Query         psy69
Match_columns 157
No_of_seqs    160 out of 1298
Neff          10.0
Searched_HMMs 29240
Date          Fri Aug 16 21:20:18 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy69.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/69hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4gc0_A D-xylose-proton symport  99.8 7.3E-20 2.5E-24  140.5  11.1  136   19-155    52-239 (491)
  2 3o7q_A L-fucose-proton symport  99.7 2.2E-16 7.6E-21  119.3  10.4  121   15-136    54-177 (438)
  3 2gfp_A EMRD, multidrug resista  99.6 1.1E-15 3.7E-20  113.6  11.0  120   15-135    28-147 (375)
  4 1pw4_A Glycerol-3-phosphate tr  99.6 1.5E-15 5.1E-20  115.0   8.7  117   16-134    57-177 (451)
  5 4aps_A DI-OR tripeptide H+ sym  99.6 4.1E-15 1.4E-19  114.1  11.0  120   15-135    47-169 (491)
  6 2xut_A Proton/peptide symporte  99.5 7.6E-14 2.6E-18  107.9   9.6  114   19-133    51-169 (524)
  7 1pw4_A Glycerol-3-phosphate tr  99.2 2.5E-10 8.4E-15   86.3  11.8  122   16-138   282-409 (451)
  8 2cfq_A Lactose permease; trans  99.2 2.1E-10 7.3E-15   86.6   9.9  115   21-136   258-373 (417)
  9 3o7q_A L-fucose-proton symport  99.0 1.7E-09 5.9E-14   81.4   9.4  119   16-138   289-407 (438)
 10 2cfq_A Lactose permease; trans  98.9 5.2E-10 1.8E-14   84.5   2.6   91   16-107    37-131 (417)
 11 4aps_A DI-OR tripeptide H+ sym  98.8 1.9E-09 6.4E-14   82.6   4.3  112   26-137   322-447 (491)
 12 4gc0_A D-xylose-proton symport  98.8 8.7E-08   3E-12   73.2  11.5  105   19-124   309-418 (491)
 13 2gfp_A EMRD, multidrug resista  98.6 2.6E-08 8.8E-13   73.7   2.7  116   17-136   230-350 (375)
 14 2xut_A Proton/peptide symporte  97.9 1.5E-06 5.1E-11   67.0   0.4  104   34-137   346-466 (524)
 15 2g9p_A Antimicrobial peptide l  63.2     4.4 0.00015   17.0   1.5   14   42-55      2-15  (26)
 16 4dve_A Biotin transporter BIOY  39.0      86  0.0029   21.0   5.9   23   31-53    101-123 (198)
 17 2jpj_A Bacteriocin lactococcin  34.4      30   0.001   16.2   1.9   26   29-54     12-37  (39)

No 1  
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*
Probab=99.82  E-value=7.3e-20  Score=140.47  Aligned_cols=136  Identities=20%  Similarity=0.254  Sum_probs=116.4

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhccchhhhhhhHHHHHHHHHHH------------------HhcCHHHHH
Q psy69            19 IYKQQVLFVAASLGVISNPLGALLSGTIMEVWGRKTTLQVASIPFFFGWLLMA------------------FADDVLQLC   80 (157)
Q Consensus        19 ~~~~~~~~~~~~~~~~g~~i~~~~~g~l~d~~grk~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~   80 (157)
                      .++.+. +++.+.+.+|..+|+++.|+++||+|||++++++.+++.++.++++                  ++++++.++
T Consensus        52 ~~~~~~-g~~~s~~~~G~~iG~~~~G~laDr~GRk~~l~~~~~l~~i~~i~~a~~~~~~~~~~~~~~~~~~~a~~~~~l~  130 (491)
T 4gc0_A           52 AANSLL-GFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFV  130 (491)
T ss_dssp             HHHHHH-HHHHHTHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHCTTTTTSCSSSSSSCCGGGGGCHHHHH
T ss_pred             cHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcchhHHHHHHhhhHHHHH
Confidence            345566 8999999999999999999999999999999999999999999888                  478999999


Q ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------------------------
Q psy69            81 IGRFITGVAIGKSELNHQLFMTALVVILMASLSAHSVNMSIGMCQGFSAVL-----------------------------  131 (157)
Q Consensus        81 ~~~~l~G~~~g~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~~~~~~~~~-----------------------------  131 (157)
                      ++|++.|++.|...+..+.+++|..|+++|++..+..+.....|..++..+                             
T Consensus       131 ~~R~l~G~g~G~~~~~~~~~i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (491)
T 4gc0_A          131 IYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPA  210 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTTTTHHHHHHHTTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcchhhccccccccccchhhHHHhhhhhhhh
Confidence            999999999999999999999999999999999988777766554444322                             


Q ss_pred             -----hhccccCCcccccCCCChhhhhhc
Q psy69           132 -----LPQLHRESSHILVTPGEASWIGKI  155 (157)
Q Consensus       132 -----~~~~~~~~~~~~~~~~~~~w~~~~  155 (157)
                           .....||+|+|+..+++.++.++.
T Consensus       211 ~~~~~~~~~~peSp~~L~~~~~~~~a~~~  239 (491)
T 4gc0_A          211 LLFLMLLYTVPESPRWLMSRGKQEQAEGI  239 (491)
T ss_dssp             HHHHHHGGGSCCCHHHHHHTTCHHHHHHH
T ss_pred             hhhhhhhhcCCCChHHHHHcCchhHHHHh
Confidence                 233458999999988888776654


No 2  
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*
Probab=99.68  E-value=2.2e-16  Score=119.29  Aligned_cols=121  Identities=15%  Similarity=0.068  Sum_probs=114.8

Q ss_pred             CcccccHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhccchhhhhhhHHHHHHHHHH---HHhcCHHHHHHHHHHHHhhhh
Q psy69            15 DRRIIYKQQVLFVAASLGVISNPLGALLSGTIMEVWGRKTTLQVASIPFFFGWLLM---AFADDVLQLCIGRFITGVAIG   91 (157)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~g~~i~~~~~g~l~d~~grk~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~G~~~g   91 (157)
                      ++++.++.+. +++.+.+.++..++.++.|+++||+|||+.++.+.+...++.++.   .++++++.++++|++.|++.+
T Consensus        54 ~~~g~s~~~~-g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~  132 (438)
T 3o7q_A           54 QAFTLTNFQA-GLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLG  132 (438)
T ss_dssp             HHSCCCSHHH-HHHHHHHHHHHHTTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred             HHcCCCHHHH-HHHHHHHHHHHHHHHHhHHHHHHHhcchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhhHH
Confidence            4478899999 999999999999999999999999999999999999999999988   788999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q psy69            92 KSELNHQLFMTALVVILMASLSAHSVNMSIGMCQGFSAVLLPQLH  136 (157)
Q Consensus        92 ~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (157)
                      ...+....++.|++|+++|++..+..+....+|..+++.+...+.
T Consensus       133 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~  177 (438)
T 3o7q_A          133 CLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI  177 (438)
T ss_dssp             HHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTHHH
T ss_pred             HhhhhHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999988876


No 3  
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}
Probab=99.65  E-value=1.1e-15  Score=113.65  Aligned_cols=120  Identities=14%  Similarity=0.134  Sum_probs=109.8

Q ss_pred             CcccccHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhccchhhhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhhhhH
Q psy69            15 DRRIIYKQQVLFVAASLGVISNPLGALLSGTIMEVWGRKTTLQVASIPFFFGWLLMAFADDVLQLCIGRFITGVAIGKSE   94 (157)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~g~~i~~~~~g~l~d~~grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~   94 (157)
                      ++++.++.+. +++.+...++..+++++.|+++||+|||+.+..+.....++..+..+.++++.+++.|++.|++.+...
T Consensus        28 ~~~g~s~~~~-g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~  106 (375)
T 2gfp_A           28 RDLNVREGAV-QSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGMGTGVGG  106 (375)
T ss_dssp             TTSSSTTHHH-HHHHHHHHHHHHHHHTTHHHHHTTSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHhhh
Confidence            4478899999 999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy69            95 LNHQLFMTALVVILMASLSAHSVNMSIGMCQGFSAVLLPQL  135 (157)
Q Consensus        95 ~~~~~~~~~~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~  135 (157)
                      +....++.|.+|+++|++..+..+....++..+++.+.+.+
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l  147 (375)
T 2gfp_A          107 VMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLL  147 (375)
T ss_dssp             HHHHHHHHHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             hhHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence            99999999999999999999988888888777776665444


No 4  
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1
Probab=99.61  E-value=1.5e-15  Score=115.03  Aligned_cols=117  Identities=14%  Similarity=0.045  Sum_probs=107.0

Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhccchhhhhhhHHHHHHHHHHHH----hcCHHHHHHHHHHHHhhhh
Q psy69            16 RRIIYKQQVLFVAASLGVISNPLGALLSGTIMEVWGRKTTLQVASIPFFFGWLLMAF----ADDVLQLCIGRFITGVAIG   91 (157)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~g~~i~~~~~g~l~d~~grk~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~G~~~g   91 (157)
                      ++ .++.+. +++.+.+.++..+++++.|+++||+|||+.++.+.++..++.++..+    +++++.++++|++.|++.+
T Consensus        57 ~~-~s~~~~-g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~  134 (451)
T 1pw4_A           57 QG-FSRGDL-GFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQG  134 (451)
T ss_dssp             ST-TCSSCH-HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHHHHHHHHHHHHHH
T ss_pred             Hh-ccHhHH-HHHHHHHHHHHHHHHHhHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhccccHHHHHHHHHHHHHHhh
Confidence            35 788889 99999999999999999999999999999999999999999999999    8999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy69            92 KSELNHQLFMTALVVILMASLSAHSVNMSIGMCQGFSAVLLPQ  134 (157)
Q Consensus        92 ~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~  134 (157)
                      ...+....++.|++|+++|++..+..+....+|..+++.+.+.
T Consensus       135 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~  177 (451)
T 1pw4_A          135 MGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLL  177 (451)
T ss_dssp             HTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHH
T ss_pred             hccchHHHHHHHHCCchhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999888888777766655543


No 5  
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}
Probab=99.61  E-value=4.1e-15  Score=114.12  Aligned_cols=120  Identities=9%  Similarity=0.052  Sum_probs=107.1

Q ss_pred             CcccccHHHHHHHHHHHHHHHHHHHHHhHHHHHhH-hccchhhhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhhhh
Q psy69            15 DRRIIYKQQVLFVAASLGVISNPLGALLSGTIMEV-WGRKTTLQVASIPFFFGWLLMAFADDVLQLCIGRFITGVAIGKS   93 (157)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~g~~i~~~~~g~l~d~-~grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~   93 (157)
                      ++++.++.+. +++.+.+.++..+++++.|+++|| +|||+++..+.++..++.++..++++++.++++|++.|++.+..
T Consensus        47 ~~~~~s~~~~-~~~~~~~~~~~~~~~~~~g~l~dr~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~  125 (491)
T 4aps_A           47 GDLHITRATA-ASIMAIYASMVYLSGTIGGFVADRIIGARPAVFWGGVLIMLGHIVLALPFGASALFGSIILIIIGTGFL  125 (491)
T ss_dssp             TSCCSCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCSTTHHHHHHHHHHHHHHHH
T ss_pred             hhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence            3478999999 999999999999999999999999 89999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy69            94 ELNHQLFMTALVVILM--ASLSAHSVNMSIGMCQGFSAVLLPQL  135 (157)
Q Consensus        94 ~~~~~~~~~~~~p~~~--r~~~~~~~~~~~~~~~~~~~~~~~~~  135 (157)
                      .+....++.|.+|+++  |+...+..+....+|..+++.+.+.+
T Consensus       126 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l  169 (491)
T 4aps_A          126 KPNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFIAPLIVGAA  169 (491)
T ss_dssp             HHHHHHHHHHHSSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHcCcccccceeeehHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999988  66677777777777777776555443


No 6  
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}
Probab=99.50  E-value=7.6e-14  Score=107.92  Aligned_cols=114  Identities=19%  Similarity=0.204  Sum_probs=101.7

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhHHHHHhHh-ccchhhhhhhHHHHHHHHHHHHhc-CHHHHHHHHHHHHhhhhhhHHH
Q psy69            19 IYKQQVLFVAASLGVISNPLGALLSGTIMEVW-GRKTTLQVASIPFFFGWLLMAFAD-DVLQLCIGRFITGVAIGKSELN   96 (157)
Q Consensus        19 ~~~~~~~~~~~~~~~~g~~i~~~~~g~l~d~~-grk~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~g~~~~~   96 (157)
                      .++.+. +++.+.+.++..++.++.|+++||+ |||+.+..+.++..++.++..+++ +++.+++.|++.|++.+...+.
T Consensus        51 ~s~~~~-g~~~~~~~~~~~~~~~~~G~l~dr~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~  129 (524)
T 2xut_A           51 LRGAVA-KDVFHSFVIGVYFFPLLGGWIADRFFGKYNTILWLSLIYCVGHAFLAIFEHSVQGFYTGLFLIALGSGGIKPL  129 (524)
T ss_dssp             TTTTTH-HHHHHHHHHHHHHTHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHTTHHH
T ss_pred             cCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchh
Confidence            888999 9999999999999999999999999 999999999999999999999998 9999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhhh
Q psy69            97 HQLFMTALVVILMASLSAHS---VNMSIGMCQGFSAVLLP  133 (157)
Q Consensus        97 ~~~~~~~~~p~~~r~~~~~~---~~~~~~~~~~~~~~~~~  133 (157)
                      ..+++.|.+|+++|++..+.   .+....+|..+++.+.+
T Consensus       130 ~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~g~~~~~  169 (524)
T 2xut_A          130 VSSFMGDQFDQSNKSLAQKAFDMFYFTINFGSFFASLSMP  169 (524)
T ss_dssp             HHHHHHHTCSTTTTTHHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred             HHHHHHHHcCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999766655   66666777666655543


No 7  
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1
Probab=99.19  E-value=2.5e-10  Score=86.29  Aligned_cols=122  Identities=12%  Similarity=-0.025  Sum_probs=103.8

Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHhHHHHHhHh--ccchhhhhhhHHHH-HHHHHHHHh--cCHHHHHHHHHHHHhhh
Q psy69            16 RRIIYKQQVLFVAASLGVISNPLGALLSGTIMEVW--GRKTTLQVASIPFF-FGWLLMAFA--DDVLQLCIGRFITGVAI   90 (157)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~g~~i~~~~~g~l~d~~--grk~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~l~G~~~   90 (157)
                      ..+.++.+. ++..+...++..++.++.+++.||+  |||+.+..+..+.. ++..+..+.  .+.+...+..++.|++.
T Consensus       282 ~~g~~~~~~-~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  360 (451)
T 1pw4_A          282 VKHFALDKS-SWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLI  360 (451)
T ss_dssp             BSCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             hcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHH
Confidence            467899999 9999999999999999999999999  99998887776665 555555444  36777778888999998


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhhccccC
Q psy69            91 GKSELNHQLFMTALVVILMASLSAHSVNMSIGM-CQGFSAVLLPQLHRE  138 (157)
Q Consensus        91 g~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  138 (157)
                      +...+....++.|.+|++.|++..+..+....+ +..+++.+.+.+.+.
T Consensus       361 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~g~l~~~  409 (451)
T 1pw4_A          361 YGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF  409 (451)
T ss_dssp             THHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             hchHHHHHHHHHHHhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            888888899999999999999999999999998 999998888777653


No 8  
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*
Probab=99.15  E-value=2.1e-10  Score=86.63  Aligned_cols=115  Identities=13%  Similarity=0.088  Sum_probs=90.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHHHHhHhccchhhhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhhhhHHHHHHH
Q psy69            21 KQQVLFVAASLGVISNPLGALLSGTIMEVWGRKTTLQVASIPFFFGWLLMAFADDVLQLCIGRFITGVAIGKSELNHQLF  100 (157)
Q Consensus        21 ~~~~~~~~~~~~~~g~~i~~~~~g~l~d~~grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~  100 (157)
                      ..+. +...+...++..++.++.++++||+|||+.+..+....++......+.++.+.+.+..++.+++.+........+
T Consensus       258 ~~~~-g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  336 (417)
T 2cfq_A          258 TRVF-GYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKY  336 (417)
T ss_dssp             THHH-HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred             hhHH-HHHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3455 666777777888899999999999999999888887777766666666777777777778888777777777889


Q ss_pred             HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhccc
Q psy69           101 MTALVVILMASLSAHS-VNMSIGMCQGFSAVLLPQLH  136 (157)
Q Consensus       101 ~~~~~p~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~  136 (157)
                      ++|.+|++.|++..+. .+...+++..+++.+.+.+.
T Consensus       337 ~~~~~p~~~~g~~~g~~~~~~~~lg~~~gp~l~G~l~  373 (417)
T 2cfq_A          337 ITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMY  373 (417)
T ss_dssp             HHHHSCHHHHHHHHHHHHTTTHHHHHHHHTHHHHTHH
T ss_pred             HHHHCCHHHHHHHHHHHHHHHHhHHHHHhhhhHHHHH
Confidence            9999999999998886 46666667666666655543


No 9  
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*
Probab=99.01  E-value=1.7e-09  Score=81.43  Aligned_cols=119  Identities=7%  Similarity=-0.068  Sum_probs=97.2

Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhccchhhhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhhhhHH
Q psy69            16 RRIIYKQQVLFVAASLGVISNPLGALLSGTIMEVWGRKTTLQVASIPFFFGWLLMAFADDVLQLCIGRFITGVAIGKSEL   95 (157)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~g~~i~~~~~g~l~d~~grk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~g~~~~   95 (157)
                      .++.++.+. +...+...++..++.++.+++.||+|||+.+..+.+...++..+..+.++.+... ..++.|++.+...+
T Consensus       289 ~~g~~~~~~-~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~  366 (438)
T 3o7q_A          289 IPGMTAGFA-ANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLI-ALTLCSAFMSIQYP  366 (438)
T ss_dssp             STTCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH-HHHHHHHHHTTHHH
T ss_pred             cCCcchhHH-HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHcCCcHHHH-HHHHHHHHHHHHHH
Confidence            357888999 9999999999999999999999999999999998888888877777776665443 44888899998899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccC
Q psy69            96 NHQLFMTALVVILMASLSAHSVNMSIGMCQGFSAVLLPQLHRE  138 (157)
Q Consensus        96 ~~~~~~~~~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (157)
                      ....+..|.+|++ ++...+... ...++..+++.+.+.+.+.
T Consensus       367 ~~~~~~~~~~~~~-~~~~~~~~~-~~~~g~~~~~~~~g~l~~~  407 (438)
T 3o7q_A          367 TIFSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSDA  407 (438)
T ss_dssp             HHHHHHHSSCGGG-HHHHHHHHH-HTTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhcccc-ccchhhHHH-HHHHHHHHHHHHHHHHHHH
Confidence            9999999999977 777776555 3447788888887777653


No 10 
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*
Probab=98.89  E-value=5.2e-10  Score=84.49  Aligned_cols=91  Identities=13%  Similarity=0.089  Sum_probs=59.5

Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhccchhhhhhhHHHHHHHH---HHHHhcCHH-HHHHHHHHHHhhhh
Q psy69            16 RRIIYKQQVLFVAASLGVISNPLGALLSGTIMEVWGRKTTLQVASIPFFFGWL---LMAFADDVL-QLCIGRFITGVAIG   91 (157)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~g~~i~~~~~g~l~d~~grk~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~l~G~~~g   91 (157)
                      +++.++.+. +++.+...++..+++++.|+++||+|||+.++++.....+...   ...+.+... .....+.+.+++.+
T Consensus        37 ~~g~s~~~~-g~~~~~~~~~~~i~~~~~G~lsDr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  115 (417)
T 2cfq_A           37 INHISKSDT-GIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLG  115 (417)
T ss_dssp             TTCCCTTTS-HHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHHHHHTTSCHHHHHHHTHHHHHHTTCCHHHHGGGSSTT
T ss_pred             HhCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            467889999 9999999999999999999999999999998887766544221   111221111 12344555555555


Q ss_pred             hhHHHHHHHHHHHHHH
Q psy69            92 KSELNHQLFMTALVVI  107 (157)
Q Consensus        92 ~~~~~~~~~~~~~~p~  107 (157)
                      ...+.......++.++
T Consensus       116 ~~~~~~~~~~~~~~~~  131 (417)
T 2cfq_A          116 FCFNAGAPAVEAFIEK  131 (417)
T ss_dssp             HHHHTTHHHHHHHHHH
T ss_pred             HHHhhhHHHHHHHHHH
Confidence            4444334444444443


No 11 
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}
Probab=98.84  E-value=1.9e-09  Score=82.56  Aligned_cols=112  Identities=15%  Similarity=0.005  Sum_probs=89.0

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHhHhccchhhh-----hhhHHHHHHHHHHHHhc---------CHHHHHHHHHHHHhhhh
Q psy69            26 FVAASLGVISNPLGALLSGTIMEVWGRKTTLQ-----VASIPFFFGWLLMAFAD---------DVLQLCIGRFITGVAIG   91 (157)
Q Consensus        26 ~~~~~~~~~g~~i~~~~~g~l~d~~grk~~~~-----~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~G~~~g   91 (157)
                      +...+...++..++.++.+++.||+|||+...     .+..+..++..+..+..         +.+...+..++.|++.+
T Consensus       322 ~~~~~~~~~~~~~~~~~~~~l~~r~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~  401 (491)
T 4aps_A          322 SWFQSLNPLFIMLYTPFFAWLWTAWKKNQPSSPTKFAVGLMFAGLSFLLMAIPGALYGTSGKVSPLWLVGSWALVILGEM  401 (491)
T ss_dssp             GGGTTHHHHHHHHHHHHHHHHHHHTTTC---CHHHHHHHHHHHHHHHTTTHHHHHHCCCCTTCCTHHHHHHHHHHHHHHH
T ss_pred             HHHhccchHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHH
Confidence            55566777888888999999999999987655     55566566555544432         66777788889999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q psy69            92 KSELNHQLFMTALVVILMASLSAHSVNMSIGMCQGFSAVLLPQLHR  137 (157)
Q Consensus        92 ~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (157)
                      ...+....++.|.+|++.|++..+..+....++..+++.+.+.+.+
T Consensus       402 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~i~~~~~~~~~~  447 (491)
T 4aps_A          402 LISPVGLSVTTKLAPKAFNSQMMSMWFLSSSVGSALNAQLVTLYNA  447 (491)
T ss_dssp             TTTTHHHHHHHHHTTTTCSSSSTHHHHHHHHHHHHHHHHHGGGGGG
T ss_pred             HHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            8888999999999999999999999999999999999888877754


No 12 
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*
Probab=98.77  E-value=8.7e-08  Score=73.22  Aligned_cols=105  Identities=8%  Similarity=0.015  Sum_probs=69.6

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhccchhhhhhhHHHHHHHHHHHHh----cCHHHHHHHHHHHHhhh-hhh
Q psy69            19 IYKQQVLFVAASLGVISNPLGALLSGTIMEVWGRKTTLQVASIPFFFGWLLMAFA----DDVLQLCIGRFITGVAI-GKS   93 (157)
Q Consensus        19 ~~~~~~~~~~~~~~~~g~~i~~~~~g~l~d~~grk~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~G~~~-g~~   93 (157)
                      .+.... ........+...++.++.+++.||+|||+.++.+.....++.......    .+....++...+...+. ...
T Consensus       309 ~~~~~~-~~~~~~~~~~~~~~~~~~~~l~dr~Grr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (491)
T 4gc0_A          309 ASTDIA-LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSW  387 (491)
T ss_dssp             CCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTT
T ss_pred             CCccch-hhHHHHHHHHHHHHHHHHHHHHHhhcCcchhccchHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhHH
Confidence            444555 556666778888999999999999999999988888777766554432    12222222222222222 222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy69            94 ELNHQLFMTALVVILMASLSAHSVNMSIGMC  124 (157)
Q Consensus        94 ~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~~  124 (157)
                      .+....+.+|.+|++.|++..+.......++
T Consensus       388 ~~~~~~~~~E~fPt~~R~~~~g~~~~~~~~~  418 (491)
T 4gc0_A          388 GPVCWVLLSEIFPNAIRGKALAIAVAAQWLA  418 (491)
T ss_dssp             THHHHHHHHHSSCTTTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCHhHHHHHHHHHHHHHHHH
Confidence            4567789999999999999887655544433


No 13 
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}
Probab=98.55  E-value=2.6e-08  Score=73.72  Aligned_cols=116  Identities=15%  Similarity=0.032  Sum_probs=86.6

Q ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHhHHHHHhHhccchhhhhhhHH-HHHHHH--HHHH--hcCHHHHHHHHHHHHhhhh
Q psy69            17 RIIYKQQVLFVAASLGVISNPLGALLSGTIMEVWGRKTTLQVASIP-FFFGWL--LMAF--ADDVLQLCIGRFITGVAIG   91 (157)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~g~~i~~~~~g~l~d~~grk~~~~~~~~~-~~~~~~--~~~~--~~~~~~~~~~~~l~G~~~g   91 (157)
                      .+.++.+. +...+...++..++.++.+++.||++++.  ..+... ...+..  ....  .++.+...+..++.|++.+
T Consensus       230 ~g~~~~~~-g~~~~~~~~~~~~~~~~~~~l~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~  306 (375)
T 2gfp_A          230 LGLSSMTV-SILFILPIPAAFFGAWFAGRPNKRFSTLM--WQSVICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFFGAG  306 (375)
T ss_dssp             HHHHHHHH-HHHHHTHHHHHHHHHHHHHTTTTHHHHHH--HHHHHHHHHTSSSSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHH
Confidence            56788888 99999999999999999999999998832  222222 222211  1222  2356666778888999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q psy69            92 KSELNHQLFMTALVVILMASLSAHSVNMSIGMCQGFSAVLLPQLH  136 (157)
Q Consensus        92 ~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (157)
                      ...+....+..|..| ++|++..+..+....++..+++.+.+.+.
T Consensus       307 ~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~  350 (375)
T 2gfp_A          307 MLFPLATSGAMEPFP-FLAGTAGALVGGLQNIGSGVLASLSAMLP  350 (375)
T ss_dssp             HTSSTTHHHHHTHHH-HHHHHHHHHHHHHHHHHHHCCSTTCTHHH
T ss_pred             HhhHHHHHHHHHhCC-cccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999998 89999999988888777777766665553


No 14 
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}
Probab=97.93  E-value=1.5e-06  Score=66.99  Aligned_cols=104  Identities=8%  Similarity=-0.018  Sum_probs=73.6

Q ss_pred             HHHHHHHHhHHHHH----hHhccc----hhhhhhhHHHHHHHHHHHHh---------cCHHHHHHHHHHHHhhhhhhHHH
Q psy69            34 ISNPLGALLSGTIM----EVWGRK----TTLQVASIPFFFGWLLMAFA---------DDVLQLCIGRFITGVAIGKSELN   96 (157)
Q Consensus        34 ~g~~i~~~~~g~l~----d~~grk----~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~G~~~g~~~~~   96 (157)
                      ++..+..++.+.+.    ||.|+|    +.+..+.++..++..+..+.         .+.+.+.+..++.|++.+...+.
T Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~  425 (524)
T 2xut_A          346 LLVMLLIPFNNFVLYPAIERMGVKLTALRKMGAGIAITGLSWIVVGTIQLMMDGGSALSIFWQILPYALLTFGEVLVSAT  425 (524)
T ss_dssp             GGHHHHGGGTTTC------------CCHHHHHTHHHHHHHHHHTTTTTTTTTTTTCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhHHHHHhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHH
Confidence            34444455544443    444432    34556666666665555443         25667777889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q psy69            97 HQLFMTALVVILMASLSAHSVNMSIGMCQGFSAVLLPQLHR  137 (157)
Q Consensus        97 ~~~~~~~~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (157)
                      ...++.|.+|++.|++..+..+....+|..+++.+.+.+.+
T Consensus       426 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~~~~  466 (524)
T 2xut_A          426 GLEFAYSQAPKAMKGTIMSFWTLSVTVGNLWVLLANVSVKS  466 (524)
T ss_dssp             HTTTHHHHCCTTCCTTTHHHHGGGHHHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHhCcHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999888877754


No 15 
>2g9p_A Antimicrobial peptide latarcin 2A; helix-hinge-helix, antimicrobial protein; NMR {Synthetic}
Probab=63.16  E-value=4.4  Score=17.00  Aligned_cols=14  Identities=36%  Similarity=0.733  Sum_probs=10.9

Q ss_pred             hHHHHHhHhccchh
Q psy69            42 LSGTIMEVWGRKTT   55 (157)
Q Consensus        42 ~~g~l~d~~grk~~   55 (157)
                      +.|.+..++|||..
T Consensus         2 lfgklikkfgrkai   15 (26)
T 2g9p_A            2 LFGKLIKKFGRKAI   15 (26)
T ss_dssp             HHHHHHHHHTSHHH
T ss_pred             cHHHHHHHHhHHHH
Confidence            35778899999864


No 16 
>4dve_A Biotin transporter BIOY; ECF-transport, ligand-binding domain, biotin binding, membra transport protein; HET: BTN BNG; 2.09A {Lactococcus lactis subsp}
Probab=39.00  E-value=86  Score=21.00  Aligned_cols=23  Identities=13%  Similarity=-0.029  Sum_probs=18.1

Q ss_pred             HHHHHHHHHHHhHHHHHhHhccc
Q psy69            31 LGVISNPLGALLSGTIMEVWGRK   53 (157)
Q Consensus        31 ~~~~g~~i~~~~~g~l~d~~grk   53 (157)
                      .+.+|..+++.+.|++.||..++
T Consensus       101 GYLiGF~~aA~v~G~l~~~~~~~  123 (198)
T 4dve_A          101 GYRIAWLFTPFLIGFFLKKLKIT  123 (198)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTGG
T ss_pred             HHHHHHHHHHHHHHHHHHHcccc
Confidence            36678888899999999986544


No 17 
>2jpj_A Bacteriocin lactococcin-G subunit alpha; peptide, anti-microbial, membrane bound, antimicrobial protein; NMR {Lactococcus lactis} PDB: 2jpl_A
Probab=34.37  E-value=30  Score=16.20  Aligned_cols=26  Identities=19%  Similarity=0.096  Sum_probs=19.4

Q ss_pred             HHHHHHHHHHHHHhHHHHHhHhccch
Q psy69            29 ASLGVISNPLGALLSGTIMEVWGRKT   54 (157)
Q Consensus        29 ~~~~~~g~~i~~~~~g~l~d~~grk~   54 (157)
                      -..+-++-.+|.+.----+||+.||+
T Consensus        12 ~aaywv~k~lgnmsdvnqa~rinrkk   37 (39)
T 2jpj_A           12 RVAYWVGKALGNLSDVNQASRINRKK   37 (39)
T ss_dssp             HHHHHHHHHHTSCSHHHHHHHHHGGG
T ss_pred             HHHHHHHHHhcchhhhhHHHHhhhhc
Confidence            44566777777777777888998886


Done!