BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6905
(527 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 329 bits (844), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 158/271 (58%), Positives = 196/271 (72%), Gaps = 3/271 (1%)
Query: 111 LVEIDYNKLXXXXXXXXXXXXKVYKGIYEKQEVAIKVAHPNPDENI---LENVKQEGKLL 167
L+EID+ +L KVY+ + EVA+K A +PDE+I +ENV+QE KL
Sbjct: 1 LLEIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLF 60
Query: 168 WLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNY 227
+ H NI++L GVCL+ P LCLVME+ARGGPLNRVL+G++I PD+LV+WA+QIA GMNY
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNY 120
Query: 228 LHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAW 287
LH +A + +IHRDLKSSN+L+ + +EN DL K LKITDFGLARE ++TT MSAAG YAW
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAW 180
Query: 288 MAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCP 347
MAPEVI+ S+FSK SDVWSYGV+LWELLTGE+P++ I+ NKL LPIPSTCP
Sbjct: 181 MAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCP 240
Query: 348 QLFKTLMEACWEADSHMRPSFKTILKALNNI 378
+ F LME CW D H RPSF IL L I
Sbjct: 241 EPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 139/273 (50%), Gaps = 22/273 (8%)
Query: 114 IDYNKLXXXXXXXXXXXXKVYKGIYEKQEVAIK-VAHPNPDENILENVKQEGKLLWLFDH 172
IDY ++ V K + ++VAIK + + + + ++Q ++ +H
Sbjct: 6 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRV----NH 61
Query: 173 RNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVL----VDWAIQIAEGMNYL 228
NIV L G CL +CLVMEYA GG L VL G + P + W +Q ++G+ YL
Sbjct: 62 PNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 119
Query: 229 HCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAW 287
H P +LIHRDLK N+LL LKI DFG A ++ THM+ G+ AW
Sbjct: 120 HSMQPKALIHRDLKPPNLLLVA-------GGTVLKICDFGTACDI--QTHMTNNKGSAAW 170
Query: 288 MAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXX-XXXNKLTLPIPSTC 346
MAPEV + S +S+ DV+S+G++LWE++T P+ I N P+
Sbjct: 171 MAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNL 230
Query: 347 PQLFKTLMEACWEADSHMRPSFKTILKALNNIV 379
P+ ++LM CW D RPS + I+K + +++
Sbjct: 231 PKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 263
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 139/273 (50%), Gaps = 22/273 (8%)
Query: 114 IDYNKLXXXXXXXXXXXXKVYKGIYEKQEVAIK-VAHPNPDENILENVKQEGKLLWLFDH 172
IDY ++ V K + ++VAIK + + + + ++Q ++ +H
Sbjct: 5 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRV----NH 60
Query: 173 RNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVL----VDWAIQIAEGMNYL 228
NIV L G CL +CLVMEYA GG L VL G + P + W +Q ++G+ YL
Sbjct: 61 PNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 118
Query: 229 HCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAW 287
H P +LIHRDLK N+LL LKI DFG A ++ THM+ G+ AW
Sbjct: 119 HSMQPKALIHRDLKPPNLLLVA-------GGTVLKICDFGTACDI--QTHMTNNKGSAAW 169
Query: 288 MAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXX-XXXNKLTLPIPSTC 346
MAPEV + S +S+ DV+S+G++LWE++T P+ I N P+
Sbjct: 170 MAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNL 229
Query: 347 PQLFKTLMEACWEADSHMRPSFKTILKALNNIV 379
P+ ++LM CW D RPS + I+K + +++
Sbjct: 230 PKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 116/243 (47%), Gaps = 19/243 (7%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VA+K ++ QE ++L + H NIV LIGVC Q + +VME +GG
Sbjct: 142 VAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLT 201
Query: 203 VL--AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L G ++R L+ A GM YL + IHRDL + N L++E
Sbjct: 202 FLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEK--------N 250
Query: 261 TLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
LKI+DFG++RE + ++ G W APE + +S SDVWS+G++LWE +
Sbjct: 251 VLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
Query: 317 -GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
G PY +++ LP P CP LME CW + RPSF TI + L
Sbjct: 311 LGASPYPNLSNQQTREFVEKGG-RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQEL 369
Query: 376 NNI 378
+I
Sbjct: 370 QSI 372
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 115/243 (47%), Gaps = 19/243 (7%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VA+K ++ QE ++L + H NIV LIGVC Q + +VME +GG
Sbjct: 142 VAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLT 201
Query: 203 VL--AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L G ++R L+ A GM YL + IHRDL + N L++E
Sbjct: 202 FLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEK--------N 250
Query: 261 TLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
LKI+DFG++RE ++ G W APE + +S SDVWS+G++LWE +
Sbjct: 251 VLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
Query: 317 -GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
G PY +++ LP P CP LME CW + RPSF TI + L
Sbjct: 311 LGASPYPNLSNQQTREFVEKGG-RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQEL 369
Query: 376 NNI 378
+I
Sbjct: 370 QSI 372
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 130/264 (49%), Gaps = 24/264 (9%)
Query: 133 VYKGIYEKQE-----VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK 187
V++GIY E VAIK +++ E QE + FDH +IV LIGV ++P
Sbjct: 406 VHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP- 464
Query: 188 LCLVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSN 245
+ ++ME G L L RK D+ L+ +A Q++ + YL + +HRD+ + N
Sbjct: 465 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARN 521
Query: 246 VLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKAS 302
VL+S +K+ DFGL+R + +T+ A+ WMAPE I F+ AS
Sbjct: 522 VLVSAT--------DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 573
Query: 303 DVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEAD 361
DVW +GV +WE+L G P++ + N LP+P CP +LM CW D
Sbjct: 574 DVWMFGVCMWEILMHGVKPFQGVK-NNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 632
Query: 362 SHMRPSFKTILKALNNIVHSEFIQ 385
RP F + L+ I+ E +Q
Sbjct: 633 PSRRPRFTELKAQLSTILEEEKLQ 656
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 130/264 (49%), Gaps = 24/264 (9%)
Query: 133 VYKGIYEKQE-----VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK 187
V++GIY E VAIK +++ E QE + FDH +IV LIGV ++P
Sbjct: 406 VHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP- 464
Query: 188 LCLVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSN 245
+ ++ME G L L RK D+ L+ +A Q++ + YL + +HRD+ + N
Sbjct: 465 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARN 521
Query: 246 VLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKAS 302
VL+S +K+ DFGL+R + +T+ A+ WMAPE I F+ AS
Sbjct: 522 VLVSSN--------DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 573
Query: 303 DVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEAD 361
DVW +GV +WE+L G P++ + N LP+P CP +LM CW D
Sbjct: 574 DVWMFGVCMWEILMHGVKPFQGVK-NNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 632
Query: 362 SHMRPSFKTILKALNNIVHSEFIQ 385
RP F + L+ I+ E +Q
Sbjct: 633 PSRRPRFTELKAQLSTILEEEKLQ 656
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 126/256 (49%), Gaps = 23/256 (8%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV-MEYARG 197
+K A+K + D + EG ++ F H N++SL+G+CL+S LV + Y +
Sbjct: 55 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 114
Query: 198 GPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
G L + P V L+ + +Q+A+GM YL A +HRDL + N +L E
Sbjct: 115 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKF--- 168
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAAGTYA------WMAPEVIKTSIFSKASDVWSYGV 309
T+K+ DFGLAR++Y + S WMA E ++T F+ SDVWS+GV
Sbjct: 169 -----TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 223
Query: 310 VLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+LWEL+T G PY +N + L P CP +M CW + MRPSF
Sbjct: 224 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSF 282
Query: 369 KTILKALNNIVHSEFI 384
++ ++ I S FI
Sbjct: 283 SELVSRISAIF-STFI 297
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 126/256 (49%), Gaps = 23/256 (8%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV-MEYARG 197
+K A+K + D + EG ++ F H N++SL+G+CL+S LV + Y +
Sbjct: 57 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 116
Query: 198 GPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
G L + P V L+ + +Q+A+GM YL A +HRDL + N +L E
Sbjct: 117 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKF--- 170
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAAGTYA------WMAPEVIKTSIFSKASDVWSYGV 309
T+K+ DFGLAR++Y + S WMA E ++T F+ SDVWS+GV
Sbjct: 171 -----TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 225
Query: 310 VLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+LWEL+T G PY +N + L P CP +M CW + MRPSF
Sbjct: 226 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSF 284
Query: 369 KTILKALNNIVHSEFI 384
++ ++ I S FI
Sbjct: 285 SELVSRISAIF-STFI 299
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 126/256 (49%), Gaps = 23/256 (8%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV-MEYARG 197
+K A+K + D + EG ++ F H N++SL+G+CL+S LV + Y +
Sbjct: 57 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 116
Query: 198 GPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
G L + P V L+ + +Q+A+GM YL A +HRDL + N +L E
Sbjct: 117 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKF--- 170
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAAGTYA------WMAPEVIKTSIFSKASDVWSYGV 309
T+K+ DFGLAR++Y + S WMA E ++T F+ SDVWS+GV
Sbjct: 171 -----TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 225
Query: 310 VLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+LWEL+T G PY +N + L P CP +M CW + MRPSF
Sbjct: 226 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSF 284
Query: 369 KTILKALNNIVHSEFI 384
++ ++ I S FI
Sbjct: 285 SELVSRISAIF-STFI 299
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 135/274 (49%), Gaps = 31/274 (11%)
Query: 133 VYKGIYEKQ-----EVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK 187
VY G Y Q + AIK + +E +EG L+ +H N+++LIG+ L
Sbjct: 37 VYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG 96
Query: 188 L-CLVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSS 244
L +++ Y G L + + + P V L+ + +Q+A GM YL A +HRDL +
Sbjct: 97 LPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---AEQKFVHRDLAAR 153
Query: 245 NVLLSEPIENEDLQFKTLKITDFGLAREVYK------TTHMSAAGTYAWMAPEVIKTSIF 298
N +L E T+K+ DFGLAR++ H A W A E ++T F
Sbjct: 154 NCMLDESF--------TVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRF 205
Query: 299 SKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEAC 357
+ SDVWS+GV+LWELLT G PY+ I+ + LP P CP +M+ C
Sbjct: 206 TTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGR-RLPQPEYCPDSLYQVMQQC 264
Query: 358 WEADSHMRPSFKTILKALNNIVHS----EFIQTP 387
WEAD +RP+F+ ++ + IV + ++Q P
Sbjct: 265 WEADPAVRPTFRVLVGEVEQIVSALLGDHYVQLP 298
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 126/256 (49%), Gaps = 23/256 (8%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV-MEYARG 197
+K A+K + D + EG ++ F H N++SL+G+CL+S LV + Y +
Sbjct: 54 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 113
Query: 198 GPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
G L + P V L+ + +Q+A+GM YL A +HRDL + N +L E
Sbjct: 114 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKF--- 167
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAAGTYA------WMAPEVIKTSIFSKASDVWSYGV 309
T+K+ DFGLAR++Y + S WMA E ++T F+ SDVWS+GV
Sbjct: 168 -----TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 222
Query: 310 VLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+LWEL+T G PY +N + L P CP +M CW + MRPSF
Sbjct: 223 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSF 281
Query: 369 KTILKALNNIVHSEFI 384
++ ++ I S FI
Sbjct: 282 SELVSRISAIF-STFI 296
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 126/256 (49%), Gaps = 23/256 (8%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV-MEYARG 197
+K A+K + D + EG ++ F H N++SL+G+CL+S LV + Y +
Sbjct: 52 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 111
Query: 198 GPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
G L + P V L+ + +Q+A+GM YL A +HRDL + N +L E
Sbjct: 112 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKF--- 165
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAAGTYA------WMAPEVIKTSIFSKASDVWSYGV 309
T+K+ DFGLAR++Y + S WMA E ++T F+ SDVWS+GV
Sbjct: 166 -----TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 220
Query: 310 VLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+LWEL+T G PY +N + L P CP +M CW + MRPSF
Sbjct: 221 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSF 279
Query: 369 KTILKALNNIVHSEFI 384
++ ++ I S FI
Sbjct: 280 SELVSRISAIF-STFI 294
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 126/256 (49%), Gaps = 23/256 (8%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV-MEYARG 197
+K A+K + D + EG ++ F H N++SL+G+CL+S LV + Y +
Sbjct: 56 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 115
Query: 198 GPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
G L + P V L+ + +Q+A+GM YL A +HRDL + N +L E
Sbjct: 116 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKF--- 169
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAAGTYA------WMAPEVIKTSIFSKASDVWSYGV 309
T+K+ DFGLAR++Y + S WMA E ++T F+ SDVWS+GV
Sbjct: 170 -----TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 224
Query: 310 VLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+LWEL+T G PY +N + L P CP +M CW + MRPSF
Sbjct: 225 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSF 283
Query: 369 KTILKALNNIVHSEFI 384
++ ++ I S FI
Sbjct: 284 SELVSRISAIF-STFI 298
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 126/256 (49%), Gaps = 23/256 (8%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV-MEYARG 197
+K A+K + D + EG ++ F H N++SL+G+CL+S LV + Y +
Sbjct: 75 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 134
Query: 198 GPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
G L + P V L+ + +Q+A+GM YL A +HRDL + N +L E
Sbjct: 135 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKF--- 188
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAAGTYA------WMAPEVIKTSIFSKASDVWSYGV 309
T+K+ DFGLAR++Y + S WMA E ++T F+ SDVWS+GV
Sbjct: 189 -----TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 243
Query: 310 VLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+LWEL+T G PY +N + L P CP +M CW + MRPSF
Sbjct: 244 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSF 302
Query: 369 KTILKALNNIVHSEFI 384
++ ++ I S FI
Sbjct: 303 SELVSRISAIF-STFI 317
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 127/256 (49%), Gaps = 23/256 (8%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV-MEYARG 197
+K A+K + D + EG ++ F H N++SL+G+CL+S LV + Y +
Sbjct: 49 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 108
Query: 198 GPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
G L + P V L+ + +Q+A+GM YL A +HRDL + N +L E
Sbjct: 109 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKF--- 162
Query: 256 DLQFKTLKITDFGLAREVYKTTHMS------AAGTYAWMAPEVIKTSIFSKASDVWSYGV 309
T+K+ DFGLAR++Y + S A WMA E ++T F+ SDVWS+GV
Sbjct: 163 -----TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 217
Query: 310 VLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+LWEL+T G PY +N + L P CP +M CW + MRPSF
Sbjct: 218 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSF 276
Query: 369 KTILKALNNIVHSEFI 384
++ ++ I S FI
Sbjct: 277 SELVSRISAIF-STFI 291
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 130/264 (49%), Gaps = 24/264 (9%)
Query: 133 VYKGIYEKQE-----VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK 187
V++GIY E VAIK +++ E QE + FDH +IV LIGV ++P
Sbjct: 26 VHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP- 84
Query: 188 LCLVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSN 245
+ ++ME G L L RK D+ L+ +A Q++ + YL + +HRD+ + N
Sbjct: 85 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARN 141
Query: 246 VLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKAS 302
VL+S +K+ DFGL+R + +T+ A+ WMAPE I F+ AS
Sbjct: 142 VLVSAT--------DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 193
Query: 303 DVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEAD 361
DVW +GV +WE+L G P++ + N LP+P CP +LM CW D
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVK-NNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 252
Query: 362 SHMRPSFKTILKALNNIVHSEFIQ 385
RP F + L+ I+ E +Q
Sbjct: 253 PSRRPRFTELKAQLSTILEEEKLQ 276
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 126/256 (49%), Gaps = 23/256 (8%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV-MEYARG 197
+K A+K + D + EG ++ F H N++SL+G+CL+S LV + Y +
Sbjct: 76 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 135
Query: 198 GPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
G L + P V L+ + +Q+A+GM YL A +HRDL + N +L E
Sbjct: 136 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKF--- 189
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAAGTYA------WMAPEVIKTSIFSKASDVWSYGV 309
T+K+ DFGLAR++Y + S WMA E ++T F+ SDVWS+GV
Sbjct: 190 -----TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 244
Query: 310 VLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+LWEL+T G PY +N + L P CP +M CW + MRPSF
Sbjct: 245 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSF 303
Query: 369 KTILKALNNIVHSEFI 384
++ ++ I S FI
Sbjct: 304 SELVSRISAIF-STFI 318
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 138/263 (52%), Gaps = 31/263 (11%)
Query: 133 VYKGIYEKQEVAIK---VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
VYKG + +VA+K V P P + L+ K E +L H NI+ +G + P+L
Sbjct: 40 VYKGKWHG-DVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLA 95
Query: 190 LVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+V ++ G L L + + ++ L+D A Q A GM+YLH + S+IHRDLKS+N+
Sbjct: 96 IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIF 152
Query: 248 LSEPIENEDLQFKTLKITDFGLAREV--YKTTHM--SAAGTYAWMAPEVIK---TSIFSK 300
L E T+KI DFGLA E + +H +G+ WMAPEVI+ ++ +S
Sbjct: 153 LHED--------NTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 301 ASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP----IPSTCPQLFKTLMEA 356
SDV+++G+VL+EL+TG++PY +IN P + S CP+ K LM
Sbjct: 205 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAE 264
Query: 357 CWEADSHMRPSFKTILKALNNIV 379
C + RPSF IL + +
Sbjct: 265 CLKKKRDERPSFPRILAEIEELA 287
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 138/263 (52%), Gaps = 31/263 (11%)
Query: 133 VYKGIYEKQEVAIK---VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
VYKG + +VA+K V P P + L+ K E +L H NI+ +G +P+L
Sbjct: 40 VYKGKWHG-DVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLA 95
Query: 190 LVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+V ++ G L L + + ++ L+D A Q A GM+YLH + S+IHRDLKS+N+
Sbjct: 96 IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIF 152
Query: 248 LSEPIENEDLQFKTLKITDFGLAREV--YKTTHM--SAAGTYAWMAPEVIK---TSIFSK 300
L E T+KI DFGLA E + +H +G+ WMAPEVI+ ++ +S
Sbjct: 153 LHED--------NTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 301 ASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP----IPSTCPQLFKTLMEA 356
SDV+++G+VL+EL+TG++PY +IN P + S CP+ K LM
Sbjct: 205 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAE 264
Query: 357 CWEADSHMRPSFKTILKALNNIV 379
C + RPSF IL + +
Sbjct: 265 CLKKKRDERPSFPRILAEIEELA 287
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 125/256 (48%), Gaps = 23/256 (8%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV-MEYARG 197
+K A+K + D + EG ++ F H N++SL+G+CL+S LV + Y +
Sbjct: 56 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 115
Query: 198 GPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
G L + P V L+ + +Q+A+GM YL A +HRDL + N +L E
Sbjct: 116 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKF--- 169
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAAGTYA------WMAPEVIKTSIFSKASDVWSYGV 309
T+K+ DFGLAR++Y S WMA E ++T F+ SDVWS+GV
Sbjct: 170 -----TVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 224
Query: 310 VLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+LWEL+T G PY +N + L P CP +M CW + MRPSF
Sbjct: 225 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSF 283
Query: 369 KTILKALNNIVHSEFI 384
++ ++ I S FI
Sbjct: 284 SELVSRISAIF-STFI 298
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 122/257 (47%), Gaps = 36/257 (14%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VA+K D N ++ +E +LL H +IV GVC++ L +V EY + G LN+
Sbjct: 46 VAVKTLKDASD-NARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNK 104
Query: 203 VLAGRKIRPDV----------------LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNV 246
L R PD ++ A QIA GM YL Q +HRDL + N
Sbjct: 105 FL--RAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNC 159
Query: 247 LLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYA----WMAPEVIKTSIFSKAS 302
L+ E + +KI DFG++R+VY T + G WM PE I F+ S
Sbjct: 160 LVGENL--------LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTES 211
Query: 303 DVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEAD 361
DVWS GVVLWE+ T G+ P+ ++ ++ L P TCPQ LM CW+ +
Sbjct: 212 DVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV-LQRPRTCPQEVYELMLGCWQRE 270
Query: 362 SHMRPSFKTILKALNNI 378
HMR + K I L N+
Sbjct: 271 PHMRKNIKGIHTLLQNL 287
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 130/264 (49%), Gaps = 24/264 (9%)
Query: 133 VYKGIYEKQE-----VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK 187
V++GIY E VAIK +++ E QE + FDH +IV LIGV ++P
Sbjct: 26 VHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP- 84
Query: 188 LCLVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSN 245
+ ++ME G L L RK D+ L+ +A Q++ + YL + +HRD+ + N
Sbjct: 85 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARN 141
Query: 246 VLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKAS 302
VL+S +K+ DFGL+R + +T+ A+ WMAPE I F+ AS
Sbjct: 142 VLVSSN--------DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 193
Query: 303 DVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEAD 361
DVW +GV +WE+L G P++ + N LP+P CP +LM CW D
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVK-NNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 252
Query: 362 SHMRPSFKTILKALNNIVHSEFIQ 385
RP F + L+ I+ E +Q
Sbjct: 253 PSRRPRFTELKAQLSTILEEEKLQ 276
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 130/264 (49%), Gaps = 24/264 (9%)
Query: 133 VYKGIYEKQE-----VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK 187
V++GIY E VAIK +++ E QE + FDH +IV LIGV ++P
Sbjct: 26 VHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP- 84
Query: 188 LCLVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSN 245
+ ++ME G L L RK D+ L+ +A Q++ + YL + +HRD+ + N
Sbjct: 85 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARN 141
Query: 246 VLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKAS 302
VL+S +K+ DFGL+R + +T+ A+ WMAPE I F+ AS
Sbjct: 142 VLVSSN--------DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 193
Query: 303 DVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEAD 361
DVW +GV +WE+L G P++ + N LP+P CP +LM CW D
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVK-NNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 252
Query: 362 SHMRPSFKTILKALNNIVHSEFIQ 385
RP F + L+ I+ E +Q
Sbjct: 253 PSRRPRFTELKAQLSTILEEEKLQ 276
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 129/264 (48%), Gaps = 24/264 (9%)
Query: 133 VYKGIYEKQE-----VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK 187
V++GIY E VAIK +++ E QE + FDH +IV LIGV ++P
Sbjct: 26 VHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP- 84
Query: 188 LCLVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSN 245
+ ++ME G L L RK D+ L+ +A Q++ + YL + +HRD+ + N
Sbjct: 85 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARN 141
Query: 246 VLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKAS 302
VL+S +K+ DFGL+R + +T A+ WMAPE I F+ AS
Sbjct: 142 VLVSSN--------DCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSAS 193
Query: 303 DVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEAD 361
DVW +GV +WE+L G P++ + N LP+P CP +LM CW D
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVK-NNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 252
Query: 362 SHMRPSFKTILKALNNIVHSEFIQ 385
RP F + L+ I+ E +Q
Sbjct: 253 PSRRPRFTELKAQLSTILEEEKLQ 276
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 138/263 (52%), Gaps = 31/263 (11%)
Query: 133 VYKGIYEKQEVAIK---VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
VYKG + +VA+K V P P + L+ K E +L H NI+ +G + P+L
Sbjct: 28 VYKGKWHG-DVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLA 83
Query: 190 LVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+V ++ G L L + + ++ L+D A Q A GM+YLH + S+IHRDLKS+N+
Sbjct: 84 IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIF 140
Query: 248 LSEPIENEDLQFKTLKITDFGLA--REVYKTTHM--SAAGTYAWMAPEVIK---TSIFSK 300
L E T+KI DFGLA + + +H +G+ WMAPEVI+ ++ +S
Sbjct: 141 LHED--------NTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 192
Query: 301 ASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP----IPSTCPQLFKTLMEA 356
SDV+++G+VL+EL+TG++PY +IN P + S CP+ K LM
Sbjct: 193 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAE 252
Query: 357 CWEADSHMRPSFKTILKALNNIV 379
C + RPSF IL + +
Sbjct: 253 CLKKKRDERPSFPRILAEIEELA 275
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 133/272 (48%), Gaps = 35/272 (12%)
Query: 133 VYKGIYEKQ-EVAIKVAHPNPDENILENVK--QEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
V KG+ + + E + + N ++ E ++ E ++ F+ ++V L+GV Q
Sbjct: 38 VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 97
Query: 190 LVMEYARGGPLNRVLAGRKIRPDV-------------LVDWAIQIAEGMNYLHCQAPISL 236
++ME G L L R +RP++ ++ A +IA+GM YL+
Sbjct: 98 VIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KF 152
Query: 237 IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEV 292
+HRDL + N +++E T+KI DFG+ R++Y+T + G WM+PE
Sbjct: 153 VHRDLAARNCMVAEDF--------TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 204
Query: 293 IKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFK 351
+K +F+ SDVWS+GVVLWE+ T E PY+ ++ L L P CP +
Sbjct: 205 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL-LDKPDNCPDMLF 263
Query: 352 TLMEACWEADSHMRPSFKTILKALNNIVHSEF 383
LM CW+ + MRPSF I+ ++ + F
Sbjct: 264 ELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 295
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 129/264 (48%), Gaps = 24/264 (9%)
Query: 133 VYKGIYEKQE-----VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK 187
V++GIY E VAIK +++ E QE + FDH +IV LIGV ++P
Sbjct: 28 VHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP- 86
Query: 188 LCLVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSN 245
+ ++ME G L L RK D+ L+ +A Q++ + YL + +HRD+ + N
Sbjct: 87 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARN 143
Query: 246 VLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKAS 302
VL+S +K+ DFGL+R + +T+ A+ WMAPE I F+ AS
Sbjct: 144 VLVSSN--------DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 195
Query: 303 DVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEAD 361
DVW +GV +WE+L G P++ + N LP+P CP +LM CW D
Sbjct: 196 DVWMFGVCMWEILMHGVKPFQGVK-NNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 254
Query: 362 SHMRPSFKTILKALNNIVHSEFIQ 385
RP F + L+ I+ E Q
Sbjct: 255 PSRRPRFTELKAQLSTILEEEKAQ 278
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 133/272 (48%), Gaps = 35/272 (12%)
Query: 133 VYKGIYEKQ-EVAIKVAHPNPDENILENVK--QEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
V KG+ + + E + + N ++ E ++ E ++ F+ ++V L+GV Q
Sbjct: 39 VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 98
Query: 190 LVMEYARGGPLNRVLAGRKIRPDV-------------LVDWAIQIAEGMNYLHCQAPISL 236
++ME G L L R +RP++ ++ A +IA+GM YL+
Sbjct: 99 VIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KF 153
Query: 237 IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEV 292
+HRDL + N +++E T+KI DFG+ R++Y+T + G WM+PE
Sbjct: 154 VHRDLAARNCMVAEDF--------TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 205
Query: 293 IKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFK 351
+K +F+ SDVWS+GVVLWE+ T E PY+ ++ L L P CP +
Sbjct: 206 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL-LDKPDNCPDMLF 264
Query: 352 TLMEACWEADSHMRPSFKTILKALNNIVHSEF 383
LM CW+ + MRPSF I+ ++ + F
Sbjct: 265 ELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 296
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 129/264 (48%), Gaps = 24/264 (9%)
Query: 133 VYKGIYEKQE-----VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK 187
V++GIY E VAIK +++ E QE + FDH +IV LIGV ++P
Sbjct: 29 VHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP- 87
Query: 188 LCLVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSN 245
+ ++ME G L L RK D+ L+ +A Q++ + YL + +HRD+ + N
Sbjct: 88 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARN 144
Query: 246 VLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKAS 302
VL+S +K+ DFGL+R + +T+ A+ WMAPE I F+ AS
Sbjct: 145 VLVSSN--------DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 196
Query: 303 DVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEAD 361
DVW +GV +WE+L G P++ + N LP+P CP +LM CW D
Sbjct: 197 DVWMFGVCMWEILMHGVKPFQGVK-NNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 255
Query: 362 SHMRPSFKTILKALNNIVHSEFIQ 385
RP F + L+ I+ E Q
Sbjct: 256 PSRRPRFTELKAQLSTILEEEKAQ 279
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 133/272 (48%), Gaps = 35/272 (12%)
Query: 133 VYKGIYEKQ-EVAIKVAHPNPDENILENVK--QEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
V KG+ + + E + + N ++ E ++ E ++ F+ ++V L+GV Q
Sbjct: 32 VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 91
Query: 190 LVMEYARGGPLNRVLAGRKIRPDV-------------LVDWAIQIAEGMNYLHCQAPISL 236
++ME G L L R +RP++ ++ A +IA+GM YL+
Sbjct: 92 VIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KF 146
Query: 237 IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEV 292
+HRDL + N +++E T+KI DFG+ R++Y+T + G WM+PE
Sbjct: 147 VHRDLAARNCMVAEDF--------TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 198
Query: 293 IKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFK 351
+K +F+ SDVWS+GVVLWE+ T E PY+ ++ L L P CP +
Sbjct: 199 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL-LDKPDNCPDMLF 257
Query: 352 TLMEACWEADSHMRPSFKTILKALNNIVHSEF 383
LM CW+ + MRPSF I+ ++ + F
Sbjct: 258 ELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 289
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 142/304 (46%), Gaps = 24/304 (7%)
Query: 93 VSSIEDINLVSSVINDVKLVEIDYNKLXXXXXXXXXXXXKVYKGIYEKQE-----VAIKV 147
+ + E++ ++ + + EI ++ V++GIY E VAIK
Sbjct: 14 IPTTENLYFQGAMGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKT 73
Query: 148 AHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGR 207
+++ E QE + FDH +IV LIGV ++P + ++ME G L L R
Sbjct: 74 CKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVR 132
Query: 208 KIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKIT 265
K D+ L+ +A Q++ + YL + +HRD+ + NVL+S +K+
Sbjct: 133 KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSN--------DCVKLG 181
Query: 266 DFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPY 321
DFGL+R + +T+ A+ WMAPE I F+ ASDVW +GV +WE+L G P+
Sbjct: 182 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 241
Query: 322 KSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ + N LP+P CP +LM CW D RP F + L+ I+
Sbjct: 242 QGVK-NNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 300
Query: 382 EFIQ 385
E Q
Sbjct: 301 EKAQ 304
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 133/272 (48%), Gaps = 35/272 (12%)
Query: 133 VYKGIYEKQ-EVAIKVAHPNPDENILENVK--QEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
V KG+ + + E + + N ++ E ++ E ++ F+ ++V L+GV Q
Sbjct: 36 VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 95
Query: 190 LVMEYARGGPLNRVLAGRKIRPDV-------------LVDWAIQIAEGMNYLHCQAPISL 236
++ME G L L R +RP++ ++ A +IA+GM YL+
Sbjct: 96 VIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KF 150
Query: 237 IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEV 292
+HRDL + N +++E T+KI DFG+ R++Y+T + G WM+PE
Sbjct: 151 VHRDLAARNCMVAEDF--------TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 202
Query: 293 IKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFK 351
+K +F+ SDVWS+GVVLWE+ T E PY+ ++ L L P CP +
Sbjct: 203 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL-LDKPDNCPDMLF 261
Query: 352 TLMEACWEADSHMRPSFKTILKALNNIVHSEF 383
LM CW+ + MRPSF I+ ++ + F
Sbjct: 262 ELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 293
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 133/272 (48%), Gaps = 35/272 (12%)
Query: 133 VYKGIYEKQ-EVAIKVAHPNPDENILENVK--QEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
V KG+ + + E + + N ++ E ++ E ++ F+ ++V L+GV Q
Sbjct: 38 VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 97
Query: 190 LVMEYARGGPLNRVLAGRKIRPDV-------------LVDWAIQIAEGMNYLHCQAPISL 236
++ME G L L R +RP++ ++ A +IA+GM YL+
Sbjct: 98 VIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KF 152
Query: 237 IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEV 292
+HRDL + N +++E T+KI DFG+ R++Y+T + G WM+PE
Sbjct: 153 VHRDLAARNCMVAEDF--------TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 204
Query: 293 IKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFK 351
+K +F+ SDVWS+GVVLWE+ T E PY+ ++ L L P CP +
Sbjct: 205 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL-LDKPDNCPDMLF 263
Query: 352 TLMEACWEADSHMRPSFKTILKALNNIVHSEF 383
LM CW+ + MRPSF I+ ++ + F
Sbjct: 264 ELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 295
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 129/264 (48%), Gaps = 24/264 (9%)
Query: 133 VYKGIYEKQE-----VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK 187
V++GIY E VAIK +++ E QE + FDH +IV LIGV ++P
Sbjct: 23 VHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP- 81
Query: 188 LCLVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSN 245
+ ++ME G L L RK D+ L+ +A Q++ + YL + +HRD+ + N
Sbjct: 82 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARN 138
Query: 246 VLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKAS 302
VL+S +K+ DFGL+R + +T+ A+ WMAPE I F+ AS
Sbjct: 139 VLVSSN--------DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 190
Query: 303 DVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEAD 361
DVW +GV +WE+L G P++ + N LP+P CP +LM CW D
Sbjct: 191 DVWMFGVCMWEILMHGVKPFQGVK-NNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 249
Query: 362 SHMRPSFKTILKALNNIVHSEFIQ 385
RP F + L+ I+ E Q
Sbjct: 250 PSRRPRFTELKAQLSTILEEEKAQ 273
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 133/272 (48%), Gaps = 35/272 (12%)
Query: 133 VYKGIYEKQ-EVAIKVAHPNPDENILENVK--QEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
V KG+ + + E + + N ++ E ++ E ++ F+ ++V L+GV Q
Sbjct: 45 VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 104
Query: 190 LVMEYARGGPLNRVLAGRKIRPDV-------------LVDWAIQIAEGMNYLHCQAPISL 236
++ME G L L R +RP++ ++ A +IA+GM YL+
Sbjct: 105 VIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KF 159
Query: 237 IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEV 292
+HRDL + N +++E T+KI DFG+ R++Y+T + G WM+PE
Sbjct: 160 VHRDLAARNCMVAEDF--------TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 211
Query: 293 IKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFK 351
+K +F+ SDVWS+GVVLWE+ T E PY+ ++ L L P CP +
Sbjct: 212 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL-LDKPDNCPDMLF 270
Query: 352 TLMEACWEADSHMRPSFKTILKALNNIVHSEF 383
LM CW+ + MRPSF I+ ++ + F
Sbjct: 271 ELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 302
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 131/264 (49%), Gaps = 35/264 (13%)
Query: 133 VYKGIYEKQ-EVAIKVAHPNPDENILENVK--QEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
V KG+ + + E + + N ++ E ++ E ++ F+ ++V L+GV Q
Sbjct: 67 VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 126
Query: 190 LVMEYARGGPLNRVLAGRKIRPDV-------------LVDWAIQIAEGMNYLHCQAPISL 236
++ME G L L R +RP++ ++ A +IA+GM YL+
Sbjct: 127 VIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KF 181
Query: 237 IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEV 292
+HRDL + N +++E T+KI DFG+ R++Y+T + G WM+PE
Sbjct: 182 VHRDLAARNCMVAEDF--------TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 233
Query: 293 IKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFK 351
+K +F+ SDVWS+GVVLWE+ T E PY+ ++ L L P CP +
Sbjct: 234 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL-LDKPDNCPDMLF 292
Query: 352 TLMEACWEADSHMRPSFKTILKAL 375
LM CW+ + MRPSF I+ ++
Sbjct: 293 ELMRMCWQYNPKMRPSFLEIISSI 316
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 129/264 (48%), Gaps = 24/264 (9%)
Query: 133 VYKGIYEKQE-----VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK 187
V++GIY E VAIK +++ E QE + FDH +IV LIGV ++P
Sbjct: 31 VHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP- 89
Query: 188 LCLVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSN 245
+ ++ME G L L RK D+ L+ +A Q++ + YL + +HRD+ + N
Sbjct: 90 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARN 146
Query: 246 VLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKAS 302
VL+S +K+ DFGL+R + +T+ A+ WMAPE I F+ AS
Sbjct: 147 VLVSSN--------DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 198
Query: 303 DVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEAD 361
DVW +GV +WE+L G P++ + N LP+P CP +LM CW D
Sbjct: 199 DVWMFGVCMWEILMHGVKPFQGVK-NNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYD 257
Query: 362 SHMRPSFKTILKALNNIVHSEFIQ 385
RP F + L+ I+ E Q
Sbjct: 258 PSRRPRFTELKAQLSTILEEEKAQ 281
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 113/216 (52%), Gaps = 15/216 (6%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDV----LVDWAIQIAEGMNY 227
H NIV +G Q P L +V EY G L R+L R + + A +A+GMNY
Sbjct: 93 HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNY 152
Query: 228 LHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT--THMSAAGTY 285
LH + P ++HR+LKS N+L+ + T+K+ DFGL+R T + SAAGT
Sbjct: 153 LHNRNP-PIVHRNLKSPNLLVDKKY--------TVKVCDFGLSRLKASTFLSSKSAAGTP 203
Query: 286 AWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPST 345
WMAPEV++ ++ SDV+S+GV+LWEL T + P+ ++N L IP
Sbjct: 204 EWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRN 263
Query: 346 CPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
++E CW + RPSF TI+ L ++ S
Sbjct: 264 LNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 126/256 (49%), Gaps = 23/256 (8%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV-MEYARG 197
+K A+K + D + EG ++ F H N++SL+G+CL+S LV + Y +
Sbjct: 57 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 116
Query: 198 GPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
G L + P V L+ + +Q+A+GM +L A +HRDL + N +L E
Sbjct: 117 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKF--- 170
Query: 256 DLQFKTLKITDFGLAREVYK----TTHMSAAGTY--AWMAPEVIKTSIFSKASDVWSYGV 309
T+K+ DFGLAR++Y + H WMA E ++T F+ SDVWS+GV
Sbjct: 171 -----TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 225
Query: 310 VLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+LWEL+T G PY +N + L P CP +M CW + MRPSF
Sbjct: 226 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSF 284
Query: 369 KTILKALNNIVHSEFI 384
++ ++ I S FI
Sbjct: 285 SELVSRISAIF-STFI 299
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 127/256 (49%), Gaps = 23/256 (8%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV-MEYARG 197
+K A+K + D + EG ++ F H N++SL+G+CL+S LV + Y +
Sbjct: 57 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 116
Query: 198 GPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
G L + P V L+ + +Q+A+GM +L A +HRDL + N +L E
Sbjct: 117 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKF--- 170
Query: 256 DLQFKTLKITDFGLAREVYK----TTH--MSAAGTYAWMAPEVIKTSIFSKASDVWSYGV 309
T+K+ DFGLAR++Y + H A WMA E ++T F+ SDVWS+GV
Sbjct: 171 -----TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 225
Query: 310 VLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+LWEL+T G PY +N + L P CP +M CW + MRPSF
Sbjct: 226 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSF 284
Query: 369 KTILKALNNIVHSEFI 384
++ ++ I S FI
Sbjct: 285 SELVSRISAIF-STFI 299
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 125/256 (48%), Gaps = 23/256 (8%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV-MEYARG 197
+K A+K + D + EG ++ F H N++SL+G+CL+S LV + Y +
Sbjct: 55 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 114
Query: 198 GPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
G L + P V L+ + +Q+A+GM +L A +HRDL + N +L E
Sbjct: 115 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKF--- 168
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAAGTYA------WMAPEVIKTSIFSKASDVWSYGV 309
T+K+ DFGLAR++Y S WMA E ++T F+ SDVWS+GV
Sbjct: 169 -----TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 223
Query: 310 VLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+LWEL+T G PY +N + L P CP +M CW + MRPSF
Sbjct: 224 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSF 282
Query: 369 KTILKALNNIVHSEFI 384
++ ++ I S FI
Sbjct: 283 SELVSRISAIF-STFI 297
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 142/265 (53%), Gaps = 31/265 (11%)
Query: 133 VYKGIYEKQEVAIK---VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
VYKG + +VA+K V P P + L+ K E +L H NI+ +G + P+L
Sbjct: 52 VYKGKWHG-DVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLA 107
Query: 190 LVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+V ++ G L L + + ++ L+D A Q A+GM+YLH + S+IHRDLKS+N+
Sbjct: 108 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIF 164
Query: 248 LSEPIENEDLQFKTLKITDFGLAREV--YKTTHM--SAAGTYAWMAPEVIKT---SIFSK 300
L +EDL T+KI DFGLA E + +H +G+ WMAPEVI+ + +S
Sbjct: 165 L-----HEDL---TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 301 ASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP----IPSTCPQLFKTLMEA 356
SDV+++G+VL+EL+TG++PY +IN P + S CP+ K LM
Sbjct: 217 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAE 276
Query: 357 CWEADSHMRPSFKTILKALNNIVHS 381
C + RP F IL ++ + S
Sbjct: 277 CLKKKRDERPLFPQILASIELLARS 301
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 124/261 (47%), Gaps = 35/261 (13%)
Query: 142 EVAIKVAHPNPDENILENVKQEGKLLWLFD-HRNIVSLIGVCLQSPKLCLVMEYARGGPL 200
+VA+K+ + E L ++ E +++ + H+NI++L+G C Q L +++EYA G L
Sbjct: 55 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 114
Query: 201 NRVLAGRK-----------------IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKS 243
L R+ + LV A Q+A GM YL A IHRDL +
Sbjct: 115 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 171
Query: 244 SNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFS 299
NVL++E +KI DFGLAR+++ + WMAPE + I++
Sbjct: 172 RNVLVTED--------NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 223
Query: 300 KASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACW 358
SDVWS+GV+LWE+ T G PY + + PS C +M CW
Sbjct: 224 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH-RMDKPSNCTNELYMMMRDCW 282
Query: 359 EADSHMRPSFKTILKALNNIV 379
A RP+FK +++ L+ IV
Sbjct: 283 HAVPSQRPTFKQLVEDLDRIV 303
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 124/261 (47%), Gaps = 35/261 (13%)
Query: 142 EVAIKVAHPNPDENILENVKQEGKLLWLFD-HRNIVSLIGVCLQSPKLCLVMEYARGGPL 200
+VA+K+ + E L ++ E +++ + H+NI++L+G C Q L +++EYA G L
Sbjct: 51 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 110
Query: 201 NRVLAGRK-----------------IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKS 243
L R+ + LV A Q+A GM YL A IHRDL +
Sbjct: 111 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 167
Query: 244 SNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFS 299
NVL++E +KI DFGLAR+++ + WMAPE + I++
Sbjct: 168 RNVLVTED--------NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 219
Query: 300 KASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACW 358
SDVWS+GV+LWE+ T G PY + + PS C +M CW
Sbjct: 220 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH-RMDKPSNCTNELYMMMRDCW 278
Query: 359 EADSHMRPSFKTILKALNNIV 379
A RP+FK +++ L+ IV
Sbjct: 279 HAVPSQRPTFKQLVEDLDRIV 299
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 127/256 (49%), Gaps = 23/256 (8%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV-MEYARG 197
+K A+K + D + EG ++ F H N++SL+G+CL+S LV + Y +
Sbjct: 62 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 121
Query: 198 GPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
G L + P V L+ + +Q+A+GM +L A +HRDL + N +L E
Sbjct: 122 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKF--- 175
Query: 256 DLQFKTLKITDFGLAREVYK----TTH--MSAAGTYAWMAPEVIKTSIFSKASDVWSYGV 309
T+K+ DFGLAR++Y + H A WMA E ++T F+ SDVWS+GV
Sbjct: 176 -----TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 230
Query: 310 VLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+LWEL+T G PY +N + L P CP +M CW + MRPSF
Sbjct: 231 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSF 289
Query: 369 KTILKALNNIVHSEFI 384
++ ++ I S FI
Sbjct: 290 SELVSRISAIF-STFI 304
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 126/256 (49%), Gaps = 23/256 (8%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV-MEYARG 197
+K A+K + D + EG ++ F H N++SL+G+CL+S LV + Y +
Sbjct: 58 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 117
Query: 198 GPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
G L + P V L+ + +Q+A+GM +L A +HRDL + N +L E
Sbjct: 118 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKF--- 171
Query: 256 DLQFKTLKITDFGLAREVYK----TTHMSAAGTY--AWMAPEVIKTSIFSKASDVWSYGV 309
T+K+ DFGLAR++Y + H WMA E ++T F+ SDVWS+GV
Sbjct: 172 -----TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 226
Query: 310 VLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+LWEL+T G PY +N + L P CP +M CW + MRPSF
Sbjct: 227 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSF 285
Query: 369 KTILKALNNIVHSEFI 384
++ ++ I S FI
Sbjct: 286 SELVSRISAIF-STFI 300
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 130/261 (49%), Gaps = 25/261 (9%)
Query: 133 VYKGIY---EKQ-EVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL 188
V +G+Y +KQ +VAIKV ++ E + +E +++ D+ IV LIGVC Q+ L
Sbjct: 26 VRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEAL 84
Query: 189 CLVMEYARGGPLNRVLAGRK--IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNV 246
LVME A GGPL++ L G++ I + + Q++ GM YL + + +HRDL + NV
Sbjct: 85 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNV 141
Query: 247 LLSEPIENEDLQFKTLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVIKTSIFSKA 301
LL + KI+DFGL++ + Y T + W APE I FS
Sbjct: 142 LL--------VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSR 193
Query: 302 SDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEA 360
SDVWSYGV +WE L+ G+ PYK + K + P CP LM CW
Sbjct: 194 SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK-RMECPPECPPELYALMSDCWIY 252
Query: 361 DSHMRPSFKTILKALNNIVHS 381
RP F T+ + + +S
Sbjct: 253 KWEDRPDFLTVEQRMRACYYS 273
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 124/261 (47%), Gaps = 35/261 (13%)
Query: 142 EVAIKVAHPNPDENILENVKQEGKLLWLFD-HRNIVSLIGVCLQSPKLCLVMEYARGGPL 200
+VA+K+ + E L ++ E +++ + H+NI++L+G C Q L +++EYA G L
Sbjct: 54 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 113
Query: 201 NRVLAGRK-----------------IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKS 243
L R+ + LV A Q+A GM YL A IHRDL +
Sbjct: 114 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 170
Query: 244 SNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFS 299
NVL++E +KI DFGLAR+++ + WMAPE + I++
Sbjct: 171 RNVLVTED--------NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 222
Query: 300 KASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACW 358
SDVWS+GV+LWE+ T G PY + + PS C +M CW
Sbjct: 223 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH-RMDKPSNCTNELYMMMRDCW 281
Query: 359 EADSHMRPSFKTILKALNNIV 379
A RP+FK +++ L+ IV
Sbjct: 282 HAVPSQRPTFKQLVEDLDRIV 302
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 124/261 (47%), Gaps = 35/261 (13%)
Query: 142 EVAIKVAHPNPDENILENVKQEGKLLWLFD-HRNIVSLIGVCLQSPKLCLVMEYARGGPL 200
+VA+K+ + E L ++ E +++ + H+NI++L+G C Q L +++EYA G L
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 201 NRVLAGRK-----------------IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKS 243
L R+ + LV A Q+A GM YL A IHRDL +
Sbjct: 122 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 244 SNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFS 299
NVL++E +KI DFGLAR+++ + WMAPE + I++
Sbjct: 179 RNVLVTED--------NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 300 KASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACW 358
SDVWS+GV+LWE+ T G PY + + PS C +M CW
Sbjct: 231 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH-RMDKPSNCTNELYMMMRDCW 289
Query: 359 EADSHMRPSFKTILKALNNIV 379
A RP+FK +++ L+ IV
Sbjct: 290 HAVPSQRPTFKQLVEDLDRIV 310
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 127/256 (49%), Gaps = 23/256 (8%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV-MEYARG 197
+K A+K + D + EG ++ F H N++SL+G+CL+S LV + Y +
Sbjct: 116 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 175
Query: 198 GPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
G L + P V L+ + +Q+A+GM +L A +HRDL + N +L E
Sbjct: 176 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKF--- 229
Query: 256 DLQFKTLKITDFGLAREVYK----TTH--MSAAGTYAWMAPEVIKTSIFSKASDVWSYGV 309
T+K+ DFGLAR++Y + H A WMA E ++T F+ SDVWS+GV
Sbjct: 230 -----TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 284
Query: 310 VLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+LWEL+T G PY +N + L P CP +M CW + MRPSF
Sbjct: 285 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSF 343
Query: 369 KTILKALNNIVHSEFI 384
++ ++ I S FI
Sbjct: 344 SELVSRISAIF-STFI 358
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 132/272 (48%), Gaps = 35/272 (12%)
Query: 133 VYKGIYEKQ-EVAIKVAHPNPDENILENVK--QEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
V KG+ + + E + + N ++ E ++ E ++ F+ ++V L+GV Q
Sbjct: 35 VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 94
Query: 190 LVMEYARGGPLNRVLAGRKIRPDV-------------LVDWAIQIAEGMNYLHCQAPISL 236
++ME G L L R +RP + ++ A +IA+GM YL+
Sbjct: 95 VIMELMTRGDLKSYL--RSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KF 149
Query: 237 IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEV 292
+HRDL + N +++E T+KI DFG+ R++Y+T + G WM+PE
Sbjct: 150 VHRDLAARNCMVAEDF--------TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 201
Query: 293 IKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFK 351
+K +F+ SDVWS+GVVLWE+ T E PY+ ++ L L P CP +
Sbjct: 202 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL-LDKPDNCPDMLF 260
Query: 352 TLMEACWEADSHMRPSFKTILKALNNIVHSEF 383
LM CW+ + MRPSF I+ ++ + F
Sbjct: 261 ELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 292
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 132/272 (48%), Gaps = 35/272 (12%)
Query: 133 VYKGIYEKQ-EVAIKVAHPNPDENILENVK--QEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
V KG+ + + E + + N ++ E ++ E ++ F+ ++V L+GV Q
Sbjct: 45 VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 104
Query: 190 LVMEYARGGPLNRVLAGRKIRPDV-------------LVDWAIQIAEGMNYLHCQAPISL 236
++ME G L L R +RP + ++ A +IA+GM YL+
Sbjct: 105 VIMELMTRGDLKSYL--RSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KF 159
Query: 237 IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEV 292
+HRDL + N +++E T+KI DFG+ R++Y+T + G WM+PE
Sbjct: 160 VHRDLAARNCMVAEDF--------TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 211
Query: 293 IKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFK 351
+K +F+ SDVWS+GVVLWE+ T E PY+ ++ L L P CP +
Sbjct: 212 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL-LDKPDNCPDMLF 270
Query: 352 TLMEACWEADSHMRPSFKTILKALNNIVHSEF 383
LM CW+ + MRPSF I+ ++ + F
Sbjct: 271 ELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 302
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 142/265 (53%), Gaps = 31/265 (11%)
Query: 133 VYKGIYEKQEVAIK---VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
VYKG + +VA+K V P P + L+ K E +L H NI+ +G + P+L
Sbjct: 44 VYKGKWHG-DVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLA 99
Query: 190 LVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+V ++ G L L + + ++ L+D A Q A+GM+YLH + S+IHRDLKS+N+
Sbjct: 100 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIF 156
Query: 248 LSEPIENEDLQFKTLKITDFGLAREV--YKTTHM--SAAGTYAWMAPEVIKT---SIFSK 300
L +EDL T+KI DFGLA E + +H +G+ WMAPEVI+ + +S
Sbjct: 157 L-----HEDL---TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 208
Query: 301 ASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP----IPSTCPQLFKTLMEA 356
SDV+++G+VL+EL+TG++PY +IN P + S CP+ K LM
Sbjct: 209 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAE 268
Query: 357 CWEADSHMRPSFKTILKALNNIVHS 381
C + RP F IL ++ + S
Sbjct: 269 CLKKKRDERPLFPQILASIELLARS 293
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 132/272 (48%), Gaps = 35/272 (12%)
Query: 133 VYKGIYEKQ-EVAIKVAHPNPDENILENVK--QEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
V KG+ + + E + + N ++ E ++ E ++ F+ ++V L+GV Q
Sbjct: 32 VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 91
Query: 190 LVMEYARGGPLNRVLAGRKIRPDV-------------LVDWAIQIAEGMNYLHCQAPISL 236
++ME G L L R +RP++ ++ A +IA+GM YL+
Sbjct: 92 VIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KF 146
Query: 237 IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEV 292
+HRDL + N ++E T+KI DFG+ R++Y+T + G WM+PE
Sbjct: 147 VHRDLAARNCXVAEDF--------TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 198
Query: 293 IKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFK 351
+K +F+ SDVWS+GVVLWE+ T E PY+ ++ L L P CP +
Sbjct: 199 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL-LDKPDNCPDMLL 257
Query: 352 TLMEACWEADSHMRPSFKTILKALNNIVHSEF 383
LM CW+ + MRPSF I+ ++ + F
Sbjct: 258 ELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 289
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 124/261 (47%), Gaps = 35/261 (13%)
Query: 142 EVAIKVAHPNPDENILENVKQEGKLLWLFD-HRNIVSLIGVCLQSPKLCLVMEYARGGPL 200
+VA+K+ + E L ++ E +++ + H+NI++L+G C Q L +++EYA G L
Sbjct: 47 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 106
Query: 201 NRVLAGRK-----------------IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKS 243
L R+ + LV A Q+A GM YL A IHRDL +
Sbjct: 107 REYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 163
Query: 244 SNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFS 299
NVL++E +KI DFGLAR+++ + WMAPE + I++
Sbjct: 164 RNVLVTED--------NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 215
Query: 300 KASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACW 358
SDVWS+GV+LWE+ T G PY + + PS C +M CW
Sbjct: 216 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH-RMDKPSNCTNELYMMMRDCW 274
Query: 359 EADSHMRPSFKTILKALNNIV 379
A RP+FK +++ L+ IV
Sbjct: 275 HAVPSQRPTFKQLVEDLDRIV 295
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 124/261 (47%), Gaps = 35/261 (13%)
Query: 142 EVAIKVAHPNPDENILENVKQEGKLLWLFD-HRNIVSLIGVCLQSPKLCLVMEYARGGPL 200
+VA+K+ + E L ++ E +++ + H+NI++L+G C Q L +++EYA G L
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 201 NRVLAGR-----------------KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKS 243
L R ++ LV A Q+A GM YL A IHRDL +
Sbjct: 122 REYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 244 SNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFS 299
NVL++E +KI DFGLAR+++ + WMAPE + I++
Sbjct: 179 RNVLVTED--------NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 300 KASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACW 358
SDVWS+GV+LWE+ T G PY + + PS C +M CW
Sbjct: 231 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH-RMDKPSNCTNELYMMMRDCW 289
Query: 359 EADSHMRPSFKTILKALNNIV 379
A RP+FK +++ L+ IV
Sbjct: 290 HAVPSQRPTFKQLVEDLDRIV 310
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 124/261 (47%), Gaps = 35/261 (13%)
Query: 142 EVAIKVAHPNPDENILENVKQEGKLLWLFD-HRNIVSLIGVCLQSPKLCLVMEYARGGPL 200
+VA+K+ + E L ++ E +++ + H+NI++L+G C Q L +++EYA G L
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 201 NRVLAGRK-----------------IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKS 243
L R+ + LV A Q+A GM YL A IHRDL +
Sbjct: 122 REYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 244 SNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFS 299
NVL++E +KI DFGLAR+++ + WMAPE + I++
Sbjct: 179 RNVLVTED--------NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 300 KASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACW 358
SDVWS+GV+LWE+ T G PY + + PS C +M CW
Sbjct: 231 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH-RMDKPSNCTNELYMMMRDCW 289
Query: 359 EADSHMRPSFKTILKALNNIV 379
A RP+FK +++ L+ IV
Sbjct: 290 HAVPSQRPTFKQLVEDLDRIV 310
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 124/264 (46%), Gaps = 34/264 (12%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+K VA+K A E+ ++ ++E +LL + H++IV GVC + L +V EY R G
Sbjct: 70 DKMLVAVK-ALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 128
Query: 199 PLNRVL-----------AGRKIRP-----DVLVDWAIQIAEGMNYLHCQAPISLIHRDLK 242
LNR L G + P L+ A Q+A GM YL A + +HRDL
Sbjct: 129 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLA 185
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYA----WMAPEVIKTSIF 298
+ N L+ + + +KI DFG++R++Y T + G WM PE I F
Sbjct: 186 TRNCLVGQGL--------VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKF 237
Query: 299 SKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEAC 357
+ SDVWS+GVVLWE+ T G+ P+ ++ + L P CP +M C
Sbjct: 238 TTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGR-ELERPRACPPEVYAIMRGC 296
Query: 358 WEADSHMRPSFKTILKALNNIVHS 381
W+ + R S K + L + +
Sbjct: 297 WQREPQQRHSIKDVHARLQALAQA 320
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 135/284 (47%), Gaps = 42/284 (14%)
Query: 133 VYKG-----IYEKQEVAIKVAHPNPDENILENVK--QEGKLLWLFDHRNIVSLIGVCLQS 185
VY+G I + E + V N ++ E ++ E ++ F ++V L+GV +
Sbjct: 32 VYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 91
Query: 186 PKLCLVMEYARGGPLNRVLAGRKIRPDV-------------LVDWAIQIAEGMNYLHCQA 232
+VME G L L R +RP+ ++ A +IA+GM YL+ +
Sbjct: 92 QPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK- 148
Query: 233 PISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWM 288
+HRDL + N +++ T+KI DFG+ R++Y+T + G WM
Sbjct: 149 --KFVHRDLAARNCMVAHDF--------TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 289 APEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCP 347
APE +K +F+ +SD+WS+GVVLWE+ + E PY+ ++ L P CP
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY-LDQPDNCP 257
Query: 348 QLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESF 391
+ LM CW+ + MRP+F I+ L + +H F P SF
Sbjct: 258 ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSF---PEVSF 298
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 124/264 (46%), Gaps = 34/264 (12%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+K VA+K A E+ ++ ++E +LL + H++IV GVC + L +V EY R G
Sbjct: 47 DKMLVAVK-ALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 105
Query: 199 PLNRVL-----------AGRKIRP-----DVLVDWAIQIAEGMNYLHCQAPISLIHRDLK 242
LNR L G + P L+ A Q+A GM YL A + +HRDL
Sbjct: 106 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLA 162
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYA----WMAPEVIKTSIF 298
+ N L+ + + +KI DFG++R++Y T + G WM PE I F
Sbjct: 163 TRNCLVGQGL--------VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKF 214
Query: 299 SKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEAC 357
+ SDVWS+GVVLWE+ T G+ P+ ++ + L P CP +M C
Sbjct: 215 TTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGR-ELERPRACPPEVYAIMRGC 273
Query: 358 WEADSHMRPSFKTILKALNNIVHS 381
W+ + R S K + L + +
Sbjct: 274 WQREPQQRHSIKDVHARLQALAQA 297
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 142/265 (53%), Gaps = 31/265 (11%)
Query: 133 VYKGIYEKQEVAIK---VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
VYKG + +VA+K V P P + L+ K E +L H NI+ +G + P+L
Sbjct: 51 VYKGKWHG-DVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLA 106
Query: 190 LVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+V ++ G L L + + ++ L+D A Q A+GM+YLH + S+IHRDLKS+N+
Sbjct: 107 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIF 163
Query: 248 LSEPIENEDLQFKTLKITDFGLA--REVYKTTHM--SAAGTYAWMAPEVIKT---SIFSK 300
L +EDL T+KI DFGLA + + +H +G+ WMAPEVI+ + +S
Sbjct: 164 L-----HEDL---TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 215
Query: 301 ASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP----IPSTCPQLFKTLMEA 356
SDV+++G+VL+EL+TG++PY +IN P + S CP+ K LM
Sbjct: 216 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAE 275
Query: 357 CWEADSHMRPSFKTILKALNNIVHS 381
C + RP F IL ++ + S
Sbjct: 276 CLKKKRDERPLFPQILASIELLARS 300
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 142/265 (53%), Gaps = 31/265 (11%)
Query: 133 VYKGIYEKQEVAIK---VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
VYKG + +VA+K V P P + L+ K E +L H NI+ +G + P+L
Sbjct: 52 VYKGKWHG-DVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLA 107
Query: 190 LVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+V ++ G L L + + ++ L+D A Q A+GM+YLH + S+IHRDLKS+N+
Sbjct: 108 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIF 164
Query: 248 LSEPIENEDLQFKTLKITDFGLA--REVYKTTHM--SAAGTYAWMAPEVIKT---SIFSK 300
L +EDL T+KI DFGLA + + +H +G+ WMAPEVI+ + +S
Sbjct: 165 L-----HEDL---TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 301 ASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP----IPSTCPQLFKTLMEA 356
SDV+++G+VL+EL+TG++PY +IN P + S CP+ K LM
Sbjct: 217 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAE 276
Query: 357 CWEADSHMRPSFKTILKALNNIVHS 381
C + RP F IL ++ + S
Sbjct: 277 CLKKKRDERPLFPQILASIELLARS 301
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 142/265 (53%), Gaps = 31/265 (11%)
Query: 133 VYKGIYEKQEVAIK---VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
VYKG + +VA+K V P P + L+ K E +L H NI+ +G + P+L
Sbjct: 24 VYKGKWHG-DVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLA 79
Query: 190 LVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+V ++ G L L + + ++ L+D A Q A+GM+YLH + S+IHRDLKS+N+
Sbjct: 80 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIF 136
Query: 248 LSEPIENEDLQFKTLKITDFGLAREV--YKTTHM--SAAGTYAWMAPEVIKT---SIFSK 300
L +EDL T+KI DFGLA E + +H +G+ WMAPEVI+ + +S
Sbjct: 137 L-----HEDL---TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 301 ASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP----IPSTCPQLFKTLMEA 356
SDV+++G+VL+EL+TG++PY +IN P + S CP+ K LM
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAE 248
Query: 357 CWEADSHMRPSFKTILKALNNIVHS 381
C + RP F IL ++ + S
Sbjct: 249 CLKKKRDERPLFPQILASIELLARS 273
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 127/263 (48%), Gaps = 39/263 (14%)
Query: 142 EVAIKVAHPNPDENILENVKQEGKLLWLFD-HRNIVSLIGVCLQSPKLCLVMEYARGGPL 200
+VA+K+ + E L ++ E +++ + H+NI++L+G C Q L +++EYA G L
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 201 NRVLAGRK-----------------IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKS 243
L R+ + LV A Q+A GM YL A IHRDL +
Sbjct: 122 REYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 244 SNVLLSEPIENEDLQFKTLKITDFGLAREVY------KTTHMSAAGTYAWMAPEVIKTSI 297
NVL++E +KI DFGLAR+++ KTT+ WMAPE + I
Sbjct: 179 RNVLVTED--------NVMKIADFGLARDIHHIDXXKKTTN--GRLPVKWMAPEALFDRI 228
Query: 298 FSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEA 356
++ SDVWS+GV+LWE+ T G PY + + PS C +M
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH-RMDKPSNCTNELYMMMRD 287
Query: 357 CWEADSHMRPSFKTILKALNNIV 379
CW A RP+FK +++ L+ IV
Sbjct: 288 CWHAVPSQRPTFKQLVEDLDRIV 310
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 124/261 (47%), Gaps = 35/261 (13%)
Query: 142 EVAIKVAHPNPDENILENVKQEGKLLWLFD-HRNIVSLIGVCLQSPKLCLVMEYARGGPL 200
+VA+K+ + E L ++ E +++ + H+NI++L+G C Q L +++EYA G L
Sbjct: 103 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 162
Query: 201 NRVLAGRK-----------------IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKS 243
L R+ + LV A Q+A GM YL A IHRDL +
Sbjct: 163 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 219
Query: 244 SNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFS 299
NVL++E +KI DFGLAR+++ + WMAPE + I++
Sbjct: 220 RNVLVTED--------NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 271
Query: 300 KASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACW 358
SDVWS+GV+LWE+ T G PY + + PS C +M CW
Sbjct: 272 HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH-RMDKPSNCTNELYMMMRDCW 330
Query: 359 EADSHMRPSFKTILKALNNIV 379
A RP+FK +++ L+ IV
Sbjct: 331 HAVPSQRPTFKQLVEDLDRIV 351
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 135/284 (47%), Gaps = 42/284 (14%)
Query: 133 VYKG-----IYEKQEVAIKVAHPNPDENILENVK--QEGKLLWLFDHRNIVSLIGVCLQS 185
VY+G I + E + V N ++ E ++ E ++ F ++V L+GV +
Sbjct: 33 VYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 92
Query: 186 PKLCLVMEYARGGPLNRVLAGRKIRPDV-------------LVDWAIQIAEGMNYLHCQA 232
+VME G L L R +RP+ ++ A +IA+GM YL+ +
Sbjct: 93 QPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK- 149
Query: 233 PISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWM 288
+HRDL + N +++ T+KI DFG+ R++Y+T + G WM
Sbjct: 150 --KFVHRDLAARNCMVAHDF--------TVKIGDFGMTRDIYETAYYRKGGKGLLPVRWM 199
Query: 289 APEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCP 347
APE +K +F+ +SD+WS+GVVLWE+ + E PY+ ++ L P CP
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY-LDQPDNCP 258
Query: 348 QLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESF 391
+ LM CW+ + MRP+F I+ L + +H F P SF
Sbjct: 259 ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSF---PEVSF 299
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 124/264 (46%), Gaps = 34/264 (12%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+K VA+K A E+ ++ ++E +LL + H++IV GVC + L +V EY R G
Sbjct: 41 DKMLVAVK-ALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 99
Query: 199 PLNRVL-----------AGRKIRP-----DVLVDWAIQIAEGMNYLHCQAPISLIHRDLK 242
LNR L G + P L+ A Q+A GM YL A + +HRDL
Sbjct: 100 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLA 156
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYA----WMAPEVIKTSIF 298
+ N L+ + + +KI DFG++R++Y T + G WM PE I F
Sbjct: 157 TRNCLVGQGL--------VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKF 208
Query: 299 SKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEAC 357
+ SDVWS+GVVLWE+ T G+ P+ ++ + L P CP +M C
Sbjct: 209 TTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGR-ELERPRACPPEVYAIMRGC 267
Query: 358 WEADSHMRPSFKTILKALNNIVHS 381
W+ + R S K + L + +
Sbjct: 268 WQREPQQRHSIKDVHARLQALAQA 291
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 111/216 (51%), Gaps = 15/216 (6%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDV----LVDWAIQIAEGMNY 227
H NIV +G Q P L +V EY G L R+L R + + A +A+GMNY
Sbjct: 93 HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNY 152
Query: 228 LHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS--AAGTY 285
LH + P ++HRDLKS N+L+ + T+K+ DFGL+R S AAGT
Sbjct: 153 LHNRNP-PIVHRDLKSPNLLVDKKY--------TVKVCDFGLSRLKASXFLXSKXAAGTP 203
Query: 286 AWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPST 345
WMAPEV++ ++ SDV+S+GV+LWEL T + P+ ++N L IP
Sbjct: 204 EWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRN 263
Query: 346 CPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
++E CW + RPSF TI+ L ++ S
Sbjct: 264 LNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 135/284 (47%), Gaps = 42/284 (14%)
Query: 133 VYKG-----IYEKQEVAIKVAHPNPDENILENVK--QEGKLLWLFDHRNIVSLIGVCLQS 185
VY+G I + E + V N ++ E ++ E ++ F ++V L+GV +
Sbjct: 33 VYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 92
Query: 186 PKLCLVMEYARGGPLNRVLAGRKIRPDV-------------LVDWAIQIAEGMNYLHCQA 232
+VME G L L R +RP+ ++ A +IA+GM YL+ +
Sbjct: 93 QPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK- 149
Query: 233 PISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWM 288
+HRDL + N +++ T+KI DFG+ R++Y+T + G WM
Sbjct: 150 --KFVHRDLAARNCMVAHDF--------TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 289 APEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCP 347
APE +K +F+ +SD+WS+GVVLWE+ + E PY+ ++ L P CP
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY-LDQPDNCP 258
Query: 348 QLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESF 391
+ LM CW+ + MRP+F I+ L + +H F P SF
Sbjct: 259 ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSF---PEVSF 299
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 127/256 (49%), Gaps = 23/256 (8%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV-MEYARG 197
+K A+K + D + EG ++ F H N++SL+G+CL+S LV + Y +
Sbjct: 58 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 117
Query: 198 GPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
G L + P V L+ + +Q+A+GM +L A +HRDL + N +L E
Sbjct: 118 GDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKF--- 171
Query: 256 DLQFKTLKITDFGLAREV----YKTTH--MSAAGTYAWMAPEVIKTSIFSKASDVWSYGV 309
T+K+ DFGLAR++ + + H A WMA E ++T F+ SDVWS+GV
Sbjct: 172 -----TVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 226
Query: 310 VLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+LWEL+T G PY +N + L P CP +M CW + MRPSF
Sbjct: 227 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSF 285
Query: 369 KTILKALNNIVHSEFI 384
++ ++ I S FI
Sbjct: 286 SELVSRISAIF-STFI 300
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 142/265 (53%), Gaps = 31/265 (11%)
Query: 133 VYKGIYEKQEVAIK---VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
VYKG + +VA+K V P P + L+ K E +L H NI+ +G +P+L
Sbjct: 24 VYKGKWHG-DVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLA 79
Query: 190 LVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+V ++ G L L + + ++ L+D A Q A+GM+YLH + S+IHRDLKS+N+
Sbjct: 80 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIF 136
Query: 248 LSEPIENEDLQFKTLKITDFGLA--REVYKTTHM--SAAGTYAWMAPEVIKT---SIFSK 300
L +EDL T+KI DFGLA + + +H +G+ WMAPEVI+ + +S
Sbjct: 137 L-----HEDL---TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 301 ASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP----IPSTCPQLFKTLMEA 356
SDV+++G+VL+EL+TG++PY +IN P + S CP+ K LM
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAE 248
Query: 357 CWEADSHMRPSFKTILKALNNIVHS 381
C + RP F IL ++ + S
Sbjct: 249 CLKKKRDERPLFPQILASIELLARS 273
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 142/265 (53%), Gaps = 31/265 (11%)
Query: 133 VYKGIYEKQEVAIK---VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
VYKG + +VA+K V P P + L+ K E +L H NI+ +G + P+L
Sbjct: 26 VYKGKWHG-DVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLA 81
Query: 190 LVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+V ++ G L L + + ++ L+D A Q A+GM+YLH + S+IHRDLKS+N+
Sbjct: 82 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIF 138
Query: 248 LSEPIENEDLQFKTLKITDFGLA--REVYKTTHM--SAAGTYAWMAPEVIKT---SIFSK 300
L +EDL T+KI DFGLA + + +H +G+ WMAPEVI+ + +S
Sbjct: 139 L-----HEDL---TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 190
Query: 301 ASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP----IPSTCPQLFKTLMEA 356
SDV+++G+VL+EL+TG++PY +IN P + S CP+ K LM
Sbjct: 191 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAE 250
Query: 357 CWEADSHMRPSFKTILKALNNIVHS 381
C + RP F IL ++ + S
Sbjct: 251 CLKKKRDERPLFPQILASIELLARS 275
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 142/265 (53%), Gaps = 31/265 (11%)
Query: 133 VYKGIYEKQEVAIK---VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
VYKG + +VA+K V P P + L+ K E +L H NI+ +G + P+L
Sbjct: 29 VYKGKWHG-DVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLA 84
Query: 190 LVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+V ++ G L L + + ++ L+D A Q A+GM+YLH + S+IHRDLKS+N+
Sbjct: 85 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIF 141
Query: 248 LSEPIENEDLQFKTLKITDFGLA--REVYKTTHM--SAAGTYAWMAPEVIKT---SIFSK 300
L +EDL T+KI DFGLA + + +H +G+ WMAPEVI+ + +S
Sbjct: 142 L-----HEDL---TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 301 ASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP----IPSTCPQLFKTLMEA 356
SDV+++G+VL+EL+TG++PY +IN P + S CP+ K LM
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAE 253
Query: 357 CWEADSHMRPSFKTILKALNNIVHS 381
C + RP F IL ++ + S
Sbjct: 254 CLKKKRDERPLFPQILASIELLARS 278
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 142/265 (53%), Gaps = 31/265 (11%)
Query: 133 VYKGIYEKQEVAIK---VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
VYKG + +VA+K V P P + L+ K E +L H NI+ +G + P+L
Sbjct: 24 VYKGKWHG-DVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLA 79
Query: 190 LVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+V ++ G L L + + ++ L+D A Q A+GM+YLH + S+IHRDLKS+N+
Sbjct: 80 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIF 136
Query: 248 LSEPIENEDLQFKTLKITDFGLA--REVYKTTHM--SAAGTYAWMAPEVIKT---SIFSK 300
L +EDL T+KI DFGLA + + +H +G+ WMAPEVI+ + +S
Sbjct: 137 L-----HEDL---TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 301 ASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP----IPSTCPQLFKTLMEA 356
SDV+++G+VL+EL+TG++PY +IN P + S CP+ K LM
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAE 248
Query: 357 CWEADSHMRPSFKTILKALNNIVHS 381
C + RP F IL ++ + S
Sbjct: 249 CLKKKRDERPLFPQILASIELLARS 273
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 142/265 (53%), Gaps = 31/265 (11%)
Query: 133 VYKGIYEKQEVAIK---VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
VYKG + +VA+K V P P + L+ K E +L H NI+ +G + P+L
Sbjct: 29 VYKGKWHG-DVAVKMLNVTAPTPQQ--LQAFKNEVGVLRKTRHVNILLFMGYSTK-PQLA 84
Query: 190 LVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+V ++ G L L + + ++ L+D A Q A+GM+YLH + S+IHRDLKS+N+
Sbjct: 85 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIF 141
Query: 248 LSEPIENEDLQFKTLKITDFGLA--REVYKTTHM--SAAGTYAWMAPEVIKT---SIFSK 300
L +EDL T+KI DFGLA + + +H +G+ WMAPEVI+ + +S
Sbjct: 142 L-----HEDL---TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 301 ASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP----IPSTCPQLFKTLMEA 356
SDV+++G+VL+EL+TG++PY +IN P + S CP+ K LM
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAE 253
Query: 357 CWEADSHMRPSFKTILKALNNIVHS 381
C + RP F IL ++ + S
Sbjct: 254 CLKKKRDERPLFPQILASIELLARS 278
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 130/261 (49%), Gaps = 25/261 (9%)
Query: 133 VYKGIY---EKQ-EVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL 188
V +G+Y +KQ +VAIKV ++ E + +E +++ D+ IV LIGVC Q+ L
Sbjct: 352 VRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEAL 410
Query: 189 CLVMEYARGGPLNRVLAGRK--IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNV 246
LVME A GGPL++ L G++ I + + Q++ GM YL + + +HR+L + NV
Sbjct: 411 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNV 467
Query: 247 LLSEPIENEDLQFKTLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVIKTSIFSKA 301
LL + KI+DFGL++ + Y T + W APE I FS
Sbjct: 468 LL--------VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSR 519
Query: 302 SDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEA 360
SDVWSYGV +WE L+ G+ PYK + K + P CP LM CW
Sbjct: 520 SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK-RMECPPECPPELYALMSDCWIY 578
Query: 361 DSHMRPSFKTILKALNNIVHS 381
RP F T+ + + +S
Sbjct: 579 KWEDRPDFLTVEQRMRACYYS 599
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 136/284 (47%), Gaps = 42/284 (14%)
Query: 133 VYKG-----IYEKQEVAIKVAHPNPDENILENVK--QEGKLLWLFDHRNIVSLIGVCLQS 185
VY+G I + E + V N ++ E ++ E ++ F ++V L+GV +
Sbjct: 33 VYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 92
Query: 186 PKLCLVMEYARGGPLNRVLAGRKIRPDV-------------LVDWAIQIAEGMNYLHCQA 232
+VME G L L R +RP+ ++ A +IA+GM YL+ +
Sbjct: 93 QPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK- 149
Query: 233 PISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWM 288
+HR+L + N +++ T+KI DFG+ R++Y+T + G WM
Sbjct: 150 --KFVHRNLAARNCMVAHDF--------TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 289 APEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCP 347
APE +K +F+ +SD+WS+GVVLWE+ + E PY+ ++ L P CP
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY-LDQPDNCP 258
Query: 348 QLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESF 391
+ LM CW+ + +MRP+F I+ L + +H F P SF
Sbjct: 259 ERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSF---PEVSF 299
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 136/284 (47%), Gaps = 42/284 (14%)
Query: 133 VYKG-----IYEKQEVAIKVAHPNPDENILENVK--QEGKLLWLFDHRNIVSLIGVCLQS 185
VY+G I + E + V N ++ E ++ E ++ F ++V L+GV +
Sbjct: 34 VYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 93
Query: 186 PKLCLVMEYARGGPLNRVLAGRKIRPDV-------------LVDWAIQIAEGMNYLHCQA 232
+VME G L L R +RP+ ++ A +IA+GM YL+ +
Sbjct: 94 QPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK- 150
Query: 233 PISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWM 288
+HR+L + N +++ T+KI DFG+ R++Y+T + G WM
Sbjct: 151 --KFVHRNLAARNCMVAHDF--------TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 289 APEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCP 347
APE +K +F+ +SD+WS+GVVLWE+ + E PY+ ++ L P CP
Sbjct: 201 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY-LDQPDNCP 259
Query: 348 QLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESF 391
+ LM CW+ + +MRP+F I+ L + +H F P SF
Sbjct: 260 ERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSF---PEVSF 300
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 131/272 (48%), Gaps = 35/272 (12%)
Query: 133 VYKGIYEKQ-EVAIKVAHPNPDENILENVK--QEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
V KG+ + + E + + N ++ E ++ E ++ F+ ++V L+GV Q
Sbjct: 30 VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 89
Query: 190 LVMEYARGGPLNRVLAGRKIRPDV-------------LVDWAIQIAEGMNYLHCQAPISL 236
++ME G L L R +RP++ ++ A +IA+GM YL+
Sbjct: 90 VIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KF 144
Query: 237 IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEV 292
+HRDL + N +++E T+KI DFG+ R++ +T G WM+PE
Sbjct: 145 VHRDLAARNCMVAEDF--------TVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPES 196
Query: 293 IKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFK 351
+K +F+ SDVWS+GVVLWE+ T E PY+ ++ L L P CP +
Sbjct: 197 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL-LDKPDNCPDMLL 255
Query: 352 TLMEACWEADSHMRPSFKTILKALNNIVHSEF 383
LM CW+ + MRPSF I+ ++ + F
Sbjct: 256 ELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 287
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 131/272 (48%), Gaps = 35/272 (12%)
Query: 133 VYKGIYEKQ-EVAIKVAHPNPDENILENVK--QEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
V KG+ + + E + + N ++ E ++ E ++ F+ ++V L+GV Q
Sbjct: 39 VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 98
Query: 190 LVMEYARGGPLNRVLAGRKIRPDV-------------LVDWAIQIAEGMNYLHCQAPISL 236
++ME G L L R +RP++ ++ A +IA+GM YL+
Sbjct: 99 VIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KF 153
Query: 237 IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEV 292
+HRDL + N +++E T+KI DFG+ R++ +T G WM+PE
Sbjct: 154 VHRDLAARNCMVAEDF--------TVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPES 205
Query: 293 IKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFK 351
+K +F+ SDVWS+GVVLWE+ T E PY+ ++ L L P CP +
Sbjct: 206 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL-LDKPDNCPDMLF 264
Query: 352 TLMEACWEADSHMRPSFKTILKALNNIVHSEF 383
LM CW+ + MRPSF I+ ++ + F
Sbjct: 265 ELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 296
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 124/301 (41%), Gaps = 44/301 (14%)
Query: 110 KLVEIDYNKLXXXXXXXXXXXXKVYKGIY-------EKQEVAIKVAHPNPDENILENVKQ 162
KL EI + + KVYKG + Q VAIK + + E +
Sbjct: 19 KLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 78
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDV--------- 213
E L H N+V L+GV + L ++ Y G L+ L R DV
Sbjct: 79 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 138
Query: 214 --------LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKIT 265
V QIA GM YL ++H+DL + NVL+ + + +KI+
Sbjct: 139 KSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKL--------NVKIS 187
Query: 266 DFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIP 320
D GL REVY + G WMAPE I FS SD+WSYGVVLWE+ + G P
Sbjct: 188 DLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 247
Query: 321 YKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTI---LKALNN 377
Y + N+ LP P CP LM CW RP FK I L+A N
Sbjct: 248 YCGYS-NQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGN 306
Query: 378 I 378
+
Sbjct: 307 L 307
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 122/249 (48%), Gaps = 22/249 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK E + E ++ FDH N++ L GV +S + ++ E+ G L+
Sbjct: 64 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 123
Query: 203 VLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L + V LV IA GM YL A ++ +HRDL + N+L+ N +L
Sbjct: 124 FLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILV-----NSNL--- 172
Query: 261 TLKITDFGLAR----EVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWE 313
K++DFGL+R + T+ SA G W APE I+ F+ ASDVWSYG+V+WE
Sbjct: 173 VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWE 232
Query: 314 LLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTIL 372
+++ GE PY + + LP P CP LM CW+ D + RP F I+
Sbjct: 233 VMSYGERPYWDMTNQDVINAIEQD-YRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIV 291
Query: 373 KALNNIVHS 381
L+ ++ +
Sbjct: 292 NTLDKMIRN 300
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 127/260 (48%), Gaps = 19/260 (7%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV 191
+VY+G+++K + + V D +E +E ++ H N+V L+GVC + P ++
Sbjct: 28 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 192 MEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
+E+ G L R +++ VL+ A QI+ M YL + + IHRDL + N L+
Sbjct: 88 IEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLV 144
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVW 305
E +K+ DFGL+R + T+ + AG W APE + + FS SDVW
Sbjct: 145 GEN--------HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 306 SYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHM 364
++GV+LWE+ T G PY I+ + + P CP+ LM ACW+ +
Sbjct: 197 AFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSD 255
Query: 365 RPSFKTILKALNNIVHSEFI 384
RPSF I +A + I
Sbjct: 256 RPSFAEIHQAFETMFQESSI 275
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 127/260 (48%), Gaps = 19/260 (7%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV 191
+VY+G+++K + + V D +E +E ++ H N+V L+GVC + P ++
Sbjct: 28 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 192 MEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
+E+ G L R +++ VL+ A QI+ M YL + + IHRDL + N L+
Sbjct: 88 IEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLV 144
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVW 305
E +K+ DFGL+R + T+ + AG W APE + + FS SDVW
Sbjct: 145 GEN--------HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 306 SYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHM 364
++GV+LWE+ T G PY I+ + + P CP+ LM ACW+ +
Sbjct: 197 AFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSD 255
Query: 365 RPSFKTILKALNNIVHSEFI 384
RPSF I +A + I
Sbjct: 256 RPSFAEIHQAFETMFQESSI 275
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 126/260 (48%), Gaps = 19/260 (7%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV 191
+VY+G+++K + + V D +E +E ++ H N+V L+GVC + P ++
Sbjct: 33 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 192 MEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
E+ G L R +++ VL+ A QI+ M YL + + IHRDL + N L+
Sbjct: 93 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLV 149
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVW 305
E +K+ DFGL+R + T+ + AG W APE + + FS SDVW
Sbjct: 150 GEN--------HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 306 SYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHM 364
++GV+LWE+ T G PY I+ + + P CP+ LM ACW+ +
Sbjct: 202 AFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSD 260
Query: 365 RPSFKTILKALNNIVHSEFI 384
RPSF I +A + I
Sbjct: 261 RPSFAEIHQAFETMFQESSI 280
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 126/260 (48%), Gaps = 19/260 (7%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV 191
+VY+G+++K + + V D +E +E ++ H N+V L+GVC + P ++
Sbjct: 29 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 88
Query: 192 MEYARGGPL---NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
E+ G L R +++ VL+ A QI+ M YL + + IHRDL + N L+
Sbjct: 89 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLV 145
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVW 305
E +K+ DFGL+R + T+ + AG W APE + + FS SDVW
Sbjct: 146 GEN--------HLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVW 197
Query: 306 SYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHM 364
++GV+LWE+ T G PY I+ + + P CP+ LM ACW+ +
Sbjct: 198 AFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSD 256
Query: 365 RPSFKTILKALNNIVHSEFI 384
RPSF I +A + I
Sbjct: 257 RPSFAEIHQAFETMFQESSI 276
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 126/256 (49%), Gaps = 19/256 (7%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV 191
+VY+G+++K + + V D +E +E ++ H N+V L+GVC + P ++
Sbjct: 33 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 192 MEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
+E+ G L R +++ VL+ A QI+ M YL + + IHRDL + N L+
Sbjct: 93 IEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLV 149
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVW 305
E +K+ DFGL+R + T+ + AG W APE + + FS SDVW
Sbjct: 150 GEN--------HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 306 SYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHM 364
++GV+LWE+ T G PY I+ + + P CP+ LM ACW+ +
Sbjct: 202 AFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSD 260
Query: 365 RPSFKTILKALNNIVH 380
RPSF I +A +
Sbjct: 261 RPSFAEIHQAFETMFQ 276
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 126/260 (48%), Gaps = 19/260 (7%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV 191
+VY+G+++K + + V D +E +E ++ H N+V L+GVC + P ++
Sbjct: 33 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 192 MEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
E+ G L R +++ VL+ A QI+ M YL + + IHRDL + N L+
Sbjct: 93 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLV 149
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVW 305
E +K+ DFGL+R + T+ + AG W APE + + FS SDVW
Sbjct: 150 GEN--------HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 306 SYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHM 364
++GV+LWE+ T G PY I+ + + P CP+ LM ACW+ +
Sbjct: 202 AFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSD 260
Query: 365 RPSFKTILKALNNIVHSEFI 384
RPSF I +A + I
Sbjct: 261 RPSFAEIHQAFETMFQESSI 280
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 123/300 (41%), Gaps = 44/300 (14%)
Query: 110 KLVEIDYNKLXXXXXXXXXXXXKVYKGIY-------EKQEVAIKVAHPNPDENILENVKQ 162
KL EI + + KVYKG + Q VAIK + + E +
Sbjct: 2 KLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 61
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDV--------- 213
E L H N+V L+GV + L ++ Y G L+ L R DV
Sbjct: 62 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 121
Query: 214 --------LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKIT 265
V QIA GM YL ++H+DL + NVL+ + + +KI+
Sbjct: 122 KSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKL--------NVKIS 170
Query: 266 DFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIP 320
D GL REVY + G WMAPE I FS SD+WSYGVVLWE+ + G P
Sbjct: 171 DLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 230
Query: 321 YKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTI---LKALNN 377
Y + N+ LP P CP LM CW RP FK I L+A N
Sbjct: 231 YCGYS-NQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGN 289
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 126/260 (48%), Gaps = 19/260 (7%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV 191
+VY+G+++K + + V D +E +E ++ H N+V L+GVC + P ++
Sbjct: 30 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 89
Query: 192 MEYARGGPL---NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
E+ G L R +++ VL+ A QI+ M YL + + IHRDL + N L+
Sbjct: 90 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLV 146
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVW 305
E +K+ DFGL+R + T+ + AG W APE + + FS SDVW
Sbjct: 147 GEN--------HLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVW 198
Query: 306 SYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHM 364
++GV+LWE+ T G PY I+ + + P CP+ LM ACW+ +
Sbjct: 199 AFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSD 257
Query: 365 RPSFKTILKALNNIVHSEFI 384
RPSF I +A + I
Sbjct: 258 RPSFAEIHQAFETMFQESSI 277
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 126/260 (48%), Gaps = 19/260 (7%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV 191
+VY+G+++K + + V D +E +E ++ H N+V L+GVC + P ++
Sbjct: 41 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 100
Query: 192 MEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
E+ G L R +++ VL+ A QI+ M YL + + IHRDL + N L+
Sbjct: 101 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLV 157
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVW 305
E +K+ DFGL+R + T+ + AG W APE + + FS SDVW
Sbjct: 158 GEN--------HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 209
Query: 306 SYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHM 364
++GV+LWE+ T G PY I+ + + P CP+ LM ACW+ +
Sbjct: 210 AFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSD 268
Query: 365 RPSFKTILKALNNIVHSEFI 384
RPSF I +A + I
Sbjct: 269 RPSFAEIHQAFETMFQESSI 288
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 126/260 (48%), Gaps = 19/260 (7%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV 191
+VY+G+++K + + V D +E +E ++ H N+V L+GVC + P ++
Sbjct: 28 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 192 MEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
E+ G L R +++ VL+ A QI+ M YL + + IHRDL + N L+
Sbjct: 88 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLV 144
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVW 305
E +K+ DFGL+R + T+ + AG W APE + + FS SDVW
Sbjct: 145 GEN--------HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 306 SYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHM 364
++GV+LWE+ T G PY I+ + + P CP+ LM ACW+ +
Sbjct: 197 AFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSD 255
Query: 365 RPSFKTILKALNNIVHSEFI 384
RPSF I +A + I
Sbjct: 256 RPSFAEIHQAFETMFQESSI 275
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 126/260 (48%), Gaps = 19/260 (7%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV 191
+VY+G+++K + + V D +E +E ++ H N+V L+GVC + P ++
Sbjct: 30 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 89
Query: 192 MEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
E+ G L R +++ VL+ A QI+ M YL + + IHRDL + N L+
Sbjct: 90 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLV 146
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVW 305
E +K+ DFGL+R + T+ + AG W APE + + FS SDVW
Sbjct: 147 GEN--------HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 198
Query: 306 SYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHM 364
++GV+LWE+ T G PY I+ + + P CP+ LM ACW+ +
Sbjct: 199 AFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSD 257
Query: 365 RPSFKTILKALNNIVHSEFI 384
RPSF I +A + I
Sbjct: 258 RPSFAEIHQAFETMFQESSI 277
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 126/260 (48%), Gaps = 19/260 (7%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV 191
+VY+G+++K + + V D +E +E ++ H N+V L+GVC + P ++
Sbjct: 30 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 89
Query: 192 MEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
E+ G L R +++ VL+ A QI+ M YL + + IHRDL + N L+
Sbjct: 90 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLV 146
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVW 305
E +K+ DFGL+R + T+ + AG W APE + + FS SDVW
Sbjct: 147 GEN--------HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 198
Query: 306 SYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHM 364
++GV+LWE+ T G PY I+ + + P CP+ LM ACW+ +
Sbjct: 199 AFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSD 257
Query: 365 RPSFKTILKALNNIVHSEFI 384
RPSF I +A + I
Sbjct: 258 RPSFAEIHQAFETMFQESSI 277
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 126/260 (48%), Gaps = 19/260 (7%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV 191
+VY+G+++K + + V D +E +E ++ H N+V L+GVC + P ++
Sbjct: 28 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 192 MEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
E+ G L R +++ VL+ A QI+ M YL + + IHRDL + N L+
Sbjct: 88 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLV 144
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVW 305
E +K+ DFGL+R + T+ + AG W APE + + FS SDVW
Sbjct: 145 GEN--------HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 306 SYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHM 364
++GV+LWE+ T G PY I+ + + P CP+ LM ACW+ +
Sbjct: 197 AFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSD 255
Query: 365 RPSFKTILKALNNIVHSEFI 384
RPSF I +A + I
Sbjct: 256 RPSFAEIHQAFETMFQESSI 275
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 125/256 (48%), Gaps = 19/256 (7%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV 191
+VY+G+++K + + V D +E +E ++ H N+V L+GVC + P ++
Sbjct: 28 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 192 MEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
E+ G L R +++ VL+ A QI+ M YL + + IHRDL + N L+
Sbjct: 88 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLV 144
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVW 305
E +K+ DFGL+R + T+ + AG W APE + + FS SDVW
Sbjct: 145 GEN--------HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 306 SYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHM 364
++GV+LWE+ T G PY I+ + + P CP+ LM ACW+ +
Sbjct: 197 AFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSD 255
Query: 365 RPSFKTILKALNNIVH 380
RPSF I +A +
Sbjct: 256 RPSFAEIHQAFETMFQ 271
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 125/256 (48%), Gaps = 19/256 (7%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV 191
+VY+G+++K + + V D +E +E ++ H N+V L+GVC + P ++
Sbjct: 33 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 192 MEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
E+ G L R +++ VL+ A QI+ M YL + + IHRDL + N L+
Sbjct: 93 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLV 149
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVW 305
E +K+ DFGL+R + T+ + AG W APE + + FS SDVW
Sbjct: 150 GEN--------HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 306 SYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHM 364
++GV+LWE+ T G PY I+ + + P CP+ LM ACW+ +
Sbjct: 202 AFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSD 260
Query: 365 RPSFKTILKALNNIVH 380
RPSF I +A +
Sbjct: 261 RPSFAEIHQAFETMFQ 276
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 125/256 (48%), Gaps = 19/256 (7%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV 191
+VY+G+++K + + V D +E +E ++ H N+V L+GVC + P ++
Sbjct: 32 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 91
Query: 192 MEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
E+ G L R +++ VL+ A QI+ M YL + + IHRDL + N L+
Sbjct: 92 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLV 148
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVW 305
E +K+ DFGL+R + T+ + AG W APE + + FS SDVW
Sbjct: 149 GEN--------HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 200
Query: 306 SYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHM 364
++GV+LWE+ T G PY I+ + + P CP+ LM ACW+ +
Sbjct: 201 AFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSD 259
Query: 365 RPSFKTILKALNNIVH 380
RPSF I +A +
Sbjct: 260 RPSFAEIHQAFETMFQ 275
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 126/260 (48%), Gaps = 19/260 (7%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV 191
+VY+G+++K + + V D +E +E ++ H N+V L+GVC + P ++
Sbjct: 29 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 88
Query: 192 MEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
+E+ G L R +++ VL+ A QI+ M YL + + IHRDL + N L+
Sbjct: 89 IEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLV 145
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVW 305
E +K+ DFGL+R + T + AG W APE + + FS SDVW
Sbjct: 146 GEN--------HLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 197
Query: 306 SYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHM 364
++GV+LWE+ T G PY I+ + + P CP+ LM ACW+ +
Sbjct: 198 AFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSD 256
Query: 365 RPSFKTILKALNNIVHSEFI 384
RPSF I +A + I
Sbjct: 257 RPSFAEIHQAFETMFQESSI 276
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 134/284 (47%), Gaps = 42/284 (14%)
Query: 133 VYKG-----IYEKQEVAIKVAHPNPDENILENVK--QEGKLLWLFDHRNIVSLIGVCLQS 185
VY+G I + E + V N ++ E ++ E ++ F ++V L+GV +
Sbjct: 33 VYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 92
Query: 186 PKLCLVMEYARGGPLNRVLAGRKIRPDV-------------LVDWAIQIAEGMNYLHCQA 232
+VME G L L R +RP+ ++ A +IA+GM YL+ +
Sbjct: 93 QPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK- 149
Query: 233 PISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWM 288
+HRDL + N +++ T+KI DFG+ R++ +T G WM
Sbjct: 150 --KFVHRDLAARNCMVAHDF--------TVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 289 APEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCP 347
APE +K +F+ +SD+WS+GVVLWE+ + E PY+ ++ L P CP
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY-LDQPDNCP 258
Query: 348 QLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESF 391
+ LM CW+ + +MRP+F I+ L + +H F P SF
Sbjct: 259 ERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSF---PEVSF 299
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 125/254 (49%), Gaps = 19/254 (7%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV 191
+VY+G+++K + + V D +E +E ++ H N+V L+GVC + P ++
Sbjct: 28 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 192 MEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
E+ G L R +++ VL+ A QI+ M YL + + IHRDL + N L+
Sbjct: 88 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLV 144
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVW 305
E +K+ DFGL+R + T+ + AG W APE + + FS SDVW
Sbjct: 145 GEN--------HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 306 SYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHM 364
++GV+LWE+ T G PY I+ + + P CP+ LM ACW+ +
Sbjct: 197 AFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSD 255
Query: 365 RPSFKTILKALNNI 378
RPSF I +A +
Sbjct: 256 RPSFAEIHQAFETM 269
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 131/264 (49%), Gaps = 26/264 (9%)
Query: 132 KVYKGIYE----KQEV--AIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQS 185
+VYKG+ + K+EV AIK E + E ++ F H NI+ L GV +
Sbjct: 59 EVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY 118
Query: 186 PKLCLVMEYARGGPLNRVLAGRKIRPDVL--VDWAIQIAEGMNYLHCQAPISLIHRDLKS 243
+ ++ EY G L++ L + VL V IA GM YL A ++ +HRDL +
Sbjct: 119 KPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL---ANMNYVHRDLAA 175
Query: 244 SNVLLSEPIENEDLQFKTLKITDFGLAREVY---KTTHMSAAGTYA--WMAPEVIKTSIF 298
N+L+ N +L K++DFGL+R + + T+ ++ G W APE I F
Sbjct: 176 RNILV-----NSNL---VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKF 227
Query: 299 SKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEAC 357
+ ASDVWS+G+V+WE++T GE PY ++ + LP P CP LM C
Sbjct: 228 TSASDVWSFGIVMWEVMTYGERPYWELS-NHEVMKAINDGFRLPTPMDCPSAIYQLMMQC 286
Query: 358 WEADSHMRPSFKTILKALNNIVHS 381
W+ + RP F I+ L+ ++ +
Sbjct: 287 WQQERARRPKFADIVSILDKLIRA 310
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 127/267 (47%), Gaps = 41/267 (15%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFD-HRNIVSLIGVCLQSPKLCLVMEYARG 197
E VA+K+ + E L ++ E +++ + H+NI++L+G C Q L +++EYA
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 125
Query: 198 GPLNRVLAGRKIRP-------DV------------LVDWAIQIAEGMNYLHCQAPISLIH 238
G L L R RP D+ LV Q+A GM YL Q IH
Sbjct: 126 GNLREYLRAR--RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 180
Query: 239 RDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVI 293
RDL + NVL++E +KI DFGLAR++ YK T + WMAPE +
Sbjct: 181 RDLAARNVLVTEN--------NVMKIADFGLARDINNIDYYKNT-TNGRLPVKWMAPEAL 231
Query: 294 KTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKT 352
+++ SDVWS+GV++WE+ T G PY I + P+ C
Sbjct: 232 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-RMDKPANCTNELYM 290
Query: 353 LMEACWEADSHMRPSFKTILKALNNIV 379
+M CW A RP+FK +++ L+ I+
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 127/267 (47%), Gaps = 41/267 (15%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFD-HRNIVSLIGVCLQSPKLCLVMEYARG 197
E VA+K+ + E L ++ E +++ + H+NI++L+G C Q L +++EYA
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASK 125
Query: 198 GPLNRVLAGRKIRP-------DV------------LVDWAIQIAEGMNYLHCQAPISLIH 238
G L L R RP D+ LV Q+A GM YL Q IH
Sbjct: 126 GNLREYLRAR--RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 180
Query: 239 RDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVI 293
RDL + NVL++E +KI DFGLAR++ YK T + WMAPE +
Sbjct: 181 RDLAARNVLVTEN--------NVMKIADFGLARDINNIDYYKKT-TNGRLPVKWMAPEAL 231
Query: 294 KTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKT 352
+++ SDVWS+GV++WE+ T G PY I + P+ C
Sbjct: 232 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-RMDKPANCTNELYM 290
Query: 353 LMEACWEADSHMRPSFKTILKALNNIV 379
+M CW A RP+FK +++ L+ I+
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 133/284 (46%), Gaps = 42/284 (14%)
Query: 133 VYKG-----IYEKQEVAIKVAHPNPDENILENVK--QEGKLLWLFDHRNIVSLIGVCLQS 185
VY+G I + E + V N ++ E ++ E ++ F ++V L+GV +
Sbjct: 30 VYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 89
Query: 186 PKLCLVMEYARGGPLNRVLAGRKIRPDV-------------LVDWAIQIAEGMNYLHCQA 232
+VME G L L R +RP+ ++ A +IA+GM YL+ +
Sbjct: 90 QPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK- 146
Query: 233 PISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWM 288
+HRDL + N +++ T+KI DFG+ R++ +T G WM
Sbjct: 147 --KFVHRDLAARNCMVAHDF--------TVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 196
Query: 289 APEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCP 347
APE +K +F+ +SD+WS+GVVLWE+ + E PY+ ++ L P CP
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY-LDQPDNCP 255
Query: 348 QLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESF 391
+ LM CW+ + MRP+F I+ L + +H F P SF
Sbjct: 256 ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSF---PEVSF 296
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 126/260 (48%), Gaps = 19/260 (7%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV 191
+VY+G+++K + + V D +E +E ++ H N+V L+GVC + P ++
Sbjct: 26 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 85
Query: 192 MEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
+E+ G L R +++ VL+ A QI+ M YL + + IHRDL + N L+
Sbjct: 86 IEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLV 142
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVW 305
E +K+ DFGL+R + T + AG W APE + + FS SDVW
Sbjct: 143 GEN--------HLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 306 SYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHM 364
++GV+LWE+ T G PY I+ + + P CP+ LM ACW+ +
Sbjct: 195 AFGVLLWEIATYGMSPYPGIDPSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSD 253
Query: 365 RPSFKTILKALNNIVHSEFI 384
RPSF I +A + I
Sbjct: 254 RPSFAEIHQAFETMFQESSI 273
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 133/284 (46%), Gaps = 42/284 (14%)
Query: 133 VYKG-----IYEKQEVAIKVAHPNPDENILENVK--QEGKLLWLFDHRNIVSLIGVCLQS 185
VY+G I + E + V N ++ E ++ E ++ F ++V L+GV +
Sbjct: 33 VYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 92
Query: 186 PKLCLVMEYARGGPLNRVLAGRKIRPDV-------------LVDWAIQIAEGMNYLHCQA 232
+VME G L L R +RP+ ++ A +IA+GM YL+ +
Sbjct: 93 QPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK- 149
Query: 233 PISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWM 288
+HRDL + N +++ T+KI DFG+ R++ +T G WM
Sbjct: 150 --KFVHRDLAARNCMVAHDF--------TVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 289 APEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCP 347
APE +K +F+ +SD+WS+GVVLWE+ + E PY+ ++ L P CP
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY-LDQPDNCP 258
Query: 348 QLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESF 391
+ LM CW+ + MRP+F I+ L + +H F P SF
Sbjct: 259 ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSF---PEVSF 299
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 127/267 (47%), Gaps = 41/267 (15%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFD-HRNIVSLIGVCLQSPKLCLVMEYARG 197
E VA+K+ + E L ++ E +++ + H+NI++L+G C Q L +++EYA
Sbjct: 66 EAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 125
Query: 198 GPLNRVLAGRKIRP-------DV------------LVDWAIQIAEGMNYLHCQAPISLIH 238
G L L R RP D+ LV Q+A GM YL Q IH
Sbjct: 126 GNLREYLRAR--RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 180
Query: 239 RDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVI 293
RDL + NVL++E +KI DFGLAR++ YK T + WMAPE +
Sbjct: 181 RDLAARNVLVTEN--------NVMKIADFGLARDINNIDYYKKT-TNGRLPVKWMAPEAL 231
Query: 294 KTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKT 352
+++ SDVWS+GV++WE+ T G PY I + P+ C
Sbjct: 232 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-RMDKPANCTNELYM 290
Query: 353 LMEACWEADSHMRPSFKTILKALNNIV 379
+M CW A RP+FK +++ L+ I+
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 125/260 (48%), Gaps = 19/260 (7%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV 191
+VY+G+++K + + V D +E +E ++ H N+V L+GVC + P ++
Sbjct: 26 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 85
Query: 192 MEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
E+ G L R +++ VL+ A QI+ M YL + + IHRDL + N L+
Sbjct: 86 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLV 142
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVW 305
E +K+ DFGL+R + T + AG W APE + + FS SDVW
Sbjct: 143 GEN--------HLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 306 SYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHM 364
++GV+LWE+ T G PY I+ + + P CP+ LM ACW+ +
Sbjct: 195 AFGVLLWEIATYGMSPYPGIDPSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSD 253
Query: 365 RPSFKTILKALNNIVHSEFI 384
RPSF I +A + I
Sbjct: 254 RPSFAEIHQAFETMFQESSI 273
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 126/260 (48%), Gaps = 19/260 (7%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV 191
+VY+G+++K + + V D +E +E ++ H N+V L+GVC + P ++
Sbjct: 274 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 333
Query: 192 MEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
E+ G L R +++ VL+ A QI+ M YL + + IHR+L + N L+
Sbjct: 334 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLV 390
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVW 305
E +K+ DFGL+R + T+ + AG W APE + + FS SDVW
Sbjct: 391 GEN--------HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 442
Query: 306 SYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHM 364
++GV+LWE+ T G PY I+ + + P CP+ LM ACW+ +
Sbjct: 443 AFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSD 501
Query: 365 RPSFKTILKALNNIVHSEFI 384
RPSF I +A + I
Sbjct: 502 RPSFAEIHQAFETMFQESSI 521
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 32 PDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPAN 91
P+L+ ALYD+ A G + LS+ +G+ + VL + G W E + + G P+N
Sbjct: 82 PNLFVALYDFVASGDNTLSITKGEKLRVLGYNHN-----GEW---CEAQTKNGQGWVPSN 133
Query: 92 FVSSIEDI 99
+++ + +
Sbjct: 134 YITPVNSL 141
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 126/260 (48%), Gaps = 19/260 (7%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV 191
+VY+G+++K + + V D +E +E ++ H N+V L+GVC + P ++
Sbjct: 235 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294
Query: 192 MEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
E+ G L R +++ VL+ A QI+ M YL + + IHR+L + N L+
Sbjct: 295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLV 351
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVW 305
E +K+ DFGL+R + T+ + AG W APE + + FS SDVW
Sbjct: 352 GEN--------HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 403
Query: 306 SYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHM 364
++GV+LWE+ T G PY I+ + + P CP+ LM ACW+ +
Sbjct: 404 AFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSD 462
Query: 365 RPSFKTILKALNNIVHSEFI 384
RPSF I +A + I
Sbjct: 463 RPSFAEIHQAFETMFQESSI 482
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 32 PDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPAN 91
P+L+ ALYD+ A G + LS+ +G+ + VL + G W E + + G P+N
Sbjct: 43 PNLFVALYDFVASGDNTLSITKGEKLRVLGYNHN-----GEW---CEAQTKNGQGWVPSN 94
Query: 92 FVSSIEDI 99
+++ + +
Sbjct: 95 YITPVNSL 102
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 127/267 (47%), Gaps = 41/267 (15%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFD-HRNIVSLIGVCLQSPKLCLVMEYARG 197
E VA+K+ + E L ++ E +++ + H+NI++L+G C Q L +++EYA
Sbjct: 53 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 112
Query: 198 GPLNRVLAGRKIRP-------DV------------LVDWAIQIAEGMNYLHCQAPISLIH 238
G L L R RP D+ LV Q+A GM YL Q IH
Sbjct: 113 GNLREYLRAR--RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 167
Query: 239 RDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVI 293
RDL + NVL++E +KI DFGLAR++ YK T + WMAPE +
Sbjct: 168 RDLTARNVLVTEN--------NVMKIADFGLARDINNIDYYKKT-TNGRLPVKWMAPEAL 218
Query: 294 KTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKT 352
+++ SDVWS+GV++WE+ T G PY I + P+ C
Sbjct: 219 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-RMDKPANCTNELYM 277
Query: 353 LMEACWEADSHMRPSFKTILKALNNIV 379
+M CW A RP+FK +++ L+ I+
Sbjct: 278 MMRDCWHAVPSQRPTFKQLVEDLDRIL 304
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 127/267 (47%), Gaps = 41/267 (15%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLF-DHRNIVSLIGVCLQSPKLCLVMEYARG 197
E VA+K+ + E L ++ E +++ + H+NI++L+G C Q L +++EYA
Sbjct: 112 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 171
Query: 198 GPLNRVLAGRKIRP-------DV------------LVDWAIQIAEGMNYLHCQAPISLIH 238
G L L R RP D+ LV Q+A GM YL Q IH
Sbjct: 172 GNLREYLRAR--RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 226
Query: 239 RDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVI 293
RDL + NVL++E +KI DFGLAR++ YK T + WMAPE +
Sbjct: 227 RDLAARNVLVTEN--------NVMKIADFGLARDINNIDYYKKT-TNGRLPVKWMAPEAL 277
Query: 294 KTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKT 352
+++ SDVWS+GV++WE+ T G PY I + P+ C
Sbjct: 278 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-RMDKPANCTNELYM 336
Query: 353 LMEACWEADSHMRPSFKTILKALNNIV 379
+M CW A RP+FK +++ L+ I+
Sbjct: 337 MMRDCWHAVPSQRPTFKQLVEDLDRIL 363
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 125/260 (48%), Gaps = 19/260 (7%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV 191
+VY+G+++K + + V D +E +E ++ H N+V L+GVC + P ++
Sbjct: 26 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 85
Query: 192 MEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
E+ G L R +++ VL+ A QI+ M YL + + IHRDL + N L+
Sbjct: 86 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLV 142
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVW 305
E +K+ DFGL+R + T + AG W APE + + FS SDVW
Sbjct: 143 GEN--------HLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 306 SYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHM 364
++GV+LWE+ T G PY I+ + + P CP+ LM ACW+ +
Sbjct: 195 AFGVLLWEIATYGMSPYPGIDPSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSD 253
Query: 365 RPSFKTILKALNNIVHSEFI 384
RPSF I +A + I
Sbjct: 254 RPSFAEIHQAFETMFQESSI 273
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 124/256 (48%), Gaps = 19/256 (7%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV 191
+VY+G+++K + + V D +E +E ++ H N+V L+GVC + P ++
Sbjct: 33 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 192 MEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
E+ G L R +++ VL+ A QI+ M YL + + IHRDL + N L+
Sbjct: 93 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLV 149
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVW 305
E +K+ DFGL+R + T + AG W APE + + FS SDVW
Sbjct: 150 GEN--------HLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 306 SYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHM 364
++GV+LWE+ T G PY I+ + + P CP+ LM ACW+ +
Sbjct: 202 AFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSD 260
Query: 365 RPSFKTILKALNNIVH 380
RPSF I +A +
Sbjct: 261 RPSFAEIHQAFETMFQ 276
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 126/260 (48%), Gaps = 19/260 (7%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV 191
+VY+G+++K + + V D +E +E ++ H N+V L+GVC + P ++
Sbjct: 232 EVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 291
Query: 192 MEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
E+ G L R +++ VL+ A QI+ M YL + + IHR+L + N L+
Sbjct: 292 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLV 348
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVW 305
E +K+ DFGL+R + T+ + AG W APE + + FS SDVW
Sbjct: 349 GEN--------HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 400
Query: 306 SYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHM 364
++GV+LWE+ T G PY I+ + + P CP+ LM ACW+ +
Sbjct: 401 AFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSD 459
Query: 365 RPSFKTILKALNNIVHSEFI 384
RPSF I +A + I
Sbjct: 460 RPSFAEIHQAFETMFQESSI 479
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 32 PDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPAN 91
P+L+ ALYD+ A G + LS+ +G+ + VL + G W E + + G P+N
Sbjct: 40 PNLFVALYDFVASGDNTLSITKGEKLRVLGYNHN-----GEW---CEAQTKNGQGWVPSN 91
Query: 92 FVSSIEDI 99
+++ + +
Sbjct: 92 YITPVNSL 99
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 127/267 (47%), Gaps = 41/267 (15%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFD-HRNIVSLIGVCLQSPKLCLVMEYARG 197
E VA+K+ + E L ++ E +++ + H+NI++L+G C Q L +++EYA
Sbjct: 58 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 117
Query: 198 GPLNRVLAGRKIRP-------DV------------LVDWAIQIAEGMNYLHCQAPISLIH 238
G L L R RP D+ LV Q+A GM YL Q IH
Sbjct: 118 GNLREYLRAR--RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 172
Query: 239 RDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVI 293
RDL + NVL++E +KI DFGLAR++ YK T + WMAPE +
Sbjct: 173 RDLAARNVLVTEN--------NVMKIADFGLARDINNIDYYKKT-TNGRLPVKWMAPEAL 223
Query: 294 KTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKT 352
+++ SDVWS+GV++WE+ T G PY I + P+ C
Sbjct: 224 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-RMDKPANCTNELYM 282
Query: 353 LMEACWEADSHMRPSFKTILKALNNIV 379
+M CW A RP+FK +++ L+ I+
Sbjct: 283 MMRDCWHAVPSQRPTFKQLVEDLDRIL 309
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 127/267 (47%), Gaps = 41/267 (15%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFD-HRNIVSLIGVCLQSPKLCLVMEYARG 197
E VA+K+ + E L ++ E +++ + H+NI++L+G C Q L +++EYA
Sbjct: 55 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 114
Query: 198 GPLNRVLAGRKIRP-------DV------------LVDWAIQIAEGMNYLHCQAPISLIH 238
G L L R RP D+ LV Q+A GM YL Q IH
Sbjct: 115 GNLREYLRAR--RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 169
Query: 239 RDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVI 293
RDL + NVL++E +KI DFGLAR++ YK T + WMAPE +
Sbjct: 170 RDLAARNVLVTEN--------NVMKIADFGLARDINNIDYYKKT-TNGRLPVKWMAPEAL 220
Query: 294 KTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKT 352
+++ SDVWS+GV++WE+ T G PY I + P+ C
Sbjct: 221 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-RMDKPANCTNELYM 279
Query: 353 LMEACWEADSHMRPSFKTILKALNNIV 379
+M CW A RP+FK +++ L+ I+
Sbjct: 280 MMRDCWHAVPSQRPTFKQLVEDLDRIL 306
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 126/267 (47%), Gaps = 41/267 (15%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFD-HRNIVSLIGVCLQSPKLCLVMEYARG 197
E VA+K+ + E L ++ E +++ + H+NI+ L+G C Q L +++EYA
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASK 125
Query: 198 GPLNRVLAGRKIRP-------DV------------LVDWAIQIAEGMNYLHCQAPISLIH 238
G L L R RP D+ LV Q+A GM YL Q IH
Sbjct: 126 GNLREYLRAR--RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 180
Query: 239 RDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVI 293
RDL + NVL++E +KI DFGLAR++ YK T + WMAPE +
Sbjct: 181 RDLAARNVLVTEN--------NVMKIADFGLARDINNIDYYKKT-TNGRLPVKWMAPEAL 231
Query: 294 KTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKT 352
+++ SDVWS+GV++WE+ T G PY I + P+ C
Sbjct: 232 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-RMDKPANCTNELYM 290
Query: 353 LMEACWEADSHMRPSFKTILKALNNIV 379
+M CW A RP+FK +++ L+ I+
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 127/267 (47%), Gaps = 41/267 (15%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFD-HRNIVSLIGVCLQSPKLCLVMEYARG 197
E VA+K+ + E L ++ E +++ + H+NI++L+G C Q L +++EYA
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 125
Query: 198 GPLNRVLAGRKIRP-------DV------------LVDWAIQIAEGMNYLHCQAPISLIH 238
G L L R RP D+ LV Q+A GM YL Q IH
Sbjct: 126 GNLREYLRAR--RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 180
Query: 239 RDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVI 293
RDL + NVL++E ++I DFGLAR++ YK T + WMAPE +
Sbjct: 181 RDLAARNVLVTEN--------NVMRIADFGLARDINNIDYYKKT-TNGRLPVKWMAPEAL 231
Query: 294 KTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKT 352
+++ SDVWS+GV++WE+ T G PY I + P+ C
Sbjct: 232 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-RMDKPANCTNELYM 290
Query: 353 LMEACWEADSHMRPSFKTILKALNNIV 379
+M CW A RP+FK +++ L+ I+
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 120/247 (48%), Gaps = 20/247 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK E + E ++ FDH NI+ L GV +S + +V EY G L+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 203 VLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L + V LV IA GM YL + + +HRDL + N+L+ N +L
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILI-----NSNL--- 184
Query: 261 TLKITDFGLAREVY---KTTHMSAAGTYA--WMAPEVIKTSIFSKASDVWSYGVVLWELL 315
K++DFGLAR + + + + G W +PE I F+ ASDVWSYG+VLWE++
Sbjct: 185 VCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 316 T-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKA 374
+ GE PY ++ LP P CP LM CW+ D + RP F+ I+
Sbjct: 245 SYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 375 LNNIVHS 381
L+ ++ +
Sbjct: 304 LDKLIRN 310
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 134/265 (50%), Gaps = 31/265 (11%)
Query: 133 VYKGIYEKQEVAIK---VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
VYKG + +VA+K V P P++ + + E +L H NI+ +G + L
Sbjct: 52 VYKGKWHG-DVAVKILKVVDPTPEQ--FQAFRNEVAVLRKTRHVNILLFMGY-MTKDNLA 107
Query: 190 LVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+V ++ G L + L ++ + + L+D A Q A+GM+YLH + ++IHRD+KS+N+
Sbjct: 108 IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIF 164
Query: 248 LSEPIENEDLQFKTLKITDFGLA----REVYKTTHMSAAGTYAWMAPEVIK---TSIFSK 300
L E + T+KI DFGLA R G+ WMAPEVI+ + FS
Sbjct: 165 LHEGL--------TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF 216
Query: 301 ASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP----IPSTCPQLFKTLMEA 356
SDV+SYG+VL+EL+TGE+PY IN P + CP+ K L+
Sbjct: 217 QSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVAD 276
Query: 357 CWEADSHMRPSFKTILKALNNIVHS 381
C + RP F IL ++ + HS
Sbjct: 277 CVKKVKEERPLFPQILSSIELLQHS 301
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 121/249 (48%), Gaps = 22/249 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK E + E ++ FDH N++ L GV +S + ++ E+ G L+
Sbjct: 38 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 97
Query: 203 VLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L + V LV IA GM YL A ++ +HR L + N+L+ N +L
Sbjct: 98 FLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRALAARNILV-----NSNL--- 146
Query: 261 TLKITDFGLAR----EVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWE 313
K++DFGL+R + T+ SA G W APE I+ F+ ASDVWSYG+V+WE
Sbjct: 147 VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWE 206
Query: 314 LLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTIL 372
+++ GE PY + + LP P CP LM CW+ D + RP F I+
Sbjct: 207 VMSYGERPYWDMTNQDVINAIEQD-YRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIV 265
Query: 373 KALNNIVHS 381
L+ ++ +
Sbjct: 266 NTLDKMIRN 274
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 127/268 (47%), Gaps = 43/268 (16%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFD-HRNIVSLIGVCLQSPKLCLVMEYARG 197
E VA+K+ + E L ++ E +++ + H+NI++L+G C Q L +++EYA
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 125
Query: 198 GPLNRVLAGRKIRP-------DV------------LVDWAIQIAEGMNYLHCQAPISLIH 238
G L L R RP D+ LV Q+A GM YL Q IH
Sbjct: 126 GNLREYLRAR--RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 180
Query: 239 RDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV------YKTTHMSAAGTYAWMAPEV 292
RDL + NVL++E +KI DFGLAR++ KTT+ WMAPE
Sbjct: 181 RDLAARNVLVTEN--------NVMKIADFGLARDINNIDXXKKTTN--GRLPVKWMAPEA 230
Query: 293 IKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFK 351
+ +++ SDVWS+GV++WE+ T G PY I + P+ C
Sbjct: 231 LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-RMDKPANCTNELY 289
Query: 352 TLMEACWEADSHMRPSFKTILKALNNIV 379
+M CW A RP+FK +++ L+ I+
Sbjct: 290 MMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 127/268 (47%), Gaps = 43/268 (16%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFD-HRNIVSLIGVCLQSPKLCLVMEYARG 197
E VA+K+ + E L ++ E +++ + H+NI++L+G C Q L +++EYA
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 125
Query: 198 GPLNRVLAGRKIRP-------DV------------LVDWAIQIAEGMNYLHCQAPISLIH 238
G L L R RP D+ LV Q+A GM YL Q IH
Sbjct: 126 GNLREYLRAR--RPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 180
Query: 239 RDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV------YKTTHMSAAGTYAWMAPEV 292
RDL + NVL++E +KI DFGLAR++ KTT+ WMAPE
Sbjct: 181 RDLAARNVLVTEN--------NVMKIADFGLARDINNIDXXKKTTN--GRLPVKWMAPEA 230
Query: 293 IKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFK 351
+ +++ SDVWS+GV++WE+ T G PY I + P+ C
Sbjct: 231 LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-RMDKPANCTNELY 289
Query: 352 TLMEACWEADSHMRPSFKTILKALNNIV 379
+M CW A RP+FK +++ L+ I+
Sbjct: 290 MMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 120/247 (48%), Gaps = 20/247 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK E + E ++ FDH NI+ L GV +S + +V EY G L+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 203 VLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L + V LV IA GM YL + + +HRDL + N+L+ N +L
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGFVHRDLAARNILI-----NSNL--- 184
Query: 261 TLKITDFGLAREVY---KTTHMSAAGTYA--WMAPEVIKTSIFSKASDVWSYGVVLWELL 315
K++DFGL+R + + + + G W +PE I F+ ASDVWSYG+VLWE++
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 316 T-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKA 374
+ GE PY ++ LP P CP LM CW+ D + RP F+ I+
Sbjct: 245 SYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 375 LNNIVHS 381
L+ ++ +
Sbjct: 304 LDKLIRN 310
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 120/247 (48%), Gaps = 20/247 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK E + E ++ FDH NI+ L GV +S + +V EY G L+
Sbjct: 74 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 133
Query: 203 VLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L + V LV IA GM YL + + +HRDL + N+L+ N +L
Sbjct: 134 FLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILI-----NSNL--- 182
Query: 261 TLKITDFGLAREVY---KTTHMSAAGTYA--WMAPEVIKTSIFSKASDVWSYGVVLWELL 315
K++DFGL+R + + + + G W +PE I F+ ASDVWSYG+VLWE++
Sbjct: 183 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 242
Query: 316 T-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKA 374
+ GE PY ++ LP P CP LM CW+ D + RP F+ I+
Sbjct: 243 SYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 301
Query: 375 LNNIVHS 381
L+ ++ +
Sbjct: 302 LDKLIRN 308
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 120/247 (48%), Gaps = 20/247 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK E + E ++ FDH NI+ L GV +S + +V EY G L+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 203 VLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L + V LV IA GM YL + + +HRDL + N+L+ N +L
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILI-----NSNL--- 184
Query: 261 TLKITDFGLAREVY---KTTHMSAAGTYA--WMAPEVIKTSIFSKASDVWSYGVVLWELL 315
K++DFGL+R + + + + G W +PE I F+ ASDVWSYG+VLWE++
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 316 T-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKA 374
+ GE PY ++ LP P CP LM CW+ D + RP F+ I+
Sbjct: 245 SYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 375 LNNIVHS 381
L+ ++ +
Sbjct: 304 LDKLIRN 310
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 120/247 (48%), Gaps = 20/247 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK E + E ++ FDH NI+ L GV +S + +V EY G L+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 203 VLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L + V LV IA GM YL + + +HRDL + N+L+ N +L
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILI-----NSNL--- 184
Query: 261 TLKITDFGLAREVY---KTTHMSAAGTYA--WMAPEVIKTSIFSKASDVWSYGVVLWELL 315
K++DFGL+R + + + + G W +PE I F+ ASDVWSYG+VLWE++
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 316 T-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKA 374
+ GE PY ++ LP P CP LM CW+ D + RP F+ I+
Sbjct: 245 SYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 375 LNNIVHS 381
L+ ++ +
Sbjct: 304 LDKLIRN 310
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 120/247 (48%), Gaps = 20/247 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK E + E ++ FDH NI+ L GV +S + +V EY G L+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 203 VLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L + V LV IA GM YL + + +HRDL + N+L+ N +L
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILI-----NSNL--- 184
Query: 261 TLKITDFGLAREVY---KTTHMSAAGTYA--WMAPEVIKTSIFSKASDVWSYGVVLWELL 315
K++DFGL+R + + + + G W +PE I F+ ASDVWSYG+VLWE++
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 316 T-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKA 374
+ GE PY ++ LP P CP LM CW+ D + RP F+ I+
Sbjct: 245 SYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 375 LNNIVHS 381
L+ ++ +
Sbjct: 304 LDKLIRN 310
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 120/247 (48%), Gaps = 20/247 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK E + E ++ FDH NI+ L GV +S + +V EY G L+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 203 VLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L + V LV IA GM YL + + +HRDL + N+L+ N +L
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILI-----NSNL--- 184
Query: 261 TLKITDFGLAREVY---KTTHMSAAGTYA--WMAPEVIKTSIFSKASDVWSYGVVLWELL 315
K++DFGL+R + + + + G W +PE I F+ ASDVWSYG+VLWE++
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 316 T-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKA 374
+ GE PY ++ LP P CP LM CW+ D + RP F+ I+
Sbjct: 245 SYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 375 LNNIVHS 381
L+ ++ +
Sbjct: 304 LDKLIRN 310
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 119/256 (46%), Gaps = 19/256 (7%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV 191
+VY G+++K + + V D +E +E ++ H N+V L+GVC P +V
Sbjct: 47 EVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIV 106
Query: 192 MEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
EY G L R ++ VL+ A QI+ M YL + + IHRDL + N L+
Sbjct: 107 TEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLV 163
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVW 305
E +K+ DFGL+R + T+ + AG W APE + + FS SDVW
Sbjct: 164 GEN--------HVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVW 215
Query: 306 SYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHM 364
++GV+LWE+ T G PY I+ + P CP LM ACW+
Sbjct: 216 AFGVLLWEIATYGMSPYPGIDLSQVYDLLEKG-YRMEQPEGCPPKVYELMRACWKWSPAD 274
Query: 365 RPSFKTILKALNNIVH 380
RPSF +A + H
Sbjct: 275 RPSFAETHQAFETMFH 290
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 126/267 (47%), Gaps = 41/267 (15%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFD-HRNIVSLIGVCLQSPKLCLVMEYARG 197
E VA+K+ + E L ++ E +++ + H+NI++L+G C Q L +++ YA
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASK 125
Query: 198 GPLNRVLAGRKIRP-------DV------------LVDWAIQIAEGMNYLHCQAPISLIH 238
G L L R RP D+ LV Q+A GM YL Q IH
Sbjct: 126 GNLREYLRAR--RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 180
Query: 239 RDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVI 293
RDL + NVL++E +KI DFGLAR++ YK T + WMAPE +
Sbjct: 181 RDLAARNVLVTEN--------NVMKIADFGLARDINNIDYYKKT-TNGRLPVKWMAPEAL 231
Query: 294 KTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKT 352
+++ SDVWS+GV++WE+ T G PY I + P+ C
Sbjct: 232 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-RMDKPANCTNELYM 290
Query: 353 LMEACWEADSHMRPSFKTILKALNNIV 379
+M CW A RP+FK +++ L+ I+
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 119/247 (48%), Gaps = 20/247 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK E + E ++ FDH NI+ L GV +S + +V EY G L+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 203 VLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L + V LV IA GM YL + + +HRDL + N+L+ N +L
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILI-----NSNL--- 184
Query: 261 TLKITDFGLAREVY---KTTHMSAAGTYA--WMAPEVIKTSIFSKASDVWSYGVVLWELL 315
K++DFGL R + + + + G W +PE I F+ ASDVWSYG+VLWE++
Sbjct: 185 VCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 316 T-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKA 374
+ GE PY ++ LP P CP LM CW+ D + RP F+ I+
Sbjct: 245 SYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 375 LNNIVHS 381
L+ ++ +
Sbjct: 304 LDKLIRN 310
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 120/247 (48%), Gaps = 20/247 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK E + E ++ FDH NI+ L GV +S + +V EY G L+
Sbjct: 64 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 123
Query: 203 VLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L + V LV IA GM YL + + +HRDL + N+L+ N +L
Sbjct: 124 FLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILI-----NSNL--- 172
Query: 261 TLKITDFGLAREVY---KTTHMSAAGTYA--WMAPEVIKTSIFSKASDVWSYGVVLWELL 315
K++DFGL+R + + + + G W +PE I F+ ASDVWSYG+VLWE++
Sbjct: 173 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 232
Query: 316 T-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKA 374
+ GE PY ++ LP P CP LM CW+ D + RP F+ I+
Sbjct: 233 SYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 291
Query: 375 LNNIVHS 381
L+ ++ +
Sbjct: 292 LDKLIRN 298
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 109/247 (44%), Gaps = 20/247 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK E + E ++ FDH NI+ L GV + +V EY G L+
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 203 VLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L + + LV + GM YL + + +HRDL + NVL+ +
Sbjct: 140 FLRTHDGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNL-------- 188
Query: 261 TLKITDFGLAREVYKTTHMSAAGTYA-----WMAPEVIKTSIFSKASDVWSYGVVLWELL 315
K++DFGL+R + + T W APE I FS ASDVWS+GVV+WE+L
Sbjct: 189 VCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
Query: 316 T-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKA 374
GE PY ++ LP P CP LM CW D RP F I+
Sbjct: 249 AYGERPYWNMTNRDVISSVEEG-YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSV 307
Query: 375 LNNIVHS 381
L+ ++ S
Sbjct: 308 LDALIRS 314
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 118/248 (47%), Gaps = 20/248 (8%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
K +VAIK E+ +E +++ H +V L GVCL+ +CLV E+ G
Sbjct: 31 KDKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC 88
Query: 200 LNRVLAGRK--IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDL 257
L+ L ++ + L+ + + EGM YL S+IHRDL + N L+ E
Sbjct: 89 LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRDLAARNCLVGEN------ 139
Query: 258 QFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWEL 314
+ +K++DFG+ R V + S+ GT W +PEV S +S SDVWS+GV++WE+
Sbjct: 140 --QVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 197
Query: 315 LT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILK 373
+ G+IPY++ L P +M CW+ RP+F +L+
Sbjct: 198 FSEGKIPYEN-RSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLR 256
Query: 374 ALNNIVHS 381
L I S
Sbjct: 257 QLAAIAAS 264
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 109/249 (43%), Gaps = 24/249 (9%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK E + E ++ FDH NI+ L GV + +V EY G L+
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 203 VLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L + + LV + GM YL + + +HRDL + NVL+ +
Sbjct: 140 FLRTHDGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNL-------- 188
Query: 261 TLKITDFGLAR-------EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWE 313
K++DFGL+R Y TT W APE I FS ASDVWS+GVV+WE
Sbjct: 189 VCKVSDFGLSRVLEDDPDAAYTTT--GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWE 246
Query: 314 LLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTIL 372
+L GE PY ++ LP P CP LM CW D RP F I+
Sbjct: 247 VLAYGERPYWNMTNRDVISSVEEG-YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIV 305
Query: 373 KALNNIVHS 381
L+ ++ S
Sbjct: 306 SVLDALIRS 314
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 126/267 (47%), Gaps = 41/267 (15%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFD-HRNIVSLIGVCLQSPKLCLVMEYARG 197
E VA+K+ + E L ++ E +++ + H+NI++L+G C Q L +++ YA
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASK 125
Query: 198 GPLNRVLAGRKIRP-------DV------------LVDWAIQIAEGMNYLHCQAPISLIH 238
G L L R RP D+ LV Q+A GM YL Q IH
Sbjct: 126 GNLREYLRAR--RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 180
Query: 239 RDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVI 293
RDL + NVL++E +KI DFGLAR++ YK T + WMAPE +
Sbjct: 181 RDLAARNVLVTEN--------NVMKIADFGLARDINNIDYYKKT-TNGRLPVKWMAPEAL 231
Query: 294 KTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKT 352
+++ SDVWS+GV++WE+ T G PY I + P+ C
Sbjct: 232 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-RMDKPANCTNELYM 290
Query: 353 LMEACWEADSHMRPSFKTILKALNNIV 379
+M CW A RP+FK +++ L+ I+
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 120/247 (48%), Gaps = 20/247 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK E + E ++ FDH NI+ L GV +S + +V EY G L+
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 106
Query: 203 VLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L + V LV IA GM YL + + +HRDL + N+L+ N +L
Sbjct: 107 FLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILI-----NSNL--- 155
Query: 261 TLKITDFGLAREVY---KTTHMSAAGTYA--WMAPEVIKTSIFSKASDVWSYGVVLWELL 315
K++DFGL+R + + + + G W +PE I F+ ASDVWSYG+VLWE++
Sbjct: 156 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 215
Query: 316 T-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKA 374
+ GE PY ++ LP P CP LM CW+ D + RP F+ I+
Sbjct: 216 SYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 274
Query: 375 LNNIVHS 381
L+ ++ +
Sbjct: 275 LDKLIRN 281
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 117/269 (43%), Gaps = 46/269 (17%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VA+K+ ++ + ++E L+ FD+ NIV L+GVC +CL+ EY G LN
Sbjct: 80 VAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNE 139
Query: 203 VLAGRKIRPDVLVDW---------------------------AIQIAEGMNYLHCQAPIS 235
L R + P + A Q+A GM YL +
Sbjct: 140 FL--RSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL---SERK 194
Query: 236 LIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYA----WMAPE 291
+HRDL + N L+ E + +KI DFGL+R +Y + A G A WM PE
Sbjct: 195 FVHRDLATRNCLVGENM--------VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPE 246
Query: 292 VIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF 350
I + ++ SDVW+YGVVLWE+ + G PY + + L P CP
Sbjct: 247 SIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNI-LACPENCPLEL 305
Query: 351 KTLMEACWEADSHMRPSFKTILKALNNIV 379
LM CW RPSF +I + L +
Sbjct: 306 YNLMRLCWSKLPADRPSFCSIHRILQRMC 334
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 119/249 (47%), Gaps = 24/249 (9%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK E + E ++ FDH N+V L GV + + +V+E+ G L+
Sbjct: 74 VAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDA 133
Query: 203 VLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L + V LV IA GM YL A + +HRDL + N+L+ N +L
Sbjct: 134 FLRKHDGQFTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILV-----NSNL--- 182
Query: 261 TLKITDFGLAR-------EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWE 313
K++DFGL+R VY TT W APE I+ F+ ASDVWSYG+V+WE
Sbjct: 183 VCKVSDFGLSRVIEDDPEAVYTTT--GGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWE 240
Query: 314 LLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTIL 372
+++ GE PY ++ LP P CP LM CW+ + RP F+ I+
Sbjct: 241 VMSYGERPYWDMSNQDVIKAIEEG-YRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIV 299
Query: 373 KALNNIVHS 381
L+ ++ +
Sbjct: 300 GILDKMIRN 308
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 117/248 (47%), Gaps = 20/248 (8%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
K +VAIK E+ +E +++ H +V L GVCL+ +CLV E+ G
Sbjct: 31 KDKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC 88
Query: 200 LNRVLAGRK--IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDL 257
L+ L ++ + L+ + + EGM YL +IHRDL + N L+ E
Sbjct: 89 LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGEN------ 139
Query: 258 QFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWEL 314
+ +K++DFG+ R V + S+ GT W +PEV S +S SDVWS+GV++WE+
Sbjct: 140 --QVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 197
Query: 315 LT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILK 373
+ G+IPY++ L P +M CW+ RP+F +L+
Sbjct: 198 FSEGKIPYEN-RSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLR 256
Query: 374 ALNNIVHS 381
L I S
Sbjct: 257 QLAEIAES 264
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 121/262 (46%), Gaps = 35/262 (13%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+K VA+K A +P ++ ++E +LL H +IV GVC L +V EY + G
Sbjct: 44 DKMLVAVK-ALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHG 102
Query: 199 PLNRVLAGRKIRPDVLVDW-----------------AIQIAEGMNYLHCQAPISLIHRDL 241
LN+ L +LVD A QIA GM YL Q +HRDL
Sbjct: 103 DLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDL 159
Query: 242 KSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYA----WMAPEVIKTSI 297
+ N L+ + +KI DFG++R+VY T + G WM PE I
Sbjct: 160 ATRNCLVGANL--------LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRK 211
Query: 298 FSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEA 356
F+ SDVWS+GV+LWE+ T G+ P+ ++ ++ L P CP+ +M
Sbjct: 212 FTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRV-LERPRVCPKEVYDVMLG 270
Query: 357 CWEADSHMRPSFKTILKALNNI 378
CW+ + R + K I K L+ +
Sbjct: 271 CWQREPQQRLNIKEIYKILHAL 292
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 117/248 (47%), Gaps = 20/248 (8%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
K +VAIK E+ +E +++ H +V L GVCL+ +CLV E+ G
Sbjct: 29 KDKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC 86
Query: 200 LNRVLAGRK--IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDL 257
L+ L ++ + L+ + + EGM YL +IHRDL + N L+ E
Sbjct: 87 LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGEN------ 137
Query: 258 QFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWEL 314
+ +K++DFG+ R V + S+ GT W +PEV S +S SDVWS+GV++WE+
Sbjct: 138 --QVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 195
Query: 315 LT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILK 373
+ G+IPY++ L P +M CW+ RP+F +L+
Sbjct: 196 FSEGKIPYEN-RSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLR 254
Query: 374 ALNNIVHS 381
L I S
Sbjct: 255 QLAEIAES 262
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/254 (36%), Positives = 123/254 (48%), Gaps = 30/254 (11%)
Query: 133 VYKGIY--EKQEVAIKVA------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQ 184
VYKGI+ E + V I VA P N+ E ++ DH ++V L+GVCL
Sbjct: 31 VYKGIWVPEGETVKIPVAIKILNETTGPKANV--EFMDEALIMASMDHPHLVRLLGVCL- 87
Query: 185 SPKLCLVMEYARGGPLNRVLAGRK--IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLK 242
SP + LV + G L + K I +L++W +QIA+GM YL + L+HRDL
Sbjct: 88 SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLA 144
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLAR--EVYKTTHMSAAGTY--AWMAPEVIKTSIF 298
+ NVL+ P +KITDFGLAR E + + + G WMA E I F
Sbjct: 145 ARNVLVKSP--------NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF 196
Query: 299 SKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEAC 357
+ SDVWSYGV +WEL+T G PY I + LP P C +M C
Sbjct: 197 THQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGE-RLPQPPICTIDVYMVMVKC 255
Query: 358 WEADSHMRPSFKTI 371
W D+ RP FK +
Sbjct: 256 WMIDADSRPKFKEL 269
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 129/262 (49%), Gaps = 24/262 (9%)
Query: 132 KVYKGIY-----EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSP 186
+VY+G+Y EK VA+K + + E E ++ DH +IV LIG+ + P
Sbjct: 23 EVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP 82
Query: 187 KLCLVMEYARGGPLNRVLAGRK--IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSS 244
++ME G L L K ++ LV +++QI + M YL I+ +HRD+
Sbjct: 83 TW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVR 138
Query: 245 NVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKA 301
N+L++ P + +K+ DFGL+R + + A+ T WM+PE I F+ A
Sbjct: 139 NILVASP--------ECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 190
Query: 302 SDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEA 360
SDVW + V +WE+L+ G+ P+ + LP P CP + TLM CW+
Sbjct: 191 SDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD-RLPKPDLCPPVLYTLMTRCWDY 249
Query: 361 DSHMRPSFKTILKALNNIVHSE 382
D RP F ++ +L+++ E
Sbjct: 250 DPSDRPRFTELVCSLSDVYQME 271
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 116/248 (46%), Gaps = 20/248 (8%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
K +VAIK E+ +E +++ H +V L GVCL+ +CLV E+ G
Sbjct: 34 KDKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC 91
Query: 200 LNRVLAGRK--IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDL 257
L+ L ++ + L+ + + EGM YL +IHRDL + N L+ E
Sbjct: 92 LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGEN------ 142
Query: 258 QFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWEL 314
+ +K++DFG+ R V + S+ GT W +PEV S +S SDVWS+GV++WE+
Sbjct: 143 --QVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 200
Query: 315 LT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILK 373
+ G+IPY++ L P +M CW RP+F +L+
Sbjct: 201 FSEGKIPYEN-RSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLR 259
Query: 374 ALNNIVHS 381
L I S
Sbjct: 260 QLAEIAES 267
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 129/262 (49%), Gaps = 24/262 (9%)
Query: 132 KVYKGIY-----EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSP 186
+VY+G+Y EK VA+K + + E E ++ DH +IV LIG+ + P
Sbjct: 27 EVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP 86
Query: 187 KLCLVMEYARGGPLNRVLAGRK--IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSS 244
++ME G L L K ++ LV +++QI + M YL I+ +HRD+
Sbjct: 87 TW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVR 142
Query: 245 NVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKA 301
N+L++ P + +K+ DFGL+R + + A+ T WM+PE I F+ A
Sbjct: 143 NILVASP--------ECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 194
Query: 302 SDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEA 360
SDVW + V +WE+L+ G+ P+ + LP P CP + TLM CW+
Sbjct: 195 SDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD-RLPKPDLCPPVLYTLMTRCWDY 253
Query: 361 DSHMRPSFKTILKALNNIVHSE 382
D RP F ++ +L+++ E
Sbjct: 254 DPSDRPRFTELVCSLSDVYQME 275
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 129/262 (49%), Gaps = 24/262 (9%)
Query: 132 KVYKGIY-----EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSP 186
+VY+G+Y EK VA+K + + E E ++ DH +IV LIG+ + P
Sbjct: 39 EVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP 98
Query: 187 KLCLVMEYARGGPLNRVLAGRK--IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSS 244
++ME G L L K ++ LV +++QI + M YL I+ +HRD+
Sbjct: 99 TW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVR 154
Query: 245 NVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKA 301
N+L++ P + +K+ DFGL+R + + A+ T WM+PE I F+ A
Sbjct: 155 NILVASP--------ECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 206
Query: 302 SDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEA 360
SDVW + V +WE+L+ G+ P+ + LP P CP + TLM CW+
Sbjct: 207 SDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD-RLPKPDLCPPVLYTLMTRCWDY 265
Query: 361 DSHMRPSFKTILKALNNIVHSE 382
D RP F ++ +L+++ E
Sbjct: 266 DPSDRPRFTELVCSLSDVYQME 287
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/254 (36%), Positives = 123/254 (48%), Gaps = 30/254 (11%)
Query: 133 VYKGIY--EKQEVAIKVA------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQ 184
VYKGI+ E + V I VA P N+ E ++ DH ++V L+GVCL
Sbjct: 54 VYKGIWVPEGETVKIPVAIKILNETTGPKANV--EFMDEALIMASMDHPHLVRLLGVCL- 110
Query: 185 SPKLCLVMEYARGGPLNRVLAGRK--IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLK 242
SP + LV + G L + K I +L++W +QIA+GM YL + L+HRDL
Sbjct: 111 SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLA 167
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLAR--EVYKTTHMSAAGTY--AWMAPEVIKTSIF 298
+ NVL+ P +KITDFGLAR E + + + G WMA E I F
Sbjct: 168 ARNVLVKSP--------NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF 219
Query: 299 SKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEAC 357
+ SDVWSYGV +WEL+T G PY I + LP P C +M C
Sbjct: 220 THQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGE-RLPQPPICTIDVYMVMVKC 278
Query: 358 WEADSHMRPSFKTI 371
W D+ RP FK +
Sbjct: 279 WMIDADSRPKFKEL 292
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 122/265 (46%), Gaps = 41/265 (15%)
Query: 142 EVAIKVAHPNPDENILENVKQEGKLL-WLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL 200
+VA+K+ D + E + E K++ L H NIV+L+G C S + L+ EY G L
Sbjct: 77 QVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDL 136
Query: 201 NRVLAGRK------------------------IRPDVLVDWAIQIAEGMNYLHCQAPISL 236
L ++ + + L+ +A Q+A+GM +L + S
Sbjct: 137 LNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SC 193
Query: 237 IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEV 292
+HRDL + NVL++ K +KI DFGLAR++ ++ G WMAPE
Sbjct: 194 VHRDLAARNVLVTHG--------KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPES 245
Query: 293 IKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFK 351
+ I++ SDVWSYG++LWE+ + G PY I N + P +
Sbjct: 246 LFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIY 305
Query: 352 TLMEACWEADSHMRPSFKTILKALN 376
+M++CW DS RPSF + L
Sbjct: 306 IIMQSCWAFDSRKRPSFPNLTSFLG 330
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 116/248 (46%), Gaps = 20/248 (8%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
K +VAIK E+ +E +++ H +V L GVCL+ +CLV E+ G
Sbjct: 32 KDKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGC 89
Query: 200 LNRVLAGRK--IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDL 257
L+ L ++ + L+ + + EGM YL +IHRDL + N L+ E
Sbjct: 90 LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGEN------ 140
Query: 258 QFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWEL 314
+ +K++DFG+ R V + S+ GT W +PEV S +S SDVWS+GV++WE+
Sbjct: 141 --QVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 198
Query: 315 LT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILK 373
+ G+IPY++ L P +M CW RP+F +L+
Sbjct: 199 FSEGKIPYEN-RSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLR 257
Query: 374 ALNNIVHS 381
L I S
Sbjct: 258 QLAEIAES 265
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 119/249 (47%), Gaps = 22/249 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK E E ++ F+H NI+ L GV S + ++ E+ G L+
Sbjct: 47 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 106
Query: 203 VLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L + V LV IA GM YL A +S +HRDL + N+L+ N +L
Sbjct: 107 FLRLNDGQFTVIQLVGMLRGIASGMRYL---AEMSYVHRDLAARNILV-----NSNL--- 155
Query: 261 TLKITDFGLAR-------EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWE 313
K++DFGL+R + +T+ + W APE I F+ ASD WSYG+V+WE
Sbjct: 156 VCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWE 215
Query: 314 LLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTIL 372
+++ GE PY ++ + LP P CP LM CW+ D + RP F ++
Sbjct: 216 VMSFGERPYWDMSNQDVINAIEQD-YRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVV 274
Query: 373 KALNNIVHS 381
AL+ ++ +
Sbjct: 275 SALDKMIRN 283
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 121/249 (48%), Gaps = 22/249 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK E E ++ F+H NI+ L GV S + ++ E+ G L+
Sbjct: 45 VAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 104
Query: 203 VLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L + V LV IA GM YL A +S +HRDL + N+L+ N +L
Sbjct: 105 FLRLNDGQFTVIQLVGMLRGIASGMRYL---AEMSYVHRDLAARNILV-----NSNL--- 153
Query: 261 TLKITDFGLAREVYKT----THMSAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWE 313
K++DFGL+R + + T+ S+ G W APE I F+ ASD WSYG+V+WE
Sbjct: 154 VCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWE 213
Query: 314 LLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTIL 372
+++ GE PY ++ + LP P CP LM CW+ D + RP F ++
Sbjct: 214 VMSFGERPYWDMSNQDVINAIEQD-YRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVV 272
Query: 373 KALNNIVHS 381
AL+ ++ +
Sbjct: 273 SALDKMIRN 281
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 127/275 (46%), Gaps = 42/275 (15%)
Query: 135 KGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEY 194
KG VA+K+ N + L ++ E +L +H +++ L G C Q L L++EY
Sbjct: 48 KGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEY 107
Query: 195 ARGGPLNRVL-AGRKIRPDVL------------------------VDWAIQIAEGMNYLH 229
A+ G L L RK+ P L + +A QI++GM YL
Sbjct: 108 AKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL- 166
Query: 230 CQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK----TTHMSAAGTY 285
A +SL+HRDL + N+L++E + +KI+DFGL+R+VY+
Sbjct: 167 --AEMSLVHRDLAARNILVAEG--------RKMKISDFGLSRDVYEEDSXVKRSQGRIPV 216
Query: 286 AWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPS 344
WMA E + I++ SDVWS+GV+LWE++T G PY I + P
Sbjct: 217 KWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGH-RMERPD 275
Query: 345 TCPQLFKTLMEACWEADSHMRPSFKTILKALNNIV 379
C + LM CW+ + RP F I K L ++
Sbjct: 276 NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 119/230 (51%), Gaps = 32/230 (13%)
Query: 172 HRNIVSLIGVCLQ-SPKLCLVMEYARGGPLNRVLAGRK-------------IRPDVLVDW 217
H N+V+L+G C + L +++E+ + G L+ L ++ + + L+ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 218 AIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT 277
+ Q+A+GM +L A IHRDL + N+LLSE +KI DFGLAR++YK
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEK--------NVVKIXDFGLARDIYKDP 198
Query: 278 HMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXX 332
G WMAPE I +++ SDVWS+GV+LWE+ + G PY +
Sbjct: 199 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXR 258
Query: 333 XXXNKLTLPIPS-TCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ P T P++++T+++ CW + RP+F +++ L N++ +
Sbjct: 259 RLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLLQA 307
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 122/260 (46%), Gaps = 24/260 (9%)
Query: 133 VYKGIY------EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSP 186
VYKGI+ K VAIKV N + + E ++ + L+G+CL S
Sbjct: 33 VYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTST 92
Query: 187 KLCLVMEYARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSN 245
+ G L+ V R ++ L++W +QIA+GM+YL + L+HRDL + N
Sbjct: 93 VQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLE---DVRLVHRDLAARN 149
Query: 246 VLLSEPIENEDLQFKTLKITDFGLAR--EVYKTTHMSAAGTY--AWMAPEVIKTSIFSKA 301
VL+ P +KITDFGLAR ++ +T + + G WMA E I F+
Sbjct: 150 VLVKSP--------NHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQ 201
Query: 302 SDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEA 360
SDVWSYGV +WEL+T G PY I + LP P C +M CW
Sbjct: 202 SDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGE-RLPQPPICTIDVYMIMVKCWMI 260
Query: 361 DSHMRPSFKTILKALNNIVH 380
DS RP F+ ++ + +
Sbjct: 261 DSECRPRFRELVSEFSRMAR 280
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 126/267 (47%), Gaps = 25/267 (9%)
Query: 132 KVYKGIYEKQ-EVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCL 190
+V+ G Y +VA+K P ++ +E L+ H +V L V + + +
Sbjct: 28 EVWMGYYNNSTKVAVKTLKPGTMS--VQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYI 85
Query: 191 VMEYARGGPLNRVLA---GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+ EY G L L G K+ L+D++ QIAEGM Y+ + + IHRDL+++NVL
Sbjct: 86 ITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVL 142
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDV 304
+SE + KI DFGLAR + + + G W APE I F+ SDV
Sbjct: 143 VSESL--------MCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDV 194
Query: 305 WSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSH 363
WS+G++L+E++T G+IPY +P CP +M+ CW+ +
Sbjct: 195 WSFGILLYEIVTYGKIPYPG-RTNADVMTALSQGYRMPRVENCPDELYDIMKMCWKEKAE 253
Query: 364 MRPSF---KTILKALNNIVHSEFIQTP 387
RP+F +++L ++ Q P
Sbjct: 254 ERPTFDYLQSVLDDFYTATEGQYQQQP 280
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 117/248 (47%), Gaps = 20/248 (8%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
K +VAIK ++ +E +++ H +V L GVCL+ +CLV E+ G
Sbjct: 51 KDKVAIKTIKEGSMSE--DDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC 108
Query: 200 LNRVLAGRK--IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDL 257
L+ L ++ + L+ + + EGM YL +IHRDL + N L+ E
Sbjct: 109 LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGEN------ 159
Query: 258 QFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWEL 314
+ +K++DFG+ R V + S+ GT W +PEV S +S SDVWS+GV++WE+
Sbjct: 160 --QVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 217
Query: 315 LT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILK 373
+ G+IPY++ L P +M CW+ RP+F +L+
Sbjct: 218 FSEGKIPYEN-RSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLR 276
Query: 374 ALNNIVHS 381
L I S
Sbjct: 277 QLAEIAES 284
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 119/247 (48%), Gaps = 20/247 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK E + E ++ FDH NI+ L GV +S + +V E G L+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 203 VLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L + V LV IA GM YL + + +HRDL + N+L+ N +L
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILI-----NSNL--- 184
Query: 261 TLKITDFGLAREVY---KTTHMSAAGTYA--WMAPEVIKTSIFSKASDVWSYGVVLWELL 315
K++DFGL+R + + + + G W +PE I F+ ASDVWSYG+VLWE++
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 316 T-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKA 374
+ GE PY ++ LP P CP LM CW+ D + RP F+ I+
Sbjct: 245 SYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 375 LNNIVHS 381
L+ ++ +
Sbjct: 304 LDKLIRN 310
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 125/258 (48%), Gaps = 32/258 (12%)
Query: 143 VAIKVAHPN--PDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYA-RGGP 199
VA+K P+ +++ +E + DHRN++ L GV L +P + +V E A G
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSL 107
Query: 200 LNRVLAGRKIRPDVLVD----WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L+R+ RK + L+ +A+Q+AEGM YL + IHRDL + N+LL+
Sbjct: 108 LDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLA----TR 157
Query: 256 DLQFKTLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVV 310
DL +KI DFGL R + + +AW APE +KT FS ASD W +GV
Sbjct: 158 DL----VKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 213
Query: 311 LWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFK 369
LWE+ T G+ P+ +N LP P CPQ +M CW RP+F
Sbjct: 214 LWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 273
Query: 370 T----ILKALNNIVHSEF 383
+L+A + +EF
Sbjct: 274 ALRDFLLEAQPTDMRAEF 291
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 119/247 (48%), Gaps = 20/247 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK E + E ++ FDH NI+ L GV +S + +V E G L+
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 203 VLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L + V LV IA GM YL + + +HRDL + N+L+ N +L
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGAVHRDLAARNILI-----NSNL--- 184
Query: 261 TLKITDFGLAREVY---KTTHMSAAGTYA--WMAPEVIKTSIFSKASDVWSYGVVLWELL 315
K++DFGL+R + + + + G W +PE I F+ ASDVWSYG+VLWE++
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 316 T-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKA 374
+ GE PY ++ LP P CP LM CW+ D + RP F+ I+
Sbjct: 245 SYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 375 LNNIVHS 381
L+ ++ +
Sbjct: 304 LDKLIRN 310
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 121/236 (51%), Gaps = 32/236 (13%)
Query: 166 LLWLFDHRNIVSLIGVCLQ-SPKLCLVMEYARGGPLNRVLAGRK-------------IRP 211
L+ + H N+V+L+G C + L +++E+ + G L+ L ++ +
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTL 143
Query: 212 DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR 271
+ L+ ++ Q+A+GM +L A IHRDL + N+LLSE +KI DFGLAR
Sbjct: 144 EHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEK--------NVVKICDFGLAR 192
Query: 272 EVYKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINX 326
++YK G WMAPE I +++ SDVWS+GV+LWE+ + G PY +
Sbjct: 193 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 252
Query: 327 XXXXXXXXXNKLTLPIPS-TCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ P T P++++T+++ CW + RP+F +++ L N++ +
Sbjct: 253 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLLQA 307
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 122/240 (50%), Gaps = 36/240 (15%)
Query: 166 LLWLFDHRNIVSLIGVCLQ-SPKLCLVMEYARGGPLNRVLAGR-------KIRPDVL--- 214
L+ + H N+V+L+G C + L +++E+ + G L+ L + K+ P+ L
Sbjct: 121 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 180
Query: 215 -------VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDF 267
+ ++ Q+A+GM +L A IHRDL + N+LLSE +KI DF
Sbjct: 181 FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEK--------NVVKICDF 229
Query: 268 GLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYK 322
GLAR++YK G WMAPE I +++ SDVWS+GV+LWE+ + G PY
Sbjct: 230 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 289
Query: 323 SINXXXXXXXXXXNKLTLPIPS-TCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ + P T P++++T+++ CW + RP+F +++ L N++ +
Sbjct: 290 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLLQA 348
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 122/240 (50%), Gaps = 36/240 (15%)
Query: 166 LLWLFDHRNIVSLIGVCLQ-SPKLCLVMEYARGGPLNRVLAGR-------KIRPDVL--- 214
L+ + H N+V+L+G C + L +++E+ + G L+ L + K+ P+ L
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 143
Query: 215 -------VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDF 267
+ ++ Q+A+GM +L A IHRDL + N+LLSE +KI DF
Sbjct: 144 FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEK--------NVVKICDF 192
Query: 268 GLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYK 322
GLAR++YK G WMAPE I +++ SDVWS+GV+LWE+ + G PY
Sbjct: 193 GLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252
Query: 323 SINXXXXXXXXXXNKLTLPIPS-TCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ + P T P++++T+++ CW + RP+F +++ L N++ +
Sbjct: 253 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLLQA 311
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 118/247 (47%), Gaps = 20/247 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK E + E ++ FDH NI+ L GV +S + +V EY G L+
Sbjct: 53 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDT 112
Query: 203 VLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L + V LV I+ GM YL + + +HRDL + N+L+ N +L
Sbjct: 113 FLKKNDGQFTVIQLVGMLRGISAGMKYL---SDMGYVHRDLAARNILI-----NSNL--- 161
Query: 261 TLKITDFGLAREVY---KTTHMSAAGTYA--WMAPEVIKTSIFSKASDVWSYGVVLWELL 315
K++DFGL+R + + + + G W APE I F+ ASDVWSYG+V+WE++
Sbjct: 162 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVV 221
Query: 316 T-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKA 374
+ GE PY + LP P CP LM CW+ + + RP F I+
Sbjct: 222 SYGERPYWEMTNQDVIKAVEEG-YRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNM 280
Query: 375 LNNIVHS 381
L+ ++ +
Sbjct: 281 LDKLIRN 287
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 119/247 (48%), Gaps = 20/247 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK E + E ++ FDH NI+ L GV +S + +V E G L+
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 106
Query: 203 VLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L + V LV IA GM YL + + +HRDL + N+L+ N +L
Sbjct: 107 FLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILI-----NSNL--- 155
Query: 261 TLKITDFGLAREVY---KTTHMSAAGTYA--WMAPEVIKTSIFSKASDVWSYGVVLWELL 315
K++DFGL+R + + + + G W +PE I F+ ASDVWSYG+VLWE++
Sbjct: 156 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 215
Query: 316 T-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKA 374
+ GE PY ++ LP P CP LM CW+ D + RP F+ I+
Sbjct: 216 SYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 274
Query: 375 LNNIVHS 381
L+ ++ +
Sbjct: 275 LDKLIRN 281
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 122/240 (50%), Gaps = 36/240 (15%)
Query: 166 LLWLFDHRNIVSLIGVCLQ-SPKLCLVMEYARGGPLNRVLAGR-------KIRPDVL--- 214
L+ + H N+V+L+G C + L +++E+ + G L+ L + K+ P+ L
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 143
Query: 215 -------VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDF 267
+ ++ Q+A+GM +L A IHRDL + N+LLSE +KI DF
Sbjct: 144 FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEK--------NVVKICDF 192
Query: 268 GLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYK 322
GLAR++YK G WMAPE I +++ SDVWS+GV+LWE+ + G PY
Sbjct: 193 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252
Query: 323 SINXXXXXXXXXXNKLTLPIPS-TCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ + P T P++++T+++ CW + RP+F +++ L N++ +
Sbjct: 253 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLLQA 311
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 125/258 (48%), Gaps = 32/258 (12%)
Query: 143 VAIKVAHPN--PDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYA-RGGP 199
VA+K P+ +++ +E + DHRN++ L GV L +P + +V E A G
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSL 107
Query: 200 LNRVLAGRKIRPDVLVD----WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L+R+ RK + L+ +A+Q+AEGM YL + IHRDL + N+LL+
Sbjct: 108 LDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLA----TR 157
Query: 256 DLQFKTLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVV 310
DL +KI DFGL R + + +AW APE +KT FS ASD W +GV
Sbjct: 158 DL----VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 213
Query: 311 LWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFK 369
LWE+ T G+ P+ +N LP P CPQ +M CW RP+F
Sbjct: 214 LWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 273
Query: 370 T----ILKALNNIVHSEF 383
+L+A + +EF
Sbjct: 274 ALRDFLLEAQPTDMRAEF 291
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 117/239 (48%), Gaps = 28/239 (11%)
Query: 143 VAIKVAHPN--PDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYA-RGGP 199
VA+K P+ +++ +E + DHRN++ L GV L +P + +V E A G
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSL 97
Query: 200 LNRVLAGRKIRPDVLVD----WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L+R+ RK + L+ +A+Q+AEGM YL + IHRDL + N+LL+
Sbjct: 98 LDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLA----TR 147
Query: 256 DLQFKTLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVV 310
DL +KI DFGL R + + +AW APE +KT FS ASD W +GV
Sbjct: 148 DL----VKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 203
Query: 311 LWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
LWE+ T G+ P+ +N LP P CPQ +M CW RP+F
Sbjct: 204 LWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 262
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 126/275 (45%), Gaps = 42/275 (15%)
Query: 135 KGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEY 194
KG VA+K+ N + L ++ E +L +H +++ L G C Q L L++EY
Sbjct: 48 KGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEY 107
Query: 195 ARGGPLNRVL-AGRKIRPDVL------------------------VDWAIQIAEGMNYLH 229
A+ G L L RK+ P L + +A QI++GM YL
Sbjct: 108 AKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL- 166
Query: 230 CQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK----TTHMSAAGTY 285
A + L+HRDL + N+L++E + +KI+DFGL+R+VY+
Sbjct: 167 --AEMKLVHRDLAARNILVAEG--------RKMKISDFGLSRDVYEEDSYVKRSQGRIPV 216
Query: 286 AWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPS 344
WMA E + I++ SDVWS+GV+LWE++T G PY I + P
Sbjct: 217 KWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGH-RMERPD 275
Query: 345 TCPQLFKTLMEACWEADSHMRPSFKTILKALNNIV 379
C + LM CW+ + RP F I K L ++
Sbjct: 276 NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 117/239 (48%), Gaps = 28/239 (11%)
Query: 143 VAIKVAHPN--PDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYA-RGGP 199
VA+K P+ +++ +E + DHRN++ L GV L +P + +V E A G
Sbjct: 43 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSL 101
Query: 200 LNRVLAGRKIRPDVLVD----WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L+R+ RK + L+ +A+Q+AEGM YL + IHRDL + N+LL+
Sbjct: 102 LDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLA----TR 151
Query: 256 DLQFKTLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVV 310
DL +KI DFGL R + + +AW APE +KT FS ASD W +GV
Sbjct: 152 DL----VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 207
Query: 311 LWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
LWE+ T G+ P+ +N LP P CPQ +M CW RP+F
Sbjct: 208 LWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 266
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 126/275 (45%), Gaps = 42/275 (15%)
Query: 135 KGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEY 194
KG VA+K+ N + L ++ E +L +H +++ L G C Q L L++EY
Sbjct: 48 KGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEY 107
Query: 195 ARGGPLNRVL-AGRKIRPDVL------------------------VDWAIQIAEGMNYLH 229
A+ G L L RK+ P L + +A QI++GM YL
Sbjct: 108 AKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL- 166
Query: 230 CQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK----TTHMSAAGTY 285
A + L+HRDL + N+L++E + +KI+DFGL+R+VY+
Sbjct: 167 --AEMKLVHRDLAARNILVAEG--------RKMKISDFGLSRDVYEEDSXVKRSQGRIPV 216
Query: 286 AWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPS 344
WMA E + I++ SDVWS+GV+LWE++T G PY I + P
Sbjct: 217 KWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGH-RMERPD 275
Query: 345 TCPQLFKTLMEACWEADSHMRPSFKTILKALNNIV 379
C + LM CW+ + RP F I K L ++
Sbjct: 276 NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 105/226 (46%), Gaps = 22/226 (9%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDV--------L 214
E ++ F+H+NIV IGV LQS ++ME GG L L + RP L
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+ A IA G YL IHRD+ + N LL+ P + KI DFG+AR++Y
Sbjct: 158 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPG-----RVAKIGDFGMARDIY 209
Query: 275 KTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXX 329
+ ++ G WM PE IF+ +D WS+GV+LWE+ + G +PY S +
Sbjct: 210 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV 269
Query: 330 XXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
P P CP +M CW+ RP+F IL+ +
Sbjct: 270 LEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 121/240 (50%), Gaps = 36/240 (15%)
Query: 166 LLWLFDHRNIVSLIGVCLQ-SPKLCLVMEYARGGPLNRVLAGR-------KIRPDVL--- 214
L+ + H N+V+L+G C + L ++ E+ + G L+ L + K+ P+ L
Sbjct: 75 LIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 134
Query: 215 -------VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDF 267
+ ++ Q+A+GM +L A IHRDL + N+LLSE +KI DF
Sbjct: 135 FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEK--------NVVKICDF 183
Query: 268 GLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYK 322
GLAR++YK G WMAPE I +++ SDVWS+GV+LWE+ + G PY
Sbjct: 184 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 243
Query: 323 SINXXXXXXXXXXNKLTLPIPS-TCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ + P T P++++T+++ CW + RP+F +++ L N++ +
Sbjct: 244 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLLQA 302
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 105/226 (46%), Gaps = 22/226 (9%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDV--------L 214
E ++ F+H+NIV IGV LQS ++ME GG L L + RP L
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+ A IA G YL IHRD+ + N LL+ P + KI DFG+AR++Y
Sbjct: 143 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPG-----RVAKIGDFGMARDIY 194
Query: 275 KTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXX 329
+ ++ G WM PE IF+ +D WS+GV+LWE+ + G +PY S +
Sbjct: 195 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV 254
Query: 330 XXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
P P CP +M CW+ RP+F IL+ +
Sbjct: 255 LEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 117/239 (48%), Gaps = 28/239 (11%)
Query: 143 VAIKVAHPN--PDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYA-RGGP 199
VA+K P+ +++ +E + DHRN++ L GV L +P + +V E A G
Sbjct: 43 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSL 101
Query: 200 LNRVLAGRKIRPDVLVD----WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L+R+ RK + L+ +A+Q+AEGM YL + IHRDL + N+LL+
Sbjct: 102 LDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLA----TR 151
Query: 256 DLQFKTLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVV 310
DL +KI DFGL R + + +AW APE +KT FS ASD W +GV
Sbjct: 152 DL----VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 207
Query: 311 LWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
LWE+ T G+ P+ +N LP P CPQ +M CW RP+F
Sbjct: 208 LWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 266
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 117/239 (48%), Gaps = 28/239 (11%)
Query: 143 VAIKVAHPN--PDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYA-RGGP 199
VA+K P+ +++ +E + DHRN++ L GV L +P + +V E A G
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSL 97
Query: 200 LNRVLAGRKIRPDVLVD----WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L+R+ RK + L+ +A+Q+AEGM YL + IHRDL + N+LL+
Sbjct: 98 LDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLA----TR 147
Query: 256 DLQFKTLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVV 310
DL +KI DFGL R + + +AW APE +KT FS ASD W +GV
Sbjct: 148 DL----VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 203
Query: 311 LWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
LWE+ T G+ P+ +N LP P CPQ +M CW RP+F
Sbjct: 204 LWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 262
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 121/240 (50%), Gaps = 36/240 (15%)
Query: 166 LLWLFDHRNIVSLIGVCLQ-SPKLCLVMEYARGGPLNRVLAGR-------KIRPDVL--- 214
L+ + H N+V+L+G C + L ++ E+ + G L+ L + K+ P+ L
Sbjct: 75 LIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 134
Query: 215 -------VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDF 267
+ ++ Q+A+GM +L A IHRDL + N+LLSE +KI DF
Sbjct: 135 FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEK--------NVVKICDF 183
Query: 268 GLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYK 322
GLAR++YK G WMAPE I +++ SDVWS+GV+LWE+ + G PY
Sbjct: 184 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 243
Query: 323 SINXXXXXXXXXXNKLTLPIPS-TCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ + P T P++++T+++ CW + RP+F +++ L N++ +
Sbjct: 244 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLLQA 302
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 117/239 (48%), Gaps = 28/239 (11%)
Query: 143 VAIKVAHPN--PDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYA-RGGP 199
VA+K P+ +++ +E + DHRN++ L GV L +P + +V E A G
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSL 97
Query: 200 LNRVLAGRKIRPDVLVD----WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L+R+ RK + L+ +A+Q+AEGM YL + IHRDL + N+LL+
Sbjct: 98 LDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLA----TR 147
Query: 256 DLQFKTLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVV 310
DL +KI DFGL R + + +AW APE +KT FS ASD W +GV
Sbjct: 148 DL----VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT 203
Query: 311 LWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
LWE+ T G+ P+ +N LP P CPQ +M CW RP+F
Sbjct: 204 LWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 262
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 121/240 (50%), Gaps = 36/240 (15%)
Query: 166 LLWLFDHRNIVSLIGVCLQ-SPKLCLVMEYARGGPLNRVLAGRK---------------- 208
L+ + H N+V+L+G C + L +++E+ + G L+ L ++
Sbjct: 86 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKD 145
Query: 209 -IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDF 267
+ + L+ ++ Q+A+GM +L A IHRDL + N+LLSE +KI DF
Sbjct: 146 FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEK--------NVVKICDF 194
Query: 268 GLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYK 322
GLAR++YK G WMAPE I +++ SDVWS+GV+LWE+ + G PY
Sbjct: 195 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 254
Query: 323 SINXXXXXXXXXXNKLTLPIPS-TCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ + P T P++++T+++ CW + RP+F +++ L N++ +
Sbjct: 255 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLLQA 313
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 124/256 (48%), Gaps = 32/256 (12%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 28 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 83
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDL 241
L S + G L+ V + I L++W +QIAEGMNYL + L+HRDL
Sbjct: 84 LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDR---RLVHRDL 140
Query: 242 KSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTSI 297
+ NVL+ P + +KITDFGLA+ + K H WMA E I I
Sbjct: 141 AARNVLVKTP--------QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 192
Query: 298 FSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEA 356
++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 193 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMVK 251
Query: 357 CWEADSHMRPSFKTIL 372
CW D+ RP F+ ++
Sbjct: 252 CWMIDADSRPKFRELI 267
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 112/247 (45%), Gaps = 22/247 (8%)
Query: 142 EVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLN 201
+VA+K E + E ++ F+H+NIV IGV LQS +++E GG L
Sbjct: 89 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 148
Query: 202 RVLAGRKIRPDV--------LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L + RP L+ A IA G YL IHRD+ + N LL+ P
Sbjct: 149 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 205
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGV 309
+ KI DFG+AR++Y+ ++ G WM PE IF+ +D WS+GV
Sbjct: 206 G-----RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 260
Query: 310 VLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+LWE+ + G +PY S + P P CP +M CW+ RP+F
Sbjct: 261 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNF 319
Query: 369 KTILKAL 375
IL+ +
Sbjct: 320 AIILERI 326
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 134/281 (47%), Gaps = 39/281 (13%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 38 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 93
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGRK--IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRD 240
L S + L+M+ G L + K I L++W +QIA+GMNYL + L+HRD
Sbjct: 94 LTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRD 149
Query: 241 LKSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTS 296
L + NVL+ P + +KITDFGLA+ + K H WMA E I
Sbjct: 150 LAARNVLVKTP--------QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 201
Query: 297 IFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLME 355
I++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 202 IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMV 260
Query: 356 ACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQD 396
CW D+ RP F+ ++ I S+ + P I D
Sbjct: 261 KCWMIDADSRPKFRELI-----IEFSKMARDPQRYLVIQGD 296
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 134/281 (47%), Gaps = 39/281 (13%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 35 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 90
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGRK--IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRD 240
L S + L+M+ G L + K I L++W +QIA+GMNYL + L+HRD
Sbjct: 91 LTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRD 146
Query: 241 LKSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTS 296
L + NVL+ P + +KITDFGLA+ + K H WMA E I
Sbjct: 147 LAARNVLVKTP--------QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 198
Query: 297 IFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLME 355
I++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 199 IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMV 257
Query: 356 ACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQD 396
CW D+ RP F+ ++ I S+ + P I D
Sbjct: 258 KCWMIDADSRPKFRELI-----IEFSKMARDPQRYLVIQGD 293
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 131/280 (46%), Gaps = 37/280 (13%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 34 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 89
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDL 241
L S + G L+ V + I L++W +QIA+GMNYL + L+HRDL
Sbjct: 90 LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDL 146
Query: 242 KSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTSI 297
+ NVL+ P + +KITDFGLA+ + K H WMA E I I
Sbjct: 147 AARNVLVKTP--------QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 298 FSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEA 356
++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMRK 257
Query: 357 CWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQD 396
CW D+ RP F+ ++ I S+ + P I D
Sbjct: 258 CWMIDADSRPKFRELI-----IEFSKMARDPQRYLVIQGD 292
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 131/280 (46%), Gaps = 37/280 (13%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 41 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 96
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDL 241
L S + G L+ V + I L++W +QIA+GMNYL + L+HRDL
Sbjct: 97 LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDL 153
Query: 242 KSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTSI 297
+ NVL+ P + +KITDFGLA+ + K H WMA E I I
Sbjct: 154 AARNVLVKTP--------QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 205
Query: 298 FSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEA 356
++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 206 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMRK 264
Query: 357 CWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQD 396
CW D+ RP F+ ++ I S+ + P I D
Sbjct: 265 CWMIDADSRPKFRELI-----IEFSKMARDPQRYLVIQGD 299
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 127/257 (49%), Gaps = 34/257 (13%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 32 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 87
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGRK--IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRD 240
L S + L+M+ G L + K I L++W +QIA+GMNYL + L+HRD
Sbjct: 88 LTS-TVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRD 143
Query: 241 LKSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTS 296
L + NVL+ P + +KITDFGLA+ + K H WMA E I
Sbjct: 144 LAARNVLVKTP--------QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 195
Query: 297 IFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLME 355
I++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 196 IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMV 254
Query: 356 ACWEADSHMRPSFKTIL 372
CW D+ RP F+ ++
Sbjct: 255 KCWMIDADSRPKFRELI 271
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 122/254 (48%), Gaps = 34/254 (13%)
Query: 142 EVAIKV----AHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARG 197
+VA+K+ AH + E ++ +K + L H NIV+L+G C + ++ EY
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELK---IMSHLGQHENIVNLLGACTHGGPVLVITEYCCY 134
Query: 198 GPLNRVLA-----------GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNV 246
G L L GR + L+ ++ Q+A+GM +L A + IHRD+ + NV
Sbjct: 135 GDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNV 191
Query: 247 LLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFSKAS 302
LL+ KI DFGLAR++ ++ G WMAPE I +++ S
Sbjct: 192 LLTNG--------HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS 243
Query: 303 DVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEAD 361
DVWSYG++LWE+ + G PY I + + P+ P+ ++M+ACW +
Sbjct: 244 DVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALE 303
Query: 362 SHMRPSFKTILKAL 375
RP+F+ I L
Sbjct: 304 PTHRPTFQQICSFL 317
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 134/281 (47%), Gaps = 39/281 (13%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 33 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 88
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGRK--IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRD 240
L S + L+M+ G L + K I L++W +QIA+GMNYL + L+HRD
Sbjct: 89 LTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRD 144
Query: 241 LKSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTS 296
L + NVL+ P + +KITDFGLA+ + K H WMA E I
Sbjct: 145 LAARNVLVKTP--------QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 297 IFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLME 355
I++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 197 IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMV 255
Query: 356 ACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQD 396
CW D+ RP F+ ++ I S+ + P I D
Sbjct: 256 KCWMIDADSRPKFRELI-----IEFSKMARDPQRYLVIQGD 291
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 134/281 (47%), Gaps = 39/281 (13%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 32 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 87
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGRK--IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRD 240
L S + L+M+ G L + K I L++W +QIA+GMNYL + L+HRD
Sbjct: 88 LTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRD 143
Query: 241 LKSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTS 296
L + NVL+ P + +KITDFGLA+ + K H WMA E I
Sbjct: 144 LAARNVLVKTP--------QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 195
Query: 297 IFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLME 355
I++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 196 IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMV 254
Query: 356 ACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQD 396
CW D+ RP F+ ++ I S+ + P I D
Sbjct: 255 KCWMIDADSRPKFRELI-----IEFSKMARDPQRYLVIQGD 290
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 113/235 (48%), Gaps = 20/235 (8%)
Query: 153 DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA-GRKIRP 211
D + + + E ++ D+ IV +IG+C ++ LVME A GPLN+ L R ++
Sbjct: 410 DPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD 468
Query: 212 DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR 271
+++ Q++ GM YL + +HRDL + NVLL + KI+DFGL++
Sbjct: 469 KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLL--------VTQHYAKISDFGLSK 517
Query: 272 EVYKTTHMSAAGTYA-----WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSIN 325
+ + A T+ W APE I FS SDVWS+GV++WE + G+ PY+ +
Sbjct: 518 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 577
Query: 326 XXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVH 380
+ + P+ CP+ LM CW D RP F + L N +
Sbjct: 578 GSEVTAMLEKGE-RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 113/235 (48%), Gaps = 20/235 (8%)
Query: 153 DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA-GRKIRP 211
D + + + E ++ D+ IV +IG+C ++ LVME A GPLN+ L R ++
Sbjct: 411 DPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD 469
Query: 212 DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR 271
+++ Q++ GM YL + +HRDL + NVLL + KI+DFGL++
Sbjct: 470 KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLL--------VTQHYAKISDFGLSK 518
Query: 272 EVYKTTHMSAAGTYA-----WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSIN 325
+ + A T+ W APE I FS SDVWS+GV++WE + G+ PY+ +
Sbjct: 519 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 578
Query: 326 XXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVH 380
+ + P+ CP+ LM CW D RP F + L N +
Sbjct: 579 GSEVTAMLEKGE-RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 632
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 109/225 (48%), Gaps = 20/225 (8%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA-GRKIRPDVLVDWAIQI 221
E ++ D+ IV +IG+C ++ LVME A GPLN+ L R ++ +++ Q+
Sbjct: 78 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 136
Query: 222 AEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA 281
+ GM YL + +HRDL + NVLL + KI+DFGL++ + +
Sbjct: 137 SMGMKYLE---ESNFVHRDLAARNVLL--------VTQHYAKISDFGLSKALRADENYYK 185
Query: 282 AGTYA-----WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXX 335
A T+ W APE I FS SDVWS+GV++WE + G+ PY+ +
Sbjct: 186 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 245
Query: 336 NKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVH 380
+ + P+ CP+ LM CW D RP F + L N +
Sbjct: 246 GE-RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 289
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 109/225 (48%), Gaps = 20/225 (8%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA-GRKIRPDVLVDWAIQI 221
E ++ D+ IV +IG+C ++ LVME A GPLN+ L R ++ +++ Q+
Sbjct: 78 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 136
Query: 222 AEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA 281
+ GM YL + +HRDL + NVLL + KI+DFGL++ + +
Sbjct: 137 SMGMKYLE---ESNFVHRDLAARNVLL--------VTQHYAKISDFGLSKALRADENYYK 185
Query: 282 AGTYA-----WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXX 335
A T+ W APE I FS SDVWS+GV++WE + G+ PY+ +
Sbjct: 186 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 245
Query: 336 NKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVH 380
+ + P+ CP+ LM CW D RP F + L N +
Sbjct: 246 GE-RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 289
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 105/226 (46%), Gaps = 22/226 (9%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDV--------L 214
E ++ F+H+NIV IGV LQS +++E GG L L + RP L
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+ A IA G YL IHRD+ + N LL+ P + KI DFG+AR++Y
Sbjct: 158 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPG-----RVAKIGDFGMARDIY 209
Query: 275 KTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXX 329
+ ++ G WM PE IF+ +D WS+GV+LWE+ + G +PY S +
Sbjct: 210 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV 269
Query: 330 XXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
P P CP +M CW+ RP+F IL+ +
Sbjct: 270 LEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 117/247 (47%), Gaps = 20/247 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK + + E ++ FDH NI+ L GV + + ++ EY G L+
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 119
Query: 203 VLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L R V LV I GM YL + +S +HRDL + N+L+ N +L
Sbjct: 120 FLRKNDGRFTVIQLVGMLRGIGSGMKYL---SDMSAVHRDLAARNILV-----NSNL--- 168
Query: 261 TLKITDFGLAREVY---KTTHMSAAGTYA--WMAPEVIKTSIFSKASDVWSYGVVLWELL 315
K++DFG++R + + + + G W APE I F+ ASDVWSYG+V+WE++
Sbjct: 169 VCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 228
Query: 316 T-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKA 374
+ GE PY ++ LP P CP LM CW+ + RP F I+
Sbjct: 229 SYGERPYWDMSNQDVIKAIEEG-YRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNM 287
Query: 375 LNNIVHS 381
L+ ++ +
Sbjct: 288 LDKLIRN 294
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 112/247 (45%), Gaps = 22/247 (8%)
Query: 142 EVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLN 201
+VA+K E + E ++ F+H+NIV IGV LQS +++E GG L
Sbjct: 63 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 122
Query: 202 RVLAGRKIRPDV--------LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L + RP L+ A IA G YL IHRD+ + N LL+ P
Sbjct: 123 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 179
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGV 309
+ KI DFG+AR++Y+ ++ G WM PE IF+ +D WS+GV
Sbjct: 180 G-----RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 234
Query: 310 VLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+LWE+ + G +PY S + P P CP +M CW+ RP+F
Sbjct: 235 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNF 293
Query: 369 KTILKAL 375
IL+ +
Sbjct: 294 AIILERI 300
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 134/281 (47%), Gaps = 39/281 (13%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 31 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 86
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGRK--IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRD 240
L S + L+M+ G L + K I L++W +QIA+GMNYL + L+HRD
Sbjct: 87 LTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRD 142
Query: 241 LKSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTS 296
L + NVL+ P + +KITDFGLA+ + K H WMA E I
Sbjct: 143 LAARNVLVKTP--------QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 297 IFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLME 355
I++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMV 253
Query: 356 ACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQD 396
CW D+ RP F+ ++ I S+ + P I D
Sbjct: 254 KCWMIDADSRPKFRELI-----IEFSKMARDPQRYLVIQGD 289
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 120/256 (46%), Gaps = 21/256 (8%)
Query: 133 VYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK-LCLV 191
V G Y +VA+K ++ + E ++ H N+V L+GV ++ L +V
Sbjct: 28 VMLGDYRGNKVAVKCIK---NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 84
Query: 192 MEYARGGPLNRVLAGRK---IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
EY G L L R + D L+ +++ + E M YL + +HRDL + NVL+
Sbjct: 85 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLV 141
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYG 308
SE K++DFGL +E +T + W APE ++ + FS SDVWS+G
Sbjct: 142 SED--------NVAKVSDFGLTKEA-SSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFG 192
Query: 309 VVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPS 367
++LWE+ + G +PY I + P CP +M+ CW D+ MRPS
Sbjct: 193 ILLWEIYSFGRVPYPRIPLKDVVPRVEKG-YKMDAPDGCPPAVYEVMKNCWHLDAAMRPS 251
Query: 368 FKTILKALNNIVHSEF 383
F + + L +I E
Sbjct: 252 FLQLREQLEHIKTHEL 267
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 127/257 (49%), Gaps = 34/257 (13%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 34 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 89
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGRK--IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRD 240
L S + L+M+ G L + K I L++W +QIA+GMNYL + L+HRD
Sbjct: 90 LTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRD 145
Query: 241 LKSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTS 296
L + NVL+ P + +KITDFGLA+ + K H WMA E I
Sbjct: 146 LAARNVLVKTP--------QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 297 IFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLME 355
I++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 198 IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMV 256
Query: 356 ACWEADSHMRPSFKTIL 372
CW D+ RP F+ ++
Sbjct: 257 KCWMIDADSRPKFRELI 273
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 112/247 (45%), Gaps = 22/247 (8%)
Query: 142 EVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLN 201
+VA+K E + E ++ F+H+NIV IGV LQS +++E GG L
Sbjct: 69 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 128
Query: 202 RVLAGRKIRPDV--------LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L + RP L+ A IA G YL IHRD+ + N LL+ P
Sbjct: 129 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 185
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGV 309
+ KI DFG+AR++Y+ ++ G WM PE IF+ +D WS+GV
Sbjct: 186 G-----RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 240
Query: 310 VLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+LWE+ + G +PY S + P P CP +M CW+ RP+F
Sbjct: 241 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNF 299
Query: 369 KTILKAL 375
IL+ +
Sbjct: 300 AIILERI 306
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 112/247 (45%), Gaps = 22/247 (8%)
Query: 142 EVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLN 201
+VA+K E + E ++ F+H+NIV IGV LQS +++E GG L
Sbjct: 79 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 138
Query: 202 RVLAGRKIRPDV--------LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L + RP L+ A IA G YL IHRD+ + N LL+ P
Sbjct: 139 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 195
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGV 309
+ KI DFG+AR++Y+ ++ G WM PE IF+ +D WS+GV
Sbjct: 196 G-----RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 250
Query: 310 VLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+LWE+ + G +PY S + P P CP +M CW+ RP+F
Sbjct: 251 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNF 309
Query: 369 KTILKAL 375
IL+ +
Sbjct: 310 AIILERI 316
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 122/254 (48%), Gaps = 34/254 (13%)
Query: 142 EVAIKV----AHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARG 197
+VA+K+ AH + E ++ +K + L H NIV+L+G C + ++ EY
Sbjct: 70 KVAVKMLKSTAHADEKEALMSELK---IMSHLGQHENIVNLLGACTHGGPVLVITEYCCY 126
Query: 198 GPLNRVLA-----------GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNV 246
G L L GR + L+ ++ Q+A+GM +L A + IHRD+ + NV
Sbjct: 127 GDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNV 183
Query: 247 LLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFSKAS 302
LL+ KI DFGLAR++ ++ G WMAPE I +++ S
Sbjct: 184 LLTNG--------HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS 235
Query: 303 DVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEAD 361
DVWSYG++LWE+ + G PY I + + P+ P+ ++M+ACW +
Sbjct: 236 DVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALE 295
Query: 362 SHMRPSFKTILKAL 375
RP+F+ I L
Sbjct: 296 PTHRPTFQQICSFL 309
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 109/225 (48%), Gaps = 20/225 (8%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA-GRKIRPDVLVDWAIQI 221
E ++ D+ IV +IG+C ++ LVME A GPLN+ L R ++ +++ Q+
Sbjct: 76 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 134
Query: 222 AEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA 281
+ GM YL + +HRDL + NVLL + KI+DFGL++ + +
Sbjct: 135 SMGMKYLE---ESNFVHRDLAARNVLL--------VTQHYAKISDFGLSKALRADENYYK 183
Query: 282 AGTYA-----WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXX 335
A T+ W APE I FS SDVWS+GV++WE + G+ PY+ +
Sbjct: 184 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 243
Query: 336 NKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVH 380
+ + P+ CP+ LM CW D RP F + L N +
Sbjct: 244 GE-RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 287
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 124/256 (48%), Gaps = 32/256 (12%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 31 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 86
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDL 241
L S + G L+ V + I L++W +QIA+GMNYL + L+HRDL
Sbjct: 87 LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDL 143
Query: 242 KSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTSI 297
+ NVL+ P + +KITDFGLA+ + K H WMA E I I
Sbjct: 144 AARNVLVKTP--------QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 298 FSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEA 356
++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMRK 254
Query: 357 CWEADSHMRPSFKTIL 372
CW D+ RP F+ ++
Sbjct: 255 CWMIDADSRPKFRELI 270
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 117/247 (47%), Gaps = 20/247 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK + + E ++ FDH NI+ L GV + + ++ EY G L+
Sbjct: 45 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 104
Query: 203 VLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L R V LV I GM YL + +S +HRDL + N+L+ N +L
Sbjct: 105 FLRKNDGRFTVIQLVGMLRGIGSGMKYL---SDMSYVHRDLAARNILV-----NSNL--- 153
Query: 261 TLKITDFGLAREVY---KTTHMSAAGTYA--WMAPEVIKTSIFSKASDVWSYGVVLWELL 315
K++DFG++R + + + + G W APE I F+ ASDVWSYG+V+WE++
Sbjct: 154 VCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 213
Query: 316 T-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKA 374
+ GE PY ++ LP P CP LM CW+ + RP F I+
Sbjct: 214 SYGERPYWDMSNQDVIKAIEEG-YRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNM 272
Query: 375 LNNIVHS 381
L+ ++ +
Sbjct: 273 LDKLIRN 279
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 105/226 (46%), Gaps = 22/226 (9%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDV--------L 214
E ++ F+H+NIV IGV LQS +++E GG L L + RP L
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+ A IA G YL IHRD+ + N LL+ P + KI DFG+AR++Y
Sbjct: 143 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPG-----RVAKIGDFGMARDIY 194
Query: 275 KTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXX 329
+ ++ G WM PE IF+ +D WS+GV+LWE+ + G +PY S +
Sbjct: 195 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV 254
Query: 330 XXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
P P CP +M CW+ RP+F IL+ +
Sbjct: 255 LEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 109/225 (48%), Gaps = 20/225 (8%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA-GRKIRPDVLVDWAIQI 221
E ++ D+ IV +IG+C ++ LVME A GPLN+ L R ++ +++ Q+
Sbjct: 68 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 126
Query: 222 AEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA 281
+ GM YL + +HRDL + NVLL + KI+DFGL++ + +
Sbjct: 127 SMGMKYLE---ESNFVHRDLAARNVLL--------VTQHYAKISDFGLSKALRADENYYK 175
Query: 282 AGTYA-----WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXX 335
A T+ W APE I FS SDVWS+GV++WE + G+ PY+ +
Sbjct: 176 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 235
Query: 336 NKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVH 380
+ + P+ CP+ LM CW D RP F + L N +
Sbjct: 236 GE-RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 279
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 112/247 (45%), Gaps = 22/247 (8%)
Query: 142 EVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLN 201
+VA+K E + E ++ F+H+NIV IGV LQS +++E GG L
Sbjct: 54 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 113
Query: 202 RVLAGRKIRPDV--------LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L + RP L+ A IA G YL IHRD+ + N LL+ P
Sbjct: 114 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 170
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGV 309
+ KI DFG+AR++Y+ ++ G WM PE IF+ +D WS+GV
Sbjct: 171 G-----RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 225
Query: 310 VLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+LWE+ + G +PY S + P P CP +M CW+ RP+F
Sbjct: 226 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNF 284
Query: 369 KTILKAL 375
IL+ +
Sbjct: 285 AIILERI 291
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 36/258 (13%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLL-WLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLN 201
VA+K+ P+ E + E K+L +L +H NIV+L+G C ++ EY G L
Sbjct: 74 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 133
Query: 202 RVLAGR-------KIRPDVLV------------DWAIQIAEGMNYLHCQAPISLIHRDLK 242
L + K P ++ ++ Q+A+GM +L A + IHRDL
Sbjct: 134 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLA 190
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIF 298
+ N+LL+ + KI DFGLAR++ ++ G WMAPE I ++
Sbjct: 191 ARNILLTHG--------RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVY 242
Query: 299 SKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEAC 357
+ SDVWSYG+ LWEL + G PY + + P P +M+ C
Sbjct: 243 TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTC 302
Query: 358 WEADSHMRPSFKTILKAL 375
W+AD RP+FK I++ +
Sbjct: 303 WDADPLKRPTFKQIVQLI 320
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 117/247 (47%), Gaps = 20/247 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK + + E ++ FDH NI+ L GV + + ++ EY G L+
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 98
Query: 203 VLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L R V LV I GM YL + +S +HRDL + N+L+ N +L
Sbjct: 99 FLRKNDGRFTVIQLVGMLRGIGSGMKYL---SDMSYVHRDLAARNILV-----NSNL--- 147
Query: 261 TLKITDFGLAREVY---KTTHMSAAGTYA--WMAPEVIKTSIFSKASDVWSYGVVLWELL 315
K++DFG++R + + + + G W APE I F+ ASDVWSYG+V+WE++
Sbjct: 148 VCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 207
Query: 316 T-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKA 374
+ GE PY ++ LP P CP LM CW+ + RP F I+
Sbjct: 208 SYGERPYWDMSNQDVIKAIEEG-YRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNM 266
Query: 375 LNNIVHS 381
L+ ++ +
Sbjct: 267 LDKLIRN 273
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 131/280 (46%), Gaps = 37/280 (13%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 33 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 88
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDL 241
L S + G L+ V + I L++W +QIA+GMNYL + L+HRDL
Sbjct: 89 LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDL 145
Query: 242 KSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTSI 297
+ NVL+ P + +KITDFGLA+ + K H WMA E I I
Sbjct: 146 AARNVLVKTP--------QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 298 FSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEA 356
++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMVK 256
Query: 357 CWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQD 396
CW D+ RP F+ ++ I S+ + P I D
Sbjct: 257 CWMIDADSRPKFRELI-----IEFSKMARDPQRYLVIQGD 291
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 36/258 (13%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLL-WLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLN 201
VA+K+ P+ E + E K+L +L +H NIV+L+G C ++ EY G L
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 202 RVLAGR-------KIRPDVLV------------DWAIQIAEGMNYLHCQAPISLIHRDLK 242
L + K P ++ ++ Q+A+GM +L A + IHRDL
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLA 195
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIF 298
+ N+LL+ + KI DFGLAR++ ++ G WMAPE I ++
Sbjct: 196 ARNILLTHG--------RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVY 247
Query: 299 SKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEAC 357
+ SDVWSYG+ LWEL + G PY + + P P +M+ C
Sbjct: 248 TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTC 307
Query: 358 WEADSHMRPSFKTILKAL 375
W+AD RP+FK I++ +
Sbjct: 308 WDADPLKRPTFKQIVQLI 325
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 131/280 (46%), Gaps = 37/280 (13%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 38 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 93
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDL 241
L S + G L+ V + I L++W +QIA+GMNYL + L+HRDL
Sbjct: 94 LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDL 150
Query: 242 KSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTSI 297
+ NVL+ P + +KITDFGLA+ + K H WMA E I I
Sbjct: 151 AARNVLVKTP--------QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 298 FSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEA 356
++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMVK 261
Query: 357 CWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQD 396
CW D+ RP F+ ++ I S+ + P I D
Sbjct: 262 CWMIDADSRPKFRELI-----IEFSKMARDPQRYLVIQGD 296
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 36/258 (13%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLL-WLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLN 201
VA+K+ P+ E + E K+L +L +H NIV+L+G C ++ EY G L
Sbjct: 72 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 131
Query: 202 RVLAGR-------KIRPDVLV------------DWAIQIAEGMNYLHCQAPISLIHRDLK 242
L + K P ++ ++ Q+A+GM +L A + IHRDL
Sbjct: 132 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLA 188
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIF 298
+ N+LL+ + KI DFGLAR++ ++ G WMAPE I ++
Sbjct: 189 ARNILLTHG--------RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVY 240
Query: 299 SKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEAC 357
+ SDVWSYG+ LWEL + G PY + + P P +M+ C
Sbjct: 241 TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTC 300
Query: 358 WEADSHMRPSFKTILKAL 375
W+AD RP+FK I++ +
Sbjct: 301 WDADPLKRPTFKQIVQLI 318
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 109/225 (48%), Gaps = 20/225 (8%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA-GRKIRPDVLVDWAIQI 221
E ++ D+ IV +IG+C ++ LVME A GPLN+ L R ++ +++ Q+
Sbjct: 62 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 120
Query: 222 AEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA 281
+ GM YL + +HRDL + NVLL + KI+DFGL++ + +
Sbjct: 121 SMGMKYLE---ESNFVHRDLAARNVLL--------VTQHYAKISDFGLSKALRADENYYK 169
Query: 282 AGTYA-----WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXX 335
A T+ W APE I FS SDVWS+GV++WE + G+ PY+ +
Sbjct: 170 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 229
Query: 336 NKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVH 380
+ + P+ CP+ LM CW D RP F + L N +
Sbjct: 230 GE-RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 273
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 131/280 (46%), Gaps = 37/280 (13%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 56 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 111
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDL 241
L S + G L+ V + I L++W +QIA+GMNYL + L+HRDL
Sbjct: 112 LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDL 168
Query: 242 KSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTSI 297
+ NVL+ P + +KITDFGLA+ + K H WMA E I I
Sbjct: 169 AARNVLVKTP--------QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 220
Query: 298 FSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEA 356
++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 221 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMVK 279
Query: 357 CWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQD 396
CW D+ RP F+ ++ I S+ + P I D
Sbjct: 280 CWMIDADSRPKFRELI-----IEFSKMARDPQRYLVIQGD 314
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 131/280 (46%), Gaps = 37/280 (13%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 38 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 93
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDL 241
L S + G L+ V + I L++W +QIA+GMNYL + L+HRDL
Sbjct: 94 LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDL 150
Query: 242 KSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTSI 297
+ NVL+ P + +KITDFGLA+ + K H WMA E I I
Sbjct: 151 AARNVLVKTP--------QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 298 FSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEA 356
++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMVK 261
Query: 357 CWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQD 396
CW D+ RP F+ ++ I S+ + P I D
Sbjct: 262 CWMIDADSRPKFRELI-----IEFSKMARDPQRYLVIQGD 296
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 109/225 (48%), Gaps = 20/225 (8%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA-GRKIRPDVLVDWAIQI 221
E ++ D+ IV +IG+C ++ LVME A GPLN+ L R ++ +++ Q+
Sbjct: 62 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 120
Query: 222 AEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA 281
+ GM YL + +HRDL + NVLL + KI+DFGL++ + +
Sbjct: 121 SMGMKYLE---ESNFVHRDLAARNVLL--------VTQHYAKISDFGLSKALRADENXYK 169
Query: 282 AGTYA-----WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXX 335
A T+ W APE I FS SDVWS+GV++WE + G+ PY+ +
Sbjct: 170 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 229
Query: 336 NKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVH 380
+ + P+ CP+ LM CW D RP F + L N +
Sbjct: 230 GE-RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 273
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 131/280 (46%), Gaps = 37/280 (13%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 65 VYKGLWIPEGEKVKIPVAIMELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 120
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDL 241
L S + G L+ V + I L++W +QIA+GMNYL + L+HRDL
Sbjct: 121 LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDL 177
Query: 242 KSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTSI 297
+ NVL+ P + +KITDFGLA+ + K H WMA E I I
Sbjct: 178 AARNVLVKTP--------QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 229
Query: 298 FSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEA 356
++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 230 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMVK 288
Query: 357 CWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQD 396
CW D+ RP F+ ++ I S+ + P I D
Sbjct: 289 CWMIDADSRPKFRELI-----IEFSKMARDPQRYLVIQGD 323
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 131/280 (46%), Gaps = 37/280 (13%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 31 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 86
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDL 241
L S + G L+ V + I L++W +QIA+GMNYL + L+HRDL
Sbjct: 87 LTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDL 143
Query: 242 KSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTSI 297
+ NVL+ P + +KITDFGLA+ + K H WMA E I I
Sbjct: 144 AARNVLVKTP--------QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 298 FSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEA 356
++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMVK 254
Query: 357 CWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQD 396
CW D+ RP F+ ++ I S+ + P I D
Sbjct: 255 CWMIDADSRPKFRELI-----IEFSKMARDPQRYLVIQGD 289
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 36/258 (13%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLL-WLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLN 201
VA+K+ P+ E + E K+L +L +H NIV+L+G C ++ EY G L
Sbjct: 56 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 115
Query: 202 RVLAGR-------KIRPDVLV------------DWAIQIAEGMNYLHCQAPISLIHRDLK 242
L + K P ++ ++ Q+A+GM +L A + IHRDL
Sbjct: 116 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLA 172
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIF 298
+ N+LL+ + KI DFGLAR++ ++ G WMAPE I ++
Sbjct: 173 ARNILLTHG--------RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVY 224
Query: 299 SKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEAC 357
+ SDVWSYG+ LWEL + G PY + + P P +M+ C
Sbjct: 225 TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTC 284
Query: 358 WEADSHMRPSFKTILKAL 375
W+AD RP+FK I++ +
Sbjct: 285 WDADPLKRPTFKQIVQLI 302
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 131/280 (46%), Gaps = 37/280 (13%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 34 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 89
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDL 241
L S + G L+ V + I L++W +QIA+GMNYL + L+HRDL
Sbjct: 90 LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDL 146
Query: 242 KSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTSI 297
+ NVL+ P + +KITDFGLA+ + K H WMA E I I
Sbjct: 147 AARNVLVKTP--------QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 298 FSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEA 356
++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMVK 257
Query: 357 CWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQD 396
CW D+ RP F+ ++ I S+ + P I D
Sbjct: 258 CWMIDADSRPKFRELI-----IEFSKMARDPQRYLVIQGD 292
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 109/225 (48%), Gaps = 20/225 (8%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA-GRKIRPDVLVDWAIQI 221
E ++ D+ IV +IG+C ++ LVME A GPLN+ L R ++ +++ Q+
Sbjct: 56 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 114
Query: 222 AEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA 281
+ GM YL + +HRDL + NVLL + KI+DFGL++ + +
Sbjct: 115 SMGMKYLE---ESNFVHRDLAARNVLL--------VTQHYAKISDFGLSKALRADENYYK 163
Query: 282 AGTYA-----WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXX 335
A T+ W APE I FS SDVWS+GV++WE + G+ PY+ +
Sbjct: 164 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 223
Query: 336 NKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVH 380
+ + P+ CP+ LM CW D RP F + L N +
Sbjct: 224 GE-RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 267
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 109/225 (48%), Gaps = 20/225 (8%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA-GRKIRPDVLVDWAIQI 221
E ++ D+ IV +IG+C ++ LVME A GPLN+ L R ++ +++ Q+
Sbjct: 58 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 116
Query: 222 AEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA 281
+ GM YL + +HRDL + NVLL + KI+DFGL++ + +
Sbjct: 117 SMGMKYLE---ESNFVHRDLAARNVLL--------VTQHYAKISDFGLSKALRADENYYK 165
Query: 282 AGTYA-----WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXX 335
A T+ W APE I FS SDVWS+GV++WE + G+ PY+ +
Sbjct: 166 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 225
Query: 336 NKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVH 380
+ + P+ CP+ LM CW D RP F + L N +
Sbjct: 226 GE-RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 269
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 124/256 (48%), Gaps = 32/256 (12%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 37 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 92
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDL 241
L S + G L+ V + I L++W +QIA+GMNYL + L+HRDL
Sbjct: 93 LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDL 149
Query: 242 KSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTSI 297
+ NVL+ P + +KITDFGLA+ + K H WMA E I I
Sbjct: 150 AARNVLVKTP--------QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 201
Query: 298 FSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEA 356
++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 202 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMVK 260
Query: 357 CWEADSHMRPSFKTIL 372
CW D+ RP F+ ++
Sbjct: 261 CWMIDADSRPKFRELI 276
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 131/280 (46%), Gaps = 37/280 (13%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 34 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 89
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDL 241
L S + G L+ V + I L++W +QIA+GMNYL + L+HRDL
Sbjct: 90 LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDL 146
Query: 242 KSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTSI 297
+ NVL+ P + +KITDFGLA+ + K H WMA E I I
Sbjct: 147 AARNVLVKTP--------QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 298 FSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEA 356
++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMVK 257
Query: 357 CWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQD 396
CW D+ RP F+ ++ I S+ + P I D
Sbjct: 258 CWMIDADSRPKFRELI-----IEFSKMARDPQRYLVIQGD 292
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 124/256 (48%), Gaps = 32/256 (12%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 25 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 80
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDL 241
L S + G L+ V + I L++W +QIA+GMNYL + L+HRDL
Sbjct: 81 LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDL 137
Query: 242 KSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTSI 297
+ NVL+ P + +KITDFGLA+ + K H WMA E I I
Sbjct: 138 AARNVLVKTP--------QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 189
Query: 298 FSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEA 356
++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 190 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMVK 248
Query: 357 CWEADSHMRPSFKTIL 372
CW D+ RP F+ ++
Sbjct: 249 CWMIDADSRPKFRELI 264
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 124/256 (48%), Gaps = 32/256 (12%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 31 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 86
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDL 241
L S + G L+ V + I L++W +QIA+GMNYL + L+HRDL
Sbjct: 87 LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDL 143
Query: 242 KSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTSI 297
+ NVL+ P + +KITDFGLA+ + K H WMA E I I
Sbjct: 144 AARNVLVKTP--------QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 298 FSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEA 356
++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMVK 254
Query: 357 CWEADSHMRPSFKTIL 372
CW D+ RP F+ ++
Sbjct: 255 CWMIDADSRPKFRELI 270
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 131/280 (46%), Gaps = 37/280 (13%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 31 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 86
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDL 241
L S + G L+ V + I L++W +QIA+GMNYL + L+HRDL
Sbjct: 87 LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDL 143
Query: 242 KSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTSI 297
+ NVL+ P + +KITDFGLA+ + K H WMA E I I
Sbjct: 144 AARNVLVKTP--------QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 298 FSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEA 356
++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMVK 254
Query: 357 CWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQD 396
CW D+ RP F+ ++ I S+ + P I D
Sbjct: 255 CWMIDADSRPKFRELI-----IEFSKMARDPQRYLVIQGD 289
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 111/247 (44%), Gaps = 22/247 (8%)
Query: 142 EVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLN 201
+VA+K E + E ++ F+H+NIV IGV LQS +++E GG L
Sbjct: 80 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 139
Query: 202 RVLAGRKIRPDV--------LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L + RP L+ A IA G YL IHRD+ + N LL+ P
Sbjct: 140 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 196
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGV 309
+ KI DFG+AR++Y+ + G WM PE IF+ +D WS+GV
Sbjct: 197 G-----RVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 251
Query: 310 VLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+LWE+ + G +PY S + P P CP +M CW+ RP+F
Sbjct: 252 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNF 310
Query: 369 KTILKAL 375
IL+ +
Sbjct: 311 AIILERI 317
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 111/247 (44%), Gaps = 22/247 (8%)
Query: 142 EVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLN 201
+VA+K E + E ++ F+H+NIV IGV LQS +++E GG L
Sbjct: 103 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 162
Query: 202 RVLAGRKIRPDV--------LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L + RP L+ A IA G YL IHRD+ + N LL+ P
Sbjct: 163 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 219
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGV 309
+ KI DFG+AR++Y+ + G WM PE IF+ +D WS+GV
Sbjct: 220 G-----RVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 274
Query: 310 VLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+LWE+ + G +PY S + P P CP +M CW+ RP+F
Sbjct: 275 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNF 333
Query: 369 KTILKAL 375
IL+ +
Sbjct: 334 AIILERI 340
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 126/267 (47%), Gaps = 25/267 (9%)
Query: 132 KVYKGIYEKQ-EVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCL 190
+V+ G Y +VA+K P ++ +E L+ H +V L V + + +
Sbjct: 27 EVWMGYYNNSTKVAVKTLKPGTMS--VQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYI 84
Query: 191 VMEYARGGPLNRVLA---GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+ E+ G L L G K+ L+D++ QIAEGM Y+ + + IHRDL+++NVL
Sbjct: 85 ITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVL 141
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDV 304
+SE + KI DFGLAR + + + G W APE I F+ S+V
Sbjct: 142 VSESL--------MCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNV 193
Query: 305 WSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSH 363
WS+G++L+E++T G+IPY +P CP +M+ CW+ +
Sbjct: 194 WSFGILLYEIVTYGKIPYPG-RTNADVMSALSQGYRMPRMENCPDELYDIMKMCWKEKAE 252
Query: 364 MRPSF---KTILKALNNIVHSEFIQTP 387
RP+F +++L ++ Q P
Sbjct: 253 ERPTFDYLQSVLDDFYTATEGQYQQQP 279
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 119/256 (46%), Gaps = 21/256 (8%)
Query: 133 VYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK-LCLV 191
V G Y +VA+K ++ + E ++ H N+V L+GV ++ L +V
Sbjct: 37 VMLGDYRGNKVAVKCIK---NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 93
Query: 192 MEYARGGPLNRVLAGRK---IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
EY G L L R + D L+ +++ + E M YL + +HRDL + NVL+
Sbjct: 94 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLV 150
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYG 308
SE K++DFGL +E +T + W APE ++ FS SDVWS+G
Sbjct: 151 SED--------NVAKVSDFGLTKEA-SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFG 201
Query: 309 VVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPS 367
++LWE+ + G +PY I + P CP +M+ CW D+ MRPS
Sbjct: 202 ILLWEIYSFGRVPYPRIPLKDVVPRVEKG-YKMDAPDGCPPAVYEVMKNCWHLDAAMRPS 260
Query: 368 FKTILKALNNIVHSEF 383
F + + L +I E
Sbjct: 261 FLQLREQLEHIKTHEL 276
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 133/281 (47%), Gaps = 39/281 (13%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 33 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 88
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGRK--IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRD 240
L S + L+M+ G L + K I L++W +QIA+GMNYL + L+HRD
Sbjct: 89 LTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRD 144
Query: 241 LKSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTS 296
L + NVL+ P + +KITDFG A+ + K H WMA E I
Sbjct: 145 LAARNVLVKTP--------QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 297 IFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLME 355
I++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 197 IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMR 255
Query: 356 ACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQD 396
CW D+ RP F+ ++ I S+ + P I D
Sbjct: 256 KCWMIDADSRPKFRELI-----IEFSKMARDPQRYLVIQGD 291
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 120/238 (50%), Gaps = 34/238 (14%)
Query: 166 LLWLFDHRNIVSLIGVCLQ-SPKLCLVMEYARGGPLNRVLAGRK---------------I 209
L+ + H N+V+L+G C + L +++E+ + G L+ L ++ +
Sbjct: 86 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFL 145
Query: 210 RPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGL 269
+ L+ ++ Q+A+GM +L A IHRDL + N+LLSE +KI DFGL
Sbjct: 146 TLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEK--------NVVKICDFGL 194
Query: 270 AREVYKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSI 324
AR++ K G WMAPE I +++ SDVWS+GV+LWE+ + G PY +
Sbjct: 195 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254
Query: 325 NXXXXXXXXXXNKLTLPIPS-TCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ P T P++++T+++ CW + RP+F +++ L N++ +
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLLQA 311
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 119/256 (46%), Gaps = 21/256 (8%)
Query: 133 VYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK-LCLV 191
V G Y +VA+K ++ + E ++ H N+V L+GV ++ L +V
Sbjct: 22 VMLGDYRGNKVAVKCIK---NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 78
Query: 192 MEYARGGPLNRVLAGRK---IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
EY G L L R + D L+ +++ + E M YL + +HRDL + NVL+
Sbjct: 79 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLV 135
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYG 308
SE K++DFGL +E +T + W APE ++ FS SDVWS+G
Sbjct: 136 SED--------NVAKVSDFGLTKEA-SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFG 186
Query: 309 VVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPS 367
++LWE+ + G +PY I + P CP +M+ CW D+ MRPS
Sbjct: 187 ILLWEIYSFGRVPYPRIPLKDVVPRVEKG-YKMDAPDGCPPAVYEVMKNCWHLDAAMRPS 245
Query: 368 FKTILKALNNIVHSEF 383
F + + L +I E
Sbjct: 246 FLQLREQLEHIKTHEL 261
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 119/258 (46%), Gaps = 36/258 (13%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLL-WLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLN 201
VA+K+ P+ E + E K+L +L +H NIV+L+G C ++ EY G L
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 202 RVLAGR-------KIRPDVLV------------DWAIQIAEGMNYLHCQAPISLIHRDLK 242
L + K P ++ ++ Q+A+GM +L A + IHRDL
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLA 195
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIF 298
+ N+LL+ + KI DFGLAR + ++ G WMAPE I ++
Sbjct: 196 ARNILLTHG--------RITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVY 247
Query: 299 SKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEAC 357
+ SDVWSYG+ LWEL + G PY + + P P +M+ C
Sbjct: 248 TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTC 307
Query: 358 WEADSHMRPSFKTILKAL 375
W+AD RP+FK I++ +
Sbjct: 308 WDADPLKRPTFKQIVQLI 325
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 114/246 (46%), Gaps = 22/246 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK P E QE +++ H +V L V + P + +VMEY G L
Sbjct: 45 VAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVMEYMSKGCLLD 101
Query: 203 VL---AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQF 259
L G+ +R LVD A QIA GM Y+ ++ +HRDL+++N+L+ E +
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENL------- 151
Query: 260 KTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
K+ DFGLAR + + + G W APE F+ SDVWS+G++L EL T
Sbjct: 152 -VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
Query: 317 -GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
G +PY + +P P CP+ LM CW D RP+F+ + L
Sbjct: 211 KGRVPYPGM-VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 269
Query: 376 NNIVHS 381
+ S
Sbjct: 270 EDYFTS 275
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 121/240 (50%), Gaps = 36/240 (15%)
Query: 166 LLWLFDHRNIVSLIGVCLQ-SPKLCLVMEYARGGPLNRVLAGR-------KIRPDVL--- 214
L+ + H N+V+L+G C + L +++E+ + G L+ L + K+ P+ L
Sbjct: 75 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 134
Query: 215 -------VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDF 267
+ ++ Q+A+GM +L A IHRDL + N+LLSE +KI DF
Sbjct: 135 FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEK--------NVVKICDF 183
Query: 268 GLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYK 322
GLAR++ K G WMAPE I +++ SDVWS+GV+LWE+ + G PY
Sbjct: 184 GLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 243
Query: 323 SINXXXXXXXXXXNKLTLPIPS-TCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ + P T P++++T+++ CW + RP+F +++ L N++ +
Sbjct: 244 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLLQA 302
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 121/240 (50%), Gaps = 36/240 (15%)
Query: 166 LLWLFDHRNIVSLIGVCLQ-SPKLCLVMEYARGGPLNRVLAGR-------KIRPDVL--- 214
L+ + H N+V+L+G C + L +++E+ + G L+ L + K+ P+ L
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 143
Query: 215 -------VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDF 267
+ ++ Q+A+GM +L A IHRDL + N+LLSE +KI DF
Sbjct: 144 FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEK--------NVVKICDF 192
Query: 268 GLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYK 322
GLAR++ K G WMAPE I +++ SDVWS+GV+LWE+ + G PY
Sbjct: 193 GLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252
Query: 323 SINXXXXXXXXXXNKLTLPIPS-TCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ + P T P++++T+++ CW + RP+F +++ L N++ +
Sbjct: 253 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLLQA 311
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 121/263 (46%), Gaps = 35/263 (13%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC--LQSPKLCLVMEYARGGPL 200
VA+K + KQE +L H +I+ G C + L LVMEY G L
Sbjct: 63 VAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSL 122
Query: 201 NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L I L+ +A QI EGM YLH Q IHRDL + NVLL +N+ L
Sbjct: 123 RDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLL----DNDRL--- 172
Query: 261 TLKITDFGLAR------EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWEL 314
+KI DFGLA+ E Y+ + + W APE +K F ASDVWS+GV L+EL
Sbjct: 173 -VKIGDFGLAKAVPEGHEXYRVREDGDSPVF-WYAPECLKEYKFYYASDVWSFGVTLYEL 230
Query: 315 LT-----GEIPYKSINXXXXXXXXXXN-KLT--------LPIPSTCPQLFKTLMEACWEA 360
LT P K + +LT LP P CP LM+ CWE
Sbjct: 231 LTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWET 290
Query: 361 DSHMRPSFKTILKALNNIVHSEF 383
++ RP+F+ ++ L VH ++
Sbjct: 291 EASFRPTFENLIPILKT-VHEKY 312
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 112/247 (45%), Gaps = 22/247 (8%)
Query: 142 EVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLN 201
+VA+K E + E ++ F+H+NIV IGV LQS +++E GG L
Sbjct: 63 QVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 122
Query: 202 RVLAGRKIRPDV--------LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L + RP L+ A IA G YL IHRD+ + N LL+ P
Sbjct: 123 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 179
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGV 309
+ KI DFG+A+++Y+ ++ G WM PE IF+ +D WS+GV
Sbjct: 180 G-----RVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 234
Query: 310 VLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+LWE+ + G +PY S + P P CP +M CW+ RP+F
Sbjct: 235 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNF 293
Query: 369 KTILKAL 375
IL+ +
Sbjct: 294 AIILERI 300
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 133/281 (47%), Gaps = 39/281 (13%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 33 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 88
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGRK--IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRD 240
L S + L+M+ G L + K I L++W +QIA+GMNYL + L+HRD
Sbjct: 89 LTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRD 144
Query: 241 LKSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTS 296
L + NVL+ P + +KITDFG A+ + K H WMA E I
Sbjct: 145 LAARNVLVKTP--------QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 297 IFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLME 355
I++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 197 IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMV 255
Query: 356 ACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQD 396
CW D+ RP F+ ++ I S+ + P I D
Sbjct: 256 KCWMIDADSRPKFRELI-----IEFSKMARDPQRYLVIQGD 291
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 124/258 (48%), Gaps = 38/258 (14%)
Query: 142 EVAIKV----AHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARG 197
+VA+K+ AH + E ++ +K + L H NIV+L+G C + ++ EY
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELK---IMSHLGQHENIVNLLGACTHGGPVLVITEYCCY 134
Query: 198 GPL-------NRVL--------AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLK 242
G L +RVL A + L+ ++ Q+A+GM +L A + IHRD+
Sbjct: 135 GDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVA 191
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIF 298
+ NVLL+ KI DFGLAR++ ++ G WMAPE I ++
Sbjct: 192 ARNVLLTNG--------HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY 243
Query: 299 SKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEAC 357
+ SDVWSYG++LWE+ + G PY I + + P+ P+ ++M+AC
Sbjct: 244 TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQAC 303
Query: 358 WEADSHMRPSFKTILKAL 375
W + RP+F+ I L
Sbjct: 304 WALEPTHRPTFQQICSFL 321
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 133/281 (47%), Gaps = 39/281 (13%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 35 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 90
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGRK--IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRD 240
L S + L+M+ G L + K I L++W +QIA+GMNYL + L+HRD
Sbjct: 91 LTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRD 146
Query: 241 LKSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTS 296
L + NVL+ P + +KITDFG A+ + K H WMA E I
Sbjct: 147 LAARNVLVKTP--------QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 198
Query: 297 IFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLME 355
I++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 199 IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMV 257
Query: 356 ACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQD 396
CW D+ RP F+ ++ I S+ + P I D
Sbjct: 258 KCWMIDADSRPKFRELI-----IEFSKMARDPQRYLVIQGD 293
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 120/240 (50%), Gaps = 36/240 (15%)
Query: 166 LLWLFDHRNIVSLIGVCLQ-SPKLCLVMEYARGGPLNRVLAGR-------KIRPDVL--- 214
L+ + H N+V+L+G C + L ++ E+ + G L+ L + K+ P+ L
Sbjct: 75 LIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 134
Query: 215 -------VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDF 267
+ ++ Q+A+GM +L A IHRDL + N+LLSE +KI DF
Sbjct: 135 FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEK--------NVVKICDF 183
Query: 268 GLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYK 322
GLAR++ K G WMAPE I +++ SDVWS+GV+LWE+ + G PY
Sbjct: 184 GLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 243
Query: 323 SINXXXXXXXXXXNKLTLPIPS-TCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ + P T P++++T+++ CW + RP+F +++ L N++ +
Sbjct: 244 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLLQA 302
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 120/239 (50%), Gaps = 35/239 (14%)
Query: 166 LLWLFDHRNIVSLIGVCLQ-SPKLCLVMEYARGGPLNRVLAGRK---------------- 208
L+ + H N+V+L+G C + L +++E+ + G L+ L ++
Sbjct: 85 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDF 144
Query: 209 IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFG 268
+ + L+ ++ Q+A+GM +L A IHRDL + N+LLSE +KI DFG
Sbjct: 145 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEK--------NVVKICDFG 193
Query: 269 LAREVYKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKS 323
LAR++ K G WMAPE I +++ SDVWS+GV+LWE+ + G PY
Sbjct: 194 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Query: 324 INXXXXXXXXXXNKLTLPIPS-TCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ + P T P++++T+++ CW + RP+F +++ L N++ +
Sbjct: 254 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLLQA 311
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 130/280 (46%), Gaps = 37/280 (13%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 33 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 88
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDL 241
L S + G L+ V + I L++W +QIA+GMNYL + L+HRDL
Sbjct: 89 LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDL 145
Query: 242 KSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTSI 297
+ NVL+ P + +KITDFG A+ + K H WMA E I I
Sbjct: 146 AARNVLVKTP--------QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 298 FSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEA 356
++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMRK 256
Query: 357 CWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQD 396
CW D+ RP F+ ++ I S+ + P I D
Sbjct: 257 CWMIDADSRPKFRELI-----IEFSKMARDPQRYLVIQGD 291
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 111/247 (44%), Gaps = 22/247 (8%)
Query: 142 EVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLN 201
+VA+K E + E ++ +H+NIV IGV LQS +++E GG L
Sbjct: 63 QVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 122
Query: 202 RVLAGRKIRPDV--------LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L + RP L+ A IA G YL IHRD+ + N LL+ P
Sbjct: 123 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGP 179
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGV 309
+ KI DFG+AR++Y+ ++ G WM PE IF+ +D WS+GV
Sbjct: 180 G-----RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 234
Query: 310 VLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+LWE+ + G +PY S + P P CP +M CW+ RP+F
Sbjct: 235 LLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNF 293
Query: 369 KTILKAL 375
IL+ +
Sbjct: 294 AIILERI 300
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 104/226 (46%), Gaps = 22/226 (9%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDV--------L 214
E ++ +H+NIV IGV LQS +++E GG L L + RP L
Sbjct: 98 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+ A IA G YL IHRD+ + N LL+ P + KI DFG+AR++Y
Sbjct: 158 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPG-----RVAKIGDFGMARDIY 209
Query: 275 KTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXX 329
+ ++ G WM PE IF+ +D WS+GV+LWE+ + G +PY S +
Sbjct: 210 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV 269
Query: 330 XXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
P P CP +M CW+ RP+F IL+ +
Sbjct: 270 LEFVTSGGRMDP-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 114/246 (46%), Gaps = 22/246 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK P E QE +++ H +V L V + P + +V+EY G L
Sbjct: 45 VAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVIEYMSKGSLLD 101
Query: 203 VL---AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQF 259
L G+ +R LVD A QIA GM Y+ ++ +HRDL+++N+L+ E +
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENL------- 151
Query: 260 KTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
K+ DFGLAR + + + G W APE F+ SDVWS+G++L EL T
Sbjct: 152 -VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
Query: 317 -GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
G +PY + +P P CP+ LM CW D RP+F+ + L
Sbjct: 211 KGRVPYPGM-VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 269
Query: 376 NNIVHS 381
+ S
Sbjct: 270 EDYFTS 275
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 123/257 (47%), Gaps = 33/257 (12%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQS------PKLCLVMEYARGGPLNRVLAGRKIR 210
+E +E + FDH ++ L+GV L+S P +++ + + G L+ L +I
Sbjct: 69 IEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIG 128
Query: 211 PD-------VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLK 263
+ LV + + IA GM YL + + IHRDL + N +L+E + T+
Sbjct: 129 ENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDM--------TVC 177
Query: 264 ITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GE 318
+ DFGL+R++Y + W+A E + ++++ SDVW++GV +WE++T G+
Sbjct: 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQ 237
Query: 319 IPYKSI-NXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNN 377
PY I N N+L P C + LM CW AD RPSF + L N
Sbjct: 238 TPYAGIENAEIYNYLIGGNRLKQ--PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELEN 295
Query: 378 IV-HSEFIQTPHESFHI 393
I+ H + T + +I
Sbjct: 296 ILGHLSVLSTSQDPLYI 312
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 123/258 (47%), Gaps = 38/258 (14%)
Query: 142 EVAIKV----AHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARG 197
+VA+K+ AH + E ++ +K + L H NIV+L+G C + ++ EY
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELK---IMSHLGQHENIVNLLGACTHGGPVLVITEYCCY 134
Query: 198 GPL-------NRVL--------AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLK 242
G L +RVL A L+ ++ Q+A+GM +L A + IHRD+
Sbjct: 135 GDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVA 191
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIKTSIF 298
+ NVLL+ KI DFGLAR++ ++ G WMAPE I ++
Sbjct: 192 ARNVLLTNG--------HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY 243
Query: 299 SKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEAC 357
+ SDVWSYG++LWE+ + G PY I + + P+ P+ ++M+AC
Sbjct: 244 TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQAC 303
Query: 358 WEADSHMRPSFKTILKAL 375
W + RP+F+ I L
Sbjct: 304 WALEPTHRPTFQQICSFL 321
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 130/280 (46%), Gaps = 37/280 (13%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 38 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 93
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDL 241
L S + G L+ V + I L++W +QIA+GMNYL + L+HRDL
Sbjct: 94 LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDL 150
Query: 242 KSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTSI 297
+ NVL+ P + +KITDFG A+ + K H WMA E I I
Sbjct: 151 AARNVLVKTP--------QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 298 FSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEA 356
++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMVK 261
Query: 357 CWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQD 396
CW D+ RP F+ ++ I S+ + P I D
Sbjct: 262 CWMIDADSRPKFRELI-----IEFSKMARDPQRYLVIQGD 296
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 130/280 (46%), Gaps = 37/280 (13%)
Query: 133 VYKGIY--EKQEVAIKVA--------HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVC 182
VYKG++ E ++V I VA P ++ IL+ E ++ D+ ++ L+G+C
Sbjct: 31 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD----EAYVMASVDNPHVCRLLGIC 86
Query: 183 LQSPKLCLVMEYARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDL 241
L S + G L+ V + I L++W +QIA+GMNYL + L+HRDL
Sbjct: 87 LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDL 143
Query: 242 KSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSAAGT-YAWMAPEVIKTSI 297
+ NVL+ P + +KITDFG A+ + K H WMA E I I
Sbjct: 144 AARNVLVKTP--------QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 298 FSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEA 356
++ SDVWSYGV +WEL+T G PY I + LP P C +M
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMVK 254
Query: 357 CWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQD 396
CW D+ RP F+ ++ I S+ + P I D
Sbjct: 255 CWMIDADSRPKFRELI-----IEFSKMARDPQRYLVIQGD 289
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 113/246 (45%), Gaps = 22/246 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK P E QE +++ H +V L V + P + +V EY G L
Sbjct: 45 VAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLD 101
Query: 203 VLAG---RKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQF 259
L G + +R LVD A QIA GM Y+ ++ +HRDL+++N+L+ E +
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENL------- 151
Query: 260 KTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
K+ DFGLAR + + + G W APE F+ SDVWS+G++L EL T
Sbjct: 152 -VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
Query: 317 -GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
G +PY + +P P CP+ LM CW D RP+F+ + L
Sbjct: 211 KGRVPYPGM-VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 269
Query: 376 NNIVHS 381
+ S
Sbjct: 270 EDYFTS 275
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 114/243 (46%), Gaps = 22/243 (9%)
Query: 142 EVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLN 201
+VAIK P E+ +E +++ H +V L V + P + +V EY G L
Sbjct: 35 KVAIKTLKPGTMSP--ESFLEEAQIMKKLKHDKLVQLYAVVSEEP-IYIVTEYMNKGSLL 91
Query: 202 RVLA---GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
L GR ++ LVD A Q+A GM Y+ ++ IHRDL+S+N+L+ +
Sbjct: 92 DFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGNGL------ 142
Query: 259 FKTLKITDFGLAREVY---KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELL 315
KI DFGLAR + T A W APE F+ SDVWS+G++L EL+
Sbjct: 143 --ICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELV 200
Query: 316 T-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKA 374
T G +PY +N +P P CP LM CW+ D RP+F+ +
Sbjct: 201 TKGRVPYPGMNNREVLEQVERG-YRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSF 259
Query: 375 LNN 377
L +
Sbjct: 260 LED 262
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 123/262 (46%), Gaps = 44/262 (16%)
Query: 142 EVAIKV----AHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARG 197
+VA+K+ AH + E ++ +K + L H NIV+L+G C + ++ EY
Sbjct: 78 KVAVKMLKSTAHADEKEALMSELK---IMSHLGQHENIVNLLGACTHGGPVLVITEYCCY 134
Query: 198 GPLNRVLAGRKIRPDVL-------------------VDWAIQIAEGMNYLHCQAPISLIH 238
G L L R+ RP L + ++ Q+A+GM +L A + IH
Sbjct: 135 GDLLNFL--RRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIH 189
Query: 239 RDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMAPEVIK 294
RD+ + NVLL+ KI DFGLAR++ ++ G WMAPE I
Sbjct: 190 RDVAARNVLLTNG--------HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF 241
Query: 295 TSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTL 353
+++ SDVWSYG++LWE+ + G PY I + + P+ P+ ++
Sbjct: 242 DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSI 301
Query: 354 MEACWEADSHMRPSFKTILKAL 375
M+ACW + RP+F+ I L
Sbjct: 302 MQACWALEPTHRPTFQQICSFL 323
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 113/246 (45%), Gaps = 22/246 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK P E QE +++ H +V L V + P + +V EY G L
Sbjct: 45 VAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVCEYMSKGSLLD 101
Query: 203 VLAG---RKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQF 259
L G + +R LVD A QIA GM Y+ ++ +HRDL+++N+L+ E +
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENL------- 151
Query: 260 KTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
K+ DFGLAR + + + G W APE F+ SDVWS+G++L EL T
Sbjct: 152 -VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
Query: 317 -GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
G +PY + +P P CP+ LM CW D RP+F+ + L
Sbjct: 211 KGRVPYPGM-VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 269
Query: 376 NNIVHS 381
+ S
Sbjct: 270 EDYFTS 275
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 113/246 (45%), Gaps = 22/246 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK P E QE +++ H +V L V + P + +V+EY G L
Sbjct: 45 VAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVIEYMSKGSLLD 101
Query: 203 VL---AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQF 259
L G+ +R LVD A QIA GM Y+ ++ +HRDL+++N+L+ E +
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENL------- 151
Query: 260 KTLKITDFGLAREVY---KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
K+ DFGLAR + T A W APE F+ SDVWS+G++L EL T
Sbjct: 152 -VCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
Query: 317 -GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
G +PY + +P P CP+ LM CW D RP+F+ + L
Sbjct: 211 KGRVPYPGM-VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 269
Query: 376 NNIVHS 381
+ S
Sbjct: 270 EDYFTS 275
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 109/223 (48%), Gaps = 20/223 (8%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIRPDVLVDWAI 219
E L+ H+ +V L V Q P + ++ EY G L L +G K+ + L+D A
Sbjct: 68 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 126
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
QIAEGM ++ + + IHRDL+++N+L+S+ + + KI DFGLAR + +
Sbjct: 127 QIAEGMAFIEER---NYIHRDLRAANILVSDTL--------SCKIADFGLARLIEDNEYT 175
Query: 280 SAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXX 335
+ G W APE I F+ SDVWS+G++L E++T G IPY +
Sbjct: 176 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 235
Query: 336 NKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNI 378
+ P CP+ LM CW+ RP+F + L +
Sbjct: 236 G-YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 277
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 113/246 (45%), Gaps = 22/246 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK P E QE +++ H +V L V + P + +V EY G L
Sbjct: 45 VAIKTLKPGTMSP--EAFLQEAQVMKKIRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLD 101
Query: 203 VLAG---RKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQF 259
L G + +R LVD A QIA GM Y+ ++ +HRDL+++N+L+ E +
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENL------- 151
Query: 260 KTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
K+ DFGLAR + + + G W APE F+ SDVWS+G++L EL T
Sbjct: 152 -VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
Query: 317 -GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
G +PY + +P P CP+ LM CW D RP+F+ + L
Sbjct: 211 KGRVPYPGM-VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 269
Query: 376 NNIVHS 381
+ S
Sbjct: 270 EDYFTS 275
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 113/246 (45%), Gaps = 22/246 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK P E QE +++ H +V L V + P + +V EY G L
Sbjct: 36 VAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLD 92
Query: 203 VL---AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQF 259
L G+ +R LVD A QIA GM Y+ ++ +HRDL+++N+L+ E +
Sbjct: 93 FLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENL------- 142
Query: 260 KTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
K+ DFGLAR + + + G W APE F+ SDVWS+G++L EL T
Sbjct: 143 -VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 201
Query: 317 -GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
G +PY + +P P CP+ LM CW D RP+F+ + L
Sbjct: 202 KGRVPYPGM-VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 260
Query: 376 NNIVHS 381
+ S
Sbjct: 261 EDYFTS 266
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 110/226 (48%), Gaps = 20/226 (8%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIRPDVLVDWAI 219
E L+ H+ +V L V Q P + ++ EY G L L +G K+ + L+D A
Sbjct: 53 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 111
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
QIAEGM ++ + + IHRDL+++N+L+S+ + + KI DFGLAR + +
Sbjct: 112 QIAEGMAFIEER---NYIHRDLRAANILVSDTL--------SCKIADFGLARLIEDNEYT 160
Query: 280 SAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXX 335
+ G W APE I F+ SDVWS+G++L E++T G IPY +
Sbjct: 161 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 220
Query: 336 NKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ P CP+ LM CW+ RP+F + L + +
Sbjct: 221 G-YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 265
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 113/246 (45%), Gaps = 22/246 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK P E QE +++ H +V L V + P + +V EY G L
Sbjct: 34 VAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLD 90
Query: 203 VL---AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQF 259
L G+ +R LVD A QIA GM Y+ ++ +HRDL+++N+L+ E +
Sbjct: 91 FLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENL------- 140
Query: 260 KTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
K+ DFGLAR + + + G W APE F+ SDVWS+G++L EL T
Sbjct: 141 -VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 199
Query: 317 -GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
G +PY + +P P CP+ LM CW D RP+F+ + L
Sbjct: 200 KGRVPYPGM-VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 258
Query: 376 NNIVHS 381
+ S
Sbjct: 259 EDYFTS 264
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 110/226 (48%), Gaps = 20/226 (8%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIRPDVLVDWAI 219
E L+ H+ +V L V Q P + ++ EY G L L +G K+ + L+D A
Sbjct: 64 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 122
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
QIAEGM ++ + + IHRDL+++N+L+S+ + + KI DFGLAR + +
Sbjct: 123 QIAEGMAFIEER---NYIHRDLRAANILVSDTL--------SCKIADFGLARLIEDNEYT 171
Query: 280 SAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXX 335
+ G W APE I F+ SDVWS+G++L E++T G IPY +
Sbjct: 172 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 231
Query: 336 NKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ P CP+ LM CW+ RP+F + L + +
Sbjct: 232 G-YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 276
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 110/226 (48%), Gaps = 20/226 (8%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIRPDVLVDWAI 219
E L+ H+ +V L V Q P + ++ EY G L L +G K+ + L+D A
Sbjct: 63 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 121
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
QIAEGM ++ + + IHRDL+++N+L+S+ + + KI DFGLAR + +
Sbjct: 122 QIAEGMAFIEER---NYIHRDLRAANILVSDTL--------SCKIADFGLARLIEDNEYT 170
Query: 280 SAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXX 335
+ G W APE I F+ SDVWS+G++L E++T G IPY +
Sbjct: 171 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 230
Query: 336 NKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ P CP+ LM CW+ RP+F + L + +
Sbjct: 231 G-YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 275
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 113/246 (45%), Gaps = 22/246 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK P E QE +++ H +V L V + P + +V EY G L
Sbjct: 45 VAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGCLLD 101
Query: 203 VL---AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQF 259
L G+ +R LVD A QIA GM Y+ ++ +HRDL+++N+L+ E +
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENL------- 151
Query: 260 KTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
K+ DFGLAR + + + G W APE F+ SDVWS+G++L EL T
Sbjct: 152 -VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
Query: 317 -GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
G +PY + +P P CP+ LM CW D RP+F+ + L
Sbjct: 211 KGRVPYPGM-VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 269
Query: 376 NNIVHS 381
+ S
Sbjct: 270 EDYFTS 275
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 110/226 (48%), Gaps = 20/226 (8%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIRPDVLVDWAI 219
E L+ H+ +V L V Q P + ++ EY G L L +G K+ + L+D A
Sbjct: 58 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
QIAEGM ++ + + IHRDL+++N+L+S+ + + KI DFGLAR + +
Sbjct: 117 QIAEGMAFIEER---NYIHRDLRAANILVSDTL--------SCKIADFGLARLIEDNEYT 165
Query: 280 SAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXX 335
+ G W APE I F+ SDVWS+G++L E++T G IPY +
Sbjct: 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 336 NKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ P CP+ LM CW+ RP+F + L + +
Sbjct: 226 G-YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 126/254 (49%), Gaps = 32/254 (12%)
Query: 132 KVYKGI--YEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
+VYKGI + K+ VAIK+ E+ +E+++QE +L D I G L+S KL
Sbjct: 34 EVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSYLKSTKLW 93
Query: 190 LVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLS 249
++MEY GG +L + + +I +G++YLH + IHRD+K++NVLLS
Sbjct: 94 IIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERK---IHRDIKAANVLLS 150
Query: 250 EPIENEDLQFKTLKITDFGLAREVYKT--THMSAAGTYAWMAPEVIKTSIFSKASDVWSY 307
E + +K+ DFG+A ++ T GT WMAPEVIK S + +D+WS
Sbjct: 151 EQGD--------VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSL 202
Query: 308 GVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCP--------QLFKTLMEACWE 359
G+ EL GE P ++ ++ IP P + FK +EAC
Sbjct: 203 GITAIELAKGEPPNSDLHPM---------RVLFLIPKNSPPTLEGQHSKPFKEFVEACLN 253
Query: 360 ADSHMRPSFKTILK 373
D RP+ K +LK
Sbjct: 254 KDPRFRPTAKELLK 267
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 118/262 (45%), Gaps = 33/262 (12%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGPL 200
VA+K + KQE +L H +I+ G C + L LVMEY G L
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 201 NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L I L+ +A QI EGM YLH Q IHR+L + NVLL +N+ L
Sbjct: 106 RDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRNLAARNVLL----DNDRL--- 155
Query: 261 TLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELL 315
+KI DFGLA+ V Y W APE +K F ASDVWS+GV L+ELL
Sbjct: 156 -VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
Query: 316 T-----GEIPYKSINXXXXXXXXXXN-KLT--------LPIPSTCPQLFKTLMEACWEAD 361
T P K + +LT LP P CP LM+ CWE +
Sbjct: 215 THCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETE 274
Query: 362 SHMRPSFKTILKALNNIVHSEF 383
+ RP+F+ ++ L VH ++
Sbjct: 275 ASFRPTFENLIPILKT-VHEKY 295
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 112/246 (45%), Gaps = 22/246 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK P E QE +++ H +V L V + P + +V EY G L
Sbjct: 45 VAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLD 101
Query: 203 VL---AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQF 259
L G+ +R LVD A QIA GM Y+ ++ +HRDL ++N+L+ E +
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLAAANILVGENL------- 151
Query: 260 KTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
K+ DFGLAR + + + G W APE F+ SDVWS+G++L EL T
Sbjct: 152 -VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
Query: 317 -GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
G +PY + +P P CP+ LM CW D RP+F+ + L
Sbjct: 211 KGRVPYPGM-VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 269
Query: 376 NNIVHS 381
+ S
Sbjct: 270 EDYFTS 275
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 113/246 (45%), Gaps = 22/246 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK P E QE +++ H +V L V + P + +V EY G L
Sbjct: 294 VAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLD 350
Query: 203 VL---AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQF 259
L G+ +R LVD A QIA GM Y+ ++ +HRDL+++N+L+ E +
Sbjct: 351 FLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENL------- 400
Query: 260 KTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
K+ DFGLAR + + + G W APE F+ SDVWS+G++L EL T
Sbjct: 401 -VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 459
Query: 317 -GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
G +PY + +P P CP+ LM CW + RP+F+ + L
Sbjct: 460 KGRVPYPGM-VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 518
Query: 376 NNIVHS 381
+ S
Sbjct: 519 EDYFTS 524
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 37 ALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSSI 96
ALYDY++ +LS ++G+ +++++ GD WW + G P+N+V+
Sbjct: 90 ALYDYESRTETDLSFKKGERLQIVNN---TEGD--WWLA--HSLSTGQTGYIPSNYVAPS 142
Query: 97 EDIN 100
+ I
Sbjct: 143 DSIQ 146
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 116/248 (46%), Gaps = 21/248 (8%)
Query: 136 GIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK-LCLVMEY 194
G Y +VA+K ++ + E ++ H N+V L+GV ++ L +V EY
Sbjct: 212 GDYRGNKVAVKCIK---NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268
Query: 195 ARGGPLNRVLAGRK---IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEP 251
G L L R + D L+ +++ + E M YL + +HRDL + NVL+SE
Sbjct: 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSED 325
Query: 252 IENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVL 311
K++DFGL +E +T + W APE ++ FS SDVWS+G++L
Sbjct: 326 --------NVAKVSDFGLTKEA-SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILL 376
Query: 312 WELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKT 370
WE+ + G +PY I + P CP +M+ CW D+ RP+F
Sbjct: 377 WEIYSFGRVPYPRIPLKDVVPRVEKG-YKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQ 435
Query: 371 ILKALNNI 378
+ + L +I
Sbjct: 436 LREQLEHI 443
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 109/226 (48%), Gaps = 20/226 (8%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIRPDVLVDWAI 219
E L+ H+ +V L V Q P + ++ EY G L L +G K+ + L+D A
Sbjct: 64 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 122
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
QIAEGM ++ + + IHRDL+++N+L+S+ + + KI DFGLAR +
Sbjct: 123 QIAEGMAFIEER---NYIHRDLRAANILVSDTL--------SCKIADFGLARLIEDNEXT 171
Query: 280 SAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXX 335
+ G W APE I F+ SDVWS+G++L E++T G IPY +
Sbjct: 172 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 231
Query: 336 NKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ P CP+ LM CW+ RP+F + L + +
Sbjct: 232 G-YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 276
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 113/246 (45%), Gaps = 22/246 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK P E QE +++ H +V L V + P + +V EY G L
Sbjct: 211 VAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLD 267
Query: 203 VL---AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQF 259
L G+ +R LVD A QIA GM Y+ ++ +HRDL+++N+L+ E +
Sbjct: 268 FLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENL------- 317
Query: 260 KTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
K+ DFGLAR + + + G W APE F+ SDVWS+G++L EL T
Sbjct: 318 -VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
Query: 317 -GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
G +PY + +P P CP+ LM CW + RP+F+ + L
Sbjct: 377 KGRVPYPGM-VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 435
Query: 376 NNIVHS 381
+ S
Sbjct: 436 EDYFTS 441
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 37 ALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSSI 96
ALYDY++ +LS ++G+ +++++ GD WW + G P+N+V+
Sbjct: 7 ALYDYESRTETDLSFKKGERLQIVNN---TEGD--WWLA--HSLSTGQTGYIPSNYVAPS 59
Query: 97 EDIN 100
+ I
Sbjct: 60 DSIQ 63
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 113/246 (45%), Gaps = 22/246 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK P E QE +++ H +V L V + P + +V EY G L
Sbjct: 211 VAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLD 267
Query: 203 VL---AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQF 259
L G+ +R LVD A QIA GM Y+ ++ +HRDL+++N+L+ E +
Sbjct: 268 FLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENL------- 317
Query: 260 KTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
K+ DFGLAR + + + G W APE F+ SDVWS+G++L EL T
Sbjct: 318 -VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
Query: 317 -GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
G +PY + +P P CP+ LM CW + RP+F+ + L
Sbjct: 377 KGRVPYPGM-VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 435
Query: 376 NNIVHS 381
+ S
Sbjct: 436 EDYFTS 441
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 37 ALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSSI 96
ALYDY++ +LS ++G+ +++++ GD WW + G P+N+V+
Sbjct: 7 ALYDYESRTETDLSFKKGERLQIVNN---TEGD--WWLA--HSLSTGQTGYIPSNYVAPS 59
Query: 97 EDIN 100
+ I
Sbjct: 60 DSIQ 63
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 109/226 (48%), Gaps = 20/226 (8%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIRPDVLVDWAI 219
E L+ H+ +V L V Q P + ++ EY G L L +G K+ + L+D A
Sbjct: 58 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR---EVYKT 276
QIAEGM ++ + + IHRDL+++N+L+S+ + + KI DFGLAR + T
Sbjct: 117 QIAEGMAFIEER---NYIHRDLRAANILVSDTL--------SCKIADFGLARLIEDAEXT 165
Query: 277 THMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXX 335
A W APE I F+ SDVWS+G++L E++T G IPY +
Sbjct: 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 336 NKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ P CP+ LM CW+ RP+F + L + +
Sbjct: 226 G-YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 113/235 (48%), Gaps = 23/235 (9%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIRPDVLVDWAI 219
E L+ H+ +V L V Q P + ++ EY G L L +G K+ + L+D A
Sbjct: 67 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 125
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
QIAEGM ++ + + IHRDL+++N+L+S+ + + KI DFGLAR +
Sbjct: 126 QIAEGMAFIEER---NYIHRDLRAANILVSDTL--------SCKIADFGLARLIEDNEXT 174
Query: 280 SAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXX 335
+ G W APE I F+ SDVWS+G++L E++T G IPY +
Sbjct: 175 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 234
Query: 336 NKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF---KTILKALNNIVHSEFIQTP 387
+ P CP+ LM CW+ RP+F +++L+ +F P
Sbjct: 235 G-YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQFQPQP 288
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 109/226 (48%), Gaps = 20/226 (8%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIRPDVLVDWAI 219
E L+ H+ +V L V Q P + ++ EY G L L +G K+ + L+D A
Sbjct: 66 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 124
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
QIAEGM ++ + + IHRDL+++N+L+S+ + + KI DFGLAR +
Sbjct: 125 QIAEGMAFIEER---NYIHRDLRAANILVSDTL--------SCKIADFGLARLIEDNEXT 173
Query: 280 SAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXX 335
+ G W APE I F+ SDVWS+G++L E++T G IPY +
Sbjct: 174 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 233
Query: 336 NKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ P CP+ LM CW+ RP+F + L + +
Sbjct: 234 G-YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 278
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 114/247 (46%), Gaps = 24/247 (9%)
Query: 143 VAIKVAHPNPDENIL-ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLN 201
VAIK P N+ E QE +++ H +V L V + P + +V EY G L
Sbjct: 212 VAIKTLKPG---NMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLL 267
Query: 202 RVLAG---RKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
L G + +R LVD A QIA GM Y+ ++ +HRDL+++N+L+ E +
Sbjct: 268 DFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENL------ 318
Query: 259 FKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELL 315
K+ DFGL R + + + G W APE F+ SDVWS+G++L EL
Sbjct: 319 --VCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 376
Query: 316 T-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKA 374
T G +PY + +P P CP+ LM CW D RP+F+ +
Sbjct: 377 TKGRVPYPGM-VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAF 435
Query: 375 LNNIVHS 381
L + S
Sbjct: 436 LEDYFTS 442
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 37 ALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSSI 96
ALYDY++ +LS ++G+ +++++ GD WW + G P+N+V+
Sbjct: 8 ALYDYESRTETDLSFKKGERLQIVNN---TEGD--WWLA--HSLTTGQTGYIPSNYVAPS 60
Query: 97 EDIN 100
+ I
Sbjct: 61 DSIQ 64
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 118/262 (45%), Gaps = 33/262 (12%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGPL 200
VA+K + KQE +L H +I+ G C + L LVMEY G L
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 201 NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L I L+ +A QI EGM YLH Q IHR+L + NVLL +N+ L
Sbjct: 106 RDYLPRHSIGLAQLLLFAQQICEGMAYLHSQ---HYIHRNLAARNVLL----DNDRL--- 155
Query: 261 TLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELL 315
+KI DFGLA+ V Y W APE +K F ASDVWS+GV L+ELL
Sbjct: 156 -VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
Query: 316 T-----GEIPYKSINXXXXXXXXXXN-KLT--------LPIPSTCPQLFKTLMEACWEAD 361
T P K + +LT LP P CP LM+ CWE +
Sbjct: 215 THCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETE 274
Query: 362 SHMRPSFKTILKALNNIVHSEF 383
+ RP+F+ ++ L VH ++
Sbjct: 275 ASFRPTFENLIPILKT-VHEKY 295
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 124/255 (48%), Gaps = 23/255 (9%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVME 193
++G Y+ IK + DE I +E K++ H +V L GVC + + ++ E
Sbjct: 25 WRGQYDVAIKMIKEGSMSEDEFI-----EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 79
Query: 194 Y-ARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEP 251
Y A G LN + R + + L++ + E M YL + +HRDL + N L+++
Sbjct: 80 YMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQ 136
Query: 252 IENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYG 308
+K++DFGL+R V + S+ G+ W PEV+ S FS SD+W++G
Sbjct: 137 --------GVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 188
Query: 309 VVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPS 367
V++WE+ + G++PY+ L L P + T+M +CW + RP+
Sbjct: 189 VLMWEIYSLGKMPYERFTNSETAEHIAQG-LRLYRPHLASEKVYTIMYSCWHEKADERPT 247
Query: 368 FKTILKALNNIVHSE 382
FK +L + +++ E
Sbjct: 248 FKILLSNILDVMDEE 262
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 124/255 (48%), Gaps = 23/255 (9%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVME 193
++G Y+ IK + DE I +E K++ H +V L GVC + + ++ E
Sbjct: 29 WRGQYDVAIKMIKEGSMSEDEFI-----EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 83
Query: 194 Y-ARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEP 251
Y A G LN + R + + L++ + E M YL + +HRDL + N L+++
Sbjct: 84 YMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQ 140
Query: 252 IENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYG 308
+K++DFGL+R V + S+ G+ W PEV+ S FS SD+W++G
Sbjct: 141 --------GVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 192
Query: 309 VVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPS 367
V++WE+ + G++PY+ L L P + T+M +CW + RP+
Sbjct: 193 VLMWEIYSLGKMPYERFTNSETAEHIAQG-LRLYRPHLASEKVYTIMYSCWHEKADERPT 251
Query: 368 FKTILKALNNIVHSE 382
FK +L + +++ E
Sbjct: 252 FKILLSNILDVMDEE 266
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 113/246 (45%), Gaps = 22/246 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK P E QE +++ H +V L V + P + +V EY G L
Sbjct: 38 VAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLD 94
Query: 203 VL---AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQF 259
L G+ +R LVD A QIA GM Y+ ++ +HRDL+++N+L+ E +
Sbjct: 95 FLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENL------- 144
Query: 260 KTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
K+ DFGLAR + + + G W APE F+ SDVWS+G++L EL T
Sbjct: 145 -VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 203
Query: 317 -GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
G +PY + +P P CP+ LM CW + RP+F+ + L
Sbjct: 204 KGRVPYPGM-VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 262
Query: 376 NNIVHS 381
+ S
Sbjct: 263 EDYFTS 268
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 109/226 (48%), Gaps = 20/226 (8%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIRPDVLVDWAI 219
E L+ H+ +V L V Q P + ++ EY G L L +G K+ + L+D A
Sbjct: 58 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
QIAEGM ++ + + IHRDL+++N+L+S+ + + KI DFGLAR +
Sbjct: 117 QIAEGMAFIEER---NYIHRDLRAANILVSDTL--------SCKIADFGLARLIEDNEXT 165
Query: 280 SAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXX 335
+ G W APE I F+ SDVWS+G++L E++T G IPY +
Sbjct: 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 336 NKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ P CP+ LM CW+ RP+F + L + +
Sbjct: 226 G-YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 109/226 (48%), Gaps = 20/226 (8%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIRPDVLVDWAI 219
E L+ H+ +V L V Q P + ++ EY G L L +G K+ + L+D A
Sbjct: 59 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 117
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
QIAEGM ++ + + IHRDL+++N+L+S+ + + KI DFGLAR +
Sbjct: 118 QIAEGMAFIEER---NYIHRDLRAANILVSDTL--------SCKIADFGLARLIEDNEXT 166
Query: 280 SAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXX 335
+ G W APE I F+ SDVWS+G++L E++T G IPY +
Sbjct: 167 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 226
Query: 336 NKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ P CP+ LM CW+ RP+F + L + +
Sbjct: 227 G-YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 271
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 113/246 (45%), Gaps = 22/246 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK P E QE +++ H +V L V + P + +V EY G L
Sbjct: 211 VAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVGEYMSKGSLLD 267
Query: 203 VL---AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQF 259
L G+ +R LVD A QIA GM Y+ ++ +HRDL+++N+L+ E +
Sbjct: 268 FLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENL------- 317
Query: 260 KTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
K+ DFGLAR + + + G W APE F+ SDVWS+G++L EL T
Sbjct: 318 -VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
Query: 317 -GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
G +PY + +P P CP+ LM CW + RP+F+ + L
Sbjct: 377 KGRVPYPGM-VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 435
Query: 376 NNIVHS 381
+ S
Sbjct: 436 EDYFTS 441
Score = 28.9 bits (63), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 37 ALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSSI 96
ALYDY++ +LS ++G+ +++++ GD WW + G P+N+V+
Sbjct: 7 ALYDYESRTETDLSFKKGERLQIVNN---TEGD--WWLA--HSLSTGQTGYIPSNYVAPS 59
Query: 97 EDIN 100
+ I
Sbjct: 60 DSIQ 63
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 121/254 (47%), Gaps = 21/254 (8%)
Query: 132 KVYKGIYEKQ-EVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCL 190
+V+ Y K +VA+K P +E E ++ H +V L V + P +
Sbjct: 203 EVWMATYNKHTKVAVKTMKPGSMS--VEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYII 260
Query: 191 VMEYARGGPLNRVLA--GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
A+G L+ + + G K L+D++ QIAEGM ++ + + IHRDL+++N+L+
Sbjct: 261 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILV 317
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVW 305
S + KI DFGLAR + + + G W APE I F+ SDVW
Sbjct: 318 SASL--------VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 369
Query: 306 SYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHM 364
S+G++L E++T G IPY ++ +P P CP+ +M CW+
Sbjct: 370 SFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMPRPENCPEELYNIMMRCWKNRPEE 428
Query: 365 RPSFKTILKALNNI 378
RP+F+ I L++
Sbjct: 429 RPTFEYIQSVLDDF 442
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 8/63 (12%)
Query: 37 ALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSSI 96
ALYDY+AI ++LS ++GD + VL + SG+ WW K K G P+N+V+ +
Sbjct: 13 ALYDYEAIHHEDLSFQKGDQMVVLEE----SGE--WW--KARSLATRKEGYIPSNYVARV 64
Query: 97 EDI 99
+ +
Sbjct: 65 DSL 67
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 122/267 (45%), Gaps = 47/267 (17%)
Query: 142 EVAIKV----AHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARG 197
+VA+K+ AH + E ++ +K + L H NIV+L+G C + ++ EY
Sbjct: 63 KVAVKMLKSTAHADEKEALMSELK---IMSHLGQHENIVNLLGACTHGGPVLVITEYCCY 119
Query: 198 GPLNRVLA------------------------GRKIRPDVLVDWAIQIAEGMNYLHCQAP 233
G L L GR + L+ ++ Q+A+GM +L A
Sbjct: 120 GDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---AS 176
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT----YAWMA 289
+ IHRD+ + NVLL+ KI DFGLAR++ ++ G WMA
Sbjct: 177 KNCIHRDVAARNVLLTNG--------HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 228
Query: 290 PEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQ 348
PE I +++ SDVWSYG++LWE+ + G PY I + + P+ P+
Sbjct: 229 PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPK 288
Query: 349 LFKTLMEACWEADSHMRPSFKTILKAL 375
++M+ACW + RP+F+ I L
Sbjct: 289 NIYSIMQACWALEPTHRPTFQQICSFL 315
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 109/226 (48%), Gaps = 20/226 (8%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIRPDVLVDWAI 219
E L+ H+ +V L V Q P + ++ EY G L L +G K+ + L+D A
Sbjct: 60 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 118
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
QIAEGM ++ + + IHRDL+++N+L+S+ + + KI DFGLAR +
Sbjct: 119 QIAEGMAFIEER---NYIHRDLRAANILVSDTL--------SCKIADFGLARLIEDNEXT 167
Query: 280 SAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXX 335
+ G W APE I F+ SDVWS+G++L E++T G IPY +
Sbjct: 168 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 227
Query: 336 NKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ P CP+ LM CW+ RP+F + L + +
Sbjct: 228 G-YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 272
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 112/246 (45%), Gaps = 22/246 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK P E QE +++ H +V L V + P + +V EY G L
Sbjct: 35 VAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IXIVTEYMSKGSLLD 91
Query: 203 VL---AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQF 259
L G+ +R LVD A QIA GM Y+ ++ +HRDL+++N+L+ E +
Sbjct: 92 FLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENL------- 141
Query: 260 KTLKITDFGLAREVY---KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
K+ DFGLAR + T A W APE F+ SDVWS+G++L EL T
Sbjct: 142 -VCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 200
Query: 317 -GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
G +PY + +P P CP+ LM CW + RP+F+ + L
Sbjct: 201 KGRVPYPGM-VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 259
Query: 376 NNIVHS 381
+ S
Sbjct: 260 EDYFTS 265
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 124/255 (48%), Gaps = 23/255 (9%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVME 193
++G Y+ IK + DE I +E K++ H +V L GVC + + ++ E
Sbjct: 36 WRGQYDVAIKMIKEGSMSEDEFI-----EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 90
Query: 194 Y-ARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEP 251
Y A G LN + R + + L++ + E M YL + +HRDL + N L+++
Sbjct: 91 YMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQ 147
Query: 252 IENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYG 308
+K++DFGL+R V + S+ G+ W PEV+ S FS SD+W++G
Sbjct: 148 --------GVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 199
Query: 309 VVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPS 367
V++WE+ + G++PY+ L L P + T+M +CW + RP+
Sbjct: 200 VLMWEIYSLGKMPYERFTNSETAEHIAQG-LRLYRPHLASEKVYTIMYSCWHEKADERPT 258
Query: 368 FKTILKALNNIVHSE 382
FK +L + +++ E
Sbjct: 259 FKILLSNILDVMDEE 273
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 109/226 (48%), Gaps = 20/226 (8%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIRPDVLVDWAI 219
E L+ H+ +V L V Q P + ++ EY G L L +G K+ + L+D A
Sbjct: 58 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
QIAEGM ++ + + IHRDL+++N+L+S+ + + KI DFGLAR +
Sbjct: 117 QIAEGMAFIEER---NYIHRDLRAANILVSDTL--------SCKIADFGLARLIEDNEXT 165
Query: 280 SAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXX 335
+ G W APE I F+ SDVWS+G++L E++T G IPY +
Sbjct: 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 336 NKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ P CP+ LM CW+ RP+F + L + +
Sbjct: 226 G-YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 121/261 (46%), Gaps = 38/261 (14%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGPL 200
VA+K + +E+ L + ++E ++L H NIV GVC + + L L+MEY G L
Sbjct: 42 VAVKKLQHSTEEH-LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 201 NRVLAGRKIRPD--VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
L K R D L+ + QI +GM YL + IHRDL + N+L +ENE+
Sbjct: 101 RDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL----VENEN-- 151
Query: 259 FKTLKITDFGLAR------EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLW 312
+KI DFGL + E +K + + W APE + S FS ASDVWS+GVVL+
Sbjct: 152 --RVKIGDFGLTKVLPQDKEFFKVKEPGESPIF-WYAPESLTESKFSVASDVWSFGVVLY 208
Query: 313 ELLTGEIPYKSINXXXXXX---------------XXXXNKLTLPIPSTCPQLFKTLMEAC 357
EL T KS N LP P CP +M C
Sbjct: 209 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 268
Query: 358 WEADSHMRPSFKTILKALNNI 378
W + + RPSF+ + ++ I
Sbjct: 269 WNNNVNQRPSFRDLALRVDQI 289
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 110/226 (48%), Gaps = 20/226 (8%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIRPDVLVDWAI 219
E L+ H+ +V L V Q P + ++ EY G L L +G K+ + L+D A
Sbjct: 54 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 112
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
QIAEGM ++ + + IHR+L+++N+L+S+ + + KI DFGLAR + +
Sbjct: 113 QIAEGMAFIEER---NYIHRNLRAANILVSDTL--------SCKIADFGLARLIEDNEYT 161
Query: 280 SAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXX 335
+ G W APE I F+ SDVWS+G++L E++T G IPY +
Sbjct: 162 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 221
Query: 336 NKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ P CP+ LM CW+ RP+F + L + +
Sbjct: 222 G-YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 266
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 124/255 (48%), Gaps = 23/255 (9%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVME 193
++G Y+ IK + DE I +E K++ H +V L GVC + + ++ E
Sbjct: 45 WRGQYDVAIKMIKEGSMSEDEFI-----EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99
Query: 194 Y-ARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEP 251
Y A G LN + R + + L++ + E M YL + +HRDL + N L+++
Sbjct: 100 YMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQ 156
Query: 252 IENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYG 308
+K++DFGL+R V + S+ G+ W PEV+ S FS SD+W++G
Sbjct: 157 --------GVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 208
Query: 309 VVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPS 367
V++WE+ + G++PY+ L L P + T+M +CW + RP+
Sbjct: 209 VLMWEIYSLGKMPYERFTNSETAEHIAQG-LRLYRPHLASEKVYTIMYSCWHEKADERPT 267
Query: 368 FKTILKALNNIVHSE 382
FK +L + +++ E
Sbjct: 268 FKILLSNILDVMDEE 282
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 121/254 (47%), Gaps = 21/254 (8%)
Query: 132 KVYKGIYEKQ-EVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCL 190
+V+ Y K +VA+K P +E E ++ H +V L V + P +
Sbjct: 30 EVWMATYNKHTKVAVKTMKPGSMS--VEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYII 87
Query: 191 VMEYARGGPLNRVLA--GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
A+G L+ + + G K L+D++ QIAEGM ++ + + IHRDL+++N+L+
Sbjct: 88 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILV 144
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVW 305
S + KI DFGLAR + + + G W APE I F+ SDVW
Sbjct: 145 SASL--------VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 196
Query: 306 SYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHM 364
S+G++L E++T G IPY ++ +P P CP+ +M CW+
Sbjct: 197 SFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMPRPENCPEELYNIMMRCWKNRPEE 255
Query: 365 RPSFKTILKALNNI 378
RP+F+ I L++
Sbjct: 256 RPTFEYIQSVLDDF 269
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 121/261 (46%), Gaps = 38/261 (14%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGPL 200
VA+K + +E+ L + ++E ++L H NIV GVC + + L L+MEY G L
Sbjct: 43 VAVKKLQHSTEEH-LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 101
Query: 201 NRVLAGRKIRPD--VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
L K R D L+ + QI +GM YL + IHR+L + N+L +ENE+
Sbjct: 102 RDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRNLATRNIL----VENEN-- 152
Query: 259 FKTLKITDFGLAR------EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLW 312
+KI DFGL + E YK + + W APE + S FS ASDVWS+GVVL+
Sbjct: 153 --RVKIGDFGLTKVLPQDKEYYKVKEPGESPIF-WYAPESLTESKFSVASDVWSFGVVLY 209
Query: 313 ELLTGEIPYKSINXXXXXX---------------XXXXNKLTLPIPSTCPQLFKTLMEAC 357
EL T KS N LP P CP +M C
Sbjct: 210 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 269
Query: 358 WEADSHMRPSFKTILKALNNI 378
W + + RPSF+ + ++ I
Sbjct: 270 WNNNVNQRPSFRDLALRVDQI 290
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 113/246 (45%), Gaps = 22/246 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK P E QE +++ H +V L V + P + +V EY G L
Sbjct: 42 VAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMNKGSLLD 98
Query: 203 VL---AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQF 259
L G+ +R LVD + QIA GM Y+ ++ +HRDL+++N+L+ E +
Sbjct: 99 FLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENL------- 148
Query: 260 KTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
K+ DFGLAR + + + G W APE F+ SDVWS+G++L EL T
Sbjct: 149 -VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 207
Query: 317 -GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
G +PY + +P P CP+ LM CW + RP+F+ + L
Sbjct: 208 KGRVPYPGM-VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 266
Query: 376 NNIVHS 381
+ S
Sbjct: 267 EDYFTS 272
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 123/255 (48%), Gaps = 23/255 (9%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVME 193
++G Y+ IK + DE I +E K++ H +V L GVC + + ++ E
Sbjct: 45 WRGQYDVAIKMIKEGSMSEDEFI-----EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99
Query: 194 Y-ARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEP 251
Y A G LN + R + + L++ + E M YL + +HRDL + N L+++
Sbjct: 100 YMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQ 156
Query: 252 IENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYG 308
+K++DFGL+R V S+ G+ W PEV+ S FS SD+W++G
Sbjct: 157 --------GVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 208
Query: 309 VVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPS 367
V++WE+ + G++PY+ L L P + T+M +CW + RP+
Sbjct: 209 VLMWEIYSLGKMPYERFTNSETAEHIAQG-LRLYRPHLASEKVYTIMYSCWHEKADERPT 267
Query: 368 FKTILKALNNIVHSE 382
FK +L + +++ E
Sbjct: 268 FKILLSNILDVMDEE 282
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 123/252 (48%), Gaps = 23/252 (9%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVME 193
++G Y+ IK + DE I +E K++ H +V L GVC + + ++ E
Sbjct: 30 WRGQYDVAIKMIKEGSMSEDEFI-----EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 84
Query: 194 Y-ARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEP 251
Y A G LN + R + + L++ + E M YL + +HRDL + N L+++
Sbjct: 85 YMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQ 141
Query: 252 IENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYG 308
+K++DFGL+R V + S+ G+ W PEV+ S FS SD+W++G
Sbjct: 142 --------GVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 193
Query: 309 VVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPS 367
V++WE+ + G++PY+ L L P + T+M +CW + RP+
Sbjct: 194 VLMWEIYSLGKMPYERFTNSETAEHIAQG-LRLYRPHLASEKVYTIMYSCWHEKADERPT 252
Query: 368 FKTILKALNNIV 379
FK +L + +++
Sbjct: 253 FKILLSNILDVM 264
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 93/174 (53%), Gaps = 18/174 (10%)
Query: 214 LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV 273
L+ ++ Q+A+GM +L A IHRDL + N+LLSE +KI DFGLAR++
Sbjct: 202 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEK--------NVVKICDFGLARDI 250
Query: 274 YKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXX 328
YK G WMAPE I +++ SDVWS+GV+LWE+ + G PY +
Sbjct: 251 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 310
Query: 329 XXXXXXXNKLTLPIPS-TCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ P T P++++T+++ CW + RP+F +++ L N++ +
Sbjct: 311 EFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLLQA 363
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 112/256 (43%), Gaps = 32/256 (12%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGPL 200
VA+K + ++E ++L H +IV G C + + LVMEY G L
Sbjct: 41 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 100
Query: 201 NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L + L+ +A QI EGM YLH Q IHR L + NVLL +N+ L
Sbjct: 101 RDYLPRHCVGLAQLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLL----DNDRL--- 150
Query: 261 TLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELL 315
+KI DFGLA+ V Y W APE +K F ASDVWS+GV L+ELL
Sbjct: 151 -VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 209
Query: 316 T----GEIPYKSINXXXXXXXXXXNKL----------TLPIPSTCPQLFKTLMEACWEAD 361
T + P+ L LP P CP LM+ CWE +
Sbjct: 210 TYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETE 269
Query: 362 SHMRPSFKTILKALNN 377
+ RP+F+ ++ L
Sbjct: 270 ASFRPTFQNLVPILQT 285
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 93/174 (53%), Gaps = 18/174 (10%)
Query: 214 LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV 273
L+ ++ Q+A+GM +L A IHRDL + N+LLSE +KI DFGLAR++
Sbjct: 200 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEK--------NVVKICDFGLARDI 248
Query: 274 YKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXX 328
YK G WMAPE I +++ SDVWS+GV+LWE+ + G PY +
Sbjct: 249 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 308
Query: 329 XXXXXXXNKLTLPIPS-TCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ P T P++++T+++ CW + RP+F +++ L N++ +
Sbjct: 309 EFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLLQA 361
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 112/246 (45%), Gaps = 22/246 (8%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
VAIK P E QE +++ H +V L V + P + +V EY G L
Sbjct: 42 VAIKTLKPGTMSP--EAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMNKGSLLD 98
Query: 203 VL---AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQF 259
L G+ +R LVD + QIA GM Y+ ++ +HRDL+++N+L+ E +
Sbjct: 99 FLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENL------- 148
Query: 260 KTLKITDFGLAREVYK---TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
K+ DFGLAR + T A W APE F+ SDVWS+G++L EL T
Sbjct: 149 -VCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 207
Query: 317 -GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
G +PY + +P P CP+ LM CW + RP+F+ + L
Sbjct: 208 KGRVPYPGM-VNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 266
Query: 376 NNIVHS 381
+ S
Sbjct: 267 EDYFTS 272
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 93/174 (53%), Gaps = 18/174 (10%)
Query: 214 LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV 273
L+ ++ Q+A+GM +L A IHRDL + N+LLSE +KI DFGLAR++
Sbjct: 195 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEK--------NVVKICDFGLARDI 243
Query: 274 YKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXX 328
YK G WMAPE I +++ SDVWS+GV+LWE+ + G PY +
Sbjct: 244 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 303
Query: 329 XXXXXXXNKLTLPIPS-TCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ P T P++++T+++ CW + RP+F +++ L N++ +
Sbjct: 304 EFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLLQA 356
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 93/174 (53%), Gaps = 18/174 (10%)
Query: 214 LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV 273
L+ ++ Q+A+GM +L A IHRDL + N+LLSE +KI DFGLAR++
Sbjct: 193 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEK--------NVVKICDFGLARDI 241
Query: 274 YKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXX 328
YK G WMAPE I +++ SDVWS+GV+LWE+ + G PY +
Sbjct: 242 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 301
Query: 329 XXXXXXXNKLTLPIPS-TCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ P T P++++T+++ CW + RP+F +++ L N++ +
Sbjct: 302 EFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLLQA 354
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 123/252 (48%), Gaps = 23/252 (9%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVME 193
++G Y+ IK + DE I +E K++ H +V L GVC + + ++ E
Sbjct: 30 WRGQYDVAIKMIKEGSMSEDEFI-----EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 84
Query: 194 Y-ARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEP 251
Y A G LN + R + + L++ + E M YL + +HRDL + N L+++
Sbjct: 85 YMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQ 141
Query: 252 IENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYG 308
+K++DFGL+R V + S+ G+ W PEV+ S FS SD+W++G
Sbjct: 142 --------GVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 193
Query: 309 VVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPS 367
V++WE+ + G++PY+ L L P + T+M +CW + RP+
Sbjct: 194 VLMWEIYSLGKMPYERFTNSETAEHIAQG-LRLYRPHLASEKVYTIMYSCWHEKADERPT 252
Query: 368 FKTILKALNNIV 379
FK +L + +++
Sbjct: 253 FKILLSNILDVM 264
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 112/256 (43%), Gaps = 32/256 (12%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGPL 200
VA+K + ++E ++L H +IV G C + + LVMEY G L
Sbjct: 40 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 99
Query: 201 NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
L + L+ +A QI EGM YLH Q IHR L + NVLL +N+ L
Sbjct: 100 RDYLPRHCVGLAQLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLL----DNDRL--- 149
Query: 261 TLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELL 315
+KI DFGLA+ V Y W APE +K F ASDVWS+GV L+ELL
Sbjct: 150 -VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 208
Query: 316 T----GEIPYKSINXXXXXXXXXXNKL----------TLPIPSTCPQLFKTLMEACWEAD 361
T + P+ L LP P CP LM+ CWE +
Sbjct: 209 TYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETE 268
Query: 362 SHMRPSFKTILKALNN 377
+ RP+F+ ++ L
Sbjct: 269 ASFRPTFQNLVPILQT 284
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 120/261 (45%), Gaps = 38/261 (14%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGPL 200
VA+K + +E+ L + ++E ++L H NIV GVC + + L L+MEY G L
Sbjct: 46 VAVKKLQHSTEEH-LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 104
Query: 201 NRVLAGRKIRPD--VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
L K R D L+ + QI +GM YL + IHRDL + N+L +ENE+
Sbjct: 105 RDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL----VENEN-- 155
Query: 259 FKTLKITDFGLAR------EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLW 312
+KI DFGL + E K + + W APE + S FS ASDVWS+GVVL+
Sbjct: 156 --RVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WYAPESLTESKFSVASDVWSFGVVLY 212
Query: 313 ELLTGEIPYKSINXXXXXX---------------XXXXNKLTLPIPSTCPQLFKTLMEAC 357
EL T KS N LP P CP +M C
Sbjct: 213 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 272
Query: 358 WEADSHMRPSFKTILKALNNI 378
W + + RPSF+ + ++ I
Sbjct: 273 WNNNVNQRPSFRDLALRVDQI 293
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 120/261 (45%), Gaps = 38/261 (14%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGPL 200
VA+K + +E+ L + ++E ++L H NIV GVC + + L L+MEY G L
Sbjct: 73 VAVKKLQHSTEEH-LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 131
Query: 201 NRVLAGRKIRPD--VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
L K R D L+ + QI +GM YL + IHRDL + N+L +ENE+
Sbjct: 132 RDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL----VENEN-- 182
Query: 259 FKTLKITDFGLAR------EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLW 312
+KI DFGL + E K + + W APE + S FS ASDVWS+GVVL+
Sbjct: 183 --RVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WYAPESLTESKFSVASDVWSFGVVLY 239
Query: 313 ELLTGEIPYKSINXXXXXX---------------XXXXNKLTLPIPSTCPQLFKTLMEAC 357
EL T KS N LP P CP +M C
Sbjct: 240 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 299
Query: 358 WEADSHMRPSFKTILKALNNI 378
W + + RPSF+ + ++ I
Sbjct: 300 WNNNVNQRPSFRDLALRVDQI 320
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 120/261 (45%), Gaps = 38/261 (14%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGPL 200
VA+K + +E+ L + ++E ++L H NIV GVC + + L L+MEY G L
Sbjct: 40 VAVKKLQHSTEEH-LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 98
Query: 201 NRVLAGRKIRPD--VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
L K R D L+ + QI +GM YL + IHRDL + N+L +ENE+
Sbjct: 99 RDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL----VENEN-- 149
Query: 259 FKTLKITDFGLAR------EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLW 312
+KI DFGL + E K + + W APE + S FS ASDVWS+GVVL+
Sbjct: 150 --RVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WYAPESLTESKFSVASDVWSFGVVLY 206
Query: 313 ELLTGEIPYKSINXXXXXX---------------XXXXNKLTLPIPSTCPQLFKTLMEAC 357
EL T KS N LP P CP +M C
Sbjct: 207 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 266
Query: 358 WEADSHMRPSFKTILKALNNI 378
W + + RPSF+ + ++ I
Sbjct: 267 WNNNVNQRPSFRDLALRVDQI 287
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 120/261 (45%), Gaps = 38/261 (14%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGPL 200
VA+K + +E+ L + ++E ++L H NIV GVC + + L L+MEY G L
Sbjct: 45 VAVKKLQHSTEEH-LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 103
Query: 201 NRVLAGRKIRPD--VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
L K R D L+ + QI +GM YL + IHRDL + N+L +ENE+
Sbjct: 104 RDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL----VENEN-- 154
Query: 259 FKTLKITDFGLAR------EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLW 312
+KI DFGL + E K + + W APE + S FS ASDVWS+GVVL+
Sbjct: 155 --RVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WYAPESLTESKFSVASDVWSFGVVLY 211
Query: 313 ELLTGEIPYKSINXXXXXX---------------XXXXNKLTLPIPSTCPQLFKTLMEAC 357
EL T KS N LP P CP +M C
Sbjct: 212 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 271
Query: 358 WEADSHMRPSFKTILKALNNI 378
W + + RPSF+ + ++ I
Sbjct: 272 WNNNVNQRPSFRDLALRVDQI 292
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 120/261 (45%), Gaps = 38/261 (14%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGPL 200
VA+K + +E+ L + ++E ++L H NIV GVC + + L L+MEY G L
Sbjct: 41 VAVKKLQHSTEEH-LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 99
Query: 201 NRVLAGRKIRPD--VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
L K R D L+ + QI +GM YL + IHRDL + N+L +ENE+
Sbjct: 100 RDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL----VENEN-- 150
Query: 259 FKTLKITDFGLAR------EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLW 312
+KI DFGL + E K + + W APE + S FS ASDVWS+GVVL+
Sbjct: 151 --RVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WYAPESLTESKFSVASDVWSFGVVLY 207
Query: 313 ELLTGEIPYKSINXXXXXX---------------XXXXNKLTLPIPSTCPQLFKTLMEAC 357
EL T KS N LP P CP +M C
Sbjct: 208 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 267
Query: 358 WEADSHMRPSFKTILKALNNI 378
W + + RPSF+ + ++ I
Sbjct: 268 WNNNVNQRPSFRDLALRVDQI 288
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 120/261 (45%), Gaps = 38/261 (14%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGPL 200
VA+K + +E+ L + ++E ++L H NIV GVC + + L L+MEY G L
Sbjct: 47 VAVKKLQHSTEEH-LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 105
Query: 201 NRVLAGRKIRPD--VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
L K R D L+ + QI +GM YL + IHRDL + N+L +ENE+
Sbjct: 106 RDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL----VENEN-- 156
Query: 259 FKTLKITDFGLAR------EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLW 312
+KI DFGL + E K + + W APE + S FS ASDVWS+GVVL+
Sbjct: 157 --RVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WYAPESLTESKFSVASDVWSFGVVLY 213
Query: 313 ELLTGEIPYKSINXXXXXX---------------XXXXNKLTLPIPSTCPQLFKTLMEAC 357
EL T KS N LP P CP +M C
Sbjct: 214 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 273
Query: 358 WEADSHMRPSFKTILKALNNI 378
W + + RPSF+ + ++ I
Sbjct: 274 WNNNVNQRPSFRDLALRVDQI 294
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 120/261 (45%), Gaps = 38/261 (14%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGPL 200
VA+K + +E+ L + ++E ++L H NIV GVC + + L L+MEY G L
Sbjct: 49 VAVKKLQHSTEEH-LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 107
Query: 201 NRVLAGRKIRPD--VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
L K R D L+ + QI +GM YL + IHRDL + N+L +ENE+
Sbjct: 108 RDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL----VENEN-- 158
Query: 259 FKTLKITDFGLAR------EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLW 312
+KI DFGL + E K + + W APE + S FS ASDVWS+GVVL+
Sbjct: 159 --RVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WYAPESLTESKFSVASDVWSFGVVLY 215
Query: 313 ELLTGEIPYKSINXXXXXX---------------XXXXNKLTLPIPSTCPQLFKTLMEAC 357
EL T KS N LP P CP +M C
Sbjct: 216 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 275
Query: 358 WEADSHMRPSFKTILKALNNI 378
W + + RPSF+ + ++ I
Sbjct: 276 WNNNVNQRPSFRDLALRVDQI 296
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 120/261 (45%), Gaps = 38/261 (14%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGPL 200
VA+K + +E+ L + ++E ++L H NIV GVC + + L L+MEY G L
Sbjct: 48 VAVKKLQHSTEEH-LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 106
Query: 201 NRVLAGRKIRPD--VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
L K R D L+ + QI +GM YL + IHRDL + N+L +ENE+
Sbjct: 107 RDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL----VENEN-- 157
Query: 259 FKTLKITDFGLAR------EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLW 312
+KI DFGL + E K + + W APE + S FS ASDVWS+GVVL+
Sbjct: 158 --RVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WYAPESLTESKFSVASDVWSFGVVLY 214
Query: 313 ELLTGEIPYKSINXXXXXX---------------XXXXNKLTLPIPSTCPQLFKTLMEAC 357
EL T KS N LP P CP +M C
Sbjct: 215 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 274
Query: 358 WEADSHMRPSFKTILKALNNI 378
W + + RPSF+ + ++ I
Sbjct: 275 WNNNVNQRPSFRDLALRVDQI 295
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 120/261 (45%), Gaps = 38/261 (14%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGPL 200
VA+K + +E+ L + ++E ++L H NIV GVC + + L L+MEY G L
Sbjct: 42 VAVKKLQHSTEEH-LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 201 NRVLAGRKIRPD--VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
L K R D L+ + QI +GM YL + IHRDL + N+L +ENE+
Sbjct: 101 RDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL----VENEN-- 151
Query: 259 FKTLKITDFGLAR------EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLW 312
+KI DFGL + E K + + W APE + S FS ASDVWS+GVVL+
Sbjct: 152 --RVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WYAPESLTESKFSVASDVWSFGVVLY 208
Query: 313 ELLTGEIPYKSINXXXXXX---------------XXXXNKLTLPIPSTCPQLFKTLMEAC 357
EL T KS N LP P CP +M C
Sbjct: 209 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 268
Query: 358 WEADSHMRPSFKTILKALNNI 378
W + + RPSF+ + ++ I
Sbjct: 269 WNNNVNQRPSFRDLALRVDQI 289
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 120/261 (45%), Gaps = 38/261 (14%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGPL 200
VA+K + +E+ L + ++E ++L H NIV GVC + + L L+MEY G L
Sbjct: 42 VAVKKLQHSTEEH-LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 201 NRVLAGRKIRPD--VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
L K R D L+ + QI +GM YL + IHRDL + N+L +ENE+
Sbjct: 101 RDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL----VENEN-- 151
Query: 259 FKTLKITDFGLAR------EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLW 312
+KI DFGL + E K + + W APE + S FS ASDVWS+GVVL+
Sbjct: 152 --RVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WYAPESLTESKFSVASDVWSFGVVLY 208
Query: 313 ELLTGEIPYKSINXXXXXX---------------XXXXNKLTLPIPSTCPQLFKTLMEAC 357
EL T KS N LP P CP +M C
Sbjct: 209 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 268
Query: 358 WEADSHMRPSFKTILKALNNI 378
W + + RPSF+ + ++ I
Sbjct: 269 WNNNVNQRPSFRDLALRVDQI 289
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 120/261 (45%), Gaps = 38/261 (14%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGPL 200
VA+K + +E+ L + ++E ++L H NIV GVC + + L L+MEY G L
Sbjct: 60 VAVKKLQHSTEEH-LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 118
Query: 201 NRVLAGRKIRPD--VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
L K R D L+ + QI +GM YL + IHRDL + N+L +ENE+
Sbjct: 119 RDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL----VENEN-- 169
Query: 259 FKTLKITDFGLAR------EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLW 312
+KI DFGL + E K + + W APE + S FS ASDVWS+GVVL+
Sbjct: 170 --RVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WYAPESLTESKFSVASDVWSFGVVLY 226
Query: 313 ELLTGEIPYKSINXXXXXX---------------XXXXNKLTLPIPSTCPQLFKTLMEAC 357
EL T KS N LP P CP +M C
Sbjct: 227 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 286
Query: 358 WEADSHMRPSFKTILKALNNI 378
W + + RPSF+ + ++ I
Sbjct: 287 WNNNVNQRPSFRDLALRVDQI 307
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 119/251 (47%), Gaps = 25/251 (9%)
Query: 132 KVYKGIYEKQ-EVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCL 190
+V+ Y K +VA+K P +E E ++ H +V L V + P +
Sbjct: 197 EVWMATYNKHTKVAVKTMKPG--SMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYII 254
Query: 191 VMEYARGGPLNRVLA--GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
A+G L+ + + G K L+D++ QIAEGM ++ + + IHRDL+++N+L+
Sbjct: 255 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILV 311
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYG 308
S + KI DFGLAR + A W APE I F+ SDVWS+G
Sbjct: 312 SASL--------VCKIADFGLAR-------VGAKFPIKWTAPEAINFGSFTIKSDVWSFG 356
Query: 309 VVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPS 367
++L E++T G IPY ++ +P P CP+ +M CW+ RP+
Sbjct: 357 ILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMPRPENCPEELYNIMMRCWKNRPEERPT 415
Query: 368 FKTILKALNNI 378
F+ I L++
Sbjct: 416 FEYIQSVLDDF 426
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 8/63 (12%)
Query: 37 ALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSSI 96
ALYDY+AI ++LS ++GD + VL + SG+ WW K K G P+N+V+ +
Sbjct: 7 ALYDYEAIHHEDLSFQKGDQMVVLEE----SGE--WW--KARSLATRKEGYIPSNYVARV 58
Query: 97 EDI 99
+ +
Sbjct: 59 DSL 61
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 120/261 (45%), Gaps = 38/261 (14%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGPL 200
VA+K + +E+ L + ++E ++L H NIV GVC + + L L+MEY G L
Sbjct: 60 VAVKKLQHSTEEH-LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 118
Query: 201 NRVLAGRKIRPD--VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
L K R D L+ + QI +GM YL + IHRDL + N+L +ENE+
Sbjct: 119 RDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL----VENEN-- 169
Query: 259 FKTLKITDFGLAR------EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLW 312
+KI DFGL + E K + + W APE + S FS ASDVWS+GVVL+
Sbjct: 170 --RVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WYAPESLTESKFSVASDVWSFGVVLY 226
Query: 313 ELLTGEIPYKSINXXXXXX---------------XXXXNKLTLPIPSTCPQLFKTLMEAC 357
EL T KS N LP P CP +M C
Sbjct: 227 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 286
Query: 358 WEADSHMRPSFKTILKALNNI 378
W + + RPSF+ + ++ I
Sbjct: 287 WNNNVNQRPSFRDLALRVDQI 307
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 120/261 (45%), Gaps = 38/261 (14%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGPL 200
VA+K + +E+ L + ++E ++L H NIV GVC + + L L+ME+ G L
Sbjct: 45 VAVKKLQHSTEEH-LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSL 103
Query: 201 NRVLAGRKIRPD--VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
L K R D L+ + QI +GM YL + IHRDL + N+L +ENE+
Sbjct: 104 REYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL----VENEN-- 154
Query: 259 FKTLKITDFGLAR------EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLW 312
+KI DFGL + E K + + W APE + S FS ASDVWS+GVVL+
Sbjct: 155 --RVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WYAPESLTESKFSVASDVWSFGVVLY 211
Query: 313 ELLTGEIPYKSINXXXXXX---------------XXXXNKLTLPIPSTCPQLFKTLMEAC 357
EL T KS N LP P CP +M C
Sbjct: 212 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 271
Query: 358 WEADSHMRPSFKTILKALNNI 378
W + + RPSF+ + ++ I
Sbjct: 272 WNNNVNQRPSFRDLALRVDQI 292
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 106/234 (45%), Gaps = 33/234 (14%)
Query: 166 LLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL------NRVL-----------AGRK 208
L L H NI++L+G C L L +EYA G L +RVL
Sbjct: 79 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 138
Query: 209 IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFG 268
+ L+ +A +A GM+YL + IHRDL + N+L+ E KI DFG
Sbjct: 139 LSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENY--------VAKIADFG 187
Query: 269 LAR--EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSIN 325
L+R EVY M WMA E + S+++ SDVWSYGV+LWE+++ G PY +
Sbjct: 188 LSRGQEVYVKKTMGRLPV-RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 246
Query: 326 XXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIV 379
L P C LM CW + RPSF IL +LN ++
Sbjct: 247 CAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 299
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 106/234 (45%), Gaps = 33/234 (14%)
Query: 166 LLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL------NRVL-----------AGRK 208
L L H NI++L+G C L L +EYA G L +RVL
Sbjct: 69 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 128
Query: 209 IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFG 268
+ L+ +A +A GM+YL + IHRDL + N+L+ E KI DFG
Sbjct: 129 LSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENY--------VAKIADFG 177
Query: 269 LAR--EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSIN 325
L+R EVY M WMA E + S+++ SDVWSYGV+LWE+++ G PY +
Sbjct: 178 LSRGQEVYVKKTMGRLPV-RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 236
Query: 326 XXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIV 379
L P C LM CW + RPSF IL +LN ++
Sbjct: 237 CAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 289
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 119/261 (45%), Gaps = 38/261 (14%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGPL 200
VA+K + +E+ L + ++E ++L H NIV GVC + + L L+MEY G L
Sbjct: 45 VAVKKLQHSTEEH-LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 103
Query: 201 NRVLAGRKIRPD--VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
L R D L+ + QI +GM YL + IHRDL + N+L +ENE+
Sbjct: 104 RDYLQAHAERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL----VENEN-- 154
Query: 259 FKTLKITDFGLAR------EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLW 312
+KI DFGL + E K + + W APE + S FS ASDVWS+GVVL+
Sbjct: 155 --RVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WYAPESLTESKFSVASDVWSFGVVLY 211
Query: 313 ELLTGEIPYKSINXXXXXX---------------XXXXNKLTLPIPSTCPQLFKTLMEAC 357
EL T KS N LP P CP +M C
Sbjct: 212 ELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 271
Query: 358 WEADSHMRPSFKTILKALNNI 378
W + + RPSF+ + ++ I
Sbjct: 272 WNNNVNQRPSFRDLALRVDQI 292
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 90/172 (52%), Gaps = 18/172 (10%)
Query: 214 LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV 273
L+ ++ Q+A GM +L + IHRDL + N+LLSE +KI DFGLAR++
Sbjct: 201 LISYSFQVARGMEFLSSR---KCIHRDLAARNILLSEN--------NVVKICDFGLARDI 249
Query: 274 YKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINXXX 328
YK G WMAPE I I+S SDVWSYGV+LWE+ + G PY +
Sbjct: 250 YKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDE 309
Query: 329 XXXXXXXNKLTLPIPS-TCPQLFKTLMEACWEADSHMRPSFKTILKALNNIV 379
+ + P + P++++ +++ CW D RP F +++ L +++
Sbjct: 310 DFCSRLREGMRMRAPEYSTPEIYQIMLD-CWHRDPKERPRFAELVEKLGDLL 360
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 118/252 (46%), Gaps = 26/252 (10%)
Query: 133 VYKGIYE------KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSP 186
V+KG++ K V IKV + V + DH +IV L+G+C S
Sbjct: 47 VHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGS- 105
Query: 187 KLCLVMEY-ARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSS 244
L LV +Y G L+ V R + P +L++W +QIA+GM YL ++HR+L +
Sbjct: 106 SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAAR 162
Query: 245 NVLLSEPIENEDLQFKTLKITDFGLAR----EVYKTTHMSAAGTYAWMAPEVIKTSIFSK 300
NVLL P + +++ DFG+A + + + A WMA E I ++
Sbjct: 163 NVLLKSPSQ--------VQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTH 214
Query: 301 ASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWE 359
SDVWSYGV +WEL+T G PY + + L P C +M CW
Sbjct: 215 QSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGE-RLAQPQICTIDVYMVMVKCWM 273
Query: 360 ADSHMRPSFKTI 371
D ++RP+FK +
Sbjct: 274 IDENIRPTFKEL 285
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 21/260 (8%)
Query: 133 VYKG--IYEKQEVAIK---VAHPNPDENILENVKQEGKLLWL---FDHRNIVSLIGVCLQ 184
V+KG + +K VAIK + + ++E ++ + +++ +H NIV L G+
Sbjct: 35 VHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN 94
Query: 185 SPKLCLVMEYARGGPL-NRVL-AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLK 242
P++ VME+ G L +R+L I+ V + + IA G+ Y+ Q P ++HRDL+
Sbjct: 95 PPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNP-PIVHRDLR 151
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVI--KTSIFSK 300
S N+ L EN + K+ DFGL+++ + G + WMAPE I + +++
Sbjct: 152 SPNIFLQSLDENAPV---CAKVADFGLSQQSVHSVS-GLLGNFQWMAPETIGAEEESYTE 207
Query: 301 ASDVWSYGVVLWELLTGEIPYK--SINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACW 358
+D +S+ ++L+ +LTGE P+ S L IP CP + ++E CW
Sbjct: 208 KADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCW 267
Query: 359 EADSHMRPSFKTILKALNNI 378
D RP F I+K L+ +
Sbjct: 268 SGDPKKRPHFSYIVKELSEL 287
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 118/252 (46%), Gaps = 26/252 (10%)
Query: 133 VYKGIYE------KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSP 186
V+KG++ K V IKV + V + DH +IV L+G+C S
Sbjct: 29 VHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGS- 87
Query: 187 KLCLVMEY-ARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSS 244
L LV +Y G L+ V R + P +L++W +QIA+GM YL ++HR+L +
Sbjct: 88 SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAAR 144
Query: 245 NVLLSEPIENEDLQFKTLKITDFGLAREV----YKTTHMSAAGTYAWMAPEVIKTSIFSK 300
NVLL P + +++ DFG+A + + + A WMA E I ++
Sbjct: 145 NVLLKSPSQ--------VQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTH 196
Query: 301 ASDVWSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWE 359
SDVWSYGV +WEL+T G PY + + L P C +M CW
Sbjct: 197 QSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGE-RLAQPQICTIDVYMVMVKCWM 255
Query: 360 ADSHMRPSFKTI 371
D ++RP+FK +
Sbjct: 256 IDENIRPTFKEL 267
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 124/254 (48%), Gaps = 32/254 (12%)
Query: 132 KVYKGIYEK--QEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
+V+KGI + Q VAIK+ E+ +E+++QE +L D + G L+ KL
Sbjct: 38 EVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLW 97
Query: 190 LVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLS 249
++MEY GG +L + +I +G++YLH + I HRD+K++NVLLS
Sbjct: 98 IIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKI---HRDIKAANVLLS 154
Query: 250 EPIENEDLQFKTLKITDFGLAREVYKTT--HMSAAGTYAWMAPEVIKTSIFSKASDVWSY 307
E + +K+ DFG+A ++ T + GT WMAPEVI+ S + +D+WS
Sbjct: 155 EQGD--------VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSL 206
Query: 308 GVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCP--------QLFKTLMEACWE 359
G+ EL GE P ++ ++ IP P + FK ++AC
Sbjct: 207 GITAIELAKGEPPNSDMHPM---------RVLFLIPKNNPPTLVGDFTKSFKEFIDACLN 257
Query: 360 ADSHMRPSFKTILK 373
D RP+ K +LK
Sbjct: 258 KDPSFRPTAKELLK 271
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 106/234 (45%), Gaps = 33/234 (14%)
Query: 166 LLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL------NRVL-----------AGRK 208
L L H NI++L+G C L L +EYA G L +RVL
Sbjct: 76 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 135
Query: 209 IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFG 268
+ L+ +A +A GM+YL + IHR+L + N+L+ E KI DFG
Sbjct: 136 LSSQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENY--------VAKIADFG 184
Query: 269 LAR--EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSIN 325
L+R EVY M WMA E + S+++ SDVWSYGV+LWE+++ G PY +
Sbjct: 185 LSRGQEVYVKKTMGRLPV-RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 243
Query: 326 XXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIV 379
L P C LM CW + RPSF IL +LN ++
Sbjct: 244 CAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 296
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 25/250 (10%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVME 193
+KG Y+ IK + DE QE + + H +V GVC + + +V E
Sbjct: 29 WKGQYDVAVKMIKEGSMSEDEFF-----QEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83
Query: 194 YARGGPLNRVLA--GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEP 251
Y G L L G+ + P L++ + EGM +L IHRDL + N L+
Sbjct: 84 YISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLV--- 137
Query: 252 IENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YAWMAPEVIKTSIFSKASDVWSYG 308
+ DL +K++DFG+ R V ++S+ GT W APEV +S SDVW++G
Sbjct: 138 --DRDL---CVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFG 192
Query: 309 VVLWELLT-GEIPYK-SINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRP 366
+++WE+ + G++PY N ++L P ++ +M +CW RP
Sbjct: 193 ILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLAS--DTIYQIMYSCWHELPEKRP 250
Query: 367 SFKTILKALN 376
+F+ +L ++
Sbjct: 251 TFQQLLSSIE 260
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 129/260 (49%), Gaps = 21/260 (8%)
Query: 133 VYKG--IYEKQEVAIK---VAHPNPDENILENVKQEGKLLWL---FDHRNIVSLIGVCLQ 184
V+KG + +K VAIK + + ++E ++ + +++ +H NIV L G+
Sbjct: 35 VHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN 94
Query: 185 SPKLCLVMEYARGGPL-NRVL-AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLK 242
P++ VME+ G L +R+L I+ V + + IA G+ Y+ Q P ++HRDL+
Sbjct: 95 PPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNP-PIVHRDLR 151
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVI--KTSIFSK 300
S N+ L EN + K+ DFG +++ + G + WMAPE I + +++
Sbjct: 152 SPNIFLQSLDENAPV---CAKVADFGTSQQSVHSVS-GLLGNFQWMAPETIGAEEESYTE 207
Query: 301 ASDVWSYGVVLWELLTGEIPYK--SINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACW 358
+D +S+ ++L+ +LTGE P+ S L IP CP + ++E CW
Sbjct: 208 KADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCW 267
Query: 359 EADSHMRPSFKTILKALNNI 378
D RP F I+K L+ +
Sbjct: 268 SGDPKKRPHFSYIVKELSEL 287
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 125/254 (49%), Gaps = 32/254 (12%)
Query: 132 KVYKGIYEKQE--VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
+V+KGI + + VAIK+ E+ +E+++QE +L D + G L+ KL
Sbjct: 42 EVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLW 101
Query: 190 LVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLS 249
++MEY GG +L + + +I +G++YLH + I HRD+K++NVLLS
Sbjct: 102 IIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKI---HRDIKAANVLLS 158
Query: 250 EPIENEDLQFKTLKITDFGLAREVYKTT--HMSAAGTYAWMAPEVIKTSIFSKASDVWSY 307
E E +K+ DFG+A ++ T + GT WMAPEVIK S + +D+WS
Sbjct: 159 EHGE--------VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSL 210
Query: 308 GVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCP--------QLFKTLMEACWE 359
G+ EL GE P+ ++ K+ IP P + K +EAC
Sbjct: 211 GITAIELARGEPPHSELHPM---------KVLFLIPKNNPPTLEGNYSKPLKEFVEACLN 261
Query: 360 ADSHMRPSFKTILK 373
+ RP+ K +LK
Sbjct: 262 KEPSFRPTAKELLK 275
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 125/254 (49%), Gaps = 32/254 (12%)
Query: 132 KVYKGIYEKQE--VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
+V+KGI + + VAIK+ E+ +E+++QE +L D + G L+ KL
Sbjct: 22 EVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLW 81
Query: 190 LVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLS 249
++MEY GG +L + + +I +G++YLH + I HRD+K++NVLLS
Sbjct: 82 IIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKI---HRDIKAANVLLS 138
Query: 250 EPIENEDLQFKTLKITDFGLAREVYKT--THMSAAGTYAWMAPEVIKTSIFSKASDVWSY 307
E E +K+ DFG+A ++ T + GT WMAPEVIK S + +D+WS
Sbjct: 139 EHGE--------VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSL 190
Query: 308 GVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCP--------QLFKTLMEACWE 359
G+ EL GE P+ ++ K+ IP P + K +EAC
Sbjct: 191 GITAIELARGEPPHSELHPM---------KVLFLIPKNNPPTLEGNYSKPLKEFVEACLN 241
Query: 360 ADSHMRPSFKTILK 373
+ RP+ K +LK
Sbjct: 242 KEPSFRPTAKELLK 255
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 129/260 (49%), Gaps = 21/260 (8%)
Query: 133 VYKG--IYEKQEVAIK---VAHPNPDENILENVKQEGKLLWL---FDHRNIVSLIGVCLQ 184
V+KG + +K VAIK + + ++E ++ + +++ +H NIV L G+
Sbjct: 35 VHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN 94
Query: 185 SPKLCLVMEYARGGPL-NRVL-AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLK 242
P++ VME+ G L +R+L I+ V + + IA G+ Y+ Q P ++HRDL+
Sbjct: 95 PPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNP-PIVHRDLR 151
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVI--KTSIFSK 300
S N+ L EN + K+ DF L+++ + G + WMAPE I + +++
Sbjct: 152 SPNIFLQSLDENAPV---CAKVADFSLSQQSVHSVS-GLLGNFQWMAPETIGAEEESYTE 207
Query: 301 ASDVWSYGVVLWELLTGEIPYK--SINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACW 358
+D +S+ ++L+ +LTGE P+ S L IP CP + ++E CW
Sbjct: 208 KADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCW 267
Query: 359 EADSHMRPSFKTILKALNNI 378
D RP F I+K L+ +
Sbjct: 268 SGDPKKRPHFSYIVKELSEL 287
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 119/262 (45%), Gaps = 34/262 (12%)
Query: 141 QEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQ--SPKLCLVMEYARGG 198
++VA+K P N + ++K+E ++L H NIV G+C + + L+ME+ G
Sbjct: 51 EQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSG 110
Query: 199 PLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENED 256
L L K + ++ + +A+QI +GM+YL + +HRDL + NVL +E+E
Sbjct: 111 SLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVL----VESE- 162
Query: 257 LQFKTLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVL 311
+KI DFGL + + T W APE + S F ASDVWS+GV L
Sbjct: 163 ---HQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTL 219
Query: 312 WELLT-GEIPYKSINXXXXXXXXXXNKLT-------------LPIPSTCPQLFKTLMEAC 357
ELLT + + ++T LP P CP LM C
Sbjct: 220 HELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKC 279
Query: 358 WEADSHMRPSFKTILKALNNIV 379
WE R SF+ +++ ++
Sbjct: 280 WEFQPSNRTSFQNLIEGFEALL 301
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 119/262 (45%), Gaps = 34/262 (12%)
Query: 141 QEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQ--SPKLCLVMEYARGG 198
++VA+K P N + ++K+E ++L H NIV G+C + + L+ME+ G
Sbjct: 39 EQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSG 98
Query: 199 PLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENED 256
L L K + ++ + +A+QI +GM+YL + +HRDL + NVL +E+E
Sbjct: 99 SLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVL----VESE- 150
Query: 257 LQFKTLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVL 311
+KI DFGL + + T W APE + S F ASDVWS+GV L
Sbjct: 151 ---HQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTL 207
Query: 312 WELLT-GEIPYKSINXXXXXXXXXXNKLT-------------LPIPSTCPQLFKTLMEAC 357
ELLT + + ++T LP P CP LM C
Sbjct: 208 HELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKC 267
Query: 358 WEADSHMRPSFKTILKALNNIV 379
WE R SF+ +++ ++
Sbjct: 268 WEFQPSNRTSFQNLIEGFEALL 289
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 124/254 (48%), Gaps = 32/254 (12%)
Query: 132 KVYKGIYEKQE--VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
+V+KGI + + VAIK+ E+ +E+++QE +L D + G L+ KL
Sbjct: 37 EVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLW 96
Query: 190 LVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLS 249
++MEY GG +L + + +I +G++YLH + I HRD+K++NVLLS
Sbjct: 97 IIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKI---HRDIKAANVLLS 153
Query: 250 EPIENEDLQFKTLKITDFGLAREVYKTT--HMSAAGTYAWMAPEVIKTSIFSKASDVWSY 307
E E +K+ DFG+A ++ T GT WMAPEVIK S + +D+WS
Sbjct: 154 EHGE--------VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSL 205
Query: 308 GVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCP--------QLFKTLMEACWE 359
G+ EL GE P+ ++ K+ IP P + K +EAC
Sbjct: 206 GITAIELARGEPPHSELHPM---------KVLFLIPKNNPPTLEGNYSKPLKEFVEACLN 256
Query: 360 ADSHMRPSFKTILK 373
+ RP+ K +LK
Sbjct: 257 KEPSFRPTAKELLK 270
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 124/254 (48%), Gaps = 32/254 (12%)
Query: 132 KVYKGIYEKQE--VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
+V+KGI + + VAIK+ E+ +E+++QE +L D + G L+ KL
Sbjct: 22 EVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLW 81
Query: 190 LVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLS 249
++MEY GG +L + + +I +G++YLH + I HRD+K++NVLLS
Sbjct: 82 IIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKI---HRDIKAANVLLS 138
Query: 250 EPIENEDLQFKTLKITDFGLAREVYKT--THMSAAGTYAWMAPEVIKTSIFSKASDVWSY 307
E E +K+ DFG+A ++ T GT WMAPEVIK S + +D+WS
Sbjct: 139 EHGE--------VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSL 190
Query: 308 GVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCP--------QLFKTLMEACWE 359
G+ EL GE P+ ++ K+ IP P + K +EAC
Sbjct: 191 GITAIELARGEPPHSELHPM---------KVLFLIPKNNPPTLEGNYSKPLKEFVEACLN 241
Query: 360 ADSHMRPSFKTILK 373
+ RP+ K +LK
Sbjct: 242 KEPSFRPTAKELLK 255
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 100/196 (51%), Gaps = 23/196 (11%)
Query: 133 VYKGIYEKQEVAIKVAHPNPD---ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
VYKG VA+K D E + + QE K++ H N+V L+G LC
Sbjct: 47 VYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLC 106
Query: 190 LVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAE----GMNYLHCQAPISLIHRDLKSSN 245
LV Y G L L+ P + +IA+ G+N+LH IHRD+KS+N
Sbjct: 107 LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSAN 163
Query: 246 VLLSEPIENEDLQFKTLKITDFGLAR--EVYKTTHMSA--AGTYAWMAPEVIKTSIFSKA 301
+LL E T KI+DFGLAR E + T M + GT A+MAPE ++ I K
Sbjct: 164 ILLDEAF--------TAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGEITPK- 214
Query: 302 SDVWSYGVVLWELLTG 317
SD++S+GVVL E++TG
Sbjct: 215 SDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 99/196 (50%), Gaps = 23/196 (11%)
Query: 133 VYKGIYEKQEVAIKVAHPNPD---ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
VYKG VA+K D E + + QE K++ H N+V L+G LC
Sbjct: 47 VYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLC 106
Query: 190 LVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAE----GMNYLHCQAPISLIHRDLKSSN 245
LV Y G L L+ P + +IA+ G+N+LH IHRD+KS+N
Sbjct: 107 LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSAN 163
Query: 246 VLLSEPIENEDLQFKTLKITDFGLAR--EVYKTTHMSA--AGTYAWMAPEVIKTSIFSKA 301
+LL E T KI+DFGLAR E + T M GT A+MAPE ++ I K
Sbjct: 164 ILLDEAF--------TAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGEITPK- 214
Query: 302 SDVWSYGVVLWELLTG 317
SD++S+GVVL E++TG
Sbjct: 215 SDIYSFGVVLLEIITG 230
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 114/260 (43%), Gaps = 37/260 (14%)
Query: 143 VAIK-VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGP 199
VA+K + H PD+ + ++E ++L IV GV + L LVMEY G
Sbjct: 42 VAVKQLQHSGPDQQ--RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC 99
Query: 200 LNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDL 257
L L + R D L+ ++ QI +GM YL + +HRDL + N+L +E+E
Sbjct: 100 LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNIL----VESE-- 150
Query: 258 QFKTLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLW 312
+KI DFGLA+ + Y W APE + +IFS+ SDVWS+GVVL+
Sbjct: 151 --AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLY 208
Query: 313 ELLT---------GEI-----PYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACW 358
EL T E + + LP P CP LM+ CW
Sbjct: 209 ELFTYCDKSCSPSAEFLRMMGSERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCW 268
Query: 359 EADSHMRPSFKTILKALNNI 378
RPSF + L+ +
Sbjct: 269 APSPQDRPSFSALGPQLDML 288
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 118/258 (45%), Gaps = 30/258 (11%)
Query: 142 EVAIKVAH-PNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQS-----PKLCLVMEYA 195
+VA+K N + +E E + F H N++ L+GVC++ PK +++ +
Sbjct: 64 KVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFM 123
Query: 196 RGGPL------NRVLAGRKIRP-DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
+ G L +R+ G K P L+ + + IA GM YL + + +HRDL + N +L
Sbjct: 124 KYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCML 180
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMS----AAGTYAWMAPEVIKTSIFSKASDV 304
+ + T+ + DFGL++++Y + A W+A E + +++ SDV
Sbjct: 181 RDDM--------TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDV 232
Query: 305 WSYGVVLWELLT-GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSH 363
W++GV +WE+ T G PY + L P C +M +CW D
Sbjct: 233 WAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGH-RLKQPEDCLDELYEIMYSCWRTDPL 291
Query: 364 MRPSFKTILKALNNIVHS 381
RP+F + L ++ S
Sbjct: 292 DRPTFSVLRLQLEKLLES 309
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 96/196 (48%), Gaps = 23/196 (11%)
Query: 133 VYKGIYEKQEVAIKVAHPNPD---ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
VYKG VA+K D E + + QE K++ H N+V L+G LC
Sbjct: 41 VYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLC 100
Query: 190 LVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAE----GMNYLHCQAPISLIHRDLKSSN 245
LV Y G L L+ P + +IA+ G+N+LH IHRD+KS+N
Sbjct: 101 LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSAN 157
Query: 246 VLLSEPIENEDLQFKTLKITDFGLAREVYKTTH----MSAAGTYAWMAPEVIKTSIFSKA 301
+LL E T KI+DFGLAR K GT A+MAPE ++ I K
Sbjct: 158 ILLDEAF--------TAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGEITPK- 208
Query: 302 SDVWSYGVVLWELLTG 317
SD++S+GVVL E++TG
Sbjct: 209 SDIYSFGVVLLEIITG 224
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 114/260 (43%), Gaps = 37/260 (14%)
Query: 143 VAIK-VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQ--SPKLCLVMEYARGGP 199
VA+K + H PD+ + ++E ++L IV GV P+L LVMEY G
Sbjct: 39 VAVKQLQHSGPDQQ--RDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGC 96
Query: 200 LNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDL 257
L L + R D L+ ++ QI +GM YL + +HRDL + N+L +E+E
Sbjct: 97 LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNIL----VESE-- 147
Query: 258 QFKTLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLW 312
+KI DFGLA+ + W APE + +IFS+ SDVWS+GVVL+
Sbjct: 148 --AHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLY 205
Query: 313 ELLT---------GEI-----PYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACW 358
EL T E + + LP P CP LM+ CW
Sbjct: 206 ELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCW 265
Query: 359 EADSHMRPSFKTILKALNNI 378
RPSF + L+ +
Sbjct: 266 APSPQDRPSFSALGPQLDML 285
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 114/260 (43%), Gaps = 37/260 (14%)
Query: 143 VAIK-VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGP 199
VA+K + H PD+ + ++E ++L IV GV + L LVMEY G
Sbjct: 55 VAVKQLQHSGPDQQ--RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC 112
Query: 200 LNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDL 257
L L + R D L+ ++ QI +GM YL + +HRDL + N+L +E+E
Sbjct: 113 LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNIL----VESE-- 163
Query: 258 QFKTLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLW 312
+KI DFGLA+ + Y W APE + +IFS+ SDVWS+GVVL+
Sbjct: 164 --AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLY 221
Query: 313 ELLT---------GEI-----PYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACW 358
EL T E + + LP P CP LM+ CW
Sbjct: 222 ELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCW 281
Query: 359 EADSHMRPSFKTILKALNNI 378
RPSF + L+ +
Sbjct: 282 APSPQDRPSFSALGPQLDML 301
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 114/260 (43%), Gaps = 37/260 (14%)
Query: 143 VAIK-VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGP 199
VA+K + H PD+ + ++E ++L IV GV + L LVMEY G
Sbjct: 43 VAVKQLQHSGPDQQ--RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC 100
Query: 200 LNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDL 257
L L + R D L+ ++ QI +GM YL + +HRDL + N+L +E+E
Sbjct: 101 LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNIL----VESE-- 151
Query: 258 QFKTLKITDFGLAREV-----YKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLW 312
+KI DFGLA+ + Y W APE + +IFS+ SDVWS+GVVL+
Sbjct: 152 --AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLY 209
Query: 313 ELLT---------GEI-----PYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACW 358
EL T E + + LP P CP LM+ CW
Sbjct: 210 ELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCW 269
Query: 359 EADSHMRPSFKTILKALNNI 378
RPSF + L+ +
Sbjct: 270 APSPQDRPSFSALGPQLDML 289
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 26/213 (12%)
Query: 160 VKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAI 219
K E +L +H +V L KL L++++ RGG L L+ + + V + +
Sbjct: 77 TKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 136
Query: 220 -QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV--YKT 276
++A G+++LH + +I+RDLK N+LL E +K+TDFGL++E ++
Sbjct: 137 AELALGLDHLHS---LGIIYRDLKPENILLDEE--------GHIKLTDFGLSKEAIDHEK 185
Query: 277 THMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXN 336
S GT +MAPEV+ S ++D WSYGV+++E+LTG +P++ +
Sbjct: 186 KAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKA 245
Query: 337 KLTLPIPSTCPQLFKTLMEACWEADSHMRPSFK 369
KL + PQ T EA S +R FK
Sbjct: 246 KLGM------PQFLST------EAQSLLRALFK 266
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 23/202 (11%)
Query: 132 KVYKG-IYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCL 190
KVYKG + + VA+K + + E +++ + HRN++ L G C+ + L
Sbjct: 53 KVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 112
Query: 191 VMEYARGGPLNRVLAGRKIRPDVL--VDW------AIQIAEGMNYLHCQAPISLIHRDLK 242
V Y G + L + RP+ +DW A+ A G+ YLH +IHRD+K
Sbjct: 113 VYPYMANGSVASCL---RERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVK 169
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLAREV-YKTTHMSAA--GTYAWMAPEVIKTSIFS 299
++N+LL E E + DFGLA+ + YK H+ A GT +APE + T S
Sbjct: 170 AANILLDEEFEA--------VVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSS 221
Query: 300 KASDVWSYGVVLWELLTGEIPY 321
+ +DV+ YGV+L EL+TG+ +
Sbjct: 222 EKTDVFGYGVMLLELITGQRAF 243
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 94/196 (47%), Gaps = 23/196 (11%)
Query: 133 VYKGIYEKQEVAIKVAHPNPD---ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
VYKG VA+K D E + + QE K+ H N+V L+G LC
Sbjct: 38 VYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLC 97
Query: 190 LVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAE----GMNYLHCQAPISLIHRDLKSSN 245
LV Y G L L+ P + +IA+ G+N+LH IHRD+KS+N
Sbjct: 98 LVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSAN 154
Query: 246 VLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA----AGTYAWMAPEVIKTSIFSKA 301
+LL E T KI+DFGLAR K GT A+ APE ++ I K
Sbjct: 155 ILLDEAF--------TAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGEITPK- 205
Query: 302 SDVWSYGVVLWELLTG 317
SD++S+GVVL E++TG
Sbjct: 206 SDIYSFGVVLLEIITG 221
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 99/187 (52%), Gaps = 17/187 (9%)
Query: 142 EVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP-L 200
E IK + + + +E ++ E ++L DH NI+ + V + +VME GG L
Sbjct: 49 ERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELL 108
Query: 201 NRVLA----GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENED 256
R+++ G+ + + + Q+ + Y H Q ++H+DLK N+L + +
Sbjct: 109 ERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPH-- 163
Query: 257 LQFKTLKITDFGLAREVYKTTHMS--AAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWEL 314
+KI DFGLA E++K+ S AAGT +MAPEV K + K D+WS GVV++ L
Sbjct: 164 ---SPIKIIDFGLA-ELFKSDEHSTNAAGTALYMAPEVFKRDVTFKC-DIWSAGVVMYFL 218
Query: 315 LTGEIPY 321
LTG +P+
Sbjct: 219 LTGCLPF 225
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 104/197 (52%), Gaps = 24/197 (12%)
Query: 132 KVYKGIY-EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCL 190
KVYKG+ + +VA+K P + I E + L + H ++VSLIG C + ++ L
Sbjct: 54 KVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC-RHPHLVSLIGFCDERNEMIL 112
Query: 191 VMEYARGGPLNRVLAGRKIRPDVLVDW------AIQIAEGMNYLHCQAPISLIHRDLKSS 244
+ +Y G L R L G + P + + W I A G++YLH +A +IHRD+KS
Sbjct: 113 IYKYMENGNLKRHLYGSDL-PTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSI 168
Query: 245 NVLLSEPIENEDLQFKTLKITDFGLAREVYK--TTHMSAA--GTYAWMAPEVIKTSIFSK 300
N+LL E KITDFG++++ + TH+ GT ++ PE ++
Sbjct: 169 NILLDENF--------VPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTE 220
Query: 301 ASDVWSYGVVLWELLTG 317
SDV+S+GVVL+E+L
Sbjct: 221 KSDVYSFGVVLFEVLCA 237
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 104/197 (52%), Gaps = 24/197 (12%)
Query: 132 KVYKGIY-EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCL 190
KVYKG+ + +VA+K P + I E + L + H ++VSLIG C + ++ L
Sbjct: 54 KVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC-RHPHLVSLIGFCDERNEMIL 112
Query: 191 VMEYARGGPLNRVLAGRKIRPDVLVDW------AIQIAEGMNYLHCQAPISLIHRDLKSS 244
+ +Y G L R L G + P + + W I A G++YLH +A +IHRD+KS
Sbjct: 113 IYKYMENGNLKRHLYGSDL-PTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSI 168
Query: 245 NVLLSEPIENEDLQFKTLKITDFGLAREVYK--TTHMSAA--GTYAWMAPEVIKTSIFSK 300
N+LL E KITDFG++++ + TH+ GT ++ PE ++
Sbjct: 169 NILLDENF--------VPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTE 220
Query: 301 ASDVWSYGVVLWELLTG 317
SDV+S+GVVL+E+L
Sbjct: 221 KSDVYSFGVVLFEVLCA 237
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 112/239 (46%), Gaps = 22/239 (9%)
Query: 142 EVAIKVAH--PNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
+VAIK P E L+ ++E H+NIVS+I V + LVMEY G
Sbjct: 38 KVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPT 97
Query: 200 LNRVLAGRK-IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
L+ + + D +++ QI +G+ + H + ++HRD+K N+L+
Sbjct: 98 LSEYIESHGPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSN------- 147
Query: 259 FKTLKITDFGLAREVYKTTHMSAA---GTYAWMAPEVIKTSIFSKASDVWSYGVVLWELL 315
KTLKI DFG+A+ + +T+ GT + +PE K + +D++S G+VL+E+L
Sbjct: 148 -KTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEML 206
Query: 316 TGEIPYK---SINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTI 371
GE P+ +++ +T + PQ ++ E D R +KTI
Sbjct: 207 VGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANR--YKTI 263
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 20/203 (9%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
K+E+ +++ +E+ E +L + H I+ + G + ++ ++M+Y GG
Sbjct: 40 KKEIVVRLKQ-------VEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGE 92
Query: 200 LNRVLAGRKIRPD-VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
L +L + P+ V +A ++ + YLH + +I+RDLK N+LL +
Sbjct: 93 LFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKN------- 142
Query: 259 FKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGE 318
+KITDFG A+ V T+ GT ++APEV+ T ++K+ D WS+G++++E+L G
Sbjct: 143 -GHIKITDFGFAKYVPDVTY-XLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGY 200
Query: 319 IPYKSINXXXXXXXXXXNKLTLP 341
P+ N +L P
Sbjct: 201 TPFYDSNTMKTYEKILNAELRFP 223
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 23/202 (11%)
Query: 132 KVYKG-IYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCL 190
KVYKG + + VA+K + + E +++ + HRN++ L G C+ + L
Sbjct: 45 KVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 104
Query: 191 VMEYARGGPLNRVLAGRKIRPDVL--VDW------AIQIAEGMNYLHCQAPISLIHRDLK 242
V Y G + L + RP+ +DW A+ A G+ YLH +IHRD+K
Sbjct: 105 VYPYMANGSVASCL---RERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVK 161
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLAREV-YKTTHMSAA--GTYAWMAPEVIKTSIFS 299
++N+LL E E + DFGLA+ + YK H+ A G +APE + T S
Sbjct: 162 AANILLDEEFEA--------VVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSS 213
Query: 300 KASDVWSYGVVLWELLTGEIPY 321
+ +DV+ YGV+L EL+TG+ +
Sbjct: 214 EKTDVFGYGVMLLELITGQRAF 235
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 101/236 (42%), Gaps = 32/236 (13%)
Query: 153 DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRP- 211
DE +E K++ +H N++ IGV + +L + EY +GG L ++ +
Sbjct: 47 DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYP 106
Query: 212 -DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
V +A IA GM YLH +++IHRDL S N L+ E K + + DFGLA
Sbjct: 107 WSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVREN--------KNVVVADFGLA 155
Query: 271 REVY----------------KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWEL 314
R + + + G WMAPE+I + + DV+S+G+VL E+
Sbjct: 156 RLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215
Query: 315 LTGEIPYKS--INXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+ G + + L P CP F + C + D RPSF
Sbjct: 216 I-GRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSF 270
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 14/203 (6%)
Query: 174 NIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAP 233
NIV+ + L +L +VMEY GG L V+ + + + + + +LH
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN-- 135
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY--KTTHMSAAGTYAWMAPE 291
+IHRD+KS N+LL ++K+TDFG ++ ++ GT WMAPE
Sbjct: 136 -QVIHRDIKSDNILLG--------MDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPE 186
Query: 292 VIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKL-TLPIPSTCPQLF 350
V+ + D+WS G++ E++ GE PY + N N L P +F
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIF 246
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ + C E D R S K +L+
Sbjct: 247 RDFLNRCLEMDVEKRGSAKELLQ 269
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPD 212
E I ENVK+E H NIV V L L +VMEYA GG L R+ + D
Sbjct: 56 EKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED 115
Query: 213 VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR- 271
+ Q+ G++Y H + + HRDLK N LL + LKI DFG ++
Sbjct: 116 EARFFFQQLISGVSYAHA---MQVAHRDLKLENTLL------DGSPAPRLKIADFGYSKA 166
Query: 272 EVYKTTHMSAAGTYAWMAPEVI-KTSIFSKASDVWSYGVVLWELLTGEIPYK 322
V + SA GT A++APEV+ K K +DVWS GV L+ +L G P++
Sbjct: 167 SVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 98/186 (52%), Gaps = 14/186 (7%)
Query: 159 NVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWA 218
K E +L +H IV L KL L++++ RGG L L+ + + V +
Sbjct: 72 RTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY 131
Query: 219 I-QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV--YK 275
+ ++A +++LH + +I+RDLK N+LL E +K+TDFGL++E ++
Sbjct: 132 LAELALALDHLHS---LGIIYRDLKPENILLDEE--------GHIKLTDFGLSKESIDHE 180
Query: 276 TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXX 335
S GT +MAPEV+ ++++D WS+GV+++E+LTG +P++ +
Sbjct: 181 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK 240
Query: 336 NKLTLP 341
KL +P
Sbjct: 241 AKLGMP 246
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 174 NIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAP 233
NIV+ + L +L +VMEY GG L V+ + + + + + +LH
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN-- 135
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY--KTTHMSAAGTYAWMAPE 291
+IHRD+KS N+LL ++K+TDFG ++ ++ + GT WMAPE
Sbjct: 136 -QVIHRDIKSDNILLG--------MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 186
Query: 292 VIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKL-TLPIPSTCPQLF 350
V+ + D+WS G++ E++ GE PY + N N L P +F
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIF 246
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ + C + D R S K +L+
Sbjct: 247 RDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 98/188 (52%), Gaps = 26/188 (13%)
Query: 140 KQEVAI---KVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYAR 196
K+EV + +VAH + +L+N + H + +L +LC VMEYA
Sbjct: 185 KKEVIVAKDEVAHTLTENRVLQNSR----------HPFLTALKYSFQTHDRLCFVMEYAN 234
Query: 197 GGPLNRVLAGRKI-RPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
GG L L+ ++ D + +I ++YLH + ++++RDLK N++L +
Sbjct: 235 GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK--NVVYRDLKLENLMLDKD---- 288
Query: 256 DLQFKTLKITDFGLAREVYK--TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWE 313
+KITDFGL +E K T + GT ++APEV++ + + +A D W GVV++E
Sbjct: 289 ----GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 344
Query: 314 LLTGEIPY 321
++ G +P+
Sbjct: 345 MMCGRLPF 352
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 32/261 (12%)
Query: 132 KVYKGIYEK--QEVAIKVAHPNPDENILENVKQEGKLLWLFDH-RNIVSLIGVCLQ---- 184
+VYKG + K Q AIKV DE E +KQE +L + H RNI + G ++
Sbjct: 39 QVYKGRHVKTGQLAAIKVMDVTGDEE--EEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96
Query: 185 --SPKLCLVMEYARGGPLNRVLA---GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHR 239
+L LVME+ G + ++ G ++ + + +I G+++LH +IHR
Sbjct: 97 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHR 153
Query: 240 DLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT--HMSAAGTYAWMAPEVIKT-- 295
D+K NVLL+E E +K+ DFG++ ++ +T + GT WMAPEVI
Sbjct: 154 DIKGQNVLLTENAE--------VKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDE 205
Query: 296 ---SIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKT 352
+ + SD+WS G+ E+ G P ++ N + F++
Sbjct: 206 NPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQS 265
Query: 353 LMEACWEADSHMRPSFKTILK 373
+E+C + RP+ + ++K
Sbjct: 266 FIESCLVKNHSQRPATEQLMK 286
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 14/203 (6%)
Query: 174 NIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAP 233
NIV+ + L +L +VMEY GG L V+ + + + + + +LH
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN-- 136
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY--KTTHMSAAGTYAWMAPE 291
+IHRD+KS N+LL ++K+TDFG ++ ++ GT WMAPE
Sbjct: 137 -QVIHRDIKSDNILLG--------MDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPE 187
Query: 292 VIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKL-TLPIPSTCPQLF 350
V+ + D+WS G++ E++ GE PY + N N L P +F
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIF 247
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ + C E D R S K +++
Sbjct: 248 RDFLNRCLEMDVEKRGSAKELIQ 270
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 21/231 (9%)
Query: 132 KVYKGIYEKQEVAIKV---AHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL 188
K+ + I +EVAIK+ NP L+ + +E +++ + +H NIV L V L
Sbjct: 32 KLARHILTGREVAIKIIDKTQLNPTS--LQKLFREVRIMKILNHPNIVKLFEVIETEKTL 89
Query: 189 CLVMEYARGGP-LNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
L+MEYA GG + ++A +++ QI + Y H + ++HRDLK+ N+L
Sbjct: 90 YLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLL 146
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKAS-DVW 305
L + +KI DFG + E + A G + APE+ + + DVW
Sbjct: 147 LDADM--------NIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVW 198
Query: 306 SYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP--IPSTCPQLFKTLM 354
S GV+L+ L++G +P+ N K +P + + C L K +
Sbjct: 199 SLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFL 249
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 98/188 (52%), Gaps = 26/188 (13%)
Query: 140 KQEVAI---KVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYAR 196
K+EV + +VAH + +L+N + H + +L +LC VMEYA
Sbjct: 182 KKEVIVAKDEVAHTLTENRVLQNSR----------HPFLTALKYSFQTHDRLCFVMEYAN 231
Query: 197 GGPLNRVLAGRKI-RPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
GG L L+ ++ D + +I ++YLH + ++++RDLK N++L +
Sbjct: 232 GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK--NVVYRDLKLENLMLDKD---- 285
Query: 256 DLQFKTLKITDFGLAREVYK--TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWE 313
+KITDFGL +E K T + GT ++APEV++ + + +A D W GVV++E
Sbjct: 286 ----GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 341
Query: 314 LLTGEIPY 321
++ G +P+
Sbjct: 342 MMCGRLPF 349
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 98/185 (52%), Gaps = 14/185 (7%)
Query: 160 VKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAI 219
K E +L +H IV L KL L++++ RGG L L+ + + V + +
Sbjct: 73 TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 132
Query: 220 -QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV--YKT 276
++A +++LH + +I+RDLK N+LL E +K+TDFGL++E ++
Sbjct: 133 AELALALDHLHS---LGIIYRDLKPENILLDEE--------GHIKLTDFGLSKESIDHEK 181
Query: 277 THMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXN 336
S GT +MAPEV+ ++++D WS+GV+++E+LTG +P++ +
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
Query: 337 KLTLP 341
KL +P
Sbjct: 242 KLGMP 246
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 84/156 (53%), Gaps = 13/156 (8%)
Query: 170 FDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLH 229
+ H N+V + L +L ++ME+ +GG L +++ ++ + + + + + YLH
Sbjct: 99 YQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLH 158
Query: 230 CQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT--HMSAAGTYAW 287
Q +IHRD+KS ++LL+ +K++DFG ++ K GT W
Sbjct: 159 AQG---VIHRDIKSDSILLTLD--------GRVKLSDFGFCAQISKDVPKRKXLVGTPYW 207
Query: 288 MAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKS 323
MAPEVI S+++ D+WS G+++ E++ GE PY S
Sbjct: 208 MAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFS 243
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 19/230 (8%)
Query: 132 KVYKGIYEKQEVAIKVAHPNP-DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCL 190
K+ + I +EVA+K+ + + L+ + +E +++ + +H NIV L V L L
Sbjct: 31 KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYL 90
Query: 191 VMEYARGGPLNRVLA--GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
VMEYA GG + L GR + + QI + Y H + ++HRDLK+ N+LL
Sbjct: 91 VMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLLL 146
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKAS-DVWS 306
+ +KI DFG + E + A G + APE+ + + DVWS
Sbjct: 147 DADM--------NIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWS 198
Query: 307 YGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP--IPSTCPQLFKTLM 354
GV+L+ L++G +P+ N K +P + + C L K +
Sbjct: 199 LGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL 248
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 98/185 (52%), Gaps = 14/185 (7%)
Query: 160 VKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAI 219
K E +L +H IV L KL L++++ RGG L L+ + + V + +
Sbjct: 74 TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 133
Query: 220 -QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV--YKT 276
++A +++LH + +I+RDLK N+LL E +K+TDFGL++E ++
Sbjct: 134 AELALALDHLHS---LGIIYRDLKPENILLDEE--------GHIKLTDFGLSKESIDHEK 182
Query: 277 THMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXN 336
S GT +MAPEV+ ++++D WS+GV+++E+LTG +P++ +
Sbjct: 183 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 242
Query: 337 KLTLP 341
KL +P
Sbjct: 243 KLGMP 247
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 14/203 (6%)
Query: 174 NIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAP 233
NIV+ + L +L +VMEY GG L V+ + + + + + +LH
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN-- 135
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY--KTTHMSAAGTYAWMAPE 291
+IHRD+KS N+LL ++K+TDFG ++ ++ GT WMAPE
Sbjct: 136 -QVIHRDIKSDNILLG--------MDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPE 186
Query: 292 VIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKL-TLPIPSTCPQLF 350
V+ + D+WS G++ E++ GE PY + N N L P +F
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIF 246
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ + C + D R S K +L+
Sbjct: 247 RDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 97/188 (51%), Gaps = 26/188 (13%)
Query: 140 KQEVAI---KVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYAR 196
K+EV + +VAH + +L+N + H + +L +LC VMEYA
Sbjct: 43 KKEVIVAKDEVAHTLTENRVLQNSR----------HPFLTALKYSFQTHDRLCFVMEYAN 92
Query: 197 GGPLNRVLAGRKI-RPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
GG L L+ ++ D + +I ++YLH + ++++RDLK N++L +
Sbjct: 93 GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK--NVVYRDLKLENLMLDKD---- 146
Query: 256 DLQFKTLKITDFGLAREVYK--TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWE 313
+KITDFGL +E K T GT ++APEV++ + + +A D W GVV++E
Sbjct: 147 ----GHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 202
Query: 314 LLTGEIPY 321
++ G +P+
Sbjct: 203 MMCGRLPF 210
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 97/188 (51%), Gaps = 26/188 (13%)
Query: 140 KQEVAI---KVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYAR 196
K+EV + +VAH + +L+N + H + +L +LC VMEYA
Sbjct: 44 KKEVIVAKDEVAHTLTENRVLQNSR----------HPFLTALKYSFQTHDRLCFVMEYAN 93
Query: 197 GGPLNRVLAGRKI-RPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
GG L L+ ++ D + +I ++YLH + ++++RDLK N++L +
Sbjct: 94 GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK--NVVYRDLKLENLMLDKD---- 147
Query: 256 DLQFKTLKITDFGLAREVYK--TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWE 313
+KITDFGL +E K T GT ++APEV++ + + +A D W GVV++E
Sbjct: 148 ----GHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 203
Query: 314 LLTGEIPY 321
++ G +P+
Sbjct: 204 MMCGRLPF 211
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 97/188 (51%), Gaps = 26/188 (13%)
Query: 140 KQEVAI---KVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYAR 196
K+EV + +VAH + +L+N + H + +L +LC VMEYA
Sbjct: 42 KKEVIVAKDEVAHTLTENRVLQNSR----------HPFLTALKYSFQTHDRLCFVMEYAN 91
Query: 197 GGPLNRVLAGRKI-RPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
GG L L+ ++ D + +I ++YLH + ++++RDLK N++L +
Sbjct: 92 GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK--NVVYRDLKLENLMLDKD---- 145
Query: 256 DLQFKTLKITDFGLAREVYK--TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWE 313
+KITDFGL +E K T GT ++APEV++ + + +A D W GVV++E
Sbjct: 146 ----GHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 201
Query: 314 LLTGEIPY 321
++ G +P+
Sbjct: 202 MMCGRLPF 209
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 144 AIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRV 203
A AH + NILE VK H IV LI KL L++EY GG L
Sbjct: 62 AKDTAHTKAERNILEEVK----------HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQ 111
Query: 204 LAGRKI-RPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTL 262
L I D + +I+ + +LH + +I+RDLK N++L+ +
Sbjct: 112 LEREGIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQ--------GHV 160
Query: 263 KITDFGLAREVYK--TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIP 320
K+TDFGL +E T + GT +MAPE++ S ++A D WS G +++++LTG P
Sbjct: 161 KLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
Query: 321 YKSINXXXXXXXXXXNKLTLP 341
+ N KL LP
Sbjct: 221 FTGENRKKTIDKILKCKLNLP 241
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 21/231 (9%)
Query: 132 KVYKGIYEKQEVAIKV---AHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL 188
K+ + I +EVAIK+ NP L+ + +E +++ + +H NIV L V L
Sbjct: 29 KLARHILTGREVAIKIIDKTQLNPTS--LQKLFREVRIMKILNHPNIVKLFEVIETEKTL 86
Query: 189 CLVMEYARGGP-LNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
L+MEYA GG + ++A +++ QI + Y H + ++HRDLK+ N+L
Sbjct: 87 YLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLL 143
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHM-SAAGTYAWMAPEVIKTSIFSKAS-DVW 305
L + +KI DFG + E + + G+ + APE+ + + DVW
Sbjct: 144 LDADM--------NIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVW 195
Query: 306 SYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP--IPSTCPQLFKTLM 354
S GV+L+ L++G +P+ N K +P + + C L K +
Sbjct: 196 SLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFL 246
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 174 NIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAP 233
NIV+ + L +L +VMEY GG L V+ + + + + + +LH
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN-- 136
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY--KTTHMSAAGTYAWMAPE 291
+IHR++KS N+LL ++K+TDFG ++ ++ + GT WMAPE
Sbjct: 137 -QVIHRNIKSDNILLG--------MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 187
Query: 292 VIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKL-TLPIPSTCPQLF 350
V+ + D+WS G++ E++ GE PY + N N L P +F
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIF 247
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ + C E D R S K +++
Sbjct: 248 RDFLNRCLEMDVEKRGSAKELIQ 270
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 108/230 (46%), Gaps = 19/230 (8%)
Query: 132 KVYKGIYEKQEVAIKVAHPNP-DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCL 190
K+ + I +EVA+K+ + + L+ + +E +++ + +H NIV L V L L
Sbjct: 31 KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYL 90
Query: 191 VMEYARGGPLNRVLA--GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
VMEYA GG + L GR + + QI + Y H + ++HRDLK+ N+LL
Sbjct: 91 VMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLLL 146
Query: 249 SEPIENEDLQFKTLKITDFGLARE-VYKTTHMSAAGTYAWMAPEVIKTSIFSKAS-DVWS 306
+ +KI DFG + E + + G+ + APE+ + + DVWS
Sbjct: 147 DADM--------NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWS 198
Query: 307 YGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP--IPSTCPQLFKTLM 354
GV+L+ L++G +P+ N K +P + + C L K +
Sbjct: 199 LGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL 248
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 85/172 (49%), Gaps = 12/172 (6%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPD 212
E I ENVK+E H NIV V L L +VMEYA GG L R+ + D
Sbjct: 55 EKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED 114
Query: 213 VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE 272
+ Q+ G++Y H + + HRDLK N LL + LKI DFG ++
Sbjct: 115 EARFFFQQLISGVSYCHA---MQVCHRDLKLENTLL------DGSPAPRLKICDFGYSKS 165
Query: 273 -VYKTTHMSAAGTYAWMAPEVI-KTSIFSKASDVWSYGVVLWELLTGEIPYK 322
V + S GT A++APEV+ K K +DVWS GV L+ +L G P++
Sbjct: 166 SVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 217
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 108/230 (46%), Gaps = 19/230 (8%)
Query: 132 KVYKGIYEKQEVAIKVAHPNP-DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCL 190
K+ + I +EVA+K+ + + L+ + +E +++ + +H NIV L V L L
Sbjct: 31 KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYL 90
Query: 191 VMEYARGGPLNRVLA--GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
VMEYA GG + L GR + + QI + Y H + ++HRDLK+ N+LL
Sbjct: 91 VMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLLL 146
Query: 249 SEPIENEDLQFKTLKITDFGLARE-VYKTTHMSAAGTYAWMAPEVIKTSIFSKAS-DVWS 306
+ +KI DFG + E + + G+ + APE+ + + DVWS
Sbjct: 147 DADM--------NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWS 198
Query: 307 YGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP--IPSTCPQLFKTLM 354
GV+L+ L++G +P+ N K +P + + C L K +
Sbjct: 199 LGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL 248
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 92/201 (45%), Gaps = 24/201 (11%)
Query: 144 AIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRV 203
A AH + NILE VK H IV LI KL L++EY GG L
Sbjct: 62 AKDTAHTKAERNILEEVK----------HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQ 111
Query: 204 LAGRKI-RPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTL 262
L I D + +I+ + +LH + +I+RDLK N++L+ +
Sbjct: 112 LEREGIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQ--------GHV 160
Query: 263 KITDFGLAREVYK--TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIP 320
K+TDFGL +E T GT +MAPE++ S ++A D WS G +++++LTG P
Sbjct: 161 KLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
Query: 321 YKSINXXXXXXXXXXNKLTLP 341
+ N KL LP
Sbjct: 221 FTGENRKKTIDKILKCKLNLP 241
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 13/154 (8%)
Query: 170 FDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLH 229
+ H N+V + L +L +VME+ GG L ++ ++ + + + + ++YLH
Sbjct: 99 YHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLH 158
Query: 230 CQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT--HMSAAGTYAW 287
Q +IHRD+KS ++LL+ +K++DFG +V K GT W
Sbjct: 159 NQG---VIHRDIKSDSILLTSD--------GRIKLSDFGFCAQVSKEVPKRKXLVGTPYW 207
Query: 288 MAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
MAPEVI + D+WS G+++ E++ GE PY
Sbjct: 208 MAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPY 241
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 12/207 (5%)
Query: 140 KQEVAIKVAHPNPDENI-LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+QE A+KV + +N + +E +LL DH NI+ L + S +V E GG
Sbjct: 47 QQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106
Query: 199 PL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDL 257
L + ++ ++ Q+ G+ Y+H +++HRDLK N+LL ++ D+
Sbjct: 107 ELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDI 163
Query: 258 QFKTLKITDFGLAREVYKTTHM-SAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
KI DFGL+ + T M GT ++APEV++ + + + DVWS GV+L+ LL+
Sbjct: 164 -----KIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLS 217
Query: 317 GEIPYKSINXXXXXXXXXXNKLTLPIP 343
G P+ N K +P
Sbjct: 218 GTPPFYGKNEYDILKRVETGKYAFDLP 244
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 19/230 (8%)
Query: 132 KVYKGIYEKQEVAIKVAHPNP-DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCL 190
K+ + I +EVA+++ + + L+ + +E +++ + +H NIV L V L L
Sbjct: 31 KLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYL 90
Query: 191 VMEYARGGPLNRVLA--GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
VMEYA GG + L GR + + QI + Y H + ++HRDLK+ N+LL
Sbjct: 91 VMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLLL 146
Query: 249 SEPIENEDLQFKTLKITDFGLARE-VYKTTHMSAAGTYAWMAPEVIKTSIFSKAS-DVWS 306
+ +KI DFG + E + + G+ + APE+ + + DVWS
Sbjct: 147 DADM--------NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWS 198
Query: 307 YGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP--IPSTCPQLFKTLM 354
GV+L+ L++G +P+ N K +P + + C L K +
Sbjct: 199 LGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL 248
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 84/172 (48%), Gaps = 12/172 (6%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPD 212
E I NVK+E H NIV V L L +VMEYA GG L R+ + D
Sbjct: 56 EKIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED 115
Query: 213 VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE 272
+ Q+ G++Y H + + HRDLK N LL + LKI DFG ++
Sbjct: 116 EARFFFQQLISGVSYCHA---MQVCHRDLKLENTLL------DGSPAPRLKICDFGYSKS 166
Query: 273 -VYKTTHMSAAGTYAWMAPEVI-KTSIFSKASDVWSYGVVLWELLTGEIPYK 322
V + S GT A++APEV+ K K +DVWS GV L+ +L G P++
Sbjct: 167 SVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 90/164 (54%), Gaps = 16/164 (9%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK---IRPDVL 214
E ++E +L H NIV ++ L +VM+Y GG L + + +K + D +
Sbjct: 68 EESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI 127
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+DW +QI + ++H + ++HRD+KS N+ L++ T+++ DFG+AR +
Sbjct: 128 LDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKD--------GTVQLGDFGIARVLN 176
Query: 275 KTTHMSAA--GTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
T ++ A GT +++PE+ + ++ SD+W+ G VL+EL T
Sbjct: 177 STVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT 220
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 12/207 (5%)
Query: 140 KQEVAIKVAHPNPDENI-LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+QE A+KV + +N + +E +LL DH NI+ L + S +V E GG
Sbjct: 47 QQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106
Query: 199 PL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDL 257
L + ++ ++ Q+ G+ Y+H +++HRDLK N+LL ++ D+
Sbjct: 107 ELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDI 163
Query: 258 QFKTLKITDFGLAREVYKTTHM-SAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
KI DFGL+ + T M GT ++APEV++ + + + DVWS GV+L+ LL+
Sbjct: 164 -----KIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLS 217
Query: 317 GEIPYKSINXXXXXXXXXXNKLTLPIP 343
G P+ N K +P
Sbjct: 218 GTPPFYGKNEYDILKRVETGKYAFDLP 244
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 19/230 (8%)
Query: 132 KVYKGIYEKQEVAIKVAHPNP-DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCL 190
K+ + I +EVA+++ + + L+ + +E +++ + +H NIV L V L L
Sbjct: 31 KLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYL 90
Query: 191 VMEYARGGPLNRVLA--GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
VMEYA GG + L GR + + QI + Y H + ++HRDLK+ N+LL
Sbjct: 91 VMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLLL 146
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKAS-DVWS 306
+ +KI DFG + E + G+ + APE+ + + DVWS
Sbjct: 147 DADM--------NIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWS 198
Query: 307 YGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP--IPSTCPQLFKTLM 354
GV+L+ L++G +P+ N K +P + + C L K +
Sbjct: 199 LGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL 248
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 12/207 (5%)
Query: 140 KQEVAIKVAHPNPDENI-LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+QE A+KV + +N + +E +LL DH NI+ L + S +V E GG
Sbjct: 47 QQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106
Query: 199 PL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDL 257
L + ++ ++ Q+ G+ Y+H +++HRDLK N+LL ++ D+
Sbjct: 107 ELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDI 163
Query: 258 QFKTLKITDFGLAREVYKTTHM-SAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
KI DFGL+ + T M GT ++APEV++ + + + DVWS GV+L+ LL+
Sbjct: 164 -----KIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLS 217
Query: 317 GEIPYKSINXXXXXXXXXXNKLTLPIP 343
G P+ N K +P
Sbjct: 218 GTPPFYGKNEYDILKRVETGKYAFDLP 244
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 122/254 (48%), Gaps = 24/254 (9%)
Query: 132 KVYKGIYEKQEV--AIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
KVYK ++ A KV +E LE+ E ++L DH IV L+G KL
Sbjct: 34 KVYKAKNKETGALAAAKVIETKSEEE-LEDYIVEIEILATCDHPYIVKLLGAYYHDGKLW 92
Query: 190 LVMEYARGGPLNRVL--AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+++E+ GG ++ ++ R + + Q+ E +N+LH + +IHRDLK+ NVL
Sbjct: 93 IMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVL 149
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHM--SAAGTYAWMAPEVI-----KTSIFSK 300
++ +E + +++ DFG++ + KT S GT WMAPEV+ K + +
Sbjct: 150 MT--LEGD------IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDY 201
Query: 301 ASDVWSYGVVLWELLTGEIPYKSIN-XXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWE 359
+D+WS G+ L E+ E P+ +N + TL PS F+ ++ +
Sbjct: 202 KADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALD 261
Query: 360 ADSHMRPSFKTILK 373
+ RPS +L+
Sbjct: 262 KNPETRPSAAQLLE 275
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 122/254 (48%), Gaps = 24/254 (9%)
Query: 132 KVYKGIYEKQEV--AIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
KVYK ++ A KV +E LE+ E ++L DH IV L+G KL
Sbjct: 26 KVYKAKNKETGALAAAKVIETKSEEE-LEDYIVEIEILATCDHPYIVKLLGAYYHDGKLW 84
Query: 190 LVMEYARGGPLNRVL--AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+++E+ GG ++ ++ R + + Q+ E +N+LH + +IHRDLK+ NVL
Sbjct: 85 IMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVL 141
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHM--SAAGTYAWMAPEVI-----KTSIFSK 300
++ +E + +++ DFG++ + KT S GT WMAPEV+ K + +
Sbjct: 142 MT--LEGD------IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDY 193
Query: 301 ASDVWSYGVVLWELLTGEIPYKSIN-XXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWE 359
+D+WS G+ L E+ E P+ +N + TL PS F+ ++ +
Sbjct: 194 KADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALD 253
Query: 360 ADSHMRPSFKTILK 373
+ RPS +L+
Sbjct: 254 KNPETRPSAAQLLE 267
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 94/193 (48%), Gaps = 37/193 (19%)
Query: 140 KQEVAI---KVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYAR 196
++EV I +VAH + +L+N + H + +L +LC VMEYA
Sbjct: 39 RKEVIIAKDEVAHTVTESRVLQNTR----------HPFLTALKYAFQTHDRLCFVMEYAN 88
Query: 197 GGPL------NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSE 250
GG L RV + R + +I + YLH + +++RD+K N++L +
Sbjct: 89 GGELFFHLSRERVFTEERARF-----YGAEIVSALEYLHSR---DVVYRDIKLENLMLDK 140
Query: 251 PIENEDLQFKTLKITDFGLAREVYK--TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYG 308
+KITDFGL +E T + GT ++APEV++ + + +A D W G
Sbjct: 141 D--------GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 309 VVLWELLTGEIPY 321
VV++E++ G +P+
Sbjct: 193 VVMYEMMCGRLPF 205
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 13/154 (8%)
Query: 170 FDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLH 229
+ H N+V + L +L +VME+ GG L ++ ++ + + + + + ++ LH
Sbjct: 205 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH 264
Query: 230 CQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT--HMSAAGTYAW 287
Q +IHRD+KS ++LL+ +K++DFG +V K GT W
Sbjct: 265 AQG---VIHRDIKSDSILLT--------HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 313
Query: 288 MAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
MAPE+I + D+WS G+++ E++ GE PY
Sbjct: 314 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 347
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 94/193 (48%), Gaps = 37/193 (19%)
Query: 140 KQEVAI---KVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYAR 196
++EV I +VAH + +L+N + H + +L +LC VMEYA
Sbjct: 42 RKEVIIAKDEVAHTVTESRVLQNTR----------HPFLTALKYAFQTHDRLCFVMEYAN 91
Query: 197 GGPL------NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSE 250
GG L RV + R + +I + YLH + +++RD+K N++L +
Sbjct: 92 GGELFFHLSRERVFTEERARF-----YGAEIVSALEYLHSR---DVVYRDIKLENLMLDK 143
Query: 251 PIENEDLQFKTLKITDFGLAREVYK--TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYG 308
+KITDFGL +E T + GT ++APEV++ + + +A D W G
Sbjct: 144 D--------GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG 195
Query: 309 VVLWELLTGEIPY 321
VV++E++ G +P+
Sbjct: 196 VVMYEMMCGRLPF 208
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 94/193 (48%), Gaps = 37/193 (19%)
Query: 140 KQEVAI---KVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYAR 196
++EV I +VAH + +L+N + H + +L +LC VMEYA
Sbjct: 39 RKEVIIAKDEVAHTVTESRVLQNTR----------HPFLTALKYAFQTHDRLCFVMEYAN 88
Query: 197 GGPL------NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSE 250
GG L RV + R + +I + YLH + +++RD+K N++L +
Sbjct: 89 GGELFFHLSRERVFTEERARF-----YGAEIVSALEYLHSR---DVVYRDIKLENLMLDK 140
Query: 251 PIENEDLQFKTLKITDFGLAREVYK--TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYG 308
+KITDFGL +E T + GT ++APEV++ + + +A D W G
Sbjct: 141 D--------GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 309 VVLWELLTGEIPY 321
VV++E++ G +P+
Sbjct: 193 VVMYEMMCGRLPF 205
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 84/172 (48%), Gaps = 12/172 (6%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPD 212
E I ENVK+E H NIV V L L +VMEYA GG L R+ + D
Sbjct: 56 EKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED 115
Query: 213 VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE 272
+ Q+ G++Y H + + HRDLK N LL + LKI FG ++
Sbjct: 116 EARFFFQQLISGVSYCHA---MQVCHRDLKLENTLL------DGSPAPRLKICAFGYSKS 166
Query: 273 -VYKTTHMSAAGTYAWMAPEVI-KTSIFSKASDVWSYGVVLWELLTGEIPYK 322
V + S GT A++APEV+ K K +DVWS GV L+ +L G P++
Sbjct: 167 SVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 13/154 (8%)
Query: 170 FDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLH 229
+ H N+V + L +L +VME+ GG L ++ ++ + + + + + ++ LH
Sbjct: 83 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH 142
Query: 230 CQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT--HMSAAGTYAW 287
Q +IHRD+KS ++LL+ +K++DFG +V K GT W
Sbjct: 143 AQG---VIHRDIKSDSILLTHD--------GRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 191
Query: 288 MAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
MAPE+I + D+WS G+++ E++ GE PY
Sbjct: 192 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 225
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 13/154 (8%)
Query: 170 FDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLH 229
+ H N+V + L +L +VME+ GG L ++ ++ + + + + + ++ LH
Sbjct: 128 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH 187
Query: 230 CQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT--HMSAAGTYAW 287
Q +IHRD+KS ++LL+ +K++DFG +V K GT W
Sbjct: 188 AQG---VIHRDIKSDSILLTHD--------GRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 236
Query: 288 MAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
MAPE+I + D+WS G+++ E++ GE PY
Sbjct: 237 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 270
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 37/193 (19%)
Query: 140 KQEVAI---KVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYAR 196
++EV I +VAH + +L+N + H + +L +LC VMEYA
Sbjct: 44 RKEVIIAKDEVAHTVTESRVLQNTR----------HPFLTALKYAFQTHDRLCFVMEYAN 93
Query: 197 GGPL------NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSE 250
GG L RV + R + +I + YLH + +++RD+K N++L +
Sbjct: 94 GGELFFHLSRERVFTEERARF-----YGAEIVSALEYLHSR---DVVYRDIKLENLMLDK 145
Query: 251 PIENEDLQFKTLKITDFGLAREVYK--TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYG 308
+KITDFGL +E T GT ++APEV++ + + +A D W G
Sbjct: 146 D--------GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 197
Query: 309 VVLWELLTGEIPY 321
VV++E++ G +P+
Sbjct: 198 VVMYEMMCGRLPF 210
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 13/154 (8%)
Query: 170 FDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLH 229
+ H N+V + L +L +VME+ GG L ++ ++ + + + + + ++ LH
Sbjct: 85 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH 144
Query: 230 CQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT--HMSAAGTYAW 287
Q +IHRD+KS ++LL+ +K++DFG +V K GT W
Sbjct: 145 AQG---VIHRDIKSDSILLTHD--------GRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 193
Query: 288 MAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
MAPE+I + D+WS G+++ E++ GE PY
Sbjct: 194 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 227
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 37/193 (19%)
Query: 140 KQEVAI---KVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYAR 196
++EV I +VAH + +L+N + H + +L +LC VMEYA
Sbjct: 39 RKEVIIAKDEVAHTVTESRVLQNTR----------HPFLTALKYAFQTHDRLCFVMEYAN 88
Query: 197 GGPL------NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSE 250
GG L RV + R + +I + YLH + +++RD+K N++L +
Sbjct: 89 GGELFFHLSRERVFTEERARF-----YGAEIVSALEYLHSR---DVVYRDIKLENLMLDK 140
Query: 251 PIENEDLQFKTLKITDFGLAREVYK--TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYG 308
+KITDFGL +E T GT ++APEV++ + + +A D W G
Sbjct: 141 D--------GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 309 VVLWELLTGEIPY 321
VV++E++ G +P+
Sbjct: 193 VVMYEMMCGRLPF 205
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 37/193 (19%)
Query: 140 KQEVAI---KVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYAR 196
++EV I +VAH + +L+N + H + +L +LC VMEYA
Sbjct: 39 RKEVIIAKDEVAHTVTESRVLQNTR----------HPFLTALKYAFQTHDRLCFVMEYAN 88
Query: 197 GGPL------NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSE 250
GG L RV + R + +I + YLH + +++RD+K N++L +
Sbjct: 89 GGELFFHLSRERVFTEERARF-----YGAEIVSALEYLHSR---DVVYRDIKLENLMLDK 140
Query: 251 PIENEDLQFKTLKITDFGLAREVYK--TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYG 308
+KITDFGL +E T GT ++APEV++ + + +A D W G
Sbjct: 141 D--------GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 309 VVLWELLTGEIPY 321
VV++E++ G +P+
Sbjct: 193 VVMYEMMCGRLPF 205
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 13/154 (8%)
Query: 170 FDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLH 229
+ H N+V + L +L +VME+ GG L ++ ++ + + + + + ++ LH
Sbjct: 74 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH 133
Query: 230 CQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT--HMSAAGTYAW 287
Q +IHRD+KS ++LL+ +K++DFG +V K GT W
Sbjct: 134 AQG---VIHRDIKSDSILLTHD--------GRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 182
Query: 288 MAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
MAPE+I + D+WS G+++ E++ GE PY
Sbjct: 183 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 216
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 13/154 (8%)
Query: 170 FDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLH 229
+ H N+V + L +L +VME+ GG L ++ ++ + + + + + ++ LH
Sbjct: 78 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH 137
Query: 230 CQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT--HMSAAGTYAW 287
Q +IHRD+KS ++LL+ +K++DFG +V K GT W
Sbjct: 138 AQG---VIHRDIKSDSILLTHD--------GRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 186
Query: 288 MAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
MAPE+I + D+WS G+++ E++ GE PY
Sbjct: 187 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 220
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 132 KVYKGIYEKQEVAIKV---AHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL 188
K+ + + +EVA+K+ NP L+ + +E +++ + +H NIV L V L
Sbjct: 32 KLARHVLTGREVAVKIIDKTQLNPTS--LQKLFREVRIMKILNHPNIVKLFEVIETEKTL 89
Query: 189 CLVMEYARGGPLNRVLA--GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNV 246
LVMEYA GG + L GR + + QI + Y H + ++HRDLK+ N+
Sbjct: 90 YLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQK---YIVHRDLKAENL 145
Query: 247 LLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKAS-DV 304
LL + +KI DFG + E + G+ + APE+ + + DV
Sbjct: 146 LLDGDM--------NIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDV 197
Query: 305 WSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPI 342
WS GV+L+ L++G +P+ N K +P
Sbjct: 198 WSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF 235
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 37/193 (19%)
Query: 140 KQEVAI---KVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYAR 196
++EV I +VAH + +L+N + H + +L +LC VMEYA
Sbjct: 39 RKEVIIAKDEVAHTVTESRVLQNTR----------HPFLTALKYAFQTHDRLCFVMEYAN 88
Query: 197 GGPL------NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSE 250
GG L RV + R + +I + YLH + +++RD+K N++L +
Sbjct: 89 GGELFFHLSRERVFTEERARF-----YGAEIVSALEYLHSR---DVVYRDIKLENLMLDK 140
Query: 251 PIENEDLQFKTLKITDFGLAREVYK--TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYG 308
+KITDFGL +E T GT ++APEV++ + + +A D W G
Sbjct: 141 D--------GHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 309 VVLWELLTGEIPY 321
VV++E++ G +P+
Sbjct: 193 VVMYEMMCGRLPF 205
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 90/173 (52%), Gaps = 20/173 (11%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPK---LCLVMEYARGGPLNRVLAGRKIRPDV 213
+E V QE +L DH N+V L+ V L P L +V E GP+ V + + D
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEV-LDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQ 138
Query: 214 LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV 273
+ + +G+ YLH Q +IHRD+K SN+L+ E +KI DFG++ E
Sbjct: 139 ARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGED--------GHIKIADFGVSNEF 187
Query: 274 YKTTHM--SAAGTYAWMAPEVIKTS--IFS-KASDVWSYGVVLWELLTGEIPY 321
+ + + GT A+MAPE + + IFS KA DVW+ GV L+ + G+ P+
Sbjct: 188 KGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 90/172 (52%), Gaps = 15/172 (8%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQS-PKLCLVMEYARGGPL-NRVLAGRKIRP 211
++ +E E ++L L D ++ + C Q+ +L VMEY GG L + K +
Sbjct: 60 DDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKE 119
Query: 212 DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR 271
V +A +I+ G+ +LH + +I+RDLK NV+L +KI DFG+ +
Sbjct: 120 PQAVFYAAEISIGLFFLHKRG---IIYRDLKLDNVMLDSE--------GHIKIADFGMCK 168
Query: 272 E--VYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
E + T GT ++APE+I + K+ D W+YGV+L+E+L G+ P+
Sbjct: 169 EHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF 220
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 19/230 (8%)
Query: 132 KVYKGIYEKQEVAIKVAHPNP-DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCL 190
K+ + I +EVA+K+ + + L+ + +E ++ + +H NIV L V L L
Sbjct: 31 KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYL 90
Query: 191 VMEYARGGPLNRVLA--GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
V EYA GG + L GR + + QI + Y H + ++HRDLK+ N+LL
Sbjct: 91 VXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLLL 146
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKAS-DVWS 306
+KI DFG + E + A G + APE+ + + DVWS
Sbjct: 147 DAD--------XNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWS 198
Query: 307 YGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPI--PSTCPQLFKTLM 354
GV+L+ L++G +P+ N K +P + C L K +
Sbjct: 199 LGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXSTDCENLLKKFL 248
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 27/263 (10%)
Query: 133 VYKGIYEKQEVAIKVAH-PNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV 191
VY G +V I + P D + + +E L H+NIV +G ++ + +
Sbjct: 38 VYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIF 97
Query: 192 MEYARGGPLNRVLAGR----KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
ME GG L+ +L + K + + QI EG+ YLH ++HRD+K NVL
Sbjct: 98 MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVL 154
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAA--GTYAWMAPEVIKTS--IFSKASD 303
+ + LKI+DFG ++ + + GT +MAPE+I + KA+D
Sbjct: 155 I-------NTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAAD 207
Query: 304 VWSYGVVLWELLTGEIPYKSINX-XXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADS 362
+WS G + E+ TG+ P+ + K+ IP + K + C+E D
Sbjct: 208 IWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDP 267
Query: 363 HMRPSFKTILKALNNIVHSEFIQ 385
R N+++ EF++
Sbjct: 268 DKRA-------CANDLLVDEFLK 283
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 122/257 (47%), Gaps = 30/257 (11%)
Query: 132 KVYKGIYEKQEV--AIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
KVYK ++ V A KV +E LE+ E +L DH NIV L+ L
Sbjct: 52 KVYKAQNKETSVLAAAKVIDTKSEEE-LEDYMVEIDILASCDHPNIVKLLDAFYYENNLW 110
Query: 190 LVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIA-----EGMNYLHCQAPISLIHRDLKSS 244
+++E+ GG ++ V+ + RP L + IQ+ + +NYLH +IHRDLK+
Sbjct: 111 ILIEFCAGGAVDAVMLELE-RP--LTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAG 164
Query: 245 NVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM--SAAGTYAWMAPEVI-----KTSI 297
N+L + ++ + +K+ DFG++ + +T S GT WMAPEV+ K
Sbjct: 165 NILFT--LDGD------IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 298 FSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNK-LTLPIPSTCPQLFKTLMEA 356
+ +DVWS G+ L E+ E P+ +N ++ TL PS FK ++
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKK 276
Query: 357 CWEADSHMRPSFKTILK 373
C E + R + +L+
Sbjct: 277 CLEKNVDARWTTSQLLQ 293
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 27/263 (10%)
Query: 133 VYKGIYEKQEVAIKVAH-PNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLV 191
VY G +V I + P D + + +E L H+NIV +G ++ + +
Sbjct: 24 VYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIF 83
Query: 192 MEYARGGPLNRVLAGR----KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
ME GG L+ +L + K + + QI EG+ YLH ++HRD+K NVL
Sbjct: 84 MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVL 140
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAA--GTYAWMAPEVIKTS--IFSKASD 303
+ + LKI+DFG ++ + + GT +MAPE+I + KA+D
Sbjct: 141 I-------NTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAAD 193
Query: 304 VWSYGVVLWELLTGEIPYKSINX-XXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADS 362
+WS G + E+ TG+ P+ + K+ IP + K + C+E D
Sbjct: 194 IWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDP 253
Query: 363 HMRPSFKTILKALNNIVHSEFIQ 385
R N+++ EF++
Sbjct: 254 DKR-------ACANDLLVDEFLK 269
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 17/229 (7%)
Query: 132 KVYKGIYEKQEVAIKVAHPNP-DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCL 190
K+ + I +EVA+K+ + + L+ + +E +++ + +H NIV L V L L
Sbjct: 24 KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYL 83
Query: 191 VMEYARGGPLNRVLAGRKIRPDVLVDWAI-QIAEGMNYLHCQAPISLIHRDLKSSNVLLS 249
VMEYA GG + L + QI + Y H + ++HRDLK+ N+LL
Sbjct: 84 VMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLD 140
Query: 250 EPIENEDLQFKTLKITDFGLARE-VYKTTHMSAAGTYAWMAPEVIKTSIFSKAS-DVWSY 307
+ +KI DFG + E + + G+ + APE+ + + DVWS
Sbjct: 141 ADM--------NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSL 192
Query: 308 GVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP--IPSTCPQLFKTLM 354
GV+L+ L++G +P+ N K +P + + C L K +
Sbjct: 193 GVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL 241
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 25/203 (12%)
Query: 134 YKGIYEKQ------EVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIVSLIGVCLQS 185
+ G+Y + EVAIK+ +++ V+ E K+ H +I+ L S
Sbjct: 24 FAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDS 83
Query: 186 PKLCLVMEYARGGPLNRVLAGRKIRP---DVLVDWAIQIAEGMNYLHCQAPISLIHRDLK 242
+ LV+E G +NR L R ++P + + QI GM YLH ++HRDL
Sbjct: 84 NYVYLVLEMCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLT 139
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLAREVY--KTTHMSAAGTYAWMAPEVIKTSIFSK 300
SN+LL+ + +KI DFGLA ++ H + GT +++PE+ S
Sbjct: 140 LSNLLLTRNM--------NIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGL 191
Query: 301 ASDVWSYGVVLWELLTGEIPYKS 323
SDVWS G + + LL G P+ +
Sbjct: 192 ESDVWSLGCMFYTLLIGRPPFDT 214
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 83/172 (48%), Gaps = 12/172 (6%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPD 212
E I ENVK+E H NIV V L L +VMEYA GG L R+ + D
Sbjct: 56 EKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED 115
Query: 213 VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE 272
+ Q+ G++Y H + + HRDLK N LL + LKI FG ++
Sbjct: 116 EARFFFQQLISGVSYCHA---MQVCHRDLKLENTLL------DGSPAPRLKICAFGYSKS 166
Query: 273 -VYKTTHMSAAGTYAWMAPEVI-KTSIFSKASDVWSYGVVLWELLTGEIPYK 322
V + GT A++APEV+ K K +DVWS GV L+ +L G P++
Sbjct: 167 SVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 81/164 (49%), Gaps = 9/164 (5%)
Query: 159 NVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWA 218
+++ E +L H NIV+L + + LVM+ GG L + R + +
Sbjct: 52 SLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLV 111
Query: 219 IQ-IAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT 277
IQ + + YLH ++HRDLK N+L P EN + ITDFGL++
Sbjct: 112 IQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIM-----ITDFGLSKMEQNGI 163
Query: 278 HMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+A GT ++APEV+ +SKA D WS GV+ + LL G P+
Sbjct: 164 MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 122/258 (47%), Gaps = 31/258 (12%)
Query: 132 KVYKGIYEKQEV--AIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
KVYK ++ V A KV +E LE+ E +L DH NIV L+ L
Sbjct: 25 KVYKAQNKETSVLAAAKVIDTKSEEE-LEDYMVEIDILASCDHPNIVKLLDAFYYENNLW 83
Query: 190 LVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIA-----EGMNYLHCQAPISLIHRDLKSS 244
+++E+ GG ++ V+ + RP L + IQ+ + +NYLH +IHRDLK+
Sbjct: 84 ILIEFCAGGAVDAVMLELE-RP--LTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAG 137
Query: 245 NVLLSEPIENEDLQFKTLKITDFGLAREVYKTT---HMSAAGTYAWMAPEVI-----KTS 296
N+L + ++ + +K+ DFG++ + +T S GT WMAPEV+ K
Sbjct: 138 NILFT--LDGD------IKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDR 189
Query: 297 IFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNK-LTLPIPSTCPQLFKTLME 355
+ +DVWS G+ L E+ E P+ +N ++ TL PS FK ++
Sbjct: 190 PYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLK 249
Query: 356 ACWEADSHMRPSFKTILK 373
C E + R + +L+
Sbjct: 250 KCLEKNVDARWTTSQLLQ 267
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 156 ILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVL 214
I ENV++E H NIV V L L ++MEYA GG L R+ + D
Sbjct: 59 IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEA 118
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE-V 273
+ Q+ G++Y H + + HRDLK N LL + LKI DFG ++ V
Sbjct: 119 RFFFQQLLSGVSYCHS---MQICHRDLKLENTLL------DGSPAPRLKICDFGYSKSSV 169
Query: 274 YKTTHMSAAGTYAWMAPEVI-KTSIFSKASDVWSYGVVLWELLTGEIPYK 322
+ S GT A++APEV+ + K +DVWS GV L+ +L G P++
Sbjct: 170 LHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFE 219
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 15/171 (8%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-----NRVLAGRKIRPD 212
E++K+E + + H +IV L+ L +V E+ G L R AG
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEA 130
Query: 213 VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE 272
V + QI E + Y H ++IHRD+K NVLL+ EN +K+ DFG+A +
Sbjct: 131 VASHYMRQILEALRYCHDN---NIIHRDVKPENVLLASK-ENS----APVKLGDFGVAIQ 182
Query: 273 VYKTTHMSAA--GTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ ++ ++ GT +MAPEV+K + K DVW GV+L+ LL+G +P+
Sbjct: 183 LGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 102/201 (50%), Gaps = 24/201 (11%)
Query: 133 VYKGIYEK--QEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCL 190
VYK I+++ Q VAIK P E+ L+ + +E ++ D ++V G ++ L +
Sbjct: 45 VYKAIHKETGQIVAIKQV---PVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101
Query: 191 VMEYARGGPLNRV--LAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
VMEY G ++ + L + + D + +G+ YLH + IHRD+K+ N+LL
Sbjct: 102 VMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILL 158
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMS----AAGTYAWMAPEVIKTSIFSKASDV 304
+ K+ DFG+A ++ T M+ GT WMAPEVI+ ++ +D+
Sbjct: 159 NTE--------GHAKLADFGVAGQL--TDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADI 208
Query: 305 WSYGVVLWELLTGEIPYKSIN 325
WS G+ E+ G+ PY I+
Sbjct: 209 WSLGITAIEMAEGKPPYADIH 229
>pdb|2RF0|A Chain A, Crystal Structure Of Human Mixed Lineage Kinase Map3k10
Sh3 Domain
pdb|2RF0|B Chain B, Crystal Structure Of Human Mixed Lineage Kinase Map3k10
Sh3 Domain
pdb|2RF0|C Chain C, Crystal Structure Of Human Mixed Lineage Kinase Map3k10
Sh3 Domain
pdb|2RF0|D Chain D, Crystal Structure Of Human Mixed Lineage Kinase Map3k10
Sh3 Domain
Length = 89
Score = 79.3 bits (194), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/61 (54%), Positives = 49/61 (80%), Gaps = 3/61 (4%)
Query: 34 LWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFV 93
+W A++DY+A G +EL+LRRGD V+VLS+D A+SGD GWWTG++ +VG+FP+N+V
Sbjct: 31 VWTAVFDYEAAGDEELTLRRGDRVQVLSQDCAVSGDEGWWTGQLPSG---RVGVFPSNYV 87
Query: 94 S 94
+
Sbjct: 88 A 88
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 94/179 (52%), Gaps = 11/179 (6%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
+A K+ H I + +E ++L + IV G ++ + ME+ GG L++
Sbjct: 44 MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ 103
Query: 203 VLA-GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKT 261
VL ++I ++L +I + G+ YL + I +HRD+K SN+L++ E
Sbjct: 104 VLKEAKRIPEEILGKVSIAVLRGLAYLREKHQI--MHRDVKPSNILVNSRGE-------- 153
Query: 262 LKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIP 320
+K+ DFG++ ++ + S GT ++MAPE ++ + +S SD+WS G+ L EL G P
Sbjct: 154 IKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 24/244 (9%)
Query: 137 IYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYAR 196
I + VAIK+ N + L +K E + L H++I L V + K+ +V+EY
Sbjct: 32 ILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCP 91
Query: 197 GGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
GG L + +++ ++ + QI + Y+H Q HRDLK N+L E
Sbjct: 92 GGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDE----- 143
Query: 256 DLQFKTLKITDFGLAR--EVYKTTHM-SAAGTYAWMAPEVIK-TSIFSKASDVWSYGVVL 311
+ LK+ DFGL + K H+ + G+ A+ APE+I+ S +DVWS G++L
Sbjct: 144 ---YHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILL 200
Query: 312 WELLTGEIPYKSINXXXXXXXXXXNKLTLP---IPSTCPQLFKTLMEACWEADSHMRPSF 368
+ L+ G +P+ N K +P PS+ L++ + D R S
Sbjct: 201 YVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSI-----LLLQQMLQVDPKKRISM 255
Query: 369 KTIL 372
K +L
Sbjct: 256 KNLL 259
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 121/257 (47%), Gaps = 30/257 (11%)
Query: 132 KVYKGIYEKQEV--AIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
KVYK ++ V A KV +E LE+ E +L DH NIV L+ L
Sbjct: 52 KVYKAQNKETSVLAAAKVIDTKSEEE-LEDYMVEIDILASCDHPNIVKLLDAFYYENNLW 110
Query: 190 LVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIA-----EGMNYLHCQAPISLIHRDLKSS 244
+++E+ GG ++ V+ + RP L + IQ+ + +NYLH +IHRDLK+
Sbjct: 111 ILIEFCAGGAVDAVMLELE-RP--LTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAG 164
Query: 245 NVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM--SAAGTYAWMAPEVI-----KTSI 297
N+L + ++ + +K+ DFG++ + + S GT WMAPEV+ K
Sbjct: 165 NILFT--LDGD------IKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 298 FSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNK-LTLPIPSTCPQLFKTLMEA 356
+ +DVWS G+ L E+ E P+ +N ++ TL PS FK ++
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKK 276
Query: 357 CWEADSHMRPSFKTILK 373
C E + R + +L+
Sbjct: 277 CLEKNVDARWTTSQLLQ 293
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
++ VA+K+ + EN+K+E + + +H N+V G + L +EY GG
Sbjct: 31 EEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 200 LNRVLAGRKIRPDVLV------DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L +I PD+ + + Q+ G+ YLH I + HRD+K N+LL E
Sbjct: 91 L-----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDER-- 140
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHM-----SAAGTYAWMAPEVIKTSIF-SKASDVWSY 307
LKI+DFGLA V++ + GT ++APE++K F ++ DVWS
Sbjct: 141 ------DNLKISDFGLA-TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 308 GVVLWELLTGEIPY 321
G+VL +L GE+P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 101/224 (45%), Gaps = 34/224 (15%)
Query: 155 NILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDV 213
+++ +++E + L LF H +I+ L V + +VMEY GG L + + ++
Sbjct: 58 DVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKE 117
Query: 214 LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV 273
QI G++Y H ++HRDLK NVLL + KI DFGL+ +
Sbjct: 118 SRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHM--------NAKIADFGLSNMM 166
Query: 274 YKTTHM-SAAGTYAWMAPEVIKTSIFSKAS-DVWSYGVVLWELLTGEIPYKSINXXXXXX 331
+ + G+ + APEVI +++ D+WS GV+L+ LL G +P+
Sbjct: 167 SDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD-------- 218
Query: 332 XXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
P LFK + + + ++ PS ++LK +
Sbjct: 219 ------------DHVPTLFKKICDGIFYTPQYLNPSVISLLKHM 250
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
++ VA+K+ + EN+K+E + + +H N+V G + L +EY GG
Sbjct: 31 EEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 200 LNRVLAGRKIRPDVLV------DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L +I PD+ + + Q+ G+ YLH I + HRD+K N+LL E
Sbjct: 91 L-----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDER-- 140
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHM-----SAAGTYAWMAPEVIKTSIF-SKASDVWSY 307
LKI+DFGLA V++ + GT ++APE++K F ++ DVWS
Sbjct: 141 ------DNLKISDFGLA-TVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 308 GVVLWELLTGEIPY 321
G+VL +L GE+P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 141 QEVAIKVAHPN--PDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
QE A+KV + E++ +E +LL DH NI+ L LV E GG
Sbjct: 75 QECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGG 134
Query: 199 PLNRVLAGRKIRPDVLVDWAI-QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDL 257
L + RK +V I Q+ G+ Y+H ++HRDLK N+LL ++ ++
Sbjct: 135 ELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANI 191
Query: 258 QFKTLKITDFGLAREVYKTTHM-SAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
+I DFGL+ + M GT ++APEV+ + + + DVWS GV+L+ LL+
Sbjct: 192 -----RIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLS 245
Query: 317 GEIPYKSINXXXXXXXXXXNKLTLPIP 343
G P+ N K T +P
Sbjct: 246 GCPPFNGANEYDILKKVEKGKYTFELP 272
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 141 QEVAIKVAHPN--PDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
QE A+KV + E++ +E +LL DH NI+ L LV E GG
Sbjct: 76 QECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGG 135
Query: 199 PLNRVLAGRKIRPDVLVDWAI-QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDL 257
L + RK +V I Q+ G+ Y+H ++HRDLK N+LL ++ ++
Sbjct: 136 ELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANI 192
Query: 258 QFKTLKITDFGLAREVYKTTHM-SAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
+I DFGL+ + M GT ++APEV+ + + + DVWS GV+L+ LL+
Sbjct: 193 -----RIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLS 246
Query: 317 GEIPYKSINXXXXXXXXXXNKLTLPIP 343
G P+ N K T +P
Sbjct: 247 GCPPFNGANEYDILKKVEKGKYTFELP 273
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 141 QEVAIKVAHPN--PDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
QE A+KV + E++ +E +LL DH NI+ L LV E GG
Sbjct: 52 QECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGG 111
Query: 199 PLNRVLAGRKIRPDVLVDWAI-QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDL 257
L + RK +V I Q+ G+ Y+H ++HRDLK N+LL ++ ++
Sbjct: 112 ELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANI 168
Query: 258 QFKTLKITDFGLAREVYKTTHM-SAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
+I DFGL+ + M GT ++APEV+ + + + DVWS GV+L+ LL+
Sbjct: 169 -----RIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLS 222
Query: 317 GEIPYKSINXXXXXXXXXXNKLTLPIP 343
G P+ N K T +P
Sbjct: 223 GCPPFNGANEYDILKKVEKGKYTFELP 249
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 141 QEVAIKVAHPN--PDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
QE A+KV + E++ +E +LL DH NI+ L LV E GG
Sbjct: 58 QECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGG 117
Query: 199 PLNRVLAGRKIRPDVLVDWAI-QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDL 257
L + RK +V I Q+ G+ Y+H ++HRDLK N+LL ++ ++
Sbjct: 118 ELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANI 174
Query: 258 QFKTLKITDFGLAREVYKTTHMS-AAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
+I DFGL+ + M GT ++APEV+ + + + DVWS GV+L+ LL+
Sbjct: 175 -----RIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLS 228
Query: 317 GEIPYKSINXXXXXXXXXXNKLTLPIP 343
G P+ N K T +P
Sbjct: 229 GCPPFNGANEYDILKKVEKGKYTFELP 255
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 96/183 (52%), Gaps = 13/183 (7%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
+A K+ H I + +E ++L + IV G ++ + ME+ GG L++
Sbjct: 53 MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ 112
Query: 203 VL--AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
VL AGR I +L +I + +G+ YL + I +HRD+K SN+L++ E
Sbjct: 113 VLKKAGR-IPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGE------- 162
Query: 261 TLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIP 320
+K+ DFG++ ++ + S GT ++M+PE ++ + +S SD+WS G+ L E+ G P
Sbjct: 163 -IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
Query: 321 YKS 323
S
Sbjct: 222 IGS 224
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
++ VA+K+ + EN+K+E + + +H N+V G + L +EY GG
Sbjct: 32 EEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 200 LNRVLAGRKIRPDVLV------DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L +I PD+ + + Q+ G+ YLH I + HRD+K N+LL E
Sbjct: 92 L-----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDER-- 141
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHM-----SAAGTYAWMAPEVIKTSIF-SKASDVWSY 307
LKI+DFGLA V++ + GT ++APE++K F ++ DVWS
Sbjct: 142 ------DNLKISDFGLA-TVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 308 GVVLWELLTGEIPY 321
G+VL +L GE+P+
Sbjct: 195 GIVLTAMLAGELPW 208
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
++ VA+K+ + EN+K+E + + +H N+V G + L +EY GG
Sbjct: 32 EEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 200 LNRVLAGRKIRPDVLV------DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L +I PD+ + + Q+ G+ YLH I + HRD+K N+LL E
Sbjct: 92 L-----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDER-- 141
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHM-----SAAGTYAWMAPEVIKTSIF-SKASDVWSY 307
LKI+DFGLA V++ + GT ++APE++K F ++ DVWS
Sbjct: 142 ------DNLKISDFGLA-TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 308 GVVLWELLTGEIPY 321
G+VL +L GE+P+
Sbjct: 195 GIVLTAMLAGELPW 208
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
++ VA+K+ + EN+K+E + + +H N+V G + L +EY GG
Sbjct: 31 EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 200 LNRVLAGRKIRPDVLV------DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L +I PD+ + + Q+ G+ YLH I + HRD+K N+LL E
Sbjct: 91 LF-----DRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDE--- 139
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHM-----SAAGTYAWMAPEVIKTSIF-SKASDVWSY 307
LKI+DFGLA V++ + GT ++APE++K F ++ DVWS
Sbjct: 140 -----RDNLKISDFGLA-TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 308 GVVLWELLTGEIPY 321
G+VL +L GE+P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
++ VA+K+ + EN+K+E + + +H N+V G + L +EY GG
Sbjct: 31 EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 200 LNRVLAGRKIRPDVLV------DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L +I PD+ + + Q+ G+ YLH I + HRD+K N+LL E
Sbjct: 91 L-----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDER-- 140
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHM-----SAAGTYAWMAPEVIKTSIF-SKASDVWSY 307
LKI+DFGLA V++ + GT ++APE++K F ++ DVWS
Sbjct: 141 ------DNLKISDFGLA-TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 308 GVVLWELLTGEIPY 321
G+VL +L GE+P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
++ VA+K+ + EN+K+E + + +H N+V G + L +EY GG
Sbjct: 31 EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 200 LNRVLAGRKIRPDVLV------DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L +I PD+ + + Q+ G+ YLH I + HRD+K N+LL E
Sbjct: 91 L-----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDE--- 139
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHM-----SAAGTYAWMAPEVIKTSIF-SKASDVWSY 307
LKI+DFGLA V++ + GT ++APE++K F ++ DVWS
Sbjct: 140 -----RDNLKISDFGLA-TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 308 GVVLWELLTGEIPY 321
G+VL +L GE+P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
++ VA+K+ + EN+K+E + + +H N+V G + L +EY GG
Sbjct: 30 EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 89
Query: 200 LNRVLAGRKIRPDVLV------DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L +I PD+ + + Q+ G+ YLH I + HRD+K N+LL E
Sbjct: 90 L-----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDER-- 139
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHM-----SAAGTYAWMAPEVIKTSIF-SKASDVWSY 307
LKI+DFGLA V++ + GT ++APE++K F ++ DVWS
Sbjct: 140 ------DNLKISDFGLA-TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 192
Query: 308 GVVLWELLTGEIPY 321
G+VL +L GE+P+
Sbjct: 193 GIVLTAMLAGELPW 206
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
++ VA+K+ + EN+K+E + + +H N+V G + L +EY GG
Sbjct: 31 EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 200 LNRVLAGRKIRPDVLV------DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L +I PD+ + + Q+ G+ YLH I + HRD+K N+LL E
Sbjct: 91 L-----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDER-- 140
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHMS-----AAGTYAWMAPEVIKTSIF-SKASDVWSY 307
LKI+DFGLA V++ + GT ++APE++K F ++ DVWS
Sbjct: 141 ------DNLKISDFGLA-TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 308 GVVLWELLTGEIPY 321
G+VL +L GE+P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
++ VA+K+ + EN+K+E + + +H N+V G + L +EY GG
Sbjct: 32 EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 200 LNRVLAGRKIRPDVLV------DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L +I PD+ + + Q+ G+ YLH I + HRD+K N+LL E
Sbjct: 92 L-----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDER-- 141
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHMS-----AAGTYAWMAPEVIKTSIF-SKASDVWSY 307
LKI+DFGLA V++ + GT ++APE++K F ++ DVWS
Sbjct: 142 ------DNLKISDFGLA-TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 308 GVVLWELLTGEIPY 321
G+VL +L GE+P+
Sbjct: 195 GIVLTAMLAGELPW 208
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 15/216 (6%)
Query: 166 LLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQ-IAEG 224
LL H NI++L V + LV E RGG L + +K + + + I +
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKT 133
Query: 225 MNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTH--MSAA 282
+ YLH Q ++HRDLK SN+L + N + L+I DFG A+++ M+
Sbjct: 134 VEYLHSQG---VVHRDLKPSNILYVDESGNPE----CLRICDFGFAKQLRAENGLLMTPC 186
Query: 283 GTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYK---SINXXXXXXXXXXNKLT 339
T ++APEV+K + + D+WS G++L+ +L G P+ S K T
Sbjct: 187 YTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFT 246
Query: 340 LPIP--STCPQLFKTLMEACWEADSHMRPSFKTILK 373
L +T + K L+ D H R + K +L+
Sbjct: 247 LSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQ 282
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
++ VA+K+ + EN+K+E + + +H N+V G + L +EY GG
Sbjct: 32 EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 200 LNRVLAGRKIRPDVLV------DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L +I PD+ + + Q+ G+ YLH I + HRD+K N+LL E
Sbjct: 92 LF-----DRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDE--- 140
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHM-----SAAGTYAWMAPEVIKTSIF-SKASDVWSY 307
LKI+DFGLA V++ + GT ++APE++K F ++ DVWS
Sbjct: 141 -----RDNLKISDFGLA-TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 308 GVVLWELLTGEIPY 321
G+VL +L GE+P+
Sbjct: 195 GIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
++ VA+K+ + EN+K+E + + +H N+V G + L +EY GG
Sbjct: 32 EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 200 LNRVLAGRKIRPDVLV------DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L +I PD+ + + Q+ G+ YLH I + HRD+K N+LL E
Sbjct: 92 LF-----DRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDE--- 140
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHM-----SAAGTYAWMAPEVIKTSIF-SKASDVWSY 307
LKI+DFGLA V++ + GT ++APE++K F ++ DVWS
Sbjct: 141 -----RDNLKISDFGLA-TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 308 GVVLWELLTGEIPY 321
G+VL +L GE+P+
Sbjct: 195 GIVLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
++ VA+K+ + EN+K+E + + +H N+V G + L +EY GG
Sbjct: 32 EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 200 LNRVLAGRKIRPDVLV------DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L +I PD+ + + Q+ G+ YLH I + HRD+K N+LL E
Sbjct: 92 LF-----DRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDE--- 140
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHM-----SAAGTYAWMAPEVIKTSIF-SKASDVWSY 307
LKI+DFGLA V++ + GT ++APE++K F ++ DVWS
Sbjct: 141 -----RDNLKISDFGLA-TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 308 GVVLWELLTGEIPY 321
G+VL +L GE+P+
Sbjct: 195 GIVLTAMLAGELPW 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
++ VA+K+ + EN+K+E + + +H N+V G + L +EY GG
Sbjct: 31 EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 200 LNRVLAGRKIRPDVLV------DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L +I PD+ + + Q+ G+ YLH I + HRD+K N+LL E
Sbjct: 91 L-----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDER-- 140
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHMS-----AAGTYAWMAPEVIKTSIF-SKASDVWSY 307
LKI+DFGLA V++ + GT ++APE++K F ++ DVWS
Sbjct: 141 ------DNLKISDFGLA-TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 308 GVVLWELLTGEIPY 321
G+VL +L GE+P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
++ VA+K+ + EN+K+E + + +H N+V G + L +EY GG
Sbjct: 32 EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 200 LNRVLAGRKIRPDVLV------DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L +I PD+ + + Q+ G+ YLH I + HRD+K N+LL E
Sbjct: 92 LF-----DRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDE--- 140
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHM-----SAAGTYAWMAPEVIKTSIF-SKASDVWSY 307
LKI+DFGLA V++ + GT ++APE++K F ++ DVWS
Sbjct: 141 -----RDNLKISDFGLA-TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 308 GVVLWELLTGEIPY 321
G+VL +L GE+P+
Sbjct: 195 GIVLTAMLAGELPW 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
++ VA+K+ + EN+K+E + + +H N+V G + L +EY GG
Sbjct: 32 EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 200 LNRVLAGRKIRPDVLV------DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L +I PD+ + + Q+ G+ YLH I + HRD+K N+LL E
Sbjct: 92 L-----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDER-- 141
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHM-----SAAGTYAWMAPEVIKTSIF-SKASDVWSY 307
LKI+DFGLA V++ + GT ++APE++K F ++ DVWS
Sbjct: 142 ------DNLKISDFGLA-TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194
Query: 308 GVVLWELLTGEIPY 321
G+VL +L GE+P+
Sbjct: 195 GIVLTAMLAGELPW 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
++ VA+K+ + EN+K+E + + +H N+V G + L +EY GG
Sbjct: 31 EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 200 LNRVLAGRKIRPDVLV------DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L +I PD+ + + Q+ G+ YLH I + HRD+K N+LL E
Sbjct: 91 L-----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDER-- 140
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHM-----SAAGTYAWMAPEVIKTSIF-SKASDVWSY 307
LKI+DFGLA V++ + GT ++APE++K F ++ DVWS
Sbjct: 141 ------DNLKISDFGLA-TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 308 GVVLWELLTGEIPY 321
G+VL +L GE+P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 15/216 (6%)
Query: 166 LLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQ-IAEG 224
LL H NI++L V + LV E RGG L + +K + + + I +
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKT 133
Query: 225 MNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTH--MSAA 282
+ YLH Q ++HRDLK SN+L + N + L+I DFG A+++ M+
Sbjct: 134 VEYLHSQG---VVHRDLKPSNILYVDESGNPE----CLRICDFGFAKQLRAENGLLMTPC 186
Query: 283 GTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYK---SINXXXXXXXXXXNKLT 339
T ++APEV+K + + D+WS G++L+ +L G P+ S K T
Sbjct: 187 YTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFT 246
Query: 340 LPIP--STCPQLFKTLMEACWEADSHMRPSFKTILK 373
L +T + K L+ D H R + K +L+
Sbjct: 247 LSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQ 282
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
++ VA+K+ + EN+K+E + + +H N+V G + L +EY GG
Sbjct: 31 EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 200 LNRVLAGRKIRPDVLV------DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L +I PD+ + + Q+ G+ YLH I + HRD+K N+LL E
Sbjct: 91 L-----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDER-- 140
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHM-----SAAGTYAWMAPEVIKTSIF-SKASDVWSY 307
LKI+DFGLA V++ + GT ++APE++K F ++ DVWS
Sbjct: 141 ------DNLKISDFGLA-TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 308 GVVLWELLTGEIPY 321
G+VL +L GE+P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 87/173 (50%), Gaps = 15/173 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSP-KLCLVMEYARGGPLN-RVLAGRKIRPDVL 214
+E E ++L L + ++ + C Q+P +L VME+ GG L + R+
Sbjct: 67 VECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARA 126
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE-- 272
+A +I + +LH + +I+RDLK NVLL K+ DFG+ +E
Sbjct: 127 RFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHE--------GHCKLADFGMCKEGI 175
Query: 273 VYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSIN 325
T + GT ++APE+++ ++ A D W+ GV+L+E+L G P+++ N
Sbjct: 176 CNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN 228
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 95/180 (52%), Gaps = 13/180 (7%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
+A K+ H I + +E ++L + IV G ++ + ME+ GG L++
Sbjct: 61 MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ 120
Query: 203 VL--AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
VL AGR I +L +I + +G+ YL + I +HRD+K SN+L++ E
Sbjct: 121 VLKKAGR-IPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGE------- 170
Query: 261 TLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIP 320
+K+ DFG++ ++ + S GT ++M+PE ++ + +S SD+WS G+ L E+ G P
Sbjct: 171 -IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
++ VA+K+ + EN+K+E + + +H N+V G + L +EY GG
Sbjct: 31 EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 200 LNRVLAGRKIRPDVLV------DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L +I PD+ + + Q+ G+ YLH I + HRD+K N+LL E
Sbjct: 91 L-----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDER-- 140
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHM-----SAAGTYAWMAPEVIKTSIF-SKASDVWSY 307
LKI+DFGLA V++ + GT ++APE++K F ++ DVWS
Sbjct: 141 ------DNLKISDFGLA-TVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 308 GVVLWELLTGEIPY 321
G+VL +L GE+P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
++ VA+K+ + EN+K+E + + +H N+V G + L +EY GG
Sbjct: 31 EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 200 LNRVLAGRKIRPDVLV------DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L +I PD+ + + Q+ G+ YLH I + HRD+K N+LL E
Sbjct: 91 L-----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDER-- 140
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHM-----SAAGTYAWMAPEVIKTSIF-SKASDVWSY 307
LKI+DFGLA V++ + GT ++APE++K F ++ DVWS
Sbjct: 141 ------DNLKISDFGLA-TVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 308 GVVLWELLTGEIPY 321
G+VL +L GE+P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
++ VA+K+ + EN+K+E + + +H N+V G + L +EY GG
Sbjct: 31 EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 200 LNRVLAGRKIRPDVLV------DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
L +I PD+ + + Q+ G+ YLH I + HRD+K N+LL E
Sbjct: 91 L-----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDER-- 140
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHM-----SAAGTYAWMAPEVIKTSIF-SKASDVWSY 307
LKI+DFGLA V++ + GT ++APE++K F ++ DVWS
Sbjct: 141 ------DNLKISDFGLA-TVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSC 193
Query: 308 GVVLWELLTGEIPY 321
G+VL +L GE+P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 141 QEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+E AIK+ EN + V +E ++ DH V L KL + YA+ G
Sbjct: 58 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 117
Query: 199 PLNRVLAGRKIRP---DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L + + RKI + +I + YLH + +IHRDLK N+LL NE
Sbjct: 118 CLLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILL-----NE 167
Query: 256 DLQFKTLKITDFGLAR----EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVL 311
D+ ++ITDFG A+ E + S GT +++PE++ SK+SD+W+ G ++
Sbjct: 168 DMH---IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCII 224
Query: 312 WELLTGEIPYKSIN 325
++L+ G P+++ N
Sbjct: 225 YQLVAGLPPFRAGN 238
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 95/180 (52%), Gaps = 13/180 (7%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
+A K+ H I + +E ++L + IV G ++ + ME+ GG L++
Sbjct: 96 MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ 155
Query: 203 VL--AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
VL AGR I +L +I + +G+ YL + I +HRD+K SN+L++ E
Sbjct: 156 VLKKAGR-IPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGE------- 205
Query: 261 TLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIP 320
+K+ DFG++ ++ + S GT ++M+PE ++ + +S SD+WS G+ L E+ G P
Sbjct: 206 -IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 101/219 (46%), Gaps = 19/219 (8%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAI- 219
+E +L L DH NI+ L LVME +GG L + ++ K VD A+
Sbjct: 85 EEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNE---VDAAVI 141
Query: 220 --QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT 277
Q+ G+ YLH +++HRDLK N+LL E E + L +KI DFGL+
Sbjct: 142 IKQVLSGVTYLHKH---NIVHRDLKPENLLL-ESKEKDAL----IKIVDFGLSAVFENQK 193
Query: 278 HMSAA-GTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXN 336
M GT ++APEV++ + + DVWS GV+L+ LL G P+
Sbjct: 194 KMKERLGTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKG 252
Query: 337 KLTLPIPS--TCPQLFKTLMEACWEADSHMRPSFKTILK 373
K T P + K L++ + DS R S + L+
Sbjct: 253 KYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 120/257 (46%), Gaps = 30/257 (11%)
Query: 132 KVYKGIYEKQEV--AIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC 189
KVYK ++ V A KV +E LE+ E +L DH NIV L+ L
Sbjct: 52 KVYKAQNKETSVLAAAKVIDTKSEEE-LEDYMVEIDILASCDHPNIVKLLDAFYYENNLW 110
Query: 190 LVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIA-----EGMNYLHCQAPISLIHRDLKSS 244
+++E+ GG ++ V+ + RP L + IQ+ + +NYLH +IHRDLK+
Sbjct: 111 ILIEFCAGGAVDAVMLELE-RP--LTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAG 164
Query: 245 NVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAA--GTYAWMAPEVI-----KTSI 297
N+L + ++ + +K+ DFG++ + + GT WMAPEV+ K
Sbjct: 165 NILFT--LDGD------IKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRP 216
Query: 298 FSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNK-LTLPIPSTCPQLFKTLMEA 356
+ +DVWS G+ L E+ E P+ +N ++ TL PS FK ++
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKK 276
Query: 357 CWEADSHMRPSFKTILK 373
C E + R + +L+
Sbjct: 277 CLEKNVDARWTTSQLLQ 293
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 86/174 (49%), Gaps = 11/174 (6%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPD 212
E E + E LL DH NI+ L V LV E+ GG L +++ K
Sbjct: 87 EKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDEC 146
Query: 213 VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE 272
+ QI G+ YLH +++HRD+K N+LL EN++ +KI DFGL+
Sbjct: 147 DAANIMKQILSGICYLHKH---NIVHRDIKPENILL----ENKN-SLLNIKIVDFGLSSF 198
Query: 273 VYKTTHM-SAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSIN 325
K + GT ++APEV+K +++ DVWS GV+++ LL G P+ N
Sbjct: 199 FSKDYKLRDRLGTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPPFGGQN 251
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 87/172 (50%), Gaps = 14/172 (8%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVL--AGRKIRPDVL 214
E VK E ++ DH N++ L + LVMEY GG L +R++ + D +
Sbjct: 131 EEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTI 190
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+ + QI EG+ ++H + ++H DLK N+L N D K +KI DFGLAR
Sbjct: 191 L-FMKQICEGIRHMH---QMYILHLDLKPENILCV----NRDA--KQIKIIDFGLARRYK 240
Query: 275 KTTHMSAA-GTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSIN 325
+ GT ++APEV+ S +D+WS GV+ + LL+G P+ N
Sbjct: 241 PREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN 292
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 95/180 (52%), Gaps = 13/180 (7%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
+A K+ H I + +E ++L + IV G ++ + ME+ GG L++
Sbjct: 34 MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ 93
Query: 203 VL--AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
VL AGR I +L +I + +G+ YL + I +HRD+K SN+L++ E
Sbjct: 94 VLKKAGR-IPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGE------- 143
Query: 261 TLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIP 320
+K+ DFG++ ++ + S GT ++M+PE ++ + +S SD+WS G+ L E+ G P
Sbjct: 144 -IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 95/180 (52%), Gaps = 13/180 (7%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
+A K+ H I + +E ++L + IV G ++ + ME+ GG L++
Sbjct: 34 MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ 93
Query: 203 VL--AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
VL AGR I +L +I + +G+ YL + I +HRD+K SN+L++ E
Sbjct: 94 VLKKAGR-IPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGE------- 143
Query: 261 TLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIP 320
+K+ DFG++ ++ + S GT ++M+PE ++ + +S SD+WS G+ L E+ G P
Sbjct: 144 -IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 95/180 (52%), Gaps = 13/180 (7%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
+A K+ H I + +E ++L + IV G ++ + ME+ GG L++
Sbjct: 34 MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ 93
Query: 203 VL--AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
VL AGR I +L +I + +G+ YL + I +HRD+K SN+L++ E
Sbjct: 94 VLKKAGR-IPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGE------- 143
Query: 261 TLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIP 320
+K+ DFG++ ++ + S GT ++M+PE ++ + +S SD+WS G+ L E+ G P
Sbjct: 144 -IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 95/180 (52%), Gaps = 13/180 (7%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
+A K+ H I + +E ++L + IV G ++ + ME+ GG L++
Sbjct: 34 MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ 93
Query: 203 VL--AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
VL AGR I +L +I + +G+ YL + I +HRD+K SN+L++ E
Sbjct: 94 VLKKAGR-IPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGE------- 143
Query: 261 TLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIP 320
+K+ DFG++ ++ + S GT ++M+PE ++ + +S SD+WS G+ L E+ G P
Sbjct: 144 -IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 95/180 (52%), Gaps = 13/180 (7%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
+A K+ H I + +E ++L + IV G ++ + ME+ GG L++
Sbjct: 34 MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ 93
Query: 203 VL--AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
VL AGR I +L +I + +G+ YL + I +HRD+K SN+L++ E
Sbjct: 94 VLKKAGR-IPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGE------- 143
Query: 261 TLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIP 320
+K+ DFG++ ++ + S GT ++M+PE ++ + +S SD+WS G+ L E+ G P
Sbjct: 144 -IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 11/167 (6%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDW 217
+ +++E ++ L H NIV L + LV + GG L + R+ +
Sbjct: 48 QKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH 107
Query: 218 AIQ-IAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY-- 274
IQ I E + LHC + ++HRDLK N+LL+ + +K+ DFGLA EV
Sbjct: 108 CIQQILEAV--LHCH-QMGVVHRDLKPENLLLASKCKG-----AAVKLADFGLAIEVQGD 159
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ AGT +++PEV++ + K D+W+ GV+L+ LL G P+
Sbjct: 160 QQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVD 216
E +++E +L H N+++L V + L++E GG L LA ++ + +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
+ QI +G+NYLH + + H DLK N++L ++++ +K+ DFGLA E+
Sbjct: 120 FIKQILDGVNYLHTK---KIAHFDLKPENIMLL----DKNIPIPHIKLIDFGLAHEIEDG 172
Query: 277 THM-SAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ GT ++APE++ +D+WS GV+ + LL+G P+
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 21/274 (7%)
Query: 114 IDYNKLXXXXXXXXXXXXKVYKGIYEKQEVAIKVAHPNP-DENILENVKQEGKLLWLFDH 172
ID+ +L +++KG ++ ++ +KV + +E L +F H
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 173 RNIVSLIGVCLQ--SPKLCLVMEYARGGPLNRVL-AGRKIRPDV--LVDWAIQIAEGMNY 227
N++ ++G C +P L+ + G L VL G D V +A+ +A GM +
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAF 126
Query: 228 LHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAW 287
LH P+ H L S +V++ +ED+ T +I+ + M A AW
Sbjct: 127 LHTLEPLIPRHA-LNSRSVMI-----DEDM---TARISMADVKFSFQSPGRMYAP---AW 174
Query: 288 MAPEVIKT---SIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPS 344
+APE ++ +++D+WS+ V+LWEL+T E+P+ ++ L IP
Sbjct: 175 VAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPP 234
Query: 345 TCPQLFKTLMEACWEADSHMRPSFKTILKALNNI 378
LM+ C D RP F I+ L +
Sbjct: 235 GISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 11/167 (6%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDW 217
+ +++E ++ L H NIV L + LV + GG L + R+ +
Sbjct: 75 QKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH 134
Query: 218 AI-QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY-- 274
I QI E +N++H ++HRDLK N+LL+ + +K+ DFGLA EV
Sbjct: 135 CIHQILESVNHIHQH---DIVHRDLKPENLLLASKCKG-----AAVKLADFGLAIEVQGE 186
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ AGT +++PEV++ + K D+W+ GV+L+ LL G P+
Sbjct: 187 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 22/194 (11%)
Query: 141 QEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+E AIK+ EN + V +E ++ DH V L KL + YA+ G
Sbjct: 59 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 118
Query: 199 PLNRVLAGRKIRP---DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L + + RKI + +I + YLH + +IHRDLK N+LL NE
Sbjct: 119 ELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILL-----NE 168
Query: 256 DLQFKTLKITDFGLAR----EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVL 311
D+ ++ITDFG A+ E + S GT +++PE++ K+SD+W+ G ++
Sbjct: 169 DMH---IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCII 225
Query: 312 WELLTGEIPYKSIN 325
++L+ G P+++ N
Sbjct: 226 YQLVAGLPPFRAGN 239
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 141 QEVAIKVAHPN--PDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
QE A+KV + E++ +E +LL DH NI L LV E GG
Sbjct: 52 QECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGG 111
Query: 199 PLNRVLAGRKIRPDVLVDWAI-QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDL 257
L + RK +V I Q+ G+ Y H ++HRDLK N+LL ++ ++
Sbjct: 112 ELFDEIISRKRFSEVDAARIIRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANI 168
Query: 258 QFKTLKITDFGLAREVYKTTHMSAA-------GTYAWMAPEVIKTSIFSKASDVWSYGVV 310
+I DFGL +TH A+ GT ++APEV+ + + + DVWS GV+
Sbjct: 169 -----RIIDFGL------STHFEASKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVI 216
Query: 311 LWELLTGEIPYKSINXXXXXXXXXXNKLTLPIP 343
L+ LL+G P+ N K T +P
Sbjct: 217 LYILLSGCPPFNGANEYDILKKVEKGKYTFELP 249
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 87/180 (48%), Gaps = 13/180 (7%)
Query: 144 AIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NR 202
A+KV D+ I V+ E +L H NI+ L + ++ LV+E GG L +R
Sbjct: 82 ALKVLKKTVDKKI---VRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDR 138
Query: 203 VLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTL 262
++ D QI E + YLH ++HRDLK N+L + P + L
Sbjct: 139 IVEKGYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPD-----APL 190
Query: 263 KITDFGLAREVYKTTHM-SAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
KI DFGL++ V M + GT + APE+++ + D+WS G++ + LL G P+
Sbjct: 191 KIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPF 250
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 120/267 (44%), Gaps = 24/267 (8%)
Query: 132 KVYKGI---------YEKQEVAIKV---AHPNPDENILENVKQEGKLLWLFDHRNIVSLI 179
K++KG+ + EV +KV AH N E+ E KL H+++V
Sbjct: 23 KIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL----SHKHLVLNY 78
Query: 180 GVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNY-LHCQAPISLIH 238
GVC + LV E+ + G L+ L K ++L W +++A+ + + +H +LIH
Sbjct: 79 GVCFCGDENILVQEFVKFGSLDTYLKKNKNCINIL--WKLEVAKQLAWAMHFLEENTLIH 136
Query: 239 RDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKT-SI 297
++ + N+LL + + +K++D G++ V + W+ PE I+
Sbjct: 137 GNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQE--RIPWVPPECIENPKN 194
Query: 298 FSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEAC 357
+ A+D WS+G LWE+ +G S ++ LP P L+ C
Sbjct: 195 LNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPKAAE--LANLINNC 252
Query: 358 WEADSHMRPSFKTILKALNNIVHSEFI 384
+ + RPSF+ I++ LN++ + +
Sbjct: 253 MDYEPDHRPSFRAIIRDLNSLFTPDLV 279
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVD 216
E +++E +L H N+++L V + L++E GG L LA ++ + +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
+ QI +G+NYLH + + H DLK N++L ++++ +K+ DFGLA E+
Sbjct: 120 FIKQILDGVNYLHTK---KIAHFDLKPENIMLL----DKNIPIPHIKLIDFGLAHEIEDG 172
Query: 277 THM-SAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ GT ++APE++ +D+WS GV+ + LL+G P+
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVD 216
E +++E +L H N+++L V + L++E GG L LA ++ + +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
+ QI +G+NYLH + + H DLK N++L ++++ +K+ DFGLA E+
Sbjct: 120 FIKQILDGVNYLHTK---KIAHFDLKPENIMLL----DKNIPIPHIKLIDFGLAHEIEDG 172
Query: 277 THM-SAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ GT ++APE++ +D+WS GV+ + LL+G P+
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 141 QEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+E AIK+ EN + V +E ++ DH V L KL + YA+ G
Sbjct: 36 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 95
Query: 199 PLNRVLAGRKIRP---DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L + + RKI + +I + YLH + +IHRDLK N+LL NE
Sbjct: 96 ELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILL-----NE 145
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAA----GTYAWMAPEVIKTSIFSKASDVWSYGVVL 311
D+ ++ITDFG A+ + + + A GT +++PE++ K+SD+W+ G ++
Sbjct: 146 DMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 202
Query: 312 WELLTGEIPYKSIN 325
++L+ G P+++ N
Sbjct: 203 YQLVAGLPPFRAGN 216
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 141 QEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+E AIK+ EN + V +E ++ DH V L KL + YA+ G
Sbjct: 35 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 94
Query: 199 PLNRVLAGRKIRP---DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L + + RKI + +I + YLH + +IHRDLK N+LL NE
Sbjct: 95 ELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILL-----NE 144
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAA----GTYAWMAPEVIKTSIFSKASDVWSYGVVL 311
D+ ++ITDFG A+ + + + A GT +++PE++ K+SD+W+ G ++
Sbjct: 145 DMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 201
Query: 312 WELLTGEIPYKSIN 325
++L+ G P+++ N
Sbjct: 202 YQLVAGLPPFRAGN 215
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 22/194 (11%)
Query: 141 QEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+E AIK+ EN + V +E ++ DH V L KL + YA+ G
Sbjct: 55 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 114
Query: 199 PLNRVLAGRKIRP---DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L + + RKI + +I + YLH + +IHRDLK N+LL NE
Sbjct: 115 ELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILL-----NE 164
Query: 256 DLQFKTLKITDFGLAR----EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVL 311
D+ ++ITDFG A+ E + S GT +++PE++ K+SD+W+ G ++
Sbjct: 165 DMH---IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCII 221
Query: 312 WELLTGEIPYKSIN 325
++L+ G P+++ N
Sbjct: 222 YQLVAGLPPFRAGN 235
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 77/147 (52%), Gaps = 17/147 (11%)
Query: 182 CLQS-PKLCLVMEYARGGPLNRVL--AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIH 238
C Q+ +L VMEY GG L + GR P + +A +IA G+ +L + +I+
Sbjct: 89 CFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF-YAAEIAIGLFFLQSKG---IIY 144
Query: 239 RDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY--KTTHMSAAGTYAWMAPEVIKTS 296
RDLK NV+L +KI DFG+ +E T GT ++APE+I
Sbjct: 145 RDLKLDNVMLDSE--------GHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQ 196
Query: 297 IFSKASDVWSYGVVLWELLTGEIPYKS 323
+ K+ D W++GV+L+E+L G+ P++
Sbjct: 197 PYGKSVDWWAFGVLLYEMLAGQAPFEG 223
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 17/220 (7%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDW 217
+++ +E + L H N + G L+ LVMEY G + + +K +V +
Sbjct: 60 QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA 119
Query: 218 AIQIA-EGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
A +G+ YLH ++IHRD+K+ N+LLSEP +K+ DFG A +
Sbjct: 120 VTHGALQGLAYLHSH---NMIHRDVKAGNILLSEP--------GLVKLGDFGSASIMAPA 168
Query: 277 THMSAAGTYAWMAPEVI---KTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXX 333
GT WMAPEVI + DVWS G+ EL + P ++N
Sbjct: 169 NXF--VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 226
Query: 334 XXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILK 373
N+ + F+ +++C + RP+ + +LK
Sbjct: 227 AQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 266
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVD 216
E +++E +L H N+++L V + L++E GG L LA ++ + +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
+ QI +G+NYLH + + H DLK N++L ++++ +K+ DFGLA E+
Sbjct: 120 FIKQILDGVNYLHTK---KIAHFDLKPENIMLL----DKNIPIPHIKLIDFGLAHEIEDG 172
Query: 277 THM-SAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ GT ++APE++ +D+WS GV+ + LL+G P+
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 141 QEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+E AIK+ EN + V +E ++ DH V L KL + YA+ G
Sbjct: 56 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 115
Query: 199 PLNRVLAGRKIRP---DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L + + RKI + +I + YLH + +IHRDLK N+LL NE
Sbjct: 116 ELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILL-----NE 165
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAA----GTYAWMAPEVIKTSIFSKASDVWSYGVVL 311
D+ ++ITDFG A+ + + + A GT +++PE++ K+SD+W+ G ++
Sbjct: 166 DMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 222
Query: 312 WELLTGEIPYKSIN 325
++L+ G P+++ N
Sbjct: 223 YQLVAGLPPFRAGN 236
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 10/167 (5%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+ +++E ++ H NIV L + LV + GG L + R+ +
Sbjct: 72 FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS 131
Query: 217 WAIQ-IAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK 275
IQ I E + Y H ++HR+LK N+LL+ + +K+ DFGLA EV
Sbjct: 132 HCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKG-----AAVKLADFGLAIEVND 183
Query: 276 TTHMSA-AGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ AGT +++PEV+K +SK D+W+ GV+L+ LL G P+
Sbjct: 184 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 141 QEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+E AIK+ EN + V +E ++ DH V L KL + YA+ G
Sbjct: 34 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 93
Query: 199 PLNRVLAGRKIRP---DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L + + RKI + +I + YLH + +IHRDLK N+LL NE
Sbjct: 94 ELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILL-----NE 143
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAA----GTYAWMAPEVIKTSIFSKASDVWSYGVVL 311
D+ ++ITDFG A+ + + + A GT +++PE++ K+SD+W+ G ++
Sbjct: 144 DMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 200
Query: 312 WELLTGEIPYKSIN 325
++L+ G P+++ N
Sbjct: 201 YQLVAGLPPFRAGN 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVD 216
E +++E +L H N+++L V + L++E GG L LA ++ + +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
+ QI +G+NYLH + + H DLK N++L ++++ +K+ DFGLA E+
Sbjct: 120 FIKQILDGVNYLHTK---KIAHFDLKPENIMLL----DKNIPIPHIKLIDFGLAHEIEDG 172
Query: 277 THM-SAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ GT ++APE++ +D+WS GV+ + LL+G P+
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 141 QEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+E AIK+ EN + V +E ++ DH V L KL + YA+ G
Sbjct: 33 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 92
Query: 199 PLNRVLAGRKIRP---DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L + + RKI + +I + YLH + +IHRDLK N+LL NE
Sbjct: 93 ELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILL-----NE 142
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAA----GTYAWMAPEVIKTSIFSKASDVWSYGVVL 311
D+ ++ITDFG A+ + + + A GT +++PE++ K+SD+W+ G ++
Sbjct: 143 DMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 199
Query: 312 WELLTGEIPYKSIN 325
++L+ G P+++ N
Sbjct: 200 YQLVAGLPPFRAGN 213
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 141 QEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+E AIK+ EN + V +E ++ DH V L KL + YA+ G
Sbjct: 56 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 115
Query: 199 PLNRVLAGRKIRP---DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L + + RKI + +I + YLH + +IHRDLK N+LL NE
Sbjct: 116 ELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILL-----NE 165
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAA----GTYAWMAPEVIKTSIFSKASDVWSYGVVL 311
D+ ++ITDFG A+ + + + A GT +++PE++ K+SD+W+ G ++
Sbjct: 166 DMH---IQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCII 222
Query: 312 WELLTGEIPYKSIN 325
++L+ G P+++ N
Sbjct: 223 YQLVAGLPPFRAGN 236
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 141 QEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+E AIK+ EN + V +E ++ DH V L KL + YA+ G
Sbjct: 56 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 115
Query: 199 PLNRVLAGRKIRP---DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L + + RKI + +I + YLH + +IHRDLK N+LL NE
Sbjct: 116 ELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILL-----NE 165
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAA----GTYAWMAPEVIKTSIFSKASDVWSYGVVL 311
D+ ++ITDFG A+ + + + A GT +++PE++ K+SD+W+ G ++
Sbjct: 166 DMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 222
Query: 312 WELLTGEIPYKSIN 325
++L+ G P+++ N
Sbjct: 223 YQLVAGLPPFRAGN 236
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 17/220 (7%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDW 217
+++ +E + L H N + G L+ LVMEY G + + +K +V +
Sbjct: 99 QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA 158
Query: 218 AIQIA-EGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
A +G+ YLH ++IHRD+K+ N+LLSEP +K+ DFG A +
Sbjct: 159 VTHGALQGLAYLHSH---NMIHRDVKAGNILLSEP--------GLVKLGDFGSASIMAPA 207
Query: 277 THMSAAGTYAWMAPEVI---KTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXX 333
GT WMAPEVI + DVWS G+ EL + P ++N
Sbjct: 208 NXF--VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 265
Query: 334 XXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILK 373
N+ + F+ +++C + RP+ + +LK
Sbjct: 266 AQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 141 QEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+E AIK+ EN + V +E ++ DH V L KL + YA+ G
Sbjct: 58 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 117
Query: 199 PLNRVLAGRKIRP---DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L + + RKI + +I + YLH + +IHRDLK N+LL NE
Sbjct: 118 ELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILL-----NE 167
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAA----GTYAWMAPEVIKTSIFSKASDVWSYGVVL 311
D+ ++ITDFG A+ + + + A GT +++PE++ K+SD+W+ G ++
Sbjct: 168 DMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 224
Query: 312 WELLTGEIPYKSIN 325
++L+ G P+++ N
Sbjct: 225 YQLVAGLPPFRAGN 238
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 141 QEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+E AIK+ EN + V +E ++ DH V L KL + YA+ G
Sbjct: 56 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 115
Query: 199 PLNRVLAGRKIRP---DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L + + RKI + +I + YLH + +IHRDLK N+LL NE
Sbjct: 116 ELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILL-----NE 165
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAA----GTYAWMAPEVIKTSIFSKASDVWSYGVVL 311
D+ ++ITDFG A+ + + + A GT +++PE++ K+SD+W+ G ++
Sbjct: 166 DMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 222
Query: 312 WELLTGEIPYKSIN 325
++L+ G P+++ N
Sbjct: 223 YQLVAGLPPFRAGN 236
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 141 QEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+E AIK+ EN + V +E ++ DH V L KL + YA+ G
Sbjct: 58 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 117
Query: 199 PLNRVLAGRKIRP---DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L + + RKI + +I + YLH + +IHRDLK N+LL NE
Sbjct: 118 ELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILL-----NE 167
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAA----GTYAWMAPEVIKTSIFSKASDVWSYGVVL 311
D+ ++ITDFG A+ + + + A GT +++PE++ K+SD+W+ G ++
Sbjct: 168 DMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 224
Query: 312 WELLTGEIPYKSIN 325
++L+ G P+++ N
Sbjct: 225 YQLVAGLPPFRAGN 238
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 121/268 (45%), Gaps = 26/268 (9%)
Query: 132 KVYKGI---------YEKQEVAIKV---AHPNPDENILENVKQEGKLLWLFDHRNIVSLI 179
K++KG+ + EV +KV AH N E+ E KL H+++V
Sbjct: 23 KIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL----SHKHLVLNY 78
Query: 180 GVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVL--VDWAIQIAEGMNYLHCQAPISLI 237
GVC+ + LV E+ + G L+ L K ++L ++ A Q+A M++L +LI
Sbjct: 79 GVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLI 135
Query: 238 HRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKT-S 296
H ++ + N+LL + + +K++D G++ V + W+ PE I+
Sbjct: 136 HGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQE--RIPWVPPECIENPK 193
Query: 297 IFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEA 356
+ A+D WS+G LWE+ +G S ++ LP P L+
Sbjct: 194 NLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPKAAE--LANLINN 251
Query: 357 CWEADSHMRPSFKTILKALNNIVHSEFI 384
C + + RPSF+ I++ LN++ + +
Sbjct: 252 CMDYEPDHRPSFRAIIRDLNSLFTPDLV 279
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 141 QEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+E AIK+ EN + V +E ++ DH V L KL + YA+ G
Sbjct: 59 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 118
Query: 199 PLNRVLAGRKIRP---DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L + + RKI + +I + YLH + +IHRDLK N+LL NE
Sbjct: 119 ELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILL-----NE 168
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAA----GTYAWMAPEVIKTSIFSKASDVWSYGVVL 311
D+ ++ITDFG A+ + + + A GT +++PE++ K+SD+W+ G ++
Sbjct: 169 DMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 225
Query: 312 WELLTGEIPYKSIN 325
++L+ G P+++ N
Sbjct: 226 YQLVAGLPPFRAGN 239
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 141 QEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+E AIK+ EN + V +E ++ DH V L KL + YA+ G
Sbjct: 63 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNG 122
Query: 199 PLNRVLAGRKIRP---DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L + + RKI + +I + YLH + +IHRDLK N+LL NE
Sbjct: 123 ELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILL-----NE 172
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAA----GTYAWMAPEVIKTSIFSKASDVWSYGVVL 311
D+ ++ITDFG A+ + + + A GT +++PE++ K+SD+W+ G ++
Sbjct: 173 DMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 229
Query: 312 WELLTGEIPYKSIN 325
++L+ G P+++ N
Sbjct: 230 YQLVAGLPPFRAGN 243
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 10/167 (5%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+ +++E ++ H NIV L + LV + GG L + R+ +
Sbjct: 48 FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS 107
Query: 217 WAIQ-IAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK 275
IQ I E + Y H ++HR+LK N+LL+ + +K+ DFGLA EV
Sbjct: 108 HCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKG-----AAVKLADFGLAIEVND 159
Query: 276 TTHMSA-AGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ AGT +++PEV+K +SK D+W+ GV+L+ LL G P+
Sbjct: 160 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 141 QEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+E AIK+ EN + V +E ++ DH V L KL + YA+ G
Sbjct: 58 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 117
Query: 199 PLNRVLAGRKIRP---DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L + + RKI + +I + YLH + +IHRDLK N+LL NE
Sbjct: 118 ELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILL-----NE 167
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAA----GTYAWMAPEVIKTSIFSKASDVWSYGVVL 311
D+ ++ITDFG A+ + + + A GT +++PE++ K+SD+W+ G ++
Sbjct: 168 DMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 224
Query: 312 WELLTGEIPYKSIN 325
++L+ G P+++ N
Sbjct: 225 YQLVAGLPPFRAGN 238
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 141 QEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+E AIK+ EN + V +E ++ DH V L KL + YA+ G
Sbjct: 61 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 120
Query: 199 PLNRVLAGRKIRP---DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L + + RKI + +I + YLH + +IHRDLK N+LL NE
Sbjct: 121 ELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILL-----NE 170
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAA----GTYAWMAPEVIKTSIFSKASDVWSYGVVL 311
D+ ++ITDFG A+ + + + A GT +++PE++ K+SD+W+ G ++
Sbjct: 171 DMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 227
Query: 312 WELLTGEIPYKSIN 325
++L+ G P+++ N
Sbjct: 228 YQLVAGLPPFRAGN 241
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 10/167 (5%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+ +++E ++ H NIV L + LV + GG L + R+ +
Sbjct: 49 FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS 108
Query: 217 WAIQ-IAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK 275
IQ I E + Y H ++HR+LK N+LL+ + +K+ DFGLA EV
Sbjct: 109 HCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKG-----AAVKLADFGLAIEVND 160
Query: 276 TTHMSA-AGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ AGT +++PEV+K +SK D+W+ GV+L+ LL G P+
Sbjct: 161 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 141 QEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+E AIK+ EN + V +E ++ DH V L KL + YA+ G
Sbjct: 58 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 117
Query: 199 PLNRVLAGRKIRP---DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L + + RKI + +I + YLH + +IHRDLK N+LL NE
Sbjct: 118 ELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILL-----NE 167
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAA----GTYAWMAPEVIKTSIFSKASDVWSYGVVL 311
D+ ++ITDFG A+ + + + A GT +++PE++ K+SD+W+ G ++
Sbjct: 168 DMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCII 224
Query: 312 WELLTGEIPYKSIN 325
++L+ G P+++ N
Sbjct: 225 YQLVAGLPPFRAGN 238
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 10/167 (5%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+ +++E ++ H NIV L + LV + GG L + R+ +
Sbjct: 49 FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS 108
Query: 217 WAIQ-IAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK 275
IQ I E + Y H ++HR+LK N+LL+ + +K+ DFGLA EV
Sbjct: 109 HCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKG-----AAVKLADFGLAIEVND 160
Query: 276 TTHMSA-AGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ AGT +++PEV+K +SK D+W+ GV+L+ LL G P+
Sbjct: 161 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 141 QEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+E AIK+ EN + V +E ++ DH V L KL + YA+ G
Sbjct: 58 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 117
Query: 199 PLNRVLAGRKIRP---DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L + + RKI + +I + YLH + +IHRDLK N+LL NE
Sbjct: 118 ELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILL-----NE 167
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAA----GTYAWMAPEVIKTSIFSKASDVWSYGVVL 311
D+ ++ITDFG A+ + + + A GT +++PE++ K+SD+W+ G ++
Sbjct: 168 DMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 224
Query: 312 WELLTGEIPYKSIN 325
++L+ G P+++ N
Sbjct: 225 YQLVAGLPPFRAGN 238
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 141 QEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+E AIK+ EN + V +E ++ DH V L KL + YA+ G
Sbjct: 40 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 99
Query: 199 PLNRVLAGRKIRP---DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L + + RKI + +I + YLH + +IHRDLK N+LL NE
Sbjct: 100 ELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILL-----NE 149
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAA----GTYAWMAPEVIKTSIFSKASDVWSYGVVL 311
D+ ++ITDFG A+ + + + A GT +++PE++ K+SD+W+ G ++
Sbjct: 150 DMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 206
Query: 312 WELLTGEIPYKSIN 325
++L+ G P+++ N
Sbjct: 207 YQLVAGLPPFRAGN 220
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 11/167 (6%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDW 217
+ +++E ++ L H NIV L + L+ + GG L + R+ +
Sbjct: 66 QKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASH 125
Query: 218 AIQ-IAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
IQ I E + LHC + ++HRDLK N+LL+ ++ +K+ DFGLA EV
Sbjct: 126 CIQQILEAV--LHCHQ-MGVVHRDLKPENLLLASKLKG-----AAVKLADFGLAIEVEGE 177
Query: 277 TH--MSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
AGT +++PEV++ + K D+W+ GV+L+ LL G P+
Sbjct: 178 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 11/167 (6%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDW 217
+ +++E ++ L H NIV L + LV + GG L + R+ +
Sbjct: 48 QKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH 107
Query: 218 AIQ-IAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
IQ I E +N+ H ++HRDLK N+LL+ + +K+ DFGLA EV
Sbjct: 108 CIQQILESVNHCHLNG---IVHRDLKPENLLLASKSKG-----AAVKLADFGLAIEVQGD 159
Query: 277 TH--MSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
AGT +++PEV++ + K D+W+ GV+L+ LL G P+
Sbjct: 160 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 89/175 (50%), Gaps = 17/175 (9%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQS-PKLCLVMEYARGGPLNRVL--AGRKIR 210
++ +E E ++L L ++ + C Q+ +L VMEY GG L + GR
Sbjct: 382 DDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKE 441
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
P + +A +IA G+ +L + +I+RDLK NV+L +KI DFG+
Sbjct: 442 PHAVF-YAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSE--------GHIKIADFGMC 489
Query: 271 REVY--KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKS 323
+E T GT ++APE+I + K+ D W++GV+L+E+L G+ P++
Sbjct: 490 KENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 544
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 93/168 (55%), Gaps = 14/168 (8%)
Query: 159 NVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDW 217
NV+ E ++L +H I+ + + +V+E GG L ++V+ ++++ +
Sbjct: 67 NVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 125
Query: 218 AIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT 277
Q+ + YLH +IHRDLK NVLLS + ED +KITDFG ++ + +T+
Sbjct: 126 FYQMLLAVQYLHENG---IIHRDLKPENVLLSS--QEEDC---LIKITDFGHSKILGETS 177
Query: 278 HM-SAAGTYAWMAPEV---IKTSIFSKASDVWSYGVVLWELLTGEIPY 321
M + GT ++APEV + T+ +++A D WS GV+L+ L+G P+
Sbjct: 178 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 225
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA--GRKIRPDVL 214
+E+ E ++L + +V L + L +VMEYA GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+++ Q +K+TDFGLA+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLMID--------QQGYIKVTDFGLAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 299
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 93/168 (55%), Gaps = 14/168 (8%)
Query: 159 NVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDW 217
NV+ E ++L +H I+ + + +V+E GG L ++V+ ++++ +
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 119
Query: 218 AIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT 277
Q+ + YLH +IHRDLK NVLLS + ED +KITDFG ++ + +T+
Sbjct: 120 FYQMLLAVQYLHENG---IIHRDLKPENVLLSS--QEEDC---LIKITDFGHSKILGETS 171
Query: 278 HM-SAAGTYAWMAPEV---IKTSIFSKASDVWSYGVVLWELLTGEIPY 321
M + GT ++APEV + T+ +++A D WS GV+L+ L+G P+
Sbjct: 172 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 112/255 (43%), Gaps = 33/255 (12%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-N 201
VAIK E +++ E +L H NIV+L + L L+M+ GG L +
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 202 RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKT 261
R++ Q+ + + YLH + ++HRDLK N+L E+
Sbjct: 106 RIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDED-----SK 157
Query: 262 LKITDFGLAR-EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIP 320
+ I+DFGL++ E + +A GT ++APEV+ +SKA D WS GV+ + LL G P
Sbjct: 158 IMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 321 YKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVH 380
+ N +LF+ +++A +E DS P + I + + +
Sbjct: 218 FYDEND--------------------AKLFEQILKAEYEFDS---PYWDDISDSAKDFIR 254
Query: 381 SEFIQTPHESFHIMQ 395
+ P + F Q
Sbjct: 255 HLMEKDPEKRFTCEQ 269
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 93/168 (55%), Gaps = 14/168 (8%)
Query: 159 NVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDW 217
NV+ E ++L +H I+ + + +V+E GG L ++V+ ++++ +
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 119
Query: 218 AIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT 277
Q+ + YLH +IHRDLK NVLLS + ED +KITDFG ++ + +T+
Sbjct: 120 FYQMLLAVQYLHENG---IIHRDLKPENVLLSS--QEEDC---LIKITDFGHSKILGETS 171
Query: 278 HM-SAAGTYAWMAPEV---IKTSIFSKASDVWSYGVVLWELLTGEIPY 321
M + GT ++APEV + T+ +++A D WS GV+L+ L+G P+
Sbjct: 172 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 141 QEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+E AIK+ EN + V +E ++ DH V L KL + YA+ G
Sbjct: 55 REYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 114
Query: 199 PLNRVLAGRKIRP---DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L + + RKI + +I + YLH + +IHRDLK N+LL NE
Sbjct: 115 ELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILL-----NE 164
Query: 256 DLQFKTLKITDFGLAREVYKTTHMSAA----GTYAWMAPEVIKTSIFSKASDVWSYGVVL 311
D+ ++ITDFG A+ + + + A GT +++PE++ K+SD+W+ G ++
Sbjct: 165 DMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 221
Query: 312 WELLTGEIPYKSIN 325
++L+ G P+++ N
Sbjct: 222 YQLVAGLPPFRAGN 235
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 93/168 (55%), Gaps = 14/168 (8%)
Query: 159 NVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDW 217
NV+ E ++L +H I+ + + +V+E GG L ++V+ ++++ +
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 119
Query: 218 AIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT 277
Q+ + YLH +IHRDLK NVLLS + ED +KITDFG ++ + +T+
Sbjct: 120 FYQMLLAVQYLHENG---IIHRDLKPENVLLSS--QEEDC---LIKITDFGHSKILGETS 171
Query: 278 HM-SAAGTYAWMAPEV---IKTSIFSKASDVWSYGVVLWELLTGEIPY 321
M + GT ++APEV + T+ +++A D WS GV+L+ L+G P+
Sbjct: 172 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 93/168 (55%), Gaps = 14/168 (8%)
Query: 159 NVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDW 217
NV+ E ++L +H I+ + + +V+E GG L ++V+ ++++ +
Sbjct: 60 NVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 118
Query: 218 AIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT 277
Q+ + YLH +IHRDLK NVLLS + ED +KITDFG ++ + +T+
Sbjct: 119 FYQMLLAVQYLHENG---IIHRDLKPENVLLSS--QEEDC---LIKITDFGHSKILGETS 170
Query: 278 HM-SAAGTYAWMAPEV---IKTSIFSKASDVWSYGVVLWELLTGEIPY 321
M + GT ++APEV + T+ +++A D WS GV+L+ L+G P+
Sbjct: 171 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 218
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 112/255 (43%), Gaps = 33/255 (12%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-N 201
VAIK E +++ E +L H NIV+L + L L+M+ GG L +
Sbjct: 46 VAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 202 RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKT 261
R++ Q+ + + YLH + ++HRDLK N+L E+ +
Sbjct: 106 RIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIM--- 159
Query: 262 LKITDFGLAR-EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIP 320
I+DFGL++ E + +A GT ++APEV+ +SKA D WS GV+ + LL G P
Sbjct: 160 --ISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 321 YKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVH 380
+ N +LF+ +++A +E DS P + I + + +
Sbjct: 218 FYDENDA--------------------KLFEQILKAEYEFDS---PYWDDISDSAKDFIR 254
Query: 381 SEFIQTPHESFHIMQ 395
+ P + F Q
Sbjct: 255 HLMEKDPEKRFTCEQ 269
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 11/167 (6%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDW 217
+ +++E ++ L H NIV L + LV + GG L + R+ +
Sbjct: 48 QKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH 107
Query: 218 AIQ-IAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY-- 274
IQ I E +N+ H ++HRDLK N+LL+ + +K+ DFGLA EV
Sbjct: 108 CIQQILESVNHCHLNG---IVHRDLKPENLLLASKSKG-----AAVKLADFGLAIEVQGD 159
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ AGT +++PEV++ + K D+W+ GV+L+ LL G P+
Sbjct: 160 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 112/255 (43%), Gaps = 33/255 (12%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-N 201
VAIK E +++ E +L H NIV+L + L L+M+ GG L +
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 202 RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKT 261
R++ Q+ + + YLH + ++HRDLK N+L E+ +
Sbjct: 106 RIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIM--- 159
Query: 262 LKITDFGLAR-EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIP 320
I+DFGL++ E + +A GT ++APEV+ +SKA D WS GV+ + LL G P
Sbjct: 160 --ISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 321 YKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVH 380
+ N +LF+ +++A +E DS P + I + + +
Sbjct: 218 FYDEND--------------------AKLFEQILKAEYEFDS---PYWDDISDSAKDFIR 254
Query: 381 SEFIQTPHESFHIMQ 395
+ P + F Q
Sbjct: 255 HLMEKDPEKRFTCEQ 269
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVD 216
E +++E +L H NI++L V + L++E GG L LA ++ + +
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
+ QI +G+NYLH + + H DLK N++L ++++ +K+ DFGLA E+
Sbjct: 120 FIKQILDGVNYLHTK---KIAHFDLKPENIMLL----DKNIPIPHIKLIDFGLAHEIEDG 172
Query: 277 THM-SAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ GT ++APE++ +D+WS GV+ + LL+G P+
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 93/168 (55%), Gaps = 14/168 (8%)
Query: 159 NVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDW 217
NV+ E ++L +H I+ + + +V+E GG L ++V+ ++++ +
Sbjct: 186 NVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 244
Query: 218 AIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT 277
Q+ + YLH +IHRDLK NVLLS + ED +KITDFG ++ + +T+
Sbjct: 245 FYQMLLAVQYLHENG---IIHRDLKPENVLLSS--QEEDC---LIKITDFGHSKILGETS 296
Query: 278 HM-SAAGTYAWMAPEV---IKTSIFSKASDVWSYGVVLWELLTGEIPY 321
M + GT ++APEV + T+ +++A D WS GV+L+ L+G P+
Sbjct: 297 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 105/232 (45%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA--GRKIRPDVL 214
+E+ E ++L + +V L + L +VMEYA GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+++ Q +K+TDFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLMID--------QQGYIKVTDFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 299
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G S ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 67 HPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + + GT ++ P
Sbjct: 127 K---KVIHRDIKPENLLLGSAGE--------LKIADFGWSVHAPSSRRAALCGTLDYLPP 175
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF 350
E+I+ + + D+WS GV+ +E L G+ P+++ +++ P +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQDTYKRISRVEFTFPDFVTEGA 233
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ L+ + + RP + +L+
Sbjct: 234 RDLISRLLKHNPSQRPMLREVLE 256
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 112/255 (43%), Gaps = 33/255 (12%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-N 201
VAIK E +++ E +L H NIV+L + L L+M+ GG L +
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 202 RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKT 261
R++ Q+ + + YLH + ++HRDLK N+L E+ +
Sbjct: 106 RIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIM--- 159
Query: 262 LKITDFGLAR-EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIP 320
I+DFGL++ E + +A GT ++APEV+ +SKA D WS GV+ + LL G P
Sbjct: 160 --ISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 321 YKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVH 380
+ N +LF+ +++A +E DS P + I + + +
Sbjct: 218 FYDEND--------------------AKLFEQILKAEYEFDS---PYWDDISDSAKDFIR 254
Query: 381 SEFIQTPHESFHIMQ 395
+ P + F Q
Sbjct: 255 HLMEKDPEKRFTCEQ 269
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 13/180 (7%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNR 202
+A K+ H I + +E ++L + IV G ++ + ME+ GG L++
Sbjct: 37 MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ 96
Query: 203 VL--AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
VL AGR I +L +I + +G+ YL + I +HRD+K SN+L++ E
Sbjct: 97 VLKKAGR-IPEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGE------- 146
Query: 261 TLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIP 320
+K+ DFG++ ++ GT ++M+PE ++ + +S SD+WS G+ L E+ G P
Sbjct: 147 -IKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 84 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 143
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + + GT ++ P
Sbjct: 144 K---RVIHRDIKPENLLLGSAGE--------LKIADFGWSVHAPSSRRTTLCGTLDYLPP 192
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF 350
E+I+ + + D+WS GV+ +E L G+ P+++ +++ P +
Sbjct: 193 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGA 250
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ L+ + + RP + +L+
Sbjct: 251 RDLISRLLKHNPSQRPMLREVLE 273
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 93/168 (55%), Gaps = 14/168 (8%)
Query: 159 NVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDW 217
NV+ E ++L +H I+ + + +V+E GG L ++V+ ++++ +
Sbjct: 200 NVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 258
Query: 218 AIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT 277
Q+ + YLH +IHRDLK NVLLS + ED +KITDFG ++ + +T+
Sbjct: 259 FYQMLLAVQYLHENG---IIHRDLKPENVLLSS--QEEDC---LIKITDFGHSKILGETS 310
Query: 278 HM-SAAGTYAWMAPEV---IKTSIFSKASDVWSYGVVLWELLTGEIPY 321
M + GT ++APEV + T+ +++A D WS GV+L+ L+G P+
Sbjct: 311 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 358
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 82/159 (51%), Gaps = 10/159 (6%)
Query: 166 LLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEG 224
LL H NI++L V + +V E +GG L +++L + I +
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKT 128
Query: 225 MNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTH--MSAA 282
+ YLH Q ++HRDLK SN+L + N + +++I DFG A+++ M+
Sbjct: 129 VEYLHAQG---VVHRDLKPSNILYVDESGNPE----SIRICDFGFAKQLRAENGLLMTPC 181
Query: 283 GTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
T ++APEV++ + A D+WS GV+L+ +LTG P+
Sbjct: 182 YTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 103/254 (40%), Gaps = 62/254 (24%)
Query: 144 AIKVAHPNPDENI----LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
AIK+ + N I +E +K E +L+ H NI L V +CLVME GG
Sbjct: 55 AIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGH 114
Query: 200 L-----------------------------------NRVLAGRK------IRPDVLVDWA 218
L N + G + R ++ +
Sbjct: 115 LLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIM 174
Query: 219 IQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTH 278
QI ++YLH Q + HRD+K N L S N+ + +K+ DFGL++E YK +
Sbjct: 175 RQIFSALHYLHNQG---ICHRDIKPENFLFST---NKSFE---IKLVDFGLSKEFYKLNN 225
Query: 279 ------MSAAGTYAWMAPEVIKTS--IFSKASDVWSYGVVLWELLTGEIPYKSINXXXXX 330
+ AGT ++APEV+ T+ + D WS GV+L LL G +P+ +N
Sbjct: 226 GEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTI 285
Query: 331 XXXXXNKLTLPIPS 344
KL P+
Sbjct: 286 SQVLNKKLCFENPN 299
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 12/153 (7%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 152
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + + GT ++ P
Sbjct: 153 K---RVIHRDIKPENLLLGSAGE--------LKIADFGWSVHAPSSRRTTLCGTLDYLPP 201
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKS 323
E+I+ + + D+WS GV+ +E L G+ P+++
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 234
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 25/197 (12%)
Query: 141 QEVAIKVAHPNPDENILENVKQEGKLLWLFD-HRNIVSLIGVCLQSPKLCLVMEYARGGP 199
QE A+K+ P +I V +E ++L+ HRN++ LI + + LV E RGG
Sbjct: 39 QEYAVKIIEKQPG-HIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS 97
Query: 200 LNRVLAGRKIRPDVLVDWAIQ-IAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
+ + R+ ++ +Q +A +++LH + + HRDLK N+L P Q
Sbjct: 98 ILSHIHKRRHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPN-----Q 149
Query: 259 FKTLKITDFGLAREVYKTTHMSA---------AGTYAWMAPEVIKT-----SIFSKASDV 304
+KI DFGL + S G+ +MAPEV++ SI+ K D+
Sbjct: 150 VSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDL 209
Query: 305 WSYGVVLWELLTGEIPY 321
WS GV+L+ LL+G P+
Sbjct: 210 WSLGVILYILLSGYPPF 226
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 105/232 (45%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA--GRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K AGT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 299
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 105/232 (45%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA--GRKIRPDVL 214
+E+ E ++L + +V L + L +VMEYA GG + L GR P
Sbjct: 86 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHAR 145
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+++ Q +K+TDFG A+ V
Sbjct: 146 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLMID--------QQGYIKVTDFGFAKRV- 192
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 193 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 253 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 300
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + + +GT ++ P
Sbjct: 128 K---RVIHRDIKPENLLLGSAGE--------LKIADFGWSCHAPSSRRTTLSGTLDYLPP 176
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF 350
E+I+ + + D+WS GV+ +E L G+ P+++ +++ P +
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGA 234
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ L+ + + RP + +L+
Sbjct: 235 RDLISRLLKHNPSQRPMLREVLE 257
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 84/164 (51%), Gaps = 13/164 (7%)
Query: 160 VKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAI 219
V++E L L H +I+ L V + +V+EYA G + ++ +++ D +
Sbjct: 56 VEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQ 115
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
QI + Y H ++HRDLK N+LL + + +KI DFGL+ + +
Sbjct: 116 QIICAIEYCHRH---KIVHRDLKPENLLLDDNL--------NVKIADFGLSNIMTDGNFL 164
Query: 280 -SAAGTYAWMAPEVIKTSIFSKAS-DVWSYGVVLWELLTGEIPY 321
++ G+ + APEVI +++ DVWS G+VL+ +L G +P+
Sbjct: 165 KTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPF 208
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 105/232 (45%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA--GRKIRPDVL 214
+E+ E ++L + +V L + L +VMEYA GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+++ Q +K+TDFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLMID--------QQGYIKVTDFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 299
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA--GRKIRPDVL 214
+E+ E ++L + +V L + L +VMEYA GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+++ Q +++TDFGLA+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLMID--------QQGYIQVTDFGLAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 299
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 12/171 (7%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + + GT ++ P
Sbjct: 130 K---RVIHRDIKPENLLLGSAGE--------LKIADFGWSVHAPSSRRTTLCGTLDYLPP 178
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP 341
E+I+ + + D+WS GV+ +E L G+ P+++ + T P
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 229
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 86/171 (50%), Gaps = 15/171 (8%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-----NRVLAGRKIRPD 212
E++K+E + + H +IV L+ L +V E+ G L R AG
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEA 130
Query: 213 VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE 272
V + QI E + Y H ++IHRD+K VLL+ EN +K+ FG+A +
Sbjct: 131 VASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASK-ENS----APVKLGGFGVAIQ 182
Query: 273 VYKTTHMSAA--GTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ ++ ++ GT +MAPEV+K + K DVW GV+L+ LL+G +P+
Sbjct: 183 LGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + + GT ++ P
Sbjct: 127 K---RVIHRDIKPENLLLGSAGE--------LKIADFGWSVHAPSSRRTTLCGTLDYLPP 175
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF 350
E+I+ + + D+WS GV+ +E L G+ P+++ +++ P +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGA 233
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ L+ + + RP + +L+
Sbjct: 234 RDLISRLLKHNPSQRPMLREVLE 256
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 119/277 (42%), Gaps = 44/277 (15%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+K++VAIK + + ++ + +E + + H NIVS + +L LVM+ GG
Sbjct: 39 KKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 98
Query: 199 P----LNRVLAGRKIRPDVLVDWAI-----QIAEGMNYLHCQAPISLIHRDLKSSNVLLS 249
+ ++A + + VL + I ++ EG+ YLH I HRD+K+ N+LL
Sbjct: 99 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQI---HRDVKAGNILLG 155
Query: 250 E--PIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVI-KTSIFSKASDVWS 306
E ++ D T + R + T + GT WMAPEV+ + + +D+WS
Sbjct: 156 EDGSVQIADFGVSAFLATGGDITRNKVRKTFV---GTPCWMAPEVMEQVRGYDFKADIWS 212
Query: 307 YGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQL----------------F 350
+G+ EL TG PY L L + + P L F
Sbjct: 213 FGITAIELATGAAPYHKYPPMKV--------LMLTLQNDPPSLETGVQDKEMLKKYGKSF 264
Query: 351 KTLMEACWEADSHMRPSFKTIL--KALNNIVHSEFIQ 385
+ ++ C + D RP+ +L K + EF+Q
Sbjct: 265 RKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEFLQ 301
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 66 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 125
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + + GT ++ P
Sbjct: 126 K---RVIHRDIKPENLLLGSAGE--------LKIADFGWSVHAPSSRRTTLCGTLDYLPP 174
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF 350
E+I+ + + D+WS GV+ +E L G+ P+++ +++ P +
Sbjct: 175 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGA 232
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ L+ + + RP + +L+
Sbjct: 233 RDLISRLLKHNPSQRPMLREVLE 255
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 86/171 (50%), Gaps = 15/171 (8%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-----NRVLAGRKIRPD 212
E++K+E + + H +IV L+ L +V E+ G L R AG
Sbjct: 73 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEA 132
Query: 213 VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE 272
V + QI E + Y H ++IHRD+K VLL+ EN +K+ FG+A +
Sbjct: 133 VASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASK-ENS----APVKLGGFGVAIQ 184
Query: 273 VYKTTHMSAA--GTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ ++ ++ GT +MAPEV+K + K DVW GV+L+ LL+G +P+
Sbjct: 185 LGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 235
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 12/171 (7%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + + GT ++ P
Sbjct: 132 K---RVIHRDIKPENLLLGSAGE--------LKIADFGWSVHAPSSRRTTLCGTLDYLPP 180
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP 341
E+I+ + + D+WS GV+ +E L G+ P+++ + T P
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 231
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + + GT ++ P
Sbjct: 130 K---RVIHRDIKPENLLLGSAGE--------LKIADFGWSVHAPSSRRTTLCGTLDYLPP 178
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF 350
E+I+ + + D+WS GV+ +E L G+ P+++ +++ P +
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGA 236
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ L+ + + RP + +L+
Sbjct: 237 RDLISRLLKHNPSQRPMLREVLE 259
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 112/239 (46%), Gaps = 33/239 (13%)
Query: 159 NVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWA 218
+++ E +L H NIV+L + L LVM+ GG L + + +
Sbjct: 66 SIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTL 125
Query: 219 I-QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT 277
I Q+ + + YLH + ++HRDLK N+L ++D + K + I+DFGL++ K
Sbjct: 126 IRQVLDAVYYLH---RMGIVHRDLKPENLLYY----SQDEESKIM-ISDFGLSKMEGKGD 177
Query: 278 HMS-AAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXN 336
MS A GT ++APEV+ +SKA D WS GV+ + LL G P+ N
Sbjct: 178 VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND---------- 227
Query: 337 KLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQ 395
+LF+ +++A +E DS P + I + + + + + P++ + Q
Sbjct: 228 ----------SKLFEQILKAEYEFDS---PYWDDISDSAKDFIRNLMEKDPNKRYTCEQ 273
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 106 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 165
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 166 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 212
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K + GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 213 KGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 272
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 273 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 320
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 64 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 123
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + + GT ++ P
Sbjct: 124 K---RVIHRDIKPENLLLGSAGE--------LKIADFGWSVHAPSSRRTTLCGTLDYLPP 172
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF 350
E+I+ + + D+WS GV+ +E L G+ P+++ +++ P +
Sbjct: 173 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGA 230
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ L+ + + RP + +L+
Sbjct: 231 RDLISRLLKHNPSQRPMLREVLE 253
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 11/167 (6%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDW 217
+ +++E ++ L H NIV L + L+ + GG L + R+ +
Sbjct: 55 QKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASH 114
Query: 218 AIQ-IAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY-- 274
IQ I E + LHC + ++HR+LK N+LL+ L+ +K+ DFGLA EV
Sbjct: 115 CIQQILEAV--LHCHQ-MGVVHRNLKPENLLLAS-----KLKGAAVKLADFGLAIEVEGE 166
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ AGT +++PEV++ + K D+W+ GV+L+ LL G P+
Sbjct: 167 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + + GT ++ P
Sbjct: 127 K---RVIHRDIKPENLLLGSAGE--------LKIADFGWSVHAPSSRRAALCGTLDYLPP 175
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF 350
E+I+ + + D+WS GV+ +E L G+ P+++ +++ P +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGA 233
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ L+ + + RP + +L+
Sbjct: 234 RDLISRLLKHNPSQRPMLREVLE 256
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 19/201 (9%)
Query: 188 LCLVMEYARGGPLNRVLA--GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSN 245
L +VMEYA GG + L GR P +A QI YLH + LI+RDLK N
Sbjct: 117 LYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKPEN 172
Query: 246 VLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVW 305
+++ Q +K+TDFG A+ V K GT ++APE+I + ++KA D W
Sbjct: 173 LMID--------QQGYIKVTDFGFAKRV-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 306 SYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMR 365
+ GV+++E+ G P+ + K+ PS K L+ + D R
Sbjct: 224 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDLKDLLRNLLQVDLTKR 281
Query: 366 PSFKTILKALNNIVHSEFIQT 386
F + +N+I + ++ T
Sbjct: 282 --FGNLKNGVNDIKNHKWFAT 300
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 72 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 131
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ E +++TDFG A+ V
Sbjct: 132 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDEQ--------GYIQVTDFGFAKRV- 178
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 179 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 238
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 239 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 286
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 130
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + + GT ++ P
Sbjct: 131 K---RVIHRDIKPENLLLGSAGE--------LKIADFGWSVHAPSSRRTTLCGTLDYLPP 179
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF 350
E+I+ + + D+WS GV+ +E L G+ P+++ +++ P +
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGA 237
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ L+ + + RP + +L+
Sbjct: 238 RDLISRLLKHNPSQRPMLREVLE 260
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVD 216
E++++E +L H N+++L V + L++E GG L LA ++ + + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-YK 275
+ QI G+ YLH + + H DLK N++L + ++ +KI DFGLA ++ +
Sbjct: 119 FLKQILNGVYYLHS---LQIAHFDLKPENIMLL----DRNVPKPRIKIIDFGLAHKIDFG 171
Query: 276 TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ GT A++APE++ +D+WS GV+ + LL+G P+
Sbjct: 172 NEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + + GT ++ P
Sbjct: 130 K---RVIHRDIKPENLLLGSAGE--------LKIADFGWSVHAPSSRRAALCGTLDYLPP 178
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF 350
E+I+ + + D+WS GV+ +E L G+ P+++ +++ P +
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGA 236
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ L+ + + RP + +L+
Sbjct: 237 RDLISRLLKHNPSQRPMLREVLE 259
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 14/203 (6%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + GT ++ P
Sbjct: 127 K---RVIHRDIKPENLLLGSAGE--------LKIADFGWSVHAPSSRRTDLCGTLDYLPP 175
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF 350
E+I+ + + D+WS GV+ +E L G+ P+++ +++ P +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGA 233
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ L+ + + RP + +L+
Sbjct: 234 RDLISRLLKHNPSQRPMLREVLE 256
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 14/203 (6%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 152
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + GT ++ P
Sbjct: 153 K---RVIHRDIKPENLLLGSAGE--------LKIADFGWSVHAPSSRRDDLCGTLDYLPP 201
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF 350
E+I+ + + D+WS GV+ +E L G+ P+++ +++ P +
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGA 259
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ L+ + + RP + +L+
Sbjct: 260 RDLISRLLKHNPSQRPMLREVLE 282
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 14/203 (6%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + GT ++ P
Sbjct: 127 K---RVIHRDIKPENLLLGSAGE--------LKIADFGWSVHAPSSRRTELCGTLDYLPP 175
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF 350
E+I+ + + D+WS GV+ +E L G+ P+++ +++ P +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGA 233
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ L+ + + RP + +L+
Sbjct: 234 RDLISRLLKHNPSQRPMLREVLE 256
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 105/234 (44%), Gaps = 23/234 (9%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLP--IPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ P S L + L++ + +F + +N+I + ++ T
Sbjct: 252 SGKVRFPSHFSSDLKDLLRNLLQV------DLTKAFGNLKNGVNDIKNHKWFAT 299
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 14/203 (6%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + GT ++ P
Sbjct: 128 K---RVIHRDIKPENLLLGSAGE--------LKIADFGWSVHAPSSRRTDLCGTLDYLPP 176
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF 350
E+I+ + + D+WS GV+ +E L G+ P+++ +++ P +
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGA 234
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ L+ + + RP + +L+
Sbjct: 235 RDLISRLLKHNPSQRPMLREVLE 257
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 14/203 (6%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + GT ++ P
Sbjct: 132 K---RVIHRDIKPENLLLGSAGE--------LKIADFGWSVHAPSSRRTDLCGTLDYLPP 180
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF 350
E+I+ + + D+WS GV+ +E L G+ P+++ +++ P +
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGA 238
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ L+ + + RP + +L+
Sbjct: 239 RDLISRLLKHNPSQRPMLREVLE 261
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 80/159 (50%), Gaps = 10/159 (6%)
Query: 166 LLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEG 224
LL H NI++L V + +V E +GG L +++L + I +
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKT 128
Query: 225 MNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT 284
+ YLH Q ++HRDLK SN+L + N + +++I DFG A+++ +
Sbjct: 129 VEYLHAQG---VVHRDLKPSNILYVDESGNPE----SIRICDFGFAKQLRAENGLLXTPC 181
Query: 285 YA--WMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
Y ++APEV++ + A D+WS GV+L+ LTG P+
Sbjct: 182 YTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 12/171 (7%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 128
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + GT ++ P
Sbjct: 129 K---RVIHRDIKPENLLLGSAGE--------LKIADFGWSVHAPSSRRXXLCGTLDYLPP 177
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP 341
E+I+ + + D+WS GV+ +E L G+ P+++ + T P
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 228
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 14/203 (6%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + GT ++ P
Sbjct: 130 K---RVIHRDIKPENLLLGSAGE--------LKIADFGWSVHAPSSRRXXLCGTLDYLPP 178
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF 350
E+I+ + + D+WS GV+ +E L G+ P+++ +++ P +
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGA 236
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ L+ + + RP + +L+
Sbjct: 237 RDLISRLLKHNPSQRPMLREVLE 259
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 299
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 14/203 (6%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + GT ++ P
Sbjct: 127 K---RVIHRDIKPENLLLGSAGE--------LKIADFGWSVHAPSSRRXXLCGTLDYLPP 175
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF 350
E+I+ + + D+WS GV+ +E L G+ P+++ +++ P +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGA 233
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ L+ + + RP + +L+
Sbjct: 234 RDLISRLLKHNPSQRPMLREVLE 256
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 14/203 (6%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + GT ++ P
Sbjct: 127 K---RVIHRDIKPENLLLGSAGE--------LKIADFGWSVHAPSSRRTXLCGTLDYLPP 175
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF 350
E+I+ + + D+WS GV+ +E L G+ P+++ +++ P +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGA 233
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ L+ + + RP + +L+
Sbjct: 234 RDLISRLLKHNPSQRPMLREVLE 256
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 12/171 (7%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + + L K + ++A ++Y H
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + + GT ++ P
Sbjct: 132 K---RVIHRDIKPENLLLGSAGE--------LKIADFGWSVHAPSSRRTTLCGTLDYLPP 180
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP 341
E+I+ + + D+WS GV+ +E L G+ P+++ + T P
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 231
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 19/201 (9%)
Query: 188 LCLVMEYARGGPLNRVLA--GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSN 245
L +VMEYA GG + L GR P +A QI YLH + LI+RDLK N
Sbjct: 117 LYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKPEN 172
Query: 246 VLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVW 305
+++ Q +K+TDFG A+ V K GT ++APE+I + ++KA D W
Sbjct: 173 LMID--------QQGYIKVTDFGFAKRV-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 306 SYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMR 365
+ GV+++E+ G P+ + K+ PS K L+ + D R
Sbjct: 224 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDLKDLLRNLLQVDLTKR 281
Query: 366 PSFKTILKALNNIVHSEFIQT 386
F + +N+I + ++ T
Sbjct: 282 --FGNLKNGVNDIKNHKWFAT 300
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 19/201 (9%)
Query: 188 LCLVMEYARGGPLNRVLA--GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSN 245
L +VMEYA GG + L GR P +A QI YLH + LI+RDLK N
Sbjct: 117 LYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKPEN 172
Query: 246 VLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVW 305
+++ Q +K+TDFG A+ V K GT ++APE+I + ++KA D W
Sbjct: 173 LMID--------QQGYIKVTDFGFAKRV-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 306 SYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMR 365
+ GV+++E+ G P+ + K+ PS K L+ + D R
Sbjct: 224 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDLKDLLRNLLQVDLTKR 281
Query: 366 PSFKTILKALNNIVHSEFIQT 386
F + +N+I + ++ T
Sbjct: 282 --FGNLKNGVNDIKNHKWFAT 300
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 80 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHAR 139
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 140 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 186
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 187 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 246
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 247 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 294
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 299
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 12/171 (7%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + GT ++ P
Sbjct: 127 K---RVIHRDIKPENLLLGSAGE--------LKIADFGWSVHAPSSRRTDLCGTLDYLPP 175
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP 341
E+I+ + + D+WS GV+ +E L G+ P+++ + T P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 226
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 299
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 93/173 (53%), Gaps = 20/173 (11%)
Query: 159 NVKQEGKLLWLFD-HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDW 217
N ++E L L + H NIV L V LVME GG L + +K + +
Sbjct: 51 NTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASY 110
Query: 218 AI-QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR----- 271
+ ++ ++++H + ++HRDLK N+L ++ EN++L+ +KI DFG AR
Sbjct: 111 IMRKLVSAVSHMH---DVGVVHRDLKPENLLFTD--ENDNLE---IKIIDFGFARLKPPD 162
Query: 272 -EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKS 323
+ KT T + APE++ + + ++ D+WS GV+L+ +L+G++P++S
Sbjct: 163 NQPLKT----PCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQS 211
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 106 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHAR 165
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 166 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 212
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 213 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 272
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 273 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 320
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA--GRKIRPDVL 214
+E+ E ++L + +V L + L +VMEYA GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+++ Q +++TDFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLMID--------QQGYIQVTDFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 299
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + + GT ++ P
Sbjct: 128 K---RVIHRDIKPENLLLGSAGE--------LKIADFGWSVHAPSSRRDTLCGTLDYLPP 176
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF 350
E+I+ + + D+WS GV+ +E L G+ P+++ +++ P +
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGA 234
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ L+ + + RP + +L+
Sbjct: 235 RDLISRLLKHNPSQRPMLREVLE 257
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 14/203 (6%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + + GT ++ P
Sbjct: 132 K---RVIHRDIKPENLLLGSAGE--------LKIADFGWSVHAPSSRRTTLCGTLDYLPP 180
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF 350
E I+ + D+WS GV+ +E L G+ P+++ +++ P +
Sbjct: 181 EXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGA 238
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ L+ + + RP + +L+
Sbjct: 239 RDLISRLLKHNPSQRPXLREVLE 261
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 23/234 (9%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLP--IPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ P S L + L++ + F + +N+I + ++ T
Sbjct: 252 SGKVRFPSHFSSDLKDLLRNLLQV------DLTKRFGNLKNGVNDIKNHKWFAT 299
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 83/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 176
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ ++ +++ D+WS G ++ ELLTG
Sbjct: 177 DEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 115/271 (42%), Gaps = 42/271 (15%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPD-ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCL 190
+VY G + EVAI++ D E+ L+ K+E H N+V +G C+ P L +
Sbjct: 48 QVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAI 106
Query: 191 VMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
+ +G L V+ KI DV A +I +GM YLH + ++H+DLKS NV
Sbjct: 107 ITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFY 163
Query: 249 SEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTY--------AW---MAPEVIKTSI 297
+ ITDFGL + + + AG W +APE+I+
Sbjct: 164 DN---------GKVVITDFGL----FSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLS 210
Query: 298 ---------FSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXN-KLTLPIPSTCP 347
FSK SDV++ G + +EL E P+K+ K L
Sbjct: 211 PDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGK 270
Query: 348 QLFKTLMEACWEADSHMRPSFKTILKALNNI 378
++ L+ CW + RP+F ++ L +
Sbjct: 271 EISDILL-FCWAFEQEERPTFTKLMDMLEKL 300
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 86 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR 145
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 146 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 192
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K + GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 193 KGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 253 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 300
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 78 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHAR 137
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 138 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 184
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 185 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 244
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 245 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 292
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 18/195 (9%)
Query: 139 EKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
+K++VAIK + + ++ + +E + + H NIVS + +L LVM+ GG
Sbjct: 34 KKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 93
Query: 199 P----LNRVLAGRKIRPDVLVDWAI-----QIAEGMNYLHCQAPISLIHRDLKSSNVLLS 249
+ ++A + + VL + I ++ EG+ YLH I HRD+K+ N+LL
Sbjct: 94 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQI---HRDVKAGNILLG 150
Query: 250 E--PIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVI-KTSIFSKASDVWS 306
E ++ D T + R + T + GT WMAPEV+ + + +D+WS
Sbjct: 151 EDGSVQIADFGVSAFLATGGDITRNKVRKTFV---GTPCWMAPEVMEQVRGYDFKADIWS 207
Query: 307 YGVVLWELLTGEIPY 321
+G+ EL TG PY
Sbjct: 208 FGITAIELATGAAPY 222
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 299
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 86 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR 145
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 146 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 192
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 193 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 253 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIXNHKWFAT 300
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA--GRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 299
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 71 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR 130
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 131 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 177
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K + GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 178 KGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 237
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 238 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKDGVNDIKNHKWFAT 285
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA--GRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 299
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA--GRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 299
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 86 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHAR 145
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 146 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 192
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 193 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 253 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 300
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 299
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVD 216
E++++E +L H N+++L V + L++E GG L LA ++ + + +
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 117
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-YK 275
+ QI G+ YLH + + H DLK N++L + ++ +KI DFGLA ++ +
Sbjct: 118 FLKQILNGVYYLHS---LQIAHFDLKPENIMLL----DRNVPKPRIKIIDFGLAHKIDFG 170
Query: 276 TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ GT ++APE++ +D+WS GV+ + LL+G P+
Sbjct: 171 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVD 216
E++++E +L H N+++L V + L++E GG L LA ++ + + +
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 117
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-YK 275
+ QI G+ YLH + + H DLK N++L + ++ +KI DFGLA ++ +
Sbjct: 118 FLKQILNGVYYLHS---LQIAHFDLKPENIMLL----DRNVPKPRIKIIDFGLAHKIDFG 170
Query: 276 TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ GT ++APE++ +D+WS GV+ + LL+G P+
Sbjct: 171 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 86 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 145
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 146 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 192
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 193 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 253 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 300
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 23/189 (12%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEYA 195
K VAIK P + + +E K+L F H NI+ + + ++ K ++ +
Sbjct: 68 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHL 127
Query: 196 RGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
G L ++L + + D + + QI G+ Y+H +++HRDLK SN+LL+ +
Sbjct: 128 MGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXD-- 182
Query: 256 DLQFKTLKITDFGLAREVYKTTH------MSAAGTYAWMAPEVIKTSI-FSKASDVWSYG 308
LKI DFGLAR V H T + APE++ S ++K+ D+WS G
Sbjct: 183 ------LKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 235
Query: 309 VVLWELLTG 317
+L E+L+
Sbjct: 236 CILAEMLSN 244
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 14/203 (6%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + GT ++ P
Sbjct: 130 K---RVIHRDIKPENLLLGSAGE--------LKIADFGWSVHAPSSRRDDLCGTLDYLPP 178
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF 350
E+I+ + + D+WS GV+ +E L G+ P+++ +++ P +
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGA 236
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ L+ + + RP + +L+
Sbjct: 237 RDLISRLLKHNPSQRPMLREVLE 259
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVD 216
E++++E +L H N+++L V + L++E GG L LA ++ + + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-YK 275
+ QI G+ YLH + + H DLK N++L + ++ +KI DFGLA ++ +
Sbjct: 119 FLKQILNGVYYLHS---LQIAHFDLKPENIMLL----DRNVPKPRIKIIDFGLAHKIDFG 171
Query: 276 TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ GT ++APE++ +D+WS GV+ + LL+G P+
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVD 216
E++++E +L H N+++L V + L++E GG L LA ++ + + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-YK 275
+ QI G+ YLH + + H DLK N++L + ++ +KI DFGLA ++ +
Sbjct: 119 FLKQILNGVYYLHS---LQIAHFDLKPENIMLL----DRNVPKPRIKIIDFGLAHKIDFG 171
Query: 276 TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ GT ++APE++ +D+WS GV+ + LL+G P+
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVD 216
E++++E +L H N+++L V + L++E GG L LA ++ + + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-YK 275
+ QI G+ YLH + + H DLK N++L + ++ +KI DFGLA ++ +
Sbjct: 119 FLKQILNGVYYLHS---LQIAHFDLKPENIMLL----DRNVPKPRIKIIDFGLAHKIDFG 171
Query: 276 TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ GT ++APE++ +D+WS GV+ + LL+G P+
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 23/234 (9%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIV 251
Query: 335 XNKLTLP--IPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ P S L + L++ + F + +N+I + ++ T
Sbjct: 252 SGKVRFPSHFSSDLKDLLRNLLQV------DLTKRFGNLKNGVNDIKNHKWFAT 299
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVD 216
E++++E +L H N+++L V + L++E GG L LA ++ + + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-YK 275
+ QI G+ YLH + + H DLK N++L + ++ +KI DFGLA ++ +
Sbjct: 119 FLKQILNGVYYLHS---LQIAHFDLKPENIMLL----DRNVPKPRIKIIDFGLAHKIDFG 171
Query: 276 TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ GT ++APE++ +D+WS GV+ + LL+G P+
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVD 216
E++++E +L H N+++L V + L++E GG L LA ++ + + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-YK 275
+ QI G+ YLH + + H DLK N++L + ++ +KI DFGLA ++ +
Sbjct: 119 FLKQILNGVYYLHS---LQIAHFDLKPENIMLL----DRNVPKPRIKIIDFGLAHKIDFG 171
Query: 276 TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ GT ++APE++ +D+WS GV+ + LL+G P+
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKDGVNDIKNHKWFAT 299
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 14/203 (6%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYA-RGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA RG + K + ++A ++Y H
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + GT ++ P
Sbjct: 132 K---RVIHRDIKPENLLLGSAGE--------LKIADFGWSVHAPSSRRXXLXGTLDYLPP 180
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF 350
E+I+ + + D+WS GV+ +E L G+ P+++ +++ P +
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGA 238
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ L+ + + RP + +L+
Sbjct: 239 RDLISRLLKHNPSQRPMLREVLE 261
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 15/167 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA--GRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
K GT ++APE+I + ++KA D W+ GV+++E+ G P+
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVD 216
E++++E +L H N+++L V + L++E GG L LA ++ + + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-YK 275
+ QI G+ YLH + + H DLK N++L + ++ +KI DFGLA ++ +
Sbjct: 119 FLKQILNGVYYLHS---LQIAHFDLKPENIMLL----DRNVPKPRIKIIDFGLAHKIDFG 171
Query: 276 TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ GT ++APE++ +D+WS GV+ + LL+G P+
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 106 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR 165
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 166 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 212
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 213 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 272
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 273 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 320
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI +FG + + + GT ++ P
Sbjct: 130 K---RVIHRDIKPENLLLGSAGE--------LKIANFGWSVHAPSSRRTTLCGTLDYLPP 178
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF 350
E+I+ + + D+WS GV+ +E L G+ P+++ +++ P +
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFTFPDFVTEGA 236
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ L+ + + RP + +L+
Sbjct: 237 RDLISRLLKHNPSQRPMLREVLE 259
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 23/191 (12%)
Query: 142 EVAIK-VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL------CLVMEY 194
+VAIK + P E + +E +LL H N++ L+ V L LVM +
Sbjct: 52 KVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPF 111
Query: 195 ARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIEN 254
G L +++ K+ D + Q+ +G+ Y+H +IHRDLK N+ ++E E
Sbjct: 112 M-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCE- 166
Query: 255 EDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLW 312
LKI DFGLAR+ + M W APEVI + +++ D+WS G ++
Sbjct: 167 -------LKILDFGLARQA--DSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMA 217
Query: 313 ELLTGEIPYKS 323
E++TG+ +K
Sbjct: 218 EMITGKTLFKG 228
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVD 216
E++++E +L H N+++L V + L++E GG L LA ++ + + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-YK 275
+ QI G+ YLH + + H DLK N++L + ++ +KI DFGLA ++ +
Sbjct: 119 FLKQILNGVYYLHS---LQIAHFDLKPENIMLL----DRNVPKPRIKIIDFGLAHKIDFG 171
Query: 276 TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ GT ++APE++ +D+WS GV+ + LL+G P+
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 12/171 (7%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L K + ++A ++Y H
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 128
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI +FG + + + GT ++ P
Sbjct: 129 K---RVIHRDIKPENLLLGSAGE--------LKIANFGWSVHAPSSRRTTLCGTLDYLPP 177
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP 341
E+I+ + + D+WS GV+ +E L G+ P+++ + T P
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 228
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 78 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR 137
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 138 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 184
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 185 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 244
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 245 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 292
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 299
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 86 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR 145
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 146 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 192
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 193 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 253 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 300
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA--GRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 86 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR 145
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 146 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 192
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 193 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 253 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 300
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKDGVNDIKNHKWFAT 299
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA--GRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 299
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVD 216
E++++E +L H N+++L V + L++E GG L LA ++ + + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-YK 275
+ QI G+ YLH + + H DLK N++L + ++ +KI DFGLA ++ +
Sbjct: 119 FLKQILNGVYYLHS---LQIAHFDLKPENIMLL----DRNVPKPRIKIIDFGLAHKIDFG 171
Query: 276 TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ GT ++APE++ +D+WS GV+ + LL+G P+
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 299
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 86 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR 145
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 146 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 192
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 193 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 253 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 300
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVD 216
E++++E +L H N+++L V + L++E GG L LA ++ + + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-YK 275
+ QI G+ YLH + + H DLK N++L + ++ +KI DFGLA ++ +
Sbjct: 119 FLKQILNGVYYLHS---LQIAHFDLKPENIMLL----DRNVPKPRIKIIDFGLAHKIDFG 171
Query: 276 TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ GT ++APE++ +D+WS GV+ + LL+G P+
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 14/170 (8%)
Query: 155 NILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDV 213
+++ +K+E + L LF H +I+ L V +VMEY GG L + + ++
Sbjct: 53 DVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEME 112
Query: 214 LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV 273
QI ++Y H ++HRDLK NVLL + KI DFGL+ +
Sbjct: 113 ARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNA--------KIADFGLSNMM 161
Query: 274 YKTTHM-SAAGTYAWMAPEVIKTSIFSKAS-DVWSYGVVLWELLTGEIPY 321
+ ++ G+ + APEVI +++ D+WS GV+L+ LL G +P+
Sbjct: 162 SDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA--GRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKDGVNDIKNHKWFAT 299
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVD 216
E +++E +L H NI++L + + L++E GG L LA ++ + D
Sbjct: 60 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ 119
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
+ QI +G++YLH + + H DLK N++L ++++ +K+ DFG+A ++
Sbjct: 120 FLKQILDGVHYLHSK---RIAHFDLKPENIMLL----DKNVPNPRIKLIDFGIAHKIEAG 172
Query: 277 THM-SAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ GT ++APE++ +D+WS GV+ + LL+G P+
Sbjct: 173 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKDGVNDIKNHKWFAT 299
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 25/197 (12%)
Query: 141 QEVAIKVAHPNPDENILENVKQEGKLLWLFD-HRNIVSLIGVCLQSPKLCLVMEYARGGP 199
QE A+K+ P +I V +E ++L+ HRN++ LI + + LV E RGG
Sbjct: 39 QEYAVKIIEKQPG-HIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS 97
Query: 200 LNRVLAGRKIRPDVLVDWAIQ-IAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
+ + R+ ++ +Q +A +++LH + + HRDLK N+L P Q
Sbjct: 98 ILSHIHKRRHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPN-----Q 149
Query: 259 FKTLKITDFGLAREVYKTTHMSA---------AGTYAWMAPEVIKT-----SIFSKASDV 304
+KI DF L + S G+ +MAPEV++ SI+ K D+
Sbjct: 150 VSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDL 209
Query: 305 WSYGVVLWELLTGEIPY 321
WS GV+L+ LL+G P+
Sbjct: 210 WSLGVILYILLSGYPPF 226
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA--GRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +K+ DFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIKVADFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 299
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVD 216
E +++E +L H NI++L + + L++E GG L LA ++ + D
Sbjct: 53 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ 112
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
+ QI +G++YLH + + H DLK N++L ++++ +K+ DFG+A ++
Sbjct: 113 FLKQILDGVHYLHSK---RIAHFDLKPENIMLL----DKNVPNPRIKLIDFGIAHKIEAG 165
Query: 277 THM-SAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ GT ++APE++ +D+WS GV+ + LL+G P+
Sbjct: 166 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 23/223 (10%)
Query: 159 NVKQEGKLLWLFDHRNIVSLIGVCL--QSPKLCLVMEYARGGPLNRVLAGRKIRPDVLV- 215
NVK+E +LL H+N++ L+ V + K+ +VMEY G + + + R V
Sbjct: 52 NVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQA 111
Query: 216 -DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+ Q+ +G+ YLH Q ++H+D+K N+LL+ TLKI+ G+A ++
Sbjct: 112 HGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLT--------TGGTLKISALGVAEALH 160
Query: 275 ----KTTHMSAAGTYAWMAPEVIKT-SIFSKAS-DVWSYGVVLWELLTGEIPYKSINXXX 328
T ++ G+ A+ PE+ FS D+WS GV L+ + TG P++ N
Sbjct: 161 PFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN--I 218
Query: 329 XXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTI 371
K + IP C L++ E + R S + I
Sbjct: 219 YKLFENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQI 261
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA--GRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+++ Q +++TDFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLIID--------QQGYIQVTDFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 299
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVD 216
E +++E +L H NI++L + + L++E GG L LA ++ + D
Sbjct: 74 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ 133
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
+ QI +G++YLH + + H DLK N++L ++++ +K+ DFG+A ++
Sbjct: 134 FLKQILDGVHYLHSK---RIAHFDLKPENIMLL----DKNVPNPRIKLIDFGIAHKIEAG 186
Query: 277 THM-SAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ GT ++APE++ +D+WS GV+ + LL+G P+
Sbjct: 187 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 14/170 (8%)
Query: 155 NILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDV 213
+++ +K+E + L LF H +I+ L V +VMEY GG L + + ++
Sbjct: 53 DVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEME 112
Query: 214 LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV 273
QI ++Y H ++HRDLK NVLL + KI DFGL+ +
Sbjct: 113 ARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNA--------KIADFGLSNMM 161
Query: 274 YKTTHM-SAAGTYAWMAPEVIKTSIFSKAS-DVWSYGVVLWELLTGEIPY 321
+ + G+ + APEVI +++ D+WS GV+L+ LL G +P+
Sbjct: 162 SDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 87/166 (52%), Gaps = 9/166 (5%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVD 216
E++++E +L H N+++L V + L++E GG L LA ++ + + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-YK 275
+ QI G+ YLH + + H DLK N++L + ++ +KI DFGLA ++ +
Sbjct: 119 FLKQILNGVYYLHS---LQIAHFDLKPENIMLL----DRNVPKPRIKIIDFGLAHKIDFG 171
Query: 276 TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ GT ++APE++ +D+WS GV+ + LL+G P+
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +K+ DFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIKVADFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 299
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 115/262 (43%), Gaps = 39/262 (14%)
Query: 141 QEVAIKVAHPN--PDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
Q+VA+K+ + ++ +++E L L H +I+ L V ++ +V+EYA
Sbjct: 40 QKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE 99
Query: 199 PLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
+ ++ K+ + QI + Y H ++HRDLK N+LL E +
Sbjct: 100 LFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHL------ 150
Query: 259 FKTLKITDFGLAREVYKTTHM-SAAGTYAWMAPEVIKTSIFSKAS-DVWSYGVVLWELLT 316
+KI DFGL+ + + ++ G+ + APEVI +++ DVWS GV+L+ +L
Sbjct: 151 --NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 208
Query: 317 GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALN 376
+P+ + P LFK + + + P ++K +
Sbjct: 209 RRLPFDD--------------------ESIPVLFKNISNGVYTLPKFLSPGAAGLIKRM- 247
Query: 377 NIVHSEFIQTPHESFHIMQDGW 398
IV+ + HE IMQD W
Sbjct: 248 LIVNPLNRISIHE---IMQDDW 266
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 24/185 (12%)
Query: 143 VAIKVAHPNPDENILENVK-QEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLN 201
VAIK + D+ +++ + +E KLL H N+V+L+ VC + + LV E+ L+
Sbjct: 53 VAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILD 112
Query: 202 RV-LAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
+ L + V+ + QI G+ + H ++IHRD+K N+L+S Q
Sbjct: 113 DLELFPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVS--------QSG 161
Query: 261 TLKITDFGLAR------EVYKTTHMSAAGTYAWMAPEVIKTSI-FSKASDVWSYGVVLWE 313
+K+ DFG AR EVY T + APE++ + + KA DVW+ G ++ E
Sbjct: 162 VVKLCDFGFARTLAAPGEVYD----DEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTE 217
Query: 314 LLTGE 318
+ GE
Sbjct: 218 MFMGE 222
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 115/262 (43%), Gaps = 39/262 (14%)
Query: 141 QEVAIKVAHPN--PDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
Q+VA+K+ + ++ +++E L L H +I+ L V ++ +V+EYA
Sbjct: 30 QKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE 89
Query: 199 PLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
+ ++ K+ + QI + Y H ++HRDLK N+LL E +
Sbjct: 90 LFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHL------ 140
Query: 259 FKTLKITDFGLAREVYKTTHM-SAAGTYAWMAPEVIKTSIFSKAS-DVWSYGVVLWELLT 316
+KI DFGL+ + + ++ G+ + APEVI +++ DVWS GV+L+ +L
Sbjct: 141 --NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 198
Query: 317 GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALN 376
+P+ + P LFK + + + P ++K +
Sbjct: 199 RRLPFDD--------------------ESIPVLFKNISNGVYTLPKFLSPGAAGLIKRM- 237
Query: 377 NIVHSEFIQTPHESFHIMQDGW 398
IV+ + HE IMQD W
Sbjct: 238 LIVNPLNRISIHE---IMQDDW 256
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA--GRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++++ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 299
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA--GRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +K+ DFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIKVADFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 299
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 115/262 (43%), Gaps = 39/262 (14%)
Query: 141 QEVAIKVAHPN--PDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
Q+VA+K+ + ++ +++E L L H +I+ L V ++ +V+EYA
Sbjct: 39 QKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE 98
Query: 199 PLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
+ ++ K+ + QI + Y H ++HRDLK N+LL E +
Sbjct: 99 LFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHL------ 149
Query: 259 FKTLKITDFGLAREVYKTTHM-SAAGTYAWMAPEVIKTSIFSKAS-DVWSYGVVLWELLT 316
+KI DFGL+ + + ++ G+ + APEVI +++ DVWS GV+L+ +L
Sbjct: 150 --NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 207
Query: 317 GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALN 376
+P+ + P LFK + + + P ++K +
Sbjct: 208 RRLPFDD--------------------ESIPVLFKNISNGVYTLPKFLSPGAAGLIKRM- 246
Query: 377 NIVHSEFIQTPHESFHIMQDGW 398
IV+ + HE IMQD W
Sbjct: 247 LIVNPLNRISIHE---IMQDDW 265
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 17/157 (10%)
Query: 170 FDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAI---QIAEGM 225
DH NI+ L LVME RGG L + ++ +K VD A+ Q+ G
Sbjct: 61 LDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSE---VDAAVIMKQVLSGT 117
Query: 226 NYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAA-GT 284
YLH +++HRDLK N+LL + +KI DFGL+ M GT
Sbjct: 118 TYLHKH---NIVHRDLKPENLLLESKSRD-----ALIKIVDFGLSAHFEVGGKMKERLGT 169
Query: 285 YAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
++APEV++ + + DVWS GV+L+ LL G P+
Sbjct: 170 AYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPF 205
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 115/262 (43%), Gaps = 39/262 (14%)
Query: 141 QEVAIKVAHPN--PDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG 198
Q+VA+K+ + ++ +++E L L H +I+ L V ++ +V+EYA
Sbjct: 34 QKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE 93
Query: 199 PLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
+ ++ K+ + QI + Y H ++HRDLK N+LL E +
Sbjct: 94 LFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHL------ 144
Query: 259 FKTLKITDFGLAREVYKTTHM-SAAGTYAWMAPEVIKTSIFSKAS-DVWSYGVVLWELLT 316
+KI DFGL+ + + ++ G+ + APEVI +++ DVWS GV+L+ +L
Sbjct: 145 --NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 202
Query: 317 GEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALN 376
+P+ + P LFK + + + P ++K +
Sbjct: 203 RRLPFDD--------------------ESIPVLFKNISNGVYTLPKFLSPGAAGLIKRM- 241
Query: 377 NIVHSEFIQTPHESFHIMQDGW 398
IV+ + HE IMQD W
Sbjct: 242 LIVNPLNRISIHE---IMQDDW 260
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 23/218 (10%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAI-QIAEGMNYLHC 230
H+++V G + + +V+E R L + RK + + + QI G YLH
Sbjct: 80 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 139
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY--KTTHMSAAGTYAWM 288
+IHRDLK N+ L NEDL+ +KI DFGLA +V + GT ++
Sbjct: 140 N---RVIHRDLKLGNLFL-----NEDLE---VKIGDFGLATKVEYDGERKKTLCGTPNYI 188
Query: 289 APEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQ 348
APEV+ S DVWS G +++ LL G+ P+++ N+ + IP
Sbjct: 189 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS--IPKHINP 246
Query: 349 LFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
+ +L++ + D RP+ +N +++ EF +
Sbjct: 247 VAASLIQKMLQTDPTARPT-------INELLNDEFFTS 277
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 106/256 (41%), Gaps = 32/256 (12%)
Query: 133 VYKGIYEKQEVAIKVAHPNPDENIL-----ENVKQEGKLLWLFDHRNIVSLIGVCLQSPK 187
VYKG+ E ++VA + L + K+E + L H NIV + K
Sbjct: 42 VYKGL--DTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDSWESTVK 99
Query: 188 ----LCLVMEYARGGPLNRVLAGRKI-RPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLK 242
+ LV E G L L K+ + VL W QI +G+ +LH + P +IHRDLK
Sbjct: 100 GKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTP-PIIHRDLK 158
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSIFSKAS 302
N+ ++ P ++KI D GLA + + GT + APE + + ++
Sbjct: 159 CDNIFITGPT-------GSVKIGDLGLATLKRASFAKAVIGTPEFXAPEXYEEK-YDESV 210
Query: 303 DVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKL------TLPIPSTCPQLFKTLMEA 356
DV+++G E T E PY + + + IP K ++E
Sbjct: 211 DVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEV-----KEIIEG 265
Query: 357 CWEADSHMRPSFKTIL 372
C + R S K +L
Sbjct: 266 CIRQNKDERYSIKDLL 281
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 188 LCLVMEYARGGPLNRVLA--GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSN 245
L +V+EYA GG + L GR P +A QI YLH + LI+RDLK N
Sbjct: 117 LYMVLEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKPEN 172
Query: 246 VLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVW 305
+L+ Q +K+ DFG A+ V K GT ++APE+I + ++KA D W
Sbjct: 173 LLID--------QQGYIKVADFGFAKRV-KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 306 SYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMR 365
+ GV+++E+ G P+ + K+ PS K L+ + D R
Sbjct: 224 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PSHFSSDLKDLLRNLLQVDLTKR 281
Query: 366 PSFKTILKALNNIVHSEFIQT 386
F + +N+I + ++ T
Sbjct: 282 --FGNLKNGVNDIKNHKWFAT 300
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 23/218 (10%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAI-QIAEGMNYLHC 230
H+++V G + + +V+E R L + RK + + + QI G YLH
Sbjct: 76 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 135
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY--KTTHMSAAGTYAWM 288
+IHRDLK N+ L NEDL+ +KI DFGLA +V + GT ++
Sbjct: 136 N---RVIHRDLKLGNLFL-----NEDLE---VKIGDFGLATKVEYDGERKKTLCGTPNYI 184
Query: 289 APEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQ 348
APEV+ S DVWS G +++ LL G+ P+++ N+ + IP
Sbjct: 185 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS--IPKHINP 242
Query: 349 LFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
+ +L++ + D RP+ +N +++ EF +
Sbjct: 243 VAASLIQKMLQTDPTARPT-------INELLNDEFFTS 273
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 136
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 137 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTA 183
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 12/171 (7%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L + + ++A ++Y H
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + + GT ++ P
Sbjct: 131 K---RVIHRDIKPENLLLGSNGE--------LKIADFGWSVHAPSSRRTTLCGTLDYLPP 179
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP 341
E+I+ + + D+WS GV+ +E L G P+++ + T P
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFP 230
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 136
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 137 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTA 183
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 136
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 137 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTA 183
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 28/206 (13%)
Query: 178 LIGV--CLQS-PKLCLVMEYARGGPLN-RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAP 233
L+G+ C Q+ +L V+EY GG L + RK+ + ++ +I+ +NYLH +
Sbjct: 83 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG- 141
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK--TTHMSAAGTYAWMAPE 291
+I+RDLK NVLL +K+TD+G+ +E + T GT ++APE
Sbjct: 142 --IIYRDLKLDNVLLDSE--------GHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE 191
Query: 292 VIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFK 351
+++ + + D W+ GV+++E++ G P+ + P +T LF+
Sbjct: 192 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN-----------PDQNTEDYLFQ 240
Query: 352 TLMEACWEADSHMRPSFKTILKALNN 377
++E M ++LK+ N
Sbjct: 241 VILEKQIRIPRSMSVKAASVLKSFLN 266
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 23/218 (10%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAI-QIAEGMNYLHC 230
H+++V G + + +V+E R L + RK + + + QI G YLH
Sbjct: 76 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 135
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY--KTTHMSAAGTYAWM 288
+IHRDLK N+ L NEDL+ +KI DFGLA +V + GT ++
Sbjct: 136 N---RVIHRDLKLGNLFL-----NEDLE---VKIGDFGLATKVEYDGERKKTLCGTPNYI 184
Query: 289 APEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQ 348
APEV+ S DVWS G +++ LL G+ P+++ N+ + IP
Sbjct: 185 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS--IPKHINP 242
Query: 349 LFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
+ +L++ + D RP+ +N +++ EF +
Sbjct: 243 VAASLIQKMLQTDPTARPT-------INELLNDEFFTS 273
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 23/218 (10%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAI-QIAEGMNYLHC 230
H+++V G + + +V+E R L + RK + + + QI G YLH
Sbjct: 100 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 159
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-YKTTHMSA-AGTYAWM 288
+IHRDLK N+ L NEDL+ +KI DFGLA +V Y GT ++
Sbjct: 160 N---RVIHRDLKLGNLFL-----NEDLE---VKIGDFGLATKVEYDGERKKVLCGTPNYI 208
Query: 289 APEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQ 348
APEV+ S DVWS G +++ LL G+ P+++ N+ + IP
Sbjct: 209 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS--IPKHINP 266
Query: 349 LFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
+ +L++ + D RP+ +N +++ EF +
Sbjct: 267 VAASLIQKMLQTDPTARPT-------INELLNDEFFTS 297
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 23/218 (10%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAI-QIAEGMNYLHC 230
H+++V G + + +V+E R L + RK + + + QI G YLH
Sbjct: 98 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 157
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-YKTTHMSA-AGTYAWM 288
+IHRDLK N+ L NEDL+ +KI DFGLA +V Y GT ++
Sbjct: 158 N---RVIHRDLKLGNLFL-----NEDLE---VKIGDFGLATKVEYDGERKKVLCGTPNYI 206
Query: 289 APEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQ 348
APEV+ S DVWS G +++ LL G+ P+++ N+ + IP
Sbjct: 207 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS--IPKHINP 264
Query: 349 LFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
+ +L++ + D RP+ +N +++ EF +
Sbjct: 265 VAASLIQKMLQTDPTARPT-------INELLNDEFFTS 295
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 135
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 136 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 182
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 183 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF 129
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 176
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVD 216
E++++E +L H N+++L V + L+ E GG L LA ++ + + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATE 118
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-YK 275
+ QI G+ YLH + + H DLK N++L + ++ +KI DFGLA ++ +
Sbjct: 119 FLKQILNGVYYLHS---LQIAHFDLKPENIMLL----DRNVPKPRIKIIDFGLAHKIDFG 171
Query: 276 TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ GT ++APE++ +D+WS GV+ + LL+G P+
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 176
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 177 DEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 135
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 136 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 182
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 183 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 176
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 16/158 (10%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK--IRPDVLVDWAIQIAEGMNYLH 229
H +V L + KL V++Y GG L L + + P +A +IA + YLH
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLH 156
Query: 230 CQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE--VYKTTHMSAAGTYAW 287
+++++RDLK N+LL D Q + +TDFGL +E + +T + GT +
Sbjct: 157 S---LNIVYRDLKPENILL-------DSQ-GHIVLTDFGLCKENIEHNSTTSTFCGTPEY 205
Query: 288 MAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSIN 325
+APEV+ + + D W G VL+E+L G P+ S N
Sbjct: 206 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN 243
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF 129
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXE--------LKILDFGLAR--HTD 176
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 176
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 80 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 139
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 140 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 186
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 187 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 229
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 136
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 137 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 183
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA--GRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT +APE+I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 299
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 134
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 135 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 181
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 182 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 24/165 (14%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLARH---- 174
Query: 277 THMSAAGTYA---WMAPEVIKTSI-FSKASDVWSYGVVLWELLTG 317
T AG A + APE++ + +++ D+WS G ++ ELLTG
Sbjct: 175 TDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 69 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 128
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 129 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 175
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 176 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 218
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 17/157 (10%)
Query: 170 FDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAI---QIAEGM 225
DH NI+ L LVME RGG L + ++ +K VD A+ Q+ G
Sbjct: 78 LDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSE---VDAAVIMKQVLSGT 134
Query: 226 NYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGT 284
YLH +++HRDLK N+LL + +KI DFGL+ M GT
Sbjct: 135 TYLHKH---NIVHRDLKPENLLLESKSRDA-----LIKIVDFGLSAHFEVGGKMKERLGT 186
Query: 285 YAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
++APEV++ + + DVWS GV+L+ LL G P+
Sbjct: 187 AYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPF 222
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 24/165 (14%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLARH---- 174
Query: 277 THMSAAGTYA---WMAPEVIKTSI-FSKASDVWSYGVVLWELLTG 317
T AG A + APE++ + +++ D+WS G ++ ELLTG
Sbjct: 175 TDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 135
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 136 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 182
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 183 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 176
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 23/218 (10%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAI-QIAEGMNYLHC 230
H+++V G + + +V+E R L + RK + + + QI G YLH
Sbjct: 74 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 133
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-YKTTHMSA-AGTYAWM 288
+IHRDLK N+ L NEDL+ +KI DFGLA +V Y GT ++
Sbjct: 134 N---RVIHRDLKLGNLFL-----NEDLE---VKIGDFGLATKVEYDGERKKVLCGTPNYI 182
Query: 289 APEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQ 348
APEV+ S DVWS G +++ LL G+ P+++ N+ + IP
Sbjct: 183 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS--IPKHINP 240
Query: 349 LFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
+ +L++ + D RP+ +N +++ EF +
Sbjct: 241 VAASLIQKMLQTDPTARPT-------INELLNDEFFTS 271
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 176
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 176
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 82/150 (54%), Gaps = 17/150 (11%)
Query: 178 LIGV--CLQS-PKLCLVMEYARGGPLN-RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAP 233
L+G+ C Q+ +L V+EY GG L + RK+ + ++ +I+ +NYLH +
Sbjct: 115 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG- 173
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK--TTHMSAAGTYAWMAPE 291
+I+RDLK NVLL +K+TD+G+ +E + T + GT ++APE
Sbjct: 174 --IIYRDLKLDNVLLDSE--------GHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPE 223
Query: 292 VIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+++ + + D W+ GV+++E++ G P+
Sbjct: 224 ILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 12/177 (6%)
Query: 152 PDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGR--KI 209
P E+ E V++E + + + H +V+L ++ ++ E+ GG L +A K+
Sbjct: 87 PHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKM 146
Query: 210 RPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGL 269
D V++ Q+ +G+ ++H + +H DLK N++ + NE LK+ DFGL
Sbjct: 147 SEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNE------LKLIDFGL 197
Query: 270 AREVY-KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSIN 325
+ K + GT + APEV + +D+WS GV+ + LL+G P+ N
Sbjct: 198 TAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN 254
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 140
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 141 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 187
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 188 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 176
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 131
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 132 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 178
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 179 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 176
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 24/165 (14%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 125
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR
Sbjct: 126 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLARH---- 170
Query: 277 THMSAAGTYA---WMAPEVIKTSI-FSKASDVWSYGVVLWELLTG 317
T AG A + APE++ + +++ D+WS G ++ ELLTG
Sbjct: 171 TDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 131
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 132 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 178
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 179 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 148
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 149 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 195
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 196 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 134
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 135 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 181
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 182 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 131
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 132 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 178
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 179 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 149
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 150 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 196
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 197 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 125
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 126 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 172
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 148
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 149 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 195
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 196 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 141
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 142 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 188
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 189 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 141
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 142 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 188
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 189 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 134
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 135 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXE--------LKILDFGLAR--HTD 181
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 182 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 134
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 135 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXE--------LKILDFGLAR--HTD 181
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 182 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 103/232 (44%), Gaps = 19/232 (8%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVL 214
+E+ E ++L + +V L + L +VMEY GG + L GR P
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+A QI YLH + LI+RDLK N+L+ Q +++TDFG A+ V
Sbjct: 145 F-YAAQIVLTFEYLHS---LDLIYRDLKPENLLID--------QQGYIQVTDFGFAKRV- 191
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
K GT ++AP +I + ++KA D W+ GV+++E+ G P+ +
Sbjct: 192 KGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251
Query: 335 XNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
K+ PS K L+ + D R F + +N+I + ++ T
Sbjct: 252 SGKVRF--PSHFSSDLKDLLRNLLQVDLTKR--FGNLKNGVNDIKNHKWFAT 299
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 141
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 142 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 188
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 189 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 126
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 127 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 173
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 174 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 149
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 150 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 196
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 197 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 18/162 (11%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 149
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR
Sbjct: 150 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLARHT-DD 197
Query: 277 THMSAAGTYAWMAPEVIKTSI-FSKASDVWSYGVVLWELLTG 317
T + APE++ + +++ D+WS G ++ ELLTG
Sbjct: 198 EMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 140
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 141 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXE--------LKILDFGLAR--HTD 187
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 188 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 152
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 153 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 199
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 200 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 126
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 127 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 173
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 174 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 176
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 125
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 126 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 172
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 68 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 127
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 128 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 174
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 175 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 217
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 99 RELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 158
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 159 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 205
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + ++ D+WS G ++ ELLTG
Sbjct: 206 DEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTG 248
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 31/204 (15%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCL----QSPK 187
+V++G++ + VA+K+ +++ + +L H NI+ I + S +
Sbjct: 23 EVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVL--LRHDNILGFIASDMTSRNSSTQ 80
Query: 188 LCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHC-----QAPISLIHRDLK 242
L L+ Y G L L + + P + + A+ A G+ +LH Q ++ HRD K
Sbjct: 81 LWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFK 140
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLA------REVYKTTHMSAAGTYAWMAPEV---- 292
S NVL+ ++ I D GLA + + GT +MAPEV
Sbjct: 141 SRNVLVKSNLQ--------CCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQ 192
Query: 293 IKTSIFS--KASDVWSYGVVLWEL 314
I+T F K +D+W++G+VLWE+
Sbjct: 193 IRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 18/162 (11%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 152
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR
Sbjct: 153 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLARHT-DD 200
Query: 277 THMSAAGTYAWMAPEVIKTSI-FSKASDVWSYGVVLWELLTG 317
T + APE++ + +++ D+WS G ++ ELLTG
Sbjct: 201 EMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 12/171 (7%)
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-RKIRPDVLVDWAIQIAEGMNYLHC 230
H NI+ L G + ++ L++EYA G + R L + + ++A ++Y H
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
+ +IHRD+K N+LL E LKI DFG + + + GT ++ P
Sbjct: 131 K---RVIHRDIKPENLLLGSNGE--------LKIADFGWSVHAPSSRRDTLCGTLDYLPP 179
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLP 341
E+I+ + + D+WS GV+ +E L G P+++ + T P
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFP 230
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 135
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 136 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSE--------LKILDFGLAR--HTD 182
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 183 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 131
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 132 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSE--------LKILDFGLAR--HTD 178
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 179 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 12/177 (6%)
Query: 152 PDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGR--KI 209
P E+ E V++E + + + H +V+L ++ ++ E+ GG L +A K+
Sbjct: 193 PHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKM 252
Query: 210 RPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGL 269
D V++ Q+ +G+ ++H + +H DLK N++ + NE LK+ DFGL
Sbjct: 253 SEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNE------LKLIDFGL 303
Query: 270 AREVY-KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSIN 325
+ K + GT + APEV + +D+WS GV+ + LL+G P+ N
Sbjct: 304 TAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN 360
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 81/150 (54%), Gaps = 17/150 (11%)
Query: 178 LIGV--CLQS-PKLCLVMEYARGGPLN-RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAP 233
L+G+ C Q+ +L V+EY GG L + RK+ + ++ +I+ +NYLH +
Sbjct: 68 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG- 126
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK--TTHMSAAGTYAWMAPE 291
+I+RDLK NVLL +K+TD+G+ +E + T GT ++APE
Sbjct: 127 --IIYRDLKLDNVLLDSE--------GHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE 176
Query: 292 VIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+++ + + D W+ GV+++E++ G P+
Sbjct: 177 ILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 83/154 (53%), Gaps = 17/154 (11%)
Query: 178 LIGV--CLQS-PKLCLVMEYARGGPLN-RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAP 233
L+G+ C Q+ +L V+EY GG L + RK+ + ++ +I+ +NYLH +
Sbjct: 72 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG- 130
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA--AGTYAWMAPE 291
+I+RDLK NVLL +K+TD+G+ +E + ++ GT ++APE
Sbjct: 131 --IIYRDLKLDNVLLDSE--------GHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE 180
Query: 292 VIKTSIFSKASDVWSYGVVLWELLTGEIPYKSIN 325
+++ + + D W+ GV+++E++ G P+ +
Sbjct: 181 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG 214
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 84/164 (51%), Gaps = 15/164 (9%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDV-LVDWAI 219
E ++L + R +VSL LCLV+ GG L + G+ P+ V +A
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
+I G+ LH + +++RDLK N+LL + ++I+D GLA V + +
Sbjct: 294 EICCGLEDLHRE---RIVYRDLKPENILLDD--------HGHIRISDLGLAVHVPEGQTI 342
Query: 280 SA-AGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYK 322
GT +MAPEV+K ++ + D W+ G +L+E++ G+ P++
Sbjct: 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 21/187 (11%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEYA 195
K VAIK P + + +E ++L F H N++ + + L++ + +++
Sbjct: 68 KTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDL 127
Query: 196 RGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L ++L +++ D + + QI G+ Y+H +++HRDLK SN+L++ +
Sbjct: 128 METDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLINTTCD-- 182
Query: 256 DLQFKTLKITDFGLAR----EVYKTTHMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGV 309
LKI DFGLAR E T ++ W APE++ S ++K+ D+WS G
Sbjct: 183 ------LKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGC 236
Query: 310 VLWELLT 316
+L E+L+
Sbjct: 237 ILAEMLS 243
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 171 DHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLH 229
+H + + L VMEY GG L + + K +A +I G+ +LH
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH 136
Query: 230 CQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE--VYKTTHMSAAGTYAW 287
+ +++RDLK N+LL + +KI DFG+ +E + GT +
Sbjct: 137 SKG---IVYRDLKLDNILLDKD--------GHIKIADFGMCKENMLGDAKTNEFCGTPDY 185
Query: 288 MAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+APE++ ++ + D WS+GV+L+E+L G+ P+
Sbjct: 186 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI D+GLAR +
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDYGLAR--HTD 176
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ K+ D +
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQF 125
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGLAR +
Sbjct: 126 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFGLAR--HTD 172
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEYA 195
K VAIK P + + +E K+L F H NI+ + + ++ K +++
Sbjct: 52 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 111
Query: 196 RGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L ++L + + D + + QI G+ Y+H +++HRDLK SN+LL+ +
Sbjct: 112 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD-- 166
Query: 256 DLQFKTLKITDFGLAREVYKTTH------MSAAGTYAWMAPEVIKTSI-FSKASDVWSYG 308
LKI DFGLAR V H T + APE++ S ++K+ D+WS G
Sbjct: 167 ------LKICDFGLAR-VADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 309 VVLWELLTG 317
+L E+L+
Sbjct: 220 CILAEMLSN 228
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEYA 195
K VAIK P + + +E K+L F H NI+ + + ++ K +++
Sbjct: 53 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 112
Query: 196 RGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L ++L + + D + + QI G+ Y+H +++HRDLK SN+LL+ +
Sbjct: 113 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD-- 167
Query: 256 DLQFKTLKITDFGLAREVYKTTH------MSAAGTYAWMAPEVIKTSI-FSKASDVWSYG 308
LKI DFGLAR V H T + APE++ S ++K+ D+WS G
Sbjct: 168 ------LKICDFGLAR-VADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVG 220
Query: 309 VVLWELLTG 317
+L E+L+
Sbjct: 221 CILAEMLSN 229
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEYA 195
K VAIK P + + +E K+L F H NI+ + + ++ K +++
Sbjct: 48 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 107
Query: 196 RGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L ++L + + D + + QI G+ Y+H +++HRDLK SN+LL+ +
Sbjct: 108 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD-- 162
Query: 256 DLQFKTLKITDFGLAREVYKTTH------MSAAGTYAWMAPEVIKTSI-FSKASDVWSYG 308
LKI DFGLAR V H T + APE++ S ++K+ D+WS G
Sbjct: 163 ------LKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 309 VVLWELLTG 317
+L E+L+
Sbjct: 216 CILAEMLSN 224
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 31/161 (19%)
Query: 229 HCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAW 287
H + + +IHRD+K SN+LL +K+ DFG++ ++ + + AG +
Sbjct: 140 HLKENLKIIHRDIKPSNILLDRS--------GNIKLCDFGISGQLVDSIAKTRDAGCRPY 191
Query: 288 MAPEVIKTSI----FSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIP 343
MAPE I S + SDVWS G+ L+EL TG PY N ++LT +
Sbjct: 192 MAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWN-------SVFDQLTQVVK 244
Query: 344 STCPQL-----------FKTLMEACWEADSHMRPSFKTILK 373
PQL F + C D RP +K +LK
Sbjct: 245 GDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEYA 195
K VAIK P + + +E K+L F H NI+ + + ++ K +++
Sbjct: 50 KVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDL 109
Query: 196 RGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L ++L + + D + + QI G+ Y+H +++HRDLK SN+LL+ +
Sbjct: 110 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD-- 164
Query: 256 DLQFKTLKITDFGLAREVYKTTH------MSAAGTYAWMAPEVIKTSI-FSKASDVWSYG 308
LKI DFGLAR V H T + APE++ S ++K+ D+WS G
Sbjct: 165 ------LKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 217
Query: 309 VVLWELLTG 317
+L E+L+
Sbjct: 218 CILAEMLSN 226
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEYA 195
K VAIK P + + +E K+L F H NI+ + + ++ K +++
Sbjct: 50 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 109
Query: 196 RGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L ++L + + D + + QI G+ Y+H +++HRDLK SN+LL+ +
Sbjct: 110 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD-- 164
Query: 256 DLQFKTLKITDFGLAREVYKTTH------MSAAGTYAWMAPEVIKTSI-FSKASDVWSYG 308
LKI DFGLAR V H T + APE++ S ++K+ D+WS G
Sbjct: 165 ------LKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 217
Query: 309 VVLWELLTG 317
+L E+L+
Sbjct: 218 CILAEMLSN 226
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 84/164 (51%), Gaps = 15/164 (9%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDV-LVDWAI 219
E ++L + R +VSL LCLV+ GG L + G+ P+ V +A
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
+I G+ LH + +++RDLK N+LL + ++I+D GLA V + +
Sbjct: 294 EICCGLEDLHRE---RIVYRDLKPENILLDD--------HGHIRISDLGLAVHVPEGQTI 342
Query: 280 SA-AGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYK 322
GT +MAPEV+K ++ + D W+ G +L+E++ G+ P++
Sbjct: 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 14/137 (10%)
Query: 188 LCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNV 246
L VMEY GG L + + K +A +I G+ +LH + +++RDLK N+
Sbjct: 93 LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNI 149
Query: 247 LLSEPIENEDLQFKTLKITDFGLARE--VYKTTHMSAAGTYAWMAPEVIKTSIFSKASDV 304
LL + +KI DFG+ +E + GT ++APE++ ++ + D
Sbjct: 150 LLDKD--------GHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDW 201
Query: 305 WSYGVVLWELLTGEIPY 321
WS+GV+L+E+L G+ P+
Sbjct: 202 WSFGVLLYEMLIGQSPF 218
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEYA 195
K VAIK P + + +E K+L F H NI+ + + ++ K +++
Sbjct: 48 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 107
Query: 196 RGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L ++L + + D + + QI G+ Y+H +++HRDLK SN+LL+ +
Sbjct: 108 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXD-- 162
Query: 256 DLQFKTLKITDFGLAREVYKTTH------MSAAGTYAWMAPEVIKTSI-FSKASDVWSYG 308
LKI DFGLAR V H T + APE++ S ++K+ D+WS G
Sbjct: 163 ------LKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 309 VVLWELLTG 317
+L E+L+
Sbjct: 216 CILAEMLSN 224
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEYA 195
K VAIK P + + +E K+L F H NI+ + + ++ K +++
Sbjct: 46 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 105
Query: 196 RGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L ++L + + D + + QI G+ Y+H +++HRDLK SN+LL+ +
Sbjct: 106 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD-- 160
Query: 256 DLQFKTLKITDFGLAREVYKTTH------MSAAGTYAWMAPEVIKTSI-FSKASDVWSYG 308
LKI DFGLAR V H T + APE++ S ++K+ D+WS G
Sbjct: 161 ------LKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 213
Query: 309 VVLWELLTG 317
+L E+L+
Sbjct: 214 CILAEMLSN 222
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 12/151 (7%)
Query: 175 IVSLIGVCLQSPKLCLVMEYARGGPLNRVLA---GRKIRPDVLVDWAIQIAEGMNYLHCQ 231
+++L V + ++ L++EYA GG + + + + ++ QI EG+ YLH
Sbjct: 91 VINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN 150
Query: 232 APISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM-SAAGTYAWMAP 290
+++H DLK N+LLS D+ KI DFG++R++ + GT ++AP
Sbjct: 151 ---NIVHLDLKPQNILLSSIYPLGDI-----KIVDFGMSRKIGHACELREIMGTPEYLAP 202
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
E++ + A+D+W+ G++ + LLT P+
Sbjct: 203 EILNYDPITTATDMWNIGIIAYMLLTHTSPF 233
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEYA 195
K VAIK P + + +E K+L F H NI+ + + ++ K +++
Sbjct: 46 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 105
Query: 196 RGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L ++L + + D + + QI G+ Y+H +++HRDLK SN+LL+ +
Sbjct: 106 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD-- 160
Query: 256 DLQFKTLKITDFGLAREVYKTTH------MSAAGTYAWMAPEVIKTSI-FSKASDVWSYG 308
LKI DFGLAR V H T + APE++ S ++K+ D+WS G
Sbjct: 161 ------LKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 213
Query: 309 VVLWELLTG 317
+L E+L+
Sbjct: 214 CILAEMLSN 222
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEYA 195
K VAIK P + + +E K+L F H NI+ + + ++ K +++
Sbjct: 53 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 112
Query: 196 RGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L ++L + + D + + QI G+ Y+H +++HRDLK SN+LL+ +
Sbjct: 113 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD-- 167
Query: 256 DLQFKTLKITDFGLAREVYKTTH------MSAAGTYAWMAPEVIKTSI-FSKASDVWSYG 308
LKI DFGLAR V H T + APE++ S ++K+ D+WS G
Sbjct: 168 ------LKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 220
Query: 309 VVLWELLTG 317
+L E+L+
Sbjct: 221 CILAEMLSN 229
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEYA 195
K VAIK P + + +E K+L F H NI+ + + ++ K +++
Sbjct: 48 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 107
Query: 196 RGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L ++L + + D + + QI G+ Y+H +++HRDLK SN+LL+ +
Sbjct: 108 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXD-- 162
Query: 256 DLQFKTLKITDFGLAREVYKTTH------MSAAGTYAWMAPEVIKTSI-FSKASDVWSYG 308
LKI DFGLAR V H T + APE++ S ++K+ D+WS G
Sbjct: 163 ------LKIXDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 309 VVLWELLTG 317
+L E+L+
Sbjct: 216 CILAEMLSN 224
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEYA 195
K VAIK P + + +E K+L F H NI+ + + ++ K +++
Sbjct: 54 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 113
Query: 196 RGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L ++L + + D + + QI G+ Y+H +++HRDLK SN+LL+ +
Sbjct: 114 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD-- 168
Query: 256 DLQFKTLKITDFGLAREVYKTTH------MSAAGTYAWMAPEVIKTSI-FSKASDVWSYG 308
LKI DFGLAR V H T + APE++ S ++K+ D+WS G
Sbjct: 169 ------LKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 221
Query: 309 VVLWELLTG 317
+L E+L+
Sbjct: 222 CILAEMLSN 230
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEYA 195
K VAIK P + + +E K+L F H NI+ + + ++ K +++
Sbjct: 45 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 104
Query: 196 RGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L ++L + + D + + QI G+ Y+H +++HRDLK SN+LL+ +
Sbjct: 105 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD-- 159
Query: 256 DLQFKTLKITDFGLAREVYKTTH------MSAAGTYAWMAPEVIKTSI-FSKASDVWSYG 308
LKI DFGLAR V H T + APE++ S ++K+ D+WS G
Sbjct: 160 ------LKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 212
Query: 309 VVLWELLTG 317
+L E+L+
Sbjct: 213 CILAEMLSN 221
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEYA 195
K VAIK P + + +E K+L F H NI+ + + ++ K +++
Sbjct: 52 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 111
Query: 196 RGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L ++L + + D + + QI G+ Y+H +++HRDLK SN+LL+ +
Sbjct: 112 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD-- 166
Query: 256 DLQFKTLKITDFGLAREVYKTTH------MSAAGTYAWMAPEVIKTSI-FSKASDVWSYG 308
LKI DFGLAR V H T + APE++ S ++K+ D+WS G
Sbjct: 167 ------LKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 309 VVLWELLTG 317
+L E+L+
Sbjct: 220 CILAEMLSN 228
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEYA 195
K VAIK P + + +E K+L F H NI+ + + ++ K +++
Sbjct: 48 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 107
Query: 196 RGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L ++L + + D + + QI G+ Y+H +++HRDLK SN+LL+ +
Sbjct: 108 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXD-- 162
Query: 256 DLQFKTLKITDFGLAREVYKTTH------MSAAGTYAWMAPEVIKTSI-FSKASDVWSYG 308
LKI DFGLAR V H T + APE++ S ++K+ D+WS G
Sbjct: 163 ------LKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 309 VVLWELLTG 317
+L E+L+
Sbjct: 216 CILAEMLSN 224
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEYA 195
K VAIK P + + +E K+L F H NI+ + + ++ K +++
Sbjct: 68 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 127
Query: 196 RGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L ++L + + D + + QI G+ Y+H +++HRDLK SN+LL+ +
Sbjct: 128 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD-- 182
Query: 256 DLQFKTLKITDFGLAREVYKTTH------MSAAGTYAWMAPEVIKTSI-FSKASDVWSYG 308
LKI DFGLAR V H T + APE++ S ++K+ D+WS G
Sbjct: 183 ------LKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 235
Query: 309 VVLWELLTG 317
+L E+L+
Sbjct: 236 CILAEMLSN 244
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEYA 195
K VAIK P + + +E K+L F H NI+ + + ++ K +++
Sbjct: 52 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 111
Query: 196 RGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L ++L + + D + + QI G+ Y+H +++HRDLK SN+LL+ +
Sbjct: 112 METDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD-- 166
Query: 256 DLQFKTLKITDFGLAREVYKTTH------MSAAGTYAWMAPEVIKTSI-FSKASDVWSYG 308
LKI DFGLAR V H T + APE++ S ++K+ D+WS G
Sbjct: 167 ------LKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 309 VVLWELLTG 317
+L E+L+
Sbjct: 220 CILAEMLSN 228
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEYA 195
K VAIK P + + +E K+L F H NI+ + + ++ K +++
Sbjct: 56 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 115
Query: 196 RGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L ++L + + D + + QI G+ Y+H +++HRDLK SN+LL+ +
Sbjct: 116 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD-- 170
Query: 256 DLQFKTLKITDFGLAREVYKTTH------MSAAGTYAWMAPEVIKTSI-FSKASDVWSYG 308
LKI DFGLAR V H T + APE++ S ++K+ D+WS G
Sbjct: 171 ------LKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 223
Query: 309 VVLWELLTG 317
+L E+L+
Sbjct: 224 CILAEMLSN 232
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEYA 195
K VAIK P + + +E K+L F H NI+ + + ++ K +++
Sbjct: 48 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 107
Query: 196 RGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L ++L + + D + + QI G+ Y+H +++HRDLK SN+LL+ +
Sbjct: 108 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD-- 162
Query: 256 DLQFKTLKITDFGLAREVYKTTH------MSAAGTYAWMAPEVIKTSI-FSKASDVWSYG 308
LKI DFGLAR V H T + APE++ S ++K+ D+WS G
Sbjct: 163 ------LKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 309 VVLWELLTG 317
+L E+L+
Sbjct: 216 CILAEMLSN 224
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQF 129
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DFGL R +
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSE--------LKILDFGLCR--HTD 176
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEYA 195
K VAIK P + + +E K+L F H NI+ + + ++ K +++
Sbjct: 52 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 111
Query: 196 RGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L ++L + + D + + QI G+ Y+H +++HRDLK SN+LL+ +
Sbjct: 112 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXD-- 166
Query: 256 DLQFKTLKITDFGLAREVYKTTH------MSAAGTYAWMAPEVIKTSI-FSKASDVWSYG 308
LKI DFGLAR V H T + APE++ S ++K+ D+WS G
Sbjct: 167 ------LKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 309 VVLWELLTG 317
+L E+L+
Sbjct: 220 CILAEMLSN 228
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEYA 195
K VAIK P + + +E K+L F H NI+ + + ++ K +++
Sbjct: 52 KVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 111
Query: 196 RGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L ++L + + D + + QI G+ Y+H +++HRDLK SN+LL+ +
Sbjct: 112 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXD-- 166
Query: 256 DLQFKTLKITDFGLAREVYKTTH------MSAAGTYAWMAPEVIKTSI-FSKASDVWSYG 308
LKI DFGLAR V H T + APE++ S ++K+ D+WS G
Sbjct: 167 ------LKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 309 VVLWELLTG 317
+L E+L+
Sbjct: 220 CILAEMLSN 228
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 23/199 (11%)
Query: 135 KGIYEKQEVAIKV--AHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKL 188
+ + + ++VA+KV A D + ++E + +H IV++ P
Sbjct: 32 RDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91
Query: 189 CLVMEYARGGPLNRVLAGRK-IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+VMEY G L ++ + P ++ + +N+ H +IHRD+K +N+L
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIL 148
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTH---MSAA--GTYAWMAPEVIKTSIFSKAS 302
+S +K+ DFG+AR + + + +AA GT +++PE + S
Sbjct: 149 IS--------ATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 303 DVWSYGVVLWELLTGEIPY 321
DV+S G VL+E+LTGE P+
Sbjct: 201 DVYSLGCVLYEVLTGEPPF 219
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 24/192 (12%)
Query: 141 QEVAIK-VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL------CLVME 193
++VAIK ++ P E + +E LL H N++ L+ V + L LVM
Sbjct: 50 EKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP 109
Query: 194 YARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
+ + L +++ G K + + Q+ +G+ Y+H ++HRDLK N+ ++E E
Sbjct: 110 FMQTD-LQKIM-GLKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCE 164
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVL 311
LKI DFGLAR + M+ W APEVI + + +++ D+WS G ++
Sbjct: 165 --------LKILDFGLAR--HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIM 214
Query: 312 WELLTGEIPYKS 323
E+LTG+ +K
Sbjct: 215 AEMLTGKTLFKG 226
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEYA 195
K VAIK P + + +E K+L F H NI+ + + ++ K +++
Sbjct: 50 KVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDL 109
Query: 196 RGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L ++L + + D + + QI G+ Y+H +++HRDLK SN+LL+ +
Sbjct: 110 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTSD-- 164
Query: 256 DLQFKTLKITDFGLAREVYKTTH------MSAAGTYAWMAPEVIKTSI-FSKASDVWSYG 308
LKI DFGLAR V H T + APE++ S ++K+ D+WS G
Sbjct: 165 ------LKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 217
Query: 309 VVLWELLTG 317
+L E+L+
Sbjct: 218 CILAEMLSN 226
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 95/185 (51%), Gaps = 20/185 (10%)
Query: 187 KLCLVMEYARGGPLNRVLAGRKIRPDV-LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSN 245
KL +++ GG L+ L+ + + + +A +I G+ ++H + +++RDLK +N
Sbjct: 265 KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPAN 321
Query: 246 VLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSI-FSKASDV 304
+LL E ++I+D GLA + K ++ GT+ +MAPEV++ + + ++D
Sbjct: 322 ILLDE--------HGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADW 373
Query: 305 WSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF----KTLMEACWEA 360
+S G +L++LL G P++ +++TL + P F ++L+E +
Sbjct: 374 FSLGCMLFKLLRGHSPFRQ---HKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR 430
Query: 361 DSHMR 365
D + R
Sbjct: 431 DVNRR 435
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 95/185 (51%), Gaps = 20/185 (10%)
Query: 187 KLCLVMEYARGGPLNRVLAGRKIRPDV-LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSN 245
KL +++ GG L+ L+ + + + +A +I G+ ++H + +++RDLK +N
Sbjct: 266 KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPAN 322
Query: 246 VLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSI-FSKASDV 304
+LL E ++I+D GLA + K ++ GT+ +MAPEV++ + + ++D
Sbjct: 323 ILLDE--------HGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADW 374
Query: 305 WSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF----KTLMEACWEA 360
+S G +L++LL G P++ +++TL + P F ++L+E +
Sbjct: 375 FSLGCMLFKLLRGHSPFRQ---HKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR 431
Query: 361 DSHMR 365
D + R
Sbjct: 432 DVNRR 436
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 113/273 (41%), Gaps = 25/273 (9%)
Query: 114 IDYNKLXXXXXXXXXXXXKVYKGIYEKQEVAIKVAHPNP-DENILENVKQEGKLLWLFDH 172
ID+ +L +++KG ++ ++ +KV + +E L +F H
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 173 RNIVSLIGVCLQ--SPKLCLVMEYARGGPLNRVL-AGRKIRPDV--LVDWAIQIAEGMNY 227
N++ ++G C +P L+ + G L VL G D V +A+ A G +
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAF 126
Query: 228 LHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYA- 286
LH P+ H L S +V + E T +I+ + K + S YA
Sbjct: 127 LHTLEPLIPRHA-LNSRSVXIDED--------XTARISXADV-----KFSFQSPGRXYAP 172
Query: 287 -WMAPEVIKT---SIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPI 342
W+APE ++ +++D WS+ V+LWEL+T E+P+ ++ L I
Sbjct: 173 AWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTI 232
Query: 343 PSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
P L + C D RP F I+ L
Sbjct: 233 PPGISPHVSKLXKICXNEDPAKRPKFDXIVPIL 265
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 23/199 (11%)
Query: 135 KGIYEKQEVAIKV--AHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKL 188
+ + + ++VA+KV A D + ++E + +H IV++ P
Sbjct: 32 RDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91
Query: 189 CLVMEYARGGPLNRVLAGRK-IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+VMEY G L ++ + P ++ + +N+ H +IHRD+K +N++
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIM 148
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYK-----TTHMSAAGTYAWMAPEVIKTSIFSKAS 302
+S +K+ DFG+AR + T + GT +++PE + S
Sbjct: 149 IS--------ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 303 DVWSYGVVLWELLTGEIPY 321
DV+S G VL+E+LTGE P+
Sbjct: 201 DVYSLGCVLYEVLTGEPPF 219
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Query: 140 KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEYA 195
K VAI+ P + + +E K+L F H NI+ + + ++ K +++
Sbjct: 52 KVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 111
Query: 196 RGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENE 255
L ++L + + D + + QI G+ Y+H +++HRDLK SN+LL+ +
Sbjct: 112 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCD-- 166
Query: 256 DLQFKTLKITDFGLAREVYKTTH------MSAAGTYAWMAPEVIKTSI-FSKASDVWSYG 308
LKI DFGLAR V H T + APE++ S ++K+ D+WS G
Sbjct: 167 ------LKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 309 VVLWELLTG 317
+L E+L+
Sbjct: 220 CILAEMLSN 228
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 95/185 (51%), Gaps = 20/185 (10%)
Query: 187 KLCLVMEYARGGPLNRVLAGRKIRPDV-LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSN 245
KL +++ GG L+ L+ + + + +A +I G+ ++H + +++RDLK +N
Sbjct: 266 KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPAN 322
Query: 246 VLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSI-FSKASDV 304
+LL E ++I+D GLA + K ++ GT+ +MAPEV++ + + ++D
Sbjct: 323 ILLDE--------HGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADW 374
Query: 305 WSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF----KTLMEACWEA 360
+S G +L++LL G P++ +++TL + P F ++L+E +
Sbjct: 375 FSLGCMLFKLLRGHSPFRQ---HKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR 431
Query: 361 DSHMR 365
D + R
Sbjct: 432 DVNRR 436
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 95/185 (51%), Gaps = 20/185 (10%)
Query: 187 KLCLVMEYARGGPLNRVLAGRKIRPDV-LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSN 245
KL +++ GG L+ L+ + + + +A +I G+ ++H + +++RDLK +N
Sbjct: 266 KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPAN 322
Query: 246 VLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSI-FSKASDV 304
+LL E ++I+D GLA + K ++ GT+ +MAPEV++ + + ++D
Sbjct: 323 ILLDE--------HGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADW 374
Query: 305 WSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLF----KTLMEACWEA 360
+S G +L++LL G P++ +++TL + P F ++L+E +
Sbjct: 375 FSLGCMLFKLLRGHSPFRQ---HKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR 431
Query: 361 DSHMR 365
D + R
Sbjct: 432 DVNRR 436
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 23/199 (11%)
Query: 135 KGIYEKQEVAIKV--AHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKL 188
+ + + ++VA+KV A D + ++E + +H IV++ P
Sbjct: 32 RDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91
Query: 189 CLVMEYARGGPLNRVLAGRK-IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+VMEY G L ++ + P ++ + +N+ H +IHRD+K +N++
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIM 148
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYK-----TTHMSAAGTYAWMAPEVIKTSIFSKAS 302
+S +K+ DFG+AR + T + GT +++PE + S
Sbjct: 149 IS--------ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 303 DVWSYGVVLWELLTGEIPY 321
DV+S G VL+E+LTGE P+
Sbjct: 201 DVYSLGCVLYEVLTGEPPF 219
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 23/193 (11%)
Query: 141 QEVAIKV--AHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEY 194
++VA+KV A D + ++E + +H IV++ P +VMEY
Sbjct: 38 RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEY 97
Query: 195 ARGGPLNRVLAGRK-IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
G L ++ + P ++ + +N+ H +IHRD+K +N+++S
Sbjct: 98 VDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMIS---- 150
Query: 254 NEDLQFKTLKITDFGLAREVYK-----TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYG 308
+K+ DFG+AR + T + GT +++PE + SDV+S G
Sbjct: 151 ----ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 309 VVLWELLTGEIPY 321
VL+E+LTGE P+
Sbjct: 207 CVLYEVLTGEPPF 219
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI FGLAR +
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILGFGLAR--HTD 176
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 24/192 (12%)
Query: 141 QEVAIK-VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL------CLVME 193
++VAIK ++ P E + +E LL H N++ L+ V + L LVM
Sbjct: 68 EKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP 127
Query: 194 YARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
+ + L +++ G + + + Q+ +G+ Y+H ++HRDLK N+ ++E E
Sbjct: 128 FMQTD-LQKIM-GMEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCE 182
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVL 311
LKI DFGLAR + M+ W APEVI + + +++ D+WS G ++
Sbjct: 183 --------LKILDFGLAR--HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIM 232
Query: 312 WELLTGEIPYKS 323
E+LTG+ +K
Sbjct: 233 AEMLTGKTLFKG 244
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI DF LAR +
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDFYLAR--HTD 176
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI D GLAR +
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDAGLAR--HTD 176
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 23/193 (11%)
Query: 141 QEVAIKV--AHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEY 194
++VA+KV A D + ++E + +H IV++ P +VMEY
Sbjct: 38 RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 97
Query: 195 ARGGPLNRVLAGRK-IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
G L ++ + P ++ + +N+ H +IHRD+K +N+++S
Sbjct: 98 VDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMIS---- 150
Query: 254 NEDLQFKTLKITDFGLAREVYK-----TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYG 308
+K+ DFG+AR + T + GT +++PE + SDV+S G
Sbjct: 151 ----ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 309 VVLWELLTGEIPY 321
VL+E+LTGE P+
Sbjct: 207 CVLYEVLTGEPPF 219
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 20/195 (10%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL----- 188
Y I E+ K++ P ++ + +E L+ + +H+NI+ L+ V L
Sbjct: 44 YDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQD 103
Query: 189 -CLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+VME L++V+ ++ + + Q+ G+ +LH +IHRDLK SN++
Sbjct: 104 VYIVMELMDAN-LSQVIQ-MELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIV 158
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWS 306
+ TLKI DFGLAR + M+ T + APEVI + + D+WS
Sbjct: 159 VKSD--------ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 210
Query: 307 YGVVLWELLTGEIPY 321
GV++ E++ G + +
Sbjct: 211 VGVIMGEMIKGGVLF 225
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 175 IVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWA-IQIAEGMNYLHCQAP 233
+V L L +VMEY GG L +++ DV WA AE + L
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHS 186
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM---SAAGTYAWMAP 290
+ IHRD+K N+LL + LK+ DFG ++ K + +A GT +++P
Sbjct: 187 MGFIHRDVKPDNMLLDKS--------GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISP 238
Query: 291 EVIKT----SIFSKASDVWSYGVVLWELLTGEIPY--KSINXXXXXXXXXXNKLTLPIPS 344
EV+K+ + + D WS GV L+E+L G+ P+ S+ N LT P +
Sbjct: 239 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDN 298
Query: 345 TCPQLFKTLMEA 356
+ K L+ A
Sbjct: 299 DISKEAKNLICA 310
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 175 IVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWA-IQIAEGMNYLHCQAP 233
+V L L +VMEY GG L +++ DV WA AE + L
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHS 191
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM---SAAGTYAWMAP 290
+ IHRD+K N+LL + LK+ DFG ++ K + +A GT +++P
Sbjct: 192 MGFIHRDVKPDNMLLDKS--------GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISP 243
Query: 291 EVIKT----SIFSKASDVWSYGVVLWELLTGEIPY--KSINXXXXXXXXXXNKLTLPIPS 344
EV+K+ + + D WS GV L+E+L G+ P+ S+ N LT P +
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDN 303
Query: 345 TCPQLFKTLMEA 356
+ K L+ A
Sbjct: 304 DISKEAKNLICA 315
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 175 IVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWA-IQIAEGMNYLHCQAP 233
+V L L +VMEY GG L +++ DV WA AE + L
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIHS 192
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM---SAAGTYAWMAP 290
+ LIHRD+K N+LL + LK+ DFG ++ +T + +A GT +++P
Sbjct: 193 MGLIHRDVKPDNMLLD--------KHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISP 244
Query: 291 EVIKT----SIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIP 343
EV+K+ + + D WS GV L+E+L G+ P+ + + +K +L P
Sbjct: 245 EVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFP 301
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 23/193 (11%)
Query: 141 QEVAIKVAHPN--PDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEY 194
++VA+KV + D + ++E + +H IV++ P +VMEY
Sbjct: 55 RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 114
Query: 195 ARGGPLNRVLAGRK-IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
G L ++ + P ++ + +N+ H +IHRD+K +N+++S
Sbjct: 115 VDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMIS---- 167
Query: 254 NEDLQFKTLKITDFGLAREVYK-----TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYG 308
+K+ DFG+AR + T + GT +++PE + SDV+S G
Sbjct: 168 ----ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 223
Query: 309 VVLWELLTGEIPY 321
VL+E+LTGE P+
Sbjct: 224 CVLYEVLTGEPPF 236
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI D GLAR +
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDRGLAR--HTD 176
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 20/163 (12%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVMEYARGGPLNRVLAGRKIRPDVLVD 216
+E +LL H N++ L+ V + L ++ + G LN ++ +K+ D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
QI G+ Y+H +IHRDLK SN+ ++E E LKI D GLAR +
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE--------LKILDGGLAR--HTD 176
Query: 277 THMSAAGTYAWM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
M+ W APE++ + +++ D+WS G ++ ELLTG
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 20/195 (10%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL----- 188
Y I E+ K++ P ++ + +E L+ + +H+NI+ L+ V L
Sbjct: 44 YDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQD 103
Query: 189 -CLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+VME L++V+ ++ + + Q+ G+ +LH +IHRDLK SN++
Sbjct: 104 VYIVMELMDAN-LSQVIQ-MELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIV 158
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWS 306
+ TLKI DFGLAR + M+ T + APEVI + + D+WS
Sbjct: 159 VKSD--------ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 210
Query: 307 YGVVLWELLTGEIPY 321
GV++ E++ G + +
Sbjct: 211 VGVIMGEMIKGGVLF 225
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 111/267 (41%), Gaps = 26/267 (9%)
Query: 95 SIEDINLVSSVINDVKLVEID-YNKLXXXXXXXXXXXXKVYKGIYEKQEVAIKVAHPNPD 153
S D N S I D + Y L Y I E+ K++ P +
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 63
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL------CLVMEYARGGPLNRVLAGR 207
+ + +E L+ +H+NI+ L+ V L +VME L +V+
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQ-M 121
Query: 208 KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDF 267
++ + + Q+ G+ +LH +IHRDLK SN+++ TLKI DF
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC--------TLKILDF 170
Query: 268 GLAREVYKTTHMS-AAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINX 326
GLAR + M+ T + APEVI + + D+WS G ++ E++ G + + +
Sbjct: 171 GLARTAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD- 229
Query: 327 XXXXXXXXXNKLTLPIPSTCPQLFKTL 353
NK+ + + CP+ K L
Sbjct: 230 ----HIDQWNKVIEQLGTPCPEFMKKL 252
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 111/267 (41%), Gaps = 26/267 (9%)
Query: 95 SIEDINLVSSVINDVKLVEID-YNKLXXXXXXXXXXXXKVYKGIYEKQEVAIKVAHPNPD 153
S D N S I D + Y L Y I E+ K++ P +
Sbjct: 4 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 63
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL------CLVMEYARGGPLNRVLAGR 207
+ + +E L+ +H+NI+ L+ V L +VME L +V+
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQ-M 121
Query: 208 KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDF 267
++ + + Q+ G+ +LH +IHRDLK SN+++ TLKI DF
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC--------TLKILDF 170
Query: 268 GLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINX 326
GLAR + M+ T + APEVI + + D+WS G ++ E++ G + + +
Sbjct: 171 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD- 229
Query: 327 XXXXXXXXXNKLTLPIPSTCPQLFKTL 353
NK+ + + CP+ K L
Sbjct: 230 ----HIDQWNKVIEQLGTPCPEFMKKL 252
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 175 IVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWA-IQIAEGMNYLHCQAP 233
+V L L +VMEY GG L +++ DV WA AE + L
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHS 191
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM---SAAGTYAWMAP 290
+ IHRD+K N+LL + LK+ DFG ++ K + +A GT +++P
Sbjct: 192 MGFIHRDVKPDNMLLDKS--------GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISP 243
Query: 291 EVIKT----SIFSKASDVWSYGVVLWELLTGEIPY--KSINXXXXXXXXXXNKLTLPIPS 344
EV+K+ + + D WS GV L+E+L G+ P+ S+ N LT P +
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDN 303
Query: 345 TCPQLFKTLMEA 356
+ K L+ A
Sbjct: 304 DISKEAKNLICA 315
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 111/267 (41%), Gaps = 26/267 (9%)
Query: 95 SIEDINLVSSVINDVKLVEID-YNKLXXXXXXXXXXXXKVYKGIYEKQEVAIKVAHPNPD 153
S D N S I D + Y L Y I E+ K++ P +
Sbjct: 5 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 64
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL------CLVMEYARGGPLNRVLAGR 207
+ + +E L+ +H+NI+ L+ V L +VME L +V+
Sbjct: 65 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQ-M 122
Query: 208 KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDF 267
++ + + Q+ G+ +LH +IHRDLK SN+++ TLKI DF
Sbjct: 123 ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC--------TLKILDF 171
Query: 268 GLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINX 326
GLAR + M+ T + APEVI + + D+WS G ++ E++ G + + +
Sbjct: 172 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD- 230
Query: 327 XXXXXXXXXNKLTLPIPSTCPQLFKTL 353
NK+ + + CP+ K L
Sbjct: 231 ----HIDQWNKVIEQLGTPCPEFMKKL 253
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQS----PK 187
+V++G + +EVA+K+ + + + ++ H NI+ I + +
Sbjct: 57 EVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILGFIAADNKDNGTWTQ 114
Query: 188 LCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLH-----CQAPISLIHRDLK 242
L LV +Y G L L + + ++ A+ A G+ +LH Q ++ HRDLK
Sbjct: 115 LWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 174
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLA-REVYKTTHMSAA-----GTYAWMAPEVIKTS 296
S N+L+ + T I D GLA R T + A GT +MAPEV+ S
Sbjct: 175 SKNILVKKN--------GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 226
Query: 297 I-------FSKASDVWSYGVVLWEL-----LTG-----EIPYKSI-----NXXXXXXXXX 334
I F +A D+++ G+V WE+ + G ++PY + +
Sbjct: 227 INMKHFESFKRA-DIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVC 285
Query: 335 XNKLTLPIPS---TCPQL--FKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQ 385
KL IP+ +C L +M CW A+ R + I K L+ + E I+
Sbjct: 286 EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGIK 341
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 98/214 (45%), Gaps = 20/214 (9%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA----GRKIRPDVLV-D 216
+E LL +H N++ ++ +L +V+E A G L+R++ +++ P+ V
Sbjct: 81 KEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWK 140
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR--EVY 274
+ +Q+ + ++H + ++HRD+K +NV ++ +K+ D GL R
Sbjct: 141 YFVQLCSALEHMHSR---RVMHRDIKPANVFITAT--------GVVKLGDLGLGRFFSSK 189
Query: 275 KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
T S GT +M+PE I + ++ SD+WS G +L+E+ + P+
Sbjct: 190 TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK 249
Query: 335 XNKLTL-PIPST-CPQLFKTLMEACWEADSHMRP 366
+ P+PS + + L+ C D RP
Sbjct: 250 IEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRP 283
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 15/155 (9%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR--EVYKTT 277
Q +G+ YLH +IHRDLK N+ L N+D+ +KI DFGLA E
Sbjct: 150 QTIQGVQYLHNN---RVIHRDLKLGNLFL-----NDDMD---VKIGDFGLATKIEFDGER 198
Query: 278 HMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNK 337
+ GT ++APEV+ S D+WS G +L+ LL G+ P+++ N+
Sbjct: 199 KKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNE 258
Query: 338 LTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTIL 372
+ +P + L+ AD +RPS +L
Sbjct: 259 YS--VPRHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQS----PK 187
+V++G + +EVA+K+ + + + ++ H NI+ I + +
Sbjct: 18 EVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILGFIAADNKDNGTWTQ 75
Query: 188 LCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLH-----CQAPISLIHRDLK 242
L LV +Y G L L + + ++ A+ A G+ +LH Q ++ HRDLK
Sbjct: 76 LWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 135
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLA-REVYKTTHMSAA-----GTYAWMAPEVIKTS 296
S N+L+ + T I D GLA R T + A GT +MAPEV+ S
Sbjct: 136 SKNILVKKN--------GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 187
Query: 297 I-------FSKASDVWSYGVVLWEL-----LTG-----EIPYKSI-----NXXXXXXXXX 334
I F +A D+++ G+V WE+ + G ++PY + +
Sbjct: 188 INMKHFESFKRA-DIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVC 246
Query: 335 XNKLTLPIPS---TCPQL--FKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQ 385
KL IP+ +C L +M CW A+ R + I K L+ + E I+
Sbjct: 247 EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGIK 302
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQS----PK 187
+V++G + +EVA+K+ + + + ++ H NI+ I + +
Sbjct: 21 EVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILGFIAADNKDNGTWTQ 78
Query: 188 LCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLH-----CQAPISLIHRDLK 242
L LV +Y G L L + + ++ A+ A G+ +LH Q ++ HRDLK
Sbjct: 79 LWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 138
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLA-REVYKTTHMSAA-----GTYAWMAPEVIKTS 296
S N+L+ + T I D GLA R T + A GT +MAPEV+ S
Sbjct: 139 SKNILVKKN--------GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 190
Query: 297 I-------FSKASDVWSYGVVLWEL-----LTG-----EIPYKSI-----NXXXXXXXXX 334
I F +A D+++ G+V WE+ + G ++PY + +
Sbjct: 191 INMKHFESFKRA-DIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVC 249
Query: 335 XNKLTLPIPS---TCPQL--FKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQ 385
KL IP+ +C L +M CW A+ R + I K L+ + E I+
Sbjct: 250 EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGIK 305
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 125/296 (42%), Gaps = 53/296 (17%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQS----PK 187
+V++G + +EVA+K+ + + + ++ H NI+ I + +
Sbjct: 24 EVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILGFIAADNKDNGTWTQ 81
Query: 188 LCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLH-----CQAPISLIHRDLK 242
L LV +Y G L L + + ++ A+ A G+ +LH Q ++ HRDLK
Sbjct: 82 LWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 141
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLA-REVYKTTHMSAA-----GTYAWMAPEVIKTS 296
S N+L+ + T I D GLA R T + A GT +MAPEV+ S
Sbjct: 142 SKNILVKKN--------GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 193
Query: 297 I-------FSKASDVWSYGVVLWEL-----LTG-----EIPYKSI-----NXXXXXXXXX 334
I F +A D+++ G+V WE+ + G ++PY + +
Sbjct: 194 INMKHFESFKRA-DIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVC 252
Query: 335 XNKLTLPIPS---TCPQL--FKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQ 385
KL IP+ +C L +M CW A+ R + I K L+ + E I+
Sbjct: 253 EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGIK 308
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 16/174 (9%)
Query: 153 DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGR-KIRP 211
+ N + NV +E +++ +H +V+L + +V++ GG L L +
Sbjct: 55 ERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKE 114
Query: 212 DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR 271
+ + + ++ ++YL Q +IHRD+K N+LL E + ITDF +A
Sbjct: 115 ETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDE--------HGHVHITDFNIAA 163
Query: 272 EVYKTTHMSA-AGTYAWMAPEVI---KTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ + T ++ AGT +MAPE+ K + +S A D WS GV +ELL G PY
Sbjct: 164 MLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 26/179 (14%)
Query: 149 HPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK 208
H + +LE+++Q L V+L KL L+++Y GG L L+ R+
Sbjct: 104 HTRTERQVLEHIRQSPFL---------VTLHYAFQTETKLHLILDYINGGELFTHLSQRE 154
Query: 209 IRPDVLVD-WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDF 267
+ V + +I + +LH + +I+RD+K N+LL + +TDF
Sbjct: 155 RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSN--------GHVVLTDF 203
Query: 268 GLAREVYKTTHMSA---AGTYAWMAPEVIKT--SIFSKASDVWSYGVVLWELLTGEIPY 321
GL++E A GT +MAP++++ S KA D WS GV+++ELLTG P+
Sbjct: 204 GLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 93/189 (49%), Gaps = 20/189 (10%)
Query: 142 EVAIKVAHPNPDENILENVKQEGKLL-WLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL 200
EV + P E + E ++E +L + H +I++LI S + LV + R G L
Sbjct: 128 EVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGEL 187
Query: 201 NRVLAGRKIRPDVLVDWAIQ-IAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQF 259
L + + ++ + E +++LH +++HRDLK N+LL + ++
Sbjct: 188 FDYLTEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQ------ 238
Query: 260 KTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSI------FSKASDVWSYGVVLW 312
++++DFG + + + GT ++APE++K S+ + K D+W+ GV+L+
Sbjct: 239 --IRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILF 296
Query: 313 ELLTGEIPY 321
LL G P+
Sbjct: 297 TLLAGSPPF 305
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 11/187 (5%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLV 215
++ KQE +++ DH NI+ L + + LVME GG L RV+ R R
Sbjct: 50 VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA 109
Query: 216 DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK 275
+ + Y H +++ HRDLK N L D LK+ DFGLA
Sbjct: 110 RIMKDVLSAVAYCH---KLNVAHRDLKPENFLFL-----TDSPDSPLKLIDFGLAARFKP 161
Query: 276 TTHM-SAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
M + GT +++P+V++ ++ D WS GV+++ LL G P+ +
Sbjct: 162 GKMMRTKVGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIR 220
Query: 335 XNKLTLP 341
T P
Sbjct: 221 EGTFTFP 227
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 110/267 (41%), Gaps = 26/267 (9%)
Query: 95 SIEDINLVSSVINDVKLVEID-YNKLXXXXXXXXXXXXKVYKGIYEKQEVAIKVAHPNPD 153
S D N S I D + Y L Y I E+ K++ P +
Sbjct: 6 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 65
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL------CLVMEYARGGPLNRVLAGR 207
+ + +E L+ +H+NI+ L+ V L +VME L +V+
Sbjct: 66 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQ-M 123
Query: 208 KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDF 267
++ + + Q+ G+ +LH +IHRDLK SN+++ TLKI DF
Sbjct: 124 ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC--------TLKILDF 172
Query: 268 GLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINX 326
GLAR + M T + APEVI + + D+WS G ++ E++ G + + +
Sbjct: 173 GLARTAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD- 231
Query: 327 XXXXXXXXXNKLTLPIPSTCPQLFKTL 353
NK+ + + CP+ K L
Sbjct: 232 ----HIDQWNKVIEQLGTPCPEFMKKL 254
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 31/167 (18%)
Query: 168 WLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAI--QIAEGM 225
WL + RN V + + L + MEY G L ++ + W + QI E +
Sbjct: 71 WL-ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 226 NYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM------ 279
+Y+H Q +IHRDLK N+ + E + +KI DFGLA+ V+++ +
Sbjct: 130 SYIHSQG---IIHRDLKPMNIFIDES--------RNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 280 ----------SAAGTYAWMAPEVIK-TSIFSKASDVWSYGVVLWELL 315
SA GT ++A EV+ T +++ D++S G++ +E++
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 11/187 (5%)
Query: 157 LENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLV 215
++ KQE +++ DH NI+ L + + LVME GG L RV+ R R
Sbjct: 67 VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA 126
Query: 216 DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK 275
+ + Y H +++ HRDLK N L D LK+ DFGLA
Sbjct: 127 RIMKDVLSAVAYCH---KLNVAHRDLKPENFLFL-----TDSPDSPLKLIDFGLAARFKP 178
Query: 276 TTHM-SAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXX 334
M + GT +++P+V++ ++ D WS GV+++ LL G P+ +
Sbjct: 179 GKMMRTKVGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIR 237
Query: 335 XNKLTLP 341
T P
Sbjct: 238 EGTFTFP 244
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 16/142 (11%)
Query: 188 LCLVMEYARGGPLNRVLAGR---KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSS 244
L +VME GG L + R + I E + YLH I++ HRD+K
Sbjct: 134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 190
Query: 245 NVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAG---TYAWMAPEVIKTSIFSKA 301
N+L + N LK+TDFG A+E T+H S T ++APEV+ + K+
Sbjct: 191 NLLYTSKRPN-----AILKLTDFGFAKET--TSHNSLTTPCYTPYYVAPEVLGPEKYDKS 243
Query: 302 SDVWSYGVVLWELLTGEIPYKS 323
D+WS GV+++ LL G P+ S
Sbjct: 244 CDMWSLGVIMYILLCGYPPFYS 265
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 15/155 (9%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR--EVYKTT 277
Q +G+ YLH +IHRDLK N+ L N+D+ +KI DFGLA E
Sbjct: 134 QTIQGVQYLHNN---RVIHRDLKLGNLFL-----NDDMD---VKIGDFGLATKIEFDGER 182
Query: 278 HMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNK 337
GT ++APEV+ S D+WS G +L+ LL G+ P+++ N+
Sbjct: 183 KKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNE 242
Query: 338 LTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTIL 372
+ +P + L+ AD +RPS +L
Sbjct: 243 YS--VPRHINPVASALIRRMLHADPTLRPSVAELL 275
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 33/202 (16%)
Query: 134 YKGIYEKQE------VAIK-VAHPNPDENILENVKQEGKLLW---LFDHRNIVSLIGVCL 183
Y +Y+ ++ VA+K V PN +E + + +E LL F+H N+V L+ VC
Sbjct: 17 YGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCA 76
Query: 184 QSP-----KLCLVMEYARGGPLNRVLAGRKIRP----DVLVDWAIQIAEGMNYLHCQAPI 234
S K+ LV E+ R + P + + D Q G+++LH
Sbjct: 77 TSRTDREIKVTLVFEHVDQD--LRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC-- 132
Query: 235 SLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR-EVYKTTHMSAAGTYAWMAPEVI 293
++HRDLK N+L++ T+K+ DFGLAR Y+ T + APEV+
Sbjct: 133 -IVHRDLKPENILVT--------SGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVL 183
Query: 294 KTSIFSKASDVWSYGVVLWELL 315
S ++ D+WS G + E+
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMF 205
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 16/142 (11%)
Query: 188 LCLVMEYARGGPLNRVLAGR---KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSS 244
L +VME GG L + R + I E + YLH I++ HRD+K
Sbjct: 95 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 151
Query: 245 NVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAG---TYAWMAPEVIKTSIFSKA 301
N+L + N LK+TDFG A+E T+H S T ++APEV+ + K+
Sbjct: 152 NLLYTSKRPN-----AILKLTDFGFAKET--TSHNSLTTPCYTPYYVAPEVLGPEKYDKS 204
Query: 302 SDVWSYGVVLWELLTGEIPYKS 323
D+WS GV+++ LL G P+ S
Sbjct: 205 CDMWSLGVIMYILLCGYPPFYS 226
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 16/142 (11%)
Query: 188 LCLVMEYARGGPLNRVLAGR---KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSS 244
L +VME GG L + R + I E + YLH I++ HRD+K
Sbjct: 140 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 196
Query: 245 NVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAG---TYAWMAPEVIKTSIFSKA 301
N+L + N LK+TDFG A+E T+H S T ++APEV+ + K+
Sbjct: 197 NLLYTSKRPN-----AILKLTDFGFAKET--TSHNSLTTPCYTPYYVAPEVLGPEKYDKS 249
Query: 302 SDVWSYGVVLWELLTGEIPYKS 323
D+WS GV+++ LL G P+ S
Sbjct: 250 CDMWSLGVIMYILLCGYPPFYS 271
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 16/142 (11%)
Query: 188 LCLVMEYARGGPLNRVLAGR---KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSS 244
L +VME GG L + R + I E + YLH I++ HRD+K
Sbjct: 94 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 150
Query: 245 NVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAG---TYAWMAPEVIKTSIFSKA 301
N+L + N LK+TDFG A+E T+H S T ++APEV+ + K+
Sbjct: 151 NLLYTSKRPN-----AILKLTDFGFAKET--TSHNSLTTPCYTPYYVAPEVLGPEKYDKS 203
Query: 302 SDVWSYGVVLWELLTGEIPYKS 323
D+WS GV+++ LL G P+ S
Sbjct: 204 CDMWSLGVIMYILLCGYPPFYS 225
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 15/155 (9%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR--EVYKTT 277
Q +G+ YLH +IHRDLK N+ L N+D+ +KI DFGLA E
Sbjct: 150 QTIQGVQYLHNN---RVIHRDLKLGNLFL-----NDDMD---VKIGDFGLATKIEFDGER 198
Query: 278 HMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNK 337
GT ++APEV+ S D+WS G +L+ LL G+ P+++ N+
Sbjct: 199 KKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNE 258
Query: 338 LTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTIL 372
+ +P + L+ AD +RPS +L
Sbjct: 259 YS--VPRHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 16/142 (11%)
Query: 188 LCLVMEYARGGPLNRVLAGR---KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSS 244
L +VME GG L + R + I E + YLH I++ HRD+K
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 146
Query: 245 NVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAG---TYAWMAPEVIKTSIFSKA 301
N+L + N LK+TDFG A+E T+H S T ++APEV+ + K+
Sbjct: 147 NLLYTSKRPN-----AILKLTDFGFAKET--TSHNSLTTPCYTPYYVAPEVLGPEKYDKS 199
Query: 302 SDVWSYGVVLWELLTGEIPYKS 323
D+WS GV+++ LL G P+ S
Sbjct: 200 CDMWSLGVIMYILLCGYPPFYS 221
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 30/181 (16%)
Query: 206 GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKIT 265
G+ I D+L A+ I + + +LH + +S+IHRD+K SNVL++ +K+
Sbjct: 147 GQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINA--------LGQVKMC 196
Query: 266 DFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSI----FSKASDVWSYGVVLWELLTGEIP 320
DFG++ + + + AG +MAPE I + +S SD+WS G+ + EL P
Sbjct: 197 DFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP 256
Query: 321 YKSINXXXXXXXXXXNKLTLPIPSTCPQL--------FKTLMEACWEADSHMRPSFKTIL 372
Y S +L + PQL F C + +S RP++ ++
Sbjct: 257 YDSWG-------TPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELM 309
Query: 373 K 373
+
Sbjct: 310 Q 310
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 16/142 (11%)
Query: 188 LCLVMEYARGGPLNRVLAGR---KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSS 244
L +VME GG L + R + I E + YLH I++ HRD+K
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPE 146
Query: 245 NVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAG---TYAWMAPEVIKTSIFSKA 301
N+L + N LK+TDFG A+E T+H S T ++APEV+ + K+
Sbjct: 147 NLLYTSKRPN-----AILKLTDFGFAKET--TSHNSLTTPCYTPYYVAPEVLGPEKYDKS 199
Query: 302 SDVWSYGVVLWELLTGEIPYKS 323
D+WS GV+++ LL G P+ S
Sbjct: 200 CDMWSLGVIMYILLCGYPPFYS 221
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 16/142 (11%)
Query: 188 LCLVMEYARGGPLNRVLAGR---KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSS 244
L +VME GG L + R + I E + YLH I++ HRD+K
Sbjct: 96 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 152
Query: 245 NVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAG---TYAWMAPEVIKTSIFSKA 301
N+L + N LK+TDFG A+E T+H S T ++APEV+ + K+
Sbjct: 153 NLLYTSKRPN-----AILKLTDFGFAKET--TSHNSLTTPCYTPYYVAPEVLGPEKYDKS 205
Query: 302 SDVWSYGVVLWELLTGEIPYKS 323
D+WS GV+++ LL G P+ S
Sbjct: 206 CDMWSLGVIMYILLCGYPPFYS 227
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 15/155 (9%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR--EVYKTT 277
Q +G+ YLH +IHRDLK N+ L N+D+ +KI DFGLA E
Sbjct: 150 QTIQGVQYLHNN---RVIHRDLKLGNLFL-----NDDMD---VKIGDFGLATKIEFDGER 198
Query: 278 HMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNK 337
GT ++APEV+ S D+WS G +L+ LL G+ P+++ N+
Sbjct: 199 KKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNE 258
Query: 338 LTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTIL 372
+ +P + L+ AD +RPS +L
Sbjct: 259 YS--VPRHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 23/210 (10%)
Query: 175 IVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRP---DVLVDWAIQIAEGMNYLHCQ 231
IV G + + + + ME G L R P +L + I + + YL +
Sbjct: 86 IVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYL--K 141
Query: 232 APISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA-REVYKTTHMSAAGTYAWMAP 290
+IHRD+K SN+LL E + +K+ DFG++ R V +AG A+MAP
Sbjct: 142 EKHGVIHRDVKPSNILLDERGQ--------IKLCDFGISGRLVDDKAKDRSAGCAAYMAP 193
Query: 291 EVIKTSIFSKA-----SDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKL--TLPIP 343
E I +K +DVWS G+ L EL TG+ PYK+ + LP
Sbjct: 194 ERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGH 253
Query: 344 STCPQLFKTLMEACWEADSHMRPSFKTILK 373
F++ ++ C D RP + +L+
Sbjct: 254 MGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 221 IAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS 280
I E + YLH I++ HRD+K N+L + N LK+TDFG A+E T+H S
Sbjct: 140 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPN-----AILKLTDFGFAKET--TSHNS 189
Query: 281 AAG---TYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKS 323
T ++APEV+ + K+ D+WS GV+++ LL G P+ S
Sbjct: 190 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 235
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 221 IAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS 280
I E + YLH I++ HRD+K N+L + N LK+TDFG A+E T+H S
Sbjct: 124 IGEAIQYLH---SINIAHRDVKPENLLYTSKRPN-----AILKLTDFGFAKET--TSHNS 173
Query: 281 AAG---TYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKS 323
T ++APEV+ + K+ D+WS GV+++ LL G P+ S
Sbjct: 174 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 219
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 25/227 (11%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL----- 188
Y + ++ K++ P ++ + +E L+ +H+NI+SL+ V L
Sbjct: 44 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 103
Query: 189 -CLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
LVME L +V+ ++ + + Q+ G+ +LH +IHRDLK SN++
Sbjct: 104 VYLVMELMDAN-LXQVIQ-MELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIV 158
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWS 306
+ TLKI DFGLAR + M+ T + APEVI + + D+WS
Sbjct: 159 VKSD--------XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 210
Query: 307 YGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTL 353
G ++ E++ +I + + NK+ + + CP+ K L
Sbjct: 211 VGCIMGEMVRHKILFPGRD-----YIDQWNKVIEQLGTPCPEFMKKL 252
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 33/202 (16%)
Query: 134 YKGIYEKQE------VAIK-VAHPNPDENILENVKQEGKLLW---LFDHRNIVSLIGVCL 183
Y +Y+ ++ VA+K V PN +E + + +E LL F+H N+V L+ VC
Sbjct: 17 YGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCA 76
Query: 184 QSP-----KLCLVMEYARGGPLNRVLAGRKIRP----DVLVDWAIQIAEGMNYLHCQAPI 234
S K+ LV E+ R + P + + D Q G+++LH
Sbjct: 77 TSRTDREIKVTLVFEHVDQD--LRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC-- 132
Query: 235 SLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR-EVYKTTHMSAAGTYAWMAPEVI 293
++HRDLK N+L++ T+K+ DFGLAR Y+ T + APEV+
Sbjct: 133 -IVHRDLKPENILVT--------SGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVL 183
Query: 294 KTSIFSKASDVWSYGVVLWELL 315
S ++ D+WS G + E+
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMF 205
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 221 IAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS 280
I E + YLH I++ HRD+K N+L + N LK+TDFG A+E T+H S
Sbjct: 125 IGEAIQYLH---SINIAHRDVKPENLLYTSKRPN-----AILKLTDFGFAKET--TSHNS 174
Query: 281 AAG---TYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKS 323
T ++APEV+ + K+ D+WS GV+++ LL G P+ S
Sbjct: 175 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 220
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 25/227 (11%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL----- 188
Y + ++ K++ P ++ + +E L+ +H+NI+SL+ V L
Sbjct: 44 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQD 103
Query: 189 -CLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
LVME L +V+ ++ + + Q+ G+ +LH +IHRDLK SN++
Sbjct: 104 VYLVMELMDAN-LXQVIQ-MELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIV 158
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWS 306
+ TLKI DFGLAR + M+ T + APEVI + + D+WS
Sbjct: 159 VKSD--------XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 210
Query: 307 YGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTL 353
G ++ E++ +I + + NK+ + + CP+ K L
Sbjct: 211 VGCIMGEMVRHKILFPGRD-----YIDQWNKVIEQLGTPCPEFMKKL 252
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 25/227 (11%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL----- 188
Y + ++ K++ P ++ + +E L+ +H+NI+SL+ V L
Sbjct: 37 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 96
Query: 189 -CLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
LVME L +V+ ++ + + Q+ G+ +LH +IHRDLK SN++
Sbjct: 97 VYLVMELMDAN-LXQVIQ-MELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIV 151
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWS 306
+ TLKI DFGLAR + M+ T + APEVI + + D+WS
Sbjct: 152 VKSD--------XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 203
Query: 307 YGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTL 353
G ++ E++ +I + + NK+ + + CP+ K L
Sbjct: 204 VGCIMGEMVRHKILFPGRD-----YIDQWNKVIEQLGTPCPEFMKKL 245
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 31/178 (17%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGV--------------CLQSPKLCLV--MEYARGGPLN 201
E ++E K L DH NIV G +S CL ME+ G L
Sbjct: 49 EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLE 108
Query: 202 RVLA---GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
+ + G K+ + ++ QI +G++Y+H + LI+RDLK SN+ L +
Sbjct: 109 QWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDT------- 158
Query: 259 FKTLKITDFGLAREVYKT-THMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELL 315
K +KI DFGL + + GT +M+PE I + + K D+++ G++L ELL
Sbjct: 159 -KQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 221 IAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS 280
I E + YLH I++ HRD+K N+L + N LK+TDFG A+E T+H S
Sbjct: 124 IGEAIQYLH---SINIAHRDVKPENLLYTSKRPN-----AILKLTDFGFAKET--TSHNS 173
Query: 281 ---AAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKS 323
T ++APEV+ + K+ D+WS GV+++ LL G P+ S
Sbjct: 174 LTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 219
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 21/125 (16%)
Query: 192 MEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEP 251
+E RG L++VLA ++ QI +G++Y+H + LIHRDLK SN+ L +
Sbjct: 125 IEKRRGEKLDKVLA---------LELFEQITKGVDYIHSKK---LIHRDLKPSNIFLVDT 172
Query: 252 IENEDLQFKTLKITDFGLAREVYKTTHMS-AAGTYAWMAPEVIKTSIFSKASDVWSYGVV 310
K +KI DFGL + + + GT +M+PE I + + K D+++ G++
Sbjct: 173 --------KQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLI 224
Query: 311 LWELL 315
L ELL
Sbjct: 225 LAELL 229
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 123/293 (41%), Gaps = 53/293 (18%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQS----PK 187
+V++G + +EVA+K+ + + + ++ H NI+ I + +
Sbjct: 19 EVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILGFIAADNKDNGTWTQ 76
Query: 188 LCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLH-----CQAPISLIHRDLK 242
L LV +Y G L L + + ++ A+ A G+ +LH Q ++ HRDLK
Sbjct: 77 LWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 136
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLA-REVYKTTHMSAA-----GTYAWMAPEVIKTS 296
S N+L+ + T I D GLA R T + A GT +MAPEV+ S
Sbjct: 137 SKNILVKKN--------GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 188
Query: 297 I-------FSKASDVWSYGVVLWEL-----LTG-----EIPYKSI-----NXXXXXXXXX 334
I F +A D+++ G+V WE+ + G ++PY + +
Sbjct: 189 INMKHFESFKRA-DIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVC 247
Query: 335 XNKLTLPIPS---TCPQL--FKTLMEACWEADSHMRPSFKTILKALNNIVHSE 382
KL IP+ +C L +M CW A+ R + I K L+ + E
Sbjct: 248 EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 300
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 20/222 (9%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQ--SPKLCLVMEYARGGPLNRVLA-GRKIRPDVLVDWAI 219
E LL H NIV + + L +VMEY GG L V+ G K R + ++ +
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 220 QIAEGMN------YLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV 273
++ + + +++HRDLK +NV L + +K+ DFGLAR +
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK--------QNVKLGDFGLARIL 166
Query: 274 YKTTHMSAA--GTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXX 331
T + A GT +M+PE + +++ SD+WS G +L+EL P+ + +
Sbjct: 167 NHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAG 226
Query: 332 XXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILK 373
K IP ++ + RPS + IL+
Sbjct: 227 KIREGKFR-RIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 123/293 (41%), Gaps = 53/293 (18%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQS----PK 187
+V++G + +EVA+K+ + + + ++ H NI+ I + +
Sbjct: 44 EVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILGFIAADNKDNGTWTQ 101
Query: 188 LCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLH-----CQAPISLIHRDLK 242
L LV +Y G L L + + ++ A+ A G+ +LH Q ++ HRDLK
Sbjct: 102 LWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 161
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLA-REVYKTTHMSAA-----GTYAWMAPEVIKTS 296
S N+L+ + T I D GLA R T + A GT +MAPEV+ S
Sbjct: 162 SKNILVKKN--------GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 213
Query: 297 I-------FSKASDVWSYGVVLWEL-----LTG-----EIPYKSI-----NXXXXXXXXX 334
I F +A D+++ G+V WE+ + G ++PY + +
Sbjct: 214 INMKHFESFKRA-DIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVC 272
Query: 335 XNKLTLPIPS---TCPQL--FKTLMEACWEADSHMRPSFKTILKALNNIVHSE 382
KL IP+ +C L +M CW A+ R + I K L+ + E
Sbjct: 273 EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 325
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 20/195 (10%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL----- 188
Y I E+ K++ P ++ + +E L+ + +H+NI+ L+ V L
Sbjct: 44 YDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQD 103
Query: 189 -CLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+VME L++V+ ++ + + Q+ G+ +LH +IHRDLK SN++
Sbjct: 104 VYIVMELMDAN-LSQVIQ-MELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIV 158
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWS 306
+ TLKI DFGLAR + M+ T + APEVI + + D+WS
Sbjct: 159 VKSD--------ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 210
Query: 307 YGVVLWELLTGEIPY 321
G ++ E++ G + +
Sbjct: 211 VGCIMGEMIKGGVLF 225
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 24/205 (11%)
Query: 133 VYKGIYEKQEV--AIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCL 190
VYKG+ + V A+K + +E +E L+ H NIV L V KL L
Sbjct: 21 VYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTL 80
Query: 191 VMEYARGGPLNRVLAGRKI-------RPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKS 243
V E+ L + + R + +++ + Q+ +G+ + H ++HRDLK
Sbjct: 81 VFEFMDND-LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKP 136
Query: 244 SNVLLSEPIENEDLQFKTLKITDFGLARE--VYKTTHMSAAGTYAWMAPEVIKTS-IFSK 300
N+L+++ + LK+ DFGLAR + T S T + AP+V+ S +S
Sbjct: 137 QNLLINKRGQ--------LKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYST 188
Query: 301 ASDVWSYGVVLWELLTGEIPYKSIN 325
+ D+WS G +L E++TG+ + N
Sbjct: 189 SIDIWSCGCILAEMITGKPLFPGTN 213
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 20/195 (10%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL----- 188
Y I E+ K++ P ++ + +E L+ + +H+NI+ L+ V L
Sbjct: 44 YDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQD 103
Query: 189 -CLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+VME L++V+ ++ + + Q+ G+ +LH +IHRDLK SN++
Sbjct: 104 VYIVMELMDAN-LSQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIV 158
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWS 306
+ TLKI DFGLAR + M+ T + APEVI + + D+WS
Sbjct: 159 VKSD--------ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 210
Query: 307 YGVVLWELLTGEIPY 321
G ++ E++ G + +
Sbjct: 211 VGCIMGEMIKGGVLF 225
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 91/192 (47%), Gaps = 16/192 (8%)
Query: 132 KVYKGI--YEKQEVAIK-VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL 188
+VYK I + VAIK + + +E + +E LL HRNI+ L V + +L
Sbjct: 49 EVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRL 108
Query: 189 CLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
L+ EYA + + V+ + Q+ G+N+ H + +HRDLK N+LL
Sbjct: 109 HLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLL 165
Query: 249 SEPIENEDLQFKTLKITDFGLARE----VYKTTHMSAAGTYAWMAPEVIKTSI-FSKASD 303
S +E LKI DFGLAR + + TH T + PE++ S +S + D
Sbjct: 166 SVSDASET---PVLKIGDFGLARAFGIPIRQFTH--EIITLWYRPPEILLGSRHYSTSVD 220
Query: 304 VWSYGVVLWELL 315
+WS + E+L
Sbjct: 221 IWSIACIWAEML 232
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 140 KQEVAIK-VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVME 193
+Q+VA+K ++ P +E +LL H N++ L+ V + + ++
Sbjct: 45 RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVT 104
Query: 194 YARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
G LN ++ + + + + Q+ G+ Y+H +IHRDLK SNV ++E E
Sbjct: 105 TLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCE 161
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSI-FSKASDVWSYGVVLW 312
L+I DFGLAR+ T + APE++ + +++ D+WS G ++
Sbjct: 162 --------LRILDFGLARQA-DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 212
Query: 313 ELLTGE 318
ELL G+
Sbjct: 213 ELLQGK 218
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 91/186 (48%), Gaps = 19/186 (10%)
Query: 140 KQEVAIK-VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVME 193
+Q+VA+K ++ P +E +LL H N++ L+ V + + ++
Sbjct: 53 RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVT 112
Query: 194 YARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
G LN ++ + + + + Q+ G+ Y+H +IHRDLK SNV ++E E
Sbjct: 113 TLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSE 169
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSI-FSKASDVWSYGVVLW 312
L+I DFGLAR+ + A T + APE++ + +++ D+WS G ++
Sbjct: 170 --------LRILDFGLARQADEEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 313 ELLTGE 318
ELL G+
Sbjct: 221 ELLQGK 226
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 33/202 (16%)
Query: 134 YKGIYEKQE------VAIK-VAHPNPDENILENVKQEGKLLW---LFDHRNIVSLIGVCL 183
Y +Y+ ++ VA+K V PN +E + + +E LL F+H N+V L+ VC
Sbjct: 17 YGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCA 76
Query: 184 QSP-----KLCLVMEYARGGPLNRVLAGRKIRP----DVLVDWAIQIAEGMNYLHCQAPI 234
S K+ LV E+ R + P + + D Q G+++LH
Sbjct: 77 TSRTDREIKVTLVFEHVDQD--LRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC-- 132
Query: 235 SLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR-EVYKTTHMSAAGTYAWMAPEVI 293
++HRDLK N+L++ T+K+ DFGLAR Y+ T + APEV+
Sbjct: 133 -IVHRDLKPENILVT--------SGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVL 183
Query: 294 KTSIFSKASDVWSYGVVLWELL 315
S ++ D+WS G + E+
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMF 205
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 25/227 (11%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL----- 188
Y + ++ K++ P ++ + +E L+ +H+NI+SL+ V L
Sbjct: 44 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQD 103
Query: 189 -CLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
LVME L +V+ ++ + + Q+ G+ +LH +IHRDLK SN++
Sbjct: 104 VYLVMELMDAN-LXQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIV 158
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWS 306
+ TLKI DFGLAR + M+ T + APEVI + + D+WS
Sbjct: 159 VKSD--------XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 210
Query: 307 YGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTL 353
G ++ E++ +I + + NK+ + + CP+ K L
Sbjct: 211 VGCIMGEMVRHKILFPGRD-----YIDQWNKVIEQLGTPCPEFMKKL 252
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 20/195 (10%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL----- 188
Y I E+ K++ P ++ + +E L+ +H+NI+ L+ V L
Sbjct: 44 YDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 103
Query: 189 -CLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+VME L++V+ ++ + + Q+ G+ +LH +IHRDLK SN++
Sbjct: 104 VYIVMELMDAN-LSQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIV 158
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWS 306
+ TLKI DFGLAR + M+ T + APEVI + + D+WS
Sbjct: 159 VKSDC--------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 210
Query: 307 YGVVLWELLTGEIPY 321
G ++ E++ G + +
Sbjct: 211 VGCIMGEMIKGGVLF 225
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 20/195 (10%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL----- 188
Y I E+ K++ P ++ + +E L+ +H+NI+ L+ V L
Sbjct: 44 YDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 103
Query: 189 -CLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+VME L++V+ ++ + + Q+ G+ +LH +IHRDLK SN++
Sbjct: 104 VYIVMELMDAN-LSQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIV 158
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWS 306
+ TLKI DFGLAR + M+ T + APEVI + + D+WS
Sbjct: 159 VKSD--------ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 210
Query: 307 YGVVLWELLTGEIPY 321
G ++ E++ G + +
Sbjct: 211 VGCIMGEMIKGGVLF 225
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 25/227 (11%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL----- 188
Y + ++ K++ P ++ + +E L+ +H+NI+SL+ V L
Sbjct: 38 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 97
Query: 189 -CLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
LVME L +V+ ++ + + Q+ G+ +LH +IHRDLK SN++
Sbjct: 98 VYLVMELMDAN-LCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIV 152
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWS 306
+ TLKI DFGLAR + M+ T + APEVI + + D+WS
Sbjct: 153 VKSDC--------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 204
Query: 307 YGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTL 353
G ++ E++ +I + + NK+ + + CP+ K L
Sbjct: 205 VGCIMGEMVRHKILFPGRD-----YIDQWNKVIEQLGTPCPEFMKKL 246
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLN-RVLAGRKIRPDV----LVDW 217
E K+L R IVSL LCLVM GG + + + P + +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 218 AIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY--K 275
QI G+ +LH + ++I+RDLK NVLL + ++I+D GLA E+ +
Sbjct: 295 TAQIVSGLEHLHQR---NIIYRDLKPENVLLDDD--------GNVRISDLGLAVELKAGQ 343
Query: 276 TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKS 323
T AGT +MAPE++ + + D ++ GV L+E++ P+++
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 25/227 (11%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL----- 188
Y + ++ K++ P ++ + +E L+ +H+NI+SL+ V L
Sbjct: 38 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 97
Query: 189 -CLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
LVME L +V+ ++ + + Q+ G+ +LH +IHRDLK SN++
Sbjct: 98 VYLVMELMDAN-LCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIV 152
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWS 306
+ TLKI DFGLAR + M+ T + APEVI + + D+WS
Sbjct: 153 VKSDC--------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 204
Query: 307 YGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTL 353
G ++ E++ +I + + NK+ + + CP+ K L
Sbjct: 205 VGCIMGEMVRHKILFPGRD-----YIDQWNKVIEQLGTPCPEFMKKL 246
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLN-RVLAGRKIRPDV----LVDW 217
E K+L R IVSL LCLVM GG + + + P + +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 218 AIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY--K 275
QI G+ +LH + ++I+RDLK NVLL + ++I+D GLA E+ +
Sbjct: 295 TAQIVSGLEHLHQR---NIIYRDLKPENVLLDDD--------GNVRISDLGLAVELKAGQ 343
Query: 276 TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKS 323
T AGT +MAPE++ + + D ++ GV L+E++ P+++
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLN-RVLAGRKIRPDV----LVDW 217
E K+L R IVSL LCLVM GG + + + P + +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 218 AIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY--K 275
QI G+ +LH + ++I+RDLK NVLL + ++I+D GLA E+ +
Sbjct: 295 TAQIVSGLEHLHQR---NIIYRDLKPENVLLDDD--------GNVRISDLGLAVELKAGQ 343
Query: 276 TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKS 323
T AGT +MAPE++ + + D ++ GV L+E++ P+++
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 25/227 (11%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL----- 188
Y + ++ K++ P ++ + +E L+ +H+NI+SL+ V L
Sbjct: 43 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 102
Query: 189 -CLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
LVME L +V+ ++ + + Q+ G+ +LH +IHRDLK SN++
Sbjct: 103 VYLVMELMDAN-LCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIV 157
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWS 306
+ TLKI DFGLAR + M+ T + APEVI + + D+WS
Sbjct: 158 VKSDC--------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 209
Query: 307 YGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTL 353
G ++ E++ +I + + NK+ + + CP+ K L
Sbjct: 210 VGCIMGEMVRHKILFPGRD-----YIDQWNKVIEQLGTPCPEFMKKL 251
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 25/227 (11%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL----- 188
Y + ++ K++ P ++ + +E L+ +H+NI+SL+ V L
Sbjct: 45 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 104
Query: 189 -CLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
LVME L +V+ ++ + + Q+ G+ +LH +IHRDLK SN++
Sbjct: 105 VYLVMELMDAN-LCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIV 159
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWS 306
+ TLKI DFGLAR + M+ T + APEVI + + D+WS
Sbjct: 160 VKSDC--------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 211
Query: 307 YGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTL 353
G ++ E++ +I + + NK+ + + CP+ K L
Sbjct: 212 VGCIMGEMVRHKILFPGRD-----YIDQWNKVIEQLGTPCPEFMKKL 253
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 25/227 (11%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL----- 188
Y + ++ K++ P ++ + +E L+ +H+NI+SL+ V L
Sbjct: 45 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 104
Query: 189 -CLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
LVME L +V+ ++ + + Q+ G+ +LH +IHRDLK SN++
Sbjct: 105 VYLVMELMDAN-LCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIV 159
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWS 306
+ TLKI DFGLAR + M+ T + APEVI + + D+WS
Sbjct: 160 VKSDC--------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 211
Query: 307 YGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTL 353
G ++ E++ +I + + NK+ + + CP+ K L
Sbjct: 212 VGCIMGEMVRHKILFPGRD-----YIDQWNKVIEQLGTPCPEFMKKL 253
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 25/227 (11%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL----- 188
Y + ++ K++ P ++ + +E L+ +H+NI+SL+ V L
Sbjct: 44 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 103
Query: 189 -CLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
LVME L +V+ ++ + + Q+ G+ +LH +IHRDLK SN++
Sbjct: 104 VYLVMELMDAN-LCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIV 158
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWS 306
+ TLKI DFGLAR + M+ T + APEVI + + D+WS
Sbjct: 159 VKSDC--------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 210
Query: 307 YGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTL 353
G ++ E++ +I + + NK+ + + CP+ K L
Sbjct: 211 VGCIMGEMVRHKILFPGRD-----YIDQWNKVIEQLGTPCPEFMKKL 252
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 25/227 (11%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL----- 188
Y + ++ K++ P ++ + +E L+ +H+NI+SL+ V L
Sbjct: 37 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 96
Query: 189 -CLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
LVME L +V+ ++ + + Q+ G+ +LH +IHRDLK SN++
Sbjct: 97 VYLVMELMDAN-LCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIV 151
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWS 306
+ TLKI DFGLAR + M+ T + APEVI + + D+WS
Sbjct: 152 VKSDC--------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 203
Query: 307 YGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTL 353
G ++ E++ +I + + NK+ + + CP+ K L
Sbjct: 204 VGCIMGEMVRHKILFPGRD-----YIDQWNKVIEQLGTPCPEFMKKL 245
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 13/106 (12%)
Query: 221 IAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS 280
I E + YLH I++ HRD+K N+L + N LK+TDFG A+E T+H S
Sbjct: 170 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPN-----AILKLTDFGFAKET--TSHNS 219
Query: 281 AAG---TYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKS 323
T ++APEV+ + K+ D WS GV+ + LL G P+ S
Sbjct: 220 LTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYS 265
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 25/227 (11%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL----- 188
Y + ++ K++ P ++ + +E L+ +H+NI+SL+ V L
Sbjct: 44 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 103
Query: 189 -CLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
LVME L +V+ ++ + + Q+ G+ +LH +IHRDLK SN++
Sbjct: 104 VYLVMELMDAN-LCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIV 158
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWS 306
+ TLKI DFGLAR + M+ T + APEVI + + D+WS
Sbjct: 159 VKSDC--------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 210
Query: 307 YGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTL 353
G ++ E++ +I + + NK+ + + CP+ K L
Sbjct: 211 VGCIMGEMVRHKILFPGRD-----YIDQWNKVIEQLGTPCPEFMKKL 252
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 28/190 (14%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEYARGG 198
VAIK P +E K+L F H NI+++ + ++ +++
Sbjct: 39 VAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT 98
Query: 199 PLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
L+RV++ + + D + + Q + LH ++IHRDLK SN+L++ +
Sbjct: 99 DLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCD----- 150
Query: 259 FKTLKITDFGLAREVYK--------TTHMSAAGTYA----WMAPEVIKTSI-FSKASDVW 305
LK+ DFGLAR + + T S Y + APEV+ TS +S+A DVW
Sbjct: 151 ---LKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVW 207
Query: 306 SYGVVLWELL 315
S G +L EL
Sbjct: 208 SCGCILAELF 217
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 25/227 (11%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL----- 188
Y + ++ K++ P ++ + +E L+ +H+NI+SL+ V L
Sbjct: 44 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQD 103
Query: 189 -CLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
LVME L +V+ ++ + + Q+ G+ +LH +IHRDLK SN++
Sbjct: 104 VYLVMELMDAN-LCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIV 158
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWS 306
+ TLKI DFGLAR + M+ T + APEVI + + D+WS
Sbjct: 159 VKSD--------XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 210
Query: 307 YGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTL 353
G ++ E++ +I + + NK+ + + CP+ K L
Sbjct: 211 VGCIMGEMVRHKILFPGRD-----YIDQWNKVIEQLGTPCPEFMKKL 252
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 25/227 (11%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL----- 188
Y + ++ K++ P ++ + +E L+ +H+NI+SL+ V L
Sbjct: 82 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 141
Query: 189 -CLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
LVME L +V+ ++ + + Q+ G+ +LH +IHRDLK SN++
Sbjct: 142 VYLVMELMDAN-LCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIV 196
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWS 306
+ TLKI DFGLAR + M+ T + APEVI + + D+WS
Sbjct: 197 VKSDC--------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 248
Query: 307 YGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTL 353
G ++ E++ +I + + NK+ + + CP+ K L
Sbjct: 249 VGCIMGEMVRHKILFPGRD-----YIDQWNKVIEQLGTPCPEFMKKL 290
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 20/187 (10%)
Query: 146 KVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL------CLVMEYARGGP 199
K++ P ++ + +E LL +H+NI+SL+ V L LVME
Sbjct: 54 KLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN- 112
Query: 200 LNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQF 259
L +V+ ++ + + Q+ G+ +LH +IHRDLK SN+++
Sbjct: 113 LCQVI-HMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC------- 161
Query: 260 KTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGE 318
TLKI DFGLAR M+ T + APEVI + + D+WS G ++ EL+ G
Sbjct: 162 -TLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGS 220
Query: 319 IPYKSIN 325
+ ++ +
Sbjct: 221 VIFQGTD 227
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLN-RVLAGRKIRPDV----LVDW 217
E K+L R IVSL LCLVM GG + + + P + +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 218 AIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY--K 275
QI G+ +LH + ++I+RDLK NVLL + ++I+D GLA E+ +
Sbjct: 295 TAQIVSGLEHLHQR---NIIYRDLKPENVLLDDD--------GNVRISDLGLAVELKAGQ 343
Query: 276 TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKS 323
T AGT +MAPE++ + + D ++ GV L+E++ P+++
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 91/186 (48%), Gaps = 19/186 (10%)
Query: 140 KQEVAIK-VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL-----CLVME 193
+Q+VA+K ++ P +E +LL H N++ L+ V + + ++
Sbjct: 53 RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVT 112
Query: 194 YARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIE 253
G LN ++ + + + + Q+ G+ Y+H +IHRDLK SNV ++E E
Sbjct: 113 TLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSE 169
Query: 254 NEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSI-FSKASDVWSYGVVLW 312
L+I DFGLAR+ + A T + APE++ + +++ D+WS G ++
Sbjct: 170 --------LRILDFGLARQADEEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 313 ELLTGE 318
ELL G+
Sbjct: 221 ELLQGK 226
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 25/227 (11%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL----- 188
Y + ++ K++ P ++ + +E L+ +H+NI+SL+ V L
Sbjct: 82 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 141
Query: 189 -CLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
LVME L +V+ ++ + + Q+ G+ +LH +IHRDLK SN++
Sbjct: 142 VYLVMELMDAN-LCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIV 196
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWS 306
+ TLKI DFGLAR + M+ T + APEVI + + D+WS
Sbjct: 197 VKSDC--------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 248
Query: 307 YGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTL 353
G ++ E++ +I + + NK+ + + CP+ K L
Sbjct: 249 VGCIMGEMVRHKILFPGRD-----YIDQWNKVIEQLGTPCPEFMKKL 290
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 113/279 (40%), Gaps = 30/279 (10%)
Query: 135 KGIYEKQEVAIK--VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQS-----PK 187
+G+++ A+K + H D E ++E + LF+H NI+ L+ CL+
Sbjct: 49 EGLHDGHFYALKRILCHEQQDR---EEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105
Query: 188 LCLVMEYARGGPLNRVL----AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKS 243
L+ + RG N + G + D ++ + I G+ +H + HRDLK
Sbjct: 106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKP 162
Query: 244 SNVLLS---EPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKT---SI 297
+N+LL +P+ + I G + + + T ++ APE+ +
Sbjct: 163 TNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCV 222
Query: 298 FSKASDVWSYGVVLWELLTGEIPYKSI-NXXXXXXXXXXNKLTLPIPSTCPQLFKTLMEA 356
+ +DVWS G VL+ ++ GE PY + N+L++P L+ +
Sbjct: 223 IDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNS 282
Query: 357 CWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQ 395
D H RP +L L E +Q P H Q
Sbjct: 283 MMTVDPHQRPHIPLLLSQL------EALQPPAPGQHTTQ 315
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 111/267 (41%), Gaps = 26/267 (9%)
Query: 95 SIEDINLVSSVINDVKLVEID-YNKLXXXXXXXXXXXXKVYKGIYEKQEVAIKVAHPNPD 153
S D N S I D + Y L Y I E+ K++ P +
Sbjct: 9 SKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN 68
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL------CLVMEYARGGPLNRVLAGR 207
+ + +E L+ +H+NI+ L+ V L +VME L +V+
Sbjct: 69 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQ-M 126
Query: 208 KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDF 267
++ + + Q+ G+ +LH +IHRDLK SN+++ TLKI DF
Sbjct: 127 ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC--------TLKILDF 175
Query: 268 GLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINX 326
GLAR + M+ T + APEVI + + D+WS G ++ E++ +I + +
Sbjct: 176 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRD- 234
Query: 327 XXXXXXXXXNKLTLPIPSTCPQLFKTL 353
NK+ + + CP+ K L
Sbjct: 235 ----YIDQWNKVIEQLGTPCPEFMKKL 257
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 95/222 (42%), Gaps = 20/222 (9%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQ--SPKLCLVMEYARGGPLNRVLA-GRKIRPDVLVDWAI 219
E LL H NIV + + L +VMEY GG L V+ G K R + ++ +
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 220 QIAEGMN------YLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV 273
++ + + +++HRDLK +NV L + +K+ DFGLAR +
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK--------QNVKLGDFGLARIL 166
Query: 274 YKTTHMSAA--GTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXX 331
T + GT +M+PE + +++ SD+WS G +L+EL P+ + +
Sbjct: 167 NHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAG 226
Query: 332 XXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILK 373
K IP ++ + RPS + IL+
Sbjct: 227 KIREGKFR-RIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 30/181 (16%)
Query: 206 GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKIT 265
G+ I D+L A+ I + + +LH + +S+IHRD+K SNVL++ +K+
Sbjct: 103 GQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLIN--------ALGQVKMC 152
Query: 266 DFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSI----FSKASDVWSYGVVLWELLTGEIP 320
DFG++ + AG +MAPE I + +S SD+WS G+ + EL P
Sbjct: 153 DFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP 212
Query: 321 YKSINXXXXXXXXXXNKLTLPIPSTCPQL--------FKTLMEACWEADSHMRPSFKTIL 372
Y S +L + PQL F C + +S RP++ ++
Sbjct: 213 YDSWG-------TPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELM 265
Query: 373 K 373
+
Sbjct: 266 Q 266
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 20/195 (10%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL----- 188
Y I E+ K++ P ++ + +E L+ +H+NI+ L+ V L
Sbjct: 44 YDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 103
Query: 189 -CLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+VME L +V+ ++ + + Q+ G+ +LH +IHRDLK SN++
Sbjct: 104 VYIVMELMDAN-LCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIV 158
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWS 306
+ TLKI DFGLAR + M+ T + APEVI + + D+WS
Sbjct: 159 VKSDC--------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 210
Query: 307 YGVVLWELLTGEIPY 321
G ++ E++ G + +
Sbjct: 211 VGCIMGEMIKGGVLF 225
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 19/143 (13%)
Query: 188 LCLVMEYARGGPLNRVLAGR-------KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRD 240
L ++ME GG L + R + +++ D I + +LH ++ HRD
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRD----IGTAIQFLHSH---NIAHRD 134
Query: 241 LKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSIFSK 300
+K N+L + ++ LK+TDFG A+E + + T ++APEV+ + K
Sbjct: 135 VKPENLLYTSKEKD-----AVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDK 189
Query: 301 ASDVWSYGVVLWELLTGEIPYKS 323
+ D+WS GV+++ LL G P+ S
Sbjct: 190 SCDMWSLGVIMYILLCGFPPFYS 212
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 167 LWLFDHRNIVSLIGVCLQS-----PKLCLVMEYARGGPLNRV--LAGRKIRPDVLVDWAI 219
L F+H N+V L VC S KL LV E+ + + + + + D
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR-EVYKTTH 278
Q+ G+++LH ++HRDLK N+L++ + +K+ DFGLAR ++
Sbjct: 128 QLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQ--------IKLADFGLARIYSFQMAL 176
Query: 279 MSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELL 315
S T + APEV+ S ++ D+WS G + E+
Sbjct: 177 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 19/143 (13%)
Query: 188 LCLVMEYARGGPLNRVLAGR-------KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRD 240
L ++ME GG L + R + +++ D I + +LH ++ HRD
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRD----IGTAIQFLHSH---NIAHRD 153
Query: 241 LKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSIFSK 300
+K N+L + ++ LK+TDFG A+E + + T ++APEV+ + K
Sbjct: 154 VKPENLLYTSKEKD-----AVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDK 208
Query: 301 ASDVWSYGVVLWELLTGEIPYKS 323
+ D+WS GV+++ LL G P+ S
Sbjct: 209 SCDMWSLGVIMYILLCGFPPFYS 231
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 25/227 (11%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL----- 188
Y I E+ K++ P ++ + +E L+ +H+NI+ L+ V L
Sbjct: 38 YDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 97
Query: 189 -CLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+VME L +V+ ++ + + Q+ G+ +LH +IHRDLK SN++
Sbjct: 98 VYIVMELMDAN-LCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIV 152
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWS 306
+ TLKI DFGLAR + M+ T + APEVI + + D+WS
Sbjct: 153 VKSDC--------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWS 204
Query: 307 YGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTL 353
G ++ E++ +I + + NK+ + + CP+ K L
Sbjct: 205 VGCIMGEMVCHKILFPGRD-----YIDQWNKVIEQLGTPCPEFMKKL 246
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 28/190 (14%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEYARGG 198
VAIK P +E K+L F H NI+++ + ++ +++
Sbjct: 39 VAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT 98
Query: 199 PLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
L+RV++ + + D + + Q + LH ++IHRDLK SN+L++ +
Sbjct: 99 DLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCD----- 150
Query: 259 FKTLKITDFGLAREV------------YKTTHMSAAGTYAWMAPEVIKTSI-FSKASDVW 305
LK+ DFGLAR + ++ T + APEV+ TS +S+A DVW
Sbjct: 151 ---LKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVW 207
Query: 306 SYGVVLWELL 315
S G +L EL
Sbjct: 208 SCGCILAELF 217
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 28/190 (14%)
Query: 143 VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV----CLQSPKLCLVMEYARGG 198
VAIK P +E K+L F H NI+++ + ++ +++
Sbjct: 39 VAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT 98
Query: 199 PLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
L+RV++ + + D + + Q + LH ++IHRDLK SN+L++ +
Sbjct: 99 DLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCD----- 150
Query: 259 FKTLKITDFGLAREV------------YKTTHMSAAGTYAWMAPEVIKTSI-FSKASDVW 305
LK+ DFGLAR + ++ + T + APEV+ TS +S+A DVW
Sbjct: 151 ---LKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVW 207
Query: 306 SYGVVLWELL 315
S G +L EL
Sbjct: 208 SCGCILAELF 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 83/173 (47%), Gaps = 21/173 (12%)
Query: 153 DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK--IR 210
DE I +E LL H NIVSLI V L LV E+ L +VL K ++
Sbjct: 59 DEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKD-LKKVLDENKTGLQ 117
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
+ + Q+ G+ + H ++HRDLK N+L+ N D LK+ DFGLA
Sbjct: 118 DSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLI-----NSD---GALKLADFGLA 166
Query: 271 RE----VYKTTHMSAAGTYAWMAPEVIKTS-IFSKASDVWSYGVVLWELLTGE 318
R V TH T + AP+V+ S +S + D+WS G + E++TG+
Sbjct: 167 RAFGIPVRSYTH--EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 83/173 (47%), Gaps = 21/173 (12%)
Query: 153 DENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK--IR 210
DE I +E LL H NIVSLI V L LV E+ L +VL K ++
Sbjct: 59 DEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKD-LKKVLDENKTGLQ 117
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
+ + Q+ G+ + H ++HRDLK N+L+ N D LK+ DFGLA
Sbjct: 118 DSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLI-----NSD---GALKLADFGLA 166
Query: 271 RE----VYKTTHMSAAGTYAWMAPEVIKTS-IFSKASDVWSYGVVLWELLTGE 318
R V TH T + AP+V+ S +S + D+WS G + E++TG+
Sbjct: 167 RAFGIPVRSYTH--EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 20/187 (10%)
Query: 146 KVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL------CLVMEYARGGP 199
K++ P ++ + +E LL +H+NI+SL+ V L LVME
Sbjct: 56 KLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN- 114
Query: 200 LNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQF 259
L +V+ ++ + + Q+ G+ +LH +IHRDLK SN+++
Sbjct: 115 LCQVI-HMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDC------- 163
Query: 260 KTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGE 318
TLKI DFGLAR M+ T + APEVI ++ D+WS G ++ EL+ G
Sbjct: 164 -TLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGC 222
Query: 319 IPYKSIN 325
+ ++ +
Sbjct: 223 VIFQGTD 229
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 167 LWLFDHRNIVSLIGVCLQS-----PKLCLVMEYAR---GGPLNRVLAGRKIRPDVLVDWA 218
L F+H N+V L VC S KL LV E+ L++V + + + D
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV-PEPGVPTETIKDMM 126
Query: 219 IQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR-EVYKTT 277
Q+ G+++LH ++HRDLK N+L++ + +K+ DFGLAR ++
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQ--------IKLADFGLARIYSFQMA 175
Query: 278 HMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELL 315
S T + APEV+ S ++ D+WS G + E+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 167 LWLFDHRNIVSLIGVCLQS-----PKLCLVMEYAR---GGPLNRVLAGRKIRPDVLVDWA 218
L F+H N+V L VC S KL LV E+ L++V + + + D
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV-PEPGVPTETIKDMM 126
Query: 219 IQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR-EVYKTT 277
Q+ G+++LH ++HRDLK N+L++ + +K+ DFGLAR ++
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQ--------IKLADFGLARIYSFQMA 175
Query: 278 HMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELL 315
S T + APEV+ S ++ D+WS G + E+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 73/159 (45%), Gaps = 23/159 (14%)
Query: 167 LWLFDHRNIVSLIGVCLQSP-----KLCLVMEYARGGPLNRVLAGRKIRP----DVLVDW 217
L F+H N+V L+ VC S K+ LV E+ R + P + + D
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD--LRTYLDKAPPPGLPAETIKDL 125
Query: 218 AIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR-EVYKT 276
Q G+++LH ++HRDLK N+L++ T+K+ DFGLAR Y+
Sbjct: 126 MRQFLRGLDFLHANC---IVHRDLKPENILVT--------SGGTVKLADFGLARIYSYQM 174
Query: 277 THMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELL 315
T + APEV+ S ++ D+WS G + E+
Sbjct: 175 ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 101/227 (44%), Gaps = 25/227 (11%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL----- 188
Y I E+ K++ P ++ + +E L+ +H+NI+ L+ V L
Sbjct: 44 YDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 103
Query: 189 -CLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+VME L +V+ ++ + + Q+ G+ +LH +IHRDLK SN++
Sbjct: 104 VYIVMELMDAN-LCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIV 158
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMS-AAGTYAWMAPEVIKTSIFSKASDVWS 306
+ TLKI DFGLAR + M T + APEVI + + D+WS
Sbjct: 159 VKSDC--------TLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWS 210
Query: 307 YGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTL 353
G ++ E++ +I + + NK+ + + CP+ K L
Sbjct: 211 VGCIMGEMVCHKILFPGRD-----YIDQWNKVIEQLGTPCPEFMKKL 252
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 31/167 (18%)
Query: 168 WLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAI--QIAEGM 225
WL + RN V + + L + MEY L ++ + W + QI E +
Sbjct: 71 WL-ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 226 NYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM------ 279
+Y+H Q +IHRDLK N+ + E + +KI DFGLA+ V+++ +
Sbjct: 130 SYIHSQG---IIHRDLKPMNIFIDES--------RNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 280 ----------SAAGTYAWMAPEVIK-TSIFSKASDVWSYGVVLWELL 315
SA GT ++A EV+ T +++ D++S G++ +E++
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 18/184 (9%)
Query: 143 VAIK-VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLN 201
VA+K V + DE + + +E LL H+NIV L V KL LV E+ L
Sbjct: 30 VALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQD-LK 88
Query: 202 RVL--AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQF 259
+ + P+++ + Q+ +G+ + H + +++HRDLK N+L++ E
Sbjct: 89 KYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGE------ 139
Query: 260 KTLKITDFGLAREV-YKTTHMSAAGTYAWMAPE--VIKTSIFSKASDVWSYGVVLWELLT 316
LK+ DFGLAR SA W P + ++S + D+WS G + EL
Sbjct: 140 --LKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAN 197
Query: 317 GEIP 320
P
Sbjct: 198 AARP 201
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 25/227 (11%)
Query: 134 YKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKL----- 188
Y I E+ K++ P ++ + +E L+ +H+NI+ L+ V L
Sbjct: 44 YDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 103
Query: 189 -CLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVL 247
+VME L +V+ ++ + + Q+ G+ +LH +IHRDLK SN++
Sbjct: 104 VYIVMELMDAN-LCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIV 158
Query: 248 LSEPIENEDLQFKTLKITDFGLAREVYKTTHMS-AAGTYAWMAPEVIKTSIFSKASDVWS 306
+ TLKI DFGLAR + M T + APEVI + + D+WS
Sbjct: 159 VKSDC--------TLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWS 210
Query: 307 YGVVLWELLTGEIPYKSINXXXXXXXXXXNKLTLPIPSTCPQLFKTL 353
G ++ E++ +I + + NK+ + + CP K L
Sbjct: 211 VGCIMGEMVCHKILFPGRD-----YIDQWNKVIEQLGTPCPAFMKKL 252
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGR-KIRPD 212
E + +++E ++ H NI+ + ++ L++E+A G L + L +
Sbjct: 55 EGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQ 114
Query: 213 VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE 272
+ ++A+ ++Y H + +IHRD+K N+L+ E LKI DFG +
Sbjct: 115 RSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGE--------LKIADFGWSVH 163
Query: 273 VYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKS 323
GT ++ PE+I+ + D+W GV+ +E L G P+ S
Sbjct: 164 APSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGR-KIRPD 212
E + +++E ++ H NI+ + ++ L++E+A G L + L +
Sbjct: 56 EGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQ 115
Query: 213 VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE 272
+ ++A+ ++Y H + +IHRD+K N+L+ E LKI DFG +
Sbjct: 116 RSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGE--------LKIADFGWSVH 164
Query: 273 VYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKS 323
GT ++ PE+I+ + D+W GV+ +E L G P+ S
Sbjct: 165 APSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 215
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGR-KIRPD 212
E + +++E ++ H NI+ + ++ L++E+A G L + L +
Sbjct: 55 EGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQ 114
Query: 213 VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE 272
+ ++A+ ++Y H + +IHRD+K N+L+ E LKI DFG +
Sbjct: 115 RSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGE--------LKIADFGWSVH 163
Query: 273 VYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKS 323
GT ++ PE+I+ + D+W GV+ +E L G P+ S
Sbjct: 164 APSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 163 EGKLLWLFDHRNIVSLIGVCLQ--SPKLCLVMEYARGGPLNRVLA-GRKIRPDVLVDWAI 219
E LL H NIV + + L +VMEY GG L V+ G K R + ++ +
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 220 QIAEGMN------YLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV 273
++ + + +++HRDLK +NV L + +K+ DFGLAR +
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK--------QNVKLGDFGLARIL 166
Query: 274 YKTTHMSA--AGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXXXX 331
+ GT +M+PE + +++ SD+WS G +L+EL P+ + +
Sbjct: 167 NHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAG 226
Query: 332 XXXXNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILK 373
K IP ++ + RPS + IL+
Sbjct: 227 KIREGKFR-RIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 20/170 (11%)
Query: 159 NVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGR--KIRPDVLVD 216
VK E ++ H +++L ++ L++E+ GG L +A K+ +++
Sbjct: 94 TVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVIN 153
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR----- 271
+ Q EG+ ++H S++H D+K N++ E + ++KI DFGLA
Sbjct: 154 YMRQACEGLKHMHEH---SIVHLDIKPENIMC------ETKKASSVKIIDFGLATKLNPD 204
Query: 272 EVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
E+ K T T + APE++ +D+W+ GV+ + LL+G P+
Sbjct: 205 EIVKVT----TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPF 250
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 31/204 (15%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCL----QSPK 187
+V++G ++ + VA+K+ +++ + ++ H NI+ I + S +
Sbjct: 23 EVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVM--LRHENILGFIASDMTSRHSSTQ 80
Query: 188 LCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLH-----CQAPISLIHRDLK 242
L L+ Y G L L + + + IA G+ +LH Q ++ HRDLK
Sbjct: 81 LWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLK 140
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM------SAAGTYAWMAPEVIKTS 296
S N+L+ + + I D GLA ++T+ GT +MAPEV+ +
Sbjct: 141 SKNILVKKNGQ--------CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 192
Query: 297 I------FSKASDVWSYGVVLWEL 314
I K D+W++G+VLWE+
Sbjct: 193 IQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 85/185 (45%), Gaps = 43/185 (23%)
Query: 160 VKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVD--- 216
VK GK ++ +DH +CL+ E G L ++ + D
Sbjct: 99 VKYHGKFMY-YDH---------------MCLIFE-PLGPSLYEIITRNNYNGFHIEDIKL 141
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ-------------FKT-- 261
+ I+I + +NYL +SL H DLK N+LL +P + L ++T
Sbjct: 142 YCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKS 198
Query: 262 --LKITDFGLAREVYKTT-HMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGE 318
+K+ DFG A +K+ H S T + APEVI + +SD+WS+G VL EL TG
Sbjct: 199 TGIKLIDFGCA--TFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGS 256
Query: 319 IPYKS 323
+ +++
Sbjct: 257 LLFRT 261
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 31/204 (15%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCL----QSPK 187
+V++G ++ + VA+K+ +++ + ++ H NI+ I + S +
Sbjct: 23 EVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVM--LRHENILGFIASDMTSRHSSTQ 80
Query: 188 LCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLH-----CQAPISLIHRDLK 242
L L+ Y G L L + + + IA G+ +LH Q ++ HRDLK
Sbjct: 81 LWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLK 140
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM------SAAGTYAWMAPEVIKTS 296
S N+L+ + + I D GLA ++T+ GT +MAPEV+ +
Sbjct: 141 SKNILVKKNGQ--------CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 192
Query: 297 I------FSKASDVWSYGVVLWEL 314
I K D+W++G+VLWE+
Sbjct: 193 IQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 31/204 (15%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCL----QSPK 187
+V++G ++ + VA+K+ +++ + ++ H NI+ I + S +
Sbjct: 52 EVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVM--LRHENILGFIASDMTSRHSSTQ 109
Query: 188 LCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLH-----CQAPISLIHRDLK 242
L L+ Y G L L + + + IA G+ +LH Q ++ HRDLK
Sbjct: 110 LWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLK 169
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM------SAAGTYAWMAPEVIKTS 296
S N+L+ + + I D GLA ++T+ GT +MAPEV+ +
Sbjct: 170 SKNILVKKNGQ--------CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 221
Query: 297 I------FSKASDVWSYGVVLWEL 314
I K D+W++G+VLWE+
Sbjct: 222 IQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 141 QEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC------LVMEY 194
++VAIK E E +++ +H N+VS V KL L MEY
Sbjct: 41 EQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEY 100
Query: 195 ARGGPLNRVL------AGRKIRP--DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNV 246
GG L + L G K P +L D I+ + YLH +IHRDLK N+
Sbjct: 101 CEGGDLRKYLNQFENCCGLKEGPIRTLLSD----ISSALRYLH---ENRIIHRDLKPENI 153
Query: 247 LLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVW 305
+L Q KI D G A+E+ + + GT ++APE+++ ++ D W
Sbjct: 154 VL-----QPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYW 208
Query: 306 SYGVVLWELLTGEIPY 321
S+G + +E +TG P+
Sbjct: 209 SFGTLAFECITGFRPF 224
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 90/188 (47%), Gaps = 27/188 (14%)
Query: 153 DENILENVKQEGKLLWLFDHRNIVSL--IGVCLQSP---KLCLVMEYARGGPLNRVLAGR 207
D + + V +E +LL F H NI+ L I V + P KL LV E R L +V+ +
Sbjct: 69 DSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTD-LAQVIHDQ 127
Query: 208 KI--RPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKIT 265
+I P + + I G++ LH ++HRDL N+LL+ +N D + I
Sbjct: 128 RIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLA---DNND-----ITIC 176
Query: 266 DFGLAREVYKTTHMSAAGTYAWM-APE-VIKTSIFSKASDVWSYGVVLWE------LLTG 317
DF LARE + + T+ W APE V++ F+K D+WS G V+ E L G
Sbjct: 177 DFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRG 236
Query: 318 EIPYKSIN 325
Y +N
Sbjct: 237 STFYNQLN 244
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 90/188 (47%), Gaps = 27/188 (14%)
Query: 153 DENILENVKQEGKLLWLFDHRNIVSL--IGVCLQSP---KLCLVMEYARGGPLNRVLAGR 207
D + + V +E +LL F H NI+ L I V + P KL LV E R L +V+ +
Sbjct: 69 DSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTD-LAQVIHDQ 127
Query: 208 KI--RPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKIT 265
+I P + + I G++ LH ++HRDL N+LL+ +N D + I
Sbjct: 128 RIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLA---DNND-----ITIC 176
Query: 266 DFGLAREVYKTTHMSAAGTYAWM-APE-VIKTSIFSKASDVWSYGVVLWE------LLTG 317
DF LARE + + T+ W APE V++ F+K D+WS G V+ E L G
Sbjct: 177 DFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRG 236
Query: 318 EIPYKSIN 325
Y +N
Sbjct: 237 STFYNQLN 244
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 141 QEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLC------LVMEY 194
++VAIK E E +++ +H N+VS V KL L MEY
Sbjct: 40 EQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEY 99
Query: 195 ARGGPLNRVL------AGRKIRP--DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNV 246
GG L + L G K P +L D I+ + YLH +IHRDLK N+
Sbjct: 100 CEGGDLRKYLNQFENCCGLKEGPIRTLLSD----ISSALRYLH---ENRIIHRDLKPENI 152
Query: 247 LLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSIFSKASDVW 305
+L Q KI D G A+E+ + + GT ++APE+++ ++ D W
Sbjct: 153 VL-----QPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYW 207
Query: 306 SYGVVLWELLTGEIPY 321
S+G + +E +TG P+
Sbjct: 208 SFGTLAFECITGFRPF 223
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 88/192 (45%), Gaps = 19/192 (9%)
Query: 133 VYKGIYEKQE--VAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCL 190
VYKG + + VA+K +E +E LL H NIV+L + L L
Sbjct: 18 VYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTL 77
Query: 191 VMEYARGGPLNRVL--AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLL 248
V EY L + L G I + + Q+ G+ Y H Q ++HRDLK N+L+
Sbjct: 78 VFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLI 133
Query: 249 SEPIENEDLQFKTLKITDFGLAR--EVYKTTHMSAAGTYAWMAPEVIKTSI-FSKASDVW 305
+E E LK+ DFGLAR + T+ + T + P+++ S +S D+W
Sbjct: 134 NERGE--------LKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMW 185
Query: 306 SYGVVLWELLTG 317
G + +E+ TG
Sbjct: 186 GVGCIFYEMATG 197
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIP 101
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+++ H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 102 LPLIKSYLFQLLQGLSFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLA 150
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 151 RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 56/95 (58%), Gaps = 15/95 (15%)
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM-SAAGTYAWMAPEV 292
++++HRDLK N+LL + + +K+TDFG + ++ + S GT +++APE+
Sbjct: 143 LNIVHRDLKPENILLDDDM--------NIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEI 194
Query: 293 IKTSI------FSKASDVWSYGVVLWELLTGEIPY 321
I+ S+ + K D+WS GV+++ LL G P+
Sbjct: 195 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 91/182 (50%), Gaps = 16/182 (8%)
Query: 141 QEVAIKVAHPNPDENILENVK-QEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGP 199
Q VAIK + D+ +++ + +E ++L H N+V+L+ V + +L LV EY
Sbjct: 29 QIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTV 88
Query: 200 LNRVLAGRKIRPDVLVDWAI-QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
L+ + ++ P+ LV Q + +N+ H + IHRD+K N+L++ +
Sbjct: 89 LHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILIT--------K 137
Query: 259 FKTLKITDFGLAREVYKTT--HMSAAGTYAWMAPE-VIKTSIFSKASDVWSYGVVLWELL 315
+K+ DFG AR + + + T + +PE ++ + + DVW+ G V ELL
Sbjct: 138 HSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELL 197
Query: 316 TG 317
+G
Sbjct: 198 SG 199
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 18/184 (9%)
Query: 143 VAIK-VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLN 201
VA+K V + DE + + +E LL H+NIV L V KL LV E+ L
Sbjct: 30 VALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQD-LK 88
Query: 202 RVL--AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQF 259
+ + P+++ + Q+ +G+ + H + +++HRDLK N+L++ E
Sbjct: 89 KYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGE------ 139
Query: 260 KTLKITDFGLAREV-YKTTHMSAAGTYAWMAPE--VIKTSIFSKASDVWSYGVVLWELLT 316
LK+ +FGLAR SA W P + ++S + D+WS G + EL
Sbjct: 140 --LKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAN 197
Query: 317 GEIP 320
P
Sbjct: 198 AGRP 201
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 47 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIP 105
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 106 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLA 154
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 155 RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 79/166 (47%), Gaps = 30/166 (18%)
Query: 172 HRNIVSLIGVCLQSPK----LCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNY 227
H NI+ IG + L L+ + G L+ L + + L A +A G+ Y
Sbjct: 77 HENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAY 136
Query: 228 LHCQAPI-------SLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR--EVYKT-- 276
LH P ++ HRD+KS NVLL + T I DFGLA E K+
Sbjct: 137 LHEDIPGLKDGHKPAISHRDIKSKNVLLKNNL--------TACIADFGLALKFEAGKSAG 188
Query: 277 -THMSAAGTYAWMAPEVIKTSI-FSKAS----DVWSYGVVLWELLT 316
TH GT +MAPEV++ +I F + + D+++ G+VLWEL +
Sbjct: 189 DTH-GQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 45 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIP 103
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 104 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLA 152
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 153 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIP 101
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 102 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLA 150
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 151 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 50 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIP 108
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 109 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLA 157
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 158 RAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIP 101
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 102 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLA 150
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 151 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 47 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIP 105
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 106 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLA 154
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 155 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 45 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIP 103
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 104 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTE--------GAIKLADFGLA 152
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 153 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 44 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIP 102
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 103 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLA 151
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 152 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 50 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIP 108
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 109 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLA 157
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 158 RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 46 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIP 104
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 105 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLA 153
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 154 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 45 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIP 103
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 104 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLA 152
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 153 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 46 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIP 104
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 105 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLA 153
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 154 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIP 101
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 102 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLA 150
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 151 RAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 84/188 (44%), Gaps = 41/188 (21%)
Query: 158 ENVKQEGKLLWLFDHRNIVSLIGVCLQ----------SPKLCLV--MEYARGGPLNRVLA 205
E V +E K L +H IV L+ SPK+ L M+ R L +
Sbjct: 48 EKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMN 107
Query: 206 GR----KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKT 261
GR + V + +QIAE + +LH + L+HRDLK SN+ + +D+
Sbjct: 108 GRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFT----MDDV---- 156
Query: 262 LKITDFGLAREVYK--------------TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSY 307
+K+ DFGL + + H GT +M+PE I + +S D++S
Sbjct: 157 VKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSL 216
Query: 308 GVVLWELL 315
G++L+ELL
Sbjct: 217 GLILFELL 224
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIP 101
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 102 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLA 150
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 151 RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIP 101
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 102 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLA 150
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 151 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 42 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIP 100
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 101 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLA 149
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 150 RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 44 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIP 102
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 103 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTE--------GAIKLADFGLA 151
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 152 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 42 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIP 100
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 101 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLA 149
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 150 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 42 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIP 100
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 101 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLA 149
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 150 RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 44 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIP 102
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 103 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLA 151
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 152 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 44 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIP 102
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 103 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLA 151
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 152 RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIP 101
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 102 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLA 150
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 151 RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 42 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIP 100
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 101 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLA 149
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 150 RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIP 101
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 102 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLA 150
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 151 RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 42 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIP 100
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 101 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLA 149
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 150 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 160 VKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARG-GPLNRV-LAGRKIRPDVLVDW 217
VK+E +L + HRNI+ L +L ++ E+ G R+ + ++ +V +
Sbjct: 48 VKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSY 107
Query: 218 AIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT 277
Q+ E + +LH ++ H D++ N++ + + T+KI +FG AR++
Sbjct: 108 VHQVCEALQFLHSH---NIGHFDIRPENIIY------QTRRSSTIKIIEFGQARQLKPGD 158
Query: 278 HMSAAGTY-AWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
+ T + APEV + + S A+D+WS G +++ LL+G P+
Sbjct: 159 NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPF 203
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIP 101
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 102 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLA 150
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 151 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 46 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKKFMDASALTGIP 104
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 105 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTE--------GAIKLADFGLA 153
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 154 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 15/95 (15%)
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM-SAAGTYAWMAPEV 292
++++HRDLK N+LL + + +K+TDFG + ++ + GT +++APE+
Sbjct: 130 LNIVHRDLKPENILLDDDM--------NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEI 181
Query: 293 IKTSI------FSKASDVWSYGVVLWELLTGEIPY 321
I+ S+ + K D+WS GV+++ LL G P+
Sbjct: 182 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 44 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKKFMDASALTGIP 102
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 103 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTE--------GAIKLADFGLA 151
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 152 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 16/168 (9%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG--RKIRP 211
E + +E LL +H NIV L+ V KL LV E+ + + A I
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPL 102
Query: 212 DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR 271
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLAR
Sbjct: 103 PLIKSYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTE--------GAIKLADFGLAR 151
Query: 272 E--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 152 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 25/111 (22%)
Query: 219 IQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK--- 275
IQIAE + +LH + L+HRDLK SN+ + +D+ +K+ DFGL + +
Sbjct: 171 IQIAEAVEFLHSKG---LMHRDLKPSNIFFT----MDDV----VKVGDFGLVTAMDQDEE 219
Query: 276 -----------TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELL 315
TH GT +M+PE I + +S D++S G++L+ELL
Sbjct: 220 EQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 81/179 (45%), Gaps = 21/179 (11%)
Query: 146 KVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL- 204
K+ DE I +E +L H NIV L V +L LV E+ L ++L
Sbjct: 33 KIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLD 91
Query: 205 -AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLK 263
+ + +Q+ G+ Y H + ++HRDLK N+L++ E LK
Sbjct: 92 VCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGE--------LK 140
Query: 264 ITDFGLARE----VYKTTHMSAAGTYAWMAPEVIKTS-IFSKASDVWSYGVVLWELLTG 317
I DFGLAR V K TH T + AP+V+ S +S D+WS G + E++ G
Sbjct: 141 IADFGLARAFGIPVRKYTHEVV--TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 81/179 (45%), Gaps = 21/179 (11%)
Query: 146 KVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL- 204
K+ DE I +E +L H NIV L V +L LV E+ L ++L
Sbjct: 33 KIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLD 91
Query: 205 -AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLK 263
+ + +Q+ G+ Y H + ++HRDLK N+L++ E LK
Sbjct: 92 VCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGE--------LK 140
Query: 264 ITDFGLARE----VYKTTHMSAAGTYAWMAPEVIKTS-IFSKASDVWSYGVVLWELLTG 317
I DFGLAR V K TH T + AP+V+ S +S D+WS G + E++ G
Sbjct: 141 IADFGLARAFGIPVRKYTHEVV--TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 15/95 (15%)
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM-SAAGTYAWMAPEV 292
++++HRDLK N+LL + + +K+TDFG + ++ + GT +++APE+
Sbjct: 143 LNIVHRDLKPENILLDDDM--------NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEI 194
Query: 293 IKTSI------FSKASDVWSYGVVLWELLTGEIPY 321
I+ S+ + K D+WS GV+++ LL G P+
Sbjct: 195 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG--PLNRVLAGRKIRP 211
E + +E LL +H NIV L+ V KL LV E+ A I
Sbjct: 46 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPL 105
Query: 212 DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR 271
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLAR
Sbjct: 106 PLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLAR 154
Query: 272 E--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 155 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGR----KI 209
E + +++E ++ H NI+ L ++ L++EYA G L + L +
Sbjct: 64 EGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQ 123
Query: 210 RPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGL 269
R +++ ++A+ + Y H + +IHRD+K N+LL LKI DFG
Sbjct: 124 RTATIME---ELADALMYCHGK---KVIHRDIKPENLLLG--------LKGELKIADFGW 169
Query: 270 AREVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINXXXX 329
+ + GT ++ PE+I+ + ++ D+W GV+ +ELL G P++S +
Sbjct: 170 SVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNET 229
Query: 330 XXXXXXNKLTLP--IPSTCPQLFKTLM 354
L P +P+ L L+
Sbjct: 230 YRRIVKVDLKFPASVPTGAQDLISKLL 256
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIR 210
E + +E LL +H NIV L+ V KL LV E+ L + + A I
Sbjct: 46 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQD-LKKFMDASALTGIP 104
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLA
Sbjct: 105 LPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLA 153
Query: 271 RE--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
R V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 154 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGG--PLNRVLAGRKIRP 211
E + +E LL +H NIV L+ V KL LV E+ A I
Sbjct: 42 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPL 101
Query: 212 DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR 271
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLAR
Sbjct: 102 PLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLAR 150
Query: 272 E--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 151 AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 81/179 (45%), Gaps = 21/179 (11%)
Query: 146 KVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL- 204
K+ DE I +E +L H NIV L V +L LV E+ L ++L
Sbjct: 33 KIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLD 91
Query: 205 -AGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLK 263
+ + +Q+ G+ Y H + ++HRDLK N+L++ E LK
Sbjct: 92 VCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGE--------LK 140
Query: 264 ITDFGLARE----VYKTTHMSAAGTYAWMAPEVIKTS-IFSKASDVWSYGVVLWELLTG 317
I DFGLAR V K TH T + AP+V+ S +S D+WS G + E++ G
Sbjct: 141 IADFGLARAFGIPVRKYTHEIV--TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 75/176 (42%), Gaps = 30/176 (17%)
Query: 206 GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKIT 265
G+ I D+L A+ I + + +LH + +S+IHRD+K SNVL++ +K
Sbjct: 130 GQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLIN--------ALGQVKXC 179
Query: 266 DFGLAREVYKTTHMSA-AGTYAWMAPEVIKTSI----FSKASDVWSYGVVLWELLTGEIP 320
DFG++ + AG + APE I + +S SD+WS G+ EL P
Sbjct: 180 DFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFP 239
Query: 321 YKSINXXXXXXXXXXNKLTLPIPSTCPQL--------FKTLMEACWEADSHMRPSF 368
Y S +L + PQL F C + +S RP++
Sbjct: 240 YDSWG-------TPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTY 288
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 16/168 (9%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG--RKIRP 211
E + +E LL +H NIV L+ V KL LV E+ + + A I
Sbjct: 46 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPL 105
Query: 212 DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR 271
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLAR
Sbjct: 106 PLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLAR 154
Query: 272 E--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 155 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 16/168 (9%)
Query: 154 ENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG--RKIRP 211
E + +E LL +H NIV L+ V KL LV E+ + + A I
Sbjct: 45 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPL 104
Query: 212 DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR 271
++ + Q+ +G+ + H ++HRDLK N+L++ +K+ DFGLAR
Sbjct: 105 PLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLAR 153
Query: 272 E--VYKTTHMSAAGTYAWMAPEV-IKTSIFSKASDVWSYGVVLWELLT 316
V T+ T + APE+ + +S A D+WS G + E++T
Sbjct: 154 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 41/205 (20%)
Query: 141 QEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL 200
+E A+K+ + ++ L ++NI+ LI + LV E +GG +
Sbjct: 39 KEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSI 98
Query: 201 ----------NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSE 250
N A R +R +A +++LH + + HRDLK N+L
Sbjct: 99 LAHIQKQKHFNEREASRVVR---------DVAAALDFLHTKG---IAHRDLKPENILCES 146
Query: 251 PIENEDLQFKTLKITDFGLAREVYKTTHMSA---------AGTYAWMAPEVI-----KTS 296
P + +KI DF L + + G+ +MAPEV+ + +
Sbjct: 147 P-----EKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQAT 201
Query: 297 IFSKASDVWSYGVVLWELLTGEIPY 321
+ K D+WS GVVL+ +L+G P+
Sbjct: 202 FYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 31/167 (18%)
Query: 172 HRNIVSLIGVCLQSP----KLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNY 227
H N++ I + +L L+ + G L L G I + L A ++ G++Y
Sbjct: 68 HENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSY 127
Query: 228 LHCQAPI--------SLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY----- 274
LH P S+ HRD KS NVLL + T + DFGLA
Sbjct: 128 LHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDL--------TAVLADFGLAVRFEPGKPP 179
Query: 275 KTTHMSAAGTYAWMAPEVIKTSI-FSKAS----DVWSYGVVLWELLT 316
TH GT +MAPEV++ +I F + + D+++ G+VLWEL++
Sbjct: 180 GDTH-GQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 119/295 (40%), Gaps = 51/295 (17%)
Query: 132 KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSP----K 187
+V+ G + ++VA+KV + + + +L H NI+ I ++ +
Sbjct: 52 EVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVL--MRHENILGFIAADIKGTGSWTQ 109
Query: 188 LCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHC-----QAPISLIHRDLK 242
L L+ +Y G L L + ++ A G+ +LH Q ++ HRDLK
Sbjct: 110 LYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLK 169
Query: 243 SSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTH------MSAAGTYAWMAPEVIKTS 296
S N+L+ + T I D GLA + T+ + GT +M PEV+ S
Sbjct: 170 SKNILVKKN--------GTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDES 221
Query: 297 IFSK------ASDVWSYGVVLWEL----LTG------EIPYKSI-----NXXXXXXXXXX 335
+ +D++S+G++LWE+ ++G ++PY + +
Sbjct: 222 LNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCI 281
Query: 336 NKLTLPIPS-----TCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQ 385
KL P+ C + LM CW + R + + K L + S+ I+
Sbjct: 282 KKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDIK 336
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 40/262 (15%)
Query: 133 VYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFD-HRNIVSLIGVCLQSPK---- 187
VY+G+++ ++VA+K P +E +LL D H N++ C + +
Sbjct: 41 VYRGMFDNRDVAVKRILPE----CFSFADREVQLLRESDEHPNVIRYF--CTEKDRQFQY 94
Query: 188 ----LC--LVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDL 241
LC + EY + A + P L+ Q G+ +LH ++++HRDL
Sbjct: 95 IAIELCAATLQEYVE----QKDFAHLGLEPITLLQ---QTTSGLAHLH---SLNIVHRDL 144
Query: 242 KSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTH-----MSAAGTYAWMAPEVIKTS 296
K N+L+S P N + K + I+DFGL +++ H GT W+APE++
Sbjct: 145 KPHNILISMP--NAHGKIKAM-ISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSED 201
Query: 297 IFSKAS---DVWSYGVVLWELLT-GEIPY-KSINXXXXXXXXXXNKLTLPIPSTCPQLFK 351
+ D++S G V + +++ G P+ KS+ + L + +
Sbjct: 202 CKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIAR 261
Query: 352 TLMEACWEADSHMRPSFKTILK 373
L+E D RPS K +LK
Sbjct: 262 ELIEKMIAMDPQKRPSAKHVLK 283
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 19/153 (12%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 122 QVLEAVRHCH---NCGVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 171
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKL 338
GT + PE I+ + +++ VWS G++L++++ G+IP++ ++
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV 231
Query: 339 TLPIPSTCPQLFKTLMEACWEADSHMRPSFKTI 371
+ S C + L+ C RP+F+ I
Sbjct: 232 S----SEC----QHLIRWCLALRPSDRPTFEEI 256
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 137 QVLEAVRHCH---NCGVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 186
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYK 322
GT + PE I+ + +++ VWS G++L++++ G+IP++
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 19/153 (12%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 121 QVLEAVRHCH---NCGVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 170
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKL 338
GT + PE I+ + +++ VWS G++L++++ G+IP++ ++
Sbjct: 171 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV 230
Query: 339 TLPIPSTCPQLFKTLMEACWEADSHMRPSFKTI 371
+ S C + L+ C RP+F+ I
Sbjct: 231 S----SEC----QHLIRWCLALRPSDRPTFEEI 255
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 138 QVLEAVRHCH---NCGVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 187
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKL 338
GT + PE I+ + +++ VWS G++L++++ G+IP++ ++
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV 247
Query: 339 TLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHI 393
+ S C L + + +RPS + + + N + + P E+ I
Sbjct: 248 S----SECQHLIRWCLA--------LRPSDRPTFEEIQNHPWMQDVLLPQETAEI 290
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 138 QVLEAVRHCH---NCGVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 187
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYK 322
GT + PE I+ + +++ VWS G++L++++ G+IP++
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 165 QVLEAVRHCH---NCGVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 214
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYK 322
GT + PE I+ + +++ VWS G++L++++ G+IP++
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 138 QVLEAVRHCH---NCGVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 187
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYK 322
GT + PE I+ + +++ VWS G++L++++ G+IP++
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 137 QVLEAVRHCH---NCGVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 186
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYK 322
GT + PE I+ + +++ VWS G++L++++ G+IP++
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 157 QVLEAVRHCH---NCGVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 206
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYK 322
GT + PE I+ + +++ VWS G++L++++ G+IP++
Sbjct: 207 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 250
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 30/180 (16%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL--CLVMEYARGGPLNRVL---AGRKIRPD---- 212
+E ++L +H+NIV L + ++ L+ME+ G L VL + P+
Sbjct: 56 REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFL 115
Query: 213 -VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR 271
VL D + GMN+L ++HR++K N++ + ED Q K+TDFG AR
Sbjct: 116 IVLRD----VVGGMNHLRENG---IVHRNIKPGNIM---RVIGEDGQ-SVYKLTDFGAAR 164
Query: 272 EVYKTTH-MSAAGTYAWMAPEVIKTSIFSK--------ASDVWSYGVVLWELLTGEIPYK 322
E+ +S GT ++ P++ + ++ K D+WS GV + TG +P++
Sbjct: 165 ELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 150 QVLEAVRHCH---NCGVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 199
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYK 322
GT + PE I+ + +++ VWS G++L++++ G+IP++
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 150 QVLEAVRHCH---NCGVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 199
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYK 322
GT + PE I+ + +++ VWS G++L++++ G+IP++
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 19/153 (12%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 122 QVLEAVRHCH---NCGVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 171
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKL 338
GT + PE I+ + +++ VWS G++L++++ G+IP++ ++
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV 231
Query: 339 TLPIPSTCPQLFKTLMEACWEADSHMRPSFKTI 371
+ S C + L+ C RP+F+ I
Sbjct: 232 S----SEC----QHLIRWCLALRPSDRPTFEEI 256
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 19/153 (12%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 118 QVLEAVRHCH---NCGVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 167
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKL 338
GT + PE I+ + +++ VWS G++L++++ G+IP++ ++
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV 227
Query: 339 TLPIPSTCPQLFKTLMEACWEADSHMRPSFKTI 371
+ S C + L+ C RP+F+ I
Sbjct: 228 S----SEC----QHLIRWCLALRPSDRPTFEEI 252
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 151 QVLEAVRHCH---NCGVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 200
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYK 322
GT + PE I+ + +++ VWS G++L++++ G+IP++
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 150 QVLEAVRHCH---NCGVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 199
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYK 322
GT + PE I+ + +++ VWS G++L++++ G+IP++
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 165 QVLEAVRHCH---NCGVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 214
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYK 322
GT + PE I+ + +++ VWS G++L++++ G+IP++
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 170 QVLEAVRHCH---NCGVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 219
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYK 322
GT + PE I+ + +++ VWS G++L++++ G+IP++
Sbjct: 220 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 263
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 19/153 (12%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 123 QVLEAVRHCH---NCGVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 172
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKL 338
GT + PE I+ + +++ VWS G++L++++ G+IP++ ++
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV 232
Query: 339 TLPIPSTCPQLFKTLMEACWEADSHMRPSFKTI 371
+ S C + L+ C RP+F+ I
Sbjct: 233 S----SEC----QHLIRWCLALRPSDRPTFEEI 257
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 19/153 (12%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 123 QVLEAVRHCH---NCGVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 172
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKL 338
GT + PE I+ + +++ VWS G++L++++ G+IP++ ++
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV 232
Query: 339 TLPIPSTCPQLFKTLMEACWEADSHMRPSFKTI 371
+ S C + L+ C RP+F+ I
Sbjct: 233 S----SEC----QHLIRWCLALRPSDRPTFEEI 257
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 151 QVLEAVRHCH---NCGVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 200
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYK 322
GT + PE I+ + +++ VWS G++L++++ G+IP++
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 165 QVLEAVRHCH---NCGVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 214
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYK 322
GT + PE I+ + +++ VWS G++L++++ G+IP++
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 150 QVLEAVRHCH---NCGVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 199
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYK 322
GT + PE I+ + +++ VWS G++L++++ G+IP++
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 151 QVLEAVRHCH---NCGVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 200
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYK 322
GT + PE I+ + +++ VWS G++L++++ G+IP++
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 145 QVLEAVRHCH---NCGVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 194
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYK 322
GT + PE I+ + +++ VWS G++L++++ G+IP++
Sbjct: 195 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 238
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 151 QVLEAVRHCH---NCGVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 200
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYK 322
GT + PE I+ + +++ VWS G++L++++ G+IP++
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 123 QVLEAVRHCH---NCGVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 172
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYK 322
GT + PE I+ + +++ VWS G++L++++ G+IP++
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 11/104 (10%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 118 QVLEAVRHCHNXG---VLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 167
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYK 322
GT + PE I+ + +++ VWS G++L++++ G+IP++
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 19/153 (12%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ E + + H ++HRD+K N+L+ DL LK+ DFG + T +
Sbjct: 118 QVLEAVRHCH---NCGVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYT 167
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKL 338
GT + PE I+ + +++ VWS G++L++++ G+IP++ ++
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRV 227
Query: 339 TLPIPSTCPQLFKTLMEACWEADSHMRPSFKTI 371
+ S C + L+ C RP+F+ I
Sbjct: 228 S----SEC----QHLIRWCLALRPSDRPTFEEI 252
>pdb|1H3H|A Chain A, Structural Basis For Specific Recognition Of An
Rxxk-Containing Slp-76 Peptide By The Gads C-Terminal
Sh3 Domain
Length = 60
Score = 55.8 bits (133), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 9/61 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
RALYD++A+ DEL R G++VEVL S + WWTG++ K+ G+FPAN+V+
Sbjct: 7 RALYDFEALEEDELGFRSGEVVEVLD-----SSNPSWWTGRLHNKL----GLFPANYVAP 57
Query: 96 I 96
+
Sbjct: 58 M 58
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 54/219 (24%)
Query: 133 VYKGIYEKQEVAIKVAHPNPDENIL--ENVKQEGKLLWLFDHRNIVSLIG-----VCLQS 185
VYKG +++ VA+KV +N + +N+ + + L +H NI I
Sbjct: 29 VYKGSLDERPVAVKVFSFANRQNFINEKNIYR----VPLMEHDNIARFIVGDERVTADGR 84
Query: 186 PKLCLVMEYARGGPLNRVLAGRKIRPDVLVDW------AIQIAEGMNYLHCQAPI----- 234
+ LVMEY G L + L+ DW A + G+ YLH + P
Sbjct: 85 MEYLLVMEYYPNGSLXKYLSLHT------SDWVSSCRLAHSVTRGLAYLHTELPRGDHYK 138
Query: 235 -SLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY----------KTTHMSAAG 283
++ HRDL S NVL ++N+ T I+DFGL+ + +S G
Sbjct: 139 PAISHRDLNSRNVL----VKND----GTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVG 190
Query: 284 TYAWMAPEVIKTSI-------FSKASDVWSYGVVLWELL 315
T +MAPEV++ ++ K D+++ G++ WE+
Sbjct: 191 TIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 153 DENILENVKQEGKLLWLFDHRNIVSL--------------IGVCLQSPKLCLVMEYARGG 198
D +++ +E K++ DH NIV + +G + + +V EY
Sbjct: 48 DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETD 107
Query: 199 PLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
N + G + + + Q+ G+ Y+H +++HRDLK +N+ I EDL
Sbjct: 108 LANVLEQGPLLEEHARL-FMYQLLRGLKYIHSA---NVLHRDLKPANLF----INTEDL- 158
Query: 259 FKTLKITDFGLAR----EVYKTTHMSAAGTYAWM-APEVIKT-SIFSKASDVWSYGVVLW 312
LKI DFGLAR H+S W +P ++ + + ++KA D+W+ G +
Sbjct: 159 --VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFA 216
Query: 313 ELLTGE 318
E+LTG+
Sbjct: 217 EMLTGK 222
>pdb|1UTI|A Chain A, MonaGADS SH3C IN COMPLEX WITH HPK DERIVED PEPTIDE
Length = 58
Score = 55.5 bits (132), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 9/61 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
RALYD++A+ DEL R G++VEVL S + WWTG++ K+ G+FPAN+V+
Sbjct: 5 RALYDFEALEEDELGFRSGEVVEVLD-----SSNPSWWTGRLHNKL----GLFPANYVAP 55
Query: 96 I 96
+
Sbjct: 56 M 56
>pdb|1OEB|A Chain A, MonaGADS SH3C DOMAIN
pdb|1OEB|B Chain B, MonaGADS SH3C DOMAIN
pdb|2W10|A Chain A, Mona Sh3c In Complex
pdb|2W10|B Chain B, Mona Sh3c In Complex
Length = 62
Score = 55.5 bits (132), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 9/61 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
RALYD++A+ DEL R G++VEVL S + WWTG++ K+ G+FPAN+V+
Sbjct: 9 RALYDFEALEEDELGFRSGEVVEVLD-----SSNPSWWTGRLHNKL----GLFPANYVAP 59
Query: 96 I 96
+
Sbjct: 60 M 60
>pdb|2D0N|A Chain A, Crystal Structure Of The C-Terminal Sh3 Domain Of The
Adaptor Protein Gads In Complex With Slp-76 Motif
Peptide Reveals A Unique Sh3-Sh3 Interaction
pdb|2D0N|C Chain C, Crystal Structure Of The C-Terminal Sh3 Domain Of The
Adaptor Protein Gads In Complex With Slp-76 Motif
Peptide Reveals A Unique Sh3-Sh3 Interaction
Length = 59
Score = 55.5 bits (132), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 9/61 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
RALYD++A+ DEL R G++VEVL S + WWTG++ K+ G+FPAN+V+
Sbjct: 6 RALYDFEALEEDELGFRSGEVVEVLD-----SSNPSWWTGRLHNKL----GLFPANYVAP 56
Query: 96 I 96
+
Sbjct: 57 M 57
>pdb|2XMF|A Chain A, Myosin 1e Sh3
Length = 60
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 9/61 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
+ALY YDA DELS DI++++ +D + GWWTG++ G K G+FP N+V+
Sbjct: 9 KALYAYDAQDTDELSFNANDIIDIIKEDPS-----GWWTGRLRG----KQGLFPNNYVTK 59
Query: 96 I 96
I
Sbjct: 60 I 60
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 175 IVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRP-DVLVDWAIQIAEGMNYLHCQAP 233
IV L G + P + + ME GG L +++ + P D + + Q EG+ YLH +
Sbjct: 128 IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSR-- 185
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQ--FKTLKITDFGLAREVYKTTHMSAAGTYAWMAPE 291
++H D+K+ NVLLS + L + + GL +++ ++ GT MAPE
Sbjct: 186 -RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIP--GTETHMAPE 242
Query: 292 VIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
V+ DVWS ++ +L G P+
Sbjct: 243 VVLGRSCDAKVDVWSSCCMMLHMLNGCHPW 272
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 18/117 (15%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEP---IENEDLQFKTLK--ITDFGLAREV- 273
QIA G+ +LH + +IHRDLK N+L+S ++ + L+ I+DFGL +++
Sbjct: 141 QIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 197
Query: 274 -----YKTTHMSAAGTYAWMAPEVIKTSI---FSKASDVWSYGVVLWELLT-GEIPY 321
++ + +GT W APE+++ S +++ D++S G V + +L+ G+ P+
Sbjct: 198 SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Query: 175 IVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRP-DVLVDWAIQIAEGMNYLHCQAP 233
IV L G + P + + ME GG L +++ + P D + + Q EG+ YLH +
Sbjct: 147 IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSR-- 204
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQ--FKTLKITDFGLAREVYKTTHMSAAGTYAWMAPE 291
++H D+K+ NVLLS + L + + GL + + ++ GT MAPE
Sbjct: 205 -RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYI--PGTETHMAPE 261
Query: 292 VIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
V+ DVWS ++ +L G P+
Sbjct: 262 VVLGRSCDAKVDVWSSCCMMLHMLNGCHPW 291
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 18/117 (15%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEP---IENEDLQFKTLK--ITDFGLAREV- 273
QIA G+ +LH + +IHRDLK N+L+S ++ + L+ I+DFGL +++
Sbjct: 141 QIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 197
Query: 274 -----YKTTHMSAAGTYAWMAPEVIKTSI---FSKASDVWSYGVVLWELLT-GEIPY 321
++ + +GT W APE+++ S +++ D++S G V + +L+ G+ P+
Sbjct: 198 SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|2DA9|A Chain A, Solution Structure Of The Third Sh3 Domain Of Sh3-Domain
Kinase Binding Protein 1 (Regulator Of Ubiquitous
Kinase, Ruk)
Length = 70
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 7/61 (11%)
Query: 33 DLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANF 92
D + ++ Y+A DEL+++ GDIV +++KD DVGWW G++ G + G+FP NF
Sbjct: 8 DYCKVIFPYEAQNDDELTIKEGDIVTLINKDCI---DVGWWEGELNG----RRGVFPDNF 60
Query: 93 V 93
V
Sbjct: 61 V 61
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 30/180 (16%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKL--CLVMEYARGGPLNRVL---AGRKIRPD---- 212
+E ++L +H+NIV L + ++ L+ME+ G L VL + P+
Sbjct: 56 REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFL 115
Query: 213 -VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR 271
VL D + GMN+L ++HR++K N++ + ED Q K+TDFG AR
Sbjct: 116 IVLRD----VVGGMNHLRENG---IVHRNIKPGNIM---RVIGEDGQ-SVYKLTDFGAAR 164
Query: 272 EVYKTTH-MSAAGTYAWMAPEVIKTSIFSK--------ASDVWSYGVVLWELLTGEIPYK 322
E+ + GT ++ P++ + ++ K D+WS GV + TG +P++
Sbjct: 165 ELEDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 8/151 (5%)
Query: 174 NIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRP-DVLVDWAIQIAEGMNYLHCQA 232
IV L G + P + + ME GG L +++ P D + + Q EG+ YLH +
Sbjct: 127 RIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR- 185
Query: 233 PISLIHRDLKSSNVLLSEPIENEDLQ--FKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
++H D+K+ NVLLS L L + GL + + ++ GT MAP
Sbjct: 186 --RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP--GTETHMAP 241
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
EV+ D+WS ++ +L G P+
Sbjct: 242 EVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 8/150 (5%)
Query: 175 IVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRP-DVLVDWAIQIAEGMNYLHCQAP 233
IV L G + P + + ME GG L +++ P D + + Q EG+ YLH +
Sbjct: 126 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR-- 183
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQ--FKTLKITDFGLAREVYKTTHMSAAGTYAWMAPE 291
++H D+K+ NVLLS L L + GL + + ++ GT MAPE
Sbjct: 184 -RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP--GTETHMAPE 240
Query: 292 VIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
V+ D+WS ++ +L G P+
Sbjct: 241 VVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 8/150 (5%)
Query: 175 IVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRP-DVLVDWAIQIAEGMNYLHCQAP 233
IV L G + P + + ME GG L +++ P D + + Q EG+ YLH +
Sbjct: 112 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR-- 169
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQ--FKTLKITDFGLAREVYKTTHMSAAGTYAWMAPE 291
++H D+K+ NVLLS L L + GL + + ++ GT MAPE
Sbjct: 170 -RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP--GTETHMAPE 226
Query: 292 VIKTSIFSKASDVWSYGVVLWELLTGEIPY 321
V+ D+WS ++ +L G P+
Sbjct: 227 VVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 67/121 (55%), Gaps = 22/121 (18%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEP---IENEDLQFKTLK--ITDFGLAREV- 273
QIA G+ +LH + +IHRDLK N+L+S ++ + L+ I+DFGL +++
Sbjct: 123 QIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
Query: 274 -----YKTTHMSAAGTYAWMAPEVIKTS-------IFSKASDVWSYGVVLWELLT-GEIP 320
++T + +GT W APE+++ S +++ D++S G V + +L+ G+ P
Sbjct: 180 SGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
Query: 321 Y 321
+
Sbjct: 240 F 240
>pdb|2K9G|A Chain A, Solution Structure Of The Third Sh3 Domain Of The Cin85
Adapter Protein
Length = 73
Score = 53.5 bits (127), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 7/68 (10%)
Query: 26 NRRNHRPDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKV 85
+ R D + ++ Y+A DEL+++ GDIV +++KD DVGWW G++ G +
Sbjct: 3 DSRTKSKDYCKVIFPYEAQNDDELTIKEGDIVTLINKDCI---DVGWWEGELNG----RR 55
Query: 86 GIFPANFV 93
G+FP NFV
Sbjct: 56 GVFPDNFV 63
>pdb|3JV3|A Chain A, Structure Of Sh3e-Dh Unit Of Murine Intersectin-1l
pdb|3JV3|B Chain B, Structure Of Sh3e-Dh Unit Of Murine Intersectin-1l
Length = 283
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 9/78 (11%)
Query: 37 ALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSSI 96
+YDY A DEL+ +G I+ VL+K+ D WW G++ G +VG+FP+N+V
Sbjct: 7 GMYDYTAQNDDELAFSKGQIINVLNKE-----DPDWWKGEVSG----QVGLFPSNYVKLT 57
Query: 97 EDINLVSSVINDVKLVEI 114
D++ +D+ L+++
Sbjct: 58 TDMDPSQQWCSDLHLLDM 75
>pdb|2JTE|A Chain A, Third Sh3 Domain Of Cd2ap
pdb|2KRO|A Chain A, Rdc Refined High Resolution Structure Of The Third Sh3
Domain Of Cd2ap
Length = 64
Score = 53.1 bits (126), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 7/61 (11%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
R L+ Y DEL+ R G+I+ ++SK+ +G+ GWW G++ G K G+FP NF
Sbjct: 10 RTLFPYTGTNEDELTFREGEIIHLISKE---TGEAGWWKGELNG----KEGVFPDNFAVQ 62
Query: 96 I 96
I
Sbjct: 63 I 63
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 73/171 (42%), Gaps = 26/171 (15%)
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q+ + + H + ++HRD+K N+L+ DL+ K+ DFG ++ +
Sbjct: 147 QVVAAIQHCHSRG---VVHRDIKDENILI-------DLRRGCAKLIDFGSGALLHDEPYT 196
Query: 280 SAAGTYAWMAPEVIKTSIF-SKASDVWSYGVVLWELLTGEIPYKSINXXXXXXXXXXNKL 338
GT + PE I + + + VWS G++L++++ G+IP++ +
Sbjct: 197 DFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHV 256
Query: 339 TLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQTPHE 389
+ P C L+ C RPS L I+ ++QTP E
Sbjct: 257 S---PDCC-----ALIRRCLAPKPSSRPS-------LEEILLDPWMQTPAE 292
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
+ Q+ + Y+H + HRD+K N+LL D LK+ DFG A+++ +
Sbjct: 161 YMYQLFRSLAYIHS---FGICHRDIKPQNLLL-------DPDTAVLKLCDFGSAKQLVRG 210
Query: 277 -THMSAAGTYAWMAPEVI-KTSIFSKASDVWSYGVVLWELLTGE 318
++S + + APE+I + ++ + DVWS G VL ELL G+
Sbjct: 211 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK- 275
+ Q+ + Y+H + HRD+K N+LL D LK+ DFG A+++ +
Sbjct: 135 YMYQLFRSLAYIHS---FGICHRDIKPQNLLL-------DPDTAVLKLCDFGSAKQLVRG 184
Query: 276 TTHMSAAGTYAWMAPEVI-KTSIFSKASDVWSYGVVLWELLTGE 318
++S + + APE+I + ++ + DVWS G VL ELL G+
Sbjct: 185 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK- 275
+ Q+ + Y+H + HRD+K N+LL D LK+ DFG A+++ +
Sbjct: 146 YMYQLFRSLAYIHS---FGICHRDIKPQNLLL-------DPDTAVLKLCDFGSAKQLVRG 195
Query: 276 TTHMSAAGTYAWMAPEVI-KTSIFSKASDVWSYGVVLWELLTGE 318
++S + + APE+I + ++ + DVWS G VL ELL G+
Sbjct: 196 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 29/192 (15%)
Query: 141 QEVAIKVAHPNPDENILENVKQ---EGKLLWLFDHRNIVSLIGVCLQS------PKLCLV 191
Q+VAIK PN +++ N K+ E K+L F H NI+++ + + + +V
Sbjct: 80 QQVAIKKI-PNAF-DVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVV 137
Query: 192 MEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEP 251
++ + + + + + + + Q+ G+ Y+H +IHRDLK SN+L++E
Sbjct: 138 LDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNEN 194
Query: 252 IENEDLQFKTLKITDFGLAREV------YKTTHMSAAGTYAWMAPEV-IKTSIFSKASDV 304
E LKI DFG+AR + ++ T + APE+ + +++A D+
Sbjct: 195 CE--------LKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDL 246
Query: 305 WSYGVVLWELLT 316
WS G + E+L
Sbjct: 247 WSVGCIFGEMLA 258
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 24/170 (14%)
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPK------LCLVMEYARGGPLNRVLA----GRKIRP 211
+E +++ DH NIV L S + L LV++Y + RV ++ P
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPAT-VYRVARHYSRAKQTLP 120
Query: 212 DVLVD-WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
+ V + Q+ + Y+H + HRD+K N+LL D LK+ DFG A
Sbjct: 121 VIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLL-------DPDTAVLKLCDFGSA 170
Query: 271 REVYKT-THMSAAGTYAWMAPEVI-KTSIFSKASDVWSYGVVLWELLTGE 318
+++ + ++S + + APE+I + ++ + DVWS G VL ELL G+
Sbjct: 171 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
+ Q+ + Y+H + HRD+K N+LL D LK+ DFG A+++ +
Sbjct: 139 YMYQLFRSLAYIHS---FGICHRDIKPQNLLL-------DPDTAVLKLCDFGSAKQLVRG 188
Query: 277 -THMSAAGTYAWMAPEVI-KTSIFSKASDVWSYGVVLWELLTGE 318
++S + + APE+I + ++ + DVWS G VL ELL G+
Sbjct: 189 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2YDL|A Chain A, Crystal Structure Of Sh3c From Cin85
Length = 69
Score = 52.8 bits (125), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 7/61 (11%)
Query: 33 DLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANF 92
D + ++ Y+A DEL+++ GDIV +++KD DVGWW G++ G + G+FP NF
Sbjct: 3 DYCKVIFPYEAQNDDELTIKEGDIVTLINKDCI---DVGWWEGELNG----RRGVFPDNF 55
Query: 93 V 93
V
Sbjct: 56 V 56
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
+ Q+ + Y+H + HRD+K N+LL D LK+ DFG A+++ +
Sbjct: 139 YMYQLFRSLAYIHS---FGICHRDIKPQNLLL-------DPDTAVLKLCDFGSAKQLVRG 188
Query: 277 -THMSAAGTYAWMAPEVI-KTSIFSKASDVWSYGVVLWELLTGE 318
++S + + APE+I + ++ + DVWS G VL ELL G+
Sbjct: 189 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK- 275
+ Q+ + Y+H + HRD+K N+LL D LK+ DFG A+++ +
Sbjct: 127 YMYQLFRSLAYIHS---FGICHRDIKPQNLLL-------DPDTAVLKLCDFGSAKQLVRG 176
Query: 276 TTHMSAAGTYAWMAPEVI-KTSIFSKASDVWSYGVVLWELLTGE 318
++S + + APE+I + ++ + DVWS G VL ELL G+
Sbjct: 177 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
+ Q+ + Y+H + HRD+K N+LL D LK+ DFG A+++ +
Sbjct: 131 YMYQLFRSLAYIHS---FGICHRDIKPQNLLL-------DPDTAVLKLCDFGSAKQLVRG 180
Query: 277 -THMSAAGTYAWMAPEVI-KTSIFSKASDVWSYGVVLWELLTGE 318
++S + + APE+I + ++ + DVWS G VL ELL G+
Sbjct: 181 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK- 275
+ Q+ + Y+H + HRD+K N+LL D LK+ DFG A+++ +
Sbjct: 127 YMYQLFRSLAYIHS---FGICHRDIKPQNLLL-------DPDTAVLKLCDFGSAKQLVRG 176
Query: 276 TTHMSAAGTYAWMAPEVI-KTSIFSKASDVWSYGVVLWELLTGE 318
++S + + APE+I + ++ + DVWS G VL ELL G+
Sbjct: 177 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK- 275
+ Q+ + Y+H + HRD+K N+LL D LK+ DFG A+++ +
Sbjct: 128 YMYQLFRSLAYIHS---FGICHRDIKPQNLLL-------DPDTAVLKLCDFGSAKQLVRG 177
Query: 276 TTHMSAAGTYAWMAPEVI-KTSIFSKASDVWSYGVVLWELLTGE 318
++S + + APE+I + ++ + DVWS G VL ELL G+
Sbjct: 178 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
+ Q+ + Y+H + HRD+K N+LL D LK+ DFG A+++ +
Sbjct: 127 YMYQLFRSLAYIHS---FGICHRDIKPQNLLL-------DPDTAVLKLCDFGSAKQLVRG 176
Query: 277 -THMSAAGTYAWMAPEVI-KTSIFSKASDVWSYGVVLWELLTGE 318
++S + + APE+I + ++ + DVWS G VL ELL G+
Sbjct: 177 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,853,842
Number of Sequences: 62578
Number of extensions: 581103
Number of successful extensions: 5158
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 406
Number of HSP's that attempted gapping in prelim test: 1621
Number of HSP's gapped (non-prelim): 1394
length of query: 527
length of database: 14,973,337
effective HSP length: 103
effective length of query: 424
effective length of database: 8,527,803
effective search space: 3615788472
effective search space used: 3615788472
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)