RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy6895
         (63 letters)



>d1rpma_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens),
           mu [TaxId: 9606]}
          Length = 278

 Score = 21.7 bits (45), Expect = 9.2
 Identities = 8/47 (17%), Positives = 17/47 (36%), Gaps = 3/47 (6%)

Query: 17  WQFWHSRQHSSIVMLMFREEKSPEDEIKAWQFWHSRQHSVKYFRIHF 63
           W+       +SI+M+    E      +K  ++W       K  ++  
Sbjct: 105 WRMVWHENTASIIMVTNLVEV---GRVKCCKYWPDDTEIYKDIKVTL 148


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.325    0.132    0.448 

Gapped
Lambda     K      H
   0.267   0.0485    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 277,148
Number of extensions: 9888
Number of successful extensions: 43
Number of sequences better than 10.0: 1
Number of HSP's gapped: 43
Number of HSP's successfully gapped: 5
Length of query: 63
Length of database: 2,407,596
Length adjustment: 32
Effective length of query: 31
Effective length of database: 1,968,236
Effective search space: 61015316
Effective search space used: 61015316
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 47 (22.5 bits)