BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6898
(111 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|D8VNS9|FCNV3_CERRY Ryncolin-3 OS=Cerberus rynchops PE=1 SV=1
Length = 347
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK---DGIPGTNG 74
IS +I L G+ G+PG PG+ GI G G+ G PG GLPG+ DGIPG G
Sbjct: 43 ISDKIILQGQPGIPGIPGVPGINGSEGLKGDPGPQGLPGETGFDGIPGVAG 93
>sp|Q09457|BLI1_CAEEL Cuticle collagen bli-1 OS=Caenorhabditis elegans GN=bli-1 PE=3 SV=2
Length = 948
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG-----IPGTNGTKTDHYA 81
I G G++G+DG PG PG G G NG G PGK GLPG++G IPG G
Sbjct: 445 IDGEQGVNGQDGQPGAPGAPGYHGMNGSPGTPGKPGLPGRNGQSCKSIPGPPGQPGVMGV 504
Query: 82 MGADTKSFSDG 92
G D +DG
Sbjct: 505 PGRDGDPGTDG 515
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 29/47 (61%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 75
G G DG G+PGE G+DG G NG DG PG G PG G+ G+ GT
Sbjct: 429 GERGPDGTPGVPGEDGIDGEQGVNGQDGQPGAPGAPGYHGMNGSPGT 475
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 36/78 (46%), Gaps = 14/78 (17%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMD--------------GIPGKDGLPGKDGIPGTNG 74
G G G +G PG PG G+PGRNG G+PG+DG PG DG G +G
Sbjct: 462 GAPGYHGMNGSPGTPGKPGLPGRNGQSCKSIPGPPGQPGVMGVPGRDGDPGTDGEHGQDG 521
Query: 75 TKTDHYAMGADTKSFSDG 92
+ G D S DG
Sbjct: 522 SPGIQGPPGRDGTSGPDG 539
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
G +G+ GRDG PG G G G G+ G PG+DG G DG PG +
Sbjct: 500 GVMGVPGRDGDPGTDGEHGQDGSPGIQGPPGRDGTSGPDGQPGVSA 545
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 27/47 (57%)
Query: 38 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGA 84
G PGE G DG PG G DGI G+ G+ G+DG PG G H G+
Sbjct: 426 GPPGERGPDGTPGVPGEDGIDGEQGVNGQDGQPGAPGAPGYHGMNGS 472
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG--KDGIPGTNG 74
G G DG G G PG+ G PGR DG G DG PG G PGT+G
Sbjct: 509 GDPGTDGEHGQDGSPGIQGPPGR---DGTSGPDGQPGVSAPGAPGTDG 553
>sp|P17140|CO4A2_CAEEL Collagen alpha-2(IV) chain OS=Caenorhabditis elegans GN=let-2 PE=1
SV=2
Length = 1758
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 33/52 (63%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
I G+ G G G PG+ GL G PG G G PG+DGLPG+DG+PG G K D
Sbjct: 1084 IPGKAGRQGAPGSPGQDGLPGFPGMKGESGYPGQDGLPGRDGLPGVPGQKGD 1135
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 9/74 (12%)
Query: 29 GRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKDGLP------GKDGIPGTNGTKTDH 79
G GL G+ G PGE GL G+PGR G G PG+DGLP G+DG+PG G
Sbjct: 865 GLPGLSGQPGYPGEKGDAGLPGVPGREGSPGFPGQDGLPGVPGMKGEDGLPGLPGVTGLK 924
Query: 80 YAMGADTKSFSDGV 93
+GA +S + G+
Sbjct: 925 GDLGAPGQSGAPGL 938
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 33 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADTKSFSDG 92
L G+DG PG PG G +G+ G+PG GL G+ G+PG G K D A G K DG
Sbjct: 1281 LQGKDGFPGLPGQKG---ESGLSGLPGAPGLKGESGMPGFPGAKGDLGANGIPGKRGEDG 1337
Query: 93 VLPSV 97
LP V
Sbjct: 1338 -LPGV 1341
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRN---GMDGIPGKDGLPGKDGIPGTNGTKTDH 79
+ G G G+DGLPG GL G+PG+ G G PG G PG DG PG G + D
Sbjct: 1108 MKGESGYPGQDGLPGRDGLPGVPGQKGDLGQSGQPGLSGAPGLDGQPGVPGIRGDK 1163
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 9/58 (15%)
Query: 27 ISGRIGLDGRDGLPGEPGL------DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
+ G GL G G+PG PG +GIPG+ G DG+P G+PG+DG PG G K +
Sbjct: 1302 LPGAPGLKGESGMPGFPGAKGDLGANGIPGKRGEDGLP---GVPGRDGQPGIPGLKGE 1356
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 30/55 (54%)
Query: 20 GRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
GR I G G G GLPG+PG GIPG G G+PG G G+ G PGT G
Sbjct: 1343 GRDGQPGIPGLKGEVGGAGLPGQPGFPGIPGLKGEGGLPGFPGAKGEAGFPGTPG 1397
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
+G G G G PG PG DG+PG G+ G G G PG++G+PG +G K
Sbjct: 1204 FAGTPGFPGLKGSPGYPGQDGLPGIPGLKGDSGFPGQPGQEGLPGLSGEK 1253
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%)
Query: 24 STVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
+ G+ GL GRDGLPG PG G G++G G+ G GL G+ G+PG G K
Sbjct: 1111 ESGYPGQDGLPGRDGLPGVPGQKGDLGQSGQPGLSGAPGLDGQPGVPGIRGDK 1163
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 32 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK--DGIPGTNGTKTDHYAMGADTKSF 89
GL G+DG +PGLDG PGR G +G+PG G PG +G+PG G + G D +
Sbjct: 460 GLPGKDG---KPGLDGAPGRKGENGLPGVRGPPGDSLNGLPGAPGQRGAPGPNGYDGRDG 516
Query: 90 SDGV 93
+G+
Sbjct: 517 VNGL 520
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 35/74 (47%)
Query: 20 GRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDH 79
G+ S G G G GLPG PGL+G G G G+ G DGLPG G PG G K D
Sbjct: 823 GQPGSPGFPGLKGDAGLPGLPGTPGLEGQRGFPGAPGLKGGDGLPGLSGQPGYPGEKGDA 882
Query: 80 YAMGADTKSFSDGV 93
G + S G
Sbjct: 883 GLPGVPGREGSPGF 896
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 30/52 (57%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
+G G G DGLPG PG DG PG G+ G G GLPG+ G PG G K +
Sbjct: 1326 ANGIPGKRGEDGLPGVPGRDGQPGIPGLKGEVGGAGLPGQPGFPGIPGLKGE 1377
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADT 86
G GL G G PG+PG G+PG G G G G PG+DG+PG G K + G D
Sbjct: 1061 FKGETGLPGY-GQPGQPGEKGLPGIPGKAGRQGAPGSPGQDGLPGFPGMKGESGYPGQDG 1119
Query: 87 KSFSDGVLPSV 97
DG LP V
Sbjct: 1120 LPGRDG-LPGV 1129
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 15 DRRDIGRAISTVISGRIGLDGRDGLPGEPGL---DGIPGRNGMDGIPGKDGLPGKDGIPG 71
++ D G G G G+DGLPG PG+ DG+PG G+ G+ G G PG+ G PG
Sbjct: 878 EKGDAGLPGVPGREGSPGFPGQDGLPGVPGMKGEDGLPGLPGVTGLKGDLGAPGQSGAPG 937
Query: 72 TNGT 75
G
Sbjct: 938 LPGA 941
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 9/59 (15%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGI------PGRNGMDGIPGKDGLP---GKDGIPGTNGTK 76
+ G G+ G DGLPG PG+ G+ PG++G G+PG G P G GIPG G K
Sbjct: 902 LPGVPGMKGEDGLPGLPGVTGLKGDLGAPGQSGAPGLPGAPGYPGMKGNAGIPGVPGFK 960
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 20 GRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMD---GIPGKDGLPGKDGIPGTNGTK 76
GR S G+ GL G G+ GE GL G+PG G+ G PG+ G PG G PG G K
Sbjct: 889 GREGSPGFPGQDGLPGVPGMKGEDGLPGLPGVTGLKGDLGAPGQSGAPGLPGAPGYPGMK 948
Query: 77 TD 78
+
Sbjct: 949 GN 950
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 40 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDH 79
PG+PGL G+PG G G PG+ G G+ G PG G K D
Sbjct: 727 PGQPGLPGLPGTKGEGGYPGRPGEVGQPGFPGLPGMKGDS 766
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 26/50 (52%)
Query: 34 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMG 83
D +GLPG PG G PG NG DG G +GLPG G G G A G
Sbjct: 491 DSLNGLPGAPGQRGAPGPNGYDGRDGVNGLPGAPGTKGDRGGTCSACAPG 540
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 26/48 (54%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
G GL G+ G PG PGL G G G G G+ G PG G+PG G K
Sbjct: 1358 GGAGLPGQPGFPGIPGLKGEGGLPGFPGAKGEAGFPGTPGVPGYAGEK 1405
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 44/103 (42%), Gaps = 39/103 (37%)
Query: 16 RRDIGRAISTVISGRIGLDGRDGLPG------EPGLDGIPGRNGMDG------------- 56
+ D+G++ +SG GLDG+ G+PG + GL GIPG GMDG
Sbjct: 1133 KGDLGQSGQPGLSGAPGLDGQPGVPGIRGDKGQGGLPGIPGDRGMDGYPGQKGENGYPGQ 1192
Query: 57 --------------IPGKDGL------PGKDGIPGTNGTKTDH 79
PG GL PG+DG+PG G K D
Sbjct: 1193 PGLPGLGGEKGFAGTPGFPGLKGSPGYPGQDGLPGIPGLKGDS 1235
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 9/56 (16%)
Query: 29 GRIGLDGRDGLPGEPGLDG------IPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
G G+ GRDG PG PGL G +PG+ G GIP GL G+ G+PG G K +
Sbjct: 1337 GLPGVPGRDGQPGIPGLKGEVGGAGLPGQPGFPGIP---GLKGEGGLPGFPGAKGE 1389
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 16 RRDIGRAISTVISGRIGLDGR--DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 73
+ D+G ++G+ G G G PG PG G+ G G+ G+PG GL G+ G PG
Sbjct: 799 KGDVGNPGLPGLNGQKGEPGVGVPGQPGSPGFPGLKGDAGLPGLPGTPGLEGQRGFPGAP 858
Query: 74 GTK 76
G K
Sbjct: 859 GLK 861
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMD---GIPGKDGLPGKDGIPGTNG 74
+ G+ G G GL G+ GL G+PG G++ G PG GL G DG+PG +G
Sbjct: 821 VPGQPGSPGFPGLKGDAGLPGLPGTPGLEGQRGFPGAPGLKGGDGLPGLSG 871
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADTKS 88
G GL G +G GEPG+ G+PG+ G G PG G G G+PGT G + GA
Sbjct: 803 GNPGLPGLNGQKGEPGV-GVPGQPGSPGFPGLKGDAGLPGLPGTPGLEGQRGFPGAPGLK 861
Query: 89 FSDGV 93
DG+
Sbjct: 862 GGDGL 866
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 30/70 (42%), Gaps = 18/70 (25%)
Query: 25 TVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL------------------PGK 66
T + G +G G+ G PG PG G PG G GIPG G PG
Sbjct: 921 TGLKGDLGAPGQSGAPGLPGAPGYPGMKGNAGIPGVPGFKGDGGLPGLPGLNGPKGEPGV 980
Query: 67 DGIPGTNGTK 76
G+PGT G K
Sbjct: 981 PGMPGTPGMK 990
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 23/42 (54%)
Query: 35 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
G G PGE G G PG G G PG GL G+ G+PG G K
Sbjct: 253 GPRGNPGEKGDKGEPGEGGQRGYPGNGGLSGQPGLPGMKGEK 294
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 30 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPG---KDGLPGKDGIPGTNGTK 76
R G G GLPG+PGL G G +G+ G+PG + GLPG G PG G K
Sbjct: 1031 RDGQKGDAGLPGQPGLRGPQGPSGLPGVPGFKGETGLPGY-GQPGQPGEK 1079
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 15/65 (23%)
Query: 29 GRIGLDGRDGLPGEPGLD---------------GIPGRNGMDGIPGKDGLPGKDGIPGTN 73
G GL G +G PG+PG+D G PG G G+PG G PG+DG+PG
Sbjct: 616 GYPGLKGENGFPGQPGVDGLPGPSGPVGPPGAPGYPGEKGDAGLPGLSGKPGQDGLPGLP 675
Query: 74 GTKTD 78
G K +
Sbjct: 676 GNKGE 680
>sp|P13941|CO3A1_RAT Collagen alpha-1(III) chain OS=Rattus norvegicus GN=Col3a1 PE=2
SV=3
Length = 1463
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 35/63 (55%)
Query: 12 EVHDRRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 71
E R + G A S I G G DG+DG PGEPG +G+PG G G PG G G +G PG
Sbjct: 441 EPGARGERGEAGSPGIPGPKGEDGKDGSPGEPGANGVPGNPGERGAPGFRGPAGPNGAPG 500
Query: 72 TNG 74
G
Sbjct: 501 EKG 503
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 31/56 (55%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMG 83
+G+ G GR G PGE GL G PG G GIPG G+ G G G NG K + A G
Sbjct: 226 AGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPG 281
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 27/49 (55%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 75
I G G G +G PGEPG G G G+ G G G PG+ G PGT GT
Sbjct: 642 IPGTSGPPGENGKPGEPGPKGEAGAPGVPGGKGDSGAPGERGPPGTAGT 690
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 32/63 (50%), Gaps = 15/63 (23%)
Query: 28 SGRIGLDGRDGLPGEPGLDG---IPG------------RNGMDGIPGKDGLPGKDGIPGT 72
SGR G G GLPG PG+ G IPG RNG G G GL G++G+PG
Sbjct: 232 SGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGD 291
Query: 73 NGT 75
NG
Sbjct: 292 NGA 294
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADTKS 88
G G G +G PG+ G G PG+NG G PG G G+ G PG G K + G+ +
Sbjct: 413 GPPGPAGANGAPGQRGPSGEPGKNGAKGEPGARGERGEAGSPGIPGPKGEDGKDGSPGEP 472
Query: 89 FSDGV 93
++GV
Sbjct: 473 GANGV 477
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 9/68 (13%)
Query: 27 ISGRIGLDGRDGLPGE---PGL---DGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTKT 77
+ G G DGR+G GE PGL +G+PG NG G G G P G+ G+PG G +
Sbjct: 261 MKGHRGFDGRNGEKGETGAPGLKGENGLPGDNGAPGPMGPRGAPGERGRPGLPGAAGARG 320
Query: 78 DHYAMGAD 85
+ A G+D
Sbjct: 321 NDGARGSD 328
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Query: 28 SGRIGLDGRDGLPG------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
SG G +G G PG E G GIPG G DG G G PG +G+PG G +
Sbjct: 430 SGEPGKNGAKGEPGARGERGEAGSPGIPGPKGEDGKDGSPGEPGANGVPGNPGER 484
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 22/37 (59%)
Query: 47 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMG 83
G PG G+ GIPG G PG++G PG G K + A G
Sbjct: 632 GPPGPQGLQGIPGTSGPPGENGKPGEPGPKGEAGAPG 668
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 23/46 (50%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
G G G GL G PG G PG NG G PG G G G+PG G
Sbjct: 629 GDAGPPGPQGLQGIPGTSGPPGENGKPGEPGPKGEAGAPGVPGGKG 674
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
I G GL G G PG G +G PG+ G G PGK+G G+ G G G
Sbjct: 402 IPGAPGLLGARGPPGPAGANGAPGQRGPSGEPGKNGAKGEPGARGERG 449
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 35 GRDGLPGEPGL---DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADTKSFSD 91
G G+PG PGL G PG G +G PG+ G G PG NG K + A G ++ S
Sbjct: 398 GPAGIPGAPGLLGARGPPGPAGANGAPGQR---GPSGEPGKNGAKGEPGARGERGEAGSP 454
Query: 92 GV 93
G+
Sbjct: 455 GI 456
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 50 GRNGMDGIPGKDGLPGKDGIPGTNGTKTDH 79
G G DG PG DG PG+DG PG G + ++
Sbjct: 1007 GEPGRDGNPGSDGQPGRDGSPGGKGDRGEN 1036
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%)
Query: 18 DIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 73
+ G + + G GL G +G PG G G PG G G+PG G G DG G++
Sbjct: 273 EKGETGAPGLKGENGLPGDNGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSD 328
>sp|D8VNS8|FCNV2_CERRY Ryncolin-2 OS=Cerberus rynchops PE=1 SV=1
Length = 347
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 30 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK---DGIPGTNG 74
+I L + G+PG PG+ GI G G+ G PG GLPG+ DGIPG G
Sbjct: 46 KIILQSQPGIPGIPGVPGINGSEGLKGDPGPQGLPGETGFDGIPGVAG 93
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 62
I G G++G +GL G+PG G+PG G DGIPG G
Sbjct: 58 IPGVPGINGSEGLKGDPGPQGLPGETGFDGIPGVAG 93
>sp|P02461|CO3A1_HUMAN Collagen alpha-1(III) chain OS=Homo sapiens GN=COL3A1 PE=1 SV=4
Length = 1466
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 38/72 (52%)
Query: 12 EVHDRRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 71
E R + G A + G G DG+DG PGEPG +G+PG G G PG G G +GIPG
Sbjct: 442 EPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPG 501
Query: 72 TNGTKTDHYAMG 83
G + A G
Sbjct: 502 EKGPAGERGAPG 513
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 31/56 (55%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMG 83
+G+ G GR G PGE GL G PG G GIPG G+ G G G NG K + A G
Sbjct: 227 AGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPG 282
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 32/63 (50%), Gaps = 15/63 (23%)
Query: 28 SGRIGLDGRDGLPGEPGLDG---IPG------------RNGMDGIPGKDGLPGKDGIPGT 72
SGR G G GLPG PG+ G IPG RNG G G GL G++G+PG
Sbjct: 233 SGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGE 292
Query: 73 NGT 75
NG
Sbjct: 293 NGA 295
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTKTDHYAMG 83
GR G G G PG G +G+PG NG G G G P G+ G+PG G + + A G
Sbjct: 268 FDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARG 327
Query: 84 AD 85
+D
Sbjct: 328 SD 329
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 27/50 (54%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
+ G G G++G GEPG G G G+ G+PG G GKDG PG G
Sbjct: 427 LRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGAN 476
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 47 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDH 79
G G G DG PG DGLPG+DG PG G + ++
Sbjct: 1005 GTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGEN 1037
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 28 SGRIGLDGRDGLPG------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
+G G +G G PG E G+ G+PG G DG G G PG +G+PG G +
Sbjct: 431 AGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGER 485
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADTKS 88
G G G +G PG G G PG+NG G PG G G+ GIPG G K + G+ +
Sbjct: 414 GPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEP 473
Query: 89 FSDGV 93
++G+
Sbjct: 474 GANGL 478
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%)
Query: 18 DIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 73
+ G + + G GL G +G PG G G PG G G+PG G G DG G++
Sbjct: 274 EKGETGAPGLKGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSD 329
>sp|Q30D77|COOA1_MOUSE Collagen alpha-1(XXIV) chain OS=Mus musculus GN=Col24a1 PE=2 SV=2
Length = 1733
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 31/48 (64%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 75
SG+ G+ G G PG GL G PG +GM G PGK GLPGK G+ G G+
Sbjct: 1294 SGKPGIPGVPGFPGPKGLQGYPGVDGMSGYPGKPGLPGKQGLLGVPGS 1341
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNG 74
G+ G+ G G PG PG+ G PG G+ G PG DG+ PGK G+PG G
Sbjct: 1285 QGKRGVPGPSGKPGIPGVPGFPGPKGLQGYPGVDGMSGYPGKPGLPGKQG 1334
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD------GIPGTNG 74
+G G G G PG PG +G+ G++G+ G PG GLPG+D G+PGT G
Sbjct: 1056 AGATGEPGPRGEPGAPGEEGLQGKDGLKGAPGGSGLPGEDGDKGEMGLPGTAG 1108
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
+ G G+DG G PG+PGL PG+ G+ G+PG G G G PG G K
Sbjct: 1311 LQGYPGVDGMSGYPGKPGL---PGKQGLLGVPGSPGRTGVAGSPGPQGGK 1357
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 27/48 (56%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
I G G G GL G PG+DG+ G G G+PGK GL G G PG G
Sbjct: 1299 IPGVPGFPGPKGLQGYPGVDGMSGYPGKPGLPGKQGLLGVPGSPGRTG 1346
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 23/40 (57%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 68
G G G+ GLPG PG G PG G+ G PG GLPG G
Sbjct: 964 GEKGNQGKRGLPGLPGKAGSPGERGVQGKPGFQGLPGSSG 1003
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 27 ISGRIGLDGRDGLPG---EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
+ G GL G GLPG E GL G+ G G G PG+ GL G +G PG+ G +
Sbjct: 584 LQGAKGLKGHPGLPGLRGEHGLPGLAGNIGSPGYPGRQGLAGPEGNPGSKGVR 636
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 32/60 (53%), Gaps = 12/60 (20%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGI------------PGKDGLPGKDGIPGTNGTK 76
G GL G+DGL G PG G+PG +G G PG+ GLPG +GI GT G +
Sbjct: 1072 GEEGLQGKDGLKGAPGGSGLPGEDGDKGEMGLPGTAGPVGRPGQMGLPGPEGIVGTPGQR 1131
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 32 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTKTD 78
G G G GEPG G PG G +G+ GKDGL PG G+PG +G K +
Sbjct: 1051 GPAGSAGATGEPGPRGEPGAPGEEGLQGKDGLKGAPGGSGLPGEDGDKGE 1100
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 9/61 (14%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNG---------MDGIPGKDGLPGKDGIPGTNGTKT 77
+ G+ G G G+ G+PG G+PG +G G+PG GLPG+ G+ G GT+
Sbjct: 977 LPGKAGSPGERGVQGKPGFQGLPGSSGDVGPAGEPGPRGLPGIAGLPGEMGVEGPPGTEG 1036
Query: 78 D 78
D
Sbjct: 1037 D 1037
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
SG +G G G G PG+ G+PG G++G PG +G G G PG G
Sbjct: 1002 SGDVGPAGEPGPRGLPGIAGLPGEMGVEGPPGTEGDSGLQGEPGAKG 1048
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 68
G GL G+ G+PG+ G G PG G+ G PG G PG+ G
Sbjct: 1373 GEQGLPGQPGVPGQRGHRGTPGDQGLRGAPGLKGQPGEHG 1412
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 12/60 (20%)
Query: 27 ISGRIGLDGRDGLPGEPGLD------------GIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
+ G G +G GL GEPG G PG G G PG++GL GKDG+ G G
Sbjct: 1028 VEGPPGTEGDSGLQGEPGAKGDGGPAGSAGATGEPGPRGEPGAPGEEGLQGKDGLKGAPG 1087
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 35 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDH 79
G GLPG+PG +PG+ G G PG GL G G+ G G D
Sbjct: 1373 GEQGLPGQPG---VPGQRGHRGTPGDQGLRGAPGLKGQPGEHGDQ 1414
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 24/74 (32%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGI---PGRNGMDGIP---------------------GKDG 62
+ G G G+ GLPG+ GL G+ PGR G+ G P G+ G
Sbjct: 1317 VDGMSGYPGKPGLPGKQGLLGVPGSPGRTGVAGSPGPQGGKGASGPPGSPGAPGPKGEQG 1376
Query: 63 LPGKDGIPGTNGTK 76
LPG+ G+PG G +
Sbjct: 1377 LPGQPGVPGQRGHR 1390
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADTKS 88
G GL G GLPG G G PG G G+ G +G PG G+ G G+ + +G + +
Sbjct: 595 GLPGLRGEHGLPGLAGNIGSPGYPGRQGLAGPEGNPGSKGVRGFIGSPGEVGQLGPEGER 654
Query: 89 FSDGV 93
+ GV
Sbjct: 655 GTPGV 659
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 23/47 (48%)
Query: 32 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
G G G PG+ GL G PG G G G GL G G PG G + D
Sbjct: 1385 GQRGHRGTPGDQGLRGAPGLKGQPGEHGDQGLAGFQGFPGPRGPEGD 1431
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 67
G +G +G G+PG G G PG +G+ G G+ G PG+D
Sbjct: 1177 GLMGPEGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGED 1215
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 9/59 (15%)
Query: 27 ISGRIGLDGRDGLPGEPG---------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
+ G G G+ G PGEPG G G G G+PG G PG G+PG G K
Sbjct: 1251 VPGLRGATGQQGPPGEPGDQGGQGPKGERGSEGPQGKRGVPGPSGKPGIPGVPGFPGPK 1309
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 24/47 (51%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
G+ GL G G G PG G+ G+ G G+PG G G G PG G
Sbjct: 969 QGKRGLPGLPGKAGSPGERGVQGKPGFQGLPGSSGDVGPAGEPGPRG 1015
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 23/46 (50%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
G G G GL G PGL G PG +G G+ G G PG G G G
Sbjct: 1388 GHRGTPGDQGLRGAPGLKGQPGEHGDQGLAGFQGFPGPRGPEGDAG 1433
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 25/48 (52%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
G+ G G DGL G+ G G G G G G GLPGK G PG G +
Sbjct: 943 GQRGPRGPDGLAGDQGGHGAKGEKGNQGKRGLPGLPGKAGSPGERGVQ 990
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 22/41 (53%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 68
SG G G G+ GEPG G PG G G PG G+ GK G
Sbjct: 729 SGIKGDKGEQGVAGEPGEPGYPGDKGNIGSPGPPGIRGKSG 769
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 32 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 75
GL G GLPGE G++G PG G G+ G+ G G G G+ G
Sbjct: 1015 GLPGIAGLPGEMGVEGPPGTEGDSGLQGEPGAKGDGGPAGSAGA 1058
>sp|A6NMZ7|CO6A6_HUMAN Collagen alpha-6(VI) chain OS=Homo sapiens GN=COL6A6 PE=1 SV=2
Length = 2263
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 29/49 (59%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
G +G +G DGL GE G +G+PGR G G G G PGK G PG G K
Sbjct: 1457 EGEVGENGIDGLNGEQGDNGLPGRKGEKGDEGSQGSPGKRGTPGDRGAK 1505
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGA 84
G G G G G GL+G G G +GI G +G G +G+PG G K D + G+
Sbjct: 1437 GTKGCYGTKGPKGNRGLNGQEGEVGENGIDGLNGEQGDNGLPGRKGEKGDEGSQGS 1492
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD-GIPGTNGTK 76
+ GR G G +G G PG G PG G G+ G G PG D I G G K
Sbjct: 1477 LPGRKGEKGDEGSQGSPGKRGTPGDRGAKGLRGDPGAPGVDSSIEGPTGLK 1527
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 71
GR+G G G PG+ G G G PG GL G DG PG
Sbjct: 1618 GRLGSQGNKGEPGDLG------EKGAVGFPGPRGLQGNDGSPG 1654
>sp|P27393|CO4A2_ASCSU Collagen alpha-2(IV) chain OS=Ascaris suum PE=2 SV=1
Length = 1763
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 33/55 (60%)
Query: 20 GRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
G A + I G GL G G GEPGL GIPG+ G DGIPGK G G G+PG G
Sbjct: 1303 GYAGAAGIKGEPGLPGIPGAKGEPGLSGIPGKRGNDGIPGKPGPAGLPGLPGMKG 1357
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%)
Query: 16 RRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 75
+ + G + + G GL G G+ G PGL G PG G+ GIPG+ G+ GK G+PG G
Sbjct: 741 KGEAGFPGAPGLQGPAGLPGLPGMKGNPGLPGAPGLAGLPGIPGEKGIAGKPGLPGLTGA 800
Query: 76 KTD 78
K +
Sbjct: 801 KGE 803
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK------DGLPGKDGIPGTNGTKTD 78
+ G GL G GLPG+ GL G+PG+ G G PG+ GLPGK G PG G K D
Sbjct: 1110 LKGEAGLPGAPGLPGQDGLPGLPGQKGESGFPGQPGLVGPPGLPGKMGAPGIRGEKGD 1167
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDG---IPGKDGLPGKDGIPGTNGTKTDH 79
+ G G GR G PG GLDG PG G+ G +PG GLPG+DG+PG G K +
Sbjct: 1083 LPGLPGKPGRPGAPGPKGLDGAPGFPGLKGEAGLPGAPGLPGQDGLPGLPGQKGES 1138
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 31/52 (59%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDH 79
+G GL G G GE GL G+PG GM G PG G PG+DG+PG G K D
Sbjct: 965 AGLPGLPGAPGQKGEQGLAGLPGIPGMKGAPGIPGAPGQDGLPGLPGVKGDR 1016
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 34/65 (52%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADTK 87
SG G G GLPG PGL G PG G G G+ G PG+ GIPG G K D GA +
Sbjct: 1359 SGLPGPQGPAGLPGLPGLKGEPGLPGFPGQKGETGFPGQPGIPGLPGMKGDSGYPGAPGR 1418
Query: 88 SFSDG 92
+ G
Sbjct: 1419 DGAPG 1423
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 38/75 (50%), Gaps = 15/75 (20%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD-----------GLPGKDGIPGTNGTK 76
+G G GRDGLPG PG+ G G G+ G PGK GLPGKDG+PG G K
Sbjct: 1237 AGLPGAPGRDGLPGLPGMKGEAGLPGLPGQPGKSITGPKGNAGLPGLPGKDGLPGLPGLK 1296
Query: 77 TDH----YAMGADTK 87
+ YA A K
Sbjct: 1297 GEPGKPGYAGAAGIK 1311
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 33 LDGRDGLPGEPGLDGIPGRNGMDGIPGKD---GLPGKDGIPGTNGTKTD 78
L G+DG+PG PGL G+ G+ G+ G+PG+ GLPG G PG G K +
Sbjct: 835 LKGKDGIPGAPGLPGLEGQRGLPGVPGQKGEIGLPGLAGAPGFPGAKGE 883
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 29/47 (61%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
+G GL G+DGLPG PGL G PG+ G G G G PG GIPG G
Sbjct: 1278 AGLPGLPGKDGLPGLPGLKGEPGKPGYAGAAGIKGEPGLPGIPGAKG 1324
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 30/51 (58%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
+G G G G PG PGL+G PG GM G G G PG+DG+PG G K +
Sbjct: 1207 AGAPGFPGLKGEPGLPGLEGQPGPRGMKGEAGLPGAPGRDGLPGLPGMKGE 1257
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 32/56 (57%)
Query: 20 GRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 75
G+ + I G G G GLPGE GLDG+PG+ G G PG GLPG G G+ G
Sbjct: 1154 GKMGAPGIRGEKGDAGLPGLPGERGLDGLPGQKGEAGFPGAPGLPGPVGPKGSAGA 1209
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 31 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTKTDHYAMGA 84
G G GLPG PG DG+PG G+ G PGK G+ G+ G+PG G K + G
Sbjct: 1272 TGPKGNAGLPGLPGKDGLPGLPGLKGEPGKPGYAGAAGIKGEPGLPGIPGAKGEPGLSGI 1331
Query: 85 DTKSFSDGV 93
K +DG+
Sbjct: 1332 PGKRGNDGI 1340
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 35/61 (57%), Gaps = 9/61 (14%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIP---GRNGMDGIPGK---DGLPGKD---GIPGTNGTKTD 78
G+ G G G+ GEPGL GIP G G+ GIPGK DG+PGK G+PG G K +
Sbjct: 1299 PGKPGYAGAAGIKGEPGLPGIPGAKGEPGLSGIPGKRGNDGIPGKPGPAGLPGLPGMKGE 1358
Query: 79 H 79
Sbjct: 1359 S 1359
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD---GLPGKDGIPGTNGTKTDHYAMG 83
+ G++G G G G+ GL G+PG G+DG+PG+ G PG G+PG G K A G
Sbjct: 1152 LPGKMGAPGIRGEKGDAGLPGLPGERGLDGLPGQKGEAGFPGAPGLPGPVGPKGSAGAPG 1211
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
I G+ G G GLPG G G+PG G G+PG GL G+ G+PG G K +
Sbjct: 1340 IPGKPGPAGLPGLPGMKGESGLPGPQGPAGLPGLPGLKGEPGLPGFPGQKGE 1391
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
+ G GL G G+PGE G+ G PG G+ G G+ G PG+ G+PG G
Sbjct: 770 LPGAPGLAGLPGIPGEKGIAGKPGLPGLTGAKGEAGYPGQPGLPGPKG 817
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 19 IGRAISTVISGRIGLDGRDGLPG---EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
+G S G GL G GLPG +PG G+ G G+ G PG+DGLPG G+ G G
Sbjct: 1201 VGPKGSAGAPGFPGLKGEPGLPGLEGQPGPRGMKGEAGLPGAPGRDGLPGLPGMKGEAG 1259
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 72
+ G G+ G G+PG PG DG+PG G+ G G +GLPG+ G PG
Sbjct: 985 LPGIPGMKGAPGIPGAPGQDGLPGLPGVKGDRGFNGLPGEKGEPGP 1030
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 27 ISGRIGLDGRDGLPGEPGLD---GIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
+ G G G G PG PGL G+PG GM G PG G PG G+PG G K
Sbjct: 734 LPGLPGPKGEAGFPGAPGLQGPAGLPGLPGMKGNPGLPGAPGLAGLPGIPGEK 786
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 27 ISGRIGLDGRDGLPGEP---GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
+SG G G DG+PG+P GL G+PG G G+PG G G G+PG G
Sbjct: 1328 LSGIPGKRGNDGIPGKPGPAGLPGLPGMKGESGLPGPQGPAGLPGLPGLKG 1378
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 27/49 (55%)
Query: 36 RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGA 84
R G PG+ GL G+PG G G PG GL G G+PG G K + GA
Sbjct: 725 RPGPPGKDGLPGLPGPKGEAGFPGAPGLQGPAGLPGLPGMKGNPGLPGA 773
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 28 SGRIGLDGRDGLPG---EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
G GLDG G PG E GL G PG G DG+PG G G+ G PG G
Sbjct: 1096 PGPKGLDGAPGFPGLKGEAGLPGAPGLPGQDGLPGLPGQKGESGFPGQPG 1145
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 20 GRAISTVISGRIGLDGRDGLPGEP------GLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 73
G A + G+ GL G GL GEP G GI G G+ GIPG G PG GIPG
Sbjct: 1276 GNAGLPGLPGKDGLPGLPGLKGEPGKPGYAGAAGIKGEPGLPGIPGAKGEPGLSGIPGKR 1335
Query: 74 GT 75
G
Sbjct: 1336 GN 1337
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 27/47 (57%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
G G G DG PG PGL G G G G+PG+DGLPG G G +G
Sbjct: 1093 PGAPGPKGLDGAPGFPGLKGEAGLPGAPGLPGQDGLPGLPGQKGESG 1139
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%)
Query: 20 GRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
G A + G G G GL G PG+ G+ G G+ G PG+DGLPG G+ G G
Sbjct: 963 GEAGLPGLPGAPGQKGEQGLAGLPGIPGMKGAPGIPGAPGQDGLPGLPGVKGDRG 1017
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Query: 27 ISGRIGLDGRDGLPG------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
+ G GL G +G PG E GL G PGR+G+ G+PG G G G+PG G
Sbjct: 1215 LKGEPGLPGLEGQPGPRGMKGEAGLPGAPGRDGLPGLPGMKGEAGLPGLPGQPG 1268
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 30 RIGLDGRDGLPGEPG------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
R G G+DGLPG PG G PG G G+PG G+ G G+PG G
Sbjct: 725 RPGPPGKDGLPGLPGPKGEAGFPGAPGLQGPAGLPGLPGMKGNPGLPGAPG 775
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 28 SGRIGLDGRDGLPGEPGLD---GIPGRNGMDGIPGKDGLPGKDGIPGTN 73
G GL+G+ GLPG PG G+PG G G PG G PG G+PG
Sbjct: 845 PGLPGLEGQRGLPGVPGQKGEIGLPGLAGAPGFPGAKGEPGLPGLPGKE 893
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 35 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADTKSFSDGV 93
G GL GE GL G+PG+ G G PG GL DG PG G K + GA DG+
Sbjct: 1073 GAPGLMGEKGLPGLPGKPGRPGAPGPKGL---DGAPGFPGLKGEAGLPGAPGLPGQDGL 1128
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
G GL G G+ G PG+ G PG++G+ G+PG G G +G+PG G
Sbjct: 980 QGLAGLPGIPGMKGAPGIPGAPGQDGLPGLPGVKGDRGFNGLPGEKG 1026
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 25/48 (52%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
+ G GL G GLPG PG G G G GIPG G+ G G PG G
Sbjct: 1370 LPGLPGLKGEPGLPGFPGQKGETGFPGQPGIPGLPGMKGDSGYPGAPG 1417
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Query: 32 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 65
GL G+DG PGLDG+PGR G G+PG G PG
Sbjct: 462 GLPGKDG---RPGLDGLPGRKGEMGLPGVRGPPG 492
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 31/65 (47%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADTKS 88
G GL G G+PG G GIPG G DG+PG G+ G G G G K + D +
Sbjct: 978 GEQGLAGLPGIPGMKGAPGIPGAPGQDGLPGLPGVKGDRGFNGLPGEKGEPGPAARDGEK 1037
Query: 89 FSDGV 93
G+
Sbjct: 1038 GEPGL 1042
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 25/48 (52%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
+ G G G G PG PGL G G G G PG GL G+ G+PG G
Sbjct: 1179 LDGLPGQKGEAGFPGAPGLPGPVGPKGSAGAPGFPGLKGEPGLPGLEG 1226
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 24/68 (35%)
Query: 35 GRDGLPGEPGLDGIPGRNGMDGIPGKDGL------------------------PGKDGIP 70
G G PG+ G G PG G +G+PGK G+ PGKDGIP
Sbjct: 615 GPPGYPGQKGETGFPGPRGQEGLPGKPGIVGAPGLPGPPGPKGEPGLTGLPEKPGKDGIP 674
Query: 71 GTNGTKTD 78
G G K +
Sbjct: 675 GLPGLKGE 682
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 32 GLDGRDGLPGEPG------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
G G+DGLPG PG +G+PG G G +DG G+ G+PG G +
Sbjct: 999 GAPGQDGLPGLPGVKGDRGFNGLPGEKGEPGPAARDGEKGEPGLPGQPGLR 1049
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 17/60 (28%)
Query: 32 GLDGRDGLPGEPGLD------------GIPGRNGMD-----GIPGKDGLPGKDGIPGTNG 74
G G G+PG PG+ G PG G+D G+PGKDG PG DG+PG G
Sbjct: 421 GEKGDSGIPGAPGVQGPPGLAGPPGAKGEPGPRGVDGQSIPGLPGKDGRPGLDGLPGRKG 480
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 34/81 (41%), Gaps = 20/81 (24%)
Query: 18 DIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGR-----------------NGMDGIPGK 60
+ G A + G G G G PG+PGL G G G DGIPG
Sbjct: 785 EKGIAGKPGLPGLTGAKGEAGYPGQPGLPGPKGEPGPSTTGPPGPPGFPGLKGKDGIPGA 844
Query: 61 DGLPG---KDGIPGTNGTKTD 78
GLPG + G+PG G K +
Sbjct: 845 PGLPGLEGQRGLPGVPGQKGE 865
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 32 GLDGRDGLPGEPGLDGIPGRNGMDGIPG 59
G GRDG PG+PG+ G G G+ G PG
Sbjct: 1479 GAKGRDGFPGQPGMPGEKGAPGLPGFPG 1506
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 22 AISTVI--SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
A T+I G G+ G G PGE G G PG G+ G PG G+ G+ G+ G G +
Sbjct: 249 AKGTIIGPEGAPGMKGEKGDPGEAGPRGFPGTPGVAGQPGLPGMKGEKGLSGPAGPR 305
>sp|P04258|CO3A1_BOVIN Collagen alpha-1(III) chain OS=Bos taurus GN=COL3A1 PE=1 SV=1
Length = 1049
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 16 RRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 71
R + G A S I+G G DG+DG PGEPG +G+PG G G+PG G G +G+PG
Sbjct: 290 RGERGEAGSPGIAGPKGEDGKDGSPGEPGANGLPGAAGERGVPGFRGPAGANGLPG 345
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 15/71 (21%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP------------GKDGIPGTNG 74
+ G G DGR+G GEPG G+ G N G+PG+DG P G+ G+PG G
Sbjct: 106 MKGHRGFDGRNGEKGEPGAPGLKGEN---GVPGEDGAPGPMGPRGAPGERGRPGLPGAAG 162
Query: 75 TKTDHYAMGAD 85
+ + A G+D
Sbjct: 163 ARGNDGARGSD 173
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 44 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDH 79
G G PGR DG PG DGLPG+DG PG G + ++
Sbjct: 849 GTAGEPGR---DGNPGSDGLPGRDGAPGAKGDRGEN 881
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 47 GIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMG 83
G PG G+ G+PG G PG++G PG G K + A G
Sbjct: 477 GPPGPQGLQGLPGTSGPPGENGKPGEPGPKGEAGAPG 513
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 33 LDGRDGLPGEPGLDG---IPGRNGMDGIPGKDGLPGKDGIPGTNGT 75
+ G G+PG PG+ G GRNG G PG GL G++G+PG +G
Sbjct: 94 MKGPAGMPGFPGMKGHRGFDGRNGEKGEPGAPGLKGENGVPGEDGA 139
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 23/46 (50%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
G G G GL G PG G PG NG G PG G G GIPG G
Sbjct: 474 GDTGPPGPQGLQGLPGTSGPPGENGKPGEPGPKGEAGAPGIPGGKG 519
>sp|Q8BLX7|COGA1_MOUSE Collagen alpha-1(XVI) chain OS=Mus musculus GN=Col16a1 PE=2 SV=2
Length = 1580
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 30/54 (55%)
Query: 25 TVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
GR G G+DG PG PG G PG G G G+ GLPG G+PGT G K D
Sbjct: 1445 AAAPGRPGPPGKDGAPGRPGAPGSPGLPGQIGREGRQGLPGMRGLPGTKGEKGD 1498
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 37 DGLPGEPGLDGIPGRNGM--DGIPGKDGLPGKDGIPGTNGTKTD 78
GLPG+PG G PG G+ G PG+ GLPG G PG GT+ +
Sbjct: 747 SGLPGKPGPKGEPGPEGVGHPGKPGQPGLPGVQGPPGPKGTQGE 790
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 8/51 (15%)
Query: 31 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL--------PGKDGIPGTN 73
+G G+ G PG PG+ G PG G G PG G PG G+PGT
Sbjct: 764 VGHPGKPGQPGLPGVQGPPGPKGTQGEPGPPGTGAEGPQGEPGTQGLPGTQ 814
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 18 DIGRAISTVISG----RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 73
+ G S+ SG +G GLPG PG GIPG G+ G G G G G+PG+
Sbjct: 566 EKGEPCSSCSSGVGAQHLGPSPGHGLPGLPGTSGIPGPRGLKGEKGSFGDTGPAGVPGSP 625
Query: 74 G 74
G
Sbjct: 626 G 626
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 32 GLDGRDGLPGEPGLDGI-----PGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
GL G+ G GEPG +G+ PG+ G+ G+ G G G G PG GT +
Sbjct: 748 GLPGKPGPKGEPGPEGVGHPGKPGQPGLPGVQGPPGPKGTQGEPGPPGTGAE 799
>sp|Q07092|COGA1_HUMAN Collagen alpha-1(XVI) chain OS=Homo sapiens GN=COL16A1 PE=1 SV=2
Length = 1604
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 30/54 (55%)
Query: 25 TVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
GR G G+DG PG PG G PG G G G+ GLPG G+PGT G K D
Sbjct: 1469 AAAPGRPGPPGKDGAPGRPGAPGSPGLPGQIGREGRQGLPGVRGLPGTKGEKGD 1522
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 35 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGK 66
GR G PG+PGL G+ G G+ G+ G+ G PG+
Sbjct: 756 GRPGKPGQPGLPGVQGPPGLKGVQGEPGPPGR 787
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
Query: 31 IGLDGRDGLPGEPGLDGIPGRNGMDGIP--------GKDGLPGKDGIPG 71
+G G+ G PG PG+ G PG G+ G P G G PG G+PG
Sbjct: 755 VGRPGKPGQPGLPGVQGPPGLKGVQGEPGPPGRGVQGPQGEPGAPGLPG 803
>sp|Q801S8|CO6A1_XENLA Collagen alpha-1(VI) chain OS=Xenopus laevis GN=col6a1 PE=1 SV=1
Length = 1045
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
G GL G G+ GE G DG PG NG DG PG G PG G PG+NGTK
Sbjct: 517 GAKGLPGEQGIAGERGDDGRPG-NGTDGFPGFQGYPGSRGDPGSNGTK 563
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
G G G G G G+DG G +G +G+PG G PG DG PG++G K D
Sbjct: 337 GAKGSKGDKGKRGIDGVDGQKGEDGYNGLPGCKGSPGFDGAPGSSGPKGD 386
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 21/40 (52%)
Query: 32 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 71
G DG G G PG G PG NG G PG G G+ G PG
Sbjct: 540 GTDGFPGFQGYPGSRGDPGSNGTKGYPGPKGDEGEQGEPG 579
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 27 ISGRIGLDGRDGLPG---EPGLDGIPGRNGMDGIPGKDGLPGK 66
+ G+ G DG +GLPG PG DG PG +G G PG G G+
Sbjct: 353 VDGQKGEDGYNGLPGCKGSPGFDGAPGSSGPKGDPGPYGTKGE 395
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 30/57 (52%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGAD 85
G+ GL G GLPG+PG G G G G+ G G+ G+ G G G+K D G D
Sbjct: 295 GKPGLPGDRGLPGDPGRQGDIGPVGYQGMKGDQGIRGEKGGRGAKGSKGDKGKRGID 351
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
+G G G +GL GE G G G G DG PGK G G+ G PG +G
Sbjct: 414 TGDKGDPGSNGLAGEKGESGDEGDAGADGSPGKRGEAGELGPPGVSG 460
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 30/59 (50%)
Query: 35 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADTKSFSDGV 93
G+ GLPG+ GL G PGR G G G G+ G GI G G + + G K DGV
Sbjct: 295 GKPGLPGDRGLPGDPGRQGDIGPVGYQGMKGDQGIRGEKGGRGAKGSKGDKGKRGIDGV 353
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 27 ISGRIGLDGR--DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
I+G G DGR +G G PG G PG G G G G PG G G G D
Sbjct: 527 IAGERGDDGRPGNGTDGFPGFQGYPGSRGDPGSNGTKGYPGPKGDEGEQGEPGD 580
>sp|P02747|C1QC_HUMAN Complement C1q subcomponent subunit C OS=Homo sapiens GN=C1QC
PE=1 SV=3
Length = 245
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 27/42 (64%)
Query: 35 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
G G+PG PGL G PG++G DG+PG G PG IPG G K
Sbjct: 31 GCYGIPGMPGLPGAPGKDGYDGLPGPKGEPGIPAIPGIRGPK 72
>sp|P31722|C1QC_RAT Complement C1q subcomponent subunit C OS=Rattus norvegicus
GN=C1qc PE=1 SV=2
Length = 245
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 27/42 (64%)
Query: 35 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
G G+PG PGL G PG++G DG+ G G PG IPGT G K
Sbjct: 31 GCYGIPGMPGLPGTPGKDGHDGLQGPKGEPGIPAIPGTQGPK 72
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Query: 27 ISGRIGLDGRDGL---PGEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGT 75
+ G G DG DGL GEPG+ IPG G G G+ G+P GK+G GT+G+
Sbjct: 41 LPGTPGKDGHDGLQGPKGEPGIPAIPGTQGPKGQKGEPGMPGHRGKNGPMGTSGS 95
>sp|P0C862|C1T9A_HUMAN Complement C1q and tumor necrosis factor-related protein 9A
OS=Homo sapiens GN=C1QTNF9 PE=1 SV=1
Length = 333
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 3 RVQGMLQVLEVHDRRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 62
R+ +L +E+ + S G G+PG PG +G+PGR+G DG G G
Sbjct: 2 RIWWLLLAIEI--------CTGNINSQDTCRQGHPGIPGNPGHNGLPGRDGRDGAKGDKG 53
Query: 63 ---LPGKDGIPGTNGTKTDHYAMGADTKSFSDGV 93
PG+ G PG +GT + GAD K + G+
Sbjct: 54 DAGEPGRPGSPGKDGTSGEKGERGADGKVEAKGI 87
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 29/61 (47%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADT 86
+ GR G DG G G+ G G PG G DG G+ G G DG G K D + G+
Sbjct: 39 LPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPG 98
Query: 87 K 87
K
Sbjct: 99 K 99
>sp|P17139|CO4A1_CAEEL Collagen alpha-1(IV) chain OS=Caenorhabditis elegans GN=emb-9 PE=1
SV=4
Length = 1759
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDH 79
+G G +G DG PG PG G PG G DG PG G+PG+DG+ G G + +H
Sbjct: 915 AGAPGQNGMDGYPGAPGDQGYPGSPGQDGYPGPSGIPGEDGLVGFPGLRGEH 966
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 28/47 (59%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 75
G GL G DGLPG G +GIPG NG DG PG GL G G G NG
Sbjct: 103 GHPGLQGLDGLPGLKGEEGIPGCNGTDGFPGMPGLAGPPGQSGQNGN 149
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 27 ISGRIGLDGRDGLPGEPGL---DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
I+G GL G GLPG PG DGIPG+ G++G G+DG PG G PG G +
Sbjct: 1105 ITGMPGLKGESGLPGLPGRQGNDGIPGQPGLEGECGEDGFPGSPGQPGYPGQQ 1157
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 20 GRAISTVISGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
GR + I G+ GL+G DG PG PG G PG+ G +G G G+PG++G+PG G
Sbjct: 1122 GRQGNDGIPGQPGLEGECGEDGFPGSPGQPGYPGQQGREGEKGYPGIPGENGLPGLRG 1179
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 34/67 (50%), Gaps = 12/67 (17%)
Query: 20 GRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK------------DGLPGKD 67
G A + + G G GRDGLPG PG G G NG DG PG+ DG G+D
Sbjct: 838 GDAGAAGLPGPDGYPGRDGLPGTPGYPGEAGMNGQDGAPGQPGSRGESGLVGIDGKKGRD 897
Query: 68 GIPGTNG 74
G PGT G
Sbjct: 898 GTPGTRG 904
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 9/50 (18%)
Query: 29 GRIGLDGRDGLPGEPGL------DGIPGRNGMDGIPGKDGLPGKDGIPGT 72
GR G +G G PG+PG+ DG PGR+G+DG+PG+ PG++G+PG
Sbjct: 1391 GRSGDNGYPGAPGQPGIKGPRGDDGFPGRDGLDGLPGR---PGREGLPGP 1437
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
+ G G DG G PG PG +G PG G+ G+PG+ G G +G PG G
Sbjct: 1356 LEGDCGEDGYPGAPGAPGSNGYPGERGLPGVPGQQGRSGDNGYPGAPG 1403
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADTK 87
+G G G GLPG+ GL G PG+ G G PG DG PG G+ G G D GA +
Sbjct: 1452 NGYPGEKGYPGLPGDNGLSGPPGKAGYPGAPGTDGYPGPPGLSGMPGHGGDQGFQGAAGR 1511
Query: 88 SFSDGV 93
+ + G+
Sbjct: 1512 TGNPGL 1517
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 16 RRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK---DGLPGKDGIPGT 72
R + ++ + G G +G PGE G G+PG NG+ G PGK G PG DG PG
Sbjct: 1431 REGLPGPMAMAVRNPPGQPGENGYPGEKGYPGLPGDNGLSGPPGKAGYPGAPGTDGYPGP 1490
Query: 73 NG 74
G
Sbjct: 1491 PG 1492
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 9/60 (15%)
Query: 24 STVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD---------GIPGTNG 74
+ + G G G DG+PG+PGL+G G +G G PG+ G PG+ GIPG NG
Sbjct: 1114 ESGLPGLPGRQGNDGIPGQPGLEGECGEDGFPGSPGQPGYPGQQGREGEKGYPGIPGENG 1173
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG---KDGLPGKDGIPGTNGTKTDHYAMGAD 85
G G +G G G PG DG PGR+G+ G PG + G+ G+DG PG G++ + +G D
Sbjct: 832 GYPGPNGDAGAAGLPGPDGYPGRDGLPGTPGYPGEAGMNGQDGAPGQPGSRGESGLVGID 891
Query: 86 TKSFSDGV 93
K DG
Sbjct: 892 GKKGRDGT 899
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 12/58 (20%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGI------------PGKDGLPGKDGIPGTNG 74
G G G+DG PG G G PG+NGMDG PG+DG PG GIPG +G
Sbjct: 898 GTPGTRGQDGGPGYSGEAGAPGQNGMDGYPGAPGDQGYPGSPGQDGYPGPSGIPGEDG 955
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
+ G+ G DG G PG PG++G+P G++G G+DG PG G PG+NG
Sbjct: 1332 LDGKRGHDGLPGAPGVPGVEGVP---GLEGDCGEDGYPGAPGAPGSNG 1376
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%)
Query: 38 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADTKSFSDGV 93
G PGE GL G+ G+ G DG+PG G+PG +G+PG G + GA S+G
Sbjct: 1322 GYPGERGLPGLDGKRGHDGLPGAPGVPGVEGVPGLEGDCGEDGYPGAPGAPGSNGY 1377
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 32 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 73
G +G DG PG PGL G PG++G +G PG+ GL G G G N
Sbjct: 124 GCNGTDGFPGMPGLAGPPGQSGQNGNPGRPGLSGPPGEGGVN 165
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 35/69 (50%), Gaps = 20/69 (28%)
Query: 27 ISGRIGLDG------RDGL-----------PGEPGLDGIPGRNGMDGIPGKDGL---PGK 66
GR GLDG R+GL PG+PG +G PG G G+PG +GL PGK
Sbjct: 1416 FPGRDGLDGLPGRPGREGLPGPMAMAVRNPPGQPGENGYPGEKGYPGLPGDNGLSGPPGK 1475
Query: 67 DGIPGTNGT 75
G PG GT
Sbjct: 1476 AGYPGAPGT 1484
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 37/83 (44%), Gaps = 26/83 (31%)
Query: 29 GRIGLDGRDGLPGEPGLD-----------------------GIPGRN---GMDGIPGKDG 62
G +G +G DG GEPGLD G PG N G G+PG DG
Sbjct: 791 GEVGFNGIDGDCGEPGLDGYPGAPGAPGAPGETGFGFPGQVGYPGPNGDAGAAGLPGPDG 850
Query: 63 LPGKDGIPGTNGTKTDHYAMGAD 85
PG+DG+PGT G + G D
Sbjct: 851 YPGRDGLPGTPGYPGEAGMNGQD 873
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 35/76 (46%), Gaps = 14/76 (18%)
Query: 4 VQGMLQVLEVHDRRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGI-----P 58
+ GM E DR + G G G GLPGEPG G PG +G+ G P
Sbjct: 413 IDGMPGYTEKGDRGE---------DGYPGFAGEPGLPGEPGDCGYPGEDGLPGYDIQGPP 463
Query: 59 GKDGLPGKDGIPGTNG 74
G DG G+DG PG G
Sbjct: 464 GLDGQSGRDGFPGIPG 479
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 23 ISTVISGRIGLDGRDGLPGEPGLDGIPGRN---GMDGIPGKDGLPGKDGIPGTNG 74
I ++G+ G+DG GLPG+ G DG+PG G DG PG G G DG+PG G
Sbjct: 725 IVNQVAGQPGVDGMPGLPGDRGADGLPGLPGPVGPDGYPGTPGERGMDGLPGFPG 779
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 29/57 (50%)
Query: 18 DIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
D G + +G G G DG PG PGL G+PG G G G G G G+PGT G
Sbjct: 1466 DNGLSGPPGKAGYPGAPGTDGYPGPPGLSGMPGHGGDQGFQGAAGRTGNPGLPGTPG 1522
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 31/58 (53%)
Query: 18 DIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 75
D G S G GL G G PG GLDG+PG G +GIPG +G G G+PG G
Sbjct: 83 DFGDMGSKGARGDRGLPGSPGHPGLQGLDGLPGLKGEEGIPGCNGTDGFPGMPGLAGP 140
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 27/47 (57%)
Query: 32 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
GLDG G PGE G DG+PG G DG PG G G+ G PG G +
Sbjct: 985 GLDGVPGYPGEHGTDGLPGLPGADGQPGFVGEAGEPGTPGYRGQPGE 1031
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 40/86 (46%), Gaps = 19/86 (22%)
Query: 27 ISGRIGLDG---RDGLPGEPGLDGIPGRNG----------------MDGIPGKDGLPGKD 67
I G GLDG RDG PG PG G PG +G M G+PG+ G+PG+
Sbjct: 459 IQGPPGLDGQSGRDGFPGIPGDIGDPGYSGEKGFPGTGVNKVGPPGMTGLPGEPGMPGRI 518
Query: 68 GIPGTNGTKTDHYAMGADTKSFSDGV 93
G+ G G ++ G D DGV
Sbjct: 519 GVDGYPGPPGNNGERGEDCGYCPDGV 544
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNG 74
G G++G+DG PG+PG G G G+DG G+DG P G+DG PG +G
Sbjct: 863 YPGEAGMNGQDGAPGQPGSRGESGLVGIDGKKGRDGTPGTRGQDGGPGYSG 913
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 28/49 (57%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 75
G+ G +G G PG PG +G+PG G DG PG G G DG PG G+
Sbjct: 1153 YPGQQGREGEKGYPGIPGENGLPGLRGQDGQPGLKGENGLDGQPGYPGS 1201
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
GR G G G+PGE GL G+ G++G G+ G++GL G+ G PG+ G
Sbjct: 1158 GREGEKGYPGIPGENGLPGLRGQDGQPGLKGENGLDGQPGYPGSAG 1203
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
+ G GL G +G+PG G DG PG G+ G PG+ G G G PG +G +
Sbjct: 110 LDGLPGLKGEEGIPGCNGTDGFPGMPGLAGPPGQSGQNGNPGRPGLSGPPGE 161
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 11/63 (17%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMD-----------GIPGKDGLPGKDGIPGTNGT 75
++G G G++G PG PGL G PG G++ G G GLPG G PG G
Sbjct: 137 LAGPPGQSGQNGNPGRPGLSGPPGEGGVNSQGRKGVKGESGRSGVPGLPGNSGYPGLKGA 196
Query: 76 KTD 78
K D
Sbjct: 197 KGD 199
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 35 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD--GIPGTNGTK 76
G DG PG G G+PG G G PG+DGLPG D G PG +G
Sbjct: 426 GEDGYPGFAGEPGLPGEPGDCGYPGEDGLPGYDIQGPPGLDGQS 469
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 39 LPGEPGLD--GIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDH 79
PG PG D G PG+ G DG PG DGLPG G+ G G+ +
Sbjct: 1264 YPGAPGQDIYGPPGQAGQDGYPGLDGLPGAPGLNGEPGSPGQY 1306
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 30/57 (52%)
Query: 20 GRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
G A V G G G G GEPG G PG++G +G PG G+ G +G G G+K
Sbjct: 34 GCAPPCVCPGTKGERGNPGFGGEPGHPGAPGQDGPEGAPGAPGMFGAEGDFGDMGSK 90
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 25/46 (54%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 72
+ G G G DGLPG PG DG PG G G PG G G+ G PG
Sbjct: 989 VPGYPGEHGTDGLPGLPGADGQPGFVGEAGEPGTPGYRGQPGEPGN 1034
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
G G G +G PGE GL G+PG+ G G +G PG G PG G + D
Sbjct: 1365 YPGAPGAPGSNGYPGERGLPGVPGQQGRS---GDNGYPGAPGQPGIKGPRGD 1413
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
+ G +G DG G PGE G+DG+PG G+ G PG G G+ G G +G
Sbjct: 753 LPGPVGPDGYPGTPGERGMDGLPGFPGLHGEPGMRGQQGEVGFNGIDG 800
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 24/43 (55%)
Query: 32 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
G GR G+PG PG G PG G G PG GLPG G+ G G
Sbjct: 174 GESGRSGVPGLPGNSGYPGLKGAKGDPGPYGLPGFPGVSGLKG 216
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 35/73 (47%), Gaps = 14/73 (19%)
Query: 27 ISGRIGLDGRDGLPGE--P----GLDGIPGRNGMDGIP--------GKDGLPGKDGIPGT 72
+ G GL G DGLPG P G G PG+ G+DG+P G+DG PG G PG
Sbjct: 380 VQGGKGLPGHDGLPGPVGPRGPVGAPGAPGQPGIDGMPGYTEKGDRGEDGYPGFAGEPGL 439
Query: 73 NGTKTDHYAMGAD 85
G D G D
Sbjct: 440 PGEPGDCGYPGED 452
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 21/68 (30%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNG---------------MDGIPGKDGLPG------K 66
+G+ G G DGLPG PGL+G PG G + G PG+ GLPG
Sbjct: 1279 AGQDGYPGLDGLPGAPGLNGEPGSPGQYGMPGLPGGPGESGLPGYPGERGLPGLDGKRGH 1338
Query: 67 DGIPGTNG 74
DG+PG G
Sbjct: 1339 DGLPGAPG 1346
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 32/71 (45%), Gaps = 14/71 (19%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPG--------------RNGMDGIPGKDGLPGKDGIPGTNG 74
G G DG DGLPG PG +G+PG NG G G GLPG +G+ G G
Sbjct: 1415 GFPGRDGLDGLPGRPGREGLPGPMAMAVRNPPGQPGENGYPGEKGYPGLPGDNGLSGPPG 1474
Query: 75 TKTDHYAMGAD 85
A G D
Sbjct: 1475 KAGYPGAPGTD 1485
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 18 DIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKT 77
+ G + G G G G PG PG DG PG + GIPG+DGL G PG G
Sbjct: 914 EAGAPGQNGMDGYPGAPGDQGYPGSPGQDGYPGPS---GIPGEDGL---VGFPGLRGEHG 967
Query: 78 DH 79
D+
Sbjct: 968 DN 969
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 27 ISGRIGLDGRDGLPGEPGLD---GIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
+ G G DG GLPG G D G PG GMDG+PG GL G+ G+ G G
Sbjct: 741 LPGDRGADGLPGLPGPVGPDGYPGTPGERGMDGLPGFPGLHGEPGMRGQQG 791
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK------DGLPGKDGIPGTNGT 75
+G G G+ G PG PG DG PG G+ G+PG G G+ G PG GT
Sbjct: 1467 NGLSGPPGKAGYPGAPGTDGYPGPPGLSGMPGHGGDQGFQGAAGRTGNPGLPGT 1520
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADT 86
+ G G DG+ GL GE GLDG PG G G+ G PG G PG G D+ G D
Sbjct: 1174 LPGLRGQDGQPGLKGENGLDGQPGYPGSA---GQLGTPGDVGYPGAPGENGDNGNQGRDG 1230
Query: 87 K 87
+
Sbjct: 1231 Q 1231
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 15/70 (21%)
Query: 22 AISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK---------------DGLPGK 66
A I G G G+DG PG GL G PG NG G PG+ G PG+
Sbjct: 1267 APGQDIYGPPGQAGQDGYPGLDGLPGAPGLNGEPGSPGQYGMPGLPGGPGESGLPGYPGE 1326
Query: 67 DGIPGTNGTK 76
G+PG +G +
Sbjct: 1327 RGLPGLDGKR 1336
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 39/98 (39%), Gaps = 16/98 (16%)
Query: 12 EVHDRRDIGRAISTVISGRIGLDGRDGLPGEPGLDG----------------IPGRNGMD 55
E + + G + G G G G PG PG +G G G D
Sbjct: 319 EKGSQGEQGLGGTPGYPGTKGGAGEPGYPGRPGFEGDCGPEGPLGEGTGEAGPHGAQGFD 378
Query: 56 GIPGKDGLPGKDGIPGTNGTKTDHYAMGADTKSFSDGV 93
G+ G GLPG DG+PG G + A GA + DG+
Sbjct: 379 GVQGGKGLPGHDGLPGPVGPRGPVGAPGAPGQPGIDGM 416
>sp|P08121|CO3A1_MOUSE Collagen alpha-1(III) chain OS=Mus musculus GN=Col3a1 PE=2 SV=4
Length = 1464
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 34/60 (56%)
Query: 12 EVHDRRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 71
E R + G A S I G G DG+DG PGEPG +G+PG G G G G G +GIPG
Sbjct: 441 EPGARGERGEAGSPGIPGPKGEDGKDGSPGEPGANGLPGAAGERGPSGFRGPAGPNGIPG 500
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 20 GRAISTVISGRIGLDGRDGLPGEPGLDG---IPGRNGMDGIPGKDGLPGKDGIPGTNGT 75
GR + G G+ G G+PG PG+ G GRNG G G GL G++G+PG NG
Sbjct: 236 GRPGERGLPGPPGIKGPAGMPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGDNGA 294
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 29/54 (53%)
Query: 30 RIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMG 83
+ G GR G PGE GL G PG G G+PG G+ G G G NG K + A G
Sbjct: 228 KDGESGRPGRPGERGLPGPPGIKGPAGMPGFPGMKGHRGFDGRNGEKGETGAPG 281
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 25/48 (52%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
G G G++G GEPG G G G GIPG G GKDG PG G
Sbjct: 428 GPSGEPGKNGAKGEPGARGERGEAGSPGIPGPKGEDGKDGSPGEPGAN 475
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 9/68 (13%)
Query: 27 ISGRIGLDGRDGLPGE---PGL---DGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTKT 77
+ G G DGR+G GE PGL +G+PG NG G G G P G+ G+PG G +
Sbjct: 261 MKGHRGFDGRNGEKGETGAPGLKGENGLPGDNGAPGPMGPRGAPGERGRPGLPGAAGARG 320
Query: 78 DHYAMGAD 85
+ A G+D
Sbjct: 321 NDGARGSD 328
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Query: 28 SGRIGLDGRDGLPG------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
SG G +G G PG E G GIPG G DG G G PG +G+PG G +
Sbjct: 430 SGEPGKNGAKGEPGARGERGEAGSPGIPGPKGEDGKDGSPGEPGANGLPGAAGER 484
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADTKS 88
G G G +G+PG G G PG+NG G PG G G+ G PG G K + G+ +
Sbjct: 413 GPPGPAGTNGIPGTRGPSGEPGKNGAKGEPGARGERGEAGSPGIPGPKGEDGKDGSPGEP 472
Query: 89 FSDGV 93
++G+
Sbjct: 473 GANGL 477
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 26/48 (54%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
I G GL G G PG G +GIPG G G PGK+G G+ G G G
Sbjct: 402 IPGAPGLIGARGPPGPAGTNGIPGTRGPSGEPGKNGAKGEPGARGERG 449
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 35 GRDGLPGEPGL---DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADTKSFSD 91
G G+PG PGL G PG G +GIPG G G PG NG K + A G ++ S
Sbjct: 398 GPAGIPGAPGLIGARGPPGPAGTNGIPGTR---GPSGEPGKNGAKGEPGARGERGEAGSP 454
Query: 92 GV 93
G+
Sbjct: 455 GI 456
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 31/65 (47%), Gaps = 9/65 (13%)
Query: 28 SGRIGLDGRDGLPGEPGLDG---------IPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
SGR G G GLPG PG+ G + G G DG G+ G G G+ G NG D
Sbjct: 232 SGRPGRPGERGLPGPPGIKGPAGMPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGD 291
Query: 79 HYAMG 83
+ A G
Sbjct: 292 NGAPG 296
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%)
Query: 18 DIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN 73
+ G + + G GL G +G PG G G PG G G+PG G G DG G++
Sbjct: 273 EKGETGAPGLKGENGLPGDNGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSD 328
>sp|Q9TUC5|SFTPA_MACMU Pulmonary surfactant-associated protein A OS=Macaca mulatta
GN=SFTPA1 PE=2 SV=2
Length = 248
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 30/61 (49%), Gaps = 19/61 (31%)
Query: 35 GRDGLPGEPGLDGIPGRNGMDGI-------------------PGKDGLPGKDGIPGTNGT 75
G G+PG PG G+PGR+G DG+ PG DGLPG GIPG G
Sbjct: 28 GSPGIPGTPGSHGLPGRDGRDGVKGDPGPPGPMGPPGDMPCFPGNDGLPGAPGIPGECGE 87
Query: 76 K 76
K
Sbjct: 88 K 88
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query: 33 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 65
G DGLPG P GIPG G G PG+ G PG
Sbjct: 69 FPGNDGLPGAP---GIPGECGEKGEPGERGPPG 98
>sp|Q96P44|COLA1_HUMAN Collagen alpha-1(XXI) chain OS=Homo sapiens GN=COL21A1 PE=2 SV=1
Length = 957
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 18 DIGRAISTVIS--GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 75
D+G + I G+ GL G G PG PG G PG+ G DG PG G+ G G+PG+ G
Sbjct: 436 DVGSTPAPCICPPGKPGLQGPKGDPGLPGNPGYPGQPGQDGKPGYQGIAGTPGVPGSPGI 495
Query: 76 K 76
+
Sbjct: 496 Q 496
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD---GIPGTNGTKTDH 79
G+ G G G GEPG+ G+PG +G+ G PG G PG+ G+PG G K D
Sbjct: 647 GQPGTPGSKGSKGEPGIQGMPGASGLKGEPGATGSPGEPGYMGLPGIQGKKGDK 700
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 28/51 (54%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDH 79
G G G+DG PG G+ G PG G GI G GLPG G PG +G K D
Sbjct: 467 GYPGQPGQDGKPGYQGIAGTPGVPGSPGIQGARGLPGYKGEPGRDGDKGDR 517
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPG---------RNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
SG G G G PGEPG G+PG G GI G+ G G+ GIPG G +
Sbjct: 670 SGLKGEPGATGSPGEPGYMGLPGIQGKKGDKGNQGEKGIQGQKGENGRQGIPGQQGIQGH 729
Query: 79 HYAMGADTKSFSDGV 93
H A G + GV
Sbjct: 730 HGAKGERGEKGEPGV 744
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 29 GRIGLDGRDGLPGEPGL---DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGA 84
G G G+ G PG PGL +G PG+ G G G G PG G+PG +G K + A G+
Sbjct: 623 GPPGQQGKKGAPGMPGLMGSNGSPGQPGTPGSKGSKGEPGIQGMPGASGLKGEPGATGS 681
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 3/38 (7%)
Query: 39 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
LPG PG DG+PG + G+PG+ G+ G G+PG NG K
Sbjct: 844 LPGLPGRDGVPG---LVGVPGRPGVRGLKGLPGRNGEK 878
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 32 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 69
GL GRDG+PG G+ G PG G+ G+PG++G G G
Sbjct: 846 GLPGRDGVPGLVGVPGRPGVRGLKGLPGRNGEKGSQGF 883
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
G GL G+ G G PG G G GM G+ G +G PG+ G PG+ G+K
Sbjct: 609 FPGNRGLMGQKGEIGPPGQQGKKGAPGMPGLMGSNGSPGQPGTPGSKGSK 658
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 27 ISGRIGLDGRDGLPG---EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
+ G G+ G GLPG EPG DG G G+ G PG G+PG G G G K
Sbjct: 489 VPGSPGIQGARGLPGYKGEPGRDGDKGDRGLPGFPGLHGMPGSKGEMGAKGDK 541
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 9/65 (13%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD---------GIPGTNGTKTDH 79
G+ G G G+ G PG+ G PG G G+PG G PG+D G PG +G
Sbjct: 473 GQDGKPGYQGIAGTPGVPGSPGIQGARGLPGYKGEPGRDGDKGDRGLPGFPGLHGMPGSK 532
Query: 80 YAMGA 84
MGA
Sbjct: 533 GEMGA 537
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
+G G G+DG GEPG+ G PG G+ G G+ G PG+ G G G
Sbjct: 589 AGSPGAPGQDGTRGEPGIPGFPGNRGLMGQKGEIGPPGQQGKKGAPG 635
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
+G G G+DGL G PG G G G PG+DG G+ GIPG G +
Sbjct: 568 AGEPGRHGKDGLMGSPGFK---GEAGSPGAPGQDGTRGEPGIPGFPGNR 613
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 38 GLPGEPGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGTK 76
G PG PG G PGR+G DG+ PG G G G PG +GT+
Sbjct: 560 GFPGLPGPAGEPGRHGKDGLMGSPGFKGEAGSPGAPGQDGTR 601
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD---GIPGTNGTK 76
+ G G G G PG PG DG G G+ G PG GL G+ G PG G K
Sbjct: 579 LMGSPGFKGEAGSPGAPGQDGTRGEPGIPGFPGNRGLMGQKGEIGPPGQQGKK 631
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 25/46 (54%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
G+ GL G G GE G G PG++G G PG G PG G+ G G
Sbjct: 575 GKDGLMGSPGFKGEAGSPGAPGQDGTRGEPGIPGFPGNRGLMGQKG 620
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD---HYAMG 83
+ G G G G GE G+ G G NG GIPG+ G+ G G G G K + A+G
Sbjct: 690 LPGIQGKKGDKGNQGEKGIQGQKGENGRQGIPGQQGIQGHHGAKGERGEKGEPGVRGAIG 749
Query: 84 ADTKSFSDGVL 94
+ +S DG++
Sbjct: 750 SKGESGVDGLM 760
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 31/65 (47%), Gaps = 9/65 (13%)
Query: 20 GRAISTVISGRIGLDGRDGLPGEPGLDGI---------PGRNGMDGIPGKDGLPGKDGIP 70
G A S G+ G G G+PG PG G+ PG+ G G PG GL G +G P
Sbjct: 587 GEAGSPGAPGQDGTRGEPGIPGFPGNRGLMGQKGEIGPPGQQGKKGAPGMPGLMGSNGSP 646
Query: 71 GTNGT 75
G GT
Sbjct: 647 GQPGT 651
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 30/66 (45%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADTK 87
G G G G+PG GL G PG G G PG GLPG G G G + + G +
Sbjct: 655 KGSKGEPGIQGMPGASGLKGEPGATGSPGEPGYMGLPGIQGKKGDKGNQGEKGIQGQKGE 714
Query: 88 SFSDGV 93
+ G+
Sbjct: 715 NGRQGI 720
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 30/57 (52%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMG 83
I+G G+ G G+ G GL G G G DG G GLPG G+ G G+K + A G
Sbjct: 483 IAGTPGVPGSPGIQGARGLPGYKGEPGRDGDKGDRGLPGFPGLHGMPGSKGEMGAKG 539
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 21/37 (56%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 65
GR G G GLPG PGL G+PG G G G G PG
Sbjct: 509 GRDGDKGDRGLPGFPGLHGMPGSKGEMGAKGDKGSPG 545
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 23/48 (47%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
+ G G G+ G PG G G PG GM G G G PG G PG G
Sbjct: 639 LMGSNGSPGQPGTPGSKGSKGEPGIQGMPGASGLKGEPGATGSPGEPG 686
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 25/45 (55%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 71
+ G G GRDG G+ GL G PG +GM G G+ G G G PG
Sbjct: 501 LPGYKGEPGRDGDKGDRGLPGFPGLHGMPGSKGEMGAKGDKGSPG 545
>sp|P30754|CAFF_RIFPA Fibril-forming collagen alpha chain (Fragment) OS=Riftia pachyptila
PE=1 SV=2
Length = 1027
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGI---PGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMG 83
+SG+ G+ G +G PG PG+DG PG +G G+PG G PG G+PGT G+ A G
Sbjct: 203 LSGQPGVAGENGHPGMPGMDGANGEPGASGESGLPGPSGFPGPRGMPGTAGSPGQAGAKG 262
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 32/66 (48%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADTK 87
+G G+ G DG GEPG G G G G PG G+PG G PG G K D G +
Sbjct: 213 NGHPGMPGMDGANGEPGASGESGLPGPSGFPGPRGMPGTAGSPGQAGAKGDGGPTGEQGR 272
Query: 88 SFSDGV 93
+ GV
Sbjct: 273 PGAPGV 278
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGTK 76
G G GR G G PG+ G+PG G DG PGKDG P GKDG G G +
Sbjct: 350 AKGPTGDTGRQGNQGTPGIAGLPGNPGSDGRPGKDGRPGIRGKDGKQGEQGPQ 402
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 25 TVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGA 84
T G IGL G G PG PG G PG +G G GK G+ G G PG G + D G+
Sbjct: 699 TGAQGEIGLPGSPGQPGLPGPSGQPGPSGPAGTAGKQGVKGARGSPGLVGKQGDR---GS 755
Query: 85 DTKSFSDGV 93
D + DG
Sbjct: 756 DGEPGRDGT 764
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 30/62 (48%), Gaps = 12/62 (19%)
Query: 25 TVISGRIGLDGRDGLPGEPGL------------DGIPGRNGMDGIPGKDGLPGKDGIPGT 72
T SG +G+ G G GEPG G PG G+ G PG DG PGKDG PG
Sbjct: 330 TGASGAMGIPGEKGPSGEPGAKGPTGDTGRQGNQGTPGIAGLPGNPGSDGRPGKDGRPGI 389
Query: 73 NG 74
G
Sbjct: 390 RG 391
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 36/89 (40%), Gaps = 21/89 (23%)
Query: 25 TVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD---------------------GL 63
T G G G GLPG PG DG PG++G GI GKD G
Sbjct: 357 TGRQGNQGTPGIAGLPGNPGSDGRPGKDGRPGIRGKDGKQGEQGPQGPQGLAGLQGRAGP 416
Query: 64 PGKDGIPGTNGTKTDHYAMGADTKSFSDG 92
PG G PG NG + A G + DG
Sbjct: 417 PGARGEPGKNGAPGEPGAHGEQGDAGKDG 445
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG------IPGTNGTKTDHY 80
G G G+ G PG PG G PG G G+PG GLPG G IPG G +
Sbjct: 290 APGHAGEAGKRGSPGSPGPAGSPGPQGDRGLPGSRGLPGMTGASGAMGIPGEKGPSGEPG 349
Query: 81 AMG 83
A G
Sbjct: 350 AKG 352
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 44 GLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADTKSFSDGVL 94
G G G +G G PG++G PGKDG+PG G + G ++ S G+
Sbjct: 829 GPQGPTGPSGQAGAPGQEGAPGKDGLPGLAGRPGERGEPGVAGRAGSQGLA 879
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Query: 15 DRRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIP---------------G 59
+R + G T SG+ G G++G PG+ GL G+ GR G G P G
Sbjct: 824 ERGNAGPQGPTGPSGQAGAPGQEGAPGKDGLPGLAGRPGERGEPGVAGRAGSQGLAGLMG 883
Query: 60 KDGLPGKDGIPGTNGTKTD 78
+ GLPG G PG G + +
Sbjct: 884 QRGLPGAAGPPGDRGERGE 902
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 25/47 (53%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 75
G G G GLPG PG G+PG +G G G G GK G+ G G+
Sbjct: 697 GETGAQGEIGLPGSPGQPGLPGPSGQPGPSGPAGTAGKQGVKGARGS 743
>sp|B2RNN3|C1T9B_HUMAN Complement C1q and tumor necrosis factor-related protein 9B
OS=Homo sapiens GN=C1QTNF9B PE=1 SV=1
Length = 333
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 3 RVQGMLQVLEVHDRRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD- 61
R+ +L +E+ + S G G+PG PG +G+PGR+G DG G
Sbjct: 2 RIWWLLLAIEI--------CTGNINSQDTCRQGHPGIPGNPGHNGLPGRDGRDGAKGDKG 53
Query: 62 --GLPGKDGIPGTNGTKTDHYAMGADTKSFSDGV 93
G PG G PG +GT + GAD K + G+
Sbjct: 54 DAGEPGCPGSPGKDGTSGEKGERGADGKVEAKGI 87
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 29/61 (47%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADT 86
+ GR G DG G G+ G G PG G DG G+ G G DG G K D + G+
Sbjct: 39 LPGRDGRDGAKGDKGDAGEPGCPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPG 98
Query: 87 K 87
K
Sbjct: 99 K 99
>sp|A8XV37|CO145_CAEBR Putative cuticle collagen 145 OS=Caenorhabditis briggsae GN=col-145
PE=3 SV=1
Length = 294
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
++G G DG+ G PG+ G DG PG G G G+ G PG+DG PG G
Sbjct: 160 LAGPAGPDGQPGFPGQRGNDGFPGAPGAPGDNGQPGAPGQDGFPGQPG 207
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
+G GL G G G+PG PG+ G DG PG G PG +G PG G
Sbjct: 155 TGPAGLAGPAGPDGQPGF---PGQRGNDGFPGAPGAPGDNGQPGAPG 198
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 23/71 (32%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNG-----------------MDGIPGKDGLP------ 64
+G+ G G+DG PG+PG DG G DG PG+DG P
Sbjct: 191 NGQPGAPGQDGFPGQPGADGQRGSGAPGAPGAPGNAGPAGPAGQDGFPGQDGQPGPAGPA 250
Query: 65 GKDGIPGTNGT 75
G+DG PG G+
Sbjct: 251 GQDGFPGNAGS 261
>sp|P02467|CO1A2_CHICK Collagen alpha-2(I) chain (Fragments) OS=Gallus gallus GN=COL1A2
PE=1 SV=2
Length = 1362
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 29/50 (58%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
+SG G G G G PG +G PG G DG PG DG PG+DG PG G +
Sbjct: 897 VSGPPGARGPSGPVGSPGPNGAPGEAGRDGNPGNDGPPGRDGAPGFKGER 946
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGA 84
SG +G G +G PGE G DG PG DG PG+DG PG G G G A+GA
Sbjct: 907 SGPVGSPGPNGAPGEAGRDGNPGN---DGPPGRDGAPGFKGERGAPGNPGPSGALGA 960
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 27 ISGRIGLDGRDGLPGEPGLDG---IPGRNGMDGIPGKDGLPGKDG 68
I G GLDG G PG PG G PG NG G PG GLPG+ G
Sbjct: 178 IRGHNGLDGLTGQPGAPGTKGEPGAPGENGTPGQPGARGLPGERG 222
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 36/80 (45%)
Query: 15 DRRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
+R G A +T G +G+ G G G G G PG NG G G+DG PG DG PG +G
Sbjct: 879 ERGLPGIAGATGEPGPLGVSGPPGARGPSGPVGSPGPNGAPGEAGRDGNPGNDGPPGRDG 938
Query: 75 TKTDHYAMGADTKSFSDGVL 94
GA G L
Sbjct: 939 APGFKGERGAPGNPGPSGAL 958
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 27/56 (48%)
Query: 19 IGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
G+ + G G G +G PG+PG G+PG G G PG G G DG G G
Sbjct: 188 TGQPGAPGTKGEPGAPGENGTPGQPGARGLPGERGRIGAPGPAGARGSDGSAGPTG 243
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 23/43 (53%)
Query: 41 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMG 83
GEPG G PG G+ G PG GLPG DG G G + A G
Sbjct: 383 GEPGSAGPPGPAGLRGEPGSRGLPGADGRAGVMGPAGNRGASG 425
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNG---MDGIPGKDGLPGKDGIPGTNGTKTD 78
++G G G G G PG G+PG +G G PG+ GL G+ G+PG G + +
Sbjct: 534 VTGNQGAKGETGPAGPPGFQGLPGPSGPAGEAGKPGERGLHGEFGVPGPAGPRGE 588
>sp|Q02105|C1QC_MOUSE Complement C1q subcomponent subunit C OS=Mus musculus GN=C1qc
PE=2 SV=2
Length = 246
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 35 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
G G+PG PG+ G PG++G DG+ G G PG +PGT G K
Sbjct: 32 GCYGIPGMPGMPGAPGKDGHDGLQGPKGEPGIPAVPGTRGPK 73
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
G+ G DG G GEPG+ +PG G G G+ G+PG G G GT
Sbjct: 47 GKDGHDGLQGPKGEPGIPAVPGTRGPKGQKGEPGMPGHRGKNGPRGTS 94
>sp|Q8IWL2|SFTA1_HUMAN Pulmonary surfactant-associated protein A1 OS=Homo sapiens
GN=SFTPA1 PE=1 SV=2
Length = 248
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 30/61 (49%), Gaps = 19/61 (31%)
Query: 35 GRDGLPGEPGLDGIPGRNGMDGI-------------------PGKDGLPGKDGIPGTNGT 75
G G+PG PG G+PGR+G DG+ PG DGLPG GIPG G
Sbjct: 28 GSPGIPGTPGSHGLPGRDGRDGLKGDPGPPGPMGPPGEMPCPPGNDGLPGAPGIPGECGE 87
Query: 76 K 76
K
Sbjct: 88 K 88
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 35 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 65
G DGLPG P GIPG G G PG+ G PG
Sbjct: 71 GNDGLPGAP---GIPGECGEKGEPGERGPPG 98
>sp|Q05722|CO9A1_MOUSE Collagen alpha-1(IX) chain OS=Mus musculus GN=Col9a1 PE=2 SV=2
Length = 921
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 33/60 (55%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADTK 87
+G G+DGRDG+PG PG G G+ G G G GLPG GIPG G + GA K
Sbjct: 537 TGLPGVDGRDGIPGMPGTKGEAGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGK 596
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 25/46 (54%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
G +GL G G+PG PG G+ G G G PGK G G G PG G
Sbjct: 565 GDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLGSSGKPGQQG 610
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
I G G+ G G G+ GL G+ GR+G+ G+PG G GK G PG G +
Sbjct: 521 IQGSRGIPGSPGPKGDTGLPGVDGRDGIPGMPGTKGEAGKPGPPGDVGLQ 570
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
G G G G+ G G+ G PG G G+PG D G+DGIPG GTK +
Sbjct: 511 GETGPKGDRGIQGSRGIPGSPGPKGDTGLPGVD---GRDGIPGMPGTKGE 557
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
+G+ G G GL G PG+ GIPG G+ G G G PGK G G++G
Sbjct: 558 AGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLGSSG 604
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Query: 21 RAISTVI--SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGT 72
R I+ ++ G G G DG PG G+ G G G G PG+ G+ G GIPG+
Sbjct: 471 RGITGIVGDKGEKGARGFDGEPGPQGIPGAAGDQGQRGPPGETGPKGDRGIQGSRGIPGS 530
Query: 73 NGTKTDHYAMGAD 85
G K D G D
Sbjct: 531 PGPKGDTGLPGVD 543
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
G G G G PG+PG G G+ G G PG+ G G G+PG+ G
Sbjct: 583 GVAGEKGNTGAPGKPGQLGSSGKPGQQGPPGEVGPRGPRGLPGSRG 628
>sp|A8TX70|CO6A5_HUMAN Collagen alpha-5(VI) chain OS=Homo sapiens GN=COL6A5 PE=1 SV=1
Length = 2615
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYA---MGAD 85
G+ GL G G PG PG G G G+ G G G PG+ G G+ G K + MGA
Sbjct: 1558 GQRGLRGVSGEPGNPGPTGTLGAEGLQGPQGSQGNPGRKGEKGSQGQKGPQGSPGLMGAK 1617
Query: 86 TKSFSDGVL 94
+ G+L
Sbjct: 1618 GSTGRPGLL 1626
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Query: 32 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN----GTKTDHYAMGADTK 87
G G G G+PG G PG G G G+ G PG G PG N G K G +
Sbjct: 1479 GFPGIKGEKGDPGSQGSPGSRGAPGQYGEKGFPGDPGNPGQNNNIKGQKGSKGEQGRQGR 1538
Query: 88 SFSDGV 93
S GV
Sbjct: 1539 SGQKGV 1544
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 24/48 (50%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
GR G G+ G+ G P G GR G G+ G G PG G GT G +
Sbjct: 1534 GRQGRSGQKGVQGSPSSRGSRGREGQRGLRGVSGEPGNPGPTGTLGAE 1581
Score = 35.8 bits (81), Expect = 0.075, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 22/46 (47%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
G G G G G+ G G PG G G G+ GL GK G PG G
Sbjct: 1591 GNPGRKGEKGSQGQKGPQGSPGLMGAKGSTGRPGLLGKKGEPGLPG 1636
Score = 35.8 bits (81), Expect = 0.082, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 29/63 (46%)
Query: 32 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADTKSFSD 91
G GR+G G G+ G PG G G G +GL G G G G K + + G S
Sbjct: 1552 GSRGREGQRGLRGVSGEPGNPGPTGTLGAEGLQGPQGSQGNPGRKGEKGSQGQKGPQGSP 1611
Query: 92 GVL 94
G++
Sbjct: 1612 GLM 1614
Score = 35.8 bits (81), Expect = 0.086, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 17/35 (48%)
Query: 42 EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
E G G PG G G PG G PG G PG G K
Sbjct: 1474 EEGCHGFPGIKGEKGDPGSQGSPGSRGAPGQYGEK 1508
Score = 35.8 bits (81), Expect = 0.086, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 22/46 (47%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
G G GR G G+ G+ G P G G G+ GL G G PG G
Sbjct: 1528 GSKGEQGRQGRSGQKGVQGSPSSRGSRGREGQRGLRGVSGEPGNPG 1573
Score = 35.4 bits (80), Expect = 0.094, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 24/45 (53%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 71
+ G G GR GL G+ G G+PG G G G+ G G GIPG
Sbjct: 1613 LMGAKGSTGRPGLLGKKGEPGLPGDLGPVGQTGQRGRQGDSGIPG 1657
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 25/55 (45%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMG 83
GR G G G P G G G+ G+ G+ G+ G PG G G G + + G
Sbjct: 1537 GRSGQKGVQGSPSSRGSRGREGQRGLRGVSGEPGNPGPTGTLGAEGLQGPQGSQG 1591
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 22/46 (47%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
G G G+ G G PGL G G G G+ GK G PG G G G
Sbjct: 1597 GEKGSQGQKGPQGSPGLMGAKGSTGRPGLLGKKGEPGLPGDLGPVG 1642
Score = 34.3 bits (77), Expect = 0.23, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 23/48 (47%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
G G G G PG G G GR G+ G G+ GLPG G G G +
Sbjct: 1600 GSQGQKGPQGSPGLMGAKGSTGRPGLLGKKGEPGLPGDLGPVGQTGQR 1647
Score = 33.9 bits (76), Expect = 0.30, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 29/70 (41%), Gaps = 20/70 (28%)
Query: 29 GRIGLDGRDGLP------GEPGL---------DGIPGRNGMDGIP-----GKDGLPGKDG 68
G +G G G P GEPGL G GR G GIP G+ G+ G G
Sbjct: 1612 GLMGAKGSTGRPGLLGKKGEPGLPGDLGPVGQTGQRGRQGDSGIPGYGQMGRKGVKGPRG 1671
Query: 69 IPGTNGTKTD 78
PG G K D
Sbjct: 1672 FPGDAGQKGD 1681
Score = 33.9 bits (76), Expect = 0.32, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 21/48 (43%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
G G G G PG G G G+ G G PG G G G PG G K
Sbjct: 1582 GLQGPQGSQGNPGRKGEKGSQGQKGPQGSPGLMGAKGSTGRPGLLGKK 1629
Score = 33.5 bits (75), Expect = 0.36, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 22/48 (45%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
G G +G+ GL G G G PG G G G G G G PG G K
Sbjct: 1552 GSRGREGQRGLRGVSGEPGNPGPTGTLGAEGLQGPQGSQGNPGRKGEK 1599
Score = 32.7 bits (73), Expect = 0.61, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 38 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
G+PG G G+ G G+ G G G+DG PG G
Sbjct: 1395 GIPGPHGTRGLQAMKGSQGLKGSRGHRGEDGNPGVRG 1431
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 37 DGLPGEPGLDGIPGRNGMDGIPGKDGLPGK---DGIPGTNG 74
+G G PG+ G G G G PG G PG+ G PG G
Sbjct: 1475 EGCHGFPGIKGEKGDPGSQGSPGSRGAPGQYGEKGFPGDPG 1515
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 21/48 (43%)
Query: 24 STVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 71
S + G G G DG PG G G G G+ G PG G G G G
Sbjct: 1411 SQGLKGSRGHRGEDGNPGVRGDTGPQGDKGIAGCPGAWGQKGLKGFSG 1458
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 24/59 (40%)
Query: 20 GRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
GR G+ G G GL G G G PG G G PG G G G G G + D
Sbjct: 1594 GRKGEKGSQGQKGPQGSPGLMGAKGSTGRPGLLGKKGEPGLPGDLGPVGQTGQRGRQGD 1652
>sp|Q17459|CO145_CAEEL Putative cuticle collagen 145 OS=Caenorhabditis elegans GN=col-145
PE=3 SV=1
Length = 294
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
+G G DG+ G PG+ G DG PG G G G+ G PG+DG PG G
Sbjct: 161 AGPAGPDGQPGFPGQRGNDGFPGAPGAPGDNGQPGTPGQDGFPGQPG 207
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
SG G G DG PG PG+ G DG PG G PG +G PGT G
Sbjct: 158 SGPAGPAGPDGQPG------FPGQRGNDGFPGAPGAPGDNGQPGTPG 198
>sp|Q9QZR9|CO4A4_MOUSE Collagen alpha-4(IV) chain OS=Mus musculus GN=Col4a4 PE=2 SV=1
Length = 1682
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 25/40 (62%)
Query: 36 RDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 75
DGLPG PGL G+PG G G PG+ G PG DG PG G
Sbjct: 887 EDGLPGLPGLKGLPGLPGFPGFPGERGKPGPDGEPGRKGE 926
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 28/57 (49%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMG 83
+ G G +G G PG PG G G GIPG+ GLPG G PG G K MG
Sbjct: 797 LKGPKGREGSRGFPGIPGSPGHSCERGAPGIPGQPGLPGTPGDPGAPGWKGQPGDMG 853
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 30/57 (52%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMG 83
+ G GL G GLPG PG G G+ G DG PG+ G G+ G PG G + A G
Sbjct: 890 LPGLPGLKGLPGLPGFPGFPGERGKPGPDGEPGRKGEVGEKGWPGLKGDLGERGAKG 946
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 31 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
+G+ G G+PG PG G PG +G G PG G+ G G PG G
Sbjct: 287 VGIKGEKGIPGFPGPRGEPGSHGPPGFPGFKGIQGAAGEPGLFG 330
>sp|P02463|CO4A1_MOUSE Collagen alpha-1(IV) chain OS=Mus musculus GN=Col4a1 PE=2 SV=4
Length = 1669
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 37/76 (48%), Gaps = 15/76 (19%)
Query: 29 GRIGLDGRDGLPGE------PGLDGIPGRNGMDGIPG---------KDGLPGKDGIPGTN 73
G IG G GLPGE PGLDG+PG G G+PG + G PG DGIPG+
Sbjct: 1103 GNIGHPGSPGLPGEKGDKGLPGLDGVPGVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGSA 1162
Query: 74 GTKTDHYAMGADTKSF 89
G K + G F
Sbjct: 1163 GEKGEQGVPGRGFPGF 1178
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 33/65 (50%)
Query: 15 DRRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
D+ G T SG GL G+ G PG PG G G G+ G PG+ G PG G PG G
Sbjct: 844 DKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGSKGEMGVMGTPGQPGSPGPAGTPGLPG 903
Query: 75 TKTDH 79
K DH
Sbjct: 904 EKGDH 908
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 38/79 (48%)
Query: 15 DRRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
++ + G A + + G G G G G PG G+PG G G+PG DG+PG G G G
Sbjct: 1080 EKGEKGSAGTPGMPGSPGPRGSPGNIGHPGSPGLPGEKGDKGLPGLDGVPGVKGEAGLPG 1139
Query: 75 TKTDHYAMGADTKSFSDGV 93
T G + SDG+
Sbjct: 1140 TPGPTGPAGQKGEPGSDGI 1158
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMD--------GIPGKDGLPGKDGIPGTNGTK 76
+ G G GR G PG PG +G+PG G G+PG G PG GIPGT G K
Sbjct: 700 VDGLPGEIGRPGSPGRPGFNGLPGNPGPQGQKGEPGIGLPGLKGQPGLPGIPGTPGEK 757
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 26/45 (57%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 71
G G G DGLPGE G G PGR G +G+PG G G+ G PG
Sbjct: 691 FPGLPGPKGVDGLPGEIGRPGSPGRPGFNGLPGNPGPQGQKGEPG 735
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 11/71 (15%)
Query: 33 LDGRDGLPGEPGLD-----------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYA 81
+ G G PG PGLD G+PG G G+PG G G G+PG G+K +
Sbjct: 824 IKGEKGFPGFPGLDMPGPKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGSKGEMGV 883
Query: 82 MGADTKSFSDG 92
MG + S G
Sbjct: 884 MGTPGQPGSPG 894
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 38 GLPGEPGLDG---IPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHY 80
G PG+PG G +PGR+G++G+PG G PG G PG G + +
Sbjct: 489 GFPGQPGAKGDRGLPGRDGLEGLPGPQGSPGLIGQPGAKGEPGEIF 534
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 26/46 (56%)
Query: 33 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
L G G PG PG G+PGR G G G GLPG G PG+ G K +
Sbjct: 539 LKGDKGDPGFPGQPGMPGRAGTPGRDGHPGLPGPKGSPGSIGLKGE 584
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%)
Query: 15 DRRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
D+ + G+ T G G G G+PG+ G G PG+ G G PG G PG G+PG G
Sbjct: 952 DQGEKGQIGPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGLSGTPGSPGLPGPKG 1011
Query: 75 T 75
+
Sbjct: 1012 S 1012
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 32/73 (43%), Gaps = 11/73 (15%)
Query: 4 VQGMLQVLEVHDRRDIGRAISTVISGRIGLDGRDGLPGEPGL--DGIPGRNGMDGIPGKD 61
V G QV E D +G G G G PG PG G PG+ G G PGKD
Sbjct: 242 VPGQAQVKEKGD---------FAPTGEKGQKGEPGFPGVPGYGEKGEPGKQGPRGKPGKD 292
Query: 62 GLPGKDGIPGTNG 74
G G+ G PG G
Sbjct: 293 GEKGERGSPGIPG 305
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 25/44 (56%)
Query: 35 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
G GLPG G+DG+PG G G PG+ G G G PG G K +
Sbjct: 690 GFPGLPGPKGVDGLPGEIGRPGSPGRPGFNGLPGNPGPQGQKGE 733
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Query: 29 GRIGLDGRDGLPGEPG---------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
G GL G G PG PG L G PG G+ GIPG G+PG G G G K
Sbjct: 993 GDPGLSGTPGSPGLPGPKGSVGGMGLPGSPGEKGVPGIPGSQGVPGSPGEKGAKGEK 1049
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD------GIPGTNGTK 76
G G+ G+DG G PG G G G+ G PG GLPG G+PG+ G K
Sbjct: 972 GTPGVPGKDGQAGHPGQPGPKGDPGLSGTPGSPGLPGPKGSVGGMGLPGSPGEK 1025
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 32/65 (49%), Gaps = 10/65 (15%)
Query: 29 GRIGLDGRDGLPGEPGL----------DGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
G GL G+ G GEPG G PG G G+PG+ G PG+DG PG G K
Sbjct: 516 GSPGLIGQPGAKGEPGEIFFDMRLKGDKGDPGFPGQPGMPGRAGTPGRDGHPGLPGPKGS 575
Query: 79 HYAMG 83
++G
Sbjct: 576 PGSIG 580
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD--------GIPGTNGTKTDH 79
G +G G G PGE G+ GIPG G+ G PG+ G G+ GIPG G K D
Sbjct: 1011 GSVGGMGLPGSPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPGDKGDQ 1069
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 22/42 (52%)
Query: 15 DRRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDG 56
D+ D G + GR G GRDG PG PG G PG G+ G
Sbjct: 542 DKGDPGFPGQPGMPGRAGTPGRDGHPGLPGPKGSPGSIGLKG 583
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 25/48 (52%)
Query: 31 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
IGL G G PG PG+ G PG G G PG G G G PG G + D
Sbjct: 736 IGLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGEQGLTGPPGLQGIRGD 783
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%)
Query: 15 DRRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
D+ + G + + G G G G+PG G GI G G G+PG G G+ G+PG G
Sbjct: 1267 DKGNQGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGLPGVPGFQGQKGLPGLQG 1326
Query: 75 TKTDH 79
K D
Sbjct: 1327 VKGDQ 1331
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 21/38 (55%)
Query: 32 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 69
G G GLPG PG G G G G PG+ G+PG+ G
Sbjct: 646 GPPGAAGLPGSPGFPGPQGDRGFPGTPGRPGIPGEKGA 683
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 24/43 (55%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 69
+ G G G G PG PG G PGR+G G+PG G PG G+
Sbjct: 539 LKGDKGDPGFPGQPGMPGRAGTPGRDGHPGLPGPKGSPGSIGL 581
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 20 GRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDH 79
G S I G G G G+PG G G PG G G G+ G PG G PG G K +
Sbjct: 1151 GEPGSDGIPGSAGEKGEQGVPGR-GFPGFPGSKGDKGSKGEVGFPGLAGSPGIPGVKGEQ 1209
Query: 80 YAM 82
M
Sbjct: 1210 GFM 1212
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 20/38 (52%)
Query: 39 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
LPG PG G+PG G G G G PG G PG G K
Sbjct: 644 LPGPPGAAGLPGSPGFPGPQGDRGFPGTPGRPGIPGEK 681
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRN---GMDGIPGKDGLPGKDGIPG 71
+ G G+ G GLPG PG G G+ G DGIPG G G+ G+PG
Sbjct: 1125 LDGVPGVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGSAGEKGEQGVPG 1172
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Query: 9 QVLEVHDRRDIGRAISTVISGRIGLDGRDGLPG---EPGLDGIPGRNGMDGIPGK----- 60
Q+ D+ G + + G+ G G G PG +PGL G PG G+ G G
Sbjct: 958 QIGPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGLSGTPGSPGLPGPKGSVGGMG 1017
Query: 61 -DGLPGKDGIPGTNGTK 76
G PG+ G+PG G++
Sbjct: 1018 LPGSPGEKGVPGIPGSQ 1034
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 32/74 (43%)
Query: 20 GRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDH 79
G+A G G G G PG PGL G G G G+PG G G GIPG+ G
Sbjct: 981 GQAGHPGQPGPKGDPGLSGTPGSPGLPGPKGSVGGMGLPGSPGEKGVPGIPGSQGVPGSP 1040
Query: 80 YAMGADTKSFSDGV 93
GA + G+
Sbjct: 1041 GEKGAKGEKGQSGL 1054
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI--PGTNGTK 76
G GL G G PG G G PG G GIPG+ G G+ GI PG G K
Sbjct: 649 GAAGLPGSPGFPGPQGDRGFPGTPGRPGIPGEKGAVGQPGIGFPGLPGPK 698
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGA 84
G G G GLPGE G G+PG +G G PG G G G+PG G+ +H MG+
Sbjct: 891 GSPGPAGTPGLPGEKGDHGLPGSSGPRGDPGFKGDKGDVGLPGMPGS-MEHVDMGS 945
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD---GIPGTNGT 75
G G G+DG GE G GIPG +G G+PG+ G G+ G+PG GT
Sbjct: 284 GPRGKPGKDGEKGERGSPGIPGDSGYPGLPGRQGPQGEKGEAGLPGPPGT 333
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 26/46 (56%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
G GL G+ GLPG PG G G G G+PG+ GL G G+ G G
Sbjct: 737 GLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGEQGLTGPPGLQGIRG 782
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 25/50 (50%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
++G G G G G G G+PG G G PG G PG G+PG G K
Sbjct: 1071 LAGFPGSPGEKGEKGSAGTPGMPGSPGPRGSPGNIGHPGSPGLPGEKGDK 1120
>sp|P02462|CO4A1_HUMAN Collagen alpha-1(IV) chain OS=Homo sapiens GN=COL4A1 PE=1 SV=3
Length = 1669
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 35/65 (53%), Gaps = 15/65 (23%)
Query: 29 GRIGLDGRDGLPGE------PGLDGIPGRNGMDGIPG---------KDGLPGKDGIPGTN 73
G +G G GLPGE PGLDGIPG G G+PG + G PG DGIPG+
Sbjct: 1103 GSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGSA 1162
Query: 74 GTKTD 78
G K +
Sbjct: 1163 GEKGE 1167
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 30/55 (54%)
Query: 25 TVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDH 79
T SG GL G+ G PG PG G G G+ G PG+ G PG G PG G K DH
Sbjct: 854 TGQSGLPGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPGLPGEKGDH 908
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 37/84 (44%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADT 86
+ G GL G G G PG G+PG G G+PG DG+PG G G GT G
Sbjct: 1092 MPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKG 1151
Query: 87 KSFSDGVLPSVQRAIAAGLVIYRF 110
+ SDG+ S GL F
Sbjct: 1152 EPGSDGIPGSAGEKGEPGLPGRGF 1175
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 38 GLPGEPGLDG---IPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHY 80
G PG+PG G +PGR+G+ G+PG G PG G PG G + Y
Sbjct: 489 GFPGQPGAKGDRGLPGRDGVAGVPGPQGTPGLIGQPGAKGEPGEFY 534
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 11/73 (15%)
Query: 33 LDGRDGLPGEPGLD-----------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYA 81
+ G G PG PGLD G+PG G G+PG G G GIPG G+K +
Sbjct: 824 IKGEKGFPGFPGLDMPGPKGDKGAQGLPGITGQSGLPGLPGQQGAPGIPGFPGSKGEMGV 883
Query: 82 MGADTKSFSDGVL 94
MG + S G +
Sbjct: 884 MGTPGQPGSPGPV 896
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 19 IGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG------IPGT 72
IG S G G+ G+DG G+PG G G G+ G PG GLPG G +PGT
Sbjct: 962 IGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGT 1021
Query: 73 NGTK 76
G K
Sbjct: 1022 PGEK 1025
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 22/37 (59%)
Query: 32 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 68
G G +GLPG PG G G G G PG+ GLPG+ G
Sbjct: 646 GPPGAEGLPGSPGFPGPQGDRGFPGTPGRPGLPGEKG 682
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 26/46 (56%)
Query: 31 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
+GL G GLPG PG+ G PG G G+PG G G G PG G +
Sbjct: 736 VGLPGLKGLPGLPGIPGTPGEKGSIGVPGVPGEHGAIGPPGLQGIR 781
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 27/50 (54%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
I+G G G G G G+ G+PG G+ G PG G PG G+PG G K
Sbjct: 1071 IAGFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDK 1120
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 75
G+IG G G G+PG G+PG++G G PG+ G G GI GT G
Sbjct: 957 GQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGA 1003
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 20 GRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDH 79
G S I G G G GLPG G G PG G G G+ G PG G PG G+K +
Sbjct: 1151 GEPGSDGIPGSAGEKGEPGLPGR-GFPGFPGAKGDKGSKGEVGFPGLAGSPGIPGSKGEQ 1209
Query: 80 YAM 82
M
Sbjct: 1210 GFM 1212
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 25/46 (54%)
Query: 33 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
+DG G G PG G PG G G PG G+PG G PG G+K D
Sbjct: 1261 IDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGD 1306
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 21/38 (55%)
Query: 39 LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
LPG PG +G+PG G G G G PG G PG G K
Sbjct: 644 LPGPPGAEGLPGSPGFPGPQGDRGFPGTPGRPGLPGEK 681
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 23/42 (54%)
Query: 15 DRRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDG 56
D+ D G ++GR G GRDG PG PG G PG G+ G
Sbjct: 542 DKGDPGFPGQPGMTGRAGSPGRDGHPGLPGPKGSPGSVGLKG 583
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 33/69 (47%), Gaps = 16/69 (23%)
Query: 27 ISGRIGLDGRDGLP------------GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
+ G G+ G GLP GEPG DGIPG G G P GLPG+ G PG G
Sbjct: 1125 LDGIPGVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGSAGEKGEP---GLPGR-GFPGFPG 1180
Query: 75 TKTDHYAMG 83
K D + G
Sbjct: 1181 AKGDKGSKG 1189
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADTKS 88
G G+ G G PG PG G G G+ G PG+ G+PG G G+ G D A G ++
Sbjct: 993 GDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGSPGLPGDKGAKGEKGQA 1052
Query: 89 FSDGV 93
G+
Sbjct: 1053 GPPGI 1057
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 41 GEPGLDGIPGRNGMDGIPGKDG---LPGKDGIPGTNGTKTD 78
G+PG G PG G G PG+DG LPG G PG+ G K +
Sbjct: 544 GDPGFPGQPGMTGRAGSPGRDGHPGLPGPKGSPGSVGLKGE 584
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 10 VLEVHDRRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK------DGL 63
+ E R D G G+ G G+ G G+PG+ G PG G+ G G G
Sbjct: 962 IGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGT 1021
Query: 64 PGKDGIPGTNGTK 76
PG+ G+PG G +
Sbjct: 1022 PGEKGVPGIPGPQ 1034
>sp|B4YNE6|V6_SPTNK Collagen-like protein V6 OS=Sputnik virophage GN=ORF6 PE=3 SV=1
Length = 310
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 29/48 (60%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
G G G DGL G+ G DG+ G+ G DGI G G PG DG+ G GT+
Sbjct: 123 GLKGDSGTDGLKGQTGNDGLKGQAGNDGIKGDKGEPGNDGLKGQTGTQ 170
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 30/57 (52%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGAD 85
G G G DGL G+ G DG+ G +G DG+ G+ G G G G +G K D G D
Sbjct: 105 GLKGQAGTDGLKGQAGTDGLKGDSGTDGLKGQTGNDGLKGQAGNDGIKGDKGEPGND 161
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGT 72
+ G+ G DG G GEPG DG+ G+ G GI G PG G PGT
Sbjct: 142 LKGQAGNDGIKGDKGEPGNDGLKGQTGTQGIKGD---PGAKGDPGT 184
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%)
Query: 15 DRRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
D+ D G + + + G+ G DG G G GL G G +G+ G G DGL G+ G G G
Sbjct: 94 DKGDKGDSGTDGLKGQAGTDGLKGQAGTDGLKGDSGTDGLKGQTGNDGLKGQAGNDGIKG 153
Query: 75 TK 76
K
Sbjct: 154 DK 155
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
G G G DGL G+ G DGI G G PG DGL G+ G G G
Sbjct: 132 GLKGQTGNDGLKGQAGNDGIKGDKGE---PGNDGLKGQTGTQGIKG 174
>sp|P39060|COIA1_HUMAN Collagen alpha-1(XVIII) chain OS=Homo sapiens GN=COL18A1 PE=1 SV=5
Length = 1754
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 28/46 (60%)
Query: 38 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMG 83
G PG PGL G G G DG+PG GLPG++GI G G K D + G
Sbjct: 1057 GDPGVPGLPGAKGEVGADGVPGFPGLPGREGIAGPQGPKGDRGSRG 1102
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 17/27 (62%)
Query: 36 RDGLPGEPGLDGIPGRNGMDGIPGKDG 62
RDG PG+PG DG PG G G PG G
Sbjct: 818 RDGEPGDPGEDGKPGDTGPQGFPGTPG 844
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
G G+ G G GE G DG+P G G+PG++G+ G G G G++
Sbjct: 1057 GDPGVPGLPGAKGEVGADGVP---GFPGLPGREGIAGPQGPKGDRGSR 1101
>sp|P08122|CO4A2_MOUSE Collagen alpha-2(IV) chain OS=Mus musculus GN=Col4a2 PE=2 SV=4
Length = 1707
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 28/47 (59%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
+G G G G+PG PGL G PG G G PG+ G PG+ G PGT G
Sbjct: 797 TGAPGFRGSQGMPGMPGLKGQPGFPGPSGQPGQSGPPGQHGFPGTPG 843
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Query: 26 VISGRIGLDGRDGLPGEPGLDGIPGRN------------GMDGIPGKDGLPGKDGIPGTN 73
V+ + G G GLPG+PGL G+PG GM G+ G+ G PG G PG +
Sbjct: 771 VLGAQPGTRGDAGLPGQPGLKGLPGETGAPGFRGSQGMPGMPGLKGQPGFPGPSGQPGQS 830
Query: 74 GTKTDH 79
G H
Sbjct: 831 GPPGQH 836
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 29/46 (63%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
GRIG+ G G G PG+ G+PG G+ GI G GLPG G PG+ G
Sbjct: 1162 GRIGIPGDKGDFGWPGVPGLPGFPGIRGISGLHGLPGTKGFPGSPG 1207
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 30/60 (50%)
Query: 15 DRRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
DR D G + G G G G+PG PG G G GMDG G GL G+ G PGT G
Sbjct: 883 DRGDAGMSGERGHPGSPGFKGMAGMPGIPGQKGDRGSPGMDGFQGMLGLKGRQGFPGTKG 942
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 28/59 (47%)
Query: 16 RRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
R D G + G G G G G G+ G+PG G G PG G PG+ G PG +G
Sbjct: 779 RGDAGLPGQPGLKGLPGETGAPGFRGSQGMPGMPGLKGQPGFPGPSGQPGQSGPPGQHG 837
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 27 ISGRIGLDGRDGLPGEPGLD-------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDH 79
+ G G+ G GLPG PG G+PG G+ G PG G PG G PG G++ +
Sbjct: 1008 MPGVPGVSGFPGLPGRPGFIKGVKGDIGVPGTPGLPGFPGVSGPPGITGFPGFTGSRGEK 1067
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 30/67 (44%), Gaps = 12/67 (17%)
Query: 23 ISTVISGRIGLDGRDGLPG------------EPGLDGIPGRNGMDGIPGKDGLPGKDGIP 70
VI G GL G G PG +PGL GIPG G G PG G PG GI
Sbjct: 483 CGQVIGGLPGLPGPKGFPGVNGELGKKGDQGDPGLHGIPGFPGFKGAPGVAGAPGPKGIK 542
Query: 71 GTNGTKT 77
G + T T
Sbjct: 543 GDSRTIT 549
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%)
Query: 25 TVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
T + G G GR G+PG+ G G PG G+ G PG G+ G G+PGT G
Sbjct: 1152 TGLQGPQGEPGRIGIPGDKGDFGWPGVPGLPGFPGIRGISGLHGLPGTKG 1201
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 27/47 (57%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
+G GL G G GEPG GIPG G G PG GLPG GI G +G
Sbjct: 1146 TGFPGLTGLQGPQGEPGRIGIPGDKGDFGWPGVPGLPGFPGIRGISG 1192
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
+ G IG+ G GLPG PG+ G P G+ G PG G G+ G PG G
Sbjct: 1030 VKGDIGVPGTPGLPGFPGVSGPP---GITGFPGFTGSRGEKGTPGVAG 1074
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 24 STVISGRIGLDGRDGLPG---EPGLDGIPGRNGMDGIPGKDG 62
S + G GL G+ G PG +PG G PG++G G PG++G
Sbjct: 805 SQGMPGMPGLKGQPGFPGPSGQPGQSGPPGQHGFPGTPGREG 846
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 26/56 (46%)
Query: 33 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADTKS 88
L G G G G G PG+ G G PG G PG G+PG G K + MG S
Sbjct: 1301 LPGIKGDEGSSGAAGFPGQKGWVGDPGPQGQPGVLGLPGEKGPKGEQGFMGNTGPS 1356
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 68
G G+ G GL G+PG G G+ G G PG+ G PG G
Sbjct: 802 FRGSQGMPGMPGLKGQPGFPGPSGQPGQSGPPGQHGFPGTPG 843
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 38 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
G+PG PG G G G G PG++G PG G G G+K
Sbjct: 700 GMPGFPGASGEQGLKGFPGDPGREGFPGPPGFMGPRGSK 738
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%)
Query: 32 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADTKSFSD 91
G G+ G G G +G PG G G+ G+ G G+ G+PG G K D A G +D
Sbjct: 58 GARGQPGAVGPQGYNGPPGLQGFPGLQGRKGDKGERGVPGPTGPKGDVGARGVSGFPGAD 117
Query: 92 GV 93
G+
Sbjct: 118 GI 119
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
G +GL GR G PG G G G+PG GLPG+ G+ G G +
Sbjct: 925 FQGMLGLKGRQGFPG------TKGEAGFFGVPGLKGLPGEPGVKGNRGDR 968
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 17/53 (32%)
Query: 41 GEPGLDGIPGRNGMDGIPGKDGL-----------------PGKDGIPGTNGTK 76
G+PG+ G+ G G DG+PG+DGL PG G+PG GTK
Sbjct: 555 GQPGIPGVHGMKGDDGVPGRDGLDGFPGLPGPPGDGIKGPPGDAGLPGVPGTK 607
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 27/58 (46%), Gaps = 10/58 (17%)
Query: 27 ISGRIGLDGRDGL----------PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
+SG GL GR G PG PGL G PG +G GI G G G G GT G
Sbjct: 1014 VSGFPGLPGRPGFIKGVKGDIGVPGTPGLPGFPGVSGPPGITGFPGFTGSRGEKGTPG 1071
>sp|P29400|CO4A5_HUMAN Collagen alpha-5(IV) chain OS=Homo sapiens GN=COL4A5 PE=1 SV=2
Length = 1685
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 40 PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
PG+PGL G PGR+G G+PG GLPG+ G+PG G+K +
Sbjct: 662 PGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGE 700
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 30/57 (52%), Gaps = 9/57 (15%)
Query: 27 ISGRIGLDGRDGLPG---------EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
I G G G+ GLPG PGL G PGR G++G+ G GLPG G PG G
Sbjct: 1280 IKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKG 1336
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 25/44 (56%)
Query: 31 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
IGL G G GEPGL G PG G+ G G GLPG G PG G
Sbjct: 1073 IGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKG 1116
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
+ G G G G PG PGL+G+ G G+ G+PG G+ G G+PG+ G +
Sbjct: 1298 LKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPE 1347
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 33 LDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
+ G G PG+PGL G+PG G G PG G PG+ PG NG K D
Sbjct: 1280 IKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGR---PGLNGMKGD 1322
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 26 VISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 71
G G G G PG PGL G+PG G DG+P GLPG G PG
Sbjct: 552 TFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLP---GLPGPKGEPG 594
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 16/80 (20%)
Query: 15 DRRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPG----------------RNGMDGIP 58
+ + G+A +T G G+ G G PG PG G PG G G+P
Sbjct: 513 QKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLP 572
Query: 59 GKDGLPGKDGIPGTNGTKTD 78
G G PG+DG+PG G K +
Sbjct: 573 GLPGTPGQDGLPGLPGPKGE 592
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 18/26 (69%)
Query: 54 MDGIPGKDGLPGKDGIPGTNGTKTDH 79
+ G+PG DG PG GIPG NGTK +
Sbjct: 106 LPGMPGHDGAPGPQGIPGCNGTKGER 131
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 68
G+ G G+DG G+PG+ G+PG G G PG+DG G+ G
Sbjct: 295 GKRGKPGKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKG 334
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 18/25 (72%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNG 53
G +GL G GLPG+PGL GIPG G
Sbjct: 675 GDVGLPGDPGLPGQPGLPGIPGSKG 699
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 7/51 (13%)
Query: 16 RRDIGRAISTV----ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 62
+ D G+ I+ + G G DG GLPG+PGL PG+ G+ GIPG G
Sbjct: 652 KGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGL---PGQPGLPGIPGSKG 699
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 35 GRDGLPGEPGLDG---IPGRNGMDGIPGKDGLPGKDG 68
G+ GLPG PG DG +PG G+ G PG G+PG G
Sbjct: 663 GKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKG 699
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 15 DRRDIGRAISTV-ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDG 68
D+ D G IS++ + G G G GLPG PG GI G G G+PG G PG G
Sbjct: 1064 DKGDPG--ISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKG 1116
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 20/32 (62%)
Query: 43 PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
PG G PG++G +G PG GLPG G PG G
Sbjct: 294 PGKRGKPGKDGENGQPGIPGLPGDPGYPGEPG 325
>sp|P08572|CO4A2_HUMAN Collagen alpha-2(IV) chain OS=Homo sapiens GN=COL4A2 PE=1 SV=4
Length = 1712
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 31/60 (51%)
Query: 15 DRRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
DR D G G G G DG+PG PGL G G GMDG G GL G+ G PG+ G
Sbjct: 888 DRGDAGFTGEQGHPGSPGFKGIDGMPGTPGLKGDRGSPGMDGFQGMPGLKGRPGFPGSKG 947
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 15 DRRDIGRAISTVISGRIGLDGRDGLPG---EPGLDGIPGRNGMDGIPGKDG------LPG 65
DR G S + G GL G+ GLPG +PGL G PG +G G PG++G +PG
Sbjct: 801 DRGPPGFRGSQGMPGMPGLKGQPGLPGPSGQPGLYGPPGLHGFPGAPGQEGPLGLPGIPG 860
Query: 66 KDGIPGTNGTKTDHYAMG 83
++G+PG G D A G
Sbjct: 861 REGLPGDRGDPGDTGAPG 878
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 29/47 (61%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 75
GRIGL G G G PG G+PG G+ GI G GLPG G PG+ G+
Sbjct: 1167 GRIGLPGGKGDDGWPGAPGLPGFPGLRGIRGLHGLPGTKGFPGSPGS 1213
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
+ G G G +G PG G G PG++G+ G PG G+PG G PG G K D
Sbjct: 498 LPGPKGFAGINGEPGRKGDRGDPGQHGLPGFPGLKGVPGNIGAPGPKGAKGD 549
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 12/71 (16%)
Query: 26 VISGRIGLDGRDGLPGEPGLDGIP---------GRNGMDGIP---GKDGLPGKDGIPGTN 73
V+ + G G G+PG+PGL G+P G GM G+P G+ GLPG G PG
Sbjct: 776 VLGAQPGPRGDAGVPGQPGLKGLPGDRGPPGFRGSQGMPGMPGLKGQPGLPGPSGQPGLY 835
Query: 74 GTKTDHYAMGA 84
G H GA
Sbjct: 836 GPPGLHGFPGA 846
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 36/75 (48%), Gaps = 18/75 (24%)
Query: 29 GRIGLDGRDGLPGE---PGLDGIPGRNGMDGI---------------PGKDGLPGKDGIP 70
G G+ GR+GLPG+ PG G PG GM G+ PG G G DG+P
Sbjct: 854 GLPGIPGREGLPGDRGDPGDTGAPGPVGMKGLSGDRGDAGFTGEQGHPGSPGFKGIDGMP 913
Query: 71 GTNGTKTDHYAMGAD 85
GT G K D + G D
Sbjct: 914 GTPGLKGDRGSPGMD 928
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 28/50 (56%)
Query: 25 TVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
T G G GR GLPG G DG PG G+ G PG G+ G G+PGT G
Sbjct: 1157 TGPPGSQGELGRIGLPGGKGDDGWPGAPGLPGFPGLRGIRGLHGLPGTKG 1206
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 28/50 (56%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
+ G GL G G PG+ G G+PG G +G+PG G PG G PG G K
Sbjct: 834 LYGPPGLHGFPGAPGQEGPLGLPGIPGREGLPGDRGDPGDTGAPGPVGMK 883
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 27 ISGRIGLDGRDGLPGEPGLD-------GIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDH 79
+ G GL G GLPG PG G+PG G+ G PG G PG G PG G++ D
Sbjct: 1013 MPGIPGLSGIPGLPGRPGHIKGVKGDIGVPGIPGLPGFPGVAGPPGITGFPGFIGSRGDK 1072
Query: 80 YAMG 83
A G
Sbjct: 1073 GAPG 1076
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 25 TVISGRIGLDGRDGLPG---EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
T + G GL G+ G PG PG G GR G+ G G DG PG G+PG G +
Sbjct: 1139 TGVQGPPGLKGQTGFPGLTGPPGSQGELGRIGLPGGKGDDGWPGAPGLPGFPGLR 1193
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 30/62 (48%)
Query: 15 DRRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
D D G + G G G G GE G G PG G+DG+PG GL G G PG +G
Sbjct: 870 DPGDTGAPGPVGMKGLSGDRGDAGFTGEQGHPGSPGFKGIDGMPGTPGLKGDRGSPGMDG 929
Query: 75 TK 76
+
Sbjct: 930 FQ 931
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 23/48 (47%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
G G G G PG PG GI G G G+ G G PG DG G G K
Sbjct: 890 GDAGFTGEQGHPGSPGFKGIDGMPGTPGLKGDRGSPGMDGFQGMPGLK 937
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Query: 15 DRRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG------KDGLPGKDG 68
+R D G A + G +G+ G+ G G PG G PG G+ G PG G PG G
Sbjct: 1227 ERGDPGEA--NTLPGPVGVPGQKGDQGAPGERGPPGSPGLQGFPGITPPSNISGAPGDKG 1284
Query: 69 IPGTNGTK 76
PG G K
Sbjct: 1285 APGIFGLK 1292
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 28/61 (45%)
Query: 24 STVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMG 83
S + G G G G PG PG G G +G G PG GLPG+ G G G + G
Sbjct: 1303 SAALPGSKGDTGNPGAPGTPGTKGWAGDSGPQGRPGVFGLPGEKGPRGEQGFMGNTGPTG 1362
Query: 84 A 84
A
Sbjct: 1363 A 1363
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 31 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
I L G +G+ G PGL G PG +G G PG+ G G DG G +G +
Sbjct: 289 ISLKGEEGIMGFPGLRGYPGLSGEKGSPGQKGSRGLDGYQGPDGPR 334
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKT 77
+G G GR G G+PG G+PG G+ G+PG G PG G G + T T
Sbjct: 504 FAGINGEPGRKGDRGDPGQHGLPGFPGLKGVPGNIGAPGPKGAKGDSRTIT 554
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 28/59 (47%)
Query: 16 RRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
R D G + G G G G G G+ G+PG G G+PG G PG G PG +G
Sbjct: 784 RGDAGVPGQPGLKGLPGDRGPPGFRGSQGMPGMPGLKGQPGLPGPSGQPGLYGPPGLHG 842
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 18/23 (78%)
Query: 41 GEPGLDGIPGRNGMDGIPGKDGL 63
G+PG+ G+PG G DG PG+DGL
Sbjct: 560 GQPGVPGVPGMKGDDGSPGRDGL 582
>sp|Q28668|CO1A2_RABIT Collagen alpha-2(I) chain (Fragment) OS=Oryctolagus cuniculus
GN=COL1A2 PE=2 SV=1
Length = 526
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 41 GEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
G PG++G PG G DG PG DG PG+DG PG G +
Sbjct: 73 GSPGVNGAPGEAGRDGNPGSDGPPGRDGQPGHKGER 108
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 24 STVISGRIGLDGRDGLPGE---PGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 75
S ++G G GRDG PG PG DG PG G G PG G G G PG G+
Sbjct: 74 SPGVNGAPGEAGRDGNPGSDGPPGRDGQPGHKGERGYPGNAGPVGAAGAPGPQGS 128
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 31 IGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGA 84
+G G +G PGE G DG PG DG PG+DG PG G G G A GA
Sbjct: 72 VGSPGVNGAPGEAGRDGNPGS---DGPPGRDGQPGHKGERGYPGNAGPVGAAGA 122
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 28 SGRIGLDGRDGLPGEPG---LDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
SG G+ G G PG+ G L GI G NG+ G+PG G G G PG G
Sbjct: 159 SGPQGIRGDKGEPGDKGPRGLPGIKGHNGLQGLPGLAGQHGDQGAPGAVG 208
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 28/61 (45%), Gaps = 15/61 (24%)
Query: 29 GRIGLDGRDGLPGEPGLDGI---------------PGRNGMDGIPGKDGLPGKDGIPGTN 73
G GL G G GEPG GI PG NG G G+DG PG DG PG +
Sbjct: 40 GERGLPGVAGALGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGSDGPPGRD 99
Query: 74 G 74
G
Sbjct: 100 G 100
>sp|Q8NFW1|COMA1_HUMAN Collagen alpha-1(XXII) chain OS=Homo sapiens GN=COL22A1 PE=1 SV=2
Length = 1626
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 35 GRDGLPGEPGLDGIPGRNGMDGIPGKD---GLPGKDGIPGTNGTKTDHYAMG 83
G DGLPG+PGL G G G+ G PG+ GLPG G PG G K D G
Sbjct: 774 GEDGLPGKPGLRGEIGEQGLAGRPGEKGEAGLPGAPGFPGVRGEKGDQGEKG 825
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 24/69 (34%)
Query: 34 DGRDGLPGEPGLDGIPGRNG------------------------MDGIPGKDGLPGKDGI 69
+G G PGEPG G PG+ G G+PGK+G+PGK G
Sbjct: 1329 NGSPGSPGEPGPSGTPGQKGSKGENGSPGLPGFLGPRGPPGEPGEKGVPGKEGVPGKPGE 1388
Query: 70 PGTNGTKTD 78
PG G + D
Sbjct: 1389 PGFKGERGD 1397
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
++GR G G GLPG PG G+ G G G G+ GLPG G G G
Sbjct: 793 LAGRPGEKGEAGLPGAPGFPGVRGEKGDQGEKGELGLPGLKGDRGEKG 840
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 23/38 (60%)
Query: 32 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 69
G G GLPG PG G GR+G G PG+ G PGK G+
Sbjct: 1060 GSPGSRGLPGFPGPQGPAGRDGAPGNPGERGPPGKPGL 1097
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 9/50 (18%)
Query: 28 SGRIGLDGRDGLPGEPGL------DGIPG---RNGMDGIPGKDGLPGKDG 68
+G GL G +G G PG G PG +G G+PG++GLPGKDG
Sbjct: 1260 AGEPGLPGPEGARGPPGFKGHTGDSGAPGPRGESGAMGLPGQEGLPGKDG 1309
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
+ G G G G GE GLDG PG+ G G+ G PG G+ G G K D
Sbjct: 588 LQGERGEKGTRGEKGERGLDGFPGKPGDT---GQQGRPGPSGVAGPQGEKGD 636
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 28/57 (49%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMG 83
+ G IG G G PGE G G+PG G G+ G+ G G+ G G G K D G
Sbjct: 784 LRGEIGEQGLAGRPGEKGEAGLPGAPGFPGVRGEKGDQGEKGELGLPGLKGDRGEKG 840
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 28 SGRIGLDGRDGLPGEPGLDG---------IPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
SG +GL G++GLPG+ G G G G +G PG G PG G PG G+K +
Sbjct: 1293 SGAMGLPGQEGLPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEPGPSGTPGQKGSKGE 1352
Query: 79 HYAMG 83
+ + G
Sbjct: 1353 NGSPG 1357
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 15 DRRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGI 69
++ D+G I G G G GLPG PG DG G G G G+ GLPG+ G+
Sbjct: 515 EKGDVG--IGPFGQGEKGEKGSLGLPGPPGRDGSKGMRGEPGELGEPGLPGEVGM 567
>sp|P12105|CO3A1_CHICK Collagen alpha-1(III) chain (Fragments) OS=Gallus gallus GN=COL3A1
PE=2 SV=2
Length = 1262
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
G G +G+ G GEPG +G+PG G G PG GLPG +G+PG G
Sbjct: 458 GPPGEEGKRGANGEPGQNGVPGTPGERGSPGFRGLPGSNGLPGEKG 503
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 29 GRIGLDGRDGLPGEPG---LDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
G G G G PGE G +G PG+NG+ G PG+ G PG G+PG+NG
Sbjct: 449 GENGTPGARGPPGEEGKRGANGEPGQNGVPGTPGERGSPGFRGLPGSNG 497
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 29 GRIGLDGRDGLPGEPG------LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAM 82
G G G+DG PG PG + G+PG G G+PG G+ G G G +G K D A
Sbjct: 221 GPAGPPGKDGEPGRPGRNGDRGIPGLPGHKGHPGMPGMPGMKGARGFDGKDGAKGDSGAP 280
Query: 83 GADTKSFSDGV 93
G ++ G
Sbjct: 281 GPKGEAGQPGA 291
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%)
Query: 38 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADTKSFSDGV 93
G PG G G PG+NG G PG G G++G PG G + GA+ + +GV
Sbjct: 422 GNPGAKGTPGEPGKNGAKGDPGPKGERGENGTPGARGPPGEEGKRGANGEPGQNGV 477
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 29/66 (43%), Gaps = 21/66 (31%)
Query: 32 GLDGRDGLPGEPG---------------------LDGIPGRNGMDGIPGKDGLPGKDGIP 70
GL G +GLPGE G DG PG GM G+PG G PG DG P
Sbjct: 491 GLPGSNGLPGEKGPAGERGSPGPPGPSGPAGDRGQDGGPGLPGMRGLPGIPGSPGSDGKP 550
Query: 71 GTNGTK 76
G G +
Sbjct: 551 GPPGNQ 556
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK---DGLPGKDGIPGTNGTK 76
G+ G G G GE G +G PG G G GK +G PG++G+PGT G +
Sbjct: 434 GKNGAKGDPGPKGERGENGTPGARGPPGEEGKRGANGEPGQNGVPGTPGER 484
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 20 GRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTN 73
GR I G G G G+PG PG+ G G +G DG G G P G+ G PG N
Sbjct: 236 GRNGDRGIPGLPGHKGHPGMPGMPGMKGARGFDGKDGAKGDSGAPGPKGEAGQPGAN 292
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPG---RNGMDGIPGKDGLPGKDGIPGTNG 74
SG G G G PG+ G G PG G +G PG G PG++G G NG
Sbjct: 420 TSGNPGAKGTPGEPGKNGAKGDPGPKGERGENGTPGARGPPGEEGKRGANG 470
>sp|P91285|DPY5_CAEEL Cuticle collagen dpy-5 OS=Caenorhabditis elegans GN=dpy-5 PE=3 SV=1
Length = 284
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 36/77 (46%)
Query: 26 VISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGAD 85
I G G+DGLPG+ G G+PG G G PGKDG PG+ G G GT G
Sbjct: 137 CIKCPAGPPGQDGLPGQEGFQGLPGDAGKRGTPGKDGEPGRVGDIGDQGTPGQDGQPGLA 196
Query: 86 TKSFSDGVLPSVQRAIA 102
DG+ Q +A
Sbjct: 197 GPPGRDGLTGKGQPGVA 213
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 29 GRIGLDGRDGLPG---EPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD---HYAM 82
G+ G+ GR G+PG EPG +G PG G G G G PGKDG G +GT A+
Sbjct: 208 GQPGVAGRPGMPGPRGEPGNNGNPGEEGQTGAQGPTGQPGKDGFNGNDGTPGQAGPQGAV 267
Query: 83 GADTK 87
GAD +
Sbjct: 268 GADAE 272
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRN--GMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGA 84
G G DG+ GL G PG DG+ G+ G+ G P G+PG G PG NG + GA
Sbjct: 184 QGTPGQDGQPGLAGPPGRDGLTGKGQPGVAGRP---GMPGPRGEPGNNGNPGEEGQTGA 239
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 16/59 (27%)
Query: 32 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKD----------------GLPGKDGIPGTNG 74
G G G PGEPG G G+NG G+PG + G PG+DG+PG G
Sbjct: 97 GAPGNPGAPGEPGGTGPDGKNGPTGLPGLNIPIPNDFPKECIKCPAGPPGQDGLPGQEG 155
>sp|Q17460|COL10_CAEEL Cuticle collagen 10 OS=Caenorhabditis elegans GN=col-10 PE=2 SV=1
Length = 294
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPG---KDGLPGKDGIPGTNG 74
G G G DG PG PG G PG +G G PG +DG PG+DG PG G
Sbjct: 159 GPAGPAGPDGQPGAPGNAGNPGSDGQPGAPGDNGQDGAPGQDGQPGAPG 207
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDG 62
+G G DG+ G PG+ G DG PG++G G PG+DG
Sbjct: 176 AGNPGSDGQPGAPGDNGQDGAPGQDGQPGAPGQDG 210
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 26 VISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP------GKDGIPGTNG 74
G G G +G G G DG PG G G PG DG P G+DG PG +G
Sbjct: 147 CPEGPAGPAGPEGPAGPAGPDGQPGAPGNAGNPGSDGQPGAPGDNGQDGAPGQDG 201
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 29/76 (38%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGM-----------------------DGIPGKDGLP- 64
G G +G+DG PG+ G G PG++G DG PG+DG P
Sbjct: 186 GAPGDNGQDGAPGQDGQPGAPGQDGQRGSGAPGGPGAPGNAGPAGPAGQDGAPGQDGQPG 245
Query: 65 -----GKDGIPGTNGT 75
G+DG PG G+
Sbjct: 246 PAGPAGQDGAPGNAGS 261
>sp|O35206|COFA1_MOUSE Collagen alpha-1(XV) chain OS=Mus musculus GN=Col15a1 PE=1 SV=2
Length = 1367
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%)
Query: 26 VISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 75
V G G G DG PGEPG G G+ G+DG G+ G+ G+ G G NG+
Sbjct: 626 VFMGPPGSPGEDGAPGEPGPQGPEGQPGLDGASGQQGMKGEKGARGPNGS 675
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 38 GLPGEPGLDGIPGR---NGMDGIPGKDGLPGKDGIPGTNGTK 76
G PG PG DG PG G +G PG DG G+ G+ G G +
Sbjct: 629 GPPGSPGEDGAPGEPGPQGPEGQPGLDGASGQQGMKGEKGAR 670
>sp|Q17RW2|COOA1_HUMAN Collagen alpha-1(XXIV) chain OS=Homo sapiens GN=COL24A1 PE=2 SV=2
Length = 1714
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 18 DIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
D+G A S +G GL G G PGE GL G ++G+ G+PG GLPG+DG G G
Sbjct: 1030 DVGTAGSVGGTGEPGLRGEPGAPGEEGLQG---KDGLKGVPGGRGLPGEDGEKGEMG 1083
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---PGKDGIPGTNGTKTD 78
G +G G G GEPGL G PG G +G+ GKDGL PG G+PG +G K +
Sbjct: 1029 GDVGTAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGE 1081
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
G+IG G+ GLPG + G PGR G+ G PG G+ G G+PG+ G +
Sbjct: 1306 GKIGPPGKQGLPG---IRGGPGRTGLAGAPGPPGVKGSSGLPGSPGIQ 1350
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
GR GL G G PG G G+PG G+ G G+ GLPG+ GI G G +
Sbjct: 1324 GRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGKRGHR 1371
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
SG+ G+ G GL G G+ G G +G+ G PGK G PGK G+PG G
Sbjct: 1275 SGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRG 1321
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGI------PGRNGMDGIPGKDGLPGKDGIPGTNG 74
+ G G G GLPGEPGL G+ PG GM+G PG +G G G PG G
Sbjct: 976 LQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKG 1029
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 9/59 (15%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGI---------PGKDGLPGKDGIPGTNGTK 76
+ G G+ G GL G PGL G+PG G+ G PG+ GL G +G PG G +
Sbjct: 559 LMGPPGMQGDKGLKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQ 617
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 15 DRRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGL---------PG 65
++ D G+ + G+ G G G G+PGL G+PG G G+PG+ GL PG
Sbjct: 946 EKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPG 1005
Query: 66 KDGIPGTNGTKTD 78
+ G+ G GT+ +
Sbjct: 1006 EMGMEGPPGTEGE 1018
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 32 GLDGRDGLPGEPGLDGIPGRNGMDGI---PGKDGLPGKDGIPGTNGT 75
G G DG+ G PG G PG+ G+ GI PG+ GL G G PG G+
Sbjct: 1294 GYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGS 1340
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 12/69 (17%)
Query: 18 DIGRAISTVISGRIGLDGRDGLPGEPGLD------------GIPGRNGMDGIPGKDGLPG 65
D+G + G G +G GL GEPG G PG G G PG++GL G
Sbjct: 1000 DVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQG 1059
Query: 66 KDGIPGTNG 74
KDG+ G G
Sbjct: 1060 KDGLKGVPG 1068
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 31/61 (50%)
Query: 32 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADTKSFSD 91
GL G+ G PGE G G PG G+ G G GLPG+ G+ G G MG + ++
Sbjct: 957 GLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTE 1016
Query: 92 G 92
G
Sbjct: 1017 G 1017
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 26/48 (54%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
I G GL G G+ G G DGI G G G PGK GLPG G PG G
Sbjct: 1280 IPGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTG 1327
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 35 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGAD 85
GR GL G PG G+ G +G+ G PG G G+ G+PG G + GA
Sbjct: 1324 GRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGKRGHRGAQ 1374
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 18 DIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 75
D G + + G G G GL G PG+ G G+ G PG GLPG+ GIPG G
Sbjct: 538 DPGFSPGQPVPGEKGDQGLSGLMGPPGMQ---GDKGLKGHPGLPGLPGEQGIPGFAGN 592
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGI--P-GRNGMDGIPGKD---GLPGKDGIPGTNGTK 76
+ G GL G DG GE GL GI P GR+G G+PG + G+PG+ G PG G K
Sbjct: 1066 VPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDK 1121
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 27 ISGRIGLDGRDGLPGEPG---LDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
+ G G G+ G PGEPG G+ G G +G GK G PG G PG G +
Sbjct: 1232 VPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQ 1284
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD 67
G +G DG G+PG G G PG +G+ G G+ G PG+D
Sbjct: 1158 GLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGED 1196
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 24/48 (50%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 75
G GL G G G G G PG +G GIPG GL G GI G +G
Sbjct: 1251 QGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGLLGPKGIQGYHGA 1298
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 24/50 (48%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
G G+ G GLPG PG+ G G G+ G PG G G G G G D
Sbjct: 1333 GPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGKRGHRGAQGDQGPCGD 1382
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 23/45 (51%)
Query: 32 GLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
G G GLPG+PG+ G G G G G G PG G PG G +
Sbjct: 1351 GPKGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPGEYGVQ 1395
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 26/50 (52%), Gaps = 9/50 (18%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLP---GKDGIPGTNGT 75
G +GL G DG PG IPG G G PG GLP G+ G PG + T
Sbjct: 1155 GHLGLMGPDGEPG------IPGYRGHQGQPGPSGLPGPKGEKGYPGEDST 1198
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 23/46 (50%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
G G G G G+PGL G PG G+ G+ G G PG G G G
Sbjct: 1369 GHRGAQGDQGPCGDPGLKGQPGEYGVQGLTGFQGFPGPKGPEGDAG 1414
>sp|Q07643|CO9A2_MOUSE Collagen alpha-2(IX) chain OS=Mus musculus GN=Col9a2 PE=2 SV=1
Length = 688
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 31/53 (58%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDH 79
I+G G+DG+DG PG PG+ G G+ G G PG GL G G PGT G D
Sbjct: 298 ITGPPGIDGKDGTPGIPGMKGSAGQVGRPGSPGHQGLAGVPGQPGTKGGPGDK 350
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADT 86
+ G G GR G PG GL G+PG+ G G PG G PG+ G+PG +G G
Sbjct: 316 MKGSAGQVGRPGSPGHQGLAGVPGQPGTKGGPGDKGEPGQQGLPGVSGPPGKEGEPGPRG 375
Query: 87 KSFSDGVL 94
+ G++
Sbjct: 376 EIGPQGIM 383
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPG---RNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMG 83
G G G G+PG+PG G PG G G+PG G PGK+G PG G MG
Sbjct: 327 GSPGHQGLAGVPGQPGTKGGPGDKGEPGQQGLPGVSGPPGKEGEPGPRGEIGPQGIMG 384
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 15 DRRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
++ + G++ + G+ G+ G G PG G G PG G G+PG GL G G+PG G
Sbjct: 451 EKGEKGQSGEPGLKGQQGVRGETGYPGPSGDIGAPGVQGYPGLPGPRGLVGDRGVPGQPG 510
Query: 75 TKTDHYAMGADTKSFSDGVLPSVQRAIA 102
+ A + D VL +Q +A
Sbjct: 511 -RQGVVGRAASDQHIVDVVLKMIQEQLA 537
>sp|P23206|COAA1_BOVIN Collagen alpha-1(X) chain OS=Bos taurus GN=COL10A1 PE=2 SV=1
Length = 674
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 32/58 (55%), Gaps = 12/58 (20%)
Query: 29 GRIGLDGRDGLPGEPGLDG------IPGRNGMDGIPGKDGLPGK------DGIPGTNG 74
G GLDG+ G PGEPGL+G +PG G GI G GLPG G+PG NG
Sbjct: 380 GSSGLDGKPGYPGEPGLNGPKGNPGLPGPKGDPGIAGSPGLPGPVGPAGAKGVPGHNG 437
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 19 IGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGM--DGIPGKDGLPGKDGIPGTNGTK 76
IG+ + I G+ G+ G G PG PG G+PG G G+PG G G G+PG+ G K
Sbjct: 263 IGKPGAPGIPGQPGIPGMKGQPGAPGTAGLPGAPGFGKPGLPGLKGQRGPVGLPGSPGAK 322
Query: 77 TDH 79
+
Sbjct: 323 GEQ 325
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 29/63 (46%), Gaps = 12/63 (19%)
Query: 28 SGRIGLDGRDGLPGEPGLDGI------------PGRNGMDGIPGKDGLPGKDGIPGTNGT 75
SG +G G G+PG PGL G PG G G G DG PG G PG NG
Sbjct: 340 SGNMGPQGPKGIPGNPGLPGPKGEMGPVGPAGNPGAKGERGSSGLDGKPGYPGEPGLNGP 399
Query: 76 KTD 78
K +
Sbjct: 400 KGN 402
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 28/56 (50%)
Query: 19 IGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
+G A + G G G DG PG PG G+ G G G+PG G PG G PG G
Sbjct: 367 VGPAGNPGAKGERGSSGLDGKPGYPGEPGLNGPKGNPGLPGPKGDPGIAGSPGLPG 422
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 25/48 (52%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
+ G G G G G PG G+PG +G G G G+PG G+PG G
Sbjct: 315 LPGSPGAKGEQGPAGHPGEAGLPGPSGNMGPQGPKGIPGNPGLPGPKG 362
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 23/71 (32%)
Query: 27 ISGRIGLDGRDGLPGE-----------------------PGLDGIPGRNGMDGIPGKDGL 63
+ G+ GL G G+PGE PG GIPG+ G+ G+ G+ G
Sbjct: 227 LPGQPGLKGDQGVPGERGAAGPSGPQGPPGEQGPEGIGKPGAPGIPGQPGIPGMKGQPGA 286
Query: 64 PGKDGIPGTNG 74
PG G+PG G
Sbjct: 287 PGTAGLPGAPG 297
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
G G G G+ G PGL G G G G+PG +G G G+PG GT+
Sbjct: 404 GLPGPKGDPGIAGSPGLPGPVGPAGAKGVPGHNGEAGPRGVPGIPGTR 451
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 25/55 (45%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMG 83
G +GL G G GE G G PG G+ G G G G GIPG G MG
Sbjct: 311 GPVGLPGSPGAKGEQGPAGHPGEAGLPGPSGNMGPQGPKGIPGNPGLPGPKGEMG 365
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 14/63 (22%)
Query: 27 ISGRIGLDGRDGLPG-----EPGLDGIPGRNGMDGIPGKDGL---------PGKDGIPGT 72
+ G+ G G GLPG +PGL G+ G+ G G+PG G PG+ G+PG
Sbjct: 280 MKGQPGAPGTAGLPGAPGFGKPGLPGLKGQRGPVGLPGSPGAKGEQGPAGHPGEAGLPGP 339
Query: 73 NGT 75
+G
Sbjct: 340 SGN 342
>sp|P35799|DPY2_CAEEL Cuticle collagen dpy-2 OS=Caenorhabditis elegans GN=dpy-2 PE=1 SV=1
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 35 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
G G+PG PG G PG G+ G PG DG+PGK G PG G
Sbjct: 174 GPRGVPGHPGFPGDPGEYGIGGRPGSDGMPGKPGDPGLAG 213
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 24/37 (64%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPG 65
G G+ G G PG+PG GI GR G DG+PGK G PG
Sbjct: 174 GPRGVPGHPGFPGDPGEYGIGGRPGSDGMPGKPGDPG 210
>sp|O93484|CO1A2_ONCMY Collagen alpha-2(I) chain OS=Oncorhynchus mykiss GN=col1a2 PE=2
SV=2
Length = 1356
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 18 DIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTN---G 74
IG T +G+ G DG +G PG+PG G PG G G PG GLPG G G N G
Sbjct: 122 SIGARGPTGSAGKPGEDGNNGRPGKPGDRGGPGTQGARGFPGTPGLPGMKGHRGYNGLDG 181
Query: 75 TKTDHYAMGADTKSFSDGVLPSVQRAIAAGLVIYR 109
K + GA ++ + G S A + GL R
Sbjct: 182 RKGESGTAGAKGETGAHGANGSPGPAGSRGLNGER 216
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGK---DGLPGKDGIPGTNGTKTDHYAMG 83
+ G G G G G PG G+PG G G GK G+PG G+PG G K + G
Sbjct: 530 VVGNTGEKGEQGPAGAPGFQGLPGPAGPAGEAGKAGNQGMPGDQGLPGPAGVKGERGNSG 589
Query: 84 ADTKSFSDGVL 94
+ S G +
Sbjct: 590 PAGSAGSQGAI 600
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 28 SGRIGLDGR---DGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGA 84
SG +GL G GLPG PG G PGR G G G G G G+PG GT+ + G
Sbjct: 864 SGFVGLPGSRGDKGLPGGPGAVGEPGRLGPAGASGPRGPAGNIGMPGMTGTQGE---AGR 920
Query: 85 DTKSFSDG 92
+ S +DG
Sbjct: 921 EGNSGNDG 928
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 39/98 (39%), Gaps = 12/98 (12%)
Query: 24 STVISGRIGLDGRDGLPGE------------PGLDGIPGRNGMDGIPGKDGLPGKDGIPG 71
S G G +GR G PG+ PG G+PG G G G DG G+ G G
Sbjct: 131 SAGKPGEDGNNGRPGKPGDRGGPGTQGARGFPGTPGLPGMKGHRGYNGLDGRKGESGTAG 190
Query: 72 TNGTKTDHYAMGADTKSFSDGVLPSVQRAIAAGLVIYR 109
G H A G+ + S G+ RA AG R
Sbjct: 191 AKGETGAHGANGSPGPAGSRGLNGERGRAGPAGPAGAR 228
>sp|Q02388|CO7A1_HUMAN Collagen alpha-1(VII) chain OS=Homo sapiens GN=COL7A1 PE=1 SV=2
Length = 2944
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 28/61 (45%)
Query: 24 STVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMG 83
S G G G DG PG PG G PG G G+ G GLPG G PG G + G
Sbjct: 1291 SATAKGERGFPGADGRPGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPG 1350
Query: 84 A 84
A
Sbjct: 1351 A 1351
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 27 ISGRIGLDGRDG------LPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTK 76
+ G GLDG G PG PGL G G G G+PG+ G PGK+G+ G G +
Sbjct: 2630 VKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDR 2685
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKD--GIPGTNGTK 76
G G DG G PG PG G+PG G G PG G PG+ G+PG G K
Sbjct: 2263 GASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEK 2312
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 50 GRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMG 83
G+ G GIPG G PGKDG+PG G K D MG
Sbjct: 2587 GQPGAAGIPGDPGSPGKDGVPGIRGEKGDVGFMG 2620
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 34 DGRDGLPGEPGLDGIPGRNGMDGIPGKD------GLPGKDGIPGTNGTKTDHYAMGA 84
G GLPG+ G G PG G DG GKD G+PG G+PG G K + GA
Sbjct: 2241 QGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGA 2297
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 28 SGRIGLDGRDGLPGEPGLDGIPGR---NGMDGIPGKDGLPGKDGIPGTNGTK 76
+G G G GL G GLDG PG +G +G GK G PG+DG+PG G +
Sbjct: 1766 AGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKAGDPGRDGLPGLRGEQ 1817
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 35 GRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDH 79
G G PG GL G PG+ G+ G+PG+ G G+ G PG G + +
Sbjct: 2022 GERGPPGPSGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEK 2066
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 23/46 (50%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
G G G G PG PGL G PG G G PG+ G G G PG G
Sbjct: 1308 GSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPG 1353
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 34 DGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADTKSFSDGV 93
D DG PG PG G PG G G PG G G G PG G + G + S G
Sbjct: 1449 DSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPGPAGSRG- 1507
Query: 94 LPSV 97
LP V
Sbjct: 1508 LPGV 1511
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%)
Query: 24 STVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
S + G++G G+ G PG G G G G G+PG GLPG G G G
Sbjct: 2243 SPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPG 2293
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 9/46 (19%)
Query: 29 GRIGLDGRDGLPGEPGLDG---------IPGRNGMDGIPGKDGLPG 65
G+ GL+G++G PG+PG DG GR G DG G+ G PG
Sbjct: 1836 GKPGLNGKNGEPGDPGEDGRKGEKGDSGASGREGRDGPKGERGAPG 1881
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 38 GLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGA 84
GLPG G G PG G DG PG++G G G PG+ G + + +G+
Sbjct: 2466 GLPGPRGERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGS 2512
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 26/51 (50%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDH 79
G G G GL GEPG GIPG G G G+ G PG+ G G G + +
Sbjct: 2022 GERGPPGPSGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQ 2072
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 27/51 (52%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDH 79
GR GL G G GEPG+ G G G +G+ G G G DG PG G + +
Sbjct: 2650 GRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEK 2700
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTD 78
+ G G G GLPG G G GR G G PG+DG + G PG G K D
Sbjct: 2322 LVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDG---QKGAPGPKGFKGD 2370
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 27 ISGRIGLDGRDGL---PGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGT 75
+ G+ G G++GL G+ G DG PG G G G+ G PG G PG +G
Sbjct: 2666 VPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPGIGGFPGPSGN 2717
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 25/46 (54%)
Query: 29 GRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNG 74
G G+ G+ G PG+ GL G G G DG PG G G+ G GT G
Sbjct: 2662 GEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPG 2707
>sp|Q14055|CO9A2_HUMAN Collagen alpha-2(IX) chain OS=Homo sapiens GN=COL9A2 PE=1 SV=2
Length = 689
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 30/53 (56%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDH 79
+G G++G+DG PG PG+ G G+ G G PG GL G G PGT G D
Sbjct: 299 ATGPPGINGKDGTPGTPGMKGSAGQAGQPGSPGHQGLAGVPGQPGTKGGPGDQ 351
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%)
Query: 27 ISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPGTNGTKTDHYAMGADT 86
+ G G G+ G PG GL G+PG+ G G PG G PG G+PG +G G
Sbjct: 317 MKGSAGQAGQPGSPGHQGLAGVPGQPGTKGGPGDQGEPGPQGLPGFSGPPGKEGEPGPRG 376
Query: 87 KSFSDGVL 94
+ G++
Sbjct: 377 EIGPQGIM 384
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 20 GRAISTVISGRIGLDGRDGLPGEPGLDGIP---GRNGMDGIPGKDGLPGKDGIPGTNGTK 76
G A G G G G+PG+PG G P G G G+PG G PGK+G PG G
Sbjct: 319 GSAGQAGQPGSPGHQGLAGVPGQPGTKGGPGDQGEPGPQGLPGFSGPPGKEGEPGPRGEI 378
Query: 77 TDHYAMG 83
MG
Sbjct: 379 GPQGIMG 385
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 29/64 (45%)
Query: 12 EVHDRRDIGRAISTVISGRIGLDGRDGLPGEPGLDGIPGRNGMDGIPGKDGLPGKDGIPG 71
E R GRA G G+ G G+ G G G PG NG DG PG G+ G G G
Sbjct: 266 EEGPRGPPGRAGEKGDEGSPGIRGPQGITGPKGATGPPGINGKDGTPGTPGMKGSAGQAG 325
Query: 72 TNGT 75
G+
Sbjct: 326 QPGS 329
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.144 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,663,435
Number of Sequences: 539616
Number of extensions: 2417512
Number of successful extensions: 38249
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 5041
Number of HSP's gapped (non-prelim): 18206
length of query: 111
length of database: 191,569,459
effective HSP length: 79
effective length of query: 32
effective length of database: 148,939,795
effective search space: 4766073440
effective search space used: 4766073440
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)