Query psy6903
Match_columns 249
No_of_seqs 136 out of 1319
Neff 7.7
Searched_HMMs 29240
Date Fri Aug 16 21:25:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6903.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6903hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2o9g_A Aquaporin Z; integral m 100.0 5.3E-45 1.8E-49 313.2 21.0 215 29-245 6-233 (234)
2 3llq_A Aquaporin Z 2; aquapori 100.0 4.9E-45 1.7E-49 316.1 20.2 210 29-242 31-253 (256)
3 3cn5_A Aquaporin; membrane pro 100.0 1.9E-44 6.3E-49 319.4 19.8 210 29-245 62-290 (304)
4 3iyz_A Aquaporin-4; water tran 100.0 3.8E-44 1.3E-48 319.6 18.9 203 29-242 53-269 (340)
5 1ldf_A Glycerol uptake facilit 100.0 1E-43 3.5E-48 312.8 21.4 214 29-243 9-256 (281)
6 3gd8_A Aquaporin-4; proton exc 100.0 1.2E-43 4E-48 302.7 20.7 203 29-242 5-221 (223)
7 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 3.1E-43 1.1E-47 307.0 20.8 205 29-244 13-228 (266)
8 2b6o_A Aquaporin-0, lens fiber 100.0 6.9E-43 2.4E-47 304.6 21.4 204 29-243 11-224 (263)
9 2zz9_A Aquaporin-4; water tran 100.0 2.5E-43 8.5E-48 311.6 18.2 204 29-243 14-231 (301)
10 2w2e_A AQY1, aquaporin, aquapo 100.0 3.1E-42 1.1E-46 302.4 22.8 202 29-243 46-265 (279)
11 3c02_A Aquaglyceroporin; membr 100.0 9.9E-43 3.4E-47 303.1 18.5 212 29-243 11-243 (258)
12 2f2b_A Aquaporin AQPM; protein 100.0 6.7E-42 2.3E-46 296.1 23.2 209 29-244 6-246 (246)
13 1j4n_A Aquaporin 1; membrane p 100.0 1.9E-42 6.5E-47 303.1 19.8 204 29-243 12-234 (271)
14 2b6o_A Aquaporin-0, lens fiber 99.1 3.6E-10 1.2E-14 98.0 9.4 99 145-245 7-111 (263)
15 2f2b_A Aquaporin AQPM; protein 99.0 1.3E-09 4.6E-14 93.6 10.0 92 29-121 145-244 (246)
16 3llq_A Aquaporin Z 2; aquapori 98.7 2.4E-08 8.3E-13 86.1 8.7 98 145-244 27-133 (256)
17 3d9s_A Aquaporin-5, AQP-5; aqu 98.7 2.1E-08 7.2E-13 87.0 7.9 98 145-244 9-112 (266)
18 2o9g_A Aquaporin Z; integral m 98.6 1.5E-07 5E-12 80.2 8.7 96 147-244 4-108 (234)
19 2zz9_A Aquaporin-4; water tran 98.6 2.7E-07 9.1E-12 81.3 9.8 99 144-244 9-117 (301)
20 3c02_A Aquaglyceroporin; membr 98.5 2.2E-07 7.6E-12 80.2 8.4 97 146-244 8-112 (258)
21 1ldf_A Glycerol uptake facilit 98.5 3.6E-07 1.2E-11 79.9 8.4 97 146-244 6-110 (281)
22 3gd8_A Aquaporin-4; proton exc 98.5 3.7E-07 1.3E-11 77.2 8.2 98 146-245 2-109 (223)
23 1j4n_A Aquaporin 1; membrane p 98.4 5E-07 1.7E-11 78.5 8.2 97 146-244 9-120 (271)
24 3cn5_A Aquaporin; membrane pro 98.4 3.6E-07 1.2E-11 80.6 7.3 98 145-244 58-166 (304)
25 3iyz_A Aquaporin-4; water tran 98.4 3.4E-07 1.2E-11 81.6 7.1 97 146-244 50-156 (340)
26 2w2e_A AQY1, aquaporin, aquapo 98.4 6.8E-07 2.3E-11 78.0 8.3 97 146-244 43-154 (279)
27 4fc4_A Nitrite transporter NIR 38.1 1.4E+02 0.0048 24.9 8.3 87 81-168 83-171 (261)
28 3s2u_A UDP-N-acetylglucosamine 31.9 7.2 0.00025 34.1 -0.9 18 76-93 12-29 (365)
29 3kcu_A Probable formate transp 25.1 3.1E+02 0.011 23.1 14.9 86 81-168 93-182 (285)
No 1
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=5.3e-45 Score=313.21 Aligned_cols=215 Identities=16% Similarity=0.158 Sum_probs=166.6
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHhhh-----cchh----HHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHhccCchHHH
Q psy6903 29 QDLLLEVVATAELCASCYELIIVAD-----NWGV----YAYGVALYILTIWWSLNWDDASACPYTHLEDVAERRSNLLIA 99 (249)
Q Consensus 29 ~~~~~EfigT~~l~~~~~~~~~~~~-----~~g~----~~~g~~l~~~~~~~~~~~sGah~NPavTla~~l~g~~~~~~~ 99 (249)
|++++||+||++|+.......+..+ ..+. .++|+.+++.+... .++||||+|||||+++++.|++++++.
T Consensus 6 r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~-g~iSGaHlNPAVTla~~~~g~~~~~~~ 84 (234)
T 2o9g_A 6 RKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAV-GHISGGHFNPAVTIGLWAGGRFPAKEV 84 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHH-HHHHCCCCSHHHHHHHHHTTSSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHh-hccCcceeCHHHHHHHHHhCCCCHHHH
Confidence 6799999999998653322222221 1132 24566666555444 468999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh--hhhhhhhhccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcCC--ch
Q psy6903 100 LFKIGAELLGGYIIIKYIQLLWSLE--IAHVHVGQANTVYNCQADLQVPVLLGMLVEGVATFLCRFMSRVFAEKVP--KL 175 (249)
Q Consensus 100 ~~yi~aQ~~Ga~~g~~~~~~~~~~~--~~~~~~~~~~~~~~c~~~~~~s~~~~~~~E~~~Tf~l~~~v~~~~~~~~--~~ 175 (249)
+.|+++|++||++|+.+++.+++.. ++....+.......|+.+.+.+..++++.|+++||+|+++++.+.+++. ..
T Consensus 85 ~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~~~d~~~~~~~ 164 (234)
T 2o9g_A 85 VGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAGF 164 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHTSTTSCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHHhcCCCCccch
Confidence 9999999999999999999998642 1111011010122344555778999999999999999999998866432 24
Q ss_pred hhhHHHHHHHHHHHhhhccccccccchhhhhhhhccCCcccccceeehhhhhHHHHHHHHHHHHhhhccc
Q psy6903 176 SMILDATFGTLLVVAAFSYSGGYFNPALAGSLKYGCTGHTVTEHLVVYWLSPTIGSLLSVFAFNRMQASK 245 (249)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~~~~~~~~~~wVYwvgP~~Ga~la~~~~~~~~~~~ 245 (249)
.++.+++.+..+++.+++.||++|||||||||++..+ ...|+|+||||+||++|+++++++||++.++|
T Consensus 165 ~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g-~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~~ 233 (234)
T 2o9g_A 165 APIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQG-GWALEQLWFFWVVPIVGGIIGGLIYRTLLEKR 233 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHC-SHHHHSHHHHHHHHHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhC-CCCCceeeeeehHHhHHHHHHHHHHHHHcCCC
Confidence 5778888888888999999999999999999999864 34577999999999999999999999997754
No 2
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=4.9e-45 Score=316.05 Aligned_cols=210 Identities=14% Similarity=0.097 Sum_probs=164.5
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHhh-----hcchh----HHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHhccCchHHH
Q psy6903 29 QDLLLEVVATAELCASCYELIIVA-----DNWGV----YAYGVALYILTIWWSLNWDDASACPYTHLEDVAERRSNLLIA 99 (249)
Q Consensus 29 ~~~~~EfigT~~l~~~~~~~~~~~-----~~~g~----~~~g~~l~~~~~~~~~~~sGah~NPavTla~~l~g~~~~~~~ 99 (249)
|++++||+||++|+.......... ...++ .++|+.+++.+... .++||||+|||||+++++.|++++++.
T Consensus 31 r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~-g~iSGaHlNPAVTla~~~~g~~~~~~~ 109 (256)
T 3llq_A 31 RKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAV-GGISGGHFNPAVSVGLTVAGRFPASSL 109 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHH-HHHHCCCCSHHHHHHHHHTTSSCGGGH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHhee-eccccceEchHHHHHHHHhcCCCHHHH
Confidence 889999999999864322221111 11232 25566666655544 468999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh--hhhhhhhhccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcCC--ch
Q psy6903 100 LFKIGAELLGGYIIIKYIQLLWSLE--IAHVHVGQANTVYNCQADLQVPVLLGMLVEGVATFLCRFMSRVFAEKVP--KL 175 (249)
Q Consensus 100 ~~yi~aQ~~Ga~~g~~~~~~~~~~~--~~~~~~~~~~~~~~c~~~~~~s~~~~~~~E~~~Tf~l~~~v~~~~~~~~--~~ 175 (249)
+.|+++|++||++|+.+++.+++.. ++...... ....|+.|...+..++++.|+++||+|+++++.+.+++. ..
T Consensus 110 ~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~--~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~~~d~~~~~~~ 187 (256)
T 3llq_A 110 VPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFAS--NGYGEHSPGGYSLVSALLIEIILTAFFLIVILGSTHGRVPAGF 187 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTC--CCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHHSTTSCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccccccccccc--ccccccCCcccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc
Confidence 9999999999999999999988532 11110111 123455566788999999999999999999998765432 24
Q ss_pred hhhHHHHHHHHHHHhhhccccccccchhhhhhhhccCCcccccceeehhhhhHHHHHHHHHHHHhhh
Q psy6903 176 SMILDATFGTLLVVAAFSYSGGYFNPALAGSLKYGCTGHTVTEHLVVYWLSPTIGSLLSVFAFNRMQ 242 (249)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~~~~~~~~~~wVYwvgP~~Ga~la~~~~~~~~ 242 (249)
.++.+++.+..+.+.++++||++|||||||||++..+ ...|+++||||+||++|+++++++|+++.
T Consensus 188 ~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g-~~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 188 APIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVG-GWALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHC-HHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcC-CCcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 6788898888888899999999999999999998764 34578999999999999999999999996
No 3
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=1.9e-44 Score=319.44 Aligned_cols=210 Identities=16% Similarity=0.169 Sum_probs=166.3
Q ss_pred HHHHHHHHHHHHHHHhhHHHHH----h---hhcchh----HHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHhccCchH
Q psy6903 29 QDLLLEVVATAELCASCYELII----V---ADNWGV----YAYGVALYILTIWWSLNWDDASACPYTHLEDVAERRSNLL 97 (249)
Q Consensus 29 ~~~~~EfigT~~l~~~~~~~~~----~---~~~~g~----~~~g~~l~~~~~~~~~~~sGah~NPavTla~~l~g~~~~~ 97 (249)
|++++||+||++|+........ . ....+. +++|+.+++++++. ..+||||+|||||+++++.|+++++
T Consensus 62 r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~-g~iSGaHlNPAVTla~~l~g~~~~~ 140 (304)
T 3cn5_A 62 RAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCT-AGISGGHINPAVTFGLFLARKVELL 140 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHH-TTTTCCCCSHHHHHHHHHTTSSCHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEe-eccCCCccCcHHHHHHHHhCCCCHH
Confidence 8899999999998543221111 1 111232 25566666554443 4689999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHhhhc-C-Cc-
Q psy6903 98 IALFKIGAELLGGYIIIKYIQLLWSLEIAHVHVGQANTVYNCQADLQVPVLLGMLVEGVATFLCRFMSRVFAEK-V-PK- 174 (249)
Q Consensus 98 ~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~s~~~~~~~E~~~Tf~l~~~v~~~~~~-~-~~- 174 (249)
+++.|+++|++||++|+.+++.+++.++.....+. ..+..+.+..++++.|+++||+|+++++...++ + ++
T Consensus 141 ~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g~------~~~~~~~s~~~~f~~E~i~TfiLv~~Il~~~d~~~~~~~ 214 (304)
T 3cn5_A 141 RALVYMIAQCLGAICGVGLVKAFMKGPYNQFGGGA------NSVALGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARD 214 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHTTTTC------CCCCTTCCHHHHHHHHHHHHHHHHHHHHHTEEEEEESTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcc------cccCCCccHHHHHHHHHHHHHHHHHHHhheecCccCCCC
Confidence 99999999999999999999999876543322111 123456789999999999999999999977542 2 11
Q ss_pred -----hhhhHHHHHHHHHHHhhhccccccccchhhhhhhhccCCcccccceeehhhhhHHHHHHHHHHHHhhhccc
Q psy6903 175 -----LSMILDATFGTLLVVAAFSYSGGYFNPALAGSLKYGCTGHTVTEHLVVYWLSPTIGSLLSVFAFNRMQASK 245 (249)
Q Consensus 175 -----~~~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~~~~~~~~~~wVYwvgP~~Ga~la~~~~~~~~~~~ 245 (249)
..++.+++.+..+.+.++++||++|||||||||++.+.+.+.|+++||||+||++|+++++++|+++.+++
T Consensus 215 ~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~~~ 290 (304)
T 3cn5_A 215 SHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRAA 290 (304)
T ss_dssp SCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred cccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhCCC
Confidence 46788899998889999999999999999999998865566899999999999999999999999986653
No 4
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=3.8e-44 Score=319.64 Aligned_cols=203 Identities=17% Similarity=0.168 Sum_probs=157.8
Q ss_pred HHHHHHHHHHHHHHHhhHHHHH--hhh----cchh----HHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHhccCchHH
Q psy6903 29 QDLLLEVVATAELCASCYELII--VAD----NWGV----YAYGVALYILTIWWSLNWDDASACPYTHLEDVAERRSNLLI 98 (249)
Q Consensus 29 ~~~~~EfigT~~l~~~~~~~~~--~~~----~~g~----~~~g~~l~~~~~~~~~~~sGah~NPavTla~~l~g~~~~~~ 98 (249)
|++++||+||++|+........ ... ..++ +++|+.+++++.++ .++||||+|||||+++++.|++++.+
T Consensus 53 r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~-g~ISGAHlNPAVTlal~l~G~~~~~~ 131 (340)
T 3iyz_A 53 KAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCF-GHISGGHINPAVTVAMVCTRKISIAK 131 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEe-eccCcCeeChHHHHHHHHcCCCCHHH
Confidence 8899999999998543221111 111 1122 24566655544333 46899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHhhhc-CC---c
Q psy6903 99 ALFKIGAELLGGYIIIKYIQLLWSLEIAHVHVGQANTVYNCQADLQVPVLLGMLVEGVATFLCRFMSRVFAEK-VP---K 174 (249)
Q Consensus 99 ~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~s~~~~~~~E~~~Tf~l~~~v~~~~~~-~~---~ 174 (249)
++.|+++|++||++|+.+++.+++.+... . ...+.++.+.+..++++.|+++||+|+++++.+.+. ++ .
T Consensus 132 ~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~----~---lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~~d~~~~~~~~ 204 (340)
T 3iyz_A 132 SVFYITAQCLGAIIGAGILYLVTPPSVVG----G---LGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTG 204 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchhhcC----c---eeeccCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCccCCccc
Confidence 99999999999999999999988643211 1 122335567789999999999999999999987653 22 2
Q ss_pred hhhhHHHHHHHHHHHhhhccccccccchhhhhhhhccCCcccccceeehhhhhHHHHHHHHHHHHhhh
Q psy6903 175 LSMILDATFGTLLVVAAFSYSGGYFNPALAGSLKYGCTGHTVTEHLVVYWLSPTIGSLLSVFAFNRMQ 242 (249)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~~~~~~~~~~wVYwvgP~~Ga~la~~~~~~~~ 242 (249)
..++.+++.+...+..++++||++|||||||||++..+ .|+++||||+||++|+++|+++|+++.
T Consensus 205 ~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~---~w~~~WVywvgPiiGailaallY~~l~ 269 (340)
T 3iyz_A 205 SVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGALYEYVF 269 (340)
T ss_pred chhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHcc---CCCcEeehhHHHHHHHHHHHHHHHHHh
Confidence 34667787776666778899999999999999999853 589999999999999999999999875
No 5
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=1e-43 Score=312.80 Aligned_cols=214 Identities=13% Similarity=0.095 Sum_probs=163.0
Q ss_pred HHHHHHHHHHHHHHHh----hHHHHHhhhcchh----HHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHhccCchHHHH
Q psy6903 29 QDLLLEVVATAELCAS----CYELIIVADNWGV----YAYGVALYILTIWWSLNWDDASACPYTHLEDVAERRSNLLIAL 100 (249)
Q Consensus 29 ~~~~~EfigT~~l~~~----~~~~~~~~~~~g~----~~~g~~l~~~~~~~~~~~sGah~NPavTla~~l~g~~~~~~~~ 100 (249)
|++++||+||++|+.. +.+........+. .++|+.+++.++.. .++||||+|||||+++++.|++++++.+
T Consensus 9 ~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~-g~iSGaHlNPAVTla~~~~g~~~~~~~~ 87 (281)
T 1ldf_A 9 GQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLT-AGVSGAHLNPAVTIALWLFACFDKRKVI 87 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHH-HHHHCCCCSHHHHHHHHHHSCCCTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhhee-cccCcCeeChHHHHHHHHcCCCCHHHHH
Confidence 6899999999998542 2222211112233 24566666555444 4689999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhc----------ccccccc-CCCCcchHHHHHHHHHHHHHHHHHHHHhh
Q psy6903 101 FKIGAELLGGYIIIKYIQLLWSLEIAHVHVGQA----------NTVYNCQ-ADLQVPVLLGMLVEGVATFLCRFMSRVFA 169 (249)
Q Consensus 101 ~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~----------~~~~~c~-~~~~~s~~~~~~~E~~~Tf~l~~~v~~~~ 169 (249)
.|+++|++||++|+.+++.+++.++.+.+.+.. .....|+ +..+.+..++++.|+++||+|+++++.+.
T Consensus 88 ~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf~Lv~~il~~~ 167 (281)
T 1ldf_A 88 PFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALT 167 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999865544322110 0012344 33467899999999999999999999886
Q ss_pred hc-CC----chhhhHHHHHHHHHHHhhhccccccccchhhhhhhhcc----CCcc------cccceeehhhhhHHHHHHH
Q psy6903 170 EK-VP----KLSMILDATFGTLLVVAAFSYSGGYFNPALAGSLKYGC----TGHT------VTEHLVVYWLSPTIGSLLS 234 (249)
Q Consensus 170 ~~-~~----~~~~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~----~~~~------~~~~~wVYwvgP~~Ga~la 234 (249)
++ ++ ...++.+++.+..+++..++.||++|||||||||++.+ .+.. +|.|+||||+||++|++++
T Consensus 168 d~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WVy~vgPi~Ga~la 247 (281)
T 1ldf_A 168 DDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVG 247 (281)
T ss_dssp CTTSSSCCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHHHHHHHHHHHHH
T ss_pred ccCCCCcccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCceeeHHhHHHHHHHHHH
Confidence 53 22 24577888888888889999999999999999998765 1211 2238999999999999999
Q ss_pred HHHHHhhhc
Q psy6903 235 VFAFNRMQA 243 (249)
Q Consensus 235 ~~~~~~~~~ 243 (249)
+++|+++.+
T Consensus 248 ~~~y~~l~~ 256 (281)
T 1ldf_A 248 AFAYRKLIG 256 (281)
T ss_dssp HHHHHHHTG
T ss_pred HHHHHHHhC
Confidence 999999854
No 6
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-43 Score=302.72 Aligned_cols=203 Identities=17% Similarity=0.164 Sum_probs=157.2
Q ss_pred HHHHHHHHHHHHHHHhhHHHHH--hhh----cchh----HHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHhccCchHH
Q psy6903 29 QDLLLEVVATAELCASCYELII--VAD----NWGV----YAYGVALYILTIWWSLNWDDASACPYTHLEDVAERRSNLLI 98 (249)
Q Consensus 29 ~~~~~EfigT~~l~~~~~~~~~--~~~----~~g~----~~~g~~l~~~~~~~~~~~sGah~NPavTla~~l~g~~~~~~ 98 (249)
|++++||+||++|+........ ..+ ..+. .++|+.++.++... .++||||+|||||+++++.|++++++
T Consensus 5 r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~-g~iSGaHlNPAVTla~~~~g~~~~~~ 83 (223)
T 3gd8_A 5 KAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCF-GHISGGHINPAVTVAMVCTRKISIAK 83 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHH-HHHHCCCCSHHHHHHHHHTTSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHhee-cccccceEcHHHHHHHHHcCCCCHHH
Confidence 7899999999998542211111 111 1122 24566666554444 46899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHhhhc-CCc---
Q psy6903 99 ALFKIGAELLGGYIIIKYIQLLWSLEIAHVHVGQANTVYNCQADLQVPVLLGMLVEGVATFLCRFMSRVFAEK-VPK--- 174 (249)
Q Consensus 99 ~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~s~~~~~~~E~~~Tf~l~~~v~~~~~~-~~~--- 174 (249)
.+.|+++|++||++|+.+++.+++.+... .. .. +.+.++.+..++++.|+++||+|+++++.+.++ ++.
T Consensus 84 ~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~----~l--g~-~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~ 156 (223)
T 3gd8_A 84 SVFYIAAQCLGAIIGAGILYLVTPPSVVG----GL--GV-TMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTG 156 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCHHHHT----TT--TC-CCCCTTSCHHHHHHHHHHHHHHHHHHHHHHTCTTCSCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccc----ce--ee-ccCCCccCHHHHHHHHHHHHHHHHHHHHHHhccccCCccC
Confidence 99999999999999999999988754321 11 11 224456789999999999999999999987653 222
Q ss_pred hhhhHHHHHHHHHHHhhhccccccccchhhhhhhhccCCcccccceeehhhhhHHHHHHHHHHHHhhh
Q psy6903 175 LSMILDATFGTLLVVAAFSYSGGYFNPALAGSLKYGCTGHTVTEHLVVYWLSPTIGSLLSVFAFNRMQ 242 (249)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~~~~~~~~~~wVYwvgP~~Ga~la~~~~~~~~ 242 (249)
..++.+++.+...+..++++||++|||||||||++..+ +|+++||||+||++|+++++++||++.
T Consensus 157 ~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~---~w~~~Wvy~vgP~~Ga~la~~~y~~~~ 221 (223)
T 3gd8_A 157 SIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGGLYEYVF 221 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT---CCTTTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred CccHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhc---CCCcEEeehhHHHHHHHHHHHHHHHHc
Confidence 34667777776666778899999999999999999853 689999999999999999999999875
No 7
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.1e-43 Score=306.98 Aligned_cols=205 Identities=16% Similarity=0.110 Sum_probs=160.4
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHhhh--cchh----HHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHhccCchHHHHHH
Q psy6903 29 QDLLLEVVATAELCASCYELIIVAD--NWGV----YAYGVALYILTIWWSLNWDDASACPYTHLEDVAERRSNLLIALFK 102 (249)
Q Consensus 29 ~~~~~EfigT~~l~~~~~~~~~~~~--~~g~----~~~g~~l~~~~~~~~~~~sGah~NPavTla~~l~g~~~~~~~~~y 102 (249)
|++++||+||++|+........... ..+. .++|+.+++.+... .++||||+|||||+++++.|++++.+.+.|
T Consensus 13 r~~laEfiGT~~lv~~g~g~~~~~~~~~~~~l~ial~~Glav~~~i~~~-g~iSGaHlNPAVTla~~~~g~~~~~~~~~Y 91 (266)
T 3d9s_A 13 KAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQAL-GPVSGGHINPAITLALLVGNQISLLRAFFY 91 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHHHHHHHH-HHHHCCCCCHHHHHHHHHTSSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCccHHHHHHHHHHHHHHHHHHH-cccCcceECHHHHHHHHHhcCCCHHHHHHH
Confidence 7899999999998654332221111 1222 25566666554444 468999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHhhhc-CC---chhhh
Q psy6903 103 IGAELLGGYIIIKYIQLLWSLEIAHVHVGQANTVYNCQADLQVPVLLGMLVEGVATFLCRFMSRVFAEK-VP---KLSMI 178 (249)
Q Consensus 103 i~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~s~~~~~~~E~~~Tf~l~~~v~~~~~~-~~---~~~~~ 178 (249)
+++|++||++|+.+++.+++.+... . .....+..+.+..++++.|+++||+|+++++.+.++ ++ ...++
T Consensus 92 i~AQ~lGA~~ga~l~~~~~~~~~~~----~---~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~~~~~pl 164 (266)
T 3d9s_A 92 VAAQLVGAIAGAGILYGVAPLNARG----N---LAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPAL 164 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHSCHHHHT----T---TTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCTTCCSCCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHccccccC----c---eeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCccchHHH
Confidence 9999999999999999998754211 0 011123356789999999999999999999988653 22 24567
Q ss_pred HHHHHHHHHHHhhhccccccccchhhhhhhhccCCcccccc-eeehhhhhHHHHHHHHHHHHhhhcc
Q psy6903 179 LDATFGTLLVVAAFSYSGGYFNPALAGSLKYGCTGHTVTEH-LVVYWLSPTIGSLLSVFAFNRMQAS 244 (249)
Q Consensus 179 ~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~~~~~~~~~-~wVYwvgP~~Ga~la~~~~~~~~~~ 244 (249)
.+++.+...+..++++||++|||||||||++..+ .|++ +||||+||++|+++++++|+++..+
T Consensus 165 ~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~---~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~ 228 (266)
T 3d9s_A 165 SIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN---RFSPAHWVFWVGPIVGAVLAAILYFYLLFP 228 (266)
T ss_dssp HHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHT---CCCTTHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHhhccccccccHHHHHHHHHHcC---CcccCEeeeehHHHHHHHHHHHHHHHHhCC
Confidence 7888887777889999999999999999999853 5777 9999999999999999999998543
No 8
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=6.9e-43 Score=304.63 Aligned_cols=204 Identities=19% Similarity=0.117 Sum_probs=161.4
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHh-hh-cchh----HHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHhccCchHHHHHH
Q psy6903 29 QDLLLEVVATAELCASCYELIIV-AD-NWGV----YAYGVALYILTIWWSLNWDDASACPYTHLEDVAERRSNLLIALFK 102 (249)
Q Consensus 29 ~~~~~EfigT~~l~~~~~~~~~~-~~-~~g~----~~~g~~l~~~~~~~~~~~sGah~NPavTla~~l~g~~~~~~~~~y 102 (249)
|++++||+||++|+.+....... .+ ..+. .++|+.++..+.. ..++||||+|||||++.++.|++++.+.+.|
T Consensus 11 ~~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~l~i~l~~Gl~v~~~i~~-~g~iSGahlNPAVTla~~~~g~~~~~~~~~Y 89 (263)
T 2b6o_A 11 RAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQA-VGHISGAHVNPAVTFAFLVGSQMSLLRAICY 89 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCCCSSSCHHHHHHHHHHHHHHHHHHH-GGGTTCCCCSHHHHHHHHHTTCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHH-hhccCcCeeChHHHHHHHHhcCCCHHHHHHH
Confidence 78999999999997655443322 11 1232 2456665554433 4578999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcC-C---chhhh
Q psy6903 103 IGAELLGGYIIIKYIQLLWSLEIAHVHVGQANTVYNCQADLQVPVLLGMLVEGVATFLCRFMSRVFAEKV-P---KLSMI 178 (249)
Q Consensus 103 i~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~s~~~~~~~E~~~Tf~l~~~v~~~~~~~-~---~~~~~ 178 (249)
+++|++||++|+.+++.+++.+... .. ...+ +.++.+..++++.|+++||+|+++++.+.+++ + ...++
T Consensus 90 i~AQ~lGa~~ga~l~~~~~~~~~~~----~~--~~~~-~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~~~~~pl 162 (263)
T 2b6o_A 90 VVAQLLGAVAGAAVLYSVTPPAVRG----NL--ALNT-LHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVAL 162 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTTCS----SC--SCCC-CCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTSCSSCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHccccccc----cc--cccc-CCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccHHH
Confidence 9999999999999999998653211 01 1112 33467899999999999999999999886532 1 24567
Q ss_pred HHHHHHHHHHHhhhccccccccchhhhhhhhccCCcccccceeehhhhhHHHHHHHHHHHHhhhc
Q psy6903 179 LDATFGTLLVVAAFSYSGGYFNPALAGSLKYGCTGHTVTEHLVVYWLSPTIGSLLSVFAFNRMQA 243 (249)
Q Consensus 179 ~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~~~~~~~~~~wVYwvgP~~Ga~la~~~~~~~~~ 243 (249)
.+++.+...+..++++||++|||||||||++..+ .|+|+||||+||++|+++++++|+++..
T Consensus 163 ~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~---~~~~~Wvy~vgP~~Ga~la~~~y~~l~~ 224 (263)
T 2b6o_A 163 AVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTR---NFTNHWVYWVGPVIGAGLGSLLYDFLLF 224 (263)
T ss_dssp HHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHT---CCTTCTHHHHHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHhccCCCcccccHHHHHHHHHHcC---CccceeHHHHHHHHHHHHHHHHHHHHhC
Confidence 7888888888899999999999999999999743 6899999999999999999999999744
No 9
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=2.5e-43 Score=311.59 Aligned_cols=204 Identities=17% Similarity=0.178 Sum_probs=160.1
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHhh--h----cchh----HHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHhccCchHH
Q psy6903 29 QDLLLEVVATAELCASCYELIIVA--D----NWGV----YAYGVALYILTIWWSLNWDDASACPYTHLEDVAERRSNLLI 98 (249)
Q Consensus 29 ~~~~~EfigT~~l~~~~~~~~~~~--~----~~g~----~~~g~~l~~~~~~~~~~~sGah~NPavTla~~l~g~~~~~~ 98 (249)
|++++||+||++|+.......... . ..+. .++|+.+++++... .++||||+|||||+++++.|++++.+
T Consensus 14 r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~-g~iSGaHlNPAVTla~~~~g~~~~~~ 92 (301)
T 2zz9_A 14 KAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCF-GHISGGHINPAVTVAMVCTRKISIAK 92 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHH-GGGTCCCCSHHHHHHHHHTSSSCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhhee-ccCCcceeChHHHHHHHHhcCCCHHH
Confidence 789999999999865433221110 0 1122 25566666554444 46899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHhhhc-CCc---
Q psy6903 99 ALFKIGAELLGGYIIIKYIQLLWSLEIAHVHVGQANTVYNCQADLQVPVLLGMLVEGVATFLCRFMSRVFAEK-VPK--- 174 (249)
Q Consensus 99 ~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~s~~~~~~~E~~~Tf~l~~~v~~~~~~-~~~--- 174 (249)
.+.|+++|++||++|+.+++.+++.+... + ...+.++...+..++++.|+++||+|+++++.+.++ +++
T Consensus 93 ~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~---~----~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~~d~~~~~~~~ 165 (301)
T 2zz9_A 93 SVFYITAQCLGAIIGAGILYLVTPPSVVG---G----LGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTG 165 (301)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTSCSCGGG---T----SSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHSCSSSSCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccC---c----eeeecCCcccchHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc
Confidence 99999999999999999999988643211 1 122345567889999999999999999999987543 222
Q ss_pred hhhhHHHHHHHHHHHhhhccccccccchhhhhhhhccCCcccccceeehhhhhHHHHHHHHHHHHhhhc
Q psy6903 175 LSMILDATFGTLLVVAAFSYSGGYFNPALAGSLKYGCTGHTVTEHLVVYWLSPTIGSLLSVFAFNRMQA 243 (249)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~~~~~~~~~~wVYwvgP~~Ga~la~~~~~~~~~ 243 (249)
..++.+++.+...+..++++||++|||||+|||++.++ .|+++||||+||++|+++++++|+++..
T Consensus 166 ~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~---~w~~~WVy~vgPiiGailaa~ly~~l~~ 231 (301)
T 2zz9_A 166 SVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGALYEYVFC 231 (301)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC---CCTTTTHHHHHHHHHHHHHHHHHHTTTC
T ss_pred hHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhC---CCcceeeeeeHHHHHHHHHHHHHHHHhC
Confidence 35677888776667778899999999999999999863 5899999999999999999999999853
No 10
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=3.1e-42 Score=302.44 Aligned_cols=202 Identities=14% Similarity=0.157 Sum_probs=158.3
Q ss_pred HHHHHHHHHHHHHHHhhHHHH-Hhhh----------cchh----HHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHhcc
Q psy6903 29 QDLLLEVVATAELCASCYELI-IVAD----------NWGV----YAYGVALYILTIWWSLNWDDASACPYTHLEDVAERR 93 (249)
Q Consensus 29 ~~~~~EfigT~~l~~~~~~~~-~~~~----------~~g~----~~~g~~l~~~~~~~~~~~sGah~NPavTla~~l~g~ 93 (249)
|++++||+||++|+....... .... ..++ .++|+.+++++... .++||||+|||||+++++.|+
T Consensus 46 r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~-g~iSGaHlNPAVTla~~~~g~ 124 (279)
T 2w2e_A 46 IAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFIT-YRVSGGNLNPAVTLALVLARA 124 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHH-TTTTCCCCSHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHH-hhcCccccChHHHHHHHHcCC
Confidence 778999999999854221111 1100 1122 24566666554443 468999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcC-
Q psy6903 94 SNLLIALFKIGAELLGGYIIIKYIQLLWSLEIAHVHVGQANTVYNCQADLQVPVLLGMLVEGVATFLCRFMSRVFAEKV- 172 (249)
Q Consensus 94 ~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~s~~~~~~~E~~~Tf~l~~~v~~~~~~~- 172 (249)
+++++.+.|+++|++||++|+.+++.+++.+.. ....+..+.+..++++.|+++||+|+++++.+.+++
T Consensus 125 ~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~----------~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~ 194 (279)
T 2w2e_A 125 IPPFRGILMAFTQIVAGMAAAGAASAMTPGEIA----------FANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKH 194 (279)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCC----------CSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHccccce----------eeccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 999999999999999999999999998864320 011233467899999999999999999999875432
Q ss_pred --CchhhhHHHHHHHHHHHhhhccccccccchhhhhhhhccCCcccccceeehhhhhHHHHHHHHHHHHhhhc
Q psy6903 173 --PKLSMILDATFGTLLVVAAFSYSGGYFNPALAGSLKYGCTGHTVTEHLVVYWLSPTIGSLLSVFAFNRMQA 243 (249)
Q Consensus 173 --~~~~~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~~~~~~~~~~wVYwvgP~~Ga~la~~~~~~~~~ 243 (249)
+...++.+++.+..+++.+++.||++|||||||||++... ..++|+||||+||++|+++++++|+++..
T Consensus 195 ~~~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~--~~~~~~WVy~vgPiiGa~la~~ly~~l~~ 265 (279)
T 2w2e_A 195 RATWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAAR--SFPNYHWIYWLGPILGAFLAYSIWQMWKW 265 (279)
T ss_dssp TTGGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHT--CCCTTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhc--cchhhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 2246778888888888899999999999999999999864 34578999999999999999999999854
No 11
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=9.9e-43 Score=303.10 Aligned_cols=212 Identities=12% Similarity=0.051 Sum_probs=158.5
Q ss_pred HHHHHHHHHHHHHHHhhHH---HHHhhh-cchh----HHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHhccCchHHHH
Q psy6903 29 QDLLLEVVATAELCASCYE---LIIVAD-NWGV----YAYGVALYILTIWWSLNWDDASACPYTHLEDVAERRSNLLIAL 100 (249)
Q Consensus 29 ~~~~~EfigT~~l~~~~~~---~~~~~~-~~g~----~~~g~~l~~~~~~~~~~~sGah~NPavTla~~l~g~~~~~~~~ 100 (249)
|++++||+||++|+..... .....+ ..+. .++|+.++..+... .++||||+|||||+++++.|++++++.+
T Consensus 11 ~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~-g~iSGaHlNPAVTla~~~~g~~~~~~~~ 89 (258)
T 3c02_A 11 REFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVS-AKLSGAHLNLAVSIGLSSINKFDLKKIP 89 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHH-HHHHCCCCSHHHHHHHHHTTSSCGGGHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHhee-cccCcCeeChHHHHHHHHhCCCcHHHHH
Confidence 7899999999998542211 111111 1122 24566666555444 4689999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcC-----Cch
Q psy6903 101 FKIGAELLGGYIIIKYIQLLWSLEIAHVHVGQANTVYNCQADLQVPVLLGMLVEGVATFLCRFMSRVFAEKV-----PKL 175 (249)
Q Consensus 101 ~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~s~~~~~~~E~~~Tf~l~~~v~~~~~~~-----~~~ 175 (249)
.|+++|++||++|+.+++.+++.++.+........... ...+.+..++++.|+++||+|+++++.+.+++ +..
T Consensus 90 ~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~--~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~d~~~~~~~~~~ 167 (258)
T 3c02_A 90 VYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETS--RNPSISLTGAFFNELILTGILLLVILVVVDENICGKFHIL 167 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCC--CCTTSCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCSCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccc--cCCCCchHHHHHHHHHHHHHHHHHHHHHhCcccCCccccc
Confidence 99999999999999999999986554322111000011 11234566799999999999999999876432 124
Q ss_pred h-hhHHHHHHHHHHHhhhccccccccchhhhhhhhccC---Ccccc----cceeehhhhhHHHHHHHHHHHHhhhc
Q psy6903 176 S-MILDATFGTLLVVAAFSYSGGYFNPALAGSLKYGCT---GHTVT----EHLVVYWLSPTIGSLLSVFAFNRMQA 243 (249)
Q Consensus 176 ~-~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~~---~~~~~----~~~wVYwvgP~~Ga~la~~~~~~~~~ 243 (249)
. ++.+++.+..+++..++.||++|||||||||++... +...| +|+||||+||++|+++++++||++.+
T Consensus 168 ~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~~~~ 243 (258)
T 3c02_A 168 KLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKVIC 243 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHHHHHHHhc
Confidence 5 777888888888899999999999999999998752 22233 67999999999999999999999754
No 12
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=6.7e-42 Score=296.11 Aligned_cols=209 Identities=18% Similarity=0.132 Sum_probs=161.1
Q ss_pred HHHHHHHHHHHHHHHhh----HHHHHhhh----------------cchh-----HHHHHHHHHHHHHHhhccCCCCCCcH
Q psy6903 29 QDLLLEVVATAELCASC----YELIIVAD----------------NWGV-----YAYGVALYILTIWWSLNWDDASACPY 83 (249)
Q Consensus 29 ~~~~~EfigT~~l~~~~----~~~~~~~~----------------~~g~-----~~~g~~l~~~~~~~~~~~sGah~NPa 83 (249)
|++++||+||++|+... .......+ +.+. .++|+.++..+... .++||||+|||
T Consensus 6 ~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~-g~iSGaH~NPA 84 (246)
T 2f2b_A 6 KRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYAL-GNISGCHINPA 84 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHH-TTTTCCCCSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhhee-cccccceeCHH
Confidence 67999999999985322 22111110 1111 24566655554443 46899999999
Q ss_pred HHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccccccccCC-CCcchHHHHHHHHHHHHHHH
Q psy6903 84 THLEDVAERRSNLLIALFKIGAELLGGYIIIKYIQLLWSLEIAHVHVGQANTVYNCQAD-LQVPVLLGMLVEGVATFLCR 162 (249)
Q Consensus 84 vTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~c~~~-~~~s~~~~~~~E~~~Tf~l~ 162 (249)
||+++++.|++++++.+.|+++|++||++|+.+++.+++.+....+ ...|+.+ .+.+..++++.|+++||+|+
T Consensus 85 VTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~------~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv 158 (246)
T 2f2b_A 85 VTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVG------GLGATAPFPGISYWQAMLAEVVGTFLLM 158 (246)
T ss_dssp HHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTT------GGGCCCCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcc------eeeeccCccccchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999976321111 1233333 57889999999999999999
Q ss_pred HHHHHhhh-cC-C-chhhhHHHHHHHHHHHhhhccccccccchhhhhhhh--cc-CCcccccceeehhhhhHHHHHHHHH
Q psy6903 163 FMSRVFAE-KV-P-KLSMILDATFGTLLVVAAFSYSGGYFNPALAGSLKY--GC-TGHTVTEHLVVYWLSPTIGSLLSVF 236 (249)
Q Consensus 163 ~~v~~~~~-~~-~-~~~~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~--~~-~~~~~~~~~wVYwvgP~~Ga~la~~ 236 (249)
++++.+.+ ++ + ...++.+++.+..+++..++.||++||||||+||++ .. ++++.|+|.|+||++|++|++++++
T Consensus 159 ~~i~~~~~~~~~~~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa~ 238 (246)
T 2f2b_A 159 ITIMGIAVDERAPKGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAAL 238 (246)
T ss_dssp HHHHHHTTSTTSCTTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHHH
T ss_pred heeeEEecCCCCCCceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHHHH
Confidence 99988643 22 1 235677888888888999999999999999999998 33 3467889999999999999999999
Q ss_pred HHHhhhcc
Q psy6903 237 AFNRMQAS 244 (249)
Q Consensus 237 ~~~~~~~~ 244 (249)
+||.+.+|
T Consensus 239 ~y~~l~~~ 246 (246)
T 2f2b_A 239 TYQYLTSE 246 (246)
T ss_dssp HHHHHTC-
T ss_pred HHHHHcCC
Confidence 99998753
No 13
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=1.9e-42 Score=303.07 Aligned_cols=204 Identities=16% Similarity=0.113 Sum_probs=156.0
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHh-------hhc----chh----HHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHhcc
Q psy6903 29 QDLLLEVVATAELCASCYELIIV-------ADN----WGV----YAYGVALYILTIWWSLNWDDASACPYTHLEDVAERR 93 (249)
Q Consensus 29 ~~~~~EfigT~~l~~~~~~~~~~-------~~~----~g~----~~~g~~l~~~~~~~~~~~sGah~NPavTla~~l~g~ 93 (249)
|++++||+||++|+......... .+. .+. +++|+.+++++... .++||||+|||||+++++.|+
T Consensus 12 r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~-g~iSGaHlNPAVTla~~~~g~ 90 (271)
T 1j4n_A 12 RAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSV-GHISGAHLNPAVTLGLLLSCQ 90 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHHHCCCCCHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHH-hcCCcceEcHHHHHHHHHcCC
Confidence 78999999999985432211110 001 112 25566665554443 468999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHhhhc-C
Q psy6903 94 SNLLIALFKIGAELLGGYIIIKYIQLLWSLEIAHVHVGQANTVYNCQADLQVPVLLGMLVEGVATFLCRFMSRVFAEK-V 172 (249)
Q Consensus 94 ~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~s~~~~~~~E~~~Tf~l~~~v~~~~~~-~ 172 (249)
+++++.+.|+++|++||++|+.+++.+++.... ... ...| ..++.+..++++.|+++||+|+++++.+.++ +
T Consensus 91 ~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~----~~~--g~~~-~~~~~~~~~~~~~E~i~T~~Lv~~i~~~~d~~~ 163 (271)
T 1j4n_A 91 ISVLRAIMYIIAQCVGAIVATAILSGITSSLPD----NSL--GLNA-LAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRR 163 (271)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTT----CCT--TCCC-CCTTCCTTGGGHHHHHHHHHHHHHHHHHTCSSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHccCCcc----ccc--cccc-CCCccchHHHHHHHHHHHHHHHHHHHhhccccC
Confidence 999999999999999999999999998853211 000 1112 2345677899999999999999999987653 2
Q ss_pred C---chhhhHHHHHHHHHHHhhhccccccccchhhhhhhhccCCcccccceeehhhhhHHHHHHHHHHHHhhhc
Q psy6903 173 P---KLSMILDATFGTLLVVAAFSYSGGYFNPALAGSLKYGCTGHTVTEHLVVYWLSPTIGSLLSVFAFNRMQA 243 (249)
Q Consensus 173 ~---~~~~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~~~~~~~~~~wVYwvgP~~Ga~la~~~~~~~~~ 243 (249)
. ...++.+++.+...+..++++||++|||||||||++.. +.|+++||||+||++|+++++++|+++..
T Consensus 164 ~~~~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~---~~~~~~wv~~vgP~~Ga~la~~~y~~~~~ 234 (271)
T 1j4n_A 164 RDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVIT---HNFQDHWIFWVGPFIGAALAVLIYDFILA 234 (271)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHT---TCCTTTTHHHHHHHHHHHHHHHHHHTTTS
T ss_pred CCccccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHh---CCCcceeHHHHHHHHHHHHHHHHHHHHhC
Confidence 2 24567788877766677789999999999999999875 35889999999999999999999999744
No 14
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.08 E-value=3.6e-10 Score=98.04 Aligned_cols=99 Identities=16% Similarity=0.142 Sum_probs=77.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhhc--CCchh----hhHHHHHHHHHHHhhhccccccccchhhhhhhhccCCccccc
Q psy6903 145 VPVLLGMLVEGVATFLCRFMSRVFAEK--VPKLS----MILDATFGTLLVVAAFSYSGGYFNPALAGSLKYGCTGHTVTE 218 (249)
Q Consensus 145 ~s~~~~~~~E~~~Tf~l~~~v~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~~~~~~~~ 218 (249)
.+..+.++.|+++||+|++........ +...+ .+.-++.+...++..++.||+.+|||+++++.+. +...|.
T Consensus 7 ~~~~~~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~--g~~~~~ 84 (263)
T 2b6o_A 7 ASFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVG--SQMSLL 84 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCCCSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHT--TCSCHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHh--cCCCHH
Confidence 356789999999999999988765422 11112 2334555666678889999999999999998875 335688
Q ss_pred ceeehhhhhHHHHHHHHHHHHhhhccc
Q psy6903 219 HLVVYWLSPTIGSLLSVFAFNRMQASK 245 (249)
Q Consensus 219 ~~wVYwvgP~~Ga~la~~~~~~~~~~~ 245 (249)
..|+||++|++|+++++.+.+.+.+++
T Consensus 85 ~~~~Yi~AQ~lGa~~ga~l~~~~~~~~ 111 (263)
T 2b6o_A 85 RAICYVVAQLLGAVAGAAVLYSVTPPA 111 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 899999999999999999999887753
No 15
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.01 E-value=1.3e-09 Score=93.60 Aligned_cols=92 Identities=15% Similarity=0.065 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHhhh---cchhHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHH-----hccCchHHHH
Q psy6903 29 QDLLLEVVATAELCASCYELIIVAD---NWGVYAYGVALYILTIWWSLNWDDASACPYTHLEDVA-----ERRSNLLIAL 100 (249)
Q Consensus 29 ~~~~~EfigT~~l~~~~~~~~~~~~---~~g~~~~g~~l~~~~~~~~~~~sGah~NPavTla~~l-----~g~~~~~~~~ 100 (249)
+.++.|+++|++|+.++.......+ ...+..+|+.++.+.... ...||+|+|||.+++-.+ .++..|....
T Consensus 145 ~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~~pl~iGl~v~~~~~~~-g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~ 223 (246)
T 2f2b_A 145 QAMLAEVVGTFLLMITIMGIAVDERAPKGFAGIIIGLTVAGIITTL-GNISGSSLNPARTFGPYLNDMIFAGTDLWNYYS 223 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSTTSCTTCHHHHHHHHHHHHHHHH-HHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTT
T ss_pred HHHHHHHHHHHHHHheeeEEecCCCCCCceeeHHHHHHHHHHHhcc-cccCCCccCHHHHHHHHHHHHHcCCCCCcceEE
Confidence 7889999999999877654322111 122345566555544443 457999999999999877 4567788889
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy6903 101 FKIGAELLGGYIIIKYIQLLW 121 (249)
Q Consensus 101 ~yi~aQ~~Ga~~g~~~~~~~~ 121 (249)
+|+++|++|+++|+.+.+.+.
T Consensus 224 vy~vap~~Ga~laa~~y~~l~ 244 (246)
T 2f2b_A 224 IYVIGPIVGAVLAALTYQYLT 244 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred EeeeHHHHHHHHHHHHHHHHc
Confidence 999999999999998877654
No 16
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=98.75 E-value=2.4e-08 Score=86.06 Aligned_cols=98 Identities=22% Similarity=0.228 Sum_probs=72.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhh---hcCC--chh----hhHHHHHHHHHHHhhhccccccccchhhhhhhhccCCcc
Q psy6903 145 VPVLLGMLVEGVATFLCRFMSRVFA---EKVP--KLS----MILDATFGTLLVVAAFSYSGGYFNPALAGSLKYGCTGHT 215 (249)
Q Consensus 145 ~s~~~~~~~E~~~Tf~l~~~v~~~~---~~~~--~~~----~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~~~~~ 215 (249)
.+..+.++.|+++||+|++...... ...+ ..+ .+.-++.+...++..++.||+-+|||.+++..+. +.-
T Consensus 27 ~~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~--g~~ 104 (256)
T 3llq_A 27 YVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVA--GRF 104 (256)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHT--TSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHh--cCC
Confidence 4578999999999999998765432 1111 112 1233556666677889999999999999998775 335
Q ss_pred cccceeehhhhhHHHHHHHHHHHHhhhcc
Q psy6903 216 VTEHLVVYWLSPTIGSLLSVFAFNRMQAS 244 (249)
Q Consensus 216 ~~~~~wVYwvgP~~Ga~la~~~~~~~~~~ 244 (249)
.|.....||+++++|+++++.+.+.+.++
T Consensus 105 ~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~ 133 (256)
T 3llq_A 105 PASSLVPYVIAQVAGAIVAAAALYVIATG 133 (256)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 68889999999999999999987776543
No 17
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=98.73 E-value=2.1e-08 Score=87.00 Aligned_cols=98 Identities=21% Similarity=0.156 Sum_probs=75.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhhcCC--chh----hhHHHHHHHHHHHhhhccccccccchhhhhhhhccCCccccc
Q psy6903 145 VPVLLGMLVEGVATFLCRFMSRVFAEKVP--KLS----MILDATFGTLLVVAAFSYSGGYFNPALAGSLKYGCTGHTVTE 218 (249)
Q Consensus 145 ~s~~~~~~~E~~~Tf~l~~~v~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~~~~~~~~ 218 (249)
.+..+.++.|+++||+|++.......+.+ ... .+.-++.+...++..++.||+-+|||.+++..... .-.|.
T Consensus 9 ~~~~r~~laEfiGT~~lv~~g~g~~~~~~~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g--~~~~~ 86 (266)
T 3d9s_A 9 VAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGN--QISLL 86 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTS--SSCHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhc--CCCHH
Confidence 35778999999999999988765432211 111 23345556666778899999999999999987753 34678
Q ss_pred ceeehhhhhHHHHHHHHHHHHhhhcc
Q psy6903 219 HLVVYWLSPTIGSLLSVFAFNRMQAS 244 (249)
Q Consensus 219 ~~wVYwvgP~~Ga~la~~~~~~~~~~ 244 (249)
..+.||+++++|+++++.+.+.+.++
T Consensus 87 ~~~~Yi~AQ~lGA~~ga~l~~~~~~~ 112 (266)
T 3d9s_A 87 RAFFYVAAQLVGAIAGAGILYGVAPL 112 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 89999999999999999988887765
No 18
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=98.58 E-value=1.5e-07 Score=80.24 Aligned_cols=96 Identities=19% Similarity=0.196 Sum_probs=71.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhh--c-C--Cchh----hhHHHHHHHHHHHhhhccccccccchhhhhhhhccCCcccc
Q psy6903 147 VLLGMLVEGVATFLCRFMSRVFAE--K-V--PKLS----MILDATFGTLLVVAAFSYSGGYFNPALAGSLKYGCTGHTVT 217 (249)
Q Consensus 147 ~~~~~~~E~~~Tf~l~~~v~~~~~--~-~--~~~~----~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~~~~~~~ 217 (249)
+.+.++.|+++||+|++.-..... + . ...+ .+.-++.+...++..++.||+=+|||.+++..... .-.|
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g--~~~~ 81 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGG--RFPA 81 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTT--SSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhC--CCCH
Confidence 578899999999999987644321 1 1 1112 12335556666778899999999999999987753 3467
Q ss_pred cceeehhhhhHHHHHHHHHHHHhhhcc
Q psy6903 218 EHLVVYWLSPTIGSLLSVFAFNRMQAS 244 (249)
Q Consensus 218 ~~~wVYwvgP~~Ga~la~~~~~~~~~~ 244 (249)
.....||+++++|+++++.+.+.+.++
T Consensus 82 ~~~~~Yi~aQ~lGa~~ga~l~~~~~~~ 108 (234)
T 2o9g_A 82 KEVVGYVIAQVVGGIVAAALLYLIASG 108 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 788999999999999999987776653
No 19
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=98.56 E-value=2.7e-07 Score=81.31 Aligned_cols=99 Identities=13% Similarity=0.072 Sum_probs=74.8
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHhhh---cC---Cchh----hhHHHHHHHHHHHhhhccccccccchhhhhhhhccCC
Q psy6903 144 QVPVLLGMLVEGVATFLCRFMSRVFAE---KV---PKLS----MILDATFGTLLVVAAFSYSGGYFNPALAGSLKYGCTG 213 (249)
Q Consensus 144 ~~s~~~~~~~E~~~Tf~l~~~v~~~~~---~~---~~~~----~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~~~ 213 (249)
..+.++.++.|+++||+|++.-....- .. .... .+.-++.+...++..++.||+=+|||.+++.....
T Consensus 9 ~~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g-- 86 (301)
T 2zz9_A 9 TQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTR-- 86 (301)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTS--
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhc--
Confidence 456889999999999999988754321 11 1111 22334555566778899999999999999987753
Q ss_pred cccccceeehhhhhHHHHHHHHHHHHhhhcc
Q psy6903 214 HTVTEHLVVYWLSPTIGSLLSVFAFNRMQAS 244 (249)
Q Consensus 214 ~~~~~~~wVYwvgP~~Ga~la~~~~~~~~~~ 244 (249)
.-.|.....||+++++|+++++.+.+.+.++
T Consensus 87 ~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~ 117 (301)
T 2zz9_A 87 KISIAKSVFYITAQCLGAIIGAGILYLVTPP 117 (301)
T ss_dssp SSCTTTTHHHHHHHHHHHHHHHHHHHTTSCS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3567888999999999999999988887764
No 20
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=98.53 E-value=2.2e-07 Score=80.25 Aligned_cols=97 Identities=12% Similarity=0.091 Sum_probs=72.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhh---hcCC-chh----hhHHHHHHHHHHHhhhccccccccchhhhhhhhccCCcccc
Q psy6903 146 PVLLGMLVEGVATFLCRFMSRVFA---EKVP-KLS----MILDATFGTLLVVAAFSYSGGYFNPALAGSLKYGCTGHTVT 217 (249)
Q Consensus 146 s~~~~~~~E~~~Tf~l~~~v~~~~---~~~~-~~~----~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~~~~~~~ 217 (249)
+..+.++.|+++||+|++.-.... .+.+ ... .+.-++.+...++..++.||+-+|||.+++..... .-.|
T Consensus 8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g--~~~~ 85 (258)
T 3c02_A 8 SYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSIN--KFDL 85 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTT--SSCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhC--CCcH
Confidence 567899999999999998754321 1111 111 12234555666778889999999999999987753 3467
Q ss_pred cceeehhhhhHHHHHHHHHHHHhhhcc
Q psy6903 218 EHLVVYWLSPTIGSLLSVFAFNRMQAS 244 (249)
Q Consensus 218 ~~~wVYwvgP~~Ga~la~~~~~~~~~~ 244 (249)
.....||+++++|+++++.+-+.+.++
T Consensus 86 ~~~~~Yi~AQ~lGa~~ga~l~~~~~~~ 112 (258)
T 3c02_A 86 KKIPVYFFAQLLGAFVGTSTVYGLYHG 112 (258)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcch
Confidence 889999999999999999987777654
No 21
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=98.47 E-value=3.6e-07 Score=79.90 Aligned_cols=97 Identities=12% Similarity=0.042 Sum_probs=71.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhh----hcCCchhh----hHHHHHHHHHHHhhhccccccccchhhhhhhhccCCcccc
Q psy6903 146 PVLLGMLVEGVATFLCRFMSRVFA----EKVPKLSM----ILDATFGTLLVVAAFSYSGGYFNPALAGSLKYGCTGHTVT 217 (249)
Q Consensus 146 s~~~~~~~E~~~Tf~l~~~v~~~~----~~~~~~~~----~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~~~~~~~ 217 (249)
+..+.++.|+++||+|++.-.... .++.+... +.-++.+...++..++.||+=+|||.+++..... .-.|
T Consensus 6 ~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g--~~~~ 83 (281)
T 1ldf_A 6 TLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFA--CFDK 83 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHS--CCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcC--CCCH
Confidence 567899999999999998654321 12222222 2334555566677899999999999999987753 3467
Q ss_pred cceeehhhhhHHHHHHHHHHHHhhhcc
Q psy6903 218 EHLVVYWLSPTIGSLLSVFAFNRMQAS 244 (249)
Q Consensus 218 ~~~wVYwvgP~~Ga~la~~~~~~~~~~ 244 (249)
.....||+++++|+++++.+-+.+.++
T Consensus 84 ~~~~~Yi~AQ~lGA~~ga~l~~~~~~~ 110 (281)
T 1ldf_A 84 RKVIPFIVSQVAGAFCAAALVYGLYYN 110 (281)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 788999999999999999877666543
No 22
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=98.47 E-value=3.7e-07 Score=77.17 Aligned_cols=98 Identities=14% Similarity=0.105 Sum_probs=72.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhh---cCCc---hh----hhHHHHHHHHHHHhhhccccccccchhhhhhhhccCCcc
Q psy6903 146 PVLLGMLVEGVATFLCRFMSRVFAE---KVPK---LS----MILDATFGTLLVVAAFSYSGGYFNPALAGSLKYGCTGHT 215 (249)
Q Consensus 146 s~~~~~~~E~~~Tf~l~~~v~~~~~---~~~~---~~----~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~~~~~ 215 (249)
+.++.++.|+++||+|++.-..... ++.+ .+ .+.-++.+...++..++.||+-+|||.+++.... +.-
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~--g~~ 79 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCT--RKI 79 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHT--TSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHc--CCC
Confidence 4578899999999999987654321 1111 11 1223455555667788999999999999998765 334
Q ss_pred cccceeehhhhhHHHHHHHHHHHHhhhccc
Q psy6903 216 VTEHLVVYWLSPTIGSLLSVFAFNRMQASK 245 (249)
Q Consensus 216 ~~~~~wVYwvgP~~Ga~la~~~~~~~~~~~ 245 (249)
.|.....|++++++|+++++.+-+.+.+++
T Consensus 80 ~~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~ 109 (223)
T 3gd8_A 80 SIAKSVFYIAAQCLGAIIGAGILYLVTPPS 109 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHSCHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 677888999999999999999877776653
No 23
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=98.43 E-value=5e-07 Score=78.55 Aligned_cols=97 Identities=18% Similarity=0.199 Sum_probs=71.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhh--c-----C-Cc--h-h----hhHHHHHHHHHHHhhhccccccccchhhhhhhhc
Q psy6903 146 PVLLGMLVEGVATFLCRFMSRVFAE--K-----V-PK--L-S----MILDATFGTLLVVAAFSYSGGYFNPALAGSLKYG 210 (249)
Q Consensus 146 s~~~~~~~E~~~Tf~l~~~v~~~~~--~-----~-~~--~-~----~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~ 210 (249)
+..+.++.|+++||+|++.-..... . + .+ . . .+.-++.+...++..++.||+=+|||.+++....
T Consensus 9 ~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~ 88 (271)
T 1j4n_A 9 LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLS 88 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHc
Confidence 5678999999999999987654311 0 1 11 0 1 1233455556667889999999999999998775
Q ss_pred cCCcccccceeehhhhhHHHHHHHHHHHHhhhcc
Q psy6903 211 CTGHTVTEHLVVYWLSPTIGSLLSVFAFNRMQAS 244 (249)
Q Consensus 211 ~~~~~~~~~~wVYwvgP~~Ga~la~~~~~~~~~~ 244 (249)
. .-.|.....||+++++|+++++.+.+.+.++
T Consensus 89 g--~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~ 120 (271)
T 1j4n_A 89 C--QISVLRAIMYIIAQCVGAIVATAILSGITSS 120 (271)
T ss_dssp T--SSCHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred C--CCCHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 3 3467788999999999999999887776543
No 24
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=98.43 E-value=3.6e-07 Score=80.60 Aligned_cols=98 Identities=17% Similarity=0.175 Sum_probs=73.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhh---h-cC---Cchh----hhHHHHHHHHHHHhhhccccccccchhhhhhhhccCC
Q psy6903 145 VPVLLGMLVEGVATFLCRFMSRVFA---E-KV---PKLS----MILDATFGTLLVVAAFSYSGGYFNPALAGSLKYGCTG 213 (249)
Q Consensus 145 ~s~~~~~~~E~~~Tf~l~~~v~~~~---~-~~---~~~~----~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~~~ 213 (249)
.+..+.++.|+++||+|++...... . .. .... .+.-++.+...++..++.||+-+|||.+++..+..
T Consensus 58 ~~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g-- 135 (304)
T 3cn5_A 58 WSFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLAR-- 135 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTT--
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhC--
Confidence 3578899999999999998765331 1 11 1111 12334555666778899999999999999987753
Q ss_pred cccccceeehhhhhHHHHHHHHHHHHhhhcc
Q psy6903 214 HTVTEHLVVYWLSPTIGSLLSVFAFNRMQAS 244 (249)
Q Consensus 214 ~~~~~~~wVYwvgP~~Ga~la~~~~~~~~~~ 244 (249)
.-.|.....||+++++|+++++.+.+.+.++
T Consensus 136 ~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~ 166 (304)
T 3cn5_A 136 KVELLRALVYMIAQCLGAICGVGLVKAFMKG 166 (304)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3457788899999999999999988777654
No 25
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=98.43 E-value=3.4e-07 Score=81.63 Aligned_cols=97 Identities=13% Similarity=0.094 Sum_probs=71.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhh---cCCc---hh----hhHHHHHHHHHHHhhhccccccccchhhhhhhhccCCcc
Q psy6903 146 PVLLGMLVEGVATFLCRFMSRVFAE---KVPK---LS----MILDATFGTLLVVAAFSYSGGYFNPALAGSLKYGCTGHT 215 (249)
Q Consensus 146 s~~~~~~~E~~~Tf~l~~~v~~~~~---~~~~---~~----~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~~~~~ 215 (249)
+.++.++.|+++||+|++.-....- ...+ .. .+.-++.+...++..++.||+-+|||.+++..+. +..
T Consensus 50 ~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~--G~~ 127 (340)
T 3iyz_A 50 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCT--RKI 127 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHc--CCC
Confidence 5678999999999999987654321 1111 11 1223445555566788999999999999998765 334
Q ss_pred cccceeehhhhhHHHHHHHHHHHHhhhcc
Q psy6903 216 VTEHLVVYWLSPTIGSLLSVFAFNRMQAS 244 (249)
Q Consensus 216 ~~~~~wVYwvgP~~Ga~la~~~~~~~~~~ 244 (249)
.|.....||+++++|+++++.+.+.+.++
T Consensus 128 ~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~ 156 (340)
T 3iyz_A 128 SIAKSVFYITAQCLGAIIGAGILYLVTPP 156 (340)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 67788899999999999999987777654
No 26
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=98.40 E-value=6.8e-07 Score=77.98 Aligned_cols=97 Identities=19% Similarity=0.118 Sum_probs=71.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHh---hhcC-----Cc---hh----hhHHHHHHHHHHHhhhccccccccchhhhhhhhc
Q psy6903 146 PVLLGMLVEGVATFLCRFMSRVF---AEKV-----PK---LS----MILDATFGTLLVVAAFSYSGGYFNPALAGSLKYG 210 (249)
Q Consensus 146 s~~~~~~~E~~~Tf~l~~~v~~~---~~~~-----~~---~~----~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~ 210 (249)
+..+.++.|+++||+|++.-... .... .+ .+ .+.-++.+...++..++.||+=+|||.+++....
T Consensus 43 ~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~ 122 (279)
T 2w2e_A 43 NHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVLA 122 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHHc
Confidence 55778999999999999775432 1111 11 11 1223455566677889999999999999998775
Q ss_pred cCCcccccceeehhhhhHHHHHHHHHHHHhhhcc
Q psy6903 211 CTGHTVTEHLVVYWLSPTIGSLLSVFAFNRMQAS 244 (249)
Q Consensus 211 ~~~~~~~~~~wVYwvgP~~Ga~la~~~~~~~~~~ 244 (249)
. .-.|.....||+++++|+++++.+-+.+.++
T Consensus 123 g--~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~ 154 (279)
T 2w2e_A 123 R--AIPPFRGILMAFTQIVAGMAAAGAASAMTPG 154 (279)
T ss_dssp T--SSCHHHHHHHHHHHHHHHHHHHHHHHHHSCS
T ss_pred C--CCCHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 3 3467788899999999999999988877654
No 27
>4fc4_A Nitrite transporter NIRC; alpha-helical inner membrane protein, ION channel, cytoplasm membrane, transport protein; HET: BOG; 2.40A {Salmonella enterica subsp}
Probab=38.10 E-value=1.4e+02 Score=24.95 Aligned_cols=87 Identities=10% Similarity=-0.012 Sum_probs=47.7
Q ss_pred CcHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hh-hhhhhhccccccccCCCCcchHHHHHHHHHHH
Q psy6903 81 CPYTHLEDVAERRSNLLIALFKIGAELLGGYIIIKYIQLLWSLE-IA-HVHVGQANTVYNCQADLQVPVLLGMLVEGVAT 158 (249)
Q Consensus 81 NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~-~~-~~~~~~~~~~~~c~~~~~~s~~~~~~~E~~~T 158 (249)
|-.....-.+.||.++.+.+-.+..=.+|=++|+.+.-.+.... .. ....... ...-.......+..+.|+-=+.+-
T Consensus 83 n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~~g~~~~~~~~~~-~~~ia~~K~~~~~~~~f~~gIlcN 161 (261)
T 4fc4_A 83 HTMFLTLGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTSI-VHSVALAKTTAPATVLFFKGALCN 161 (261)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTSSCTTSH-HHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCchHHHH-HHHHHHHHhcCcHHHHHHHHHHHH
Confidence 66654455677899999998887777777777766655544321 00 0000000 000000111235667777777777
Q ss_pred HHHHHHHHHh
Q psy6903 159 FLCRFMSRVF 168 (249)
Q Consensus 159 f~l~~~v~~~ 168 (249)
++.++.++..
T Consensus 162 ~lVclaVw~~ 171 (261)
T 4fc4_A 162 WLVCLAIWMA 171 (261)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777777654
No 28
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=31.86 E-value=7.2 Score=34.05 Aligned_cols=18 Identities=11% Similarity=0.054 Sum_probs=15.5
Q ss_pred CCCCCCcHHHHHHHHhcc
Q psy6903 76 DDASACPYTHLEDVAERR 93 (249)
Q Consensus 76 sGah~NPavTla~~l~g~ 93 (249)
+|||++||.+++..+..+
T Consensus 12 TgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 12 TGGHVFPALACAREFQAR 29 (365)
T ss_dssp SHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhC
Confidence 679999999999998753
No 29
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=25.10 E-value=3.1e+02 Score=23.11 Aligned_cols=86 Identities=10% Similarity=-0.017 Sum_probs=47.6
Q ss_pred CcHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHHHH--hhhhhhhh--hhhccccccccCCCCcchHHHHHHHHH
Q psy6903 81 CPYTHLEDVAERRSNLLIALFKIGAELLGGYIIIKYIQLLW--SLEIAHVH--VGQANTVYNCQADLQVPVLLGMLVEGV 156 (249)
Q Consensus 81 NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~--~~~~~~~~--~~~~~~~~~c~~~~~~s~~~~~~~E~~ 156 (249)
|-..+ ...+.||+++.+.+-.+..=.+|=++|+.+.-.+. .......+ .+.. ...-.....+.+..+.|+-=+.
T Consensus 93 n~l~~-~a~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~~~~~-~~~ia~~K~~~~~~~~f~~GIl 170 (285)
T 3kcu_A 93 TVLIV-VAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGLN-VLQTADHKVHHTFIEAVCLGIL 170 (285)
T ss_dssp THHHH-HHHTTTCCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTHHHHH-HHHHHHHTTCSCHHHHHHHHHH
T ss_pred chHHH-HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCchHHHHH-HHHHHHHHhCCCHHHHHHHHHH
Confidence 74444 44678999999887666665566666655554442 11111000 0000 0001112234577888888888
Q ss_pred HHHHHHHHHHHh
Q psy6903 157 ATFLCRFMSRVF 168 (249)
Q Consensus 157 ~Tf~l~~~v~~~ 168 (249)
+-++.++.++..
T Consensus 171 cN~lVclaVw~~ 182 (285)
T 3kcu_A 171 ANLMVCLAVWMS 182 (285)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888888887654
Done!