Your job contains 1 sequence.
>psy6895
MLMFREEKSPEDEIKAWQFWHSRQHSSIVMLMFREEKSPEDEIKAWQFWHSRQHSVKYFR
IHF
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6895
(63 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0259211 - symbol:grh "grainy head" species:7227 "D... 166 6.3e-11 1
ZFIN|ZDB-GENE-030131-3665 - symbol:grhl1 "grainyhead-like... 116 5.1e-06 1
UNIPROTKB|Q9NZI5 - symbol:GRHL1 "Grainyhead-like protein ... 113 1.1e-05 1
MGI|MGI:2182540 - symbol:Grhl1 "grainyhead-like 1 (Drosop... 113 1.1e-05 1
RGD|1305735 - symbol:Grhl1 "grainyhead-like 1 (Drosophila... 113 1.1e-05 1
UNIPROTKB|Q0VCW0 - symbol:GRHL1 "Grainyhead-like 1 (Droso... 113 1.1e-05 1
UNIPROTKB|E1BY47 - symbol:GRHL1 "Uncharacterized protein"... 110 2.3e-05 1
ZFIN|ZDB-GENE-060503-719 - symbol:grhl2b "grainyhead-like... 107 4.6e-05 1
UNIPROTKB|F1NXA4 - symbol:F1NXA4 "Uncharacterized protein... 107 4.8e-05 1
UNIPROTKB|F1PBL0 - symbol:GRHL2 "Uncharacterized protein"... 107 4.9e-05 1
UNIPROTKB|Q6ISB3 - symbol:GRHL2 "Grainyhead-like protein ... 107 4.9e-05 1
UNIPROTKB|F1S0Q6 - symbol:GRHL2 "Uncharacterized protein"... 107 4.9e-05 1
MGI|MGI:2182543 - symbol:Grhl2 "grainyhead-like 2 (Drosop... 107 4.9e-05 1
RGD|1561191 - symbol:Grhl2 "grainyhead-like 2 (Drosophila... 107 4.9e-05 1
UNIPROTKB|F1N6S4 - symbol:GRHL2 "Uncharacterized protein"... 107 4.9e-05 1
WB|WBGene00001707 - symbol:grh-1 species:6239 "Caenorhabd... 105 6.9e-05 1
ZFIN|ZDB-GENE-050913-123 - symbol:grhl2a "grainyhead-like... 97 0.00054 1
UNIPROTKB|F1NZ42 - symbol:GRHL3 "Uncharacterized protein"... 96 0.00071 1
>FB|FBgn0259211 [details] [associations]
symbol:grh "grainy head" species:7227 "Drosophila
melanogaster" [GO:0003677 "DNA binding" evidence=IDA] [GO:0005634
"nucleus" evidence=NAS;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEP] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=NAS] [GO:0008362
"chitin-based embryonic cuticle biosynthetic process" evidence=IMP]
[GO:0007009 "plasma membrane organization" evidence=IMP]
[GO:0035159 "regulation of tube length, open tracheal system"
evidence=IMP] [GO:0007424 "open tracheal system development"
evidence=IEP;TAS] [GO:0008360 "regulation of cell shape"
evidence=IMP] [GO:0007426 "tracheal outgrowth, open tracheal
system" evidence=IMP] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0007402 "ganglion mother cell fate determination"
evidence=TAS] [GO:0007419 "ventral cord development" evidence=NAS]
[GO:0035152 "regulation of tube architecture, open tracheal system"
evidence=TAS] [GO:0007428 "primary branching, open tracheal system"
evidence=TAS] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0003382 "epithelial cell morphogenesis"
evidence=IMP] [GO:0042803 "protein homodimerization activity"
evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0007464 "R3/R4 cell fate commitment"
evidence=IMP] [GO:0061041 "regulation of wound healing"
evidence=IMP] [GO:0040003 "chitin-based cuticle development"
evidence=IMP] [GO:0042052 "rhabdomere development" evidence=IMP]
EMBL:AE013599 GO:GO:0005634 GO:GO:0008360 GO:GO:0008362
GO:GO:0043565 GO:GO:0007464 GO:GO:0007419 GO:GO:0045944
GO:GO:0007009 GO:GO:0003700 GO:GO:0006351 GO:GO:0003382
GO:GO:0042127 GO:GO:0035159 GO:GO:0007402 GO:GO:0042052
GO:GO:0007428 EMBL:X15657 EMBL:AY052066 EMBL:BT001414 EMBL:BT003182
EMBL:BT029431 EMBL:AL035312 EMBL:BT011460 PIR:S06206
RefSeq:NP_001246401.1 RefSeq:NP_476842.2 RefSeq:NP_476843.2
RefSeq:NP_476844.2 RefSeq:NP_476845.2 RefSeq:NP_725725.1
RefSeq:NP_725726.1 UniGene:Dm.3595 DIP:DIP-59591N STRING:P13002
PaxDb:P13002 EnsemblMetazoa:FBtr0299706 GeneID:37038
KEGG:dme:Dmel_CG42311 CTD:37038 FlyBase:FBgn0259211
eggNOG:NOG241458 GeneTree:ENSGT00550000074370 InParanoid:P13002
KO:K09275 OrthoDB:EOG4VHHNF PhylomeDB:P13002 GenomeRNAi:37038
NextBio:801628 Bgee:P13002 GermOnline:CG5058 GO:GO:0061041
GO:GO:0007426 InterPro:IPR007604 Pfam:PF04516 Uniprot:P13002
Length = 1333
Score = 166 (63.5 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 29/31 (93%), Positives = 31/31 (100%)
Query: 27 SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
S++MLMFREEKSPEDEIKAWQFWHSRQHSVK
Sbjct: 952 SVIMLMFREEKSPEDEIKAWQFWHSRQHSVK 982
Score = 147 (56.8 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 26/26 (100%), Positives = 26/26 (100%)
Query: 1 MLMFREEKSPEDEIKAWQFWHSRQHS 26
MLMFREEKSPEDEIKAWQFWHSRQHS
Sbjct: 955 MLMFREEKSPEDEIKAWQFWHSRQHS 980
>ZFIN|ZDB-GENE-030131-3665 [details] [associations]
symbol:grhl1 "grainyhead-like 1 (Drosophila)"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0003334 "keratinocyte development" evidence=IMP] [GO:0008544
"epidermis development" evidence=IMP] ZFIN:ZDB-GENE-030131-3665
GO:GO:0005737 GO:GO:0008544 GeneTree:ENSGT00550000074370 KO:K09275
InterPro:IPR007604 Pfam:PF04516 CTD:29841 EMBL:CR627496
IPI:IPI00804041 RefSeq:XP_001923763.1 UniGene:Dr.121918
UniGene:Dr.150450 Ensembl:ENSDART00000087454
Ensembl:ENSDART00000148455 GeneID:324942 KEGG:dre:324942
NextBio:20809047 Uniprot:E7FCE3
Length = 613
Score = 116 (45.9 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 18/31 (58%), Positives = 27/31 (87%)
Query: 27 SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
S+VM++F EEKS +D++K W++WHSRQH+ K
Sbjct: 292 SVVMVVFGEEKSRDDQLKHWKYWHSRQHTAK 322
Score = 101 (40.6 bits), Expect = 0.00021, P = 0.00021
Identities = 15/27 (55%), Positives = 24/27 (88%)
Query: 1 MLMFREEKSPEDEIKAWQFWHSRQHSS 27
M++F EEKS +D++K W++WHSRQH++
Sbjct: 295 MVVFGEEKSRDDQLKHWKYWHSRQHTA 321
>UNIPROTKB|Q9NZI5 [details] [associations]
symbol:GRHL1 "Grainyhead-like protein 1 homolog"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] Reactome:REACT_111217 GO:GO:0007275
GO:GO:0005794 EMBL:CH471053 GO:GO:0005654 GO:GO:0006355
GO:GO:0044281 GO:GO:0003677 GO:GO:0044255 GO:GO:0006351
eggNOG:NOG241458 KO:K09275 InterPro:IPR007604 Pfam:PF04516
EMBL:AF198489 EMBL:AF411210 EMBL:AK312950 EMBL:AC010969
EMBL:BC067519 EMBL:BC067520 EMBL:BC067521 IPI:IPI00181670
IPI:IPI00185043 IPI:IPI00739435 RefSeq:NP_937825.2
UniGene:Hs.418493 ProteinModelPortal:Q9NZI5 STRING:Q9NZI5
PhosphoSite:Q9NZI5 DMDM:90101332 PaxDb:Q9NZI5 PRIDE:Q9NZI5
Ensembl:ENST00000324883 Ensembl:ENST00000324907
Ensembl:ENST00000472167 GeneID:29841 KEGG:hsa:29841 UCSC:uc002raa.3
UCSC:uc002rad.3 CTD:29841 GeneCards:GC02P010085 H-InvDB:HIX0029827
H-InvDB:HIX0029957 HGNC:HGNC:17923 HPA:HPA005798 HPA:HPA006420
MIM:609786 neXtProt:NX_Q9NZI5 PharmGKB:PA134971477
HOVERGEN:HBG054154 OrthoDB:EOG46Q6S5 ChiTaRS:GRHL1 GenomeRNAi:29841
NextBio:52369 ArrayExpress:Q9NZI5 Bgee:Q9NZI5 CleanEx:HS_GRHL1
Genevestigator:Q9NZI5 GermOnline:ENSG00000134317 Uniprot:Q9NZI5
Length = 618
Score = 113 (44.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 16/31 (51%), Positives = 27/31 (87%)
Query: 27 SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
S++M++F E+KS ED+++ W++WHSRQH+ K
Sbjct: 302 SVIMVVFAEDKSREDQLRHWKYWHSRQHTAK 332
Score = 99 (39.9 bits), Expect = 0.00035, P = 0.00035
Identities = 14/27 (51%), Positives = 24/27 (88%)
Query: 1 MLMFREEKSPEDEIKAWQFWHSRQHSS 27
M++F E+KS ED+++ W++WHSRQH++
Sbjct: 305 MVVFAEDKSREDQLRHWKYWHSRQHTA 331
>MGI|MGI:2182540 [details] [associations]
symbol:Grhl1 "grainyhead-like 1 (Drosophila)" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=ISA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
MGI:MGI:2182540 GO:GO:0007275 GO:GO:0005634 GO:GO:0005794
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 eggNOG:NOG241458
GeneTree:ENSGT00550000074370 KO:K09275 InterPro:IPR007604
Pfam:PF04516 CTD:29841 HOVERGEN:HBG054154 OrthoDB:EOG46Q6S5
EMBL:AF411211 EMBL:AF411212 EMBL:AK161048 EMBL:BC013080
EMBL:BC037233 IPI:IPI00281355 IPI:IPI00623728 RefSeq:NP_001154878.1
UniGene:Mm.263068 STRING:Q921D9 PhosphoSite:Q921D9 PRIDE:Q921D9
Ensembl:ENSMUST00000085553 GeneID:195733 KEGG:mmu:195733
UCSC:uc007nem.2 UCSC:uc007nen.2 HOGENOM:HOG000220859
InParanoid:Q921D9 OMA:DKTREDQ NextBio:371812 Bgee:Q921D9
CleanEx:MM_GRHL1 Genevestigator:Q921D9
GermOnline:ENSMUSG00000020656 Uniprot:Q921D9
Length = 618
Score = 113 (44.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 16/31 (51%), Positives = 27/31 (87%)
Query: 27 SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
S++M++F E+KS ED+++ W++WHSRQH+ K
Sbjct: 302 SVIMVVFAEDKSREDQLRHWKYWHSRQHTAK 332
Score = 99 (39.9 bits), Expect = 0.00035, P = 0.00035
Identities = 14/27 (51%), Positives = 24/27 (88%)
Query: 1 MLMFREEKSPEDEIKAWQFWHSRQHSS 27
M++F E+KS ED+++ W++WHSRQH++
Sbjct: 305 MVVFAEDKSREDQLRHWKYWHSRQHTA 331
>RGD|1305735 [details] [associations]
symbol:Grhl1 "grainyhead-like 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO] RGD:1305735 GO:GO:0005634 GO:GO:0005794
GeneTree:ENSGT00550000074370 KO:K09275 InterPro:IPR007604
Pfam:PF04516 CTD:29841 OrthoDB:EOG46Q6S5 IPI:IPI00366859
RefSeq:XP_002726773.1 RefSeq:XP_234006.5 Ensembl:ENSRNOT00000038519
GeneID:313993 KEGG:rno:313993 NextBio:667101 Uniprot:D3ZZW4
Length = 618
Score = 113 (44.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 16/31 (51%), Positives = 27/31 (87%)
Query: 27 SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
S++M++F E+KS ED+++ W++WHSRQH+ K
Sbjct: 302 SVIMVVFAEDKSREDQLRHWKYWHSRQHTAK 332
Score = 99 (39.9 bits), Expect = 0.00035, P = 0.00035
Identities = 14/27 (51%), Positives = 24/27 (88%)
Query: 1 MLMFREEKSPEDEIKAWQFWHSRQHSS 27
M++F E+KS ED+++ W++WHSRQH++
Sbjct: 305 MVVFAEDKSREDQLRHWKYWHSRQHTA 331
>UNIPROTKB|Q0VCW0 [details] [associations]
symbol:GRHL1 "Grainyhead-like 1 (Drosophila)" species:9913
"Bos taurus" [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] GO:GO:0005634 GO:GO:0005794
eggNOG:NOG241458 GeneTree:ENSGT00550000074370 KO:K09275
InterPro:IPR007604 Pfam:PF04516 CTD:29841 HOVERGEN:HBG054154
OrthoDB:EOG46Q6S5 HOGENOM:HOG000220859 OMA:DKTREDQ
EMBL:DAAA02031936 EMBL:DAAA02031935 EMBL:BC119971 IPI:IPI00706068
RefSeq:NP_001069918.1 UniGene:Bt.58358 STRING:Q0VCW0
Ensembl:ENSBTAT00000009846 GeneID:617248 KEGG:bta:617248
InParanoid:Q0VCW0 NextBio:20900557 Uniprot:Q0VCW0
Length = 629
Score = 113 (44.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 16/31 (51%), Positives = 27/31 (87%)
Query: 27 SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
S++M++F E+KS ED+++ W++WHSRQH+ K
Sbjct: 301 SVIMVVFAEDKSREDQLRHWKYWHSRQHTAK 331
Score = 99 (39.9 bits), Expect = 0.00035, P = 0.00035
Identities = 14/27 (51%), Positives = 24/27 (88%)
Query: 1 MLMFREEKSPEDEIKAWQFWHSRQHSS 27
M++F E+KS ED+++ W++WHSRQH++
Sbjct: 304 MVVFAEDKSREDQLRHWKYWHSRQHTA 330
>UNIPROTKB|E1BY47 [details] [associations]
symbol:GRHL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] GO:GO:0005634 GO:GO:0005794
GeneTree:ENSGT00550000074370 InterPro:IPR007604 Pfam:PF04516
OMA:DKTREDQ EMBL:AADN02018706 IPI:IPI00575564
Ensembl:ENSGALT00000026520 Uniprot:E1BY47
Length = 624
Score = 110 (43.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 15/31 (48%), Positives = 27/31 (87%)
Query: 27 SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
S++M++F E+K+ ED+++ W++WHSRQH+ K
Sbjct: 297 SVIMVVFAEDKTREDQLRHWKYWHSRQHTAK 327
Score = 96 (38.9 bits), Expect = 0.00073, P = 0.00073
Identities = 13/27 (48%), Positives = 24/27 (88%)
Query: 1 MLMFREEKSPEDEIKAWQFWHSRQHSS 27
M++F E+K+ ED+++ W++WHSRQH++
Sbjct: 300 MVVFAEDKTREDQLRHWKYWHSRQHTA 326
>ZFIN|ZDB-GENE-060503-719 [details] [associations]
symbol:grhl2b "grainyhead-like 2b (Drosophila)"
species:7955 "Danio rerio" [GO:0048839 "inner ear development"
evidence=IMP] ZFIN:ZDB-GENE-060503-719 GO:GO:0048839
GeneTree:ENSGT00550000074370 InterPro:IPR007604 Pfam:PF04516
EMBL:BX294657 EMBL:BK008058 IPI:IPI01024170 UniGene:Dr.119348
Ensembl:ENSDART00000149221 Uniprot:F7VJQ5
Length = 601
Score = 107 (42.7 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 15/31 (48%), Positives = 27/31 (87%)
Query: 27 SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
S+VM++F E+K+ ++++K W++WHSRQH+ K
Sbjct: 283 SVVMVVFSEDKNRDEQLKYWKYWHSRQHTAK 313
>UNIPROTKB|F1NXA4 [details] [associations]
symbol:F1NXA4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] GO:GO:0005634 GO:GO:0005737
GeneTree:ENSGT00550000074370 InterPro:IPR007604 Pfam:PF04516
EMBL:AADN02031510 EMBL:AADN02031511 EMBL:AADN02031512
EMBL:AADN02031513 EMBL:AADN02031514 EMBL:AADN02031515
EMBL:AADN02031516 IPI:IPI00581005 Ensembl:ENSGALT00000022978
OMA:LENCKRE Uniprot:F1NXA4
Length = 617
Score = 107 (42.7 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 15/31 (48%), Positives = 27/31 (87%)
Query: 27 SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
S+VM++F E+K+ ++++K W++WHSRQH+ K
Sbjct: 293 SVVMVVFSEDKNRDEQLKYWKYWHSRQHTAK 323
>UNIPROTKB|F1PBL0 [details] [associations]
symbol:GRHL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] GO:GO:0005634 GO:GO:0005737
GeneTree:ENSGT00550000074370 InterPro:IPR007604 Pfam:PF04516
OMA:KREQYSA EMBL:AAEX03008692 Ensembl:ENSCAFT00000000905
Uniprot:F1PBL0
Length = 625
Score = 107 (42.7 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 15/31 (48%), Positives = 27/31 (87%)
Query: 27 SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
S+VM++F E+K+ ++++K W++WHSRQH+ K
Sbjct: 298 SVVMVVFSEDKNRDEQLKYWKYWHSRQHTAK 328
>UNIPROTKB|Q6ISB3 [details] [associations]
symbol:GRHL2 "Grainyhead-like protein 2 homolog"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] GO:GO:0005634
GO:GO:0005737 EMBL:CH471060 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Orphanet:90635 eggNOG:NOG241458 KO:K09275
InterPro:IPR007604 Pfam:PF04516 HOVERGEN:HBG054154
HOGENOM:HOG000220859 EMBL:AK023844 EMBL:BC069618 EMBL:BC069633
EMBL:BC069638 EMBL:BC129822 EMBL:BC129823 IPI:IPI00016576
IPI:IPI00736700 RefSeq:NP_079191.2 UniGene:Hs.661088
ProteinModelPortal:Q6ISB3 IntAct:Q6ISB3 STRING:Q6ISB3
PhosphoSite:Q6ISB3 DMDM:74736618 PRIDE:Q6ISB3
Ensembl:ENST00000251808 Ensembl:ENST00000395927 GeneID:79977
KEGG:hsa:79977 UCSC:uc010mbu.3 CTD:79977 GeneCards:GC08P102575
HGNC:HGNC:2799 HPA:HPA004820 MIM:608576 MIM:608641
neXtProt:NX_Q6ISB3 PharmGKB:PA27270 InParanoid:Q6ISB3 OMA:KREQYSA
OrthoDB:EOG4FBHSN PhylomeDB:Q6ISB3 GenomeRNAi:79977 NextBio:70005
ArrayExpress:Q6ISB3 Bgee:Q6ISB3 CleanEx:HS_GRHL2
Genevestigator:Q6ISB3 Uniprot:Q6ISB3
Length = 625
Score = 107 (42.7 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 15/31 (48%), Positives = 27/31 (87%)
Query: 27 SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
S+VM++F E+K+ ++++K W++WHSRQH+ K
Sbjct: 298 SVVMVVFSEDKNRDEQLKYWKYWHSRQHTAK 328
>UNIPROTKB|F1S0Q6 [details] [associations]
symbol:GRHL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
GO:GO:0005634 GO:GO:0005737 GeneTree:ENSGT00550000074370
InterPro:IPR007604 Pfam:PF04516 OMA:KREQYSA EMBL:CU302245
EMBL:CU639442 Ensembl:ENSSSCT00000006649 Uniprot:F1S0Q6
Length = 625
Score = 107 (42.7 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 15/31 (48%), Positives = 27/31 (87%)
Query: 27 SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
S+VM++F E+K+ ++++K W++WHSRQH+ K
Sbjct: 298 SVVMVVFSEDKNRDEQLKYWKYWHSRQHTAK 328
>MGI|MGI:2182543 [details] [associations]
symbol:Grhl2 "grainyhead-like 2 (Drosophila)" species:10090
"Mus musculus" [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0003677 "DNA binding" evidence=ISA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISA]
MGI:MGI:2182543 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0001701 GO:GO:0003700 GO:GO:0006351 GO:GO:0001843
eggNOG:NOG241458 GeneTree:ENSGT00550000074370 KO:K09275
InterPro:IPR007604 Pfam:PF04516 HOVERGEN:HBG054154
HOGENOM:HOG000220859 CTD:79977 OMA:KREQYSA OrthoDB:EOG4FBHSN
EMBL:AF411213 EMBL:BC042575 EMBL:BC055035 IPI:IPI00282561
RefSeq:NP_080772.2 UniGene:Mm.244612 ProteinModelPortal:Q8K5C0
IntAct:Q8K5C0 STRING:Q8K5C0 PhosphoSite:Q8K5C0 PaxDb:Q8K5C0
PRIDE:Q8K5C0 Ensembl:ENSMUST00000022895 GeneID:252973
KEGG:mmu:252973 UCSC:uc007vne.2 InParanoid:Q8K5C0 NextBio:387437
Bgee:Q8K5C0 CleanEx:MM_GRHL2 Genevestigator:Q8K5C0
GermOnline:ENSMUSG00000022286 Uniprot:Q8K5C0
Length = 625
Score = 107 (42.7 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 15/31 (48%), Positives = 27/31 (87%)
Query: 27 SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
S+VM++F E+K+ ++++K W++WHSRQH+ K
Sbjct: 298 SVVMVVFSEDKNRDEQLKYWKYWHSRQHTAK 328
>RGD|1561191 [details] [associations]
symbol:Grhl2 "grainyhead-like 2 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001701 "in utero embryonic development"
evidence=ISO] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0005730 "nucleolus"
evidence=ISO] RGD:1561191 InterPro:IPR007604 Pfam:PF04516
IPI:IPI00948662 Ensembl:ENSRNOT00000064187 UCSC:RGD:1561191
Uniprot:F1M5L0
Length = 625
Score = 107 (42.7 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 15/31 (48%), Positives = 27/31 (87%)
Query: 27 SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
S+VM++F E+K+ ++++K W++WHSRQH+ K
Sbjct: 298 SVVMVVFSEDKNRDEQLKYWKYWHSRQHTAK 328
>UNIPROTKB|F1N6S4 [details] [associations]
symbol:GRHL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
GO:GO:0005634 GO:GO:0005737 GeneTree:ENSGT00550000074370
InterPro:IPR007604 Pfam:PF04516 OMA:KREQYSA EMBL:DAAA02039341
EMBL:DAAA02039342 EMBL:DAAA02039343 EMBL:DAAA02039344
IPI:IPI00999829 Ensembl:ENSBTAT00000005935 Uniprot:F1N6S4
Length = 630
Score = 107 (42.7 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 15/31 (48%), Positives = 27/31 (87%)
Query: 27 SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
S+VM++F E+K+ ++++K W++WHSRQH+ K
Sbjct: 303 SVVMVVFSEDKNRDEQLKYWKYWHSRQHTAK 333
>WB|WBGene00001707 [details] [associations]
symbol:grh-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0000003 GeneTree:ENSGT00550000074370
InterPro:IPR007604 Pfam:PF04516 EMBL:AY323527 EMBL:FO081633
RefSeq:NP_490837.2 UniGene:Cel.16411 ProteinModelPortal:G5EDF0
EnsemblMetazoa:Y48G8AR.1 GeneID:190048 KEGG:cel:CELE_Y48G8AR.1
CTD:190048 WormBase:Y48G8AR.1 OMA:ERIMLYV NextBio:944480
Uniprot:G5EDF0
Length = 563
Score = 105 (42.0 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 19/36 (52%), Positives = 27/36 (75%)
Query: 22 SRQHSSIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
S+ S +M++FRE+K+ E+EIK WQ WH+RQH K
Sbjct: 242 SQTVKSQLMVVFREDKTYEEEIKTWQSWHARQHVSK 277
Score = 103 (41.3 bits), Expect = 0.00011, P = 0.00011
Identities = 17/27 (62%), Positives = 23/27 (85%)
Query: 1 MLMFREEKSPEDEIKAWQFWHSRQHSS 27
M++FRE+K+ E+EIK WQ WH+RQH S
Sbjct: 250 MVVFREDKTYEEEIKTWQSWHARQHVS 276
>ZFIN|ZDB-GENE-050913-123 [details] [associations]
symbol:grhl2a "grainyhead-like 2a (Drosophila)"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND]
ZFIN:ZDB-GENE-050913-123 GeneTree:ENSGT00550000074370
InterPro:IPR007604 Pfam:PF04516 EMBL:CU104697 IPI:IPI01023469
PRIDE:F8W5L7 Ensembl:ENSDART00000148528 Bgee:F8W5L7 Uniprot:F8W5L7
Length = 593
Score = 97 (39.2 bits), Expect = 0.00054, P = 0.00054
Identities = 13/31 (41%), Positives = 25/31 (80%)
Query: 27 SIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
++VM++F +EK ++++K W +WH+RQH+ K
Sbjct: 271 TVVMVVFGQEKCRDEQLKHWNYWHTRQHTAK 301
>UNIPROTKB|F1NZ42 [details] [associations]
symbol:GRHL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000981 "sequence-specific DNA binding RNA polymerase
II transcription factor activity" evidence=IEA] [GO:0001736
"establishment of planar polarity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007389 "pattern specification process" evidence=IEA]
[GO:0007398 "ectoderm development" evidence=IEA] [GO:0007417
"central nervous system development" evidence=IEA] [GO:0008544
"epidermis development" evidence=IEA] [GO:0032321 "positive
regulation of Rho GTPase activity" evidence=IEA] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IEA]
[GO:0042060 "wound healing" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0061029 "eyelid development in camera-type eye"
evidence=IEA] [GO:0090103 "cochlea morphogenesis" evidence=IEA]
[GO:0090179 "planar cell polarity pathway involved in neural tube
closure" evidence=IEA] GO:GO:0005634 GO:GO:0003677 GO:GO:0045944
GO:GO:0000981 GO:GO:0042060 GO:GO:0032321 GO:GO:0032956
GO:GO:0090179 GeneTree:ENSGT00550000074370 InterPro:IPR007604
Pfam:PF04516 OMA:SPFAEEF EMBL:AADN02043720 IPI:IPI00602201
Ensembl:ENSGALT00000006759 Uniprot:F1NZ42
Length = 611
Score = 96 (38.9 bits), Expect = 0.00071, P = 0.00071
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 22 SRQHSSIVMLMFREEKSPEDEIKAWQFWHSRQHSVK 57
S + S+VM++F EK P +++K W+ WHSRQ + K
Sbjct: 285 SNKVKSVVMIVFDNEKIPTEQLKFWKHWHSRQPTAK 320
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.132 0.448 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 63 63 0.00091 102 3 11 22 0.49 27
29 0.42 28
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 443 (47 KB)
Total size of DFA: 100 KB (2072 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.40u 0.08s 9.48t Elapsed: 00:00:02
Total cpu time: 9.40u 0.08s 9.48t Elapsed: 00:00:02
Start: Thu Aug 15 11:26:32 2013 End: Thu Aug 15 11:26:34 2013