Query psy6903
Match_columns 249
No_of_seqs 136 out of 1319
Neff 7.7
Searched_HMMs 13730
Date Fri Aug 16 21:25:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6903.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/6903hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fx8a_ f.19.1.1 (A:) Glycerol 100.0 9.2E-44 6.7E-48 307.3 22.6 217 27-244 2-252 (254)
2 d1rc2a_ f.19.1.1 (A:) Aquapori 100.0 7.8E-44 5.7E-48 303.6 20.5 216 29-246 3-231 (231)
3 d1ymga1 f.19.1.1 (A:6-239) Aqu 100.0 2.3E-42 1.7E-46 295.1 21.0 204 29-243 6-219 (234)
4 d1j4na_ f.19.1.1 (A:) Aquapori 100.0 8.3E-41 6.1E-45 287.9 20.3 205 29-244 12-235 (249)
5 d1ymga1 f.19.1.1 (A:6-239) Aqu 98.8 7.3E-09 5.3E-13 86.3 9.5 100 145-246 2-107 (234)
6 d1rc2a_ f.19.1.1 (A:) Aquapori 98.6 5.6E-08 4.1E-12 80.4 9.4 96 148-245 2-106 (231)
7 d1fx8a_ f.19.1.1 (A:) Glycerol 98.4 3.9E-07 2.8E-11 76.4 8.3 96 147-244 2-105 (254)
8 d1j4na_ f.19.1.1 (A:) Aquapori 98.3 4.4E-07 3.2E-11 75.8 7.8 98 145-244 8-120 (249)
9 d1pn3a_ c.87.1.5 (A:) TDP-epi- 24.6 5.4 0.00039 31.8 -0.9 18 76-93 10-27 (391)
10 d1f0ka_ c.87.1.2 (A:) Peptidog 21.8 7.2 0.00052 30.6 -0.6 17 76-92 10-26 (351)
No 1
>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=9.2e-44 Score=307.29 Aligned_cols=217 Identities=14% Similarity=0.112 Sum_probs=168.3
Q ss_pred HHHHHHHHHHHHHHHHH----hhHHHHHhhhcchhH----HHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHhccCchHH
Q psy6903 27 LRQDLLLEVVATAELCA----SCYELIIVADNWGVY----AYGVALYILTIWWSLNWDDASACPYTHLEDVAERRSNLLI 98 (249)
Q Consensus 27 ~R~~~~~EfigT~~l~~----~~~~~~~~~~~~g~~----~~g~~l~~~~~~~~~~~sGah~NPavTla~~l~g~~~~~~ 98 (249)
+||++++||+||++++. ++..........+.+ ++|+.++.+++.+ .++||||+|||||+++++.||+++.+
T Consensus 2 l~~~~lAEflGT~~lvf~g~g~~~~~~~~~~~~~~~~ia~~~g~~v~~~i~~~-g~vSGaH~NPAVTla~~i~g~~~~~~ 80 (254)
T d1fx8a_ 2 LKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIWGLGVAMAIYLT-AGVSGAHLNPAVTIALWLFACFDKRK 80 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHH-HHHHCCCCSHHHHHHHHHHSCCCGGG
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhccccCCCcchHHHHHHHHHHHHHHHHHH-hccccceEChhhHHHHHHcCCCcHHH
Confidence 57999999999999853 222222222223322 4566666655555 45799999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcc----------cccccc-CCCCcchHHHHHHHHHHHHHHHHHHHH
Q psy6903 99 ALFKIGAELLGGYIIIKYIQLLWSLEIAHVHVGQAN----------TVYNCQ-ADLQVPVLLGMLVEGVATFLCRFMSRV 167 (249)
Q Consensus 99 ~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~----------~~~~c~-~~~~~s~~~~~~~E~~~Tf~l~~~v~~ 167 (249)
++.|+++|++||++|+.+++.+++..+.+...+.+. ....|+ ++.+.|..++++.|+++||+|+++++.
T Consensus 81 ~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~s~~~~~~~E~v~Tf~lv~~il~ 160 (254)
T d1fx8a_ 81 VIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILA 160 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccCCccchhhcceeecCCCccccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999987655443322110 122343 556789999999999999999999998
Q ss_pred hhhc-CCc----hhhhHHHHHHHHHHHhhhccccccccchhhhhhhhcc----------CCcccccceeehhhhhHHHHH
Q psy6903 168 FAEK-VPK----LSMILDATFGTLLVVAAFSYSGGYFNPALAGSLKYGC----------TGHTVTEHLVVYWLSPTIGSL 232 (249)
Q Consensus 168 ~~~~-~~~----~~~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~----------~~~~~~~~~wVYwvgP~~Ga~ 232 (249)
+.++ +++ ..++.+++.+..++...+++||++||||||+||++.. .+.++|+|+||||+||++|++
T Consensus 161 ~~~~~~~~~~~~~~~l~iG~~v~~~~~~~g~~TG~s~NPAR~lgpai~~~~~~~~~~~~~~~~~~~~~wvy~vgP~~Ga~ 240 (254)
T d1fx8a_ 161 LTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAI 240 (254)
T ss_dssp HHCTTSSSCCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHHHHTTHHHHH
T ss_pred HhcCccCCCcccccchHHHHHHHHHHhhcccccccccChHHHHHHHHHHhhcccccccccCCCCCCeeehHhHHHHHHHH
Confidence 8653 222 3457778888888888999999999999999998763 234689999999999999999
Q ss_pred HHHHHHHhhhcc
Q psy6903 233 LSVFAFNRMQAS 244 (249)
Q Consensus 233 la~~~~~~~~~~ 244 (249)
+++++||++..+
T Consensus 241 ia~~~y~~l~~~ 252 (254)
T d1fx8a_ 241 VGAFAYRKLIGR 252 (254)
T ss_dssp HHHHHHHHHTGG
T ss_pred HHHHHHHHHHhh
Confidence 999999998765
No 2
>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=7.8e-44 Score=303.64 Aligned_cols=216 Identities=16% Similarity=0.152 Sum_probs=168.3
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHhhh-----cchh----HHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHhccCchHHH
Q psy6903 29 QDLLLEVVATAELCASCYELIIVAD-----NWGV----YAYGVALYILTIWWSLNWDDASACPYTHLEDVAERRSNLLIA 99 (249)
Q Consensus 29 ~~~~~EfigT~~l~~~~~~~~~~~~-----~~g~----~~~g~~l~~~~~~~~~~~sGah~NPavTla~~l~g~~~~~~~ 99 (249)
|++++||+||++++.......+..+ ..+. .++|+.++.++... .++||||+|||||+++++.||+++++.
T Consensus 3 r~~~aEfiGT~llvf~g~gs~~~~~~~~~~~~~~~~ia~~~Gl~v~~~i~~~-g~iSGaH~NPAVTla~~~~g~~~~~~~ 81 (231)
T d1rc2a_ 3 RKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAV-GHISGGHFNPAVTIGLWAGGRFPAKEV 81 (231)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSCTTTCCHHHHHHHHHHHHHHHHHHHH-TTTTCCCCSHHHHHHHHHTTCSCTTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHHHHHHHHHH-hcccCccCCCchhHHHHhcCCCcHHHH
Confidence 7899999999998653322222211 1121 24566666655444 468999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh--hccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcCC--ch
Q psy6903 100 LFKIGAELLGGYIIIKYIQLLWSLEIAHVHVG--QANTVYNCQADLQVPVLLGMLVEGVATFLCRFMSRVFAEKVP--KL 175 (249)
Q Consensus 100 ~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~--~~~~~~~c~~~~~~s~~~~~~~E~~~Tf~l~~~v~~~~~~~~--~~ 175 (249)
+.|+++|++||++|+.+++.+++.+....... .......|.++.+.+..++++.|+++||+++++++...++++ ..
T Consensus 82 ~~Yi~aQ~lGa~~g~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~t~~l~~~i~~~~~~~~~~~~ 161 (231)
T d1rc2a_ 82 VGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAGF 161 (231)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCTTSSSSCCCHHHHHHHHHHHHHHHHHHHHHHTSTTSCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccCCcccchhhhhHHHHHHHHHHHHHHhhhhcccCcccc
Confidence 99999999999999999999887543211111 111234466777889999999999999999999987655432 24
Q ss_pred hhhHHHHHHHHHHHhhhccccccccchhhhhhhhccCCcccccceeehhhhhHHHHHHHHHHHHhhhcccc
Q psy6903 176 SMILDATFGTLLVVAAFSYSGGYFNPALAGSLKYGCTGHTVTEHLVVYWLSPTIGSLLSVFAFNRMQASKI 246 (249)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~~~~~~~~~~wVYwvgP~~Ga~la~~~~~~~~~~~~ 246 (249)
.++.+++.+..+...++++||++||||||+||++..++ ..|+++|+||++|++|+++++++||++.++||
T Consensus 162 ~~~~ig~~v~~~~~~~~~~tG~~~NPAr~~gp~i~~~~-~~~~~~wvy~~~P~~Ga~~a~~ly~~~~~~~d 231 (231)
T d1rc2a_ 162 APIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGG-WALEQLWFFWVVPIVGGIIGGLIYRTLLEKRD 231 (231)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCS-HHHHHTTHHHHHHHHHHHHHHHHHHHSSSCCC
T ss_pred hhhHHHHHHHHhhhhccccCCcccchHhhhHHHHHcCC-CcccceeEEehHHHHHHHHHHHHHHHHhcCCC
Confidence 56778888888888999999999999999999997654 34689999999999999999999999987765
No 3
>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=2.3e-42 Score=295.10 Aligned_cols=204 Identities=18% Similarity=0.080 Sum_probs=159.9
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHhhh--cchh----HHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHhccCchHHHHHH
Q psy6903 29 QDLLLEVVATAELCASCYELIIVAD--NWGV----YAYGVALYILTIWWSLNWDDASACPYTHLEDVAERRSNLLIALFK 102 (249)
Q Consensus 29 ~~~~~EfigT~~l~~~~~~~~~~~~--~~g~----~~~g~~l~~~~~~~~~~~sGah~NPavTla~~l~g~~~~~~~~~y 102 (249)
|++++||+||++++........... ..+. .++|+.++.++... .++||||+|||||+++++.|++++.+++.|
T Consensus 6 r~~laEf~GT~~lvf~g~gs~~~~~~~~~~~~~ial~~G~~v~~~i~~~-g~iSGaH~NPAVTla~~~~g~i~~~~~~~Y 84 (234)
T d1ymga1 6 RAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAV-GHISGAHVNPAVTFAFLVGSQMSLLRAICY 84 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSCC-CHHHHHHHHHHHHHHHHHHHHHH-TTTTCCCCSHHHHHHHHHTTSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHH-hccccCccCchhhHHHHhccCCChhheeee
Confidence 8899999999998654332221111 1111 24566666655554 468999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcCC-c---hhhh
Q psy6903 103 IGAELLGGYIIIKYIQLLWSLEIAHVHVGQANTVYNCQADLQVPVLLGMLVEGVATFLCRFMSRVFAEKVP-K---LSMI 178 (249)
Q Consensus 103 i~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~s~~~~~~~E~~~Tf~l~~~v~~~~~~~~-~---~~~~ 178 (249)
+++|++||++|+.+++.+++.+..+. ...+...+..+..++++.|+++|++++++++.+.+++. + ..++
T Consensus 85 i~aQ~lGa~~ga~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~E~~~t~~lv~~i~~~~~~~~~~~~~~~~l 157 (234)
T d1ymga1 85 MVAQLLGAVAGAAVLYSVTPPAVRGN-------LALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVAL 157 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTTCTT-------TTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCSCCCCHHH
T ss_pred eehHHHHHHHHHHHHHHHcCcccccc-------ccccccCccchhhHHHHHHHHHHHHHHHhheeeecCCccCcCcceeE
Confidence 99999999999999999886543221 12233556778999999999999999999998765432 2 2346
Q ss_pred HHHHHHHHHHHhhhccccccccchhhhhhhhccCCcccccceeehhhhhHHHHHHHHHHHHhhhc
Q psy6903 179 LDATFGTLLVVAAFSYSGGYFNPALAGSLKYGCTGHTVTEHLVVYWLSPTIGSLLSVFAFNRMQA 243 (249)
Q Consensus 179 ~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~~~~~~~~~~wVYwvgP~~Ga~la~~~~~~~~~ 243 (249)
.+++.+......+++.||++||||||+||++..+ .|+++|+||+||++|+++++++||++..
T Consensus 158 ~ig~~v~~~~~~~~~~tG~~~NPAR~~gp~v~~~---~~~~~wiy~vgP~~Ga~laa~ly~~~~~ 219 (234)
T d1ymga1 158 AVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTR---NFTNHWVYWVGPVIGAGLGSLLYDFLLF 219 (234)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT---CCTTTTHHHHHHHHHHHHHHHHHHTTTS
T ss_pred eehHHHHHHHHHhcccccccccchhhhhHHHhcc---CccCeeeeehHHHHHHHHHHHHHHHHHc
Confidence 6777777777788999999999999999998853 5889999999999999999999998744
No 4
>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=8.3e-41 Score=287.87 Aligned_cols=205 Identities=16% Similarity=0.110 Sum_probs=158.4
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHh------hh----c-chh----HHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHhcc
Q psy6903 29 QDLLLEVVATAELCASCYELIIV------AD----N-WGV----YAYGVALYILTIWWSLNWDDASACPYTHLEDVAERR 93 (249)
Q Consensus 29 ~~~~~EfigT~~l~~~~~~~~~~------~~----~-~g~----~~~g~~l~~~~~~~~~~~sGah~NPavTla~~l~g~ 93 (249)
|++++||+|||+++......... .+ . .+. .++|+.++.++... .++||||+|||||+++++.||
T Consensus 12 r~~~aEf~gTfllvf~~~gs~~~~~~~~~~~~~~~~~~~~l~ial~~G~~v~~~i~~~-g~iSGaH~NPAVTla~~~~g~ 90 (249)
T d1j4na_ 12 RAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSV-GHISGAHLNPAVTLGLLLSCQ 90 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHHHCCCCCHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccccccCCccccHHHHHHHHHHHHHHHHHHh-hccccceeCchhHHHHHhccc
Confidence 78999999999986543221110 00 0 111 24566666555554 468999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHhhhcCC
Q psy6903 94 SNLLIALFKIGAELLGGYIIIKYIQLLWSLEIAHVHVGQANTVYNCQADLQVPVLLGMLVEGVATFLCRFMSRVFAEKVP 173 (249)
Q Consensus 94 ~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~s~~~~~~~E~~~Tf~l~~~v~~~~~~~~ 173 (249)
+++.+.+.|+++|++||++|+.+++.+++...... ...+.+.++.+..++++.|+++||+++++++.+.+++.
T Consensus 91 i~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~E~~~T~~l~~~i~~~~~~~~ 163 (249)
T d1j4na_ 91 ISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNS-------LGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRR 163 (249)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTCC-------TTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHHTCSSC
T ss_pred cchhheeeeeeHHHHHHHHHHhhheeecccccccc-------ccceeccCCCchHHHHHHHHHHHHHHHHhheeeccccc
Confidence 99999999999999999999999999876432211 11223445677889999999999999999998865432
Q ss_pred c----hhhhHHHHHHHHHHHhhhccccccccchhhhhhhhccCCcccccceeehhhhhHHHHHHHHHHHHhhhcc
Q psy6903 174 K----LSMILDATFGTLLVVAAFSYSGGYFNPALAGSLKYGCTGHTVTEHLVVYWLSPTIGSLLSVFAFNRMQAS 244 (249)
Q Consensus 174 ~----~~~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~~~~~~~~~~wVYwvgP~~Ga~la~~~~~~~~~~ 244 (249)
+ ..++.+++.+......++++||++|||||++||++.. ..|+++|+||+||++|+++++++|+++.+.
T Consensus 164 ~~~~~~~p~~ig~~v~~~~~~~~~~tG~~~NPAR~lgp~i~~---~~~~~~wvy~vgP~iGa~la~~~y~~~~~p 235 (249)
T d1j4na_ 164 RDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVIT---HNFQDHWIFWVGPFIGAALAVLIYDFILAP 235 (249)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHT---TCCTTTTHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred CCCCCCchhHHHHHHHHHHHhcccccCcccChhhhhhHHHhc---cCccCeeeeehHHHHHHHHHHHHHHHhcCC
Confidence 2 2356677777677778899999999999999999885 358899999999999999999999987654
No 5
>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]}
Probab=98.81 E-value=7.3e-09 Score=86.27 Aligned_cols=100 Identities=15% Similarity=0.139 Sum_probs=76.6
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhhcC--Cchh----hhHHHHHHHHHHHhhhccccccccchhhhhhhhccCCccccc
Q psy6903 145 VPVLLGMLVEGVATFLCRFMSRVFAEKV--PKLS----MILDATFGTLLVVAAFSYSGGYFNPALAGSLKYGCTGHTVTE 218 (249)
Q Consensus 145 ~s~~~~~~~E~~~Tf~l~~~v~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~~~~~~~~ 218 (249)
.|.++.++.|+++||++++......-.. ...+ .+..++.+...++..++.||+=+|||.+++.... +.-.|.
T Consensus 2 ~s~~r~~laEf~GT~~lvf~g~gs~~~~~~~~~~~~~ial~~G~~v~~~i~~~g~iSGaH~NPAVTla~~~~--g~i~~~ 79 (234)
T d1ymga1 2 ASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVG--SQMSLL 79 (234)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHCSCC-CHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHT--TSSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHhccccCccCchhhHHHHhc--cCCChh
Confidence 4789999999999999998776543221 1111 2334555666677889999999999999997664 345678
Q ss_pred ceeehhhhhHHHHHHHHHHHHhhhcccc
Q psy6903 219 HLVVYWLSPTIGSLLSVFAFNRMQASKI 246 (249)
Q Consensus 219 ~~wVYwvgP~~Ga~la~~~~~~~~~~~~ 246 (249)
....||+++++|+++++.+.+.+.+++.
T Consensus 80 ~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~ 107 (234)
T d1ymga1 80 RAICYMVAQLLGAVAGAAVLYSVTPPAV 107 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCTTT
T ss_pred heeeeeehHHHHHHHHHHHHHHHcCccc
Confidence 8899999999999999998888776643
No 6
>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]}
Probab=98.63 E-value=5.6e-08 Score=80.44 Aligned_cols=96 Identities=21% Similarity=0.213 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh---hc--CCchh----hhHHHHHHHHHHHhhhccccccccchhhhhhhhccCCccccc
Q psy6903 148 LLGMLVEGVATFLCRFMSRVFA---EK--VPKLS----MILDATFGTLLVVAAFSYSGGYFNPALAGSLKYGCTGHTVTE 218 (249)
Q Consensus 148 ~~~~~~E~~~Tf~l~~~v~~~~---~~--~~~~~----~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~~~~~~~~ 218 (249)
.+.++.|+++||++++...... +. +.... .+..++.+...++..++.||+=+|||.+++.... +...|.
T Consensus 2 ~r~~~aEfiGT~llvf~g~gs~~~~~~~~~~~~~~~~ia~~~Gl~v~~~i~~~g~iSGaH~NPAVTla~~~~--g~~~~~ 79 (231)
T d1rc2a_ 2 FRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAG--GRFPAK 79 (231)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSCTTTCCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHT--TCSCTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHHHHHHHHHHhcccCccCCCchhHHHHhc--CCCcHH
Confidence 5789999999999998765321 11 11111 2334455556667889999999999999987664 345688
Q ss_pred ceeehhhhhHHHHHHHHHHHHhhhccc
Q psy6903 219 HLVVYWLSPTIGSLLSVFAFNRMQASK 245 (249)
Q Consensus 219 ~~wVYwvgP~~Ga~la~~~~~~~~~~~ 245 (249)
..-.|++++++|+++++.+.+.+.+++
T Consensus 80 ~~~~Yi~aQ~lGa~~g~~l~~~i~~~~ 106 (231)
T d1rc2a_ 80 EVVGYVIAQVVGGIVAAALLYLIASGK 106 (231)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 889999999999999999888877654
No 7
>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]}
Probab=98.38 E-value=3.9e-07 Score=76.38 Aligned_cols=96 Identities=13% Similarity=0.037 Sum_probs=69.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh----hhcCCchh----hhHHHHHHHHHHHhhhccccccccchhhhhhhhccCCccccc
Q psy6903 147 VLLGMLVEGVATFLCRFMSRVF----AEKVPKLS----MILDATFGTLLVVAAFSYSGGYFNPALAGSLKYGCTGHTVTE 218 (249)
Q Consensus 147 ~~~~~~~E~~~Tf~l~~~v~~~----~~~~~~~~----~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~~~~~~~~~~ 218 (249)
+.|-.+.|+++||+|++.-... ...+++.+ .+.-++.+...++..++.||+=+|||.+++..+.. .-.|.
T Consensus 2 l~~~~lAEflGT~~lvf~g~g~~~~~~~~~~~~~~~~ia~~~g~~v~~~i~~~g~vSGaH~NPAVTla~~i~g--~~~~~ 79 (254)
T d1fx8a_ 2 LKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIWGLGVAMAIYLTAGVSGAHLNPAVTIALWLFA--CFDKR 79 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHS--CCCGG
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhccccCCCcchHHHHHHHHHHHHHHHHHHhccccceEChhhHHHHHHcC--CCcHH
Confidence 4577899999999998754322 12232222 23344555556677899999999999999977653 35678
Q ss_pred ceeehhhhhHHHHHHHHHHHHhhhcc
Q psy6903 219 HLVVYWLSPTIGSLLSVFAFNRMQAS 244 (249)
Q Consensus 219 ~~wVYwvgP~~Ga~la~~~~~~~~~~ 244 (249)
+...|++++++|+++++.+-+.+.++
T Consensus 80 ~~~~Yi~aQ~lGa~~ga~l~~~~~~~ 105 (254)
T d1fx8a_ 80 KVIPFIVSQVAGAFCAAALVYGLYYN 105 (254)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 88999999999999999976665443
No 8
>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=98.35 E-value=4.4e-07 Score=75.84 Aligned_cols=98 Identities=16% Similarity=0.130 Sum_probs=72.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhh-------cC-C--c-hh----hhHHHHHHHHHHHhhhccccccccchhhhhhhh
Q psy6903 145 VPVLLGMLVEGVATFLCRFMSRVFAE-------KV-P--K-LS----MILDATFGTLLVVAAFSYSGGYFNPALAGSLKY 209 (249)
Q Consensus 145 ~s~~~~~~~E~~~Tf~l~~~v~~~~~-------~~-~--~-~~----~~~~~~~~~~~~~~~~~~TG~~~NPAra~~~~~ 209 (249)
...++.++.|+++||++++....... .+ . . .. .+.-++.+..+++..++.||+=+|||.+++..+
T Consensus 8 ~~~wr~~~aEf~gTfllvf~~~gs~~~~~~~~~~~~~~~~~~~~l~ial~~G~~v~~~i~~~g~iSGaH~NPAVTla~~~ 87 (249)
T d1j4na_ 8 KLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLL 87 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccCCccccHHHHHHHHHHHHHHHHHHhhccccceeCchhHHHHHh
Confidence 35689999999999999987754311 01 0 1 11 123345555566788899999999999998776
Q ss_pred ccCCcccccceeehhhhhHHHHHHHHHHHHhhhcc
Q psy6903 210 GCTGHTVTEHLVVYWLSPTIGSLLSVFAFNRMQAS 244 (249)
Q Consensus 210 ~~~~~~~~~~~wVYwvgP~~Ga~la~~~~~~~~~~ 244 (249)
. +.-.+...-.|++++++|+++++.+.+.+.++
T Consensus 88 ~--g~i~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~ 120 (249)
T d1j4na_ 88 S--CQISVLRAIMYIIAQCVGAIVATAILSGITSS 120 (249)
T ss_dssp T--TSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred c--cccchhheeeeeeHHHHHHHHHHhhheeeccc
Confidence 5 34567788899999999999999988887664
No 9
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}
Probab=24.63 E-value=5.4 Score=31.80 Aligned_cols=18 Identities=11% Similarity=0.089 Sum_probs=16.2
Q ss_pred CCCCCCcHHHHHHHHhcc
Q psy6903 76 DDASACPYTHLEDVAERR 93 (249)
Q Consensus 76 sGah~NPavTla~~l~g~ 93 (249)
|+||+||++.++..+..+
T Consensus 10 t~Ghi~P~laLA~~L~~r 27 (391)
T d1pn3a_ 10 SRGDTEPLVALAARLREL 27 (391)
T ss_dssp SHHHHHHHHHHHHHHHHT
T ss_pred ChhHHHHHHHHHHHHHHC
Confidence 679999999999999864
No 10
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}
Probab=21.76 E-value=7.2 Score=30.63 Aligned_cols=17 Identities=6% Similarity=-0.044 Sum_probs=15.0
Q ss_pred CCCCCCcHHHHHHHHhc
Q psy6903 76 DDASACPYTHLEDVAER 92 (249)
Q Consensus 76 sGah~NPavTla~~l~g 92 (249)
+|||.+||.+++..+..
T Consensus 10 tGGHv~~a~al~~~L~~ 26 (351)
T d1f0ka_ 10 TGGHVFPGLAVAHHLMA 26 (351)
T ss_dssp SHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHh
Confidence 46999999999999964
Done!