R IA+ G ++ + L
Sbjct: 512 AGLALGLVMLGS-KNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESL 570
Query: 841 LHDA--ILRRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILF 895
D ILRRSGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV +LGFILF
Sbjct: 571 CRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILF 627
Score = 101 (40.6 bits), Expect = 3.9e-108, Sum P(2) = 3.9e-108
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 519 GVISLLDDPMIELKEFSLKKLNDIVDDFWPE 549
G+ISLLD+ +LKEF+L KLN +V+DFW E
Sbjct: 7 GIISLLDEEEPQLKEFALHKLNAVVNDFWAE 37
>RGD|621669 [details] [associations]
symbol:Psmd1 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 1" species:10116 "Rattus norvegicus" [GO:0022624
"proteasome accessory complex" evidence=ISO;ISS] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 RGD:621669 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0042176 GO:GO:0022624 eggNOG:COG5116
HOGENOM:HOG000189403 KO:K03032 Pfam:PF01851 CTD:5707
HOVERGEN:HBG007543 OrthoDB:EOG4X97GG EMBL:AJ006340 IPI:IPI00212512
RefSeq:NP_114184.1 UniGene:Rn.2891 ProteinModelPortal:O88761
IntAct:O88761 STRING:O88761 PhosphoSite:O88761 PRIDE:O88761
GeneID:83806 KEGG:rno:83806 UCSC:RGD:621669 InParanoid:O88761
NextBio:616403 ArrayExpress:O88761 Genevestigator:O88761
GermOnline:ENSRNOG00000017730 Uniprot:O88761
Length = 953
Score = 988 (352.9 bits), Expect = 3.9e-108, Sum P(2) = 3.9e-108
Identities = 186/284 (65%), Positives = 226/284 (79%)
Query: 562 KLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSICHTATIIANAFMHSGTTSD 621
K+ KILSGE++I+LHLQFLIR+N TD++ILKNTK+++R S+CHTAT+IAN+FMH GTTSD
Sbjct: 324 KMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSD 383
Query: 622 QFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRETGPTSXXXXXXXX 681
QFLRDNLEWLARATNWAK TATASLGVIH+GHE EAL M +YLP++T P S
Sbjct: 384 QFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGL 443
Query: 682 XXXXXIHANHGAVINDYLLGQVKDATNEMVRHXXXXXXXXXXXXXXRDDIYEQLKFNLYQ 741
IHANHG I DYLL Q+K+A+N++VRH R D+Y+ LK NLYQ
Sbjct: 444 YALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQ 503
Query: 742 DDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQLENA 801
DDAVTGEAAG+A+GLV+LGSK+ AI+DMV YA+ETQHEKILRGLAVGI+ +MYG++E A
Sbjct: 504 DDAVTGEAAGLALGLVMLGSKNTQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEA 563
Query: 802 DDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAI 845
D L+ LC +KD ILRRSGMYT+AMAYCGSG+N A +RLLH A+
Sbjct: 564 DALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAV 607
Score = 927 (331.4 bits), Expect = 4.3e-93, P = 4.3e-93
Identities = 219/491 (44%), Positives = 294/491 (59%)
Query: 43 LAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSAD 102
L MS +Q++ FR ++LR LV++Y +L PD++N+ QC I+LDD ++V+++L KLV D
Sbjct: 183 LCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDTQAVSDILEKLV--KED 240
Query: 103 DDLMAAQIGFDLYESATQAFLASVLQELKTCAPIPDATHVVVKVPVXXXXXXXXXXXXXX 162
+ LMA QI FDLYESA+Q FL+SV+Q L+T V P+
Sbjct: 241 NLLMAYQICFDLYESASQQFLSSVIQNLRT-----------VGTPIASVPGSTNTGTVPG 289
Query: 163 XXXXXXXSGPSSTTPGPET-KTLESLNEKEKQLQARITKLSKILSGEVSIDLHLQFLIRS 221
T G KT ++ E + Q K+ KILSGE++I+LHLQFLIR+
Sbjct: 290 PEKDSDSMETEEKTAGAVAGKTPDASPEPKDQT----LKMIKILSGEMAIELHLQFLIRN 345
Query: 222 NKTDMLILKNTKESIRVSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTAT 281
N TD++ILKNTK+++R S+CHTAT+IAN+FMH GTTSDQFLRDNLEWLARATNWAK TAT
Sbjct: 346 NNTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTAT 405
Query: 282 ASLGVIHRGHETEALAHMQSYLPRETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQV 341
ASLGVIH+GHE EAL M +YLP++T P S IHANHG I DYLL Q+
Sbjct: 406 ASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQL 465
Query: 342 KDATNEDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKIL---RGLAVGISF 398
K+A+N+ + + +GL +G+ + + D++ Q + + GLA+G+
Sbjct: 466 KNASND---IVRHGGSLGLGLAAMGTARQD-VYDLLK-TNLYQDDAVTGEAAGLALGLVM 520
Query: 399 IMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCVSYLYFDLFSDLTYRI---VKNR 455
+ + +D+V E + + R IA+ D + R + R
Sbjct: 521 LGSKNTQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRR 580
Query: 456 SGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFRTLFYVAPACTRS 515
SGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV +LGFILFRT C
Sbjct: 581 SGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRT----PEQC--- 633
Query: 516 PWPGVISLLDD 526
P V+SLL +
Sbjct: 634 --PSVVSLLSE 642
Score = 242 (90.2 bits), Expect = 9.8e-22, Sum P(2) = 9.8e-22
Identities = 67/174 (38%), Positives = 95/174 (54%)
Query: 729 DDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKIL---RG 785
D + QLK N D + + +GL +G+ + + D++ Q + + G
Sbjct: 459 DYLLNQLK-NASND--IVRHGGSLGLGLAAMGTARQD-VYDLLK-TNLYQDDAVTGEAAG 513
Query: 786 LAVGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCG--SGSNVATKRLLHD 843
LA+G+ + + +D+V E + + R IA+ G ++ + L D
Sbjct: 514 LALGLVMLGSKNTQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRD 573
Query: 844 A--ILRRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILF 895
ILRRSGMYT+AMAYCGSG+N A +RLLHVAVSDVNDDVRR AV +LGFILF
Sbjct: 574 KDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILF 627
Score = 101 (40.6 bits), Expect = 3.9e-108, Sum P(2) = 3.9e-108
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 519 GVISLLDDPMIELKEFSLKKLNDIVDDFWPE 549
G+ISLLD+ +LKEF+L KLN +V+DFW E
Sbjct: 7 GIISLLDEEEPQLKEFALHKLNAVVNDFWAE 37
>DICTYBASE|DDB_G0287953 [details] [associations]
symbol:psmD1 "26S proteasome regulatory subunit S1"
species:44689 "Dictyostelium discoideum" [GO:0050790 "regulation of
catalytic activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 dictyBase:DDB_G0287953
INTERPRO:IPR002015 GO:GO:0005634 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GenomeReviews:CM000154_GR GO:GO:0004175 GO:GO:0006511 GO:GO:0042176
EMBL:AAFI02000105 GO:GO:0005838 eggNOG:COG5116 KO:K03032
OMA:CVENAEL Pfam:PF01851 RefSeq:XP_636972.1
ProteinModelPortal:Q54JM5 IntAct:Q54JM5 STRING:Q54JM5 PRIDE:Q54JM5
EnsemblProtists:DDB0232977 GeneID:8626381 KEGG:ddi:DDB_G0287953
ProtClustDB:CLSZ2728851 Uniprot:Q54JM5
Length = 975
Score = 669 (240.6 bits), Expect = 1.9e-81, Sum P(2) = 1.9e-81
Identities = 148/354 (41%), Positives = 214/354 (60%)
Query: 550 NEKE---KQLQARITKLSKILSGEVSIDLHLQFLIRSNKTDMLIL---KNTKESIRVSIC 603
NEK + R+ +L IL G+VSI ++L+FL R+ TDM IL K T E + +I
Sbjct: 296 NEKSGGSSSFEQRLERLHSILIGDVSIGMNLEFLYRNCSTDMHILQSMKTTSELHKGAIF 355
Query: 604 HTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQS 663
++ T+ ANA MH+GTT D FLR N+EWL ++T+W K +A +SLGVI++GH E+ + +++
Sbjct: 356 YSGTLFANALMHAGTTRDTFLRSNIEWLYKSTHWTKFSAISSLGVINKGHIKESKSLLKT 415
Query: 664 YLPRETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQVKDATNEMVRHXXXXXXXXXX 723
YLP + + IHA+HG I DYL+ ++ N ++ H
Sbjct: 416 YLPGASVNQTPYSESGSLYALGLIHASHGEEIIDYLVEKLH-INNAILHHGASLGLGLAA 474
Query: 724 XXXXRDDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKIL 783
RDD+YE LK LY DDAV+GEAAG+AMGLV+LGS ++ AI++M+AYA ETQHEK +
Sbjct: 475 MATGRDDLYEDLKSVLYNDDAVSGEAAGLAMGLVMLGSGAKKAIEEMLAYAHETQHEKTI 534
Query: 784 RGLAVGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHD 843
R L++G++F+MYG+ E+AD L+ + +KD ++R GMY IA AYCG+G N A ++LLH
Sbjct: 535 RSLSMGLAFLMYGKEESADTLIEQMIGDKDPLIRYGGMYAIAFAYCGTGHNDALRKLLHV 594
Query: 844 AI------LRRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALG 891
A+ +RR+ + I K + +A S N VR A ALG
Sbjct: 595 AVSDGTDSVRRAAVTCIGFVLSRQPEK-CPKAIALLAES-YNPHVRYGAAFALG 646
Score = 467 (169.5 bits), Expect = 2.9e-57, Sum P(3) = 2.9e-57
Identities = 119/346 (34%), Positives = 189/346 (54%)
Query: 173 SSTTPGPETKTLE--SLNEKE---KQLQARITKLSKILSGEVSIDLHLQFLIRSNKTDML 227
++TTP ++ ++ S NEK + R+ +L IL G+VSI ++L+FL R+ TDM
Sbjct: 279 TTTTPASDSMEIDIDSGNEKSGGSSSFEQRLERLHSILIGDVSIGMNLEFLYRNCSTDMH 338
Query: 228 IL---KNTKESIRVSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASL 284
IL K T E + +I ++ T+ ANA MH+GTT D FLR N+EWL ++T+W K +A +SL
Sbjct: 339 ILQSMKTTSELHKGAIFYSGTLFANALMHAGTTRDTFLRSNIEWLYKSTHWTKFSAISSL 398
Query: 285 GVIHRGHETEALAHMQSYLPRETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQVKDA 344
GVI++GH E+ + +++YLP + + IHA+HG I DYL+ ++
Sbjct: 399 GVINKGHIKESKSLLKTYLPGASVNQTPYSESGSLYALGLIHASHGEEIIDYLVEKL--- 455
Query: 345 TNEDDAVTGEAAGIAMGLVLLGSKSESAIQDM--VAYAKETQHEKILRGLAVGISFIMYG 402
+ ++A+ A + +GL + + + +D+ V Y + + GLA+G+ + G
Sbjct: 456 -HINNAILHHGASLGLGLAAMATGRDDLYEDLKSVLYNDDAVSGEAA-GLAMGLVMLGSG 513
Query: 403 QLENADDLVRDLCE-EKDAILRRSGMYTIAMAY----CVSYLYFDLFSDLTYRIVKNRSG 457
+ ++++ E + + +R M + Y L + D I G
Sbjct: 514 AKKAIEEMLAYAHETQHEKTIRSLSMGLAFLMYGKEESADTLIEQMIGDKDPLI--RYGG 571
Query: 458 MYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFR 503
MY IA AYCG+G N A ++LLHVAVSD D VRR AVT +GF+L R
Sbjct: 572 MYAIAFAYCGTGHNDALRKLLHVAVSDGTDSVRRAAVTCIGFVLSR 617
Score = 202 (76.2 bits), Expect = 6.9e-25, Sum P(2) = 6.9e-25
Identities = 53/172 (30%), Positives = 91/172 (52%)
Query: 729 DDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDM--VAYAKETQHEKILRGL 786
++I + L L+ ++A+ A + +GL + + + +D+ V Y + + GL
Sbjct: 445 EEIIDYLVEKLHINNAILHHGASLGLGLAAMATGRDDLYEDLKSVLYNDDAVSGEAA-GL 503
Query: 787 AVGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVAT--KRLL--H 842
A+G+ + G + ++++ E + RS +A G + T ++++
Sbjct: 504 AMGLVMLGSGAKKAIEEMLAYAHETQHEKTIRSLSMGLAFLMYGKEESADTLIEQMIGDK 563
Query: 843 DAILRRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFIL 894
D ++R GMY IA AYCG+G N A ++LLHVAVSD D VRR AVT +GF+L
Sbjct: 564 DPLIRYGGMYAIAFAYCGTGHNDALRKLLHVAVSDGTDSVRRAAVTCIGFVL 615
Score = 173 (66.0 bits), Expect = 1.9e-81, Sum P(2) = 1.9e-81
Identities = 39/100 (39%), Positives = 60/100 (60%)
Query: 31 VHSALKSCVPWCLAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVA 90
V+S L C+ C S+ +R FR +L LV L+ + PDY+++ QC I+LD+ VA
Sbjct: 171 VNSMLSYCLHICNV--SVNNRHFRHSVLGILVNLHLAQEKPDYLSVVQCLIFLDNHIEVA 228
Query: 91 NLLGKLVAGSADDDLMAAQIGFDLYESATQAFLASVLQEL 130
+L L+ + L+A QIGFDL++++TQ FL +V L
Sbjct: 229 TILLSLIKKDEESLLLAYQIGFDLFQNSTQQFLLNVRNRL 268
Score = 91 (37.1 bits), Expect = 8.3e-73, Sum P(2) = 8.3e-73
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 521 ISLLDDPMIELKEFSLKKLNDIVDDFWPE 549
+SLLD+ +ELK +SL+KL+ VD+FW E
Sbjct: 11 LSLLDEDQLELKSYSLEKLDSCVDEFWSE 39
Score = 72 (30.4 bits), Expect = 2.9e-57, Sum P(3) = 2.9e-57
Identities = 30/153 (19%), Positives = 62/153 (40%)
Query: 753 AMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQLENADDLVRDLCEEK 812
A+ G+ A++ ++ A + + R I F++ Q E + L E
Sbjct: 574 AIAFAYCGTGHNDALRKLLHVAVSDGTDSVRRAAVTCIGFVLSRQPEKCPKAIALLAESY 633
Query: 813 DAILRRSGMYTIAMAYCGSGSNVAT---KRLLHDAI--LRRSGMYTIAMAYCGSGSNVA- 866
+ +R + + +A G+G A K L D++ ++++ ++AM + +
Sbjct: 634 NPHVRYGAAFALGIACAGTGQRDALEILKSLTTDSVGYVKQAAWISMAMVLIQTSKELVP 693
Query: 867 ----TKRLLHVAVSDVNDDVRRE--AVTALGFI 893
++L +SD +D + AV A G I
Sbjct: 694 EAETARKLFATCISDKREDSMSKFGAVLAFGVI 726
Score = 66 (28.3 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 36/166 (21%), Positives = 73/166 (43%)
Query: 739 LYQDDAVTGEAAGIAMGLVLLG--SKSESAIQDMV--AYAKETQHEKILRGLAVGISFIM 794
LY+ T +A ++G++ G +S+S ++ + A +T + + A+G+
Sbjct: 383 LYKSTHWTKFSAISSLGVINKGHIKESKSLLKTYLPGASVNQTPYSESGSLYALGLIHAS 442
Query: 795 YGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVA---TKRLLH--DAILRRS 849
+G+ E D LV L +AIL + +A +G + K +L+ DA+ +
Sbjct: 443 HGE-EIIDYLVEKL-HINNAILHHGASLGLGLAAMATGRDDLYEDLKSVLYNDDAVSGEA 500
Query: 850 GMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILF 895
+ + GSG+ A + +L A ++ R L F+++
Sbjct: 501 AGLAMGLVMLGSGAKKAIEEMLAYAHETQHEKTIRSLSMGLAFLMY 546
Score = 46 (21.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 29/154 (18%), Positives = 57/154 (37%)
Query: 359 AMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQLENADDLVRDLCEEK 418
A+ G+ A++ ++ A + + R I F++ Q E + L E
Sbjct: 574 AIAFAYCGTGHNDALRKLLHVAVSDGTDSVRRAAVTCIGFVLSRQPEKCPKAIALLAESY 633
Query: 419 DAILRRSGMYTIAMAYCVSYLYFD---LFSDLTYRIVK--NRSGMYTIAMAYCGSGSNVA 473
+ +R + + +A C D + LT V ++ ++AM + +
Sbjct: 634 NPHVRYGAAFALGIA-CAGTGQRDALEILKSLTTDSVGYVKQAAWISMAMVLIQTSKELV 692
Query: 474 -----TKRLLHVAVSDVNDDVRRE--AVTALGFI 500
++L +SD +D + AV A G I
Sbjct: 693 PEAETARKLFATCISDKREDSMSKFGAVLAFGVI 726
Score = 42 (19.8 bits), Expect = 1.2e-67, Sum P(2) = 1.2e-67
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 333 INDYLLGQVKDATNEDDAVTGEAAGIAMGL 362
I++Y+ +++ +TN+D + I MG+
Sbjct: 108 IDEYI--KLRTSTNKDTVINPHLESIVMGM 135
Score = 41 (19.5 bits), Expect = 5.1e-54, Sum P(3) = 5.1e-54
Identities = 16/61 (26%), Positives = 26/61 (42%)
Query: 705 DATNEMVRHXXXXXXXXXXXXXXRDDIYEQLKFNLYQDDA-VTGEAAGIAMGLVLLGSKS 763
++ N VR+ + D E LK +L D +AA I+M +VL+ +
Sbjct: 631 ESYNPHVRYGAAFALGIACAGTGQRDALEILK-SLTTDSVGYVKQAAWISMAMVLIQTSK 689
Query: 764 E 764
E
Sbjct: 690 E 690
>POMBASE|SPBC17D11.07c [details] [associations]
symbol:rpn2 "19S proteasome regulatory subunit Rpn2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISO] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0004175 "endopeptidase
activity" evidence=ISO] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 PomBase:SPBC17D11.07c INTERPRO:IPR002015
GO:GO:0005829 GO:GO:0005634 GO:GO:0007346 GO:GO:0030234
SUPFAM:SSF48371 GO:GO:0043161 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:CU329671 GO:GO:0050790 GenomeReviews:CU329671_GR GO:GO:0042176
GO:GO:0008540 eggNOG:COG5116 HOGENOM:HOG000189403 KO:K03032
OMA:CVENAEL Pfam:PF01851 PIR:T39718 RefSeq:NP_596381.1
ProteinModelPortal:O74762 IntAct:O74762 STRING:O74762
EnsemblFungi:SPBC17D11.07c.1 GeneID:2540191 KEGG:spo:SPBC17D11.07c
OrthoDB:EOG4KD9V5 NextBio:20801323 Uniprot:O74762
Length = 965
Score = 651 (234.2 bits), Expect = 4.0e-76, Sum P(2) = 4.0e-76
Identities = 138/338 (40%), Positives = 204/338 (60%)
Query: 565 KILSGEVSIDLHLQFLIRSNKTDMLILKNTKESI--RVSICHTATIIANAFMHSGTTSDQ 622
+ILSGE ++ +FL N TDMLIL TK+S+ R S+ H A ANAFM+ GT+SD
Sbjct: 307 RILSGEQTVKYDREFLYAHNNTDMLILNRTKDSLEARNSVFHNAVTFANAFMNFGTSSDS 366
Query: 623 FLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRETGPTSXXXXXXXXX 682
F RDNL WL++A NW+K TATA+LGVIHRG+ +A+ ++ YLP E P+S
Sbjct: 367 FFRDNLSWLSKANNWSKFTATAALGVIHRGYYNQAMNILRPYLPEEDAPSSSTYSEGGAF 426
Query: 683 XXXX-IHANHGAVINDYLLGQVKDATNEMVRHXXXXXXXXXXXXXXRDDIYEQLKFNLYQ 741
IHANHG + +YL Q+K +E+V++ + +YE +K L+
Sbjct: 427 YAMGLIHANHGRGVTEYLREQLKHTEDEIVQYGLLLGIGLTGMASRDETLYESVKTILFN 486
Query: 742 DDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQLENA 801
D+AV G AAGI+MGL++LG+ S +AI +M+ YA ETQHEKI+RGL +GI+ I+YG+ + A
Sbjct: 487 DNAVAGSAAGISMGLIMLGTASSAAIDEMLQYAHETQHEKIIRGLGIGIALIVYGRQQEA 546
Query: 802 DDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAI------LRRSGMYTIA 855
D ++++L + D LR +GM+ A+AYCG+ ++ + +LH ++ +RR+ + +
Sbjct: 547 DGIIKELNNDLDPTLRYAGMFATALAYCGTSNSKIVRDVLHISVSDVNDDVRRAAVCALG 606
Query: 856 MAYCGSGSN--VATKRLLHVAVSDVNDDVRREAVTALG 891
C N ++T LL V N VR + ALG
Sbjct: 607 FI-CFKDPNALISTVELL---VDSYNPHVRYGSAIALG 640
Score = 503 (182.1 bits), Expect = 1.0e-54, Sum P(3) = 1.0e-54
Identities = 127/340 (37%), Positives = 188/340 (55%)
Query: 177 PGPET-KTLESLN-EKEKQLQARITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKE 234
P P + E N + +K+ + + +ILSGE ++ +FL N TDMLIL TK+
Sbjct: 279 PSPSVANSEEDANADSKKEDSSPCGYIIRILSGEQTVKYDREFLYAHNNTDMLILNRTKD 338
Query: 235 SI--RVSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHE 292
S+ R S+ H A ANAFM+ GT+SD F RDNL WL++A NW+K TATA+LGVIHRG+
Sbjct: 339 SLEARNSVFHNAVTFANAFMNFGTSSDSFFRDNLSWLSKANNWSKFTATAALGVIHRGYY 398
Query: 293 TEALAHMQSYLPRETGPTSXXXXXXXXXXXXX-IHANHGAVINDYLLGQVKDATNEDDAV 351
+A+ ++ YLP E P+S IHANHG + +YL Q+K ED+ V
Sbjct: 399 NQAMNILRPYLPEEDAPSSSTYSEGGAFYAMGLIHANHGRGVTEYLREQLKHT--EDEIV 456
Query: 352 T-GEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISF--IMYGQLENA- 407
G GI GL + S+ E+ + + ++ + G A GIS IM G +A
Sbjct: 457 QYGLLLGI--GLTGMASRDETLYESVKTILF---NDNAVAGSAAGISMGLIMLGTASSAA 511
Query: 408 -DDLVRDLCE-EKDAILRRSGMYTIAMAYCVSYLYFDLFSDLTYRI--VKNRSGMYTIAM 463
D++++ E + + I+R G+ + Y + +L + +GM+ A+
Sbjct: 512 IDEMLQYAHETQHEKIIRGLGIGIALIVYGRQQEADGIIKELNNDLDPTLRYAGMFATAL 571
Query: 464 AYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFR 503
AYCG+ ++ + +LH++VSDVNDDVRR AV ALGFI F+
Sbjct: 572 AYCGTSNSKIVRDVLHISVSDVNDDVRRAAVCALGFICFK 611
Score = 188 (71.2 bits), Expect = 3.8e-20, Sum P(2) = 3.8e-20
Identities = 58/172 (33%), Positives = 92/172 (53%)
Query: 733 EQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISF 792
EQLK + +D + + +GL + S+ E+ + + ++ + G A GIS
Sbjct: 446 EQLK---HTEDEIVQYGLLLGIGLTGMASRDETLYESVKTILF---NDNAVAGSAAGISM 499
Query: 793 --IMYGQLENA--DDLVRDLCE-EKDAILRRSGMYTIAMAYCGSGSNV--ATKRLLHDA- 844
IM G +A D++++ E + + I+R G+ IA+ G K L +D
Sbjct: 500 GLIMLGTASSAAIDEMLQYAHETQHEKIIRGLGI-GIALIVYGRQQEADGIIKELNNDLD 558
Query: 845 -ILRRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILF 895
LR +GM+ A+AYCG+ ++ + +LH++VSDVNDDVRR AV ALGFI F
Sbjct: 559 PTLRYAGMFATALAYCGTSNSKIVRDVLHISVSDVNDDVRRAAVCALGFICF 610
Score = 142 (55.0 bits), Expect = 4.0e-76, Sum P(2) = 4.0e-76
Identities = 34/89 (38%), Positives = 54/89 (60%)
Query: 43 LAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSAD 102
LAM+ + FR ++LR L+ + + + PDY ++ +C ++L+D A LL KL + + D
Sbjct: 190 LAMTVVLDIEFRNRLLRLLLSSFLTETEPDYFSVGKCVVHLNDASVAAKLLMKLSSQNDD 249
Query: 103 DDLMAA-QIGFDLYESATQAFLASVLQEL 130
L+ A Q+ FDL +SA Q FL SV+ L
Sbjct: 250 KSLLTAYQLAFDLEDSAPQEFLNSVMDLL 278
Score = 74 (31.1 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 36/172 (20%), Positives = 66/172 (38%)
Query: 729 DDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAV 788
D I ++L +L D A A L G+ + ++D++ + ++ + R
Sbjct: 547 DGIIKELNNDL---DPTLRYAGMFATALAYCGTSNSKIVRDVLHISVSDVNDDVRRAAVC 603
Query: 789 GISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVAT---KRLLHDA- 844
+ FI + V L + + +R + +A SGSN A RL+ DA
Sbjct: 604 ALGFICFKDPNALISTVELLVDSYNPHVRYGSAIALGIACANSGSNAALDLLSRLVEDAT 663
Query: 845 -ILRRSGMYTIAMAYCGSGSNVATKRL-LHVAVSDVNDDVRREAVTALGFIL 894
+R+ M AM + +K + V ++ +A+ LG L
Sbjct: 664 DFVRQGAMIAQAMILTQHNDQLNSKVSGIRKHFEQVINEKHEDALAKLGATL 715
Score = 68 (29.0 bits), Expect = 2.5e-68, Sum P(2) = 2.5e-68
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 519 GVISLLDDPMIELKEFSLKKLNDIVDDFWPE 549
G+++LLD+ EL+ +L K+ + +D WPE
Sbjct: 17 GLMALLDEQERELQVHALLKIYEFIDQLWPE 47
Score = 37 (18.1 bits), Expect = 1.0e-54, Sum P(3) = 1.0e-54
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 638 AKLTATASLGVIHRGHETEALA 659
AKL AT + G+I G +A
Sbjct: 709 AKLGATLAQGIIDAGGRNVTIA 730
Score = 37 (18.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 276 AKLTATASLGVIHRGHETEALA 297
AKL AT + G+I G +A
Sbjct: 709 AKLGATLAQGIIDAGGRNVTIA 730
>TAIR|locus:2046402 [details] [associations]
symbol:AT2G32730 species:3702 "Arabidopsis thaliana"
[GO:0000502 "proteasome complex" evidence=IEA;IDA] [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=ISS;TAS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006094 "gluconeogenesis"
evidence=RCA] [GO:0007010 "cytoskeleton organization" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0010498 "proteasomal
protein catabolic process" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
GO:GO:0005829 GO:GO:0030234 EMBL:CP002685 GenomeReviews:CT485783_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 EMBL:AC003974 eggNOG:COG5116
HOGENOM:HOG000189403 KO:K03032 Pfam:PF01851 EMBL:AY099861
IPI:IPI00538191 PIR:T00795 RefSeq:NP_180832.1 UniGene:At.19478
ProteinModelPortal:O48844 SMR:O48844 IntAct:O48844 STRING:O48844
PaxDb:O48844 PRIDE:O48844 ProMEX:O48844 EnsemblPlants:AT2G32730.1
GeneID:817833 KEGG:ath:AT2G32730 TAIR:At2g32730 InParanoid:O48844
OMA:LLCNFWG PhylomeDB:O48844 ProtClustDB:CLSN2681948
ArrayExpress:O48844 Genevestigator:O48844 Uniprot:O48844
Length = 1004
Score = 707 (253.9 bits), Expect = 4.1e-76, Sum P(2) = 4.1e-76
Identities = 152/343 (44%), Positives = 212/343 (61%)
Query: 559 RITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESI--RVSICHTATIIANAFMHS 616
R+TK+ ILSGE SI L LQFL NK+D+LILK K+S+ R S+CH+ATI ANA MH+
Sbjct: 328 RLTKIKGILSGETSIQLTLQFLYSHNKSDLLILKTIKQSVEMRNSVCHSATIYANAIMHA 387
Query: 617 GTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPR--ETGPTSX 674
GTT D FLR+NL+WL+RATNWAK +ATA LGVIHRGH + + M YLP+ G S
Sbjct: 388 GTTVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPYLPQGGAGGGGSP 447
Query: 675 XXXXXXXXXXXXIHANHGAVINDYLLGQVKDATNEMVRHXXXXXXXXXXXXXXRDDIYEQ 734
IHANHG I +L ++ E+++H ++IY+
Sbjct: 448 YSEGGALYALGLIHANHGEGIKQFLRDSLRSTNVEVIQHGACLGLGLSALGTADEEIYDD 507
Query: 735 LKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIM 794
+K LY D AV GEAAGI+MGL+L+G+ +E A +M+AYA ETQHEKI+RGLA+GI+ +
Sbjct: 508 VKSVLYTDSAVAGEAAGISMGLLLVGTATEKA-SEMLAYAHETQHEKIIRGLALGIALTV 566
Query: 795 YGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAI------LRR 848
YG+ E AD L+ + ++D I+R GMY +A+AY G+ +N A ++LLH A+ +RR
Sbjct: 567 YGREEGADTLIEQMTRDQDPIIRYGGMYALALAYSGTANNKAIRQLLHFAVSDVSDDVRR 626
Query: 849 SGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALG 891
+ + +A+ + T R++ + N VR A A+G
Sbjct: 627 TAV--LALGFVLYSDPEQTPRIVSLLSESYNPHVRYGAALAVG 667
Score = 682 (245.1 bits), Expect = 9.4e-67, P = 9.4e-67
Identities = 192/508 (37%), Positives = 268/508 (52%)
Query: 31 VHSALKSCVPWCLAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVA 90
V L C+ ++ S + R +R ++L LV++Y L PDY+++ QC ++LD+P+ VA
Sbjct: 177 VQGTLSYCIN--VSHSFVNRREYRHEVLSLLVKVYQKLPSPDYLSICQCLMFLDEPQGVA 234
Query: 91 NLLGKLVAG-SADDDLMAAQIGFDLYESATQAFLASVLQELKTCAPIPDATHVVVKVPVX 149
++L KL+ + DD L+A QI FDL E+ QAFL SV L P P V V
Sbjct: 235 SILEKLLRSENKDDALLALQIAFDLVENEHQAFLLSVRDRL----PAPKTRAVEATQAVE 290
Query: 150 XXXXXXXXXXXXXXXXXXXXSGPSSTTPGPETKTLESLNEKEKQLQARITKLSKILSGEV 209
P+ T ET +++ + R+TK+ ILSGE
Sbjct: 291 TTIAPNENPSGDVQMADET---PAQTIVH-ETDPVDATYAE------RLTKIKGILSGET 340
Query: 210 SIDLHLQFLIRSNKTDMLILKNTKESI--RVSICHTATIIANAFMHSGTTSDQFLRDNLE 267
SI L LQFL NK+D+LILK K+S+ R S+CH+ATI ANA MH+GTT D FLR+NL+
Sbjct: 341 SIQLTLQFLYSHNKSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLD 400
Query: 268 WLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPR--ETGPTSXXXXXXXXXXXXXI 325
WL+RATNWAK +ATA LGVIHRGH + + M YLP+ G S I
Sbjct: 401 WLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPYLPQGGAGGGGSPYSEGGALYALGLI 460
Query: 326 HANHGAVINDYLLGQVKDATNEDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQH 385
HANHG I +L ++ +TN + V A + +GL LG+ E I D V T
Sbjct: 461 HANHGEGIKQFLRDSLR-STNVE--VIQHGACLGLGLSALGTADEE-IYDDVKSVLYT-- 514
Query: 386 EKILRGLAVGISF--IMYGQL-ENADDLVRDLCE-EKDAILRRSGMYTIAMAYCVSYLYF 441
+ + G A GIS ++ G E A +++ E + + I+R + Y
Sbjct: 515 DSAVAGEAAGISMGLLLVGTATEKASEMLAYAHETQHEKIIRGLALGIALTVYGREEGAD 574
Query: 442 DLFSDLTYR---IVKNRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALG 498
L +T I++ GMY +A+AY G+ +N A ++LLH AVSDV+DDVRR AV ALG
Sbjct: 575 TLIEQMTRDQDPIIRY-GGMYALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALG 633
Query: 499 FILFRTLFYVAPACTRSPWPGVISLLDD 526
F+L Y P T P ++SLL +
Sbjct: 634 FVL-----YSDPEQT----PRIVSLLSE 652
Score = 195 (73.7 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 57/158 (36%), Positives = 85/158 (53%)
Query: 745 VTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISF--IMYGQL-ENA 801
V A + +GL LG+ E I D V T + + G A GIS ++ G E A
Sbjct: 483 VIQHGACLGLGLSALGTADEE-IYDDVKSVLYT--DSAVAGEAAGISMGLLLVGTATEKA 539
Query: 802 DDLVRDLCEEKDAILRRSGMYTIAMAYCG--SGSNVATKRLLHDA--ILRRSGMYTIAMA 857
+++ E + + R IA+ G G++ +++ D I+R GMY +A+A
Sbjct: 540 SEMLAYAHETQHEKIIRGLALGIALTVYGREEGADTLIEQMTRDQDPIIRYGGMYALALA 599
Query: 858 YCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILF 895
Y G+ +N A ++LLH AVSDV+DDVRR AV ALGF+L+
Sbjct: 600 YSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLY 637
Score = 81 (33.6 bits), Expect = 4.1e-76, Sum P(2) = 4.1e-76
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 519 GVISLLDDPMIELKEFSLKKLNDIVDDFWPE 549
G++++L++P LK +L LN++VD FWPE
Sbjct: 11 GLLAMLNEPHPVLKLHALSNLNNLVDQFWPE 41
>ASPGD|ASPL0000047917 [details] [associations]
symbol:AN1700 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:BN001307 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 EMBL:AACD01000026 InterPro:IPR004155 SMART:SM00567
eggNOG:COG5116 HOGENOM:HOG000189403 KO:K03032 OMA:CVENAEL
Pfam:PF01851 OrthoDB:EOG4KD9V5 RefSeq:XP_659304.1
ProteinModelPortal:Q5BCN0 STRING:Q5BCN0
EnsemblFungi:CADANIAT00008343 GeneID:2874940 KEGG:ani:AN1700.2
Uniprot:Q5BCN0
Length = 1144
Score = 632 (227.5 bits), Expect = 1.8e-75, Sum P(2) = 1.8e-75
Identities = 137/340 (40%), Positives = 203/340 (59%)
Query: 566 ILSGEVSIDLHLQFLIRSNKTDMLILKNTKESI--RVSICHTATIIANAFMHSGTTSDQF 623
IL G +I L+++FL R+++ D+ IL ++++ R SI H+A I+N FM++GT D+F
Sbjct: 422 ILDGIKTIQLNMEFLHRNSRVDIAILNKLRDTLEPRNSIFHSAITISNGFMYAGTAQDKF 481
Query: 624 LRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRET-----GPT-SXXXX 677
RDNLEWL +A NW+K TATA+LGVIHRG+ ++ +Q YLP+E G + S
Sbjct: 482 FRDNLEWLGKAVNWSKFTATAALGVIHRGNLSQGQRLLQPYLPKENSIDGVGNSGSLYSQ 541
Query: 678 XXXXXXXXXIHANHGAVINDYLLGQVKDATNEMVRHXXXXXXXXXXXXXXRDDIYEQLKF 737
I+ANHG + DY+ Q K AT E+++H + IY+ L+
Sbjct: 542 GGSLYALGLIYANHGGMAVDYIRDQFKKATEEVIQHGGALGLGVAGMATGDEGIYDDLRN 601
Query: 738 NLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQ 797
LY D A+ GEA G+AMGLV+LG+ + ++DM+ YA +TQHEKI+RGLA+G++ IMYG+
Sbjct: 602 VLYTDSALNGEAVGLAMGLVMLGTGNMKVLEDMIQYAHDTQHEKIVRGLAMGMALIMYGR 661
Query: 798 LENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAI------LRRSGM 851
E AD+L+ L + D LR G+ TIA+AYCG+ SN A ++LLH A+ +RR +
Sbjct: 662 QEAADELINGLLGDPDPTLRYGGIMTIALAYCGTSSNKAVRKLLHVAVSDVNDDVRRVAV 721
Query: 852 YTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALG 891
++ +V R++ + N VR A ALG
Sbjct: 722 LSLGFILFRKHQSVP--RMVELLSESYNPHVRYGAAMALG 759
Score = 485 (175.8 bits), Expect = 4.6e-55, Sum P(2) = 4.6e-55
Identities = 119/315 (37%), Positives = 178/315 (56%)
Query: 204 ILSGEVSIDLHLQFLIRSNKTDMLILKNTKESI--RVSICHTATIIANAFMHSGTTSDQF 261
IL G +I L+++FL R+++ D+ IL ++++ R SI H+A I+N FM++GT D+F
Sbjct: 422 ILDGIKTIQLNMEFLHRNSRVDIAILNKLRDTLEPRNSIFHSAITISNGFMYAGTAQDKF 481
Query: 262 LRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRET-----GPT-SXXXX 315
RDNLEWL +A NW+K TATA+LGVIHRG+ ++ +Q YLP+E G + S
Sbjct: 482 FRDNLEWLGKAVNWSKFTATAALGVIHRGNLSQGQRLLQPYLPKENSIDGVGNSGSLYSQ 541
Query: 316 XXXXXXXXXIHANHGAVINDYLLGQVKDATNEDDAVTGEAAGIAMGLVLLGSKSESAIQD 375
I+ANHG + DY+ Q K AT E V + +G+ + + E D
Sbjct: 542 GGSLYALGLIYANHGGMAVDYIRDQFKKATEE---VIQHGGALGLGVAGMATGDEGIYDD 598
Query: 376 M--VAYAKETQHEKILRGLAVGISFIMYGQLENADDLVRDLCE-EKDAILRRSGMYTIAM 432
+ V Y + + + GLA+G+ + G ++ +D+++ + + + I+R M +
Sbjct: 599 LRNVLYTDSALNGEAV-GLAMGLVMLGTGNMKVLEDMIQYAHDTQHEKIVRGLAMGMALI 657
Query: 433 AY----CVSYLYFDLFSDLTYRIVKNRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDD 488
Y L L D + G+ TIA+AYCG+ SN A ++LLHVAVSDVNDD
Sbjct: 658 MYGRQEAADELINGLLGDPDPTL--RYGGIMTIALAYCGTSSNKAVRKLLHVAVSDVNDD 715
Query: 489 VRREAVTALGFILFR 503
VRR AV +LGFILFR
Sbjct: 716 VRRVAVLSLGFILFR 730
Score = 213 (80.0 bits), Expect = 4.7e-25, Sum P(2) = 4.7e-25
Identities = 57/162 (35%), Positives = 90/162 (55%)
Query: 743 DAVTGEAAGIAMGLVLLGSKSESAIQDM--VAYAKETQHEKILRGLAVGISFIMYGQLEN 800
+ V + +G+ + + E D+ V Y + + + GLA+G+ + G ++
Sbjct: 572 EEVIQHGGALGLGVAGMATGDEGIYDDLRNVLYTDSALNGEAV-GLAMGLVMLGTGNMKV 630
Query: 801 ADDLVRDLCE-EKDAILRRSGMYTIAMAYCGSGSNVATKRLLH------DAILRRSGMYT 853
+D+++ + + + I+R G+ + MA G A L++ D LR G+ T
Sbjct: 631 LEDMIQYAHDTQHEKIVR--GL-AMGMALIMYGRQEAADELINGLLGDPDPTLRYGGIMT 687
Query: 854 IAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILF 895
IA+AYCG+ SN A ++LLHVAVSDVNDDVRR AV +LGFILF
Sbjct: 688 IALAYCGTSSNKAVRKLLHVAVSDVNDDVRRVAVLSLGFILF 729
Score = 165 (63.1 bits), Expect = 1.8e-75, Sum P(2) = 1.8e-75
Identities = 35/94 (37%), Positives = 56/94 (59%)
Query: 43 LAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVA-GSA 101
+ M +Q R FR +IL+ ++ L + + PDY +A+C +YL++ + +L +LV G A
Sbjct: 280 ICMGVVQERGFRNEILKLILELLNEIPSPDYFAIAKCVVYLNEHSMASVILRQLVEKGDA 339
Query: 102 DDDLMAAQIGFDLYESATQAFLASVLQELKTCAP 135
+A QI FDLY+++TQ FL V QE+ P
Sbjct: 340 RSLAVAYQISFDLYDNSTQEFLQKVHQEISELVP 373
Score = 77 (32.2 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 36/179 (20%), Positives = 76/179 (42%)
Query: 728 RDDIYEQLKFNLYQDDAVTGEAAGI-AMGLVLLGSKSESAIQDMVAYAKETQHEKILRGL 786
R + ++L L D T GI + L G+ S A++ ++ A ++ + R
Sbjct: 661 RQEAADELINGLLGDPDPTLRYGGIMTIALAYCGTSSNKAVRKLLHVAVSDVNDDVRRVA 720
Query: 787 AVGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRL---LHD 843
+ + FI++ + ++ +V L E + +R + ++ G+G + A L L D
Sbjct: 721 VLSLGFILFRKHQSVPRMVELLSESYNPHVRYGAAMALGISCAGTGLDEAIDLLEPMLKD 780
Query: 844 A--ILRRSGMYTIAMAYCGSGSNV-----ATKRLLHVAVSDVNDDVRRE--AVTALGFI 893
+ +R+ + +AM + + ++ + VSD ++D + ALG I
Sbjct: 781 STDFVRQGALIALAMVLVQQNEAMNPRVSSLRKTMMKMVSDRHEDAMAKFGCAIALGII 839
Score = 70 (29.7 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 42/190 (22%), Positives = 82/190 (43%)
Query: 247 IANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGV--IHRGHETEALAHMQSYLP 304
+A + GT + + L D +++ A T K+ ++G+ I G + EA + + L
Sbjct: 616 LAMGLVMLGTGNMKVLEDMIQY-AHDTQHEKIVRGLAMGMALIMYGRQ-EAADELINGLL 673
Query: 305 RETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQVKDATNEDDAVTGEAAGIAMGLVL 364
+ PT +++ AV L V D N+D A +++G +L
Sbjct: 674 GDPDPTLRYGGIMTIALAYCGTSSNKAV-RKLLHVAVSDV-NDD---VRRVAVLSLGFIL 728
Query: 365 LGSKSESAIQDMVAYAKETQHEKILRG--LAVGISFIMYGQLENADDLVRDLCEEKDAIL 422
+ ++ MV E+ + + G +A+GIS G L+ A DL+ + ++ +
Sbjct: 729 F--RKHQSVPRMVELLSESYNPHVRYGAAMALGISCAGTG-LDEAIDLLEPMLKDSTDFV 785
Query: 423 RRSGMYTIAM 432
R+ + +AM
Sbjct: 786 RQGALIALAM 795
Score = 63 (27.2 bits), Expect = 1.0e-64, Sum P(2) = 1.0e-64
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 519 GVISLLDDPMIELKEFSLKKLNDIVDDFWPE 549
G++ L +P ELK F+L+ L+ +D W E
Sbjct: 9 GLVGFLSEPDSELKVFALQTLDSQIDLLWTE 39
Score = 55 (24.4 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 17/80 (21%), Positives = 38/80 (47%)
Query: 358 IAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQLENADDLVRDLCEE 417
+ + L G+ S A++ ++ A ++ + R + + FI++ + ++ +V L E
Sbjct: 686 MTIALAYCGTSSNKAVRKLLHVAVSDVNDDVRRVAVLSLGFILFRKHQSVPRMVELLSES 745
Query: 418 KDAILRRSGMYTIAMAYCVS 437
+ +R Y AMA +S
Sbjct: 746 YNPHVR----YGAAMALGIS 761
Score = 39 (18.8 bits), Expect = 3.4e-62, Sum P(2) = 3.4e-62
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 431 AMAYCVSYLYFDLFSDLTYRIVKNRSGMYTIAMAY 465
A+A CV YL + + R + + ++A+AY
Sbjct: 312 AIAKCVVYLNEHSMASVILRQLVEKGDARSLAVAY 346
>TAIR|locus:2010672 [details] [associations]
symbol:AT1G04810 species:3702 "Arabidopsis thaliana"
[GO:0000502 "proteasome complex" evidence=IEA;IDA] [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=ISS;TAS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0030163 "protein catabolic
process" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006094 "gluconeogenesis"
evidence=RCA] [GO:0006302 "double-strand break repair"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0007010 "cytoskeleton organization" evidence=RCA] [GO:0009407
"toxin catabolic process" evidence=RCA] [GO:0010332 "response to
gamma radiation" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] [GO:0080129
"proteasome core complex assembly" evidence=RCA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
EMBL:CP002684 GO:GO:0005829 GO:GO:0005886 GO:GO:0005634
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0030163 GO:GO:0000502 GO:GO:0042176
EMBL:AC004809 HOGENOM:HOG000189403 KO:K03032 OMA:CVENAEL
Pfam:PF01851 ProtClustDB:CLSN2681948 EMBL:BT004007 IPI:IPI00520284
PIR:C86181 RefSeq:NP_171973.1 UniGene:At.19689
ProteinModelPortal:Q9MAT0 SMR:Q9MAT0 IntAct:Q9MAT0 STRING:Q9MAT0
PRIDE:Q9MAT0 ProMEX:Q9MAT0 EnsemblPlants:AT1G04810.1 GeneID:839409
KEGG:ath:AT1G04810 TAIR:At1g04810 InParanoid:Q9MAT0
PhylomeDB:Q9MAT0 ArrayExpress:Q9MAT0 Genevestigator:Q9MAT0
Uniprot:Q9MAT0
Length = 1001
Score = 707 (253.9 bits), Expect = 6.5e-75, Sum P(2) = 6.5e-75
Identities = 152/343 (44%), Positives = 212/343 (61%)
Query: 559 RITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESI--RVSICHTATIIANAFMHS 616
R+TK ILSGE SI L LQFL NK+D+LILK K+S+ R S+CH+ATI ANA MH+
Sbjct: 328 RLTKAKGILSGETSIQLTLQFLYSHNKSDLLILKTIKQSVEMRNSVCHSATIYANAIMHA 387
Query: 617 GTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPR--ETGPTSX 674
GTT D FLR+NL+WL+RATNWAK +ATA LGVIHRGH + + M YLP+ G S
Sbjct: 388 GTTVDTFLRENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPYLPQGGAGGGGSP 447
Query: 675 XXXXXXXXXXXXIHANHGAVINDYLLGQVKDATNEMVRHXXXXXXXXXXXXXXRDDIYEQ 734
IHANHG I +L ++ + E+++H +DIY+
Sbjct: 448 YSEGGALYALGLIHANHGEGIKQFLRDSLRSTSVEVIQHGACLGLGLAALGTADEDIYDD 507
Query: 735 LKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIM 794
+K LY D AV GEAAGI+MGL+L+G+ ++ A +M+AYA ETQHEKI+RGLA+GI+ +
Sbjct: 508 IKSVLYTDSAVAGEAAGISMGLLLVGTATDKA-SEMLAYAHETQHEKIIRGLALGIALTV 566
Query: 795 YGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAI------LRR 848
YG+ E AD L+ + ++D I+R GMY +A+AY G+ +N A ++LLH A+ +RR
Sbjct: 567 YGREEGADTLIEQMTRDQDPIIRYGGMYALALAYSGTANNKAIRQLLHFAVSDVSDDVRR 626
Query: 849 SGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALG 891
+ + +A+ + T R++ + N VR A A+G
Sbjct: 627 TAV--LALGFVLYSDPEQTPRIVSLLSESYNPHVRYGAALAVG 667
Score = 687 (246.9 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 189/510 (37%), Positives = 267/510 (52%)
Query: 31 VHSALKSCVPWCLAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVA 90
V L C+ ++ S + R +R ++LR LV +Y L+ PDY+++ QC ++LD+P+ VA
Sbjct: 177 VQGTLSYCIN--VSHSFVNQREYRHEVLRLLVNVYQKLASPDYLSICQCLMFLDEPQGVA 234
Query: 91 NLLGKLVAG-SADDDLMAAQIGFDLYESATQAFLASVLQELKTCAPIPDATHVVVKVPVX 149
++L KL+ + DD L+A QI FDL ++ QAFL SV L P P V +
Sbjct: 235 SILEKLLRSENKDDALLAFQISFDLVQNEHQAFLMSVRDRL----PAPKTRPVEA---IQ 287
Query: 150 XXXXXXXXXXXXXXXXXXXXSGPSSTTPGPETKTLESLNEKEKQLQARITKLSKILSGEV 209
PS T ET ++++ + R+TK ILSGE
Sbjct: 288 AVETSTAQNENTAGDVQMADETPSQTIVH-ETDPVDAVYAE------RLTKAKGILSGET 340
Query: 210 SIDLHLQFLIRSNKTDMLILKNTKESI--RVSICHTATIIANAFMHSGTTSDQFLRDNLE 267
SI L LQFL NK+D+LILK K+S+ R S+CH+ATI ANA MH+GTT D FLR+NL+
Sbjct: 341 SIQLTLQFLYSHNKSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLD 400
Query: 268 WLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPR--ETGPTSXXXXXXXXXXXXXI 325
WL+RATNWAK +ATA LGVIHRGH + + M YLP+ G S I
Sbjct: 401 WLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPYLPQGGAGGGGSPYSEGGALYALGLI 460
Query: 326 HANHGAVINDYLLGQVKDATNEDDAVTGEAAGIAMGLVLLGSKSESAIQDM--VAYAKET 383
HANHG I +L ++ + E V A + +GL LG+ E D+ V Y
Sbjct: 461 HANHGEGIKQFLRDSLRSTSVE---VIQHGACLGLGLAALGTADEDIYDDIKSVLYT--- 514
Query: 384 QHEKILRGLAVGISF--IMYGQL-ENADDLVRDLCE-EKDAILRRSGMYTIAMAYCVSYL 439
+ + G A GIS ++ G + A +++ E + + I+R + Y
Sbjct: 515 --DSAVAGEAAGISMGLLLVGTATDKASEMLAYAHETQHEKIIRGLALGIALTVYGREEG 572
Query: 440 YFDLFSDLTYR---IVKNRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTA 496
L +T I++ GMY +A+AY G+ +N A ++LLH AVSDV+DDVRR AV A
Sbjct: 573 ADTLIEQMTRDQDPIIRY-GGMYALALAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLA 631
Query: 497 LGFILFRTLFYVAPACTRSPWPGVISLLDD 526
LGF+L Y P T P ++SLL +
Sbjct: 632 LGFVL-----YSDPEQT----PRIVSLLSE 652
Score = 193 (73.0 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 55/160 (34%), Positives = 85/160 (53%)
Query: 745 VTGEAAGIAMGLVLLGSKSESAIQDM--VAYAKETQHEKILRGLAVGISF--IMYGQL-E 799
V A + +GL LG+ E D+ V Y + + G A GIS ++ G +
Sbjct: 483 VIQHGACLGLGLAALGTADEDIYDDIKSVLYT-----DSAVAGEAAGISMGLLLVGTATD 537
Query: 800 NADDLVRDLCEEKDAILRRSGMYTIAMAYCG--SGSNVATKRLLHDA--ILRRSGMYTIA 855
A +++ E + + R IA+ G G++ +++ D I+R GMY +A
Sbjct: 538 KASEMLAYAHETQHEKIIRGLALGIALTVYGREEGADTLIEQMTRDQDPIIRYGGMYALA 597
Query: 856 MAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILF 895
+AY G+ +N A ++LLH AVSDV+DDVRR AV ALGF+L+
Sbjct: 598 LAYSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLY 637
Score = 69 (29.3 bits), Expect = 6.5e-75, Sum P(2) = 6.5e-75
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 519 GVISLLDDPMIELKEFSLKKLNDIVDDFWPE 549
G++++L++P LK +L L +VD FWPE
Sbjct: 11 GLLAMLNEPHPSLKLHALSYLIRLVDQFWPE 41
>CGD|CAL0003585 [details] [associations]
symbol:RPN2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0034515 "proteasome storage granule"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] [GO:0004175 "endopeptidase activity"
evidence=IEA] [GO:0030674 "protein binding, bridging" evidence=IEA]
[GO:0043248 "proteasome assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
CGD:CAL0003585 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 EMBL:AACQ01000070 EMBL:AACQ01000071 eggNOG:COG5116
KO:K03032 Pfam:PF01851 RefSeq:XP_716329.1 RefSeq:XP_716391.1
ProteinModelPortal:Q5A3L0 STRING:Q5A3L0 GeneID:3641945
GeneID:3642027 KEGG:cal:CaO19.12725 KEGG:cal:CaO19.5260
Uniprot:Q5A3L0
Length = 952
Score = 600 (216.3 bits), Expect = 8.1e-64, Sum P(2) = 8.1e-64
Identities = 141/377 (37%), Positives = 209/377 (55%)
Query: 530 ELKEFSLKKLNDIVDDFWPENEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSNKTDML 589
+L + ++L D+V + N KE + + K+ ILSG + DL FL ++N D+
Sbjct: 255 DLVNAASQELLDLVMEKL-SNAKESE-NGTLKKILNILSGVPTCDLDNTFLFKNNNADIT 312
Query: 590 ILKNTKESI--RVSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLG 647
IL TK + R SI H+A ANAFMH+GTT D F R NLEWL RATNW+K +ATA+LG
Sbjct: 313 ILNKTKNLLDGRSSIFHSAVTFANAFMHAGTTDDSFFRKNLEWLGRATNWSKFSATAALG 372
Query: 648 VIHRGHETEALAHMQSYLPRETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQVKDAT 707
VIH+G+ ++ ++ YLP +G S I A HG + L + D
Sbjct: 373 VIHKGNLSQGRTILKPYLPGSSG--SANNKGGSLFALGLIFAGHGREVIGTLKSFIDDNG 430
Query: 708 N-------EMVRHXXXXXXXXXXXXXXRDDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLG 760
N ++ H + +YE LK LY D A++ +AA + MGLV+LG
Sbjct: 431 NAAGSNDIDIQLHGAALGAGVAGMGSKSESLYESLKVVLYSDSAISSQAAALGMGLVMLG 490
Query: 761 SKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQLENADDLVRDLCEEKDAILRRSG 820
S +E AI+DM+ YA ETQHE I+RGLA+GI+ + YG+ E AD+++ L ++ +ILR G
Sbjct: 491 SGNEEAIKDMLTYALETQHENIIRGLAIGIALLSYGREEKADEIIDQLMNQESSILRYGG 550
Query: 821 MYTIAMAYCGSGSNVATKRLLHDAI------LRRSGMYTIAMAYCGSGSNVATKRLLHVA 874
+TIA+AY G+G+N A K+LLH A+ +RR+ + +++ + A +++ +
Sbjct: 551 AFTIALAYAGTGNNNAIKKLLHFAVSDPSDDVRRASV--LSLGFLLIRDYTAAPQIVKLL 608
Query: 875 VSDVNDDVRREAVTALG 891
N VR ALG
Sbjct: 609 SQSHNPHVRYGTALALG 625
Score = 461 (167.3 bits), Expect = 2.0e-46, Sum P(2) = 2.0e-46
Identities = 117/337 (34%), Positives = 176/337 (52%)
Query: 184 LESLNEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESI--RVSIC 241
+E L+ ++ + K+ ILSG + DL FL ++N D+ IL TK + R SI
Sbjct: 269 MEKLSNAKESENGTLKKILNILSGVPTCDLDNTFLFKNNNADITILNKTKNLLDGRSSIF 328
Query: 242 HTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQS 301
H+A ANAFMH+GTT D F R NLEWL RATNW+K +ATA+LGVIH+G+ ++ ++
Sbjct: 329 HSAVTFANAFMHAGTTDDSFFRKNLEWLGRATNWSKFSATAALGVIHKGNLSQGRTILKP 388
Query: 302 YLPRETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQVKD----ATNEDDAVTGEAAG 357
YLP +G S I A HG + L + D A + D + A
Sbjct: 389 YLPGSSG--SANNKGGSLFALGLIFAGHGREVIGTLKSFIDDNGNAAGSNDIDIQLHGAA 446
Query: 358 IAMGLVLLGSKSESAIQDM-VAYAKETQHEKILRGLAVGISFIMYGQLENADDLVRDLCE 416
+ G+ +GSKSES + + V ++ L +G+ + G E D++ E
Sbjct: 447 LGAGVAGMGSKSESLYESLKVVLYSDSAISSQAAALGMGLVMLGSGNEEAIKDMLTYALE 506
Query: 417 -EKDAILRRSGMYTIAMAYCVSYLYFDLFSDLTYR--IVKNRSGMYTIAMAYCGSGSNVA 473
+ + I+R + ++Y ++ L + + G +TIA+AY G+G+N A
Sbjct: 507 TQHENIIRGLAIGIALLSYGREEKADEIIDQLMNQESSILRYGGAFTIALAYAGTGNNNA 566
Query: 474 TKRLLHVAVSDVNDDVRREAVTALGFILFRTLFYVAP 510
K+LLH AVSD +DDVRR +V +LGF+L R + AP
Sbjct: 567 IKKLLHFAVSDPSDDVRRASVLSLGFLLIRD-YTAAP 602
Score = 186 (70.5 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 51/150 (34%), Positives = 81/150 (54%)
Query: 750 AGIAMGLVLLGSKSESAIQDM-VAYAKETQHEKILRGLAVGISFIMYGQLENADDLVRDL 808
A + G+ +GSKSES + + V ++ L +G+ + G E D++
Sbjct: 445 AALGAGVAGMGSKSESLYESLKVVLYSDSAISSQAAALGMGLVMLGSGNEEAIKDMLTYA 504
Query: 809 CEEKDAILRRSGMYTIAMAYCG--SGSNVATKRLLHD--AILRRSGMYTIAMAYCGSGSN 864
E + + R IA+ G ++ +L++ +ILR G +TIA+AY G+G+N
Sbjct: 505 LETQHENIIRGLAIGIALLSYGREEKADEIIDQLMNQESSILRYGGAFTIALAYAGTGNN 564
Query: 865 VATKRLLHVAVSDVNDDVRREAVTALGFIL 894
A K+LLH AVSD +DDVRR +V +LGF+L
Sbjct: 565 NAIKKLLHFAVSDPSDDVRRASVLSLGFLL 594
Score = 105 (42.0 bits), Expect = 8.1e-64, Sum P(2) = 8.1e-64
Identities = 26/96 (27%), Positives = 51/96 (53%)
Query: 46 SSIQSRSFRAQILRTLVRLYHSLSV-PDYVNMAQCWIYLDDPRSVANLLGKLVAGSADDD 104
+++ + +FR Q+L +L+ L SL D+ + + + L+D L +L+ + ++D
Sbjct: 189 NTVSNTNFRVQVLNSLISLLLSLKKHQDFFTIIKIIVQLNDSELAVKLFQELI--NQNED 246
Query: 105 LMAAQIGFDLYESATQAFLASVLQELKTCAPIPDAT 140
L+A Q FDL +A+Q L V+++L + T
Sbjct: 247 LIAYQAAFDLVNAASQELLDLVMEKLSNAKESENGT 282
Score = 68 (29.0 bits), Expect = 6.4e-60, Sum P(2) = 6.4e-60
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 521 ISLLDDPMIELKEFSLKKLNDIVDDFWPE 549
++LL +P LK ++L LN +VD W E
Sbjct: 10 LALLGEPDSTLKSYALSSLNQVVDQLWAE 38
>SGD|S000001337 [details] [associations]
symbol:RPN2 "Subunit of the 26S proteasome" species:4932
"Saccharomyces cerevisiae" [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IMP;IPI] [GO:0034515 "proteasome
storage granule" evidence=IDA] [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0004175 "endopeptidase activity"
evidence=IMP] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043248 "proteasome
assembly" evidence=IGI] [GO:0050790 "regulation of catalytic
activity" evidence=IEA] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 SGD:S000001337 INTERPRO:IPR002015 GO:GO:0005634
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:BK006942 GO:GO:0050790 GO:GO:0043248 GO:GO:0006511 EMBL:Z37997
GO:GO:0042176 GO:GO:0034515 GO:GO:0008540 PDB:4B4T PDBsum:4B4T
eggNOG:COG5116 GeneTree:ENSGT00550000074915 HOGENOM:HOG000189403
KO:K03032 OMA:CVENAEL Pfam:PF01851 OrthoDB:EOG4KD9V5 EMBL:L06321
PIR:S48369 RefSeq:NP_012190.1 PDB:4ADY PDBsum:4ADY
ProteinModelPortal:P32565 SMR:P32565 DIP:DIP-4638N IntAct:P32565
MINT:MINT-539880 STRING:P32565 PaxDb:P32565 PeptideAtlas:P32565
EnsemblFungi:YIL075C GeneID:854735 KEGG:sce:YIL075C NextBio:977437
Genevestigator:P32565 GermOnline:YIL075C Uniprot:P32565
Length = 945
Score = 541 (195.5 bits), Expect = 2.0e-55, Sum P(2) = 2.0e-55
Identities = 130/344 (37%), Positives = 182/344 (52%)
Query: 563 LSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESI--RVSICHTATIIANAFMHSGTTS 620
L ILSG + D + FL+ + D+ +L +K S+ + S+ HTA +AN FMH+GTT
Sbjct: 286 LLNILSGLPTCDYYNTFLLNNKNIDIGLLNKSKSSLDGKFSLFHTAVSVANGFMHAGTTD 345
Query: 621 DQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRETGPTSXXXXXXX 680
+ F++ NL WL +A NWAK TATASLGVIH+G+ E M YLP +S
Sbjct: 346 NSFIKANLPWLGKAQNWAKFTATASLGVIHKGNLLEGKKVMAPYLPGSRA-SSRFIKGGS 404
Query: 681 XXXXXXIHANHGAVINDYLL-------GQVKDATNEMVRHXXXXXXXXXXXXXXRDDIYE 733
I+A G DYL G D +++ H ++YE
Sbjct: 405 LYGLGLIYAGFGRDTTDYLKNIIVENSGTSGDEDVDVLLHGASLGIGLAAMGSANIEVYE 464
Query: 734 QLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFI 793
LK LY D A +GEAA + MGL +LG+ AI DM Y++ETQH I RGLAVG++ I
Sbjct: 465 ALKEVLYNDSATSGEAAALGMGLCMLGTGKPEAIHDMFTYSQETQHGNITRGLAVGLALI 524
Query: 794 MYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATKRLLHDAI------LR 847
YG+ E ADDL+ + +++LR G +TIA+AY G+G+N A KRLLH A+ +R
Sbjct: 525 NYGRQELADDLITKMLASDESLLRYGGAFTIALAYAGTGNNSAVKRLLHVAVSDSNDDVR 584
Query: 848 RSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALG 891
R+ + IA+ + R++ + N VR ALG
Sbjct: 585 RAAV--IALGFVLLRDYTTVPRIVQLLSKSHNAHVRCGTAFALG 626
Score = 433 (157.5 bits), Expect = 7.7e-43, Sum P(2) = 7.7e-43
Identities = 117/318 (36%), Positives = 170/318 (53%)
Query: 201 LSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESI--RVSICHTATIIANAFMHSGTTS 258
L ILSG + D + FL+ + D+ +L +K S+ + S+ HTA +AN FMH+GTT
Sbjct: 286 LLNILSGLPTCDYYNTFLLNNKNIDIGLLNKSKSSLDGKFSLFHTAVSVANGFMHAGTTD 345
Query: 259 DQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRETGPTSXXXXXXX 318
+ F++ NL WL +A NWAK TATASLGVIH+G+ E M YLP +S
Sbjct: 346 NSFIKANLPWLGKAQNWAKFTATASLGVIHKGNLLEGKKVMAPYLPGSRA-SSRFIKGGS 404
Query: 319 XXXXXXIHANHGAVINDYLLGQVKDAT----NEDDAVTGEAAGIAMGLVLLGSKS---ES 371
I+A G DYL + + + +ED V A + +GL +GS +
Sbjct: 405 LYGLGLIYAGFGRDTTDYLKNIIVENSGTSGDEDVDVLLHGASLGIGLAAMGSANIEVYE 464
Query: 372 AIQDMVAYAKETQHEKILRGLAVGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIA 431
A+++++ T E G+ G+ + G+ E D+ E + + R G+ +
Sbjct: 465 ALKEVLYNDSATSGEAAALGM--GLCMLGTGKPEAIHDMFTYSQETQHGNITR-GL-AVG 520
Query: 432 MAYCVSYLYFDLFSDL-TYRIVKNRS-----GMYTIAMAYCGSGSNVATKRLLHVAVSDV 485
+A ++Y +L DL T + + S G +TIA+AY G+G+N A KRLLHVAVSD
Sbjct: 521 LAL-INYGRQELADDLITKMLASDESLLRYGGAFTIALAYAGTGNNSAVKRLLHVAVSDS 579
Query: 486 NDDVRREAVTALGFILFR 503
NDDVRR AV ALGF+L R
Sbjct: 580 NDDVRRAAVIALGFVLLR 597
Score = 206 (77.6 bits), Expect = 7.5e-18, Sum P(2) = 7.5e-18
Identities = 59/161 (36%), Positives = 87/161 (54%)
Query: 741 QDDAVTGEAAGIAMGLVLLGSKS-E--SAIQDMVAYAKETQHEKILRGLAVGISFIMYGQ 797
+D V A + +GL +GS + E A+++++ T E G+ G+ + G+
Sbjct: 437 EDVDVLLHGASLGIGLAAMGSANIEVYEALKEVLYNDSATSGEAAALGM--GLCMLGTGK 494
Query: 798 LENADDLVRDLCEEKDAILRRSGMYTIAMAYCGS---GSNVATKRLLHD-AILRRSGMYT 853
E D+ E + + R +A+ G ++ TK L D ++LR G +T
Sbjct: 495 PEAIHDMFTYSQETQHGNITRGLAVGLALINYGRQELADDLITKMLASDESLLRYGGAFT 554
Query: 854 IAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFIL 894
IA+AY G+G+N A KRLLHVAVSD NDDVRR AV ALGF+L
Sbjct: 555 IALAYAGTGNNSAVKRLLHVAVSDSNDDVRRAAVIALGFVL 595
Score = 101 (40.6 bits), Expect = 2.0e-55, Sum P(2) = 2.0e-55
Identities = 29/105 (27%), Positives = 53/105 (50%)
Query: 43 LAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSAD 102
LA++++ + FR+ ILR ++ DY+ + + + L+D L KL +
Sbjct: 192 LAITTVTNSKFRSSILRKSFDFLMNMPNCDYLTLNKVVVNLNDAGLALQLFKKLK--EEN 249
Query: 103 DDLMAAQIGFDLYESATQAFLASVLQELKTCAPIPDATHVVVKVP 147
D+ ++AQI FDL SA+Q L ++ EL P +++ +P
Sbjct: 250 DEGLSAQIAFDLVSSASQQLLEILVTELTAQGYDPALLNILSGLP 294
Score = 74 (31.1 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 24/133 (18%), Positives = 58/133 (43%)
Query: 729 DDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAV 788
DD+ ++ L D+++ + L G+ + SA++ ++ A ++ + R +
Sbjct: 533 DDLITKM---LASDESLLRYGGAFTIALAYAGTGNNSAVKRLLHVAVSDSNDDVRRAAVI 589
Query: 789 GISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSGSNVATK---RLLHDAI 845
+ F++ +V+ L + +A +R + + +A G G A L D +
Sbjct: 590 ALGFVLLRDYTTVPRIVQLLSKSHNAHVRCGTAFALGIACAGKGLQSAIDVLDPLTKDPV 649
Query: 846 --LRRSGMYTIAM 856
+R++ M ++M
Sbjct: 650 DFVRQAAMIALSM 662
Score = 60 (26.2 bits), Expect = 4.1e-51, Sum P(2) = 4.1e-51
Identities = 10/34 (29%), Positives = 21/34 (61%)
Query: 520 VISLLDDPMIELKEFSLKKLNDIVDDFWPENEKE 553
+++LL + +K ++L+ +N++VD W E E
Sbjct: 9 LLALLRENQDSVKTYALESINNVVDQLWSEISNE 42
>WB|WBGene00004459 [details] [associations]
symbol:rpn-2 species:6239 "Caenorhabditis elegans"
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0072686 "mitotic
spindle" evidence=IDA] [GO:0005938 "cell cortex" evidence=IDA]
[GO:0031965 "nuclear membrane" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0005886 GO:GO:0005938 GO:GO:0008340
GO:GO:0009792 GO:GO:0006915 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0002119 GO:GO:0031965
GO:GO:0000003 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GO:GO:0072686 EMBL:FO080630 RefSeq:NP_498346.2 RefSeq:NP_498347.3
ProteinModelPortal:Q18115 SMR:Q18115 IntAct:Q18115 MINT:MINT-210658
STRING:Q18115 PaxDb:Q18115 PRIDE:Q18115 EnsemblMetazoa:C23G10.4b.1
EnsemblMetazoa:C23G10.4b.2 EnsemblMetazoa:C23G10.4b.3 GeneID:175877
KEGG:cel:CELE_C23G10.4 UCSC:C23G10.4a.1 CTD:175877
WormBase:C23G10.4a WormBase:C23G10.4b eggNOG:COG5116
GeneTree:ENSGT00550000074915 HOGENOM:HOG000189403 InParanoid:Q18115
KO:K03032 OMA:CVENAEL NextBio:890112 Pfam:PF01851 Uniprot:Q18115
Length = 965
Score = 495 (179.3 bits), Expect = 9.0e-54, Sum P(2) = 9.0e-54
Identities = 113/347 (32%), Positives = 180/347 (51%)
Query: 551 EKEKQLQARITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSICHTATIIA 610
+++ + + + K+ IL G ++ +L F +R N TD ++++ KE+IR + H A +I+
Sbjct: 290 QQDARDEKSMEKIHSILKGHETVKAYLDFFVRHNHTDSVLMEEIKENIRTASAHNALLIS 349
Query: 611 NAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRETG 670
N M GTT D FLR+NL W+++ATNW K A ASLG+IH G E+ A+ ++ YLP+E+
Sbjct: 350 NGLMQYGTTCDDFLRNNLNWVSKATNWNKFNAVASLGLIHHGQESSAMKVLEPYLPKESV 409
Query: 671 PTSXXXXXXXXXXXXXIHANHGAVINDYLLGQ-VKDATNEMVRHXXXXXXXXXXXXXXRD 729
IHA HG L Q +K A NE VRH
Sbjct: 410 EGFGFKEGGAMLAYGLIHAKHGDATAMSTLAQWLKTAENEPVRHGACLGFGVAGLGSSSV 469
Query: 730 DIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVG 789
YE+++ L +D+AV+GE+AGIAMGL++ G ++ ++ Y +TQH+K RG+ G
Sbjct: 470 SNYEKVREVLQRDEAVSGESAGIAMGLIMAGHLNQEVFNELKQYTVDTQHDKTQRGIRTG 529
Query: 790 ISFIMYGQLENADDLVRDLCEEK-DAILRRSGMYTIAMAYCGSGSNVATKRLLH----DA 844
++ +G +A+ +++ K + +LR +G+ ++MAY G+GS +RLL D
Sbjct: 530 LACAAFGLQGDAEPYIKEAIGAKSNPMLRSTGICMLSMAYAGTGSPDVVRRLLEKVATDP 589
Query: 845 ILRRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALG 891
L TI + + S + + N VR A ALG
Sbjct: 590 NLDVKRYATIGIGFVLSKDPSTCLSYVAMLTEHFNGHVRYGAAMALG 636
Score = 382 (139.5 bits), Expect = 5.8e-41, Sum P(2) = 5.8e-41
Identities = 111/344 (32%), Positives = 176/344 (51%)
Query: 182 KTLESLNEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSIC 241
+ L+ +++ + + + K+ IL G ++ +L F +R N TD ++++ KE+IR +
Sbjct: 283 RVLKRFQQQDARDEKSMEKIHSILKGHETVKAYLDFFVRHNHTDSVLMEEIKENIRTASA 342
Query: 242 HTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQS 301
H A +I+N M GTT D FLR+NL W+++ATNW K A ASLG+IH G E+ A+ ++
Sbjct: 343 HNALLISNGLMQYGTTCDDFLRNNLNWVSKATNWNKFNAVASLGLIHHGQESSAMKVLEP 402
Query: 302 YLPRETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQ-VKDATNEDDAVTGEAAGIAM 360
YLP+E+ IHA HG L Q +K A NE A +
Sbjct: 403 YLPKESVEGFGFKEGGAMLAYGLIHAKHGDATAMSTLAQWLKTAENEP---VRHGACLGF 459
Query: 361 GLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISF--IMYGQL--ENADDLVRDLCE 416
G+ LGS S S + + + Q ++ + G + GI+ IM G L E ++L + +
Sbjct: 460 GVAGLGSSSVSNYEKV---REVLQRDEAVSGESAGIAMGLIMAGHLNQEVFNELKQYTVD 516
Query: 417 EKDAILRRSGMYTIAMAYCVSY-LYFDLFSDLTYRI-VKN----RS-GMYTIAMAYCGSG 469
+ +R G+ T +A C ++ L D + I K+ RS G+ ++MAY G+G
Sbjct: 517 TQHDKTQR-GIRT-GLA-CAAFGLQGDAEPYIKEAIGAKSNPMLRSTGICMLSMAYAGTG 573
Query: 470 SNVATKRLLHVAVSDVNDDVRREAVTALGFILFRT----LFYVA 509
S +RLL +D N DV+R A +GF+L + L YVA
Sbjct: 574 SPDVVRRLLEKVATDPNLDVKRYATIGIGFVLSKDPSTCLSYVA 617
Score = 138 (53.6 bits), Expect = 9.0e-54, Sum P(2) = 9.0e-54
Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 51 RSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSADDDLMAAQI 110
RSFR Q++ T+++ Y PD + +C++ D+ + A+ + L+A S A QI
Sbjct: 211 RSFRFQVIDTVIKTYLKCPSPDMSKICECYVLTDNAEAAADTITSLIAKSLST--RAYQI 268
Query: 111 GFDLYESATQAFLASVLQELK 131
FDLYE+A+Q FL VL+ +
Sbjct: 269 AFDLYETASQGFLDRVLKRFQ 289
Score = 120 (47.3 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 44/154 (28%), Positives = 75/154 (48%)
Query: 750 AGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISF--IMYGQL--ENADDLV 805
A + G+ LGS S S + + + Q ++ + G + GI+ IM G L E ++L
Sbjct: 455 ACLGFGVAGLGSSSVSNYEKV---REVLQRDEAVSGESAGIAMGLIMAGHLNQEVFNELK 511
Query: 806 RDLCE-EKDAILR--RSGMYTIAMAYCGSGSNVATKRL--LHDAILRRSGMYTIAMAYCG 860
+ + + D R R+G+ A G + + + +LR +G+ ++MAY G
Sbjct: 512 QYTVDTQHDKTQRGIRTGLACAAFGLQGDAEPYIKEAIGAKSNPMLRSTGICMLSMAYAG 571
Query: 861 SGSNVATKRLLHVAVSDVNDDVRREAVTALGFIL 894
+GS +RLL +D N DV+R A +GF+L
Sbjct: 572 TGSPDVVRRLLEKVATDPNLDVKRYATIGIGFVL 605
Score = 79 (32.9 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 65/290 (22%), Positives = 108/290 (37%)
Query: 233 KESIR-VSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNW-AKLTATASLGVIHRG 290
KES+ ++A +H+ + +WL A N + A GV G
Sbjct: 406 KESVEGFGFKEGGAMLAYGLIHAKHGDATAMSTLAQWLKTAENEPVRHGACLGFGVAGLG 465
Query: 291 HETEA-LAHMQSYLPRETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQVKDATNEDD 349
+ + ++ L R+ S H N V N+ L Q T D
Sbjct: 466 SSSVSNYEKVREVLQRDEA-VSGESAGIAMGLIMAGHLNQ-EVFNE--LKQYTVDTQHDK 521
Query: 350 AVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQLENADD 409
G G+A L +E I++ + AK +LR + + + Y + D
Sbjct: 522 TQRGIRTGLACAAFGLQGDAEPYIKEAIG-AKSNP---MLRSTGICMLSMAYAGT-GSPD 576
Query: 410 LVRDLCEE--KDAILRRSGMYTIAMAYCVSYLYFDLFSDLTY--RIVKNRSG--MYTIAM 463
+VR L E+ D L TI + + +S D + L+Y + ++ +G Y AM
Sbjct: 577 VVRRLLEKVATDPNLDVKRYATIGIGFVLSK---DPSTCLSYVAMLTEHFNGHVRYGAAM 633
Query: 464 AY---CGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFRTLFYVAP 510
A C N+ L+ +SD VR+ A+ +L I+ + Y P
Sbjct: 634 ALGIACAGTGNMEAIALIEPMISDKEGFVRKGALLSLALIMCQQTDYTCP 683
Score = 55 (24.4 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 40/176 (22%), Positives = 71/176 (40%)
Query: 730 DIYEQLK---FNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGL 786
+++ +LK + D G G+A L +E I++ + AK +LR
Sbjct: 505 EVFNELKQYTVDTQHDKTQRGIRTGLACAAFGLQGDAEPYIKEAIG-AKSNP---MLRST 560
Query: 787 AVGISFIMYGQLENADDLVRDLCEE--KDAILRRSGMYTIAMAYCGSG------SNVATK 838
+ + + Y + D+VR L E+ D L TI + + S S VA
Sbjct: 561 GICMLSMAYAGT-GSPDVVRRLLEKVATDPNLDVKRYATIGIGFVLSKDPSTCLSYVAML 619
Query: 839 RLLHDAILRRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFIL 894
+ +R + +A G+G N+ L+ +SD VR+ A+ +L I+
Sbjct: 620 TEHFNGHVRYGAAMALGIACAGTG-NMEAIALIEPMISDKEGFVRKGALLSLALIM 674
>UNIPROTKB|Q18115 [details] [associations]
symbol:rpn-2 "26S proteasome non-ATPase regulatory subunit
1" species:6239 "Caenorhabditis elegans" [GO:0000502 "proteasome
complex" evidence=NAS] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 INTERPRO:IPR002015 GO:GO:0005886 GO:GO:0005938
GO:GO:0008340 GO:GO:0009792 GO:GO:0006915 GO:GO:0030234
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0002119
GO:GO:0031965 GO:GO:0000003 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 GO:GO:0072686 EMBL:FO080630 RefSeq:NP_498346.2
RefSeq:NP_498347.3 ProteinModelPortal:Q18115 SMR:Q18115
IntAct:Q18115 MINT:MINT-210658 STRING:Q18115 PaxDb:Q18115
PRIDE:Q18115 EnsemblMetazoa:C23G10.4b.1 EnsemblMetazoa:C23G10.4b.2
EnsemblMetazoa:C23G10.4b.3 GeneID:175877 KEGG:cel:CELE_C23G10.4
UCSC:C23G10.4a.1 CTD:175877 WormBase:C23G10.4a WormBase:C23G10.4b
eggNOG:COG5116 GeneTree:ENSGT00550000074915 HOGENOM:HOG000189403
InParanoid:Q18115 KO:K03032 OMA:CVENAEL NextBio:890112 Pfam:PF01851
Uniprot:Q18115
Length = 965
Score = 495 (179.3 bits), Expect = 9.0e-54, Sum P(2) = 9.0e-54
Identities = 113/347 (32%), Positives = 180/347 (51%)
Query: 551 EKEKQLQARITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSICHTATIIA 610
+++ + + + K+ IL G ++ +L F +R N TD ++++ KE+IR + H A +I+
Sbjct: 290 QQDARDEKSMEKIHSILKGHETVKAYLDFFVRHNHTDSVLMEEIKENIRTASAHNALLIS 349
Query: 611 NAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRETG 670
N M GTT D FLR+NL W+++ATNW K A ASLG+IH G E+ A+ ++ YLP+E+
Sbjct: 350 NGLMQYGTTCDDFLRNNLNWVSKATNWNKFNAVASLGLIHHGQESSAMKVLEPYLPKESV 409
Query: 671 PTSXXXXXXXXXXXXXIHANHGAVINDYLLGQ-VKDATNEMVRHXXXXXXXXXXXXXXRD 729
IHA HG L Q +K A NE VRH
Sbjct: 410 EGFGFKEGGAMLAYGLIHAKHGDATAMSTLAQWLKTAENEPVRHGACLGFGVAGLGSSSV 469
Query: 730 DIYEQLKFNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVG 789
YE+++ L +D+AV+GE+AGIAMGL++ G ++ ++ Y +TQH+K RG+ G
Sbjct: 470 SNYEKVREVLQRDEAVSGESAGIAMGLIMAGHLNQEVFNELKQYTVDTQHDKTQRGIRTG 529
Query: 790 ISFIMYGQLENADDLVRDLCEEK-DAILRRSGMYTIAMAYCGSGSNVATKRLLH----DA 844
++ +G +A+ +++ K + +LR +G+ ++MAY G+GS +RLL D
Sbjct: 530 LACAAFGLQGDAEPYIKEAIGAKSNPMLRSTGICMLSMAYAGTGSPDVVRRLLEKVATDP 589
Query: 845 ILRRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALG 891
L TI + + S + + N VR A ALG
Sbjct: 590 NLDVKRYATIGIGFVLSKDPSTCLSYVAMLTEHFNGHVRYGAAMALG 636
Score = 382 (139.5 bits), Expect = 5.8e-41, Sum P(2) = 5.8e-41
Identities = 111/344 (32%), Positives = 176/344 (51%)
Query: 182 KTLESLNEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESIRVSIC 241
+ L+ +++ + + + K+ IL G ++ +L F +R N TD ++++ KE+IR +
Sbjct: 283 RVLKRFQQQDARDEKSMEKIHSILKGHETVKAYLDFFVRHNHTDSVLMEEIKENIRTASA 342
Query: 242 HTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQS 301
H A +I+N M GTT D FLR+NL W+++ATNW K A ASLG+IH G E+ A+ ++
Sbjct: 343 HNALLISNGLMQYGTTCDDFLRNNLNWVSKATNWNKFNAVASLGLIHHGQESSAMKVLEP 402
Query: 302 YLPRETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQ-VKDATNEDDAVTGEAAGIAM 360
YLP+E+ IHA HG L Q +K A NE A +
Sbjct: 403 YLPKESVEGFGFKEGGAMLAYGLIHAKHGDATAMSTLAQWLKTAENEP---VRHGACLGF 459
Query: 361 GLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISF--IMYGQL--ENADDLVRDLCE 416
G+ LGS S S + + + Q ++ + G + GI+ IM G L E ++L + +
Sbjct: 460 GVAGLGSSSVSNYEKV---REVLQRDEAVSGESAGIAMGLIMAGHLNQEVFNELKQYTVD 516
Query: 417 EKDAILRRSGMYTIAMAYCVSY-LYFDLFSDLTYRI-VKN----RS-GMYTIAMAYCGSG 469
+ +R G+ T +A C ++ L D + I K+ RS G+ ++MAY G+G
Sbjct: 517 TQHDKTQR-GIRT-GLA-CAAFGLQGDAEPYIKEAIGAKSNPMLRSTGICMLSMAYAGTG 573
Query: 470 SNVATKRLLHVAVSDVNDDVRREAVTALGFILFRT----LFYVA 509
S +RLL +D N DV+R A +GF+L + L YVA
Sbjct: 574 SPDVVRRLLEKVATDPNLDVKRYATIGIGFVLSKDPSTCLSYVA 617
Score = 138 (53.6 bits), Expect = 9.0e-54, Sum P(2) = 9.0e-54
Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 51 RSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPRSVANLLGKLVAGSADDDLMAAQI 110
RSFR Q++ T+++ Y PD + +C++ D+ + A+ + L+A S A QI
Sbjct: 211 RSFRFQVIDTVIKTYLKCPSPDMSKICECYVLTDNAEAAADTITSLIAKSLST--RAYQI 268
Query: 111 GFDLYESATQAFLASVLQELK 131
FDLYE+A+Q FL VL+ +
Sbjct: 269 AFDLYETASQGFLDRVLKRFQ 289
Score = 120 (47.3 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 44/154 (28%), Positives = 75/154 (48%)
Query: 750 AGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISF--IMYGQL--ENADDLV 805
A + G+ LGS S S + + + Q ++ + G + GI+ IM G L E ++L
Sbjct: 455 ACLGFGVAGLGSSSVSNYEKV---REVLQRDEAVSGESAGIAMGLIMAGHLNQEVFNELK 511
Query: 806 RDLCE-EKDAILR--RSGMYTIAMAYCGSGSNVATKRL--LHDAILRRSGMYTIAMAYCG 860
+ + + D R R+G+ A G + + + +LR +G+ ++MAY G
Sbjct: 512 QYTVDTQHDKTQRGIRTGLACAAFGLQGDAEPYIKEAIGAKSNPMLRSTGICMLSMAYAG 571
Query: 861 SGSNVATKRLLHVAVSDVNDDVRREAVTALGFIL 894
+GS +RLL +D N DV+R A +GF+L
Sbjct: 572 TGSPDVVRRLLEKVATDPNLDVKRYATIGIGFVL 605
Score = 79 (32.9 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 65/290 (22%), Positives = 108/290 (37%)
Query: 233 KESIR-VSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNW-AKLTATASLGVIHRG 290
KES+ ++A +H+ + +WL A N + A GV G
Sbjct: 406 KESVEGFGFKEGGAMLAYGLIHAKHGDATAMSTLAQWLKTAENEPVRHGACLGFGVAGLG 465
Query: 291 HETEA-LAHMQSYLPRETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQVKDATNEDD 349
+ + ++ L R+ S H N V N+ L Q T D
Sbjct: 466 SSSVSNYEKVREVLQRDEA-VSGESAGIAMGLIMAGHLNQ-EVFNE--LKQYTVDTQHDK 521
Query: 350 AVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQLENADD 409
G G+A L +E I++ + AK +LR + + + Y + D
Sbjct: 522 TQRGIRTGLACAAFGLQGDAEPYIKEAIG-AKSNP---MLRSTGICMLSMAYAGT-GSPD 576
Query: 410 LVRDLCEE--KDAILRRSGMYTIAMAYCVSYLYFDLFSDLTY--RIVKNRSG--MYTIAM 463
+VR L E+ D L TI + + +S D + L+Y + ++ +G Y AM
Sbjct: 577 VVRRLLEKVATDPNLDVKRYATIGIGFVLSK---DPSTCLSYVAMLTEHFNGHVRYGAAM 633
Query: 464 AY---CGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILFRTLFYVAP 510
A C N+ L+ +SD VR+ A+ +L I+ + Y P
Sbjct: 634 ALGIACAGTGNMEAIALIEPMISDKEGFVRKGALLSLALIMCQQTDYTCP 683
Score = 55 (24.4 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 40/176 (22%), Positives = 71/176 (40%)
Query: 730 DIYEQLK---FNLYQDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGL 786
+++ +LK + D G G+A L +E I++ + AK +LR
Sbjct: 505 EVFNELKQYTVDTQHDKTQRGIRTGLACAAFGLQGDAEPYIKEAIG-AKSNP---MLRST 560
Query: 787 AVGISFIMYGQLENADDLVRDLCEE--KDAILRRSGMYTIAMAYCGSG------SNVATK 838
+ + + Y + D+VR L E+ D L TI + + S S VA
Sbjct: 561 GICMLSMAYAGT-GSPDVVRRLLEKVATDPNLDVKRYATIGIGFVLSKDPSTCLSYVAML 619
Query: 839 RLLHDAILRRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFIL 894
+ +R + +A G+G N+ L+ +SD VR+ A+ +L I+
Sbjct: 620 TEHFNGHVRYGAAMALGIACAGTG-NMEAIALIEPMISDKEGFVRKGALLSLALIM 674
>GENEDB_PFALCIPARUM|PF14_0632 [details] [associations]
symbol:PF14_0632 "26S proteasome subunit,
putative" species:5833 "Plasmodium falciparum" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0004175 EMBL:AE014187 GO:GO:0006511
GO:GO:0042176 InterPro:IPR004155 SMART:SM00567 GO:GO:0005838
HOGENOM:HOG000189403 KO:K03032 Pfam:PF01851 RefSeq:XP_001348806.1
ProteinModelPortal:Q8IKH3 IntAct:Q8IKH3 MINT:MINT-1557099
PRIDE:Q8IKH3 EnsemblProtists:PF14_0632:mRNA GeneID:812214
KEGG:pfa:PF14_0632 EuPathDB:PlasmoDB:PF3D7_1466300 OMA:ANDENSH
ProtClustDB:CLSZ2733875 Uniprot:Q8IKH3
Length = 1172
Score = 406 (148.0 bits), Expect = 4.4e-43, Sum P(2) = 4.4e-43
Identities = 117/365 (32%), Positives = 188/365 (51%)
Query: 540 NDIVDDFWPENEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESI- 598
N+IV+D K+ ++ KL IL+G+V+ +L+++FL R+N D+++L K +
Sbjct: 434 NNIVEDVLKYISKKHIFYNKMKKLLYILTGKVTGNLYIEFLHRNNHADLILLDTYKNIVD 493
Query: 599 -RVSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEA 657
R SI H +IA+A M +GTT D FLR N+EWL++A NW K +ATASLGV+++GH E+
Sbjct: 494 SRSSITHHGIVIAHALMQTGTTCDVFLRSNIEWLSKAINWEKFSATASLGVVYKGHVNES 553
Query: 658 LAHMQSYLPRETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQVKDATNEMVRHXXXX 717
+ ++LP T +++ G++ Y LG + N
Sbjct: 554 FMVLSTHLPYNDVSTEIANNINVGLAPSGVYSEGGSL---YALGLIHANYN--------- 601
Query: 718 XXXXXXXXXXRDDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLG-SKSESAIQDMVAYA-K 775
++ + QLK N+ +D V + +GLV LG S E+ ++ A
Sbjct: 602 ----TNDKKVKNYLMSQLKSNM--NDEVLQHGCCLGLGLVCLGDSNDENTYDELKAILYS 655
Query: 776 ETQHEKILRGLAVGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIA--MAYCGSGS 833
++ A+G+ + G + D+L+ + + + R+ ++ M +
Sbjct: 656 DSAVAGESAAYAIGLLKLGSGDDKCIDELLAYAHDTQHEKITRACSISLGFVMFQKEREA 715
Query: 834 NVATKRLLHD--AILRRSGMYTIAMAYCG-SGSNV-ATKRLLHVAVSDVNDDVRREAVTA 889
+ + L+ D AI+R GM+ IAMAYCG S N K+LLH +VSDV+DDVRR AV A
Sbjct: 716 DSLIEELVSDKDAIIRYGGMFAIAMAYCGLSNCNKHIIKKLLHFSVSDVSDDVRRAAVIA 775
Query: 890 LGFIL 894
LGF+L
Sbjct: 776 LGFVL 780
Score = 336 (123.3 bits), Expect = 2.3e-35, Sum P(2) = 2.3e-35
Identities = 79/218 (36%), Positives = 121/218 (55%)
Query: 687 IHANHGA---VINDYLLGQVKDATN-EMVRHXXXXXXXXXXXXXXRDD-IYEQLKFNLYQ 741
IHAN+ + +YL+ Q+K N E+++H D+ Y++LK LY
Sbjct: 596 IHANYNTNDKKVKNYLMSQLKSNMNDEVLQHGCCLGLGLVCLGDSNDENTYDELKAILYS 655
Query: 742 DDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQLENA 801
D AV GE+A A+GL+ LGS + I +++AYA +TQHEKI R ++ + F+M+ + A
Sbjct: 656 DSAVAGESAAYAIGLLKLGSGDDKCIDELLAYAHDTQHEKITRACSISLGFVMFQKEREA 715
Query: 802 DDLVRDLCEEKDAILRRSGMYTIAMAYCG-SGSNV-ATKRLLHDAI------LRRSGMYT 853
D L+ +L +KDAI+R GM+ IAMAYCG S N K+LLH ++ +RR+ +
Sbjct: 716 DSLIEELVSDKDAIIRYGGMFAIAMAYCGLSNCNKHIIKKLLHFSVSDVSDDVRRAAVIA 775
Query: 854 IAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALG 891
+ C S + V + L++ + N VR A ALG
Sbjct: 776 LGFVLCNSPNQVP--KFLNLLIESYNPHVRYGAALALG 811
Score = 286 (105.7 bits), Expect = 2.1e-34, Sum P(4) = 2.1e-34
Identities = 69/201 (34%), Positives = 110/201 (54%)
Query: 197 RITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESI--RVSICHTATIIANAFMHS 254
++ KL IL+G+V+ +L+++FL R+N D+++L K + R SI H +IA+A M +
Sbjct: 453 KMKKLLYILTGKVTGNLYIEFLHRNNHADLILLDTYKNIVDSRSSITHHGIVIAHALMQT 512
Query: 255 GTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRET------- 307
GTT D FLR N+EWL++A NW K +ATASLGV+++GH E+ + ++LP
Sbjct: 513 GTTCDVFLRSNIEWLSKAINWEKFSATASLGVVYKGHVNESFMVLSTHLPYNDVSTEIAN 572
Query: 308 ------GPTSXXXXXXXXXXXXXIHANHGA---VINDYLLGQVKDATNEDDAVTGEAAGI 358
P+ IHAN+ + +YL+ Q+K +N +D V +
Sbjct: 573 NINVGLAPSGVYSEGGSLYALGLIHANYNTNDKKVKNYLMSQLK--SNMNDEVLQHGCCL 630
Query: 359 AMGLVLLG-SKSESAIQDMVA 378
+GLV LG S E+ ++ A
Sbjct: 631 GLGLVCLGDSNDENTYDELKA 651
Score = 253 (94.1 bits), Expect = 2.5e-25, Sum P(3) = 2.5e-25
Identities = 58/166 (34%), Positives = 91/166 (54%)
Query: 340 QVKDATNEDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFI 399
++K D AV GE+A A+GL+ LGS + I +++AYA +TQHEKI R ++ + F+
Sbjct: 648 ELKAILYSDSAVAGESAAYAIGLLKLGSGDDKCIDELLAYAHDTQHEKITRACSISLGFV 707
Query: 400 MYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYC-VSYLYFDLFSDLTYRIVKN---- 454
M+ + AD L+ +L +KDAI+R GM+ IAMAYC +S + L + V +
Sbjct: 708 MFQKEREADSLIEELVSDKDAIIRYGGMFAIAMAYCGLSNCNKHIIKKLLHFSVSDVSDD 767
Query: 455 --RSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALG 498
R+ + + C S + V + L++ + N VR A ALG
Sbjct: 768 VRRAAVIALGFVLCNSPNQVP--KFLNLLIESYNPHVRYGAALALG 811
Score = 180 (68.4 bits), Expect = 1.9e-17, Sum P(3) = 1.9e-17
Identities = 65/189 (34%), Positives = 93/189 (49%)
Query: 325 IHANHGA---VINDYLLGQVKDATNEDDAVTGEAAGIAMGLVLLG-SKSESAIQDMVAYA 380
IHAN+ + +YL+ Q+K +N +D V + +GLV LG S E+ ++ A
Sbjct: 596 IHANYNTNDKKVKNYLMSQLK--SNMNDEVLQHGCCLGLGLVCLGDSNDENTYDELKAIL 653
Query: 381 -KETQHEKILRGLAVGISFIMYGQLENADDLV---RDLCEEK--DAILRRSGMYTIAMAY 434
++ A+G+ + G + D+L+ D EK A G
Sbjct: 654 YSDSAVAGESAAYAIGLLKLGSGDDKCIDELLAYAHDTQHEKITRACSISLGFVMFQKER 713
Query: 435 CVSYLYFDLFSDLTYRIVKNRSGMYTIAMAYCG-SGSNV-ATKRLLHVAVSDVNDDVRRE 492
L +L SD I++ GM+ IAMAYCG S N K+LLH +VSDV+DDVRR
Sbjct: 714 EADSLIEELVSDKD-AIIRY-GGMFAIAMAYCGLSNCNKHIIKKLLHFSVSDVSDDVRRA 771
Query: 493 AVTALGFIL 501
AV ALGF+L
Sbjct: 772 AVIALGFVL 780
Score = 136 (52.9 bits), Expect = 4.4e-43, Sum P(2) = 4.4e-43
Identities = 33/86 (38%), Positives = 51/86 (59%)
Query: 50 SRSFRAQILRTLVRLYHSLSVPD----YVNMAQCWIYLDDPRSVANLLGKLVAGSADDDL 105
++SFR + + LV LY SLS + Y+N+ +C Y+DD + VA +L KL+ L
Sbjct: 245 NKSFRNEYFKLLVNLYLSLSEEELKTEYINLCECLYYIDDYKKVAEILLKLLHNY---HL 301
Query: 106 MAAQIGFDLYESATQAFLASVLQELK 131
MA QI FDL + + FL ++L ++K
Sbjct: 302 MAYQISFDLVDFENKIFLRNILGQIK 327
Score = 68 (29.0 bits), Expect = 2.1e-34, Sum P(4) = 2.1e-34
Identities = 38/165 (23%), Positives = 73/165 (44%)
Query: 741 QDDAVTGEAAGIAMGLVLLGSKSE--SAIQDMVAYAKETQHEKILR-GLAVGISFIMYGQ 797
Q + +T A I++G V+ + E S I+++V+ + I+R G I+ G
Sbjct: 692 QHEKIT-RACSISLGFVMFQKEREADSLIEELVS-----DKDAIIRYGGMFAIAMAYCG- 744
Query: 798 LENADD-LVRDLCE----EKDAILRRSGMYTIAMAYCGSGSNVAT-KRLLHDAI---LRR 848
L N + +++ L + +RR+ + + C S + V LL ++ +R
Sbjct: 745 LSNCNKHIIKKLLHFSVSDVSDDVRRAAVIALGFVLCNSPNQVPKFLNLLIESYNPHVRY 804
Query: 849 SGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFI 893
+ +A C + +N +L ++D D VR+ A +LG I
Sbjct: 805 GAALALGIA-CSATANEEAINMLMPLLTDTTDFVRQSAFISLGLI 848
Score = 68 (29.0 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 44/177 (24%), Positives = 74/177 (41%)
Query: 335 DYLLGQVKDATNEDDAVTGEAAGIAMGLVLLGSKSE--SAIQDMVAYAKETQHEKILR-G 391
D LL D +E +T A I++G V+ + E S I+++V+ + I+R G
Sbjct: 682 DELLAYAHDTQHEK--IT-RACSISLGFVMFQKEREADSLIEELVS-----DKDAIIRYG 733
Query: 392 LAVGISFIMYGQLENADD-LVRDLCE--EKDAI--LRRSGMYTIAMAYCVSYLYFDLFSD 446
I+ G L N + +++ L D +RR+ + + C S F +
Sbjct: 734 GMFAIAMAYCG-LSNCNKHIIKKLLHFSVSDVSDDVRRAAVIALGFVLCNSPNQVPKFLN 792
Query: 447 LTYRIVKNRSGMYTIAMAY---CGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFI 500
L N Y A+A C + +N +L ++D D VR+ A +LG I
Sbjct: 793 LLIESY-NPHVRYGAALALGIACSATANEEAINMLMPLLTDTTDFVRQSAFISLGLI 848
Score = 67 (28.6 bits), Expect = 2.1e-34, Sum P(4) = 2.1e-34
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 443 LFSDLTYRIVKNRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILF 502
L+SD V S Y I + GSG + LL A ++ + R +LGF++F
Sbjct: 653 LYSDSA---VAGESAAYAIGLLKLGSGDDKCIDELLAYAHDTQHEKITRACSISLGFVMF 709
Query: 503 R 503
+
Sbjct: 710 Q 710
Score = 67 (28.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 21/89 (23%), Positives = 38/89 (42%)
Query: 813 DAILRRSGMYTIAMAYCGSGSNVAT----KRLLHD--AILRRSGMYTIAMAYCGSGSNVA 866
D +L+ + + G ++ T K +L+ A+ S Y I + GSG +
Sbjct: 621 DEVLQHGCCLGLGLVCLGDSNDENTYDELKAILYSDSAVAGESAAYAIGLLKLGSGDDKC 680
Query: 867 TKRLLHVAVSDVNDDVRREAVTALGFILF 895
LL A ++ + R +LGF++F
Sbjct: 681 IDELLAYAHDTQHEKITRACSISLGFVMF 709
Score = 38 (18.4 bits), Expect = 2.5e-31, Sum P(4) = 2.5e-31
Identities = 10/49 (20%), Positives = 23/49 (46%)
Query: 616 SGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSY 664
S T +++ + + L T++ + +A SLG+I + + + Y
Sbjct: 815 SATANEEAINMLMPLLTDTTDFVRQSAFISLGLIFQQSNEHCNPNFKKY 863
Score = 37 (18.1 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 405 ENADDL--VRDLCEEKDAILR 423
E AD + + +LCE++D + R
Sbjct: 48 ELADSIFKIEELCEDEDFVGR 68
>UNIPROTKB|Q8IKH3 [details] [associations]
symbol:PF14_0632 "26S proteasome subunit, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0004175 EMBL:AE014187 GO:GO:0006511
GO:GO:0042176 InterPro:IPR004155 SMART:SM00567 GO:GO:0005838
HOGENOM:HOG000189403 KO:K03032 Pfam:PF01851 RefSeq:XP_001348806.1
ProteinModelPortal:Q8IKH3 IntAct:Q8IKH3 MINT:MINT-1557099
PRIDE:Q8IKH3 EnsemblProtists:PF14_0632:mRNA GeneID:812214
KEGG:pfa:PF14_0632 EuPathDB:PlasmoDB:PF3D7_1466300 OMA:ANDENSH
ProtClustDB:CLSZ2733875 Uniprot:Q8IKH3
Length = 1172
Score = 406 (148.0 bits), Expect = 4.4e-43, Sum P(2) = 4.4e-43
Identities = 117/365 (32%), Positives = 188/365 (51%)
Query: 540 NDIVDDFWPENEKEKQLQARITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESI- 598
N+IV+D K+ ++ KL IL+G+V+ +L+++FL R+N D+++L K +
Sbjct: 434 NNIVEDVLKYISKKHIFYNKMKKLLYILTGKVTGNLYIEFLHRNNHADLILLDTYKNIVD 493
Query: 599 -RVSICHTATIIANAFMHSGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEA 657
R SI H +IA+A M +GTT D FLR N+EWL++A NW K +ATASLGV+++GH E+
Sbjct: 494 SRSSITHHGIVIAHALMQTGTTCDVFLRSNIEWLSKAINWEKFSATASLGVVYKGHVNES 553
Query: 658 LAHMQSYLPRETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQVKDATNEMVRHXXXX 717
+ ++LP T +++ G++ Y LG + N
Sbjct: 554 FMVLSTHLPYNDVSTEIANNINVGLAPSGVYSEGGSL---YALGLIHANYN--------- 601
Query: 718 XXXXXXXXXXRDDIYEQLKFNLYQDDAVTGEAAGIAMGLVLLG-SKSESAIQDMVAYA-K 775
++ + QLK N+ +D V + +GLV LG S E+ ++ A
Sbjct: 602 ----TNDKKVKNYLMSQLKSNM--NDEVLQHGCCLGLGLVCLGDSNDENTYDELKAILYS 655
Query: 776 ETQHEKILRGLAVGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIA--MAYCGSGS 833
++ A+G+ + G + D+L+ + + + R+ ++ M +
Sbjct: 656 DSAVAGESAAYAIGLLKLGSGDDKCIDELLAYAHDTQHEKITRACSISLGFVMFQKEREA 715
Query: 834 NVATKRLLHD--AILRRSGMYTIAMAYCG-SGSNV-ATKRLLHVAVSDVNDDVRREAVTA 889
+ + L+ D AI+R GM+ IAMAYCG S N K+LLH +VSDV+DDVRR AV A
Sbjct: 716 DSLIEELVSDKDAIIRYGGMFAIAMAYCGLSNCNKHIIKKLLHFSVSDVSDDVRRAAVIA 775
Query: 890 LGFIL 894
LGF+L
Sbjct: 776 LGFVL 780
Score = 336 (123.3 bits), Expect = 2.3e-35, Sum P(2) = 2.3e-35
Identities = 79/218 (36%), Positives = 121/218 (55%)
Query: 687 IHANHGA---VINDYLLGQVKDATN-EMVRHXXXXXXXXXXXXXXRDD-IYEQLKFNLYQ 741
IHAN+ + +YL+ Q+K N E+++H D+ Y++LK LY
Sbjct: 596 IHANYNTNDKKVKNYLMSQLKSNMNDEVLQHGCCLGLGLVCLGDSNDENTYDELKAILYS 655
Query: 742 DDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFIMYGQLENA 801
D AV GE+A A+GL+ LGS + I +++AYA +TQHEKI R ++ + F+M+ + A
Sbjct: 656 DSAVAGESAAYAIGLLKLGSGDDKCIDELLAYAHDTQHEKITRACSISLGFVMFQKEREA 715
Query: 802 DDLVRDLCEEKDAILRRSGMYTIAMAYCG-SGSNV-ATKRLLHDAI------LRRSGMYT 853
D L+ +L +KDAI+R GM+ IAMAYCG S N K+LLH ++ +RR+ +
Sbjct: 716 DSLIEELVSDKDAIIRYGGMFAIAMAYCGLSNCNKHIIKKLLHFSVSDVSDDVRRAAVIA 775
Query: 854 IAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALG 891
+ C S + V + L++ + N VR A ALG
Sbjct: 776 LGFVLCNSPNQVP--KFLNLLIESYNPHVRYGAALALG 811
Score = 286 (105.7 bits), Expect = 2.1e-34, Sum P(4) = 2.1e-34
Identities = 69/201 (34%), Positives = 110/201 (54%)
Query: 197 RITKLSKILSGEVSIDLHLQFLIRSNKTDMLILKNTKESI--RVSICHTATIIANAFMHS 254
++ KL IL+G+V+ +L+++FL R+N D+++L K + R SI H +IA+A M +
Sbjct: 453 KMKKLLYILTGKVTGNLYIEFLHRNNHADLILLDTYKNIVDSRSSITHHGIVIAHALMQT 512
Query: 255 GTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSYLPRET------- 307
GTT D FLR N+EWL++A NW K +ATASLGV+++GH E+ + ++LP
Sbjct: 513 GTTCDVFLRSNIEWLSKAINWEKFSATASLGVVYKGHVNESFMVLSTHLPYNDVSTEIAN 572
Query: 308 ------GPTSXXXXXXXXXXXXXIHANHGA---VINDYLLGQVKDATNEDDAVTGEAAGI 358
P+ IHAN+ + +YL+ Q+K +N +D V +
Sbjct: 573 NINVGLAPSGVYSEGGSLYALGLIHANYNTNDKKVKNYLMSQLK--SNMNDEVLQHGCCL 630
Query: 359 AMGLVLLG-SKSESAIQDMVA 378
+GLV LG S E+ ++ A
Sbjct: 631 GLGLVCLGDSNDENTYDELKA 651
Score = 253 (94.1 bits), Expect = 2.5e-25, Sum P(3) = 2.5e-25
Identities = 58/166 (34%), Positives = 91/166 (54%)
Query: 340 QVKDATNEDDAVTGEAAGIAMGLVLLGSKSESAIQDMVAYAKETQHEKILRGLAVGISFI 399
++K D AV GE+A A+GL+ LGS + I +++AYA +TQHEKI R ++ + F+
Sbjct: 648 ELKAILYSDSAVAGESAAYAIGLLKLGSGDDKCIDELLAYAHDTQHEKITRACSISLGFV 707
Query: 400 MYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYC-VSYLYFDLFSDLTYRIVKN---- 454
M+ + AD L+ +L +KDAI+R GM+ IAMAYC +S + L + V +
Sbjct: 708 MFQKEREADSLIEELVSDKDAIIRYGGMFAIAMAYCGLSNCNKHIIKKLLHFSVSDVSDD 767
Query: 455 --RSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALG 498
R+ + + C S + V + L++ + N VR A ALG
Sbjct: 768 VRRAAVIALGFVLCNSPNQVP--KFLNLLIESYNPHVRYGAALALG 811
Score = 180 (68.4 bits), Expect = 1.9e-17, Sum P(3) = 1.9e-17
Identities = 65/189 (34%), Positives = 93/189 (49%)
Query: 325 IHANHGA---VINDYLLGQVKDATNEDDAVTGEAAGIAMGLVLLG-SKSESAIQDMVAYA 380
IHAN+ + +YL+ Q+K +N +D V + +GLV LG S E+ ++ A
Sbjct: 596 IHANYNTNDKKVKNYLMSQLK--SNMNDEVLQHGCCLGLGLVCLGDSNDENTYDELKAIL 653
Query: 381 -KETQHEKILRGLAVGISFIMYGQLENADDLV---RDLCEEK--DAILRRSGMYTIAMAY 434
++ A+G+ + G + D+L+ D EK A G
Sbjct: 654 YSDSAVAGESAAYAIGLLKLGSGDDKCIDELLAYAHDTQHEKITRACSISLGFVMFQKER 713
Query: 435 CVSYLYFDLFSDLTYRIVKNRSGMYTIAMAYCG-SGSNV-ATKRLLHVAVSDVNDDVRRE 492
L +L SD I++ GM+ IAMAYCG S N K+LLH +VSDV+DDVRR
Sbjct: 714 EADSLIEELVSDKD-AIIRY-GGMFAIAMAYCGLSNCNKHIIKKLLHFSVSDVSDDVRRA 771
Query: 493 AVTALGFIL 501
AV ALGF+L
Sbjct: 772 AVIALGFVL 780
Score = 136 (52.9 bits), Expect = 4.4e-43, Sum P(2) = 4.4e-43
Identities = 33/86 (38%), Positives = 51/86 (59%)
Query: 50 SRSFRAQILRTLVRLYHSLSVPD----YVNMAQCWIYLDDPRSVANLLGKLVAGSADDDL 105
++SFR + + LV LY SLS + Y+N+ +C Y+DD + VA +L KL+ L
Sbjct: 245 NKSFRNEYFKLLVNLYLSLSEEELKTEYINLCECLYYIDDYKKVAEILLKLLHNY---HL 301
Query: 106 MAAQIGFDLYESATQAFLASVLQELK 131
MA QI FDL + + FL ++L ++K
Sbjct: 302 MAYQISFDLVDFENKIFLRNILGQIK 327
Score = 68 (29.0 bits), Expect = 2.1e-34, Sum P(4) = 2.1e-34
Identities = 38/165 (23%), Positives = 73/165 (44%)
Query: 741 QDDAVTGEAAGIAMGLVLLGSKSE--SAIQDMVAYAKETQHEKILR-GLAVGISFIMYGQ 797
Q + +T A I++G V+ + E S I+++V+ + I+R G I+ G
Sbjct: 692 QHEKIT-RACSISLGFVMFQKEREADSLIEELVS-----DKDAIIRYGGMFAIAMAYCG- 744
Query: 798 LENADD-LVRDLCE----EKDAILRRSGMYTIAMAYCGSGSNVAT-KRLLHDAI---LRR 848
L N + +++ L + +RR+ + + C S + V LL ++ +R
Sbjct: 745 LSNCNKHIIKKLLHFSVSDVSDDVRRAAVIALGFVLCNSPNQVPKFLNLLIESYNPHVRY 804
Query: 849 SGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFI 893
+ +A C + +N +L ++D D VR+ A +LG I
Sbjct: 805 GAALALGIA-CSATANEEAINMLMPLLTDTTDFVRQSAFISLGLI 848
Score = 68 (29.0 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 44/177 (24%), Positives = 74/177 (41%)
Query: 335 DYLLGQVKDATNEDDAVTGEAAGIAMGLVLLGSKSE--SAIQDMVAYAKETQHEKILR-G 391
D LL D +E +T A I++G V+ + E S I+++V+ + I+R G
Sbjct: 682 DELLAYAHDTQHEK--IT-RACSISLGFVMFQKEREADSLIEELVS-----DKDAIIRYG 733
Query: 392 LAVGISFIMYGQLENADD-LVRDLCE--EKDAI--LRRSGMYTIAMAYCVSYLYFDLFSD 446
I+ G L N + +++ L D +RR+ + + C S F +
Sbjct: 734 GMFAIAMAYCG-LSNCNKHIIKKLLHFSVSDVSDDVRRAAVIALGFVLCNSPNQVPKFLN 792
Query: 447 LTYRIVKNRSGMYTIAMAY---CGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFI 500
L N Y A+A C + +N +L ++D D VR+ A +LG I
Sbjct: 793 LLIESY-NPHVRYGAALALGIACSATANEEAINMLMPLLTDTTDFVRQSAFISLGLI 848
Score = 67 (28.6 bits), Expect = 2.1e-34, Sum P(4) = 2.1e-34
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 443 LFSDLTYRIVKNRSGMYTIAMAYCGSGSNVATKRLLHVAVSDVNDDVRREAVTALGFILF 502
L+SD V S Y I + GSG + LL A ++ + R +LGF++F
Sbjct: 653 LYSDSA---VAGESAAYAIGLLKLGSGDDKCIDELLAYAHDTQHEKITRACSISLGFVMF 709
Query: 503 R 503
+
Sbjct: 710 Q 710
Score = 67 (28.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 21/89 (23%), Positives = 38/89 (42%)
Query: 813 DAILRRSGMYTIAMAYCGSGSNVAT----KRLLHD--AILRRSGMYTIAMAYCGSGSNVA 866
D +L+ + + G ++ T K +L+ A+ S Y I + GSG +
Sbjct: 621 DEVLQHGCCLGLGLVCLGDSNDENTYDELKAILYSDSAVAGESAAYAIGLLKLGSGDDKC 680
Query: 867 TKRLLHVAVSDVNDDVRREAVTALGFILF 895
LL A ++ + R +LGF++F
Sbjct: 681 IDELLAYAHDTQHEKITRACSISLGFVMF 709
Score = 38 (18.4 bits), Expect = 2.5e-31, Sum P(4) = 2.5e-31
Identities = 10/49 (20%), Positives = 23/49 (46%)
Query: 616 SGTTSDQFLRDNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQSY 664
S T +++ + + L T++ + +A SLG+I + + + Y
Sbjct: 815 SATANEEAINMLMPLLTDTTDFVRQSAFISLGLIFQQSNEHCNPNFKKY 863
Score = 37 (18.1 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 405 ENADDL--VRDLCEEKDAILR 423
E AD + + +LCE++D + R
Sbjct: 48 ELADSIFKIEELCEDEDFVGR 68
>CGD|CAL0006334 [details] [associations]
symbol:RPN1 species:5476 "Candida albicans" [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0034515 "proteasome storage granule"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] [GO:0030674 "protein binding, bridging"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 CGD:CAL0006334
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0050790
GO:GO:0000502 EMBL:AACQ01000010 GO:GO:0042176 Pfam:PF01851
eggNOG:COG5110 KO:K03028 PANTHER:PTHR10943:SF1 RefSeq:XP_722167.1
STRING:Q5AL21 GeneID:3636147 KEGG:cal:CaO19.4956 Uniprot:Q5AL21
Length = 994
Score = 125 (49.1 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 53/258 (20%), Positives = 101/258 (39%)
Query: 594 TKESIRVSICHTATIIANAFMHSGTTSDQFLR---DNLEWLARATNWAKLTATASLGVIH 650
T SI + + A N F++ G +D+ ++ DN W+ R + TASLG IH
Sbjct: 359 TSGSIDSAKQNLAASFVNGFLNLGFGNDKLVQTEEDNKSWIYRTKGSGMASTTASLGSIH 418
Query: 651 RGHETEALAHMQSYLPRETGPTSXXXXXXXXXXXXXIHANHGAVINDYLLGQVKDATNEM 710
+ + E L + Y E +H A LL + N++
Sbjct: 419 QWNINEGLQVLDKYTYSEDSEVKAGALLGTGVVSANVHDEVDAAFA--LLQEYVHEPNKL 476
Query: 711 VRHXXXXXXXXXXXXXXRDDIYEQLKFNLYQDDAVTGEA---AGIAMGLVLLGS---KSE 764
+ +D+ L L D ++ E A +A+G + +G+
Sbjct: 477 YQTAAINGLGIAFAGSANEDVLNLL-LPLVSDLDISLEISCLAALALGHIFVGTCHGDVT 535
Query: 765 SAIQDMVAYAKETQ-HEKILRGLAVGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYT 823
S I + TQ K ++ +++G+ + G+ E A+D++ + + I + +
Sbjct: 536 STILQTLLERDYTQLTNKFIKFMSLGLGLLYMGRTEQAEDVLETIDAIEHPISKTLKVLV 595
Query: 824 IAMAYCGSGSNVATKRLL 841
A+ G+G+ + + LL
Sbjct: 596 NICAFAGTGNVLQIQALL 613
Score = 51 (23.0 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 30/106 (28%), Positives = 42/106 (39%)
Query: 28 FSRVHSALKSCVPWCLAMSSIQSRSFRAQILRTLVRLYHSLSVPDYVNMAQCWIYLDDPR 87
F+RV + SCVP+ + SF L T +Y LS I LDD
Sbjct: 226 FARVCLYVTSCVPYLAPPDDV---SF----LNTAYSIY--LSHNQLTQALTLAIKLDD-- 274
Query: 88 SVANLLGKLVAGSADDDLMAAQIGFDLYESATQAFLASVLQELKTC 133
N L K V S D+ + Q+GF L + + E++ C
Sbjct: 275 ---NELIKQVFDSTTDESLHKQLGFILSQQNSNFKYPGENPEVQEC 317
>POMBASE|SPBP19A11.03c [details] [associations]
symbol:mts4 "19S proteasome regulatory subunit Mts4"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR016024 InterPro:IPR016643 PIRSF:PIRSF015965
PomBase:SPBP19A11.03c INTERPRO:IPR002015 GO:GO:0005829
GO:GO:0005634 GO:GO:0007346 GO:GO:0030234 SUPFAM:SSF48371
GO:GO:0043161 EMBL:CU329671 GO:GO:0050790 GenomeReviews:CU329671_GR
GO:GO:0042176 GO:GO:0008540 Pfam:PF01851 eggNOG:COG5110
HOGENOM:HOG000176022 KO:K03028 OMA:IAQGLTH PANTHER:PTHR10943:SF1
EMBL:Y09819 PIR:T52488 RefSeq:NP_596171.1 ProteinModelPortal:P87048
IntAct:P87048 STRING:P87048 EnsemblFungi:SPBP19A11.03c.1
GeneID:2541268 KEGG:spo:SPBP19A11.03c OrthoDB:EOG4P8JSC
NextBio:20802380 Uniprot:P87048
Length = 891
Score = 125 (49.1 bits), Expect = 0.00060, P = 0.00060
Identities = 49/250 (19%), Positives = 111/250 (44%)
Query: 606 ATIIANAFMHSGTTSDQFLR---DNLEWLARATNWAKLTATASLGVIHRGHETEALAHMQ 662
A NA +++G ++D+ + + W+ + ++ATAS+G++ + L+ +
Sbjct: 370 ANTFVNALVNAGYSNDRLILVDDEKTSWIYKNKESGLISATASIGLLQLWNVDMGLSLLD 429
Query: 663 SYLPRETGPTSXXXXXXXXXXXXXIH--ANHG-AVINDYL-LGQVKDATNEMVRHXXXXX 718
YL T + A+ A++++YL G VK +R
Sbjct: 430 KYLYSSEENTKAGALLGIGVTNVAVRNEADPAMAILSEYLETGSVK------LRASAILG 483
Query: 719 XXXXXXXXXRDDIYEQLKFNLYQDDAVTGEA--AGIAMGLVLLGS----KSESAIQDMVA 772
R+D+ + L + D + A +++GL+ +G+ + + +Q ++
Sbjct: 484 LGLAYSGANREDLLDMLSPIVTDTDCPMQLSCLAALSLGLIFVGTCNGDVASTILQTLME 543
Query: 773 YAKETQHEKILRGLAVGISFIMYGQLENADDLVRDLCEEKDAILRRSGMYTIAMAYCGSG 832
+ Q+++ R +A+G++ + G+ + AD V L + I R++ + +Y G+G
Sbjct: 544 REESAQNDQWGRFMALGLALLFNGKQDLADATVETLKAIEGKIARQAEILVDICSYAGTG 603
Query: 833 SNVATKRLLH 842
+ + ++LLH
Sbjct: 604 NVLHIQKLLH 613
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.133 0.385 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 988 834 0.00080 122 3 11 22 0.37 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 27
No. of states in DFA: 618 (66 KB)
Total size of DFA: 364 KB (2177 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 63.39u 0.09s 63.48t Elapsed: 00:00:12
Total cpu time: 63.41u 0.09s 63.50t Elapsed: 00:00:12
Start: Thu Aug 15 11:24:11 2013 End: Thu Aug 15 11:24:23 2013