RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy6905
(527 letters)
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 404 bits (1041), Expect = e-140
Identities = 172/271 (63%), Positives = 211/271 (77%), Gaps = 3/271 (1%)
Query: 111 LVEIDYNKLIFGEAIGEGGFGKVYKGIYEKQEVAIKVAHPNPDENI---LENVKQEGKLL 167
L+EID+ +L E IG GGFGKVY+ + EVA+K A +PDE+I +ENV+QE KL
Sbjct: 1 LLEIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLF 60
Query: 168 WLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNY 227
+ H NI++L GVCL+ P LCLVME+ARGGPLNRVL+G++I PD+LV+WA+QIA GMNY
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNY 120
Query: 228 LHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAW 287
LH +A + +IHRDLKSSN+L+ + +EN DL K LKITDFGLARE ++TT MSAAG YAW
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAW 180
Query: 288 MAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNKLTLPIPSTCP 347
MAPEVI+ S+FSK SDVWSYGV+LWELLTGE+P++ I+ AVAYGVA+NKL LPIPSTCP
Sbjct: 181 MAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCP 240
Query: 348 QLFKTLMEACWEADSHMRPSFKTILKALNNI 378
+ F LME CW D H RPSF IL L I
Sbjct: 241 EPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 362 bits (931), Expect = e-123
Identities = 98/298 (32%), Positives = 150/298 (50%), Gaps = 17/298 (5%)
Query: 100 NLVSSVINDVKLVEIDYNKLIFGEAIGEGGFGKVYKGIYEKQEVAIKVAH-PNPDENILE 158
NL D ++I + L E IG G FG V++ + +VA+K+ + +
Sbjct: 20 NLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVN 79
Query: 159 NVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL----AGRKIRPDVL 214
+E ++ H NIV +G Q P L +V EY G L R+L A ++
Sbjct: 80 EFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRR 139
Query: 215 VDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY 274
+ A +A+GMNYLH + P ++HR+LKS N+L+ + T+K+ DFGL+R
Sbjct: 140 LSMAYDVAKGMNYLHNRNP-PIVHRNLKSPNLLVDK--------KYTVKVCDFGLSRLKA 190
Query: 275 KT--THMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYG 332
T + SAAGT WMAPEV++ ++ SDV+S+GV+LWEL T + P+ ++N V
Sbjct: 191 STFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAA 250
Query: 333 VAVNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQTPHES 390
V L IP ++E CW + RPSF TI+ L ++ S + P+ S
Sbjct: 251 VGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS-AVPPPNRS 307
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 359 bits (923), Expect = e-122
Identities = 107/314 (34%), Positives = 155/314 (49%), Gaps = 23/314 (7%)
Query: 111 LVEIDYNKLIFGEAIGEGGFGKVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLF 170
L IDY ++ E +G G FG V K + ++VAIK E+ + E + L
Sbjct: 2 LHMIDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIE---SESERKAFIVELRQLSRV 58
Query: 171 DHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDV----LVDWAIQIAEGMN 226
+H NIV L G CL +CLVMEYA GG L VL G + P + W +Q ++G+
Sbjct: 59 NHPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 116
Query: 227 YLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYA 286
YLH P +LIHRDLK N+LL LKI DFG A ++ +T + G+ A
Sbjct: 117 YLHSMQPKALIHRDLKPPNLLL-------VAGGTVLKICDFGTACDI-QTHMTNNKGSAA 168
Query: 287 WMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNK-LTLPIPST 345
WMAPEV + S +S+ DV+S+G++LWE++T P+ I A AV+ P+
Sbjct: 169 WMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKN 228
Query: 346 CPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS-----EFIQTPHESFHIMQDGWRV 400
P+ ++LM CW D RPS + I+K + +++ E +Q P + + RV
Sbjct: 229 LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYPCQHSLPPGEDGRV 288
Query: 401 EIEQVLHELRVKEK 414
E E
Sbjct: 289 EPYVDFAEFYRLWS 302
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 336 bits (864), Expect = e-113
Identities = 84/292 (28%), Positives = 140/292 (47%), Gaps = 21/292 (7%)
Query: 101 LVSSVINDVKLVEIDYNKLIFGEAIGEGGFGKVYKGIYE--KQEVAIKVAHPNPDEN--- 155
+ S +L + N++ + + IG+GGFG V+KG K VAIK E
Sbjct: 3 MGGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETE 62
Query: 156 ---ILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK--IR 210
+ ++E ++ +H NIV L G+ P +VME+ G L L + I+
Sbjct: 63 MIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIK 120
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA 270
V + + IA G+ Y+ Q P ++HRDL+S N+ L EN + K+ DFGL+
Sbjct: 121 WSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPV---CAKVADFGLS 176
Query: 271 REVYKTTHMSAAGTYAWMAPEVIKT--SIFSKASDVWSYGVVLWELLTGEIPYKSINAYA 328
++ + G + WMAPE I +++ +D +S+ ++L+ +LTGE P+ +
Sbjct: 177 QQSVHSV-SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK 235
Query: 329 VAYGVAV--NKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNI 378
+ + + L IP CP + ++E CW D RP F I+K L+ +
Sbjct: 236 IKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 335 bits (861), Expect = e-113
Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 21/275 (7%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIYEKQEVAIKVAHP-NPDENILENVKQEGKLLWLFD 171
ID+ +L F + E G+++KG ++ ++ +KV + + +E L +F
Sbjct: 6 GIDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFS 65
Query: 172 HRNIVSLIGVCLQSP--KLCLVMEYARGGPLNRVL---AGRKIRPDVLVDWAIQIAEGMN 226
H N++ ++G C P L+ + G L VL + V +A+ +A GM
Sbjct: 66 HPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMA 125
Query: 227 YLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYA 286
+LH P+ + L S +V++ E T +I+ + M A
Sbjct: 126 FLHTLEPL-IPRHALNSRSVMIDE--------DMTARISMADVKFSFQSPGRM---YAPA 173
Query: 287 WMAPEVIK---TSIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNKLTLPIP 343
W+APE ++ +++D+WS+ V+LWEL+T E+P+ ++ + VA+ L IP
Sbjct: 174 WVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIP 233
Query: 344 STCPQLFKTLMEACWEADSHMRPSFKTILKALNNI 378
LM+ C D RP F I+ L +
Sbjct: 234 PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 326 bits (838), Expect = e-109
Identities = 79/285 (27%), Positives = 125/285 (43%), Gaps = 32/285 (11%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIYEKQEVAIKVAHP-NPDENILENVKQEGKLLWLFD 171
+I + +L GE IG+G FG+VY G + EVAI++ +E+ L+ K+E
Sbjct: 29 DIPFEQLEIGELIGKGRFGQVYHGRW-HGEVAIRLIDIERDNEDQLKAFKREVMAYRQTR 87
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPD--VLVDWAIQIAEGMNYLH 229
H N+V +G C+ P L ++ +G L V+ KI D A +I +GM YLH
Sbjct: 88 HENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH 147
Query: 230 CQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE-------VYKTTHMSAA 282
+ I +H+DLKS NV + ITDFGL +
Sbjct: 148 AK-GI--LHKDLKSKNVFYDN---------GKVVITDFGLFSISGVLQAGRREDKLRIQN 195
Query: 283 GTYAWMAPEVIKTSI---------FSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYGV 333
G +APE+I+ FSK SDV++ G + +EL E P+K+ A A+ + +
Sbjct: 196 GWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQM 255
Query: 334 AVNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNI 378
+ ++ CW + RP+F ++ L +
Sbjct: 256 GTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKL 300
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 301 bits (772), Expect = 3e-99
Identities = 93/283 (32%), Positives = 145/283 (51%), Gaps = 27/283 (9%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIYEKQEVAIKVAHP-NPDENILENVKQEGKLLWLFD 171
EI+ ++++ IG G FG VYKG + +VA+K+ +P + + E +L
Sbjct: 32 EIEASEVMLSTRIGSGSFGTVYKGKW-HGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTR 90
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGMNYLH 229
H NI+ +G + L +V ++ G L + L ++ + + L+D A Q A+GM+YLH
Sbjct: 91 HVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH 149
Query: 230 CQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT----THMSAAGTY 285
+ ++IHRD+KS+N+ L E T+KI DFGLA + G+
Sbjct: 150 AK---NIIHRDMKSNNIFLHE--------GLTVKIGDFGLATVKSRWSGSQQVEQPTGSV 198
Query: 286 AWMAPEVIKTSI---FSKASDVWSYGVVLWELLTGEIPYKSI-NAYAVAYGVAVNKLTLP 341
WMAPEVI+ FS SDV+SYG+VL+EL+TGE+PY I N + + V +
Sbjct: 199 LWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPD 258
Query: 342 IP---STCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
+ CP+ K L+ C + RP F IL ++ + HS
Sbjct: 259 LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 297 bits (763), Expect = 5e-98
Identities = 97/280 (34%), Positives = 143/280 (51%), Gaps = 27/280 (9%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIYEKQEVAIKVAHP-NPDENILENVKQEGKLLWLFD 171
EI ++ G+ IG G FG VYKG + +VA+K+ + P L+ K E +L
Sbjct: 20 EIPDGQITVGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 78
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVLVDWAIQIAEGMNYLH 229
H NI+ +G P+L +V ++ G L L + K L+D A Q A GM+YLH
Sbjct: 79 HVNILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH 137
Query: 230 CQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT----THMSAAGTY 285
+ S+IHRDLKS+N+ L E T+KI DFGLA E + +G+
Sbjct: 138 AK---SIIHRDLKSNNIFLHE--------DNTVKIGDFGLATEKSRWSGSHQFEQLSGSI 186
Query: 286 AWMAPEVIK---TSIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNKL---- 338
WMAPEVI+ ++ +S SDV+++G+VL+EL+TG++PY +IN +
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPD 246
Query: 339 TLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNI 378
+ S CP+ K LM C + RPSF IL + +
Sbjct: 247 LSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 284 bits (730), Expect = 7e-93
Identities = 78/296 (26%), Positives = 124/296 (41%), Gaps = 33/296 (11%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY--EKQEVAIKVAHPNPDENILENVKQEGKLLWLF 170
+ LI GE +G+G FG+ K + + + +K DE +E K++
Sbjct: 6 IFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELI-RFDEETQRTFLKEVKVMRCL 64
Query: 171 DHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVLVDWAIQIAEGMNYL 228
+H N++ IGV + +L + EY +GG L ++ + V +A IA GM YL
Sbjct: 65 EHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYL 124
Query: 229 HCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV--------------- 273
H ++IHRDL S N L+ E+ + + DFGLAR +
Sbjct: 125 HSM---NIIHRDLNSHNCLV-----RENK---NVVVADFGLARLMVDEKTQPEGLRSLKK 173
Query: 274 -YKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYG 332
+ + G WMAPE+I + + DV+S+G+VL E++ + +G
Sbjct: 174 PDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG 233
Query: 333 VAVNK-LTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQTP 387
+ V L P CP F + C + D RPSF + L + P
Sbjct: 234 LNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAGHLP 289
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 251 bits (643), Expect = 1e-79
Identities = 91/300 (30%), Positives = 137/300 (45%), Gaps = 39/300 (13%)
Query: 107 NDVKLVEIDYNKLIFGEAIGEGGFGKVYKGIY------EKQEVAIKVAHPNPDENILENV 160
N L + + + +G G FG VYKG++ K VAIK + +
Sbjct: 5 NQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 64
Query: 161 KQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVLVDWA 218
E ++ D+ ++ L+G+CL S + L+ + G L + I L++W
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC 123
Query: 219 IQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK--T 276
+QIA+GMNYL + L+HRDL + NVL+ P + +KITDFGLA+ +
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTP--------QHVKITDFGLAKLLGAEEK 172
Query: 277 THMSAAGTY--AWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGV 333
+ + G WMA E I I++ SDVWSYGV +WEL+T G PY I A +
Sbjct: 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI---- 228
Query: 334 AVNKLT----LPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQTPHE 389
+ L LP P C +M CW D+ RP F+ ++ S+ + P
Sbjct: 229 -SSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEF-----SKMARDPQR 282
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 249 bits (637), Expect = 2e-79
Identities = 87/285 (30%), Positives = 139/285 (48%), Gaps = 32/285 (11%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY-----EKQEVAIKVAHPNPDENILENVKQEGKLL 167
I ++ +GEG FG+VY+G+Y EK VA+K + + E E ++
Sbjct: 8 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 67
Query: 168 WLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVLVDWAIQIAEGM 225
DH +IV LIG+ + P ++ME G L L ++ LV +++QI + M
Sbjct: 68 KNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAM 126
Query: 226 NYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT- 284
YL I+ +HRD+ N+L++ P +K+ DFGL+R + + A+ T
Sbjct: 127 AYL---ESINCVHRDIAVRNILVASPE--------CVKLGDFGLSRYIEDEDYYKASVTR 175
Query: 285 --YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGVAVNKLT-- 339
WM+PE I F+ ASDVW + V +WE+L+ G+ P+ + V + L
Sbjct: 176 LPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV-----IGVLEKG 230
Query: 340 --LPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSE 382
LP P CP + TLM CW+ D RP F ++ +L+++ E
Sbjct: 231 DRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 249 bits (639), Expect = 2e-79
Identities = 72/301 (23%), Positives = 122/301 (40%), Gaps = 51/301 (16%)
Query: 119 LIFGEAIGEGGFGKVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSL 178
+ E +G+G +G+V++G ++ + VA+K+ + DE + E + H NI+
Sbjct: 10 ITLLECVGKGRYGEVWRGSWQGENVAVKI-FSSRDEKSWFR-ETELYNTVMLRHENILGF 67
Query: 179 IGVCL----QSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPI 234
I + S +L L+ Y G L L + + + IA G+ +LH +
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 235 SL-----IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM------SAAG 283
+ HRDLKS N+L+ ++ I D GLA ++T+ G
Sbjct: 128 TQGKPAIAHRDLKSKNILV-----KKNG---QCCIADLGLAVMHSQSTNQLDVGNNPRVG 179
Query: 284 TYAWMAPEVIKTSI------FSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYG----- 332
T +MAPEV+ +I K D+W++G+VLWE+ + + Y +
Sbjct: 180 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 239
Query: 333 ----------VAVNKLTLPIPST-----CPQLFKTLMEACWEADSHMRPSFKTILKALNN 377
V V++ IP+ LM+ CW + R + I K L
Sbjct: 240 DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299
Query: 378 I 378
I
Sbjct: 300 I 300
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 250 bits (641), Expect = 3e-79
Identities = 71/314 (22%), Positives = 125/314 (39%), Gaps = 51/314 (16%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDH 172
++ + IG+G +G+V+ G + ++VA+KV E + E L H
Sbjct: 33 RTIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFF--TTEEASWFRETEIYQTVLMRH 90
Query: 173 RNIVSLIGVCLQS----PKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYL 228
NI+ I ++ +L L+ +Y G L L + ++ A G+ +L
Sbjct: 91 ENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHL 150
Query: 229 HCQAPISL-----IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTH----- 278
H + + HRDLKS N+L+ ++ T I D GLA + T+
Sbjct: 151 HTEIFSTQGKPAIAHRDLKSKNILV-----KKNG---TCCIADLGLAVKFISDTNEVDIP 202
Query: 279 -MSAAGTYAWMAPEVIKTSI------FSKASDVWSYGVVLWELLTGEIPYKSINAYAVAY 331
+ GT +M PEV+ S+ +D++S+G++LWE+ + + Y + Y
Sbjct: 203 PNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY 262
Query: 332 ---------------GVAVNKLTLPIPST-----CPQLFKTLMEACWEADSHMRPSFKTI 371
V + KL P+ C + LM CW + R + +
Sbjct: 263 HDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRV 322
Query: 372 LKALNNIVHSEFIQ 385
K L + S+ I+
Sbjct: 323 KKTLAKMSESQDIK 336
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 245 bits (628), Expect = 4e-78
Identities = 92/294 (31%), Positives = 140/294 (47%), Gaps = 32/294 (10%)
Query: 107 NDVKLVEIDYNKLIFGEAIGEGGFGKVYKGIY-----EKQEVAIKVAHPNPDENILENVK 161
+ + EI ++ G IGEG FG V++GIY VAIK +++ E
Sbjct: 5 SSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL 64
Query: 162 QEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVLVDWAI 219
QE + FDH +IV LIGV ++P + ++ME G L L + L+ +A
Sbjct: 65 QEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 123
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
Q++ + YL +HRD+ + NVL+S +K+ DFGL+R + +T+
Sbjct: 124 QLSTALAYL---ESKRFVHRDIAARNVLVSSND--------CVKLGDFGLSRYMEDSTYY 172
Query: 280 SAAGT---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGVAV 335
A+ WMAPE I F+ ASDVW +GV +WE+L G P++ + V +
Sbjct: 173 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV-----I 227
Query: 336 NKLT----LPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQ 385
++ LP+P CP +LM CW D RP F + L+ I+ E Q
Sbjct: 228 GRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKAQ 281
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase,
quinoxaline, alternative splicing, ATP-binding,
chromosomal rearrangement; HET: IHX; 1.40A {Homo
sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A*
2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A*
2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A*
3ctj_A* ...
Length = 298
Score = 246 bits (630), Expect = 5e-78
Identities = 92/294 (31%), Positives = 140/294 (47%), Gaps = 35/294 (11%)
Query: 111 LVEIDYNKLIFGEAIGEGGFGKVYKGIY-----EKQEVAIKVAHPNPDENILENVKQEGK 165
++ + F E IG G FG VY G +K A+K + D + EG
Sbjct: 19 VIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI 78
Query: 166 LLWLFDHRNIVSLIGVCLQS-PKLCLVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIA 222
++ F H N++SL+G+CL+S +V+ Y + G L + P V L+ + +Q+A
Sbjct: 79 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA 138
Query: 223 EGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAA 282
+GM YL A +HRDL + N +L E T+K+ DFGLAR++Y + S
Sbjct: 139 KGMKYL---ASKKFVHRDLAARNCMLDEK--------FTVKVADFGLARDMYDKEYYSVH 187
Query: 283 GTYA------WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGVAV 335
WMA E ++T F+ SDVWS+GV+LWEL+T G PY +N + +
Sbjct: 188 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI-----T 242
Query: 336 NKLT----LPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQ 385
L L P CP +M CW + MRPSF ++ ++ I + +
Sbjct: 243 VYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 296
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 247 bits (633), Expect = 1e-77
Identities = 93/279 (33%), Positives = 134/279 (48%), Gaps = 21/279 (7%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY--EKQEVAIKVAHPNPDENILENVKQEGKLLWLF 170
+++ L+ GE IG G FG+V+ G + VA+K ++ QE ++L +
Sbjct: 110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY 169
Query: 171 DHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVLVDWAIQIAEGMNYL 228
H NIV LIGVC Q + +VME +GG L G ++R L+ A GM YL
Sbjct: 170 SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL 229
Query: 229 HCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYA-- 286
+ IHRDL + N L++E LKI+DFG++RE + ++ G
Sbjct: 230 ESK---CCIHRDLAARNCLVTEK--------NVLKISDFGMSREEADGVYAASGGLRQVP 278
Query: 287 --WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGVAVNKLTLPIP 343
W APE + +S SDVWS+G++LWE + G PY +++ V LP P
Sbjct: 279 VKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV-EKGGRLPCP 337
Query: 344 STCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSE 382
CP LME CW + RPSF TI + L +I
Sbjct: 338 ELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase
domain, hormone-growth factor complex; 1.50A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A*
1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A*
3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A*
1gag_A* 1irk_A 3bu3_A* ...
Length = 322
Score = 244 bits (626), Expect = 3e-77
Identities = 88/303 (29%), Positives = 141/303 (46%), Gaps = 47/303 (15%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY-------EKQEVAIKVAHPNPDENILENVKQEGK 165
E+ K+ +G+G FG VY+G+ + VAIK + E
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 166 LLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDV------------ 213
++ F+ ++V L+GV Q ++ME G L L R +RP +
Sbjct: 81 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPAMANNPVLAPPSLS 138
Query: 214 -LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE 272
++ A +IA+GM YL+ +HRDL + N +++E T+KI DFG+ R+
Sbjct: 139 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED--------FTVKIGDFGMTRD 187
Query: 273 VYKTTHMSAAGTYA----WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAY 327
+Y+T + G WM+PE +K +F+ SDVWS+GVVLWE+ T E PY+ ++
Sbjct: 188 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 247
Query: 328 AVAYGVAVNKLT----LPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEF 383
V + + L P CP + LM CW+ + MRPSF I+ ++ + F
Sbjct: 248 QV-----LRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 302
Query: 384 IQT 386
+
Sbjct: 303 REV 305
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 244 bits (624), Expect = 3e-77
Identities = 76/308 (24%), Positives = 126/308 (40%), Gaps = 51/308 (16%)
Query: 119 LIFGEAIGEGGFGKVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSL 178
++ E+IG+G FG+V++G + +EVA+K+ + + + E + H NI+
Sbjct: 5 IVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWF--REAEIYQTVMLRHENILGF 62
Query: 179 IGVCLQS----PKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPI 234
I + +L LV +Y G L L + + ++ A+ A G+ +LH +
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVG 122
Query: 235 SL-----IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM------SAAG 283
+ HRDLKS N+L+ ++ T I D GLA T G
Sbjct: 123 TQGKPAIAHRDLKSKNILV-----KKNG---TCCIADLGLAVRHDSATDTIDIAPNHRVG 174
Query: 284 TYAWMAPEVIKTSI------FSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYG----- 332
T +MAPEV+ SI K +D+++ G+V WE+ Y + Y
Sbjct: 175 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 234
Query: 333 ----------VAVNKLTLPIPST-----CPQLFKTLMEACWEADSHMRPSFKTILKALNN 377
V KL IP+ ++ +M CW A+ R + I K L+
Sbjct: 235 DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294
Query: 378 IVHSEFIQ 385
+ E I+
Sbjct: 295 LSQQEGIK 302
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 243 bits (622), Expect = 3e-77
Identities = 84/283 (29%), Positives = 130/283 (45%), Gaps = 35/283 (12%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDH 172
++ +L + IG+G FG V G Y +VA+K + + E ++ H
Sbjct: 17 ALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATA---QAFLAEASVMTQLRH 73
Query: 173 RNIVSLIGVCLQS-PKLCLVMEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYL 228
N+V L+GV ++ L +V EY G L R + D L+ +++ + E M YL
Sbjct: 74 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 133
Query: 229 HCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---Y 285
+ +HRDL + NVL+SE K++DFGL +E T
Sbjct: 134 EGN---NFVHRDLAARNVLVSED--------NVAKVSDFGLTKEASSTQD----TGKLPV 178
Query: 286 AWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGVAVNKLT----L 340
W APE ++ FS SDVWS+G++LWE+ + G +PY I V V ++ +
Sbjct: 179 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV-----VPRVEKGYKM 233
Query: 341 PIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEF 383
P CP +M+ CW D+ MRPSF + + L +I E
Sbjct: 234 DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHEL 276
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS
autophosphorylation conformation, recept tyrosine
kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo
sapiens}
Length = 298
Score = 242 bits (620), Expect = 1e-76
Identities = 98/316 (31%), Positives = 156/316 (49%), Gaps = 43/316 (13%)
Query: 97 EDINLVSSVINDVKLVEI--DYNKLIFGEAIGEGGFGKVYKGIY-----EKQEVAIKVAH 149
D++ S+++ +VK V I + IG+G FG VY G Y + + AIK
Sbjct: 1 RDLD--SALLAEVKDVLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLS 58
Query: 150 PNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQS-PKLCLVMEYARGGPLNRVLAGRK 208
+ +E +EG L+ +H N+++LIG+ L +++ Y G L + + +
Sbjct: 59 RITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQ 118
Query: 209 IRPDV--LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITD 266
P V L+ + +Q+A GM YL A +HRDL + N +L E T+K+ D
Sbjct: 119 RNPTVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDES--------FTVKVAD 167
Query: 267 FGLAREVYKTTHMSAAGTYA------WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEI 319
FGLAR++ + S W A E ++T F+ SDVWS+GV+LWELLT G
Sbjct: 168 FGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
Query: 320 PYKSINAYAVAYGVAVNKLT----LPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
PY+ I+ + + + L LP P CP +M+ CWEAD +RP+F+ ++ +
Sbjct: 228 PYRHIDPFDL-----THFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEV 282
Query: 376 NNIVHS----EFIQTP 387
IV + ++Q P
Sbjct: 283 EQIVSALLGDHYVQLP 298
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation,
cancer, PAN inhibitor, ATP-binding nucleotide-binding,
phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo
sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A*
Length = 318
Score = 242 bits (620), Expect = 2e-76
Identities = 96/302 (31%), Positives = 126/302 (41%), Gaps = 38/302 (12%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY------EKQEVAIKVAHPNPDENILENVKQEGKL 166
L +GEG FGKV Y + VA+K + KQE +
Sbjct: 27 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDI 86
Query: 167 LWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEG 224
L H +I+ G C + L LVMEY G L L I L+ +A QI EG
Sbjct: 87 LRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEG 146
Query: 225 MNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT 284
M YLH Q IHRDL + NVLL + +KI DFGLA+ V +
Sbjct: 147 MAYLHAQ---HYIHRDLAARNVLLDND--------RLVKIGDFGLAKAVPEGHEYYRVRE 195
Query: 285 YA-----WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAY-----GV 333
W APE +K F ASDVWS+GV L+ELLT + + +
Sbjct: 196 DGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQM 255
Query: 334 AVNKLT--------LPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQ 385
V +LT LP P CP LM+ CWE ++ RP+F+ ++ L + Q
Sbjct: 256 TVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQ 315
Query: 386 TP 387
P
Sbjct: 316 AP 317
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 243 bits (622), Expect = 5e-76
Identities = 91/292 (31%), Positives = 138/292 (47%), Gaps = 35/292 (11%)
Query: 111 LVEIDYNKLIFGEAIGEGGFGKVYKGIY-----EKQEVAIKVAHPNPDENILENVKQEGK 165
++ + F E IG G FG VY G +K A+K + D + EG
Sbjct: 83 VIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI 142
Query: 166 LLWLFDHRNIVSLIGVCLQS-PKLCLVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIA 222
++ F H N++SL+G+CL+S +V+ Y + G L + P V L+ + +Q+A
Sbjct: 143 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA 202
Query: 223 EGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAA 282
+GM +L A +HRDL + N +L E T+K+ DFGLAR++Y S
Sbjct: 203 KGMKFL---ASKKFVHRDLAARNCMLDEK--------FTVKVADFGLARDMYDKEFDSVH 251
Query: 283 GTYA------WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGVAV 335
WMA E ++T F+ SDVWS+GV+LWEL+T G PY +N + +
Sbjct: 252 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI-----T 306
Query: 336 NKLT----LPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEF 383
L L P CP +M CW + MRPSF ++ ++ I +
Sbjct: 307 VYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor,
receptor tyrosine kinase, spirocyc kinase domain,
phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus
musculus}
Length = 323
Score = 241 bits (618), Expect = 5e-76
Identities = 88/342 (25%), Positives = 148/342 (43%), Gaps = 54/342 (15%)
Query: 96 IEDINLVSSVINDVKLVEIDYNKLIFGEAIGEGGFGKVYKGIY-----EKQEVAIKVAHP 150
++ + + + ++ V I + G +G+G FG V + +VA+K+
Sbjct: 2 LDSLGISDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKA 61
Query: 151 N-PDENILENVKQEGKLLWLFDHRNIVSLIGVCLQS------PKLCLVMEYARGGPLNRV 203
+ + +E +E + FDH ++ L+GV L+S P +++ + + G L+
Sbjct: 62 DIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAF 121
Query: 204 LAGRKIRPDV---------LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIEN 254
L R LV + + IA GM YL + + IHRDL + N +L+E
Sbjct: 122 L--LASRIGENPFNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAED--- 173
Query: 255 EDLQFKTLKITDFGLAREVYKTTHMSAAGTYA----WMAPEVIKTSIFSKASDVWSYGVV 310
T+ + DFGL+R++Y + W+A E + ++++ SDVW++GV
Sbjct: 174 -----MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVT 228
Query: 311 LWELLT-GEIPYKSINAYAVAYGVAVNKLT----LPIPSTCPQLFKTLMEACWEADSHMR 365
+WE++T G+ PY I + N L L P C + LM CW AD R
Sbjct: 229 MWEIMTRGQTPYAGIENAEI-----YNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQR 283
Query: 366 PSFKTILKALNNIVHSEFIQTPHESFHIMQDGWRVEIEQVLH 407
PSF + L NI+ QD + IE+ H
Sbjct: 284 PSFTCLRMELENILGHL------SVLSTSQDPLYINIERAHH 319
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 240 bits (615), Expect = 5e-76
Identities = 75/302 (24%), Positives = 138/302 (45%), Gaps = 38/302 (12%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY---------EKQEVAIKV---AHPNPDENILENV 160
+I LIF E++G+G F K++KG+ + EV +KV AH N E+
Sbjct: 4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFF--- 60
Query: 161 KQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVLVDWA 218
+ ++ H+++V GVC+ + LV E+ + G L+ L I ++ A
Sbjct: 61 -EAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVA 119
Query: 219 IQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTH 278
Q+A M++L +LIH ++ + N+LL + + +K++D G++ V
Sbjct: 120 KQLAAAMHFL---EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI 176
Query: 279 MSAAGTYAWMAPEVIKTS-IFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGVAVN 336
+ W+ PE I+ + A+D WS+G LWE+ + G+ P ++++ +
Sbjct: 177 LQER--IPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRK-----LQ 229
Query: 337 KLT----LPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQ--TPHES 390
LP P L L+ C + + RPSF+ I++ LN++ + + + H
Sbjct: 230 FYEDRHQLPAPKAAE-LAN-LINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPRGSHHHH 287
Query: 391 FH 392
H
Sbjct: 288 HH 289
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 245 bits (627), Expect = 8e-76
Identities = 82/282 (29%), Positives = 129/282 (45%), Gaps = 35/282 (12%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDH 172
++ +L + IG+G FG V G Y +VA+K + + E ++ H
Sbjct: 189 ALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATA---QAFLAEASVMTQLRH 245
Query: 173 RNIVSLIGVCLQS-PKLCLVMEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYL 228
N+V L+GV ++ L +V EY G L R + D L+ +++ + E M YL
Sbjct: 246 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 305
Query: 229 HCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---Y 285
+ +HRDL + NVL+SE K++DFGL +E T
Sbjct: 306 EGN---NFVHRDLAARNVLVSEDN--------VAKVSDFGLTKEASSTQD----TGKLPV 350
Query: 286 AWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGVAVNKLT----L 340
W APE ++ FS SDVWS+G++LWE+ + G +PY I V V ++ +
Sbjct: 351 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV-----VPRVEKGYKM 405
Query: 341 PIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSE 382
P CP +M+ CW D+ RP+F + + L +I E
Sbjct: 406 DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447
Score = 50.4 bits (121), Expect = 9e-07
Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Query: 33 DLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANF 92
A Y++ +L +GD++ +++ + D W+ K + GI PAN+
Sbjct: 12 TECIAKYNFHGTAEQDLPFCKGDVLTIVAV----TKDPNWYKAK---NKVGREGIIPANY 64
Query: 93 VSSIEDIN 100
V E +
Sbjct: 65 VQKREGVK 72
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive
kinase, HER3, ATP-binding, cell membrane, membrane,
nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB:
3lmg_A*
Length = 325
Score = 241 bits (616), Expect = 9e-76
Identities = 85/302 (28%), Positives = 131/302 (43%), Gaps = 39/302 (12%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY------EKQEVAIKVAHPNPDENILENVKQEGKL 166
+L + +G G FG V+KG++ K V IKV + V
Sbjct: 9 IFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLA 68
Query: 167 LWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK--IRPDVLVDWAIQIAEG 224
+ DH +IV L+G+C S L LV +Y G L + + + P +L++W +QIA+G
Sbjct: 69 IGSLDHAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKG 127
Query: 225 MNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT-THMSAAG 283
M YL ++HR+L + NVLL P +++ DFG+A + + +
Sbjct: 128 MYYLEEH---GMVHRNLAARNVLLKSP--------SQVQVADFGVADLLPPDDKQLLYSE 176
Query: 284 T---YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGVAVNKLT 339
WMA E I ++ SDVWSYGV +WEL+T G PY + V + L
Sbjct: 177 AKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV-----PDLLE 231
Query: 340 ----LPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQ 395
L P C +M CW D ++RP+FK + + + P I +
Sbjct: 232 KGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEF-----TRMARDPPRYLVIKR 286
Query: 396 DG 397
+
Sbjct: 287 ES 288
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 241 bits (616), Expect = 9e-76
Identities = 88/287 (30%), Positives = 124/287 (43%), Gaps = 33/287 (11%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY-----EKQEVAIKVAHPNPDENILENVKQEGKLL 167
EI+ +++ + IG G G+V G VAIK E + E ++
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIM 104
Query: 168 WLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVLVDWAIQIAEGM 225
FDH NI+ L GV + +V EY G L+ L + LV + GM
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGM 164
Query: 226 NYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK---TTHMSAA 282
YL +HRDL + NVL+ K++DFGL+R + + +
Sbjct: 165 RYLSDL---GYVHRDLAARNVLVDSN--------LVCKVSDFGLSRVLEDDPDAAYTTTG 213
Query: 283 GTYA--WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGVAVNKLT 339
G W APE I FS ASDVWS+GVV+WE+L GE PY ++ V ++ +
Sbjct: 214 GKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV-----ISSVE 268
Query: 340 ----LPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSE 382
LP P CP LM CW D RP F I+ L+ ++ S
Sbjct: 269 EGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 239 bits (612), Expect = 1e-75
Identities = 89/291 (30%), Positives = 129/291 (44%), Gaps = 27/291 (9%)
Query: 107 NDVKLVEIDYNKLIFGEAIGEGGFGKVYKGIY-----EKQEVAIKVAHPNP--DENILEN 159
I L E +G+G FG V +G + + VA+K P+ +++
Sbjct: 8 LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD 67
Query: 160 VKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVLVDW 217
+E + DHRN++ L GV L P + +V E A G L L L +
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRY 126
Query: 218 AIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY--- 274
A+Q+AEGM YL + IHRDL + N+LL+ +KI DFGL R +
Sbjct: 127 AVQVAEGMGYLESK---RFIHRDLAARNLLLATR--------DLVKIGDFGLMRALPQND 175
Query: 275 KTTHMSAAGT--YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAY 331
M +AW APE +KT FS ASD W +GV LWE+ T G+ P+ +N + +
Sbjct: 176 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH 235
Query: 332 GVAVNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSE 382
+ LP P CPQ +M CW RP+F + L ++
Sbjct: 236 KIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 240 bits (614), Expect = 2e-75
Identities = 88/292 (30%), Positives = 128/292 (43%), Gaps = 33/292 (11%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY-------EKQEVAIKVAHPNPDENILENVKQEGK 165
E+ + +G G FG+VY+G +VA+K E + E
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 166 LLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDV----------LV 215
++ F+H+NIV IGV LQS ++ME GG L L R+ RP L+
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL--RETRPRPSQPSSLAMLDLL 143
Query: 216 DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK 275
A IA G YL IHRD+ + N LL+ P + KI DFG+AR++Y+
Sbjct: 144 HVARDIACGCQYL---EENHFIHRDIAARNCLLTCPGPG-----RVAKIGDFGMARDIYR 195
Query: 276 TTHMSAAGTYA----WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVA 330
++ G WM PE IF+ +D WS+GV+LWE+ + G +PY S + V
Sbjct: 196 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 255
Query: 331 YGVAVNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSE 382
V + P CP +M CW+ RP+F IL+ +
Sbjct: 256 EFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP
binding, phosphorylation, intracellular,
transferase-transferase inhibitor complex; HET: IAQ;
1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A*
3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A*
3mj1_A* 3mj2_A*
Length = 267
Score = 237 bits (608), Expect = 3e-75
Identities = 87/282 (30%), Positives = 134/282 (47%), Gaps = 29/282 (10%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIYEKQ-EVAIKVAHPNPDENILENVKQEGKLLWLFD 171
ID ++L F + IG G FG V+ G + + +VAIK E+ +E +++
Sbjct: 4 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--EDFIEEAEVMMKLS 61
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVLVDWAIQIAEGMNYLH 229
H +V L GVCL+ +CLV E+ G L+ L + L+ + + EGM YL
Sbjct: 62 HPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL- 120
Query: 230 CQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YA 286
+IHRDL + N L+ E +K++DFG+ R V + S+ GT
Sbjct: 121 --EEACVIHRDLAARNCLVGENQ--------VIKVSDFGMTRFVLDDQYTSSTGTKFPVK 170
Query: 287 WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGVAVNKLT----LP 341
W +PEV S +S SDVWS+GV++WE+ + G+IPY++ + V V ++ L
Sbjct: 171 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV-----VEDISTGFRLY 225
Query: 342 IPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEF 383
P +M CW RP+F +L+ L I S
Sbjct: 226 KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESGL 267
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 239 bits (613), Expect = 3e-75
Identities = 89/293 (30%), Positives = 135/293 (46%), Gaps = 34/293 (11%)
Query: 107 NDVKLVEIDYNKLIFGEAIGEGGFGKVYKGIY------EKQEVAIKVAHPNPDENILENV 160
N L + + + +G G FG VYKG++ K VAIK + +
Sbjct: 5 NQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 64
Query: 161 KQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVLVDWA 218
E ++ D+ ++ L+G+CL S + L+ + G L + I L++W
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC 123
Query: 219 IQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK--T 276
+QIA+GMNYL + L+HRDL + NVL+ P + +KITDFGLA+ +
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTP--------QHVKITDFGLAKLLGAEEK 172
Query: 277 THMSAAGTY--AWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGV 333
+ + G WMA E I I++ SDVWSYGV +WEL+T G PY I A +
Sbjct: 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI---- 228
Query: 334 AVNKLT----LPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSE 382
+ L LP P C +M CW D+ RP F+ ++ + +
Sbjct: 229 -SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 280
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 240 bits (613), Expect = 4e-75
Identities = 77/314 (24%), Positives = 125/314 (39%), Gaps = 51/314 (16%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDH 172
++ E+IG+G FG+V++G + +EVA+K+ +E + E + H
Sbjct: 38 RTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSS-REERSWFR-EAEIYQTVMLRH 95
Query: 173 RNIVSLIGVCLQ----SPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYL 228
NI+ I + +L LV +Y G L L + + ++ A+ A G+ +L
Sbjct: 96 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHL 155
Query: 229 HCQAPISL-----IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM---- 279
H + + HRDLKS N+L+ + T I D GLA T
Sbjct: 156 HMEIVGTQGKPAIAHRDLKSKNILVKKN--------GTCCIADLGLAVRHDSATDTIDIA 207
Query: 280 --SAAGTYAWMAPEVIKTSI------FSKASDVWSYGVVLWELLTGEIPYKSINAYAVAY 331
GT +MAPEV+ SI K +D+++ G+V WE+ Y + Y
Sbjct: 208 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 267
Query: 332 G---------------VAVNKLTLPIPST-----CPQLFKTLMEACWEADSHMRPSFKTI 371
V KL IP+ ++ +M CW A+ R + I
Sbjct: 268 YDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI 327
Query: 372 LKALNNIVHSEFIQ 385
K L+ + E I+
Sbjct: 328 KKTLSQLSQQEGIK 341
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase
inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB:
3sxr_A*
Length = 268
Score = 237 bits (607), Expect = 5e-75
Identities = 75/281 (26%), Positives = 128/281 (45%), Gaps = 29/281 (10%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIYEKQ-EVAIKVAHPNPDENILENVKQEGKLLWLFD 171
E+ ++ + +G G FG V G ++ Q +VA+K+ + QE + +
Sbjct: 4 ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE--DEFFQEAQTMMKLS 61
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVLVDWAIQIAEGMNYLH 229
H +V GVC + + +V EY G L L G+ + P L++ + EGM +L
Sbjct: 62 HPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE 121
Query: 230 CQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YA 286
IHRDL + N L+ +K++DFG+ R V ++S+ GT
Sbjct: 122 SH---QFIHRDLAARNCLVDRD--------LCVKVSDFGMTRYVLDDQYVSSVGTKFPVK 170
Query: 287 WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGVAVNKLT----LP 341
W APEV +S SDVW++G+++WE+ + G++PY V V K++ L
Sbjct: 171 WSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV-----VLKVSQGHRLY 225
Query: 342 IPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSE 382
P +M +CW RP+F+ +L ++ + +
Sbjct: 226 RPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 240 bits (614), Expect = 8e-75
Identities = 87/292 (29%), Positives = 127/292 (43%), Gaps = 33/292 (11%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY-------EKQEVAIKVAHPNPDENILENVKQEGK 165
E+ + +G G FG+VY+G +VA+K E + E
Sbjct: 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 126
Query: 166 LLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDV----------LV 215
++ F+H+NIV IGV LQS +++E GG L L R+ RP L+
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL--RETRPRPSQPSSLAMLDLL 184
Query: 216 DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK 275
A IA G YL IHRD+ + N LL+ P + KI DFG+AR++Y+
Sbjct: 185 HVARDIACGCQYL---EENHFIHRDIAARNCLLTCPGPG-----RVAKIGDFGMARDIYR 236
Query: 276 TTHMSAAGTYA----WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVA 330
+ G WM PE IF+ +D WS+GV+LWE+ + G +PY S + V
Sbjct: 237 AGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 296
Query: 331 YGVAVNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSE 382
V + P CP +M CW+ RP+F IL+ +
Sbjct: 297 EFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 236 bits (605), Expect = 2e-74
Identities = 88/294 (29%), Positives = 133/294 (45%), Gaps = 26/294 (8%)
Query: 112 VEIDYNKLIFGE-AIGEGGFGKVYKGIY----EKQEVAIKVAHPN-PDENILENVKQEGK 165
V +D L + +G G FG V KG Y + VA+K+ D + + + E
Sbjct: 11 VYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN 70
Query: 166 LLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL-AGRKIRPDVLVDWAIQIAEG 224
++ D+ IV +IG+C LVME A GPLN+ L R ++ +++ Q++ G
Sbjct: 71 VMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG 129
Query: 225 MNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK---TTHMSA 281
M YL + +HRDL + NVLL KI+DFGL++ +
Sbjct: 130 MKYLEES---NFVHRDLAARNVLLVTQ--------HYAKISDFGLSKALRADENYYKAQT 178
Query: 282 AGTY--AWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGVAVNKL 338
G + W APE I FS SDVWS+GV++WE + G+ PY+ + V + +
Sbjct: 179 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 238
Query: 339 TLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFH 392
+ P+ CP+ LM CW D RP F + L N + + H H
Sbjct: 239 -MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEGHHHHHH 291
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease
mutation, glycoprotein, nucleot binding,
phosphorylation, receptor; HET: ADP; 1.90A {Homo
sapiens} PDB: 3bpr_A* 2p0c_A*
Length = 313
Score = 237 bits (607), Expect = 2e-74
Identities = 81/311 (26%), Positives = 139/311 (44%), Gaps = 47/311 (15%)
Query: 101 LVSSVINDVKLVEIDYNKLIFGEAIGEGGFGKVYKGIY-----EKQEVAIKVAHP-NPDE 154
+ N ++ V ID N LI G+ +GEG FG V +G +VA+K N +
Sbjct: 18 GSEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQ 77
Query: 155 NILENVKQEGKLLWLFDHRNIVSLIGVCLQS-----PKLCLVMEYARGGPLNRVLAGRKI 209
+E E + F H N++ L+GVC++ PK +++ + + G L+ L
Sbjct: 78 REIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYL--LYS 135
Query: 210 RPDV---------LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
R + L+ + + IA GM YL + + +HRDL + N +L +
Sbjct: 136 RLETGPKHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDD--------M 184
Query: 261 TLKITDFGLAREVYKTTHMSAAGTYA----WMAPEVIKTSIFSKASDVWSYGVVLWELLT 316
T+ + DFGL++++Y + W+A E + +++ SDVW++GV +WE+ T
Sbjct: 185 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
Query: 317 -GEIPYKSINAYAVAYGVAVNKLT----LPIPSTCPQLFKTLMEACWEADSHMRPSFKTI 371
G PY + + + + L L P C +M +CW D RP+F +
Sbjct: 245 RGMTPYPGVQNHEM-----YDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVL 299
Query: 372 LKALNNIVHSE 382
L ++ S
Sbjct: 300 RLQLEKLLESL 310
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain,
transferase-transferase inhibit complex; HET: PTR 0NT;
1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A*
3eyh_A*
Length = 302
Score = 236 bits (605), Expect = 2e-74
Identities = 85/296 (28%), Positives = 126/296 (42%), Gaps = 40/296 (13%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY------EKQEVAIKVAHPNPDENILENVKQEGKL 166
+ L +GEG FGKV Y ++VA+K P N + ++K+E ++
Sbjct: 17 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEI 76
Query: 167 LWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGPLNRVLAGRK--IRPDVLVDWAIQIA 222
L H NIV G+C + + L+ME+ G L L K I + +A+QI
Sbjct: 77 LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC 136
Query: 223 EGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAA 282
+GM+YL + +HRDL + NVL+ +KI DFGL + +
Sbjct: 137 KGMDYLGSR---QYVHRDLAARNVLVESE--------HQVKIGDFGLTKAIETDKEYYTV 185
Query: 283 GTYA-----WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAY----- 331
W APE + S F ASDVWS+GV L ELLT + + +
Sbjct: 186 KDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHG 245
Query: 332 GVAVNKLT--------LPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIV 379
+ V +L LP P CP LM CWE R SF+ +++ ++
Sbjct: 246 QMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 237 bits (607), Expect = 3e-74
Identities = 87/288 (30%), Positives = 137/288 (47%), Gaps = 34/288 (11%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY------EKQEVAIKVAHPNPDENILENVKQEGKL 166
EI + + + IG G FG+VYKG+ ++ VAIK E + E +
Sbjct: 40 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI 99
Query: 167 LWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVLVDWAIQIAEG 224
+ F H NI+ L GV + + ++ EY G L++ L + LV IA G
Sbjct: 100 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAG 159
Query: 225 MNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV---YKTTHMSA 281
M YL + +HRDL + N+L++ K++DFGL+R + + T+ ++
Sbjct: 160 MKYLANM---NYVHRDLAARNILVNSN--------LVCKVSDFGLSRVLEDDPEATYTTS 208
Query: 282 AGTYA--WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGVAVNKL 338
G W APE I F+ ASDVWS+G+V+WE++T GE PY ++ + V + +
Sbjct: 209 GGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV-----MKAI 263
Query: 339 T----LPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSE 382
LP P CP LM CW+ + RP F I+ L+ ++ +
Sbjct: 264 NDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311
>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase,
neurotrophic tyrosine kinase, receptor-related NTRKR2;
2.90A {Homo sapiens}
Length = 289
Score = 235 bits (603), Expect = 3e-74
Identities = 98/302 (32%), Positives = 129/302 (42%), Gaps = 45/302 (14%)
Query: 110 KLVEIDYNKLIFGEAIGEGGFGKVYKGIY-------EKQEVAIKVAHPNPDENILENVKQ 162
KL EI + + F E +GE FGKVYKG + Q VAIK + + E +
Sbjct: 2 KLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 61
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDV--------- 213
E L H N+V L+GV + L ++ Y G L+ L P
Sbjct: 62 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL--VMRSPHSDVGSTDDDR 119
Query: 214 ----------LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLK 263
V QIA GM YL + ++H+DL + NVL+ + L +K
Sbjct: 120 TVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLV-----YDKL---NVK 168
Query: 264 ITDFGLAREVYKTTHMSAAGTYA----WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GE 318
I+D GL REVY + G WMAPE I FS SD+WSYGVVLWE+ + G
Sbjct: 169 ISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL 228
Query: 319 IPYKSINAYAVAYGVAVNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNI 378
PY + V + ++ LP P CP LM CW RP FK I L
Sbjct: 229 QPYCGYSNQDVVEMIRNRQV-LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 287
Query: 379 VH 380
+
Sbjct: 288 GN 289
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 246 bits (630), Expect = 3e-74
Identities = 95/288 (32%), Positives = 142/288 (49%), Gaps = 32/288 (11%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY-----EKQEVAIKVAHPNPDENILENVKQEGKLL 167
EI ++ G IGEG FG V++GIY VAIK +++ E QE +
Sbjct: 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 445
Query: 168 WLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDV--LVDWAIQIAEGM 225
FDH +IV LIGV ++P + ++ME G L L RK D+ L+ +A Q++ +
Sbjct: 446 RQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTAL 504
Query: 226 NYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT- 284
YL +HRD+ + NVL+S +K+ DFGL+R + +T+ A+
Sbjct: 505 AYL---ESKRFVHRDIAARNVLVSSN--------DCVKLGDFGLSRYMEDSTYYKASKGK 553
Query: 285 --YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGVAVNKLT-- 339
WMAPE I F+ ASDVW +GV +WE+L G P++ + V + ++
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV-----IGRIENG 608
Query: 340 --LPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQ 385
LP+P CP +LM CW D RP F + L+ I+ E +Q
Sbjct: 609 ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKLQ 656
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 235 bits (601), Expect = 4e-74
Identities = 85/282 (30%), Positives = 133/282 (47%), Gaps = 31/282 (10%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIYEKQ-EVAIKVAHPNPDENILENVKQEGKLLWLFD 171
E+ L E +G G FG+V+ G Y +VA+K + E L+
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL--KQGSMSPDAFLAEANLMKQLQ 66
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYL 228
H+ +V L V Q P + ++ EY G L + +G K+ + L+D A QIAEGM ++
Sbjct: 67 HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 229 HCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---Y 285
+ + IHRDL+++N+L+S+ + + KI DFGLAR + + + G
Sbjct: 126 EER---NYIHRDLRAANILVSDTL--------SCKIADFGLARLIEDNEYTAREGAKFPI 174
Query: 286 AWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGVAVNKLT----L 340
W APE I F+ SDVWS+G++L E++T G IPY + V + L +
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV-----IQNLERGYRM 229
Query: 341 PIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSE 382
P CP+ LM CW+ RP+F + L + +
Sbjct: 230 VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 235 bits (601), Expect = 6e-74
Identities = 91/291 (31%), Positives = 137/291 (47%), Gaps = 34/291 (11%)
Query: 113 EIDYNKLIFGEA-IGEGGFGKVYKGIY----EKQEVAIKVAHPNPDENILENVKQEGKLL 167
+ + L+ + +G G FG V +G+Y ++ +VAIKV ++ E + +E +++
Sbjct: 5 FLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIM 64
Query: 168 WLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVLVDWAIQIAEGM 225
D+ IV LIGVC L LVME A GGPL++ L +I + + Q++ GM
Sbjct: 65 HQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGM 123
Query: 226 NYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK---TTHMSAA 282
YL + +HRDL + NVLL KI+DFGL++ + +A
Sbjct: 124 KYL---EEKNFVHRDLAARNVLLVNR--------HYAKISDFGLSKALGADDSYYTARSA 172
Query: 283 GTY--AWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGVAVNKLT 339
G + W APE I FS SDVWSYGV +WE L+ G+ PYK + V + +
Sbjct: 173 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV-----MAFIE 227
Query: 340 ----LPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT 386
+ P CP LM CW RP F T+ + + +S +
Sbjct: 228 QGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV 278
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase,
4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,
2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43;
1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A*
3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A*
1k2p_A
Length = 283
Score = 234 bits (600), Expect = 7e-74
Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 29/281 (10%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIYEKQ-EVAIKVAHPNPDENILENVKQEGKLLWLFD 171
EID L F + +G G FG V G + Q +VAIK+ + +E K++
Sbjct: 20 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE--DEFIEEAKVMMNLS 77
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVLVDWAIQIAEGMNYLH 229
H +V L GVC + + ++ EY G L L + + L++ + E M YL
Sbjct: 78 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL- 136
Query: 230 CQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---YA 286
+HRDL + N L+++ +K++DFGL+R V + S+ G+
Sbjct: 137 --ESKQFLHRDLAARNCLVNDQG--------VVKVSDFGLSRYVLDDEYTSSVGSKFPVR 186
Query: 287 WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGVAVNKLT----LP 341
W PEV+ S FS SD+W++GV++WE+ + G++PY+ + L
Sbjct: 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET-----AEHIAQGLRLY 241
Query: 342 IPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSE 382
P + T+M +CW + RP+FK +L + +++ E
Sbjct: 242 RPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene
homolog; kinase, structure, inhibitor, STI-571, gleevec,
transferase activator; HET: STI; 1.60A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Length = 313
Score = 234 bits (600), Expect = 2e-73
Identities = 91/305 (29%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY-------EKQEVAIKVAHPNPDENILENVKQEGK 165
E N+L FG+ +G G FGKV + VA+K+ P+ E + E K
Sbjct: 19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 78
Query: 166 LL-WLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDV----------- 213
+L +L +H NIV+L+G C ++ EY G L L R+ R
Sbjct: 79 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL--RRKRDSFICSKTSPAIME 136
Query: 214 ----------LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLK 263
L+ ++ Q+A+GM +L A + IHRDL + N+LL+ + K
Sbjct: 137 DDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHG--------RITK 185
Query: 264 ITDFGLAREVYKTTHMSAAGTYA----WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GE 318
I DFGLAR++ ++ G WMAPE I +++ SDVWSYG+ LWEL + G
Sbjct: 186 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 245
Query: 319 IPYKSINAYAVAYGVAVNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNI 378
PY + + Y + + P P +M+ CW+AD RP+FK I++ +
Sbjct: 246 SPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305
Query: 379 VHSEF 383
+
Sbjct: 306 ISEST 310
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET;
nucleotide-binding, hirschsprung disease,
phosphorylation, disease mutation; HET: ACK; 2.00A {Homo
sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A*
2ivv_A*
Length = 314
Score = 234 bits (600), Expect = 2e-73
Identities = 93/313 (29%), Positives = 140/313 (44%), Gaps = 61/313 (19%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY-------EKQEVAIKVAHPNPDENILENVKQEGK 165
E L+ G+ +GEG FGKV K VA+K+ N + L ++ E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 166 LLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDV------------ 213
+L +H +++ L G C Q L L++EYA+ G L L R+ R
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL--RESRKVGPGYLGSGGSRNS 136
Query: 214 ---------------LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
L+ +A QI++GM YL A + L+HRDL + N+L++E
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEG------- 186
Query: 259 FKTLKITDFGLAREVYKTTHMSAAGTYA----WMAPEVIKTSIFSKASDVWSYGVVLWEL 314
+ +KI+DFGL+R+VY+ WMA E + I++ SDVWS+GV+LWE+
Sbjct: 187 -RKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 315 LT-GEIPYKSINAYAVAYGVAVNKLT----LPIPSTCPQLFKTLMEACWEADSHMRPSFK 369
+T G PY I + N L + P C + LM CW+ + RP F
Sbjct: 246 VTLGGNPYPGIPPERL-----FNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFA 300
Query: 370 TILKALNNIVHSE 382
I K L ++
Sbjct: 301 DISKDLEKMMVKR 313
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 235 bits (600), Expect = 3e-73
Identities = 80/337 (23%), Positives = 129/337 (38%), Gaps = 67/337 (19%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDH 172
+D + L E IG G +G VYKG +++ VA+KV + N ++ + L +H
Sbjct: 9 SLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVF-SFANRQNFIN-EKNIYRVPLMEH 66
Query: 173 RNIVSLIGVCL-----QSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNY 227
NI I + LVMEY G L + L+ A + G+ Y
Sbjct: 67 DNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAY 126
Query: 228 LHCQAPISL------IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT----- 276
LH + P HRDL S NVL+ D T I+DFGL+ +
Sbjct: 127 LHTELPRGDHYKPAISHRDLNSRNVLV-----KNDG---TCVISDFGLSMRLTGNRLVRP 178
Query: 277 -----THMSAAGTYAWMAPEVIKTSI-------FSKASDVWSYGVVLWELL---TGEIPY 321
+S GT +MAPEV++ ++ K D+++ G++ WE+ T P
Sbjct: 179 GEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPG 238
Query: 322 KSINAYAVAYG---------------VAVNKLTLPIPSTC------PQLFKTLMEACWEA 360
+S+ Y +A+ V+ K P + K +E CW+
Sbjct: 239 ESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQ 298
Query: 361 DSHMRPSFKTILKALNNIVHS-----EFIQTPHESFH 392
D+ R + + + + ++ T H H
Sbjct: 299 DAEARLTAQXAEERMAELMMIWERNKSVSPTAHHHHH 335
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 234 bits (600), Expect = 3e-73
Identities = 80/307 (26%), Positives = 119/307 (38%), Gaps = 41/307 (13%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY------EKQEVAIKVAHPNPDENILENVKQEGKL 166
+ L + +G+G FG V Y VA+K + + + ++E ++
Sbjct: 19 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ-QRDFQREIQI 77
Query: 167 LWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGPLNRVLAGRK--IRPDVLVDWAIQIA 222
L IV GV + L LVMEY G L L + + L+ ++ QI
Sbjct: 78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 137
Query: 223 EGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAA 282
+GM YL + +HRDL + N+L+ +KI DFGLA+ +
Sbjct: 138 KGMEYLGSR---RCVHRDLAARNILVESE--------AHVKIADFGLAKLLPLDKDYYVV 186
Query: 283 GTYA-----WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGVAVN 336
W APE + +IFS+ SDVWS+GVVL+EL T + + G +
Sbjct: 187 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERD 246
Query: 337 KLT-------------LPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEF 383
LP P CP LM+ CW RPSF + L+ +
Sbjct: 247 VPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306
Query: 384 IQTPHES 390
H
Sbjct: 307 GCETHAF 313
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; 2.40A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1xr0_A
Length = 370
Score = 236 bits (603), Expect = 3e-73
Identities = 91/307 (29%), Positives = 139/307 (45%), Gaps = 48/307 (15%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY---------EKQEVAIKVAHPNPDENILENVKQE 163
E +KL G+ +GEG FG+V E VA+K+ + E L ++ E
Sbjct: 77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 136
Query: 164 GKLLWLF-DHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDV--------- 213
+++ + H+NI++L+G C Q L +++EYA G L L R RP
Sbjct: 137 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL--RARRPPGMEYSYDINR 194
Query: 214 ----------LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLK 263
LV Q+A GM YL Q IHRDL + NVL++E +K
Sbjct: 195 VPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTEN--------NVMK 243
Query: 264 ITDFGLAREVYKTTHMSAAGTYA----WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GE 318
I DFGLAR++ + WMAPE + +++ SDVWS+GV++WE+ T G
Sbjct: 244 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 303
Query: 319 IPYKSINAYAVAYGVAVNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNI 378
PY I + + + P+ C +M CW A RP+FK +++ L+ I
Sbjct: 304 SPYPGIPVEELFKLLKEGHR-MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362
Query: 379 VHSEFIQ 385
+ +
Sbjct: 363 LTLTTNE 369
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 238 bits (609), Expect = 4e-73
Identities = 84/282 (29%), Positives = 134/282 (47%), Gaps = 31/282 (10%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIYEKQ-EVAIKVAHPNPDENILENVKQEGKLLWLFD 171
EI L + +G G FG+V+ Y K +VA+K P +E E ++
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS--VEAFLAEANVMKTLQ 241
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYL 228
H +V L V + P + ++ E+ G L + G K L+D++ QIAEGM ++
Sbjct: 242 HDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI 300
Query: 229 HCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---Y 285
+ + IHRDL+++N+L+S + KI DFGLAR + + + G
Sbjct: 301 EQR---NYIHRDLRAANILVSASL--------VCKIADFGLARVIEDNEYTAREGAKFPI 349
Query: 286 AWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGVAVNKLT----L 340
W APE I F+ SDVWS+G++L E++T G IPY ++ V + L +
Sbjct: 350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV-----IRALERGYRM 404
Query: 341 PIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSE 382
P P CP+ +M CW+ RP+F+ I L++ +
Sbjct: 405 PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446
Score = 50.1 bits (120), Expect = 1e-06
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 8/64 (12%)
Query: 37 ALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSSI 96
ALYDY+AI ++LS ++GD + VL + WW K K G P+N+V+ +
Sbjct: 13 ALYDYEAIHHEDLSFQKGDQMVVLEESG------EWW--KARSLATRKEGYIPSNYVARV 64
Query: 97 EDIN 100
+ +
Sbjct: 65 DSLE 68
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation,
signal transduction, MASS spectrometry, transferase;
2.05A {Rattus norvegicus} SCOP: d.144.1.7
Length = 343
Score = 234 bits (598), Expect = 8e-73
Identities = 94/309 (30%), Positives = 133/309 (43%), Gaps = 53/309 (17%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY-------EKQEVAIKVAHPNPDENILENVKQEGK 165
E N + + IGEG FG+V++ VA+K+ ++ + ++E
Sbjct: 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 166 LLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDV------------ 213
L+ FD+ NIV L+GVC +CL+ EY G LN L R + P
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFL--RSMSPHTVCSLSHSDLSTR 160
Query: 214 ---------------LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
+ A Q+A GM YL + +HRDL + N L+ E
Sbjct: 161 ARVSSPGPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGEN------- 210
Query: 259 FKTLKITDFGLAREVYKTTHMSAAGTYA----WMAPEVIKTSIFSKASDVWSYGVVLWEL 314
+KI DFGL+R +Y + A G A WM PE I + ++ SDVW+YGVVLWE+
Sbjct: 211 -MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269
Query: 315 LT-GEIPYKSINAYAVAYGVAVNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILK 373
+ G PY + V Y V + L P CP LM CW RPSF +I +
Sbjct: 270 FSYGLQPYYGMAHEEVIYYVRDGNI-LACPENCPLELYNLMRLCWSKLPADRPSFCSIHR 328
Query: 374 ALNNIVHSE 382
L +
Sbjct: 329 ILQRMCERA 337
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; HET: PTR ACP; 1.80A
{Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A*
2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A*
3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A*
3js2_A* 3ky2_A ...
Length = 334
Score = 233 bits (597), Expect = 1e-72
Identities = 91/307 (29%), Positives = 139/307 (45%), Gaps = 48/307 (15%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY---------EKQEVAIKVAHPNPDENILENVKQE 163
E +KL G+ +GEG FG+V E VA+K+ + E L ++ E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 164 GKLLWLF-DHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDV--------- 213
+++ + H+NI++L+G C Q L +++EYA G L L R RP
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL--RARRPPGMEYSYDINR 148
Query: 214 ----------LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLK 263
LV Q+A GM YL A IHRDL + NVL++E +K
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTEN--------NVMK 197
Query: 264 ITDFGLAREVYKTTHMSAAGTYA----WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GE 318
I DFGLAR++ + WMAPE + +++ SDVWS+GV++WE+ T G
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
Query: 319 IPYKSINAYAVAYGVAVNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNI 378
PY I + + + P+ C +M CW A RP+FK +++ L+ I
Sbjct: 258 SPYPGIPVEELFKLLKEGHR-MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
Query: 379 VHSEFIQ 385
+ +
Sbjct: 317 LTLTTNE 323
>3v5q_A NT-3 growth factor receptor; kinase domain, kinase,
phosphorylation, transferase-transfer inhibitor complex;
HET: 0F4; 2.20A {Homo sapiens}
Length = 297
Score = 230 bits (590), Expect = 4e-72
Identities = 91/300 (30%), Positives = 137/300 (45%), Gaps = 46/300 (15%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY-------EKQEVAIKVAHPNPDENILENVKQEGK 165
I ++ +GEG FGKV+ +K VA+K +P ++ ++E +
Sbjct: 11 HIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKAL-KDPTLAARKDFQREAE 69
Query: 166 LLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDV------------ 213
LL H +IV GVC L +V EY + G LN+ L R PD
Sbjct: 70 LLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFL--RAHGPDAMILVDGQPRQAK 127
Query: 214 -------LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITD 266
++ A QIA GM YL A +HRDL + N L+ +L +KI D
Sbjct: 128 GELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGA-----NL---LVKIGD 176
Query: 267 FGLAREVYKTTHMSAAGTYA----WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPY 321
FG++R+VY T + G WM PE I F+ SDVWS+GV+LWE+ T G+ P+
Sbjct: 177 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPW 236
Query: 322 KSINAYAVAYGVAVNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
++ V + ++ L P CP+ +M CW+ + R + K I K L+ + +
Sbjct: 237 FQLSNTEVIECITQGRV-LERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHALGKA 295
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment,
structural genomics, mutant, structural genomics
consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB:
2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A
2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A*
2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Length = 373
Score = 233 bits (596), Expect = 4e-72
Identities = 87/287 (30%), Positives = 132/287 (45%), Gaps = 33/287 (11%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY-----EKQEVAIKVAHPNPDENILENVKQEGKLL 167
E+D + + +G G FG+V G ++ VAIK E + E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 168 WLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVLVDWAIQIAEGM 225
FDH NI+ L GV +S + +V EY G L+ L + LV IA GM
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 226 NYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK---TTHMSAA 282
YL +HRDL + N+L++ + K++DFGL R + + +
Sbjct: 161 KYLSDM---GYVHRDLAARNILINSNL--------VCKVSDFGLGRVLEDDPEAAYTTRG 209
Query: 283 GTYA--WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGVAVNKLT 339
G W +PE I F+ ASDVWSYG+VLWE+++ GE PY ++ V + +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV-----IKAVD 264
Query: 340 ----LPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSE 382
LP P CP LM CW+ D + RP F+ I+ L+ ++ +
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP
binding, transferase-transfera inhibitor complex; HET:
046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A*
3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A*
3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A*
Length = 295
Score = 230 bits (589), Expect = 4e-72
Identities = 87/301 (28%), Positives = 130/301 (43%), Gaps = 52/301 (17%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY------EKQEVAIKVAHPNPDENILENVKQEGKL 166
+ + L F + +G+G FG V Y + VA+K + +E+ L + ++E ++
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH-LRDFEREIEI 64
Query: 167 LWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGPLNRVLAGRK--IRPDVLVDWAIQIA 222
L H NIV GVC + + L L+MEY G L L K I L+ + QI
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 124
Query: 223 EGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAA 282
+GM YL + IHRDL + N+L+ +KI DFGL + + +
Sbjct: 125 KGMEYLGTK---RYIHRDLATRNILVENE--------NRVKIGDFGLTKVLPQDKEFFKV 173
Query: 283 GTYA-----WMAPEVIKTSIFSKASDVWSYGVVLWELLT----------------GEIPY 321
W APE + S FS ASDVWS+GVVL+EL T G
Sbjct: 174 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 233
Query: 322 KSINAYAVAYGVAVNKLT----LPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNN 377
+ + + + L LP P CP +M CW + + RPSF+ + ++
Sbjct: 234 GQMIVFHL-----IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 288
Query: 378 I 378
I
Sbjct: 289 I 289
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis,
nucleotide-binding, inhibitor, phosphorylation receptor,
transferase, transmembrane; HET: 00J; 1.50A {Homo
sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A*
3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A*
2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A*
3cpc_A* ...
Length = 316
Score = 231 bits (591), Expect = 4e-72
Identities = 84/306 (27%), Positives = 135/306 (44%), Gaps = 46/306 (15%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY-------EKQEVAIKVAHPNPDENILENVKQEGK 165
E ++L G+ +G G FG+V + + VA+K+ + + E K
Sbjct: 23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 82
Query: 166 LLWLFD-HRNIVSLIGVCLQSPK-LCLVMEYARGGPLNRVLAGRKIRPDV---------- 213
+L H N+V+L+G C + L +++E+ + G L+ L R R +
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKVAPEDL 140
Query: 214 ---------LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKI 264
L+ ++ Q+A+GM +L A IHRDL + N+LLSE +KI
Sbjct: 141 YKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEK--------NVVKI 189
Query: 265 TDFGLAREVYKTTHMSAAGTYA----WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEI 319
DFGLAR++YK G WMAPE I +++ SDVWS+GV+LWE+ + G
Sbjct: 190 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 249
Query: 320 PYKSINAYAVAYGVAVNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIV 379
PY + + P M CW + RP+F +++ L N++
Sbjct: 250 PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309
Query: 380 HSEFIQ 385
+ Q
Sbjct: 310 QANAQQ 315
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding,
tyrosine-protein kinase, proto-oncogene, phosphoprotein,
disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo
sapiens}
Length = 326
Score = 231 bits (591), Expect = 6e-72
Identities = 87/301 (28%), Positives = 130/301 (43%), Gaps = 52/301 (17%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY------EKQEVAIKVAHPNPDENILENVKQEGKL 166
+ + L F + +G+G FG V Y + VA+K + +E+ L + ++E ++
Sbjct: 37 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH-LRDFEREIEI 95
Query: 167 LWLFDHRNIVSLIGVCLQSPK--LCLVMEYARGGPLNRVLAGRK--IRPDVLVDWAIQIA 222
L H NIV GVC + + L L+MEY G L L K I L+ + QI
Sbjct: 96 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 155
Query: 223 EGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAA 282
+GM YL + IHRDL + N+L+ +KI DFGL + + +
Sbjct: 156 KGMEYLGTK---RYIHRDLATRNILVENE--------NRVKIGDFGLTKVLPQDKEYYKV 204
Query: 283 GTYA-----WMAPEVIKTSIFSKASDVWSYGVVLWELLT----------------GEIPY 321
W APE + S FS ASDVWS+GVVL+EL T G
Sbjct: 205 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 264
Query: 322 KSINAYAVAYGVAVNKLT----LPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNN 377
+ + + + L LP P CP +M CW + + RPSF+ + ++
Sbjct: 265 GQMIVFHL-----IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 319
Query: 378 I 378
I
Sbjct: 320 I 320
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor;
HET: V4Z; 2.75A {Homo sapiens}
Length = 329
Score = 231 bits (590), Expect = 8e-72
Identities = 90/300 (30%), Positives = 133/300 (44%), Gaps = 45/300 (15%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY-------EKQEVAIKVAHPNPDENILENVKQEGK 165
I ++ +GEG FGKV+ +K VA+K + + + E +
Sbjct: 37 HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR-EAE 95
Query: 166 LLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDV------------ 213
LL + H++IV GVC + L +V EY R G LNR L R PD
Sbjct: 96 LLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFL--RSHGPDAKLLAGGEDVAPG 153
Query: 214 ------LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDF 267
L+ A Q+A GM YL A + +HRDL + N L+ + L +KI DF
Sbjct: 154 PLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLV-----GQGL---VVKIGDF 202
Query: 268 GLAREVYKTTHMSAAGTYA----WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYK 322
G++R++Y T + G WM PE I F+ SDVWS+GVVLWE+ T G+ P+
Sbjct: 203 GMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 262
Query: 323 SINAYAVAYGVAVNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSE 382
++ + + L P CP +M CW+ + R S K + L + +
Sbjct: 263 QLSNTEAIDCITQGRE-LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 236 bits (603), Expect = 8e-72
Identities = 86/282 (30%), Positives = 138/282 (48%), Gaps = 23/282 (8%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIYEKQE--VAIKVAHPNPDENILENVKQEGKLLWLF 170
E++ + +G G +G+VY+G+++K VA+K D +E +E ++
Sbjct: 216 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEI 273
Query: 171 DHRNIVSLIGVCLQSPKLCLVMEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNY 227
H N+V L+GVC + P ++ E+ G L R +++ VL+ A QI+ M Y
Sbjct: 274 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 333
Query: 228 LHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT--- 284
L + + IHR+L + N L+ E +K+ DFGL+R + T+ + AG
Sbjct: 334 LEKK---NFIHRNLAARNCLVGENH--------LVKVADFGLSRLMTGDTYTAHAGAKFP 382
Query: 285 YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGVAVNKLTLPIP 343
W APE + + FS SDVW++GV+LWE+ T G PY I+ V + + + P
Sbjct: 383 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MERP 441
Query: 344 STCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQ 385
CP+ LM ACW+ + RPSF I +A + I
Sbjct: 442 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSIS 483
Score = 54.0 bits (130), Expect = 6e-08
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 31 RPDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPA 90
P+L+ ALYD+ A G + LS+ +G+ + VL + + W + + G P+
Sbjct: 42 DPNLFVALYDFVASGDNTLSITKGEKLRVLGY----NHNGEWCEAQTKNGQ----GWVPS 93
Query: 91 NFVSSIEDIN 100
N+++ + +
Sbjct: 94 NYITPVNSLE 103
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 234 bits (599), Expect = 1e-71
Identities = 89/292 (30%), Positives = 134/292 (45%), Gaps = 32/292 (10%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIYEKQ-EVAIKVAHPNPDENILENVKQEGKLLWLFD 171
EI L +G+G FG+V+ G + VAIK P E QE +++
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLR 237
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYL 228
H +V L V + P + +V EY G L + G+ +R LVD A QIA GM Y+
Sbjct: 238 HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 296
Query: 229 HCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---Y 285
+ +HRDL+++N+L+ E K+ DFGLAR + + + G
Sbjct: 297 ERM---NYVHRDLRAANILVGEN--------LVCKVADFGLARLIEDNEYTARQGAKFPI 345
Query: 286 AWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGVAVNKLT----L 340
W APE F+ SDVWS+G++L EL T G +PY + V ++++ +
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV-----LDQVERGYRM 400
Query: 341 PIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQ-TPHESF 391
P P CP+ LM CW + RP+F+ + L + S Q P E+
Sbjct: 401 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGENL 452
Score = 50.9 bits (122), Expect = 6e-07
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 34 LWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFV 93
+ ALYDY++ +LS ++G+ +++++ + WW + G P+N+V
Sbjct: 4 TFVALYDYESRTETDLSFKKGERLQIVNNT-----EGDWW--LAHSLSTGQTGYIPSNYV 56
Query: 94 SSIEDIN 100
+ + I
Sbjct: 57 APSDSIQ 63
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 229 bits (585), Expect = 1e-71
Identities = 88/286 (30%), Positives = 137/286 (47%), Gaps = 31/286 (10%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIYEKQE--VAIKVAHPNPDENILENVKQEGKLLWLF 170
E++ + +G G +G+VY+G+++K VA+K + E +E +E ++
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEI 66
Query: 171 DHRNIVSLIGVCLQSPKLCLVMEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNY 227
H N+V L+GVC + P ++ E+ G L R +++ VL+ A QI+ M Y
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 228 LHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT--- 284
L + IHRDL + N L+ E +K+ DFGL+R + T+ + AG
Sbjct: 127 L---EKKNFIHRDLAARNCLVGEN--------HLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 285 YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGVAVNKLT---- 339
W APE + + FS SDVW++GV+LWE+ T G PY I+ V L
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV-----YELLEKDYR 230
Query: 340 LPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQ 385
+ P CP+ LM ACW+ + RPSF I +A + I
Sbjct: 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSIS 276
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition,
juxtamembrane domain, transferase; 2.10A {Homo sapiens}
SCOP: d.144.1.7
Length = 344
Score = 230 bits (588), Expect = 3e-71
Identities = 92/309 (29%), Positives = 134/309 (43%), Gaps = 52/309 (16%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY-------EKQEVAIKVAHPNPDENILENVKQEGK 165
E L FG+ +G G FGKV +VA+K+ D + E + E K
Sbjct: 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK 100
Query: 166 LLWLF-DHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDV----------- 213
++ H NIV+L+G C S + L+ EY G L L R R
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYL--RSKREKFSEDEIEYENQK 158
Query: 214 ---------------LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQ 258
L+ +A Q+A+GM +L S +HRDL + NVL++
Sbjct: 159 RLEEEEDLNVLTFEDLLCFAYQVAKGMEFL---EFKSCVHRDLAARNVLVTHG------- 208
Query: 259 FKTLKITDFGLAREVYKTTHMSAAGTYA----WMAPEVIKTSIFSKASDVWSYGVVLWEL 314
K +KI DFGLAR++ ++ G WMAPE + I++ SDVWSYG++LWE+
Sbjct: 209 -KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEI 267
Query: 315 LT-GEIPYKSINAYAVAYGVAVNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILK 373
+ G PY I A Y + N + P + +M++CW DS RPSF +
Sbjct: 268 FSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTS 327
Query: 374 ALNNIVHSE 382
L +
Sbjct: 328 FLGCQLADA 336
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain,
kinase inhibitor complex, transferase; HET: 5CN; 1.80A
{Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A*
3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Length = 333
Score = 229 bits (587), Expect = 3e-71
Identities = 88/312 (28%), Positives = 139/312 (44%), Gaps = 61/312 (19%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY-------EKQEVAIKVAHPNPDENILENVKQEGK 165
E N L FG+ +G G FGKV + +VA+K+ + E + E K
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 166 LL-WLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDV----------- 213
++ L H NIV+L+G C + ++ EY G L L R+ +
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL--RRKSRVLETDPAFAIANS 159
Query: 214 ------LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDF 267
L+ ++ Q+A+GM +L A + IHRD+ + NVLL+ KI DF
Sbjct: 160 TASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTN--------GHVAKIGDF 208
Query: 268 GLAREVYKTTHMSAAGTYA----WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYK 322
GLAR++ ++ G WMAPE I +++ SDVWSYG++LWE+ + G PY
Sbjct: 209 GLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY- 267
Query: 323 SINAYAVAYGVAVN-----KLT----LPIPSTCPQLFKTLMEACWEADSHMRPSFKTILK 373
G+ VN + + P+ P+ ++M+ACW + RP+F+ I
Sbjct: 268 --------PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS 319
Query: 374 ALNNIVHSEFIQ 385
L + +
Sbjct: 320 FLQEQAQEDRRE 331
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A
{Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A*
2p4i_A* 3l8p_A* 2wqb_A*
Length = 327
Score = 228 bits (584), Expect = 6e-71
Identities = 97/306 (31%), Positives = 135/306 (44%), Gaps = 60/306 (19%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIYEKQE----VAIKVAHPNPDENILENVKQEGKLL- 167
+D+N + F + IGEG FG+V K +K AIK ++ + E ++L
Sbjct: 21 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLC 80
Query: 168 WLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDV-------------- 213
L H NI++L+G C L L +EYA G L L RK R
Sbjct: 81 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL--RKSRVLETDPAFAIANSTAST 138
Query: 214 -----LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFG 268
L+ +A +A GM+YL + IHRDL + N+L+ E KI DFG
Sbjct: 139 LSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGEN--------YVAKIADFG 187
Query: 269 LAR--EVYKTTHMSAAGTYA-----WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIP 320
L+R EVY M WMA E + S+++ SDVWSYGV+LWE+++ G P
Sbjct: 188 LSRGQEVYVKKTM------GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 241
Query: 321 YKSINAYAVAYGVAVNKLT----LPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALN 376
Y + + KL L P C LM CW + RPSF IL +LN
Sbjct: 242 YCGMTCAEL-----YEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 296
Query: 377 NIVHSE 382
++
Sbjct: 297 RMLEER 302
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 234 bits (599), Expect = 9e-71
Identities = 87/285 (30%), Positives = 131/285 (45%), Gaps = 31/285 (10%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIYEKQ-EVAIKVAHPNPDENILENVKQEGKLLWLFD 171
EI L +G+G FG+V+ G + VAIK P E QE +++
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP--GTMSPEAFLQEAQVMKKLR 320
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYL 228
H +V L V + P + +V EY G L + G+ +R LVD A QIA GM Y+
Sbjct: 321 HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 379
Query: 229 HCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT---Y 285
+ +HRDL+++N+L+ E K+ DFGLAR + + + G
Sbjct: 380 ERM---NYVHRDLRAANILVGEN--------LVCKVADFGLARLIEDNEYTARQGAKFPI 428
Query: 286 AWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGVAVNKLT----L 340
W APE F+ SDVWS+G++L EL T G +PY + V ++++ +
Sbjct: 429 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV-----LDQVERGYRM 483
Query: 341 PIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQ 385
P P CP+ LM CW + RP+F+ + L + S Q
Sbjct: 484 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 528
Score = 45.6 bits (108), Expect = 3e-05
Identities = 15/71 (21%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 30 HRPDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFP 89
+ ALYDY++ +LS ++G+ +++++ + WW + G P
Sbjct: 83 GGVTTFVALYDYESRTETDLSFKKGERLQIVNNT-----EGDWW--LAHSLSTGQTGYIP 135
Query: 90 ANFVSSIEDIN 100
+N+V+ + I
Sbjct: 136 SNYVAPSDSIQ 146
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain,
transferase, transferase-transferase inhibito; HET: 07J;
2.80A {Homo sapiens}
Length = 382
Score = 228 bits (583), Expect = 4e-70
Identities = 93/307 (30%), Positives = 143/307 (46%), Gaps = 48/307 (15%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY---------EKQEVAIKVAHPNPDENILENVKQE 163
E+ ++L+ G+ +GEG FG+V +VA+K+ + E L ++ E
Sbjct: 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 124
Query: 164 GKLLWLF-DHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDV--------- 213
+++ + H+NI++L+G C Q L +++EYA G L L + RP
Sbjct: 125 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL--QARRPPGLEYSYNPSH 182
Query: 214 ----------LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLK 263
LV A Q+A GM YL A IHRDL + NVL++E +K
Sbjct: 183 NPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTED--------NVMK 231
Query: 264 ITDFGLAREVYKTTHMSAAGTYA----WMAPEVIKTSIFSKASDVWSYGVVLWELLT-GE 318
I DFGLAR+++ + WMAPE + I++ SDVWS+GV+LWE+ T G
Sbjct: 232 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 291
Query: 319 IPYKSINAYAVAYGVAVNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNI 378
PY + + + + PS C +M CW A RP+FK +++ L+ I
Sbjct: 292 SPYPGVPVEELFKLLKEGHR-MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350
Query: 379 VHSEFIQ 385
V Q
Sbjct: 351 VALTSNQ 357
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 223 bits (569), Expect = 8e-69
Identities = 76/321 (23%), Positives = 117/321 (36%), Gaps = 51/321 (15%)
Query: 103 SSVINDVKLVEIDYNKLIFGEAIGEGGFGKVYKGIYEKQEVAIKVAHPNPDENILENVKQ 162
S V + + L E G FG V+K + VA+K+ D+ +N +
Sbjct: 10 SGVDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQ-DKQSWQN-EY 67
Query: 163 EGKLLWLFDHRNIVSLIGVCLQSPK----LCLVMEYARGGPLNRVLAGRKIRPDVLVDWA 218
E L H NI+ IG + L L+ + G L+ L + + L A
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIA 127
Query: 219 IQIAEGMNYLHCQAPISL-------IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR 271
+A G+ YLH P HRD+KS NVLL + T I DFGLA
Sbjct: 128 ETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNL--------TACIADFGLAL 179
Query: 272 --EVYKTTH--MSAAGTYAWMAPEVIKTSI-----FSKASDVWSYGVVLWELLTGEIPYK 322
E K+ GT +MAPEV++ +I D+++ G+VLWEL +
Sbjct: 180 KFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
Query: 323 SIN-AYAVAYG---------------VAVNKLTLPIPSTCP-----QLFKTLMEACWEAD 361
Y + + V K + + +E CW+ D
Sbjct: 240 GPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHD 299
Query: 362 SHMRPSFKTILKALNNIVHSE 382
+ R S + + + +
Sbjct: 300 AEARLSAGCVGERITQMQRLT 320
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 230 bits (588), Expect = 2e-68
Identities = 90/290 (31%), Positives = 137/290 (47%), Gaps = 34/290 (11%)
Query: 110 KLVEIDYNKLIFGEA-IGEGGFGKVYKGIY----EKQEVAIKVAHPNPDENILENVKQEG 164
K + + + L+ + +G G FG V +G+Y ++ +VAIKV ++ E + +E
Sbjct: 328 KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA 387
Query: 165 KLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVLVDWAIQIA 222
+++ D+ IV LIGVC L LVME A GGPL++ L +I + + Q++
Sbjct: 388 QIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVS 446
Query: 223 EGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK-----TT 277
GM YL + + +HR+L + NVLL KI+DFGL++ + T
Sbjct: 447 MGMKYLEEK---NFVHRNLAARNVLLVNR--------HYAKISDFGLSKALGADDSYYTA 495
Query: 278 HMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGVAVN 336
+ W APE I FS SDVWSYGV +WE L+ G+ PYK + V +
Sbjct: 496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV-----MA 550
Query: 337 KLT----LPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSE 382
+ + P CP LM CW RP F T+ + + +S
Sbjct: 551 FIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 600
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 189 bits (481), Expect = 2e-55
Identities = 66/267 (24%), Positives = 130/267 (48%), Gaps = 23/267 (8%)
Query: 115 DYNKLIFGEAIGEGGFGKVYKG--IYEKQEVAIK-VAHPNPDENILENVKQEGKLLWLFD 171
Y +L + IGEG FGK + ++ IK + E ++E +L
Sbjct: 25 KYVRL---QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK 81
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRP---DVLVDWAIQIAEGMNYL 228
H NIV ++ L +VM+Y GG L + + +K D ++DW +QI + ++
Sbjct: 82 HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV 141
Query: 229 HCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM--SAAGTYA 286
H + ++HRD+KS N+ L++ T+++ DFG+AR + T + + GT
Sbjct: 142 HDR---KILHRDIKSQNIFLTKD--------GTVQLGDFGIARVLNSTVELARACIGTPY 190
Query: 287 WMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNKLTLPIPSTC 346
+++PE+ + ++ SD+W+ G VL+EL T + +++ + + + ++ P+
Sbjct: 191 YLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKI-ISGSFPPVSLHY 249
Query: 347 PQLFKTLMEACWEADSHMRPSFKTILK 373
++L+ ++ + RPS +IL+
Sbjct: 250 SYDLRSLVSQLFKRNPRDRPSVNSILE 276
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 186 bits (474), Expect = 3e-55
Identities = 72/262 (27%), Positives = 114/262 (43%), Gaps = 18/262 (6%)
Query: 121 FGEAIGEGGFGKVYKGI--YEKQEVAIK-VAHPNPDENILENVKQEGKLLWLFDHRNIVS 177
F IG G F VYKG+ EVA + ++ + K+E ++L H NIV
Sbjct: 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVR 89
Query: 178 LIGVCLQSPK----LCLVMEYARGGPLNRVL-AGRKIRPDVLVDWAIQIAEGMNYLHCQA 232
+ K + LV E G L L + ++ VL W QI +G+ +LH +
Sbjct: 90 FYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT 149
Query: 233 PISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEV 292
P +IHRDLK N+ ++ P + +KI D GLA + + GT +MAPE+
Sbjct: 150 P-PIIHRDLKCDNIFITGPTGS-------VKIGDLGLATLKRASFAKAVIGTPEFMAPEM 201
Query: 293 IKTSIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNK-LTLPIPSTCPQLFK 351
+ + ++ DV+++G+ + E+ T E PY A Y + K
Sbjct: 202 YEEK-YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVK 260
Query: 352 TLMEACWEADSHMRPSFKTILK 373
++E C + R S K +L
Sbjct: 261 EIIEGCIRQNKDERYSIKDLLN 282
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 186 bits (473), Expect = 5e-54
Identities = 82/367 (22%), Positives = 138/367 (37%), Gaps = 44/367 (11%)
Query: 103 SSVINDVKLVEIDYNKLIFGEAIGEGGFGKVYKGIYE-KQEVAIK-VAHPNPDENILENV 160
SS + + Y+ + IG GG KV++ + E KQ AIK V D L++
Sbjct: 45 SSANECISVKGRIYSI---LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSY 101
Query: 161 KQEGKLLWLFDH--RNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVDW 217
+ E L I+ L + + +VME LN L +K I P +
Sbjct: 102 RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSY 160
Query: 218 AIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT 277
+ E ++ +H ++H DLK +N L+ + LK+ DFG+A ++ T
Sbjct: 161 WKNMLEAVHTIHQH---GIVHSDLKPANFLIVD---------GMLKLIDFGIANQMQPDT 208
Query: 278 HM----SAAGTYAWMAPEVIK-----------TSIFSKASDVWSYGVVLWELLTGEIPYK 322
S G +M PE IK S S SDVWS G +L+ + G+ P++
Sbjct: 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
Query: 323 SI-NAYAVAYGVAVNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHS 381
I N + + + + P + + +++ C + D R S +L H
Sbjct: 269 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA------H- 321
Query: 382 EFIQTPHESFHIMQDGWRVEIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELRERE 441
++Q + M G E++ VL +L + T + +
Sbjct: 322 PYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSILKAAKTLYEHYSGGESHNSSSSK 381
Query: 442 QAVAARE 448
R
Sbjct: 382 TFEKKRG 388
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 184 bits (468), Expect = 9e-54
Identities = 82/349 (23%), Positives = 136/349 (38%), Gaps = 45/349 (12%)
Query: 109 VKLVEIDYNKLIFGEAIGEGGFGKVYKGIYE-KQEVAIK-VAHPNPDENILENVKQEGKL 166
+ + Y+ + IG GG KV++ + E KQ AIK V D L++ + E
Sbjct: 4 ISVKGRIYSI---LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 60
Query: 167 LWLFDH--RNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVDWAIQIAE 223
L I+ L + + +VME LN L +K I P + + E
Sbjct: 61 LNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLE 119
Query: 224 GMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM---- 279
++ +H ++H DLK +N L+ + LK+ DFG+A ++ T
Sbjct: 120 AVHTIHQH---GIVHSDLKPANFLIVD---------GMLKLIDFGIANQMQPDTTSVVKD 167
Query: 280 SAAGTYAWMAPEVIK-----------TSIFSKASDVWSYGVVLWELLTGEIPYKSI-NAY 327
S GT +M PE IK S S SDVWS G +L+ + G+ P++ I N
Sbjct: 168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 227
Query: 328 AVAYGVAVNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQTP 387
+ + + + P + + +++ C + D R S +L H ++Q
Sbjct: 228 SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA------H-PYVQIQ 280
Query: 388 HESFHIMQDGWRVEIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKE 436
+ M G E++ VL +L V S + E
Sbjct: 281 THPVNQMAKGTTEEMKYVLGQL-VGLNSPNSILKAAKTLYEHYSGGESH 328
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 179 bits (456), Expect = 3e-52
Identities = 71/292 (24%), Positives = 120/292 (41%), Gaps = 37/292 (12%)
Query: 103 SSVINDVKLVEIDYNKLIFGEAIGEGGFGKVYKGIYE-KQEVAIK-VAHPNPDENILENV 160
+ + + Y+ + IG GG KV++ + E KQ AIK V D L++
Sbjct: 17 NLYFQSMSVKGRIYSI---LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSY 73
Query: 161 KQEGKLLWLFDHRN--IVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVDW 217
+ E L + I+ L + + +VME LN L +K I P +
Sbjct: 74 RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSY 132
Query: 218 AIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT 277
+ E ++ +H ++H DLK +N L+ + LK+ DFG+A ++ T
Sbjct: 133 WKNMLEAVHTIHQH---GIVHSDLKPANFLIVD---------GMLKLIDFGIANQMQPDT 180
Query: 278 HM----SAAGTYAWMAPEVIK-----------TSIFSKASDVWSYGVVLWELLTGEIPYK 322
S GT +M PE IK S S SDVWS G +L+ + G+ P++
Sbjct: 181 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 240
Query: 323 SI-NAYAVAYGVAVNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILK 373
I N + + + + P + + +++ C + D R S +L
Sbjct: 241 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 178 bits (454), Expect = 5e-52
Identities = 73/313 (23%), Positives = 128/313 (40%), Gaps = 46/313 (14%)
Query: 110 KLVEIDYNKLIFGEAIGEGGFGKVY--KGIYEKQEVAIK-VAHPNPDENILENVKQEGKL 166
+V ID +F + +GEGGF V +G+++ A+K + + E ++E +
Sbjct: 22 HMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQD--REEAQREADM 79
Query: 167 LWLFDHRNIVSLIGVCLQSP----KLCLVMEYARGGPLNRVLAGRKIRPDVL-----VDW 217
LF+H NI+ L+ CL+ + L++ + + G L + K + + L +
Sbjct: 80 HRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWL 139
Query: 218 AIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT 277
+ I G+ +H + HRDLK +N+LL + + D G +
Sbjct: 140 LLGICRGLEAIHAK-GY--AHRDLKPTNILLGDE--------GQPVLMDLGSMNQACIHV 188
Query: 278 HMSAA-----------GTYAWMAPEVIKT---SIFSKASDVWSYGVVLWELLTGEIPYKS 323
S T ++ APE+ + + +DVWS G VL+ ++ GE PY
Sbjct: 189 EGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248
Query: 324 INAYAVAYGVAV-NKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSE 382
+ + +AV N+L++P L+ + D H RP +L E
Sbjct: 249 VFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLS------QLE 302
Query: 383 FIQTPHESFHIMQ 395
+Q P H Q
Sbjct: 303 ALQPPAPGQHTTQ 315
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 178 bits (453), Expect = 6e-52
Identities = 65/292 (22%), Positives = 123/292 (42%), Gaps = 29/292 (9%)
Query: 115 DYNKLIFGEAIGEGGFGKVYKG--IYEKQEVAIKV--AHPNPDENILENVKQEGKLLWLF 170
++ + IG G F +VY+ + + VA+K D + +E LL
Sbjct: 33 NFRIE---KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL 89
Query: 171 DHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL-----AGRKIRPDVLVDWAIQIAEGM 225
+H N++ ++ +L +V+E A G L+R++ R I + + +Q+ +
Sbjct: 90 NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSAL 149
Query: 226 NYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM--SAAG 283
++H + ++HRD+K +NV ++ +K+ D GL R T S G
Sbjct: 150 EHMHSR---RVMHRDIKPANVFITAT--------GVVKLGDLGLGRFFSSKTTAAHSLVG 198
Query: 284 TYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPY--KSINAYAVAYGVAVNKLTLP 341
T +M+PE I + ++ SD+WS G +L+E+ + P+ +N Y++ + P
Sbjct: 199 TPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI-EQCDYPP 257
Query: 342 IPSTC-PQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFH 392
+PS + + L+ C D RP + + H H
Sbjct: 258 LPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSLEHHHHH 309
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 175 bits (447), Expect = 3e-51
Identities = 77/295 (26%), Positives = 132/295 (44%), Gaps = 29/295 (9%)
Query: 107 NDVKLVEIDYNKLIFGEAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQEG 164
+D+ + +Y++ +G+G +G VY G +AIK P D + + +E
Sbjct: 12 SDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEI-PERDSRYSQPLHEEI 70
Query: 165 KLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGR----KIRPDVLVDWAIQ 220
L H+NIV +G ++ + + ME GG L+ +L + K + + Q
Sbjct: 71 ALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ 130
Query: 221 IAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV--YKTTH 278
I EG+ YLH ++HRD+K NVL+ + LKI+DFG ++ +
Sbjct: 131 ILEGLKYLHDN---QIVHRDIKGDNVLI-------NTYSGVLKISDFGTSKRLAGINPCT 180
Query: 279 MSAAGTYAWMAPEVIKTSI--FSKASDVWSYGVVLWELLTGEIPYKSI-NAYAVAYGVAV 335
+ GT +MAPE+I + KA+D+WS G + E+ TG+ P+ + A + V +
Sbjct: 181 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGM 240
Query: 336 NKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQTPHES 390
K+ IP + K + C+E D R +L EF++ +
Sbjct: 241 FKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV------D-EFLKVSSKK 288
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 174 bits (443), Expect = 7e-51
Identities = 66/273 (24%), Positives = 115/273 (42%), Gaps = 26/273 (9%)
Query: 115 DYNKLIFGEAIGEGGFGKVYKG--IYEKQEVAIK-VAHPNPDENILENVKQEGKLLWLFD 171
DY L IG G +G+ K + + + K + + + E + + E LL
Sbjct: 7 DYEVL---YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK 63
Query: 172 HRNIVSLIG--VCLQSPKLCLVMEYARGGPLNRVL-----AGRKIRPDVLVDWAIQIAEG 224
H NIV + + L +VMEY GG L V+ + + + ++ Q+
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 225 MNYLH--CQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM--S 280
+ H +++HRDLK +NV L + +K+ DFGLAR + T +
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGK--------QNVKLGDFGLARILNHDTSFAKT 175
Query: 281 AAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNKLTL 340
GT +M+PE + +++ SD+WS G +L+EL P+ + + +A +
Sbjct: 176 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI-REGKFR 234
Query: 341 PIPSTCPQLFKTLMEACWEADSHMRPSFKTILK 373
IP ++ + RPS + IL+
Sbjct: 235 RIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK,
transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB:
2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Length = 307
Score = 172 bits (438), Expect = 9e-50
Identities = 79/206 (38%), Positives = 104/206 (50%), Gaps = 27/206 (13%)
Query: 125 IGEGGFGKVYKGIYEKQEVAIKVAHPNPDENILENVKQ---EGKLLWLFDHRNIVSLIGV 181
+GEGGFG VYKG VA+K D E +Q E K++ H N+V L+G
Sbjct: 39 MGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 98
Query: 182 CLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDW------AIQIAEGMNYLHCQAPIS 235
LCLV Y G L L+ P L W A A G+N+LH
Sbjct: 99 SSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-PL-SWHMRCKIAQGAANGINFLHEN---H 153
Query: 236 LIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE--VYKTTHMSA--AGTYAWMAPE 291
IHRD+KS+N+LL D F T KI+DFGLAR + T M++ GT A+MAPE
Sbjct: 154 HIHRDIKSANILL-------DEAF-TAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPE 205
Query: 292 VIKTSIFSKASDVWSYGVVLWELLTG 317
+ + SD++S+GVVL E++TG
Sbjct: 206 AL-RGEITPKSDIYSFGVVLLEIITG 230
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 171 bits (436), Expect = 9e-50
Identities = 72/282 (25%), Positives = 119/282 (42%), Gaps = 49/282 (17%)
Query: 115 DYNKLIFGEAIGEGGFGKVYKG--IYEKQEVAIK-VAHPNPDENILENVKQEGKLLWLFD 171
D+ ++ E IG GGFG+V+K + + IK V + N E ++E K L D
Sbjct: 12 DFKEI---ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLD 62
Query: 172 HRNIVSLIG----------------VCLQSPKLCLVMEYARGGPLNRVLAGRKIRP---D 212
H NIV G ++ L + ME+ G L + + R+
Sbjct: 63 HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV 122
Query: 213 VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE 272
+ ++ QI +G++Y+H + LI+RDLK SN+ L + K +KI DFGL
Sbjct: 123 LALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDT--------KQVKIGDFGLVTS 171
Query: 273 VYKTT-HMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAY 331
+ + GT +M+PE I + + K D+++ G++L ELL +
Sbjct: 172 LKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK----- 226
Query: 332 GVAVNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILK 373
+ I + KTL++ RP+ IL+
Sbjct: 227 -FFTDLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILR 267
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 172 bits (438), Expect = 2e-49
Identities = 59/288 (20%), Positives = 105/288 (36%), Gaps = 27/288 (9%)
Query: 97 EDINLVSSVINDVKLVEIDYNKLIFGEAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDE 154
E + L + + + + +G G FG+V++ ++ + A+K
Sbjct: 38 EGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKV------ 91
Query: 155 NILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL-AGRKIRPDV 213
+ +E IV L G + P + + ME GG L +++ + D
Sbjct: 92 RLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR 151
Query: 214 LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV 273
+ + Q EG+ YLH + ++H D+K+ NVLL + DFG A +
Sbjct: 152 ALYYLGQALEGLEYLHTR---RILHGDVKADNVLL-------SSDGSRAALCDFGHALCL 201
Query: 274 YK-------TTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINA 326
T GT MAPEV+ D+WS ++ +L G P+
Sbjct: 202 QPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR 261
Query: 327 YAVAYGVAVN-KLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILK 373
+ +A IP +C L ++ + R S + +
Sbjct: 262 GPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRR 309
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 167 bits (426), Expect = 3e-48
Identities = 58/274 (21%), Positives = 104/274 (37%), Gaps = 32/274 (11%)
Query: 122 GEAIGEGGFGKVYKGIY--EKQEVAIK-VAHPNPDENILENVKQE-GKLLWLFDHRNIVS 177
E IG G FG V+K + + AIK P +N +E L H ++V
Sbjct: 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR 75
Query: 178 LIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRP-----DVLVDWAIQIAEGMNYLHCQA 232
+ + + EY GG L ++ L D +Q+ G+ Y+H
Sbjct: 76 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM- 134
Query: 233 PISLIHRDLKSSNVLLSE-----------PIENEDLQFKTLKITDFGLAREVYKTTHMSA 281
SL+H D+K SN+ +S ++ KI D G + ++
Sbjct: 135 --SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRI--SSPQVE 190
Query: 282 AGTYAWMAPEVIKTSI-FSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNKLTL 340
G ++A EV++ + +D+++ + + E ++ + + + + L
Sbjct: 191 EGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWH-----EIRQGRL 245
Query: 341 P-IPSTCPQLFKTLMEACWEADSHMRPSFKTILK 373
P IP Q F L++ D RPS ++K
Sbjct: 246 PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 164 bits (418), Expect = 8e-47
Identities = 51/280 (18%), Positives = 101/280 (36%), Gaps = 33/280 (11%)
Query: 115 DYNKLIFGEAIGEGGFGKVYKGIY--EKQEVAIKV--AHPNPDENILENVKQEGKLLWLF 170
+ +L +G G +G+V+K + + A+K + ++ + + G +
Sbjct: 58 SFQRL---SRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVG 114
Query: 171 DHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVLVDWAIQIAEGMNYL 228
H V L + L L E G L + G + + + + +L
Sbjct: 115 QHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHL 173
Query: 229 HCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM-SAAGTYAW 287
H Q L+H D+K +N+ L K+ DFGL E+ G +
Sbjct: 174 HSQ---GLVHLDVKPANIFLG--------PRGRCKLGDFGLLVELGTAGAGEVQEGDPRY 222
Query: 288 MAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNKLTLPIPSTCP 347
MAPE+++ S + A+DV+S G+ + E+ + L +
Sbjct: 223 MAPELLQGS-YGTAADVFSLGLTILEVACNMELPHGGEGWQQLR---QGYLPPEFTAGLS 278
Query: 348 QLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQTP 387
++++ E D +R + + +L ++ P
Sbjct: 279 SELRSVLVMMLEPDPKLRATAEALLA------LP-VLRQP 311
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex,
layered beta- sheets, transferas; HET: SEP TPO; 3.20A
{Solanum pimpinellifolium} PDB: 3hgk_A*
Length = 321
Score = 161 bits (409), Expect = 2e-45
Identities = 87/284 (30%), Positives = 133/284 (46%), Gaps = 39/284 (13%)
Query: 125 IGEGGFGKVYKG-IYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCL 183
IG G FGKVYKG + + +VA+K P + I E + E + L H ++VSLIG C
Sbjct: 47 IGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEE-FETEIETLSFCRHPHLVSLIGFCD 105
Query: 184 QSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDW------AIQIAEGMNYLHCQAPISLI 237
+ ++ L+ +Y G L R L G + + W I A G++YLH +A +I
Sbjct: 106 ERNEMILIYKYMENGNLKRHLYGSDLPTMSM-SWEQRLEICIGAARGLHYLHTRA---II 161
Query: 238 HRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE--VYKTTHMS--AAGTYAWMAPEVI 293
HRD+KS N+LL +E+ KITDFG++++ TH+S GT ++ PE
Sbjct: 162 HRDVKSINILL-----DENF---VPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYF 213
Query: 294 KTSIFSKASDVWSYGVVLWELLTG------EIPYKSIN--AYAVAY-------GVAVNKL 338
++ SDV+S+GVVL+E+L +P + +N +AV + L
Sbjct: 214 IKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNL 273
Query: 339 TLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSE 382
I + F C S RPS +L L + +
Sbjct: 274 ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 160 bits (406), Expect = 3e-45
Identities = 66/306 (21%), Positives = 121/306 (39%), Gaps = 58/306 (18%)
Query: 121 FGEAIGEGGFGKVYKG--IYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSL 178
+G+G FG+V K + + AIK E L + E LL +H+ +V
Sbjct: 10 EIAVLGQGAFGQVVKARNALDSRYYAIKKI--RHTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 179 IGV-------------CLQSPKLCLVMEYARGGPLNRVLA--GRKIRPDVLVDWAIQIAE 223
+ L + MEY G L ++ + D QI E
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 224 GMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM---- 279
++Y+H Q +IHRDLK N+ + E + +KI DFGLA+ V+++ +
Sbjct: 128 ALSYIHSQ---GIIHRDLKPMNIFIDES--------RNVKIGDFGLAKNVHRSLDILKLD 176
Query: 280 ------------SAAGTYAWMAPEVIK-TSIFSKASDVWSYGVVLWELLTGEIPYKSINA 326
SA GT ++A EV+ T +++ D++S G++ +E++ +
Sbjct: 177 SQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP--FSTGMER 234
Query: 327 YAVAYGVAVNKLTLP--IPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFI 384
+ + + P ++ K ++ + D + RP +T+L S ++
Sbjct: 235 VNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN-------SGWL 287
Query: 385 QTPHES 390
H+
Sbjct: 288 PVKHQD 293
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 161 bits (409), Expect = 4e-45
Identities = 67/285 (23%), Positives = 124/285 (43%), Gaps = 16/285 (5%)
Query: 110 KLVEIDYNKLIFGEAIGEGGFGKVYKGIYE--KQEVAIKVAHPNPDENILENVKQEGKLL 167
K+ E+ + +G G G V+K ++ +A K+ H I + +E ++L
Sbjct: 26 KVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 85
Query: 168 WLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL-AGRKIRPDVLVDWAIQIAEGMN 226
+ IV G ++ + ME+ GG L++VL +I +L +I + +G+
Sbjct: 86 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 145
Query: 227 YLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYA 286
YL + I +HRD+K SN+L++ E +K+ DFG++ ++ + S GT +
Sbjct: 146 YLREKHKI--MHRDVKPSNILVNSRGE--------IKLCDFGVSGQLIDSMANSFVGTRS 195
Query: 287 WMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNKLTLPIPSTC 346
+M+PE ++ + +S SD+WS G+ L E+ G P +A + +
Sbjct: 196 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPP 255
Query: 347 PQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESF 391
+ DS I + L+ IV+ + P F
Sbjct: 256 RPRTPGRPLNKFGMDSR---PPMAIFELLDYIVNEPPPKLPSGVF 297
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 159 bits (403), Expect = 7e-45
Identities = 67/304 (22%), Positives = 111/304 (36%), Gaps = 56/304 (18%)
Query: 115 DYNKLIFGEAIGEGGFGKVYKG--IYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDH 172
D+ + + +G GGFG V++ + AIK E E V +E K L +H
Sbjct: 6 DFEPI---QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEH 62
Query: 173 RNIVSLIGVCL------------QSPKLCLVMEYARGGPLNRVLAGRKIRP----DVLVD 216
IV L L + M+ R L + GR V +
Sbjct: 63 PGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLH 122
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
+QIAE + +LH + L+HRDLK SN+ + +K+ DFGL + +
Sbjct: 123 IFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTM--------DDVVKVGDFGLVTAMDQD 171
Query: 277 T--------------HMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYK 322
H GT +M+PE I + +S D++S G++L+ELL P+
Sbjct: 172 EEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFS 228
Query: 323 SINAYAVAYGVAVNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSE 382
+ N P+ + +++ RP I++ +
Sbjct: 229 TQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE-------NA 281
Query: 383 FIQT 386
+
Sbjct: 282 VFED 285
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 157 bits (398), Expect = 1e-43
Identities = 69/311 (22%), Positives = 121/311 (38%), Gaps = 49/311 (15%)
Query: 110 KLVEIDYNKLIFGEAIGEGGFGKVY--KGIYEKQEVAIKVAHPNPDENILENVKQEGKLL 167
+ VE+ +L + EGGF VY + + +E A+K N +E + QE +
Sbjct: 21 QTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN-EEEKNRAIIQEVCFM 79
Query: 168 -WLFDHRNIVSLIGVCLQSPK--------LCLVMEYARGG---PLNRVLAGRKIRPDVLV 215
L H NIV + L+ E +G L ++ + + D ++
Sbjct: 80 KKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVL 139
Query: 216 DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK 275
Q + ++H Q P +IHRDLK N+LLS T+K+ DFG A +
Sbjct: 140 KIFYQTCRAVQHMHRQKP-PIIHRDLKVENLLLSNQ--------GTIKLCDFGSATTISH 190
Query: 276 TTHMSAA--------------GTYAWMAPEVIKTSIFSKA-----SDVWSYGVVLWELLT 316
S + T + PE+I ++S D+W+ G +L+ L
Sbjct: 191 YPDYSWSAQRRALVEEEITRNTTPMYRTPEII--DLYSNFPIGEKQDIWALGCILYLLCF 248
Query: 317 GEIPYKSINAYAVAYGVAVNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALN 376
+ P++ + G K ++P T +F +L+ A + + R S ++ L
Sbjct: 249 RQHPFEDGAKLRIVNG----KYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304
Query: 377 NIVHSEFIQTP 387
I + +
Sbjct: 305 EIAAARNVNPK 315
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 156 bits (397), Expect = 5e-43
Identities = 72/374 (19%), Positives = 136/374 (36%), Gaps = 57/374 (15%)
Query: 120 IFGEAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVS 177
+ + +G+G V++G ++K AIKV + ++ +E ++L +H+NIV
Sbjct: 12 LLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVK 71
Query: 178 LIGV--CLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAI----QIAEGMNYLHCQ 231
L + + L+ME+ G L VL + + + GMN+L
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131
Query: 232 APISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM-SAAGTYAWMAP 290
++HR++K N++ + + K+TDFG ARE+ S GT ++ P
Sbjct: 132 ---GIVHRNIKPGNIMRVIGEDGQ----SVYKLTDFGAARELEDDEQFVSLYGTEEYLHP 184
Query: 291 EVIKTSI--------FSKASDVWSYGVVLWELLTGEIP--------------YKSIN--- 325
++ + ++ + D+WS GV + TG +P YK I
Sbjct: 185 DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244
Query: 326 ------AYAVAYGVAVNKLTLPIPSTCPQLFKTLMEA----CWEADSHMRPSFKTILKAL 375
G +P+ + + + L+ EAD F
Sbjct: 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304
Query: 376 NNIVHSEFIQTPHESFHIMQDGWRVEIEQVLHELRVKEKELRSREEELTKAQMQQKLAEK 435
++I+H I +Q +I + EL ++ + + Q+ + E
Sbjct: 305 SDILHRMVIHVFS-----LQQMTAHKIYIHSYNTATIFHELVYKQTK-IISSNQELIYEG 358
Query: 436 ELREREQAVAAREI 449
E A+
Sbjct: 359 RRLVLEPGRLAQHF 372
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 154 bits (390), Expect = 9e-43
Identities = 63/305 (20%), Positives = 115/305 (37%), Gaps = 51/305 (16%)
Query: 120 IFGEAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVS 177
+ + +G+G V++G ++K AIKV + ++ +E ++L +H+NIV
Sbjct: 12 LLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVK 71
Query: 178 LIGV--CLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAI----QIAEGMNYLHCQ 231
L + + L+ME+ G L VL + + + GMN+L
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131
Query: 232 APISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM-SAAGTYAWMAP 290
++HR++K N++ + + K+TDFG ARE+ S GT ++ P
Sbjct: 132 ---GIVHRNIKPGNIMRVIGEDGQ----SVYKLTDFGAARELEDDEQFVSLYGTEEYLHP 184
Query: 291 EVIKTSI--------FSKASDVWSYGVVLWELLTGEIP--------------YKSIN--- 325
++ + ++ + D+WS GV + TG +P YK I
Sbjct: 185 DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244
Query: 326 ------AYAVAYGVAVNKLTLP----IPSTCPQLFKTLMEACWEADSHMRPSFKTILKAL 375
G +P + L ++ EAD F
Sbjct: 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304
Query: 376 NNIVH 380
++I+H
Sbjct: 305 SDILH 309
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein
kinase, transferase; HET: SEP TPO ANP; 2.20A
{Arabidopsis thaliana} PDB: 3tl8_A*
Length = 326
Score = 153 bits (389), Expect = 1e-42
Identities = 72/211 (34%), Positives = 106/211 (50%), Gaps = 35/211 (16%)
Query: 125 IGEGGFGKVYKGIYEK-QEVAIKVAHPNPDENILENVKQEGK--------LLWLFDHRNI 175
+G GGFGKVYKG VA+K + E Q G+ ++ + HRN+
Sbjct: 38 LGRGGFGKVYKGRLADGTLVAVKR--------LKEERTQGGELQFQTEVEMISMAVHRNL 89
Query: 176 VSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDW------AIQIAEGMNYLH 229
+ L G C+ + LV Y G + L R L DW A+ A G+ YLH
Sbjct: 90 LRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPL-DWPKRQRIALGSARGLAYLH 148
Query: 230 CQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-YKTTHMS--AAGTYA 286
+IHRD+K++N+LL +E+ + + DFGLA+ + YK TH++ GT
Sbjct: 149 DHCDPKIIHRDVKAANILL-----DEEFE---AVVGDFGLAKLMDYKDTHVTTAVRGTIG 200
Query: 287 WMAPEVIKTSIFSKASDVWSYGVVLWELLTG 317
+APE + T S+ +DV+ YGV+L EL+TG
Sbjct: 201 HIAPEYLSTGKSSEKTDVFGYGVMLLELITG 231
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 151 bits (384), Expect = 4e-42
Identities = 77/263 (29%), Positives = 116/263 (44%), Gaps = 31/263 (11%)
Query: 123 EAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIG 180
E IG+G G VY + QEVAI+ + E + E ++ + NIV+ +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK-ELIINEILVMRENKNPNIVNYLD 84
Query: 181 VCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIA-------EGMNYLHCQAP 233
L +L +VMEY GG L V+ + QIA + + +LH
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEG-------QIAAVCRECLQALEFLHSN-- 135
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTH--MSAAGTYAWMAPE 291
+IHRD+KS N+LL +K+TDFG ++ + GT WMAPE
Sbjct: 136 -QVIHRDIKSDNILLGMDGS--------VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 186
Query: 292 VIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNKL-TLPIPSTCPQLF 350
V+ + D+WS G++ E++ GE PY + N Y +A N L P +F
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIF 246
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ + C E D R S K +L+
Sbjct: 247 RDFLNRCLEMDVEKRGSAKELLQ 269
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 149 bits (378), Expect = 3e-41
Identities = 90/285 (31%), Positives = 140/285 (49%), Gaps = 37/285 (12%)
Query: 123 EAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIG 180
E IG+G FG+V+KGI + + VAIK+ E+ +E+++QE +L D + G
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 181 VCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRD 240
L+ KL ++MEY GG +L + + +I +G++YLH + IHRD
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE---KKIHRD 144
Query: 241 LKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT--HMSAAGTYAWMAPEVIKTSIF 298
+K++NVLLSE E +K+ DFG+A ++ T + GT WMAPEVIK S +
Sbjct: 145 IKAANVLLSEHGE--------VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY 196
Query: 299 SKASDVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNKLTLPIPSTCPQL-------FK 351
+D+WS G+ EL GE P+ ++ V + + N P P L K
Sbjct: 197 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN---P-----PTLEGNYSKPLK 248
Query: 352 TLMEACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQD 396
+EAC + RP+ K +LK H +FI + + +
Sbjct: 249 EFVEACLNKEPSFRPTAKELLK------H-KFILRNAKKTSYLTE 286
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 149 bits (377), Expect = 4e-41
Identities = 76/266 (28%), Positives = 125/266 (46%), Gaps = 30/266 (11%)
Query: 123 EAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIG 180
+G+G FGKVYK ++ A KV +E + E+ E ++L DH IV L+G
Sbjct: 25 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL-EDYIVEIEILATCDHPYIVKLLG 83
Query: 181 VCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAI-----QIAEGMNYLHCQAPIS 235
KL +++E+ GG ++ ++ L + I Q+ E +N+LH +
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIM---LELDRGLTEPQIQVVCRQMLEALNFLHSK---R 137
Query: 236 LIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT--HMSAAGTYAWMAPEVI 293
+IHRDLK+ NVL++ + +++ DFG++ + KT S GT WMAPEV+
Sbjct: 138 IIHRDLKAGNVLMTLEGD--------IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVV 189
Query: 294 KTSIFSKAS-----DVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNKL-TLPIPSTCP 347
D+WS G+ L E+ E P+ +N V +A + TL PS
Sbjct: 190 MCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWS 249
Query: 348 QLFKTLMEACWEADSHMRPSFKTILK 373
F+ ++ + + RPS +L+
Sbjct: 250 VEFRDFLKIALDKNPETRPSAAQLLE 275
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 149 bits (377), Expect = 6e-41
Identities = 67/263 (25%), Positives = 120/263 (45%), Gaps = 31/263 (11%)
Query: 123 EAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIG 180
IGEG G V + ++VA+K+ + E + E ++ + H N+V +
Sbjct: 51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRR-ELLFNEVVIMRDYQHFNVVEMYK 109
Query: 181 VCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIA-------EGMNYLHCQAP 233
L +L ++ME+ +GG L +++ ++ + QIA + + YLH Q
Sbjct: 110 SYLVGEELWVLMEFLQGGALTDIVSQVRLNEE-------QIATVCEAVLQALAYLHAQ-- 160
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT--HMSAAGTYAWMAPE 291
+IHRD+KS ++LL+ +K++DFG ++ K S GT WMAPE
Sbjct: 161 -GVIHRDIKSDSILLTLDGR--------VKLSDFGFCAQISKDVPKRKSLVGTPYWMAPE 211
Query: 292 VIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNKL-TLPIPSTCPQLF 350
VI S+++ D+WS G+++ E++ GE PY S + + + L +
Sbjct: 212 VISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVL 271
Query: 351 KTLMEACWEADSHMRPSFKTILK 373
+ +E D R + + +L
Sbjct: 272 RDFLERMLVRDPQERATAQELLD 294
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 155 bits (392), Expect = 8e-41
Identities = 72/359 (20%), Positives = 124/359 (34%), Gaps = 59/359 (16%)
Query: 120 IFGEAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVS 177
E +G GGFG V + I++ ++VAIK E E +++ +H N+VS
Sbjct: 17 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 76
Query: 178 LIGV------CLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAI-----QIAEGMN 226
V + L MEY GG L + L + L + I I+ +
Sbjct: 77 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALR 135
Query: 227 YLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM-SAAGTY 285
YLH +IHRDLK N++L + KI D G A+E+ + GT
Sbjct: 136 YLHEN---RIIHRDLKPENIVLQPGPQR-----LIHKIIDLGYAKELDQGELCTEFVGTL 187
Query: 286 AWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNKLTLPIP-- 343
++APE+++ ++ D WS+G + +E +TG P+ +G K I
Sbjct: 188 QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVY 247
Query: 344 -------------------STCPQ-LFKTLMEACWEADSHMRPSFKTILKALNNIVHSEF 383
S + ++ R +
Sbjct: 248 DDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP----------- 296
Query: 384 IQTPHESFHIMQDGWRVEIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQ 442
F + +++ V++ + + E E + + + E EQ
Sbjct: 297 ---NVGCFQALDSILSLKLLSVMNMVSGRVHTYPVTENENLQNLKSWLQQDTGIPEEEQ 352
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 149 bits (378), Expect = 1e-40
Identities = 55/175 (31%), Positives = 84/175 (48%), Gaps = 16/175 (9%)
Query: 214 LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV 273
L+ ++ Q+A+GM +L + IHRDL + N+LLSE +KI DFGLAR++
Sbjct: 195 LICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEK--------NVVKICDFGLARDI 243
Query: 274 YKTTHMSAAGT----YAWMAPEVIKTSIFSKASDVWSYGVVLWELLT-GEIPYKSINAYA 328
YK G WMAPE I +++ SDVWS+GV+LWE+ + G PY +
Sbjct: 244 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 303
Query: 329 VAYGVAVNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEF 383
+ P M CW + RP+F +++ L N++ +
Sbjct: 304 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 358
Score = 81.5 bits (201), Expect = 6e-17
Identities = 31/147 (21%), Positives = 61/147 (41%), Gaps = 15/147 (10%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIY-------EKQEVAIKVAHPNPDENILENVKQEGK 165
E ++L G+ +G G FG+V + + VA+K+ + + E K
Sbjct: 18 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 77
Query: 166 LLWLFD-HRNIVSLIGVCLQSPK-LCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAE 223
+L H N+V+L+G C + L +++E+ + G L+ L ++ + +
Sbjct: 78 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQ 137
Query: 224 GMNYLHCQAPISLIHRDLKSSNVLLSE 250
G +Y+ I DLK ++
Sbjct: 138 GKDYV------GAIPVDLKRRLDSITS 158
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 146 bits (371), Expect = 6e-40
Identities = 89/327 (27%), Positives = 144/327 (44%), Gaps = 56/327 (17%)
Query: 123 EAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQEGKLLW-LFDHRNIVSLI 179
E +G G +G+VYKG + K Q AIKV DE E +KQE +L HRNI +
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE--EEEIKQEINMLKKYSHHRNIATYY 87
Query: 180 G------VCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAI-----QIAEGMNYL 228
G +L LVME+ G + ++ K L + I +I G+++L
Sbjct: 88 GAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNT--LKEEWIAYICREILRGLSHL 145
Query: 229 HCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT--HMSAAGTYA 286
H +IHRD+K NVLL+E E +K+ DFG++ ++ +T + GT
Sbjct: 146 HQH---KVIHRDIKGQNVLLTENAE--------VKLVDFGVSAQLDRTVGRRNTFIGTPY 194
Query: 287 WMAPEVIKTSIFSKAS-----DVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNKLTLP 341
WMAPEVI A+ D+WS G+ E+ G P ++ + + N P
Sbjct: 195 WMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN----P 250
Query: 342 IPSTCP----QLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQDG 397
P + F++ +E+C + RP+ + ++K H FI+ +
Sbjct: 251 APRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK------H-PFIRDQPNERQV---- 299
Query: 398 WRVEIEQVLHELRVKEKELRSREEELT 424
R++++ + + K E E E +
Sbjct: 300 -RIQLKDHIDRTKKKRGEKDETEYEYS 325
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 144 bits (365), Expect = 2e-39
Identities = 63/276 (22%), Positives = 111/276 (40%), Gaps = 27/276 (9%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQEGK-LLWL 169
E+ + L +G G +G V K + Q +A+K + + + + +
Sbjct: 3 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRT 62
Query: 170 FDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA-----GRKIRPDVLVDWAIQIAEG 224
D V+ G + + + ME L++ G+ I D+L A+ I +
Sbjct: 63 VDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKA 121
Query: 225 MNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT-THMSAAG 283
+ +LH + + IHRD+K SNVL++ + +K+ DFG++ + AG
Sbjct: 122 LEHLHSKLSV--IHRDVKPSNVLINALGQ--------VKMCDFGISGYLVDDVAKDIDAG 171
Query: 284 TYAWMAPEVIKTSIFSKA----SDVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNKL- 338
+MAPE I + K SD+WS G+ + EL PY S V +
Sbjct: 172 CKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS 231
Query: 339 -TLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILK 373
LP F C + +S RP++ +++
Sbjct: 232 PQLP-ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 145 bits (368), Expect = 2e-39
Identities = 40/231 (17%), Positives = 85/231 (36%), Gaps = 37/231 (16%)
Query: 117 NKLIFGEAIGEGGFGKVYKGIYEKQEVAIKV----------------AHPNPDENILENV 160
N + +G F K+ + + A+K ++ ++
Sbjct: 31 NDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDF 90
Query: 161 KQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL---------NRVLAGRKIRP 211
K E +++ + ++ G+ ++ ++ EY + I
Sbjct: 91 KNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPI 150
Query: 212 DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR 271
V+ + +Y+H + I HRD+K SN+L+ + +K++DFG +
Sbjct: 151 QVIKCIIKSVLNSFSYIHNEKNI--CHRDVKPSNILMDK--------NGRVKLSDFGESE 200
Query: 272 EVYKTTHMSAAGTYAWMAPEVI--KTSIFSKASDVWSYGVVLWELLTGEIP 320
+ + GTY +M PE ++S D+WS G+ L+ + +P
Sbjct: 201 YMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 147 bits (373), Expect = 2e-39
Identities = 63/302 (20%), Positives = 117/302 (38%), Gaps = 30/302 (9%)
Query: 108 DVKLVEIDYNKLIFGEAIGEGGFGK-VYKGIYEKQEVAIKVAHPNPDENILENVKQEGKL 166
+ +V + + +G G G VY+G+++ ++VA+K P +E +L
Sbjct: 15 ETSVVIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPE----CFSFADREVQL 70
Query: 167 L-WLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAI-QIAEG 224
L +H N++ + +E V + + Q G
Sbjct: 71 LRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSG 130
Query: 225 MNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK-----TTHM 279
+ +LH +++HRDLK N+L+S P + ++ I+DFGL +++ +
Sbjct: 131 LAHLHSL---NIVHRDLKPHNILISMPNAHGKIK---AMISDFGLCKKLAVGRHSFSRRS 184
Query: 280 SAAGTYAWMAPEVIKTSIF---SKASDVWSYGVVLWELLT-GEIPYKSINAYAVAYGVAV 335
GT W+APE++ + D++S G V + +++ G P+ +
Sbjct: 185 GVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGA 244
Query: 336 NKLTLPIP-STCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIM 394
L P + + L+E D RPS K +LK H F + +
Sbjct: 245 CSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK------HP-FFWSLEKQLQFF 297
Query: 395 QD 396
QD
Sbjct: 298 QD 299
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 144 bits (366), Expect = 2e-39
Identities = 65/273 (23%), Positives = 114/273 (41%), Gaps = 22/273 (8%)
Query: 113 EIDYNKLIFGEAIGEGGFGKVYKGIYE--KQEVAIKVAHPNPDENILENVKQEGK-LLWL 169
+ + N L +G G G+V+K + +A+K + ++ + + + +L
Sbjct: 21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKS 80
Query: 170 FDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA-GRKIRPDVLVDWAIQIAEGMNYL 228
D IV G + + + + ME I +L + I + + YL
Sbjct: 81 HDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYL 140
Query: 229 HCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT-THMSAAGTYAW 287
+ + IHRD+K SN+LL E + +K+ DFG++ + +AG A+
Sbjct: 141 KEKHGV--IHRDVKPSNILLDERGQ--------IKLCDFGISGRLVDDKAKDRSAGCAAY 190
Query: 288 MAPEVIKTSIFSKA-----SDVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNK--LTL 340
MAPE I +K +DVWS G+ L EL TG+ PYK+ + + L
Sbjct: 191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLL 250
Query: 341 PIPSTCPQLFKTLMEACWEADSHMRPSFKTILK 373
P F++ ++ C D RP + +L+
Sbjct: 251 PGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 144 bits (365), Expect = 3e-39
Identities = 82/309 (26%), Positives = 145/309 (46%), Gaps = 40/309 (12%)
Query: 123 EAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIG 180
E +GEG +G VYK I+++ Q VAIK D L+ + +E ++ D ++V G
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD---LQEIIKEISIMQQCDSPHVVKYYG 91
Query: 181 VCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAI-----QIAEGMNYLHCQAPIS 235
++ L +VMEY G ++ ++ ++R L + I +G+ YLH
Sbjct: 92 SYFKNTDLWIVMEYCGAGSVSDII---RLRNKTLTEDEIATILQSTLKGLEYLHFM---R 145
Query: 236 LIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTH--MSAAGTYAWMAPEVI 293
IHRD+K+ N+LL+ K+ DFG+A ++ T + GT WMAPEVI
Sbjct: 146 KIHRDIKAGNILLNTEGH--------AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI 197
Query: 294 KTSIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNKL-TLPIPSTCPQLFKT 352
+ ++ +D+WS G+ E+ G+ PY I+ + + N T P F
Sbjct: 198 QEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTD 257
Query: 353 LMEACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQDGWRVEIEQVLHELRVK 412
++ C R + +L+ H F+++ + I++D I + + ++++K
Sbjct: 258 FVKQCLVKSPEQRATATQLLQ------H-PFVRSA-KGVSILRD----LINEAM-DVKLK 304
Query: 413 EKELRSREE 421
+E + REE
Sbjct: 305 RQESQQREE 313
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 142 bits (361), Expect = 4e-39
Identities = 62/258 (24%), Positives = 116/258 (44%), Gaps = 18/258 (6%)
Query: 121 FGEAIGEGGFGKVY--KGIYEKQEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIV 176
G +G+G FG VY + K +A+KV + +++E ++ H NI+
Sbjct: 13 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 72
Query: 177 SLIGVCLQSPKLCLVMEYARGGPLNRVLA-GRKIRPDVLVDWAIQIAEGMNYLHCQAPIS 235
L G + ++ L++EYA G + R L K + ++A ++Y H +
Sbjct: 73 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---R 129
Query: 236 LIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKT 295
+IHRD+K N+LL LKI DFG + + GT ++ PE+I+
Sbjct: 130 VIHRDIKPENLLLGS--------AGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEG 181
Query: 296 SIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNKLTLPIPSTCPQLFKTLME 355
+ + D+WS GV+ +E L G+ P+++ Y ++++ P + + L+
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YK-RISRVEFTFPDFVTEGARDLIS 239
Query: 356 ACWEADSHMRPSFKTILK 373
+ + RP + +L+
Sbjct: 240 RLLKHNPSQRPMLREVLE 257
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 142 bits (361), Expect = 1e-38
Identities = 70/287 (24%), Positives = 114/287 (39%), Gaps = 31/287 (10%)
Query: 106 INDVKLVEIDYNKLIFGEAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQE 163
I+ + + L IG G +G V K +++ Q +A+K DE + + +
Sbjct: 11 ISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMD 70
Query: 164 GK-LLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL------AGRKIRPDVLVD 216
++ D IV G + + ME ++ I ++L
Sbjct: 71 LDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTS-FDKFYKYVYSVLDDVIPEEILGK 129
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
+ + +N+L I IHRD+K SN+LL +K+ DFG++ ++ +
Sbjct: 130 ITLATVKALNHLKENLKI--IHRDIKPSNILLDRSGN--------IKLCDFGISGQLVDS 179
Query: 277 THMS-AAGTYAWMAPEVIKTSIFSKA----SDVWSYGVVLWELLTGEIPYKSINA----- 326
+ AG +MAPE I S + SDVWS G+ L+EL TG PY N+
Sbjct: 180 IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQL 239
Query: 327 YAVAYGVAVNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILK 373
V G +L+ F + C D RP +K +LK
Sbjct: 240 TQVVKG-DPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 142 bits (360), Expect = 3e-38
Identities = 65/300 (21%), Positives = 121/300 (40%), Gaps = 27/300 (9%)
Query: 89 PANFVSSIEDINLVSSVINDVKLVEIDYNKLIFGEAIGEGGFGKVYKGIYEK--QEVAIK 146
P + D++ + + + E+ + L +G G +G V K + Q +A+K
Sbjct: 23 PQTSSTPPRDLDSKACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVK 82
Query: 147 VAHPNPDENILENVKQEGK-LLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA 205
+ + + + + D V+ G + + + ME L++
Sbjct: 83 RIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYK 141
Query: 206 -----GRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
G+ I D+L A+ I + + +LH + + IHRD+K SNVL++ +
Sbjct: 142 QVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV--IHRDVKPSNVLINALGQ------- 192
Query: 261 TLKITDFGLAREVYKTTHMS-AAGTYAWMAPEVIKTSIFSKA----SDVWSYGVVLWELL 315
+K+ DFG++ + + + AG +MAPE I + K SD+WS G+ + EL
Sbjct: 193 -VKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELA 251
Query: 316 TGEIPYKSINAYAVAYGVAVNKL--TLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILK 373
PY S V + LP F C + +S RP++ +++
Sbjct: 252 ILRFPYDSWGTPFQQLKQVVEEPSPQLP-ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 140 bits (355), Expect = 5e-38
Identities = 67/239 (28%), Positives = 101/239 (42%), Gaps = 47/239 (19%)
Query: 117 NKLIFGEAIGEGGFGKVYKGIYEK--QEVAIKV-------------------------AH 149
N+ + IG+G +G V E A+KV
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 150 PNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSP---KLCLVMEYARGGPLNRVLAG 206
+E V QE +L DH N+V L+ V L P L +V E GP+ V
Sbjct: 73 CIQPRGPIEQVYQEIAILKKLDHPNVVKLVEV-LDDPNEDHLYMVFELVNQGPVMEVPTL 131
Query: 207 RKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITD 266
+ + D + + +G+ YLH Q +IHRD+K SN+L+ E +KI D
Sbjct: 132 KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGE--------DGHIKIAD 180
Query: 267 FGLAREVYKTTHM--SAAGTYAWMAPEVIKTSIFS---KASDVWSYGVVLWELLTGEIP 320
FG++ E + + + GT A+MAPE + + KA DVW+ GV L+ + G+ P
Sbjct: 181 FGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 140 bits (355), Expect = 6e-38
Identities = 74/289 (25%), Positives = 118/289 (40%), Gaps = 47/289 (16%)
Query: 115 DYNKLIFGEAIGEGGFGKVYKGIYE--KQEVAIKVAHPNPDENILENVKQEGKLLWLFDH 172
DY E IG G V K++VAIK + + ++ + +E + + H
Sbjct: 16 DYELQ---EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHH 72
Query: 173 RNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAI----QIA------ 222
NIVS + +L LVM+ GG + ++ + I + IA
Sbjct: 73 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDII--KHIVAKGEHKSGVLDESTIATILREV 130
Query: 223 -EGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA 281
EG+ YLH IHRD+K+ N+LL E +++I DFG++ + ++
Sbjct: 131 LEGLEYLHKN---GQIHRDVKAGNILLGED--------GSVQIADFGVSAFLATGGDITR 179
Query: 282 -------AGTYAWMAPEVIKTSIF--SKASDVWSYGVVLWELLTGEIPYKSINAYAVAYG 332
GT WMAPEV++ KA D+WS+G+ EL TG PY V
Sbjct: 180 NKVRKTFVGTPCWMAPEVMEQVRGYDFKA-DIWSFGITAIELATGAAPYHKYPPMKVLML 238
Query: 333 VAVN---KLTLPIPSTCP-----QLFKTLMEACWEADSHMRPSFKTILK 373
N L + + F+ ++ C + D RP+ +L+
Sbjct: 239 TLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 142 bits (361), Expect = 8e-38
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 25/216 (11%)
Query: 120 IFGEAIGEGGFGKVYKGIYEK---QEVAIKV-------AHPNPDENILENVKQEGKLLWL 169
I + +G G G+V E+ ++VAI++ + + NV+ E ++L
Sbjct: 138 IMSKTLGSGACGEVKLAF-ERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 196
Query: 170 FDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYL 228
+H I+ + + +V+E GG L ++V+ ++++ + Q+ + YL
Sbjct: 197 LNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 255
Query: 229 HCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS-AAGTYAW 287
H +IHRDLK NVLLS E+ +KITDFG ++ + +T+ M GT +
Sbjct: 256 HEN---GIIHRDLKPENVLLSSQEED-----CLIKITDFGHSKILGETSLMRTLCGTPTY 307
Query: 288 MAPEVIKTSIF---SKASDVWSYGVVLWELLTGEIP 320
+APEV+ + ++A D WS GV+L+ L+G P
Sbjct: 308 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 140 bits (354), Expect = 2e-37
Identities = 83/330 (25%), Positives = 132/330 (40%), Gaps = 65/330 (19%)
Query: 123 EAIGEGGFGKVYKGIYEK--QEVAIKV--AHPNPDENILENVKQEGKLLWLFDHRNIVSL 178
IG G FG VY + + VAIK +++ +E + L H N +
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 179 IGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAI-----QIAEGMNYLHCQAP 233
G L+ LVMEY G + + ++ L + I +G+ YLH
Sbjct: 120 RGCYLREHTAWLVMEYCLGSASDLL----EVHKKPLQEVEIAAVTHGALQGLAYLHSH-- 173
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVI 293
++IHRD+K+ N+LLSEP +K+ DFG A + GT WMAPEVI
Sbjct: 174 -NMIHRDVKAGNILLSEPGL--------VKLGDFGSASIMAPANSF--VGTPYWMAPEVI 222
Query: 294 ---KTSIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNKLTLPIPSTCPQL- 349
+ DVWS G+ EL + P ++NA + Y +A N+ P L
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE--------SPALQ 274
Query: 350 -------FKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQDGWRVEI 402
F+ +++C + RP+ + +LK H F+
Sbjct: 275 SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK------H-RFVLRERPP------------ 315
Query: 403 EQVLHELRVKEKELRSREEELTKAQMQQKL 432
V+ +L + K+ + L +M++ L
Sbjct: 316 -TVIMDLIQRTKDAVRELDNLQYRKMKKIL 344
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 137 bits (348), Expect = 4e-37
Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 20/259 (7%)
Query: 122 GEAIGEGGFGKVYKG--IYEKQEVAIKVAHPN--PDENILENVKQEGKLLWLFDHRNIVS 177
G +G+GGF K ++ K+ A K+ + + E + E + H+++V
Sbjct: 20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 79
Query: 178 LIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVDWAIQIAEGMNYLHCQAPISL 236
G + + +V+E R L + RK + + QI G YLH +
Sbjct: 80 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 136
Query: 237 IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT--HMSAAGTYAWMAPEVIK 294
IHRDLK N+ L NEDL+ +KI DFGLA +V GT ++APEV+
Sbjct: 137 IHRDLKLGNLFL-----NEDLE---VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS 188
Query: 295 TSIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNKLTLPIPSTCPQLFKTLM 354
S DVWS G +++ LL G+ P+++ Y + K IP + +L+
Sbjct: 189 KKGHSFEVDVWSIGCIMYTLLVGKPPFETSC-LKETYL-RIKKNEYSIPKHINPVAASLI 246
Query: 355 EACWEADSHMRPSFKTILK 373
+ + D RP+ +L
Sbjct: 247 QKMLQTDPTARPTINELLN 265
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 144 bits (365), Expect = 4e-37
Identities = 51/232 (21%), Positives = 85/232 (36%), Gaps = 35/232 (15%)
Query: 122 GEAIGEGGFGKVYKG---IYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSL 178
I GG G +Y + V +K + D E + L H +IV +
Sbjct: 85 KGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQI 144
Query: 179 I-----GVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAP 233
P +VMEY G L R + + + + ++I ++YLH
Sbjct: 145 FNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK-LPVAEAIAYLLEILPALSYLHSI-- 201
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAA-GTYAWMAPEV 292
L++ DLK N++L+E + LK+ D G + GT + APE+
Sbjct: 202 -GLVYNDLKPENIMLTE---------EQLKLIDLGAVSRI---NSFGYLYGTPGFQAPEI 248
Query: 293 IKTSIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNKLTLPIPS 344
++T + A+D+++ G L L G V+ L P
Sbjct: 249 VRTGP-TVATDIYTVGRTLAALTLDLPTRN---------GRYVDGLPEDDPV 290
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 137 bits (348), Expect = 5e-37
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 19/218 (8%)
Query: 122 GEAIGEGGFGKVYKG--IYEKQEVAIKVAHPN--PDENILENVKQEGKLLWLFDHRNIVS 177
+ +G GG VY +VAIK E L+ ++E H+NIVS
Sbjct: 16 VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 178 LIGVCLQSPKLCLVMEYARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISL 236
+I V + LVMEY G L+ + + D +++ QI +G+ + H +
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM---RI 132
Query: 237 IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAA---GTYAWMAPEVI 293
+HRD+K N+L+ KTLKI DFG+A+ + +T+ GT + +PE
Sbjct: 133 VHRDIKPQNILIDSN--------KTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQA 184
Query: 294 KTSIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAY 331
K + +D++S G+VL+E+L GE P+ A ++A
Sbjct: 185 KGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAI 222
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 137 bits (348), Expect = 1e-36
Identities = 72/268 (26%), Positives = 111/268 (41%), Gaps = 38/268 (14%)
Query: 122 GEAIGEGGFGKVYKG--IYEKQEVAIKVAHPN--PDENILENVKQEGKLLWLFDHRNIVS 177
G +G+GGF K ++ K+ A K+ + + E + E + H+++V
Sbjct: 46 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 105
Query: 178 LIGVCLQSPKLCLVMEYARGGPLNRVLAGRK-IRPDVLVDWAIQIAEGMNYLHCQAPISL 236
G + + +V+E R L + RK + + QI G YLH +
Sbjct: 106 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 162
Query: 237 IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTT--HMSAAGTYAWMAPEVIK 294
IHRDLK N+ L NEDL+ +KI DFGLA +V GT ++APEV+
Sbjct: 163 IHRDLKLGNLFL-----NEDLE---VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS 214
Query: 295 TSIFSKASDVWSYGVVLWELLTGEIP---------YKSINAYAVAYGVAVNKLTLPIPST 345
S DVWS G +++ LL G+ P Y I K IP
Sbjct: 215 KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI-----------KKNEYSIPKH 263
Query: 346 CPQLFKTLMEACWEADSHMRPSFKTILK 373
+ +L++ + D RP+ +L
Sbjct: 264 INPVAASLIQKMLQTDPTARPTINELLN 291
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 138 bits (349), Expect = 1e-36
Identities = 41/254 (16%), Positives = 84/254 (33%), Gaps = 24/254 (9%)
Query: 88 FPANFVSSIEDINLVSSVINDVKLVEIDYNKLIFGEAIGEGGFGKVYKGIY-------EK 140
P + + + I ++ + +GEG F +VY+ K
Sbjct: 36 KPVSSYPNTFEWQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNK 95
Query: 141 QEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL 200
Q+ +KV P + Q + L + L LV E G L
Sbjct: 96 QKFVLKVQKP-ANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTL 154
Query: 201 NRVLAGRKIRPDVLVD------WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIEN 254
+ K P+ ++ +A+++ + +H +IH D+K N +L
Sbjct: 155 LNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLE 211
Query: 255 EDLQF---KTLKITDFGLAREV----YKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSY 307
+D + L + D G + ++ T + T + E++ ++ D +
Sbjct: 212 QDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGV 271
Query: 308 GVVLWELLTGEIPY 321
++ +L G
Sbjct: 272 AATVYCMLFGTYMK 285
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 136 bits (345), Expect = 2e-36
Identities = 61/213 (28%), Positives = 107/213 (50%), Gaps = 25/213 (11%)
Query: 120 IFGEAIGEGGFGKVYKGIYEK---QEVAIKV-------AHPNPDENILENVKQEGKLLWL 169
I + +G G G+V E+ ++VAIK+ + + NV+ E ++L
Sbjct: 13 IMSKTLGSGACGEVKLAF-ERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 170 FDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYL 228
+H I+ + + +V+E GG L ++V+ ++++ + Q+ + YL
Sbjct: 72 LNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 130
Query: 229 HCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS-AAGTYAW 287
H +IHRDLK NVLLS E+ +KITDFG ++ + +T+ M GT +
Sbjct: 131 HEN---GIIHRDLKPENVLLSSQEED-----CLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 288 MAPEVIKTSI---FSKASDVWSYGVVLWELLTG 317
+APEV+ + +++A D WS GV+L+ L+G
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 137 bits (347), Expect = 8e-36
Identities = 70/334 (20%), Positives = 135/334 (40%), Gaps = 47/334 (14%)
Query: 104 SVINDVKLVEIDYNKL-IFGEAIGEGGFGKV-YKGIYEKQEVAIKVAHPNPDENILENVK 161
S I ++ E L + + +G G G V ++G ++ + VA+K + +
Sbjct: 1 SRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID----FCDIAL 56
Query: 162 QEGKLLW-LFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAI- 219
E KLL DH N++ L + +E + V + ++ +
Sbjct: 57 MEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYN 116
Query: 220 ------QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKT-----LKITDFG 268
QIA G+ +LH +IHRDLK N+L+S Q + I+DFG
Sbjct: 117 PISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 269 LAREV------YKTTHMSAAGTYAWMAPEVIKTSIF-------SKASDVWSYGVVLWELL 315
L +++ ++T + +GT W APE+++ S +++ D++S G V + +L
Sbjct: 174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
Query: 316 T-GEIPY--KSINAYAVAYGV-AVNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTI 371
+ G+ P+ K + G+ +++++ + L+ + D RP+ +
Sbjct: 234 SKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 293
Query: 372 LKALNNIVHSEFIQTPHESFHIMQD-GWRVEIEQ 404
L+ H + + R+EIE
Sbjct: 294 LR------H-PLFWPKSKKLEFLLKVSDRLEIEN 320
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 133 bits (338), Expect = 9e-36
Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 16/209 (7%)
Query: 122 GEAIGEGGFGKVY--KGIYEKQEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIVS 177
G +G+G FG VY + K +A+KV + E + +++E ++ H NI+
Sbjct: 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILR 78
Query: 178 LIGVCLQSPKLCLVMEYARGGPLNRVLA-GRKIRPDVLVDWAIQIAEGMNYLHCQAPISL 236
+ ++ L++E+A G L + L + + ++A+ ++Y H + +
Sbjct: 79 MYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER---KV 135
Query: 237 IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTS 296
IHRD+K N+L+ +L KI DFG + + GT ++ PE+I+
Sbjct: 136 IHRDIKPENLLMGY---KGEL-----KIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGK 187
Query: 297 IFSKASDVWSYGVVLWELLTGEIPYKSIN 325
+ D+W GV+ +E L G P+ S +
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGMPPFDSPS 216
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 133 bits (337), Expect = 2e-35
Identities = 58/224 (25%), Positives = 106/224 (47%), Gaps = 25/224 (11%)
Query: 122 GEAIGEGGFGKVYKG--IYEKQEVAIKVAHPN--PDENILENVKQEGKLLWLFDHRNIVS 177
GE +G GG +V+ + + ++VA+KV + D + ++E + +H IV+
Sbjct: 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVA 76
Query: 178 L--IGVCLQSPKLC--LVMEYARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQA 232
+ G +VMEY G L ++ + P ++ + +N+ H
Sbjct: 77 VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN- 135
Query: 233 PISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM-----SAAGTYAW 287
+IHRD+K +N+++S +K+ DFG+AR + + + + GT +
Sbjct: 136 --GIIHRDVKPANIMISAT--------NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 288 MAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAY 331
++PE + SDV+S G VL+E+LTGE P+ + +VAY
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 132 bits (334), Expect = 4e-35
Identities = 64/218 (29%), Positives = 96/218 (44%), Gaps = 31/218 (14%)
Query: 122 GEAIGEGGFGKVYKG--IYEKQEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIVS 177
G +G+G F VY+ I+ EVAIK+ +++ V+ E K+ H +I+
Sbjct: 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILE 75
Query: 178 LIGVCLQSPKLCLVMEYARGGPLNRVLA--GRKIRPDVLVDWAIQIAEGMNYLHCQAPIS 235
L S + LV+E G +NR L + + + QI GM YLH
Sbjct: 76 LYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---G 132
Query: 236 LIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAA--------GTYAW 287
++HRDL SN+LL+ +KI DFGLA T + GT +
Sbjct: 133 ILHRDLTLSNLLLTR--------NMNIKIADFGLA------TQLKMPHEKHYTLCGTPNY 178
Query: 288 MAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSIN 325
++PE+ S SDVWS G + + LL G P+ +
Sbjct: 179 ISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDT 216
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 131 bits (332), Expect = 6e-35
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 19/205 (9%)
Query: 121 FGEAIGEGGFGKVYKGIYEK---QEVAIKV---AHPNPDENILENVKQEGKLLWLFDHRN 174
E +G+G F V + + K E A K+ + + + +++E ++ H N
Sbjct: 10 VKEELGKGAFSVVRRCV-HKTTGLEFAAKIINTKKLSARD--FQKLEREARICRKLQHPN 66
Query: 175 IVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAP 233
IV L + LV + GG L ++A QI E + Y H
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN-- 124
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS-AAGTYAWMAPEV 292
++HR+LK N+LL+ + + K+ DFGLA EV + AGT +++PEV
Sbjct: 125 -GIVHRNLKPENLLLASKAKGAAV-----KLADFGLAIEVNDSEAWHGFAGTPGYLSPEV 178
Query: 293 IKTSIFSKASDVWSYGVVLWELLTG 317
+K +SK D+W+ GV+L+ LL G
Sbjct: 179 LKKDPYSKPVDIWACGVILYILLVG 203
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 132 bits (333), Expect = 1e-34
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 36/218 (16%)
Query: 115 DYNKLIFGEAIGEGGFGKVYKGI--YEKQEVAIKVAHPNPDENILENVKQEGKLLWLFD- 171
Y+ + + +GEG F K + Q A+K+ + + N ++E L L +
Sbjct: 9 HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKII----SKRMEANTQKEITALKLCEG 64
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVL---------AGRKIRPDVLVDWAIQI 221
H NIV L V LVME GG L R+ A +R ++
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMR---------KL 115
Query: 222 AEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTH--M 279
++++H ++HRDLK N+L ++ +N ++ KI DFG AR
Sbjct: 116 VSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEI-----KIIDFGFARLKPPDNQPLK 167
Query: 280 SAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTG 317
+ T + APE++ + + ++ D+WS GV+L+ +L+G
Sbjct: 168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSG 205
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 130 bits (328), Expect = 2e-34
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 19/209 (9%)
Query: 120 IFGEAIGEGGFGKVYKGIYE--KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVS 177
+ +GEG +G+V + ++ VA+K+ + EN+K+E + + +H N+V
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 178 LIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISL 236
G + L +EY GG L +R+ + + Q+ G+ YLH +
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GI 126
Query: 237 IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM----SAAGTYAWMAPEV 292
HRD+K N+LL E LKI+DFGLA GT ++APE+
Sbjct: 127 THRDIKPENLLLDE--------RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 293 IKTSIFS-KASDVWSYGVVLWELLTGEIP 320
+K F + DVWS G+VL +L GE+P
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 130 bits (329), Expect = 3e-34
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 28/218 (12%)
Query: 120 IFGEAIGEGGFGKVYKGIYEK--QEVAIKV---AHPNPDENILENVKQEGKLLWLFDHRN 174
+ G+ +GEG +GKV + + + A+K+ N NVK+E +LL H+N
Sbjct: 8 LMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKN 67
Query: 175 IVSLIGVCLQ--SPKLCLVMEYARGGP---LNRVLAGRKIRPDVLVDWAIQIAEGMNYLH 229
++ L+ V K+ +VMEY G L+ V R + Q+ +G+ YLH
Sbjct: 68 VIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKR-FPVCQAHGYFCQLIDGLEYLH 126
Query: 230 CQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR--EVYKTTHM--SAAGTY 285
Q ++H+D+K N+LL+ TLKI+ G+A + ++ G+
Sbjct: 127 SQ---GIVHKDIKPGNLLLTT--------GGTLKISALGVAEALHPFAADDTCRTSQGSP 175
Query: 286 AWMAPEVIKTS-IFS-KASDVWSYGVVLWELLTGEIPY 321
A+ PE+ FS D+WS GV L+ + TG P+
Sbjct: 176 AFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPF 213
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 130 bits (330), Expect = 3e-34
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 18/210 (8%)
Query: 121 FGEAIGEGGFGKVYKGIYEK---QEVAIKV-----AHPNPDENILENVKQEGKLLWLFDH 172
GE +G G F V K EK E A K + + E +++E +L H
Sbjct: 16 IGEELGSGQFAIVKKCR-EKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 173 RNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQ 231
N+++L V + L++E GG L + + + + + QI +G+NYLH +
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 232 APISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS-AAGTYAWMAP 290
+ H DLK N++L + +K+ DFGLA E+ GT ++AP
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPI----PHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIP 320
E++ +D+WS GV+ + LL+G P
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASP 217
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 131 bits (332), Expect = 3e-34
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 18/210 (8%)
Query: 121 FGEAIGEGGFGKVYKGIYEK---QEVAIKV-----AHPNPDENILENVKQEGKLLWLFDH 172
GE +G G F V K EK E A K + + E +++E +L H
Sbjct: 16 IGEELGSGQFAIVKKCR-EKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLH 74
Query: 173 RNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQ 231
NI++L V + L++E GG L + + + + + QI +G+NYLH +
Sbjct: 75 PNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 232 APISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS-AAGTYAWMAP 290
+ H DLK N++L ++++ +K+ DFGLA E+ GT ++AP
Sbjct: 135 ---KIAHFDLKPENIMLL----DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIP 320
E++ +D+WS GV+ + LL+G P
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASP 217
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 130 bits (328), Expect = 1e-33
Identities = 47/319 (14%), Positives = 83/319 (26%), Gaps = 66/319 (20%)
Query: 118 KLIFGEAIGEGGFGKVYKGI--YEKQEVAIKVAHPN--PDENILENVKQEGKLLWLFDHR 173
KL E + G V+ ++ A+KV + LE + +
Sbjct: 63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGE 122
Query: 174 NIVSLIGVC--------------------------LQSPKLCLVMEYARG--GPLNRVLA 205
+ L+M A L L
Sbjct: 123 SPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLD 182
Query: 206 GRKIRPDVLVDWA-----IQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
+ A Q+ L + L+H N+ + D +
Sbjct: 183 FVYVFRGDEGILALHILTAQLIRLAANLQSK---GLVHGHFTPDNLFIMP-----DGR-- 232
Query: 261 TLKITDFGLAREVYKTTHMSAAGTYAWMAPEVI---KTSIFSKASDVWSYGVVLWELLTG 317
L + D +V T A+ AP T+ F+ A + W G+ ++ +
Sbjct: 233 -LMLGDVSALWKV--GTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCL 289
Query: 318 EIPY-------KSINAYAVAYGVAVNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFKT 370
+P+ K + L + P KTL+ D R
Sbjct: 290 FLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLE 349
Query: 371 ILKALNNIVHSEFIQTPHE 389
++ EF+Q +E
Sbjct: 350 AME------TPEFLQLQNE 362
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 128 bits (323), Expect = 1e-33
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 20/209 (9%)
Query: 120 IFGEAIGEGGFGKVYKGIYEK---QEVAIKV---AHPNPDENILENVKQEGKLLWLFDHR 173
+G+G FG+V K ++ QE A+KV A + + +E +LL DH
Sbjct: 25 NIVCMLGKGSFGEVLKCK-DRITQQEYAVKVINKASAKNKD--TSTILREVELLKKLDHP 81
Query: 174 NIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQA 232
NI+ L + S +V E GG L + ++ ++ Q+ G+ Y+H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH- 140
Query: 233 PISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS-AAGTYAWMAPE 291
+++HRDLK N+LL ++ +KI DFGL+ + T M GT ++APE
Sbjct: 141 --NIVHRDLKPENILLESKEKD-----CDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPE 193
Query: 292 VIKTSIFSKASDVWSYGVVLWELLTGEIP 320
V++ + + + DVWS GV+L+ LL+G P
Sbjct: 194 VLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 129 bits (327), Expect = 1e-33
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 44/216 (20%)
Query: 121 FGEAIGEGGFGKVYKGIYEK---QEVAIKVAHPNPDENIL---ENVKQEGKLLW-LFDHR 173
E IG G + + I K E A+K+ I + +E ++L H
Sbjct: 26 VKEDIGVGSYSVCKRCI-HKATNMEFAVKI--------IDKSKRDPTEEIEILLRYGQHP 76
Query: 174 NIVSLIGVCLQSPKLCLVMEYARGGPL-NRVL---------AGRKIRPDVLVDWAIQIAE 223
NI++L V + +V E +GG L +++L A + I +
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLF---------TITK 127
Query: 224 GMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTH--MSA 281
+ YLH Q ++HRDLK SN+L + N + +++I DFG A+++ M+
Sbjct: 128 TVEYLHAQ---GVVHRDLKPSNILYVDESGNPE----SIRICDFGFAKQLRAENGLLMTP 180
Query: 282 AGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTG 317
T ++APEV++ + A D+WS GV+L+ +LTG
Sbjct: 181 CYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 128 bits (324), Expect = 1e-33
Identities = 51/219 (23%), Positives = 87/219 (39%), Gaps = 20/219 (9%)
Query: 122 GEAIGEGGFGKVYKGIYEK--QEVAIKVAHPN--PDENILENVKQEGKLLWLFDHRNIVS 177
+G GG G VY+ + VA+K+ D +++E + ++V
Sbjct: 39 RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVP 98
Query: 178 LIGVCLQSPKLCLVMEYARGGPLNRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPISL 236
+ +L + M G L +L + + P V QI ++ H
Sbjct: 99 IHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAG---A 155
Query: 237 IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR---EVYKTTHMSAAGTYAWMAPEVI 293
HRD+K N+L+S + DFG+A + T + GT +MAPE
Sbjct: 156 THRDVKPENILVSAD--------DFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERF 207
Query: 294 KTSIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYG 332
S + +D+++ VL+E LTG PY+ + +V
Sbjct: 208 SESHATYRADIYALTCVLYECLTGSPPYQG-DQLSVMGA 245
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 130 bits (328), Expect = 1e-33
Identities = 46/248 (18%), Positives = 97/248 (39%), Gaps = 37/248 (14%)
Query: 100 NLVSSVINDVKLVEIDYNKLIFGEAIGEG--GFGKVYKGIYEK--QEVAIKVAHP-NPDE 154
NL ++ Y L IG+G V Y+ + V ++ +
Sbjct: 11 NLYFQGMSSFLPEGGCYELL---TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSN 67
Query: 155 NILENVKQEGKLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVL 214
++ ++ E + LF+H NIV + +L +V + G ++ D +
Sbjct: 68 EMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLI--CTHFMDGM 125
Query: 215 VDWAI-----QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGL 269
+ AI + + ++Y+H +HR +K+S++L+S + ++
Sbjct: 126 NELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVD--------GKVYLSGLRS 174
Query: 270 A---------REVYKTTHMSAAGTYAWMAPEVIKTSI--FSKASDVWSYGVVLWELLTGE 318
+ V + W++PEV++ ++ + SD++S G+ EL G
Sbjct: 175 NLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGH 234
Query: 319 IPYKSINA 326
+P+K + A
Sbjct: 235 VPFKDMPA 242
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 129 bits (327), Expect = 2e-33
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 19/205 (9%)
Query: 121 FGEAIGEGGFGKVYKGIYEK---QEVAIKV---AHPNPDENILENVKQEGKLLWLFDHRN 174
E +G+G F V + + K E A K+ + + + +++E ++ H N
Sbjct: 33 VKEELGKGAFSVVRRCV-HKTTGLEFAAKIINTKKLSARD--FQKLEREARICRKLQHPN 89
Query: 175 IVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAP 233
IV L + LV + GG L ++A QI E + Y H
Sbjct: 90 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN-- 147
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS-AAGTYAWMAPEV 292
++HR+LK N+LL+ + + K+ DFGLA EV + AGT +++PEV
Sbjct: 148 -GIVHRNLKPENLLLASKAKGAAV-----KLADFGLAIEVNDSEAWHGFAGTPGYLSPEV 201
Query: 293 IKTSIFSKASDVWSYGVVLWELLTG 317
+K +SK D+W+ GV+L+ LL G
Sbjct: 202 LKKDPYSKPVDIWACGVILYILLVG 226
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 128 bits (324), Expect = 2e-33
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 120 IFGEAIGEGGFGKVYKGIYE--KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVS 177
+ +GEG +G+V + ++ VA+K+ + EN+K+E + + +H N+V
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 178 LIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISL 236
G + L +EY GG L +R+ + + Q+ G+ YLH +
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GI 126
Query: 237 IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA--------REVYKTTHMSAAGTYAWM 288
HRD+K N+LL E LKI+DFGLA + GT ++
Sbjct: 127 THRDIKPENLLLDE--------RDNLKISDFGLATVFRYNNRERLLNKM----CGTLPYV 174
Query: 289 APEVIKTSIFS-KASDVWSYGVVLWELLTGEIP 320
APE++K F + DVWS G+VL +L GE+P
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 128 bits (324), Expect = 2e-33
Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 120 IFGEAIGEGGFGKVYKGIYE--KQEVAIKVAH-PNPDENILENVKQEGKLLWLFDHRNIV 176
+ IG+G F KV + +EVAIK+ + L+ + +E +++ + +H NIV
Sbjct: 18 RLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIV 77
Query: 177 SLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPIS 235
L V L L+MEYA GG + + ++A +++ QI + Y H +
Sbjct: 78 KLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---R 134
Query: 236 LIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAA-GTYAWMAPEVIK 294
++HRDLK+ N+LL +KI DFG + E + A G + APE+ +
Sbjct: 135 IVHRDLKAENLLLDAD--------MNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQ 186
Query: 295 TSIFS-KASDVWSYGVVLWELLTGEIPYKSIN 325
+ DVWS GV+L+ L++G +P+ N
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 127 bits (322), Expect = 2e-33
Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 32/211 (15%)
Query: 120 IFGEAIGEGGFGKVYKGIYEK---QEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIV 176
IF E +G G F +V+ ++ + A+K +P +++ E +L H NIV
Sbjct: 12 IFMEVLGSGAFSEVFLVK-QRLTGKLFALKCIKKSPAFRD-SSLENEIAVLKKIKHENIV 69
Query: 177 SLIGVCLQSPKLCLVMEYARGGPL-NRVL---------AGRKIRPDVLVDWAIQIAEGMN 226
+L + + LVM+ GG L +R+L A I+ Q+ +
Sbjct: 70 TLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQ---------QVLSAVK 120
Query: 227 YLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYA 286
YLH ++HRDLK N+L P EN + ITDFGL++ +A GT
Sbjct: 121 YLHEN---GIVHRDLKPENLLYLTPEENSKI-----MITDFGLSKMEQNGIMSTACGTPG 172
Query: 287 WMAPEVIKTSIFSKASDVWSYGVVLWELLTG 317
++APEV+ +SKA D WS GV+ + LL G
Sbjct: 173 YVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
3zuu_A 3uc4_A 3ujg_A 3udb_A
Length = 361
Score = 129 bits (325), Expect = 3e-33
Identities = 68/206 (33%), Positives = 92/206 (44%), Gaps = 20/206 (9%)
Query: 122 GEAIGEGGFGKVYKGIYE--KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLI 179
+ IG G FG + K+ VA+K I ENV++E H NIV
Sbjct: 25 VKDIGSGNFGVARLMRDKLTKELVAVKYI--ERGAAIDENVQREIINHRSLRHPNIVRFK 82
Query: 180 GVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIH 238
V L L ++MEYA GG L R+ + D + Q+ G++Y H + H
Sbjct: 83 EVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM---QICH 139
Query: 239 RDLKSSNVLL-SEPIENEDLQFKTLKITDFGLAREVYKTTHM--SAAGTYAWMAPEVIKT 295
RDLK N LL P LKI DFG ++ S GT A++APEV+
Sbjct: 140 RDLKLENTLLDGSPAPR-------LKICDFGYSK-SSVLHSQPKSTVGTPAYIAPEVLLR 191
Query: 296 SIFS-KASDVWSYGVVLWELLTGEIP 320
+ K +DVWS GV L+ +L G P
Sbjct: 192 QEYDGKIADVWSCGVTLYVMLVGAYP 217
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 126 bits (320), Expect = 3e-33
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 18/210 (8%)
Query: 121 FGEAIGEGGFGKVYKGIYEK---QEVAIKV-----AHPNPDENILENVKQEGKLLWLFDH 172
GE +G G F V K +K +E A K + E +++E +L H
Sbjct: 9 MGEELGSGQFAIVRKCR-QKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRH 67
Query: 173 RNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQ 231
NI++L + + L++E GG L + + + D + QI +G++YLH +
Sbjct: 68 PNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK 127
Query: 232 APISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS-AAGTYAWMAP 290
+ H DLK N++L ++++ +K+ DFG+A ++ GT ++AP
Sbjct: 128 ---RIAHFDLKPENIMLL----DKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 180
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIP 320
E++ +D+WS GV+ + LL+G P
Sbjct: 181 EIVNYEPLGLEADMWSIGVITYILLSGASP 210
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 131 bits (331), Expect = 3e-33
Identities = 61/209 (29%), Positives = 95/209 (45%), Gaps = 18/209 (8%)
Query: 121 FGEAIGEGGFGKVYKGIYEK--QEVAIKV---AHPNPDENILENVKQEGKLLWLFDHRNI 175
+ +G G +G+V + E AIK+ + + +E +L L DH NI
Sbjct: 41 RVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSS--NSKLLEEVAVLKLLDHPNI 98
Query: 176 VSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPI 234
+ L LVME +GG L + ++ K Q+ G+ YLH
Sbjct: 99 MKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH--- 155
Query: 235 SLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS-AAGTYAWMAPEVI 293
+++HRDLK N+LL ++ +KI DFGL+ M GT ++APEV+
Sbjct: 156 NIVHRDLKPENLLLESKEKDAL-----IKIVDFGLSAVFENQKKMKERLGTAYYIAPEVL 210
Query: 294 KTSIFSKASDVWSYGVVLWELLTGEIPYK 322
+ + + DVWS GV+L+ LL G P+
Sbjct: 211 RKK-YDEKCDVWSIGVILFILLAGYPPFG 238
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 126 bits (319), Expect = 3e-33
Identities = 57/205 (27%), Positives = 87/205 (42%), Gaps = 14/205 (6%)
Query: 120 IFGEAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVS 177
IG G +G+V + + A K E++ + KQE +++ DH NI+
Sbjct: 12 TLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDV-DRFKQEIEIMKSLDHPNIIR 70
Query: 178 LIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISL 236
L + + LVME GG L RV+ R R + + Y H ++
Sbjct: 71 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL---NV 127
Query: 237 IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS-AAGTYAWMAPEVIKT 295
HRDLK N L + LK+ DFGLA M GT +++P+V++
Sbjct: 128 AHRDLKPENFLFLTDSPD-----SPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEG 182
Query: 296 SIFSKASDVWSYGVVLWELLTGEIP 320
+ D WS GV+++ LL G P
Sbjct: 183 L-YGPECDEWSAGVMMYVLLCGYPP 206
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 126 bits (319), Expect = 4e-33
Identities = 66/210 (31%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 120 IFGEAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVS 177
IF +G G FG V+ E IK + + + +E ++ E ++L DH NI+
Sbjct: 25 IFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIK 84
Query: 178 LIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVL-----VDWAIQIAEGMNYLHCQ 231
+ V + +VME GG L R+++ + R L + Q+ + Y H Q
Sbjct: 85 IFEVFEDYHNMYIVMETCEGGELLERIVS-AQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 232 APISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS-AAGTYAWMAP 290
++H+DLK N+L + + +KI DFGLA H + AAGT +MAP
Sbjct: 144 ---HVVHKDLKPENILFQDTSPH-----SPIKIIDFGLAELFKSDEHSTNAAGTALYMAP 195
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIP 320
EV K + D+WS GVV++ LLTG +P
Sbjct: 196 EVFKRD-VTFKCDIWSAGVVMYFLLTGCLP 224
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 131 bits (331), Expect = 4e-33
Identities = 64/217 (29%), Positives = 93/217 (42%), Gaps = 25/217 (11%)
Query: 120 IFGEAIGEGGFGKVYKGIYEK--QEVAIKV------------AHPNPDENILENVKQEGK 165
+G G +G+V + E AIKV E E + E
Sbjct: 39 FKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEIS 98
Query: 166 LLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEG 224
LL DH NI+ L V LV E+ GG L +++ K + QI G
Sbjct: 99 LLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSG 158
Query: 225 MNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS-AAG 283
+ YLH +++HRD+K N+LL +KI DFGL+ K + G
Sbjct: 159 ICYLHKH---NIVHRDIKPENILLENKNSLL-----NIKIVDFGLSSFFSKDYKLRDRLG 210
Query: 284 TYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIP 320
T ++APEV+K +++ DVWS GV+++ LL G P
Sbjct: 211 TAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPP 246
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 128 bits (323), Expect = 4e-33
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 120 IFGEAIGEGGFGKVYKGIYEK---QEVAIKV----AHPNPDENILENVKQEGKLLWLFDH 172
E IG+G F V + I + Q+ A+K+ + E++K+E + + H
Sbjct: 27 ELCEVIGKGPFSVVRRCI-NRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 173 RNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVL-----VDWAIQIAEGMN 226
+IV L+ L +V E+ G L ++ R V + QI E +
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVK-RADAGFVYSEAVASHYMRQILEALR 144
Query: 227 YLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM--SAAGT 284
Y H ++IHRD+K VLL+ + +K+ FG+A ++ ++ + GT
Sbjct: 145 YCHDN---NIIHRDVKPHCVLLASKENS-----APVKLGGFGVAIQLGESGLVAGGRVGT 196
Query: 285 YAWMAPEVIKTSIFSKASDVWSYGVVLWELLTG 317
+MAPEV+K + K DVW GV+L+ LL+G
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 130 bits (329), Expect = 6e-33
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 15/211 (7%)
Query: 121 FGEAIGEGGFGKVYKGIYEK--QEVAIKV--AHPNPDENILENVKQEGKLLWLFDHRNIV 176
+G+G FG+V + QE A+KV + E++ +E +LL DH NI+
Sbjct: 30 GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 89
Query: 177 SLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPIS 235
L LV E GG L + +++ ++ Q+ G+ Y+H
Sbjct: 90 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---K 146
Query: 236 LIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS-AAGTYAWMAPEVIK 294
++HRDLK N+LL ++ ++I DFGL+ + M GT ++APEV+
Sbjct: 147 IVHRDLKPENLLLESKSKDA-----NIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH 201
Query: 295 TSIFSKASDVWSYGVVLWELLTGEIPYKSIN 325
+ + + DVWS GV+L+ LL+G P+ N
Sbjct: 202 GT-YDEKCDVWSTGVILYILLSGCPPFNGAN 231
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 127 bits (321), Expect = 6e-33
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 44/218 (20%)
Query: 120 IFGEAIGEGGFGKVYKGIYEK---QEVAIKVAHPNPDENILENVKQEGKLLW-LFDHRNI 175
+ + +G G GKV + + Q+ A+K+ + +P +QE W +I
Sbjct: 32 LSKQVLGLGVNGKVLECF-HRRTGQKCALKLLYDSPK------ARQEVDHHWQASGGPHI 84
Query: 176 VSLIGVC----LQSPKLCLVMEYARGGPL-NRVL-----------AGRKIRPDVLVDWAI 219
V ++ V L ++ME GG L +R+ A +R
Sbjct: 85 VCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMR--------- 135
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
I + +LH ++ HRD+K N+L + ++ LK+TDFG A+E +
Sbjct: 136 DIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKD-----AVLKLTDFGFAKETTQNALQ 187
Query: 280 SAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTG 317
+ T ++APEV+ + K+ D+WS GV+++ LL G
Sbjct: 188 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 225
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 126 bits (320), Expect = 6e-33
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 18/210 (8%)
Query: 121 FGEAIGEGGFGKVYKGIYEK---QEVAIKV-----AHPNPDENILENVKQEGKLLWLFDH 172
GE +G G F V K EK + A K + E++++E +L H
Sbjct: 15 TGEELGSGQFAVVKKCR-EKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 173 RNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQ 231
N+++L V + L++E GG L + + + + ++ QI G+ YLH
Sbjct: 74 PNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 232 APISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS-AAGTYAWMAP 290
+ H DLK N++L + ++ +KI DFGLA ++ GT ++AP
Sbjct: 134 ---QIAHFDLKPENIMLL----DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIP 320
E++ +D+WS GV+ + LL+G P
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASP 216
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 127 bits (322), Expect = 9e-33
Identities = 49/215 (22%), Positives = 91/215 (42%), Gaps = 35/215 (16%)
Query: 121 FGEAIGEGGFGKVYKGIYEK---QEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVS 177
E +G G FG V++ + EK + K + + VK E ++ H +++
Sbjct: 55 ILEELGSGAFGVVHRCV-EKATGRVFVAKFINTPYPLDK-YTVKNEISIMNQLHHPKLIN 112
Query: 178 LIGVCLQSPKLCLVMEYARGGPL-NRVL----------AGRKIRPDVLVDWAIQIAEGMN 226
L ++ L++E+ GG L +R+ +R Q EG+
Sbjct: 113 LHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMR---------QACEGLK 163
Query: 227 YLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS-AAGTY 285
++H S++H D+K N++ + +KI DFGLA ++ + T
Sbjct: 164 HMHEH---SIVHLDIKPENIMCETKKASS------VKIIDFGLATKLNPDEIVKVTTATA 214
Query: 286 AWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIP 320
+ APE++ +D+W+ GV+ + LL+G P
Sbjct: 215 EFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSP 249
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 129 bits (325), Expect = 2e-32
Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 18/207 (8%)
Query: 121 FGEAIGEGGFGKVYKGI--YEKQEVAIKV---AHPNPDENILENVKQEGKLLWLFDHRNI 175
+G+G FG+V K +QE A+KV A + + +E +LL DH NI
Sbjct: 26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD--TSTILREVELLKKLDHPNI 83
Query: 176 VSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPI 234
+ L + S +V E GG L + ++ ++ Q+ G+ Y+H
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH--- 140
Query: 235 SLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS-AAGTYAWMAPEVI 293
+++HRDLK N+LL ++ +KI DFGL+ + T M GT ++APEV+
Sbjct: 141 NIVHRDLKPENILLESKEKDC-----DIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL 195
Query: 294 KTSIFSKASDVWSYGVVLWELLTGEIP 320
+ + + + DVWS GV+L+ LL+G P
Sbjct: 196 RGT-YDEKCDVWSAGVILYILLSGTPP 221
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 129 bits (327), Expect = 2e-32
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 121 FGEAIGEGGFGKVYKGIYEK---QEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVS 177
E +G G FG V++ E+ A K + + E V++E + + + H +V+
Sbjct: 161 IHEELGTGAFGVVHRVT-ERATGNNFAAKFVMTPHESDK-ETVRKEIQTMSVLRHPTLVN 218
Query: 178 LIGVCLQSPKLCLVMEYARGGPL-NRVLAGR-KIRPDVLVDWAIQIAEGMNYLHCQAPIS 235
L ++ ++ E+ GG L +V K+ D V++ Q+ +G+ ++H +
Sbjct: 219 LHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---N 275
Query: 236 LIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS-AAGTYAWMAPEVIK 294
+H DLK N++ + N LK+ DFGL + + GT + APEV +
Sbjct: 276 YVHLDLKPENIMFTTKRSN------ELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAE 329
Query: 295 TSIFSKASDVWSYGVVLWELLTGEIP 320
+D+WS GV+ + LL+G P
Sbjct: 330 GKPVGYYTDMWSVGVLSYILLSGLSP 355
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 125 bits (316), Expect = 2e-32
Identities = 49/206 (23%), Positives = 93/206 (45%), Gaps = 18/206 (8%)
Query: 121 FGEAIGEGGFGKVYKGIYEK---QEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVS 177
E +G G FG V++ + E + K + VK+E +L + HRNI+
Sbjct: 9 IAEDLGRGEFGIVHRCV-ETSSKKTYMAKFVKVKGTDQ--VLVKKEISILNIARHRNILH 65
Query: 178 LIGVCLQSPKLCLVMEYARGGPL-NRVLA-GRKIRPDVLVDWAIQIAEGMNYLHCQAPIS 235
L +L ++ E+ G + R+ ++ +V + Q+ E + +LH +
Sbjct: 66 LHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---N 122
Query: 236 LIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS-AAGTYAWMAPEVIK 294
+ H D++ N++ + +KI +FG AR++ + + APEV +
Sbjct: 123 IGHFDIRPENIIYQTRRSST------IKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQ 176
Query: 295 TSIFSKASDVWSYGVVLWELLTGEIP 320
+ S A+D+WS G +++ LL+G P
Sbjct: 177 HDVVSTATDMWSLGTLVYVLLSGINP 202
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 123 bits (312), Expect = 3e-32
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 120 IFGEAIGEGGFGKVYKGIYE--KQEVAIKVAHPN--PDENILENVKQEGKLLWLFDHRNI 175
+ G+ +G G FGKV G ++ +VA+K+ + +++ +K+E + L LF H +I
Sbjct: 14 VLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 176 VSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPI 234
+ L V +VMEY GG L + + ++ QI ++Y H
Sbjct: 74 IKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH--- 130
Query: 235 SLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM--SAAGTYAWMAPEV 292
++HRDLK NVLL KI DFGL+ + ++ G+ + APEV
Sbjct: 131 MVVHRDLKPENVLLDA--------HMNAKIADFGLSN-MMSDGEFLRTSCGSPNYAAPEV 181
Query: 293 IKTSIFS-KASDVWSYGVVLWELLTGEIPY 321
I +++ D+WS GV+L+ LL G +P+
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer,
transferase, serine/threonine-protein kinase,
nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Length = 373
Score = 126 bits (318), Expect = 3e-32
Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 35/221 (15%)
Query: 115 DYNKLIFGEAIGEGGFGKVYKGIYEK---QEVAIKVAHPNPDENILENVKQEGKLLWLFD 171
+ + E +G G FG+V+K E ++A K+ ++ E VK E ++ D
Sbjct: 87 SFYTVSKTEILGGGRFGQVHKCE-ETATGLKLAAKIIKTRGMKDK-EEVKNEISVMNQLD 144
Query: 172 HRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVL----------AGRKIRPDVLVDWAIQ 220
H N++ L + LVMEY GG L +R++ ++ Q
Sbjct: 145 HANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK---------Q 195
Query: 221 IAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS 280
I EG+ ++H ++H DLK N+L + +KI DFGLAR +
Sbjct: 196 ICEGIRHMHQM---YILHLDLKPENILCVNRDAKQ------IKIIDFGLARRYKPREKLK 246
Query: 281 -AAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIP 320
GT ++APEV+ S +D+WS GV+ + LL+G P
Sbjct: 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP 287
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 125 bits (316), Expect = 4e-32
Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 35/212 (16%)
Query: 120 IFGEAIGEGGFGKVYKGIYEK---QEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIV 176
+G G VY+ +K + A+KV D+ + V+ E +L H NI+
Sbjct: 56 EVESELGRGATSIVYRCK-QKGTQKPYALKVLKKTVDK---KIVRTEIGVLLRLSHPNII 111
Query: 177 SLIGVCLQSPKLCLVMEYARGGPL-NRVL---------AGRKIRPDVLVDWAIQIAEGMN 226
L + ++ LV+E GG L +R++ A ++ QI E +
Sbjct: 112 KLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK---------QILEAVA 162
Query: 227 YLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS-AAGTY 285
YLH ++HRDLK N+L + P + LKI DFGL++ V M GT
Sbjct: 163 YLHEN---GIVHRDLKPENLLYATPAPD-----APLKIADFGLSKIVEHQVLMKTVCGTP 214
Query: 286 AWMAPEVIKTSIFSKASDVWSYGVVLWELLTG 317
+ APE+++ + D+WS G++ + LL G
Sbjct: 215 GYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine
kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing
protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB:
3lm0_A*
Length = 327
Score = 125 bits (315), Expect = 4e-32
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 24/213 (11%)
Query: 120 IFGEAIGEGGFGKVYKGIYEK---QEVAIKV---AHPNPDENILENVKQEGKLLWLFDHR 173
+ + +G G F V + I K QE A K D + E +L L
Sbjct: 32 LTSKELGRGKFAVVRQCI-SKSTGQEYAAKFLKKRRRGQDC--RAEILHEIAVLELAKSC 88
Query: 174 -NIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIR---PDVLVDWAIQIAEGMNYL 228
+++L V + ++ L++EYA GG + + L DV + QI EG+ YL
Sbjct: 89 PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDV-IRLIKQILEGVYYL 147
Query: 229 HCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS-AAGTYAW 287
H +++H DLK N+LLS D+ KI DFG++R++ + GT +
Sbjct: 148 HQN---NIVHLDLKPQNILLSSIYPLGDI-----KIVDFGMSRKIGHACELREIMGTPEY 199
Query: 288 MAPEVIKTSIFSKASDVWSYGVVLWELLTGEIP 320
+APE++ + A+D+W+ G++ + LLT P
Sbjct: 200 LAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 125 bits (316), Expect = 4e-32
Identities = 53/225 (23%), Positives = 97/225 (43%), Gaps = 49/225 (21%)
Query: 121 FGEAIGEGGFGKVYKGIYEK---QEVAIKV-------AHPNPDENILENVKQEGKLL-WL 169
+ IG G V + + + E A+K+ P E + E ++E +L +
Sbjct: 98 PKDVIGRGVSSVVRRCV-HRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQV 156
Query: 170 FDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVL---------AGRKIRPDVLVDWAI 219
H +I++LI S + LV + R G L + + +R
Sbjct: 157 AGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMR--------- 207
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
+ E +++LH +++HRDLK N+LL + ++++DFG + + +
Sbjct: 208 SLLEAVSFLHAN---NIVHRDLKPENILLDDN--------MQIRLSDFGFSCHLEPGEKL 256
Query: 280 S-AAGTYAWMAPEVIKTSIF------SKASDVWSYGVVLWELLTG 317
GT ++APE++K S+ K D+W+ GV+L+ LL G
Sbjct: 257 RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 124 bits (314), Expect = 5e-32
Identities = 67/256 (26%), Positives = 99/256 (38%), Gaps = 66/256 (25%)
Query: 121 FGEAIGEGGFGKVYKGIYEK---QEVAIKV----AHPNPDENILENVKQEGKLLWLFDHR 173
AIG+G +G V I E AIK+ + +E +K E +L+ H
Sbjct: 30 LKGAIGQGSYGVVRVAI-ENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHP 88
Query: 174 NIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAI------------- 219
NI L V +CLVME GG L +++ +
Sbjct: 89 NIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEE 148
Query: 220 ---------------------------QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPI 252
QI ++YLH Q + HRD+K N L S
Sbjct: 149 AINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTN- 204
Query: 253 ENEDLQFKTLKITDFGLAREVYKTTH------MSAAGTYAWMAPEVIKTSI--FSKASDV 304
+ + +K+ DFGL++E YK + + AGT ++APEV+ T+ + D
Sbjct: 205 --KSFE---IKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDA 259
Query: 305 WSYGVVLWELLTGEIP 320
WS GV+L LL G +P
Sbjct: 260 WSAGVLLHLLLMGAVP 275
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 127 bits (320), Expect = 6e-32
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 121 FGEAIGEGGFGKVYKGIYEK---QEVAIKV---AHPNPDENILENVKQEGKLLWLFDHRN 174
E +G+G F V + + + QE A + + ++ + +++E ++ L H N
Sbjct: 15 LFEELGKGAFSVVRRCV-KVLAGQEYAAMIINTKKLSARDH--QKLEREARICRLLKHPN 71
Query: 175 IVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAP 233
IV L + L+ + GG L ++A QI E + + H
Sbjct: 72 IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM-- 129
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM--SAAGTYAWMAPE 291
++HR+LK N+LL+ ++ + K+ DFGLA EV AGT +++PE
Sbjct: 130 -GVVHRNLKPENLLLASKLKGAAV-----KLADFGLAIEVEGEQQAWFGFAGTPGYLSPE 183
Query: 292 VIKTSIFSKASDVWSYGVVLWELLTG 317
V++ + K D+W+ GV+L+ LL G
Sbjct: 184 VLRKDPYGKPVDLWACGVILYILLVG 209
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 125 bits (316), Expect = 1e-31
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 43/218 (19%)
Query: 120 IFGEAIGEGGFGKVYKGI--YEKQEVAIKVAHPNPDENILENVKQEGKLLW-LFDHRNIV 176
+ + +G G GKV + +++ A+K+ P ++E +L W +IV
Sbjct: 65 VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK------ARREVELHWRASQCPHIV 118
Query: 177 SLIGVC----LQSPKLCLVMEYARGGPL-NRVL-----------AGRKIRPDVLVDWAIQ 220
++ V L +VME GG L +R+ A ++
Sbjct: 119 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---------S 169
Query: 221 IAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS 280
I E + YLH ++ HRD+K N+L + N LK+TDFG A+E ++
Sbjct: 170 IGEAIQYLHSI---NIAHRDVKPENLLYTSKRPN-----AILKLTDFGFAKETTSHNSLT 221
Query: 281 -AAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTG 317
T ++APEV+ + K+ D+WS GV+++ LL G
Sbjct: 222 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 123 bits (310), Expect = 1e-31
Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 45/225 (20%)
Query: 120 IFGEAIGEGGFGKVYKGI--YEKQEVAIKVAHPNPDENILENVKQEGKLLW-LFDHRNIV 176
+ + +GEG +V I QE A+K+ P V +E ++L+ HRN++
Sbjct: 16 LQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIR-SRVFREVEMLYQCQGHRNVL 74
Query: 177 SLIGVCLQSPKLCLVMEYARGGPL-NRVL---------AGRKIRPDVLVDWAIQIAEGMN 226
LI + + LV E RGG + + + A ++ +A ++
Sbjct: 75 ELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ---------DVASALD 125
Query: 227 YLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYA 286
+LH + + HRDLK N+L P + +KI DF L + S T
Sbjct: 126 FLHNK---GIAHRDLKPENILCEHPNQVSP-----VKICDFDLGSGIKLNGDCSPISTPE 177
Query: 287 W---------MAPEVIK-----TSIFSKASDVWSYGVVLWELLTG 317
MAPEV++ SI+ K D+WS GV+L+ LL+G
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 121 bits (306), Expect = 3e-31
Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 32/217 (14%)
Query: 121 FGEAIGEGGFGKVYKGIYEK---QEVAIKV--------AHPNPDENILENVKQEGKLL-W 168
E +G G V + I K +E A+K+ + + E +E +L
Sbjct: 21 PKEILGRGVSSVVRRCI-HKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRK 79
Query: 169 LFDHRNIVSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNY 227
+ H NI+ L + LV + + G L + + + + E +
Sbjct: 80 VSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICA 139
Query: 228 LHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS-AAGTYA 286
LH +++HRDLK N+LL + +K+TDFG + ++ + GT +
Sbjct: 140 LHKL---NIVHRDLKPENILLDDD--------MNIKLTDFGFSCQLDPGEKLREVCGTPS 188
Query: 287 WMAPEVIKTSIF------SKASDVWSYGVVLWELLTG 317
++APE+I+ S+ K D+WS GV+++ LL G
Sbjct: 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 122 bits (307), Expect = 3e-31
Identities = 56/225 (24%), Positives = 86/225 (38%), Gaps = 48/225 (21%)
Query: 121 FGEAIGEGGFGKVYKGIYE--KQEVAIKVA-----HPNPDENILENVKQEGKLLWLFDHR 173
G +G GGFG VY GI VAIK + V E LL
Sbjct: 47 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 106
Query: 174 --NIVSLIGVCLQSPKLCLVMEYARG-----------GPLNRVLAGRKIRPDVLVDWAIQ 220
++ L+ + L++E G L LA Q
Sbjct: 107 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW---------Q 157
Query: 221 IAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA----REVYKT 276
+ E + + H ++HRD+K N+L+ DL LK+ DFG VY
Sbjct: 158 VLEAVRHCHNC---GVLHRDIKDENILI-------DLNRGELKLIDFGSGALLKDTVYTD 207
Query: 277 THMSAAGTYAWMAPEVIKTSIFS-KASDVWSYGVVLWELLTGEIP 320
GT + PE I+ + +++ VWS G++L++++ G+IP
Sbjct: 208 F----DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 248
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 120 bits (302), Expect = 9e-31
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 19/208 (9%)
Query: 120 IFGEAIGEGGFGKVYKGIYE--KQEVAIKVAHPN--PDENILENVKQEGKLLWLFDHRNI 175
+ +GEG F KV + Q+VA+K+ + ++ +++E L L H +I
Sbjct: 16 QIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHI 75
Query: 176 VSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPIS 235
+ L V ++ +V+EYA + ++ K+ + QI + Y H
Sbjct: 76 IKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---K 132
Query: 236 LIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM--SAAGTYAWMAPEVI 293
++HRDLK N+LL E +KI DFGL+ + + ++ G+ + APEVI
Sbjct: 133 IVHRDLKPENLLLDE--------HLNVKIADFGLSN-IMTDGNFLKTSCGSPNYAAPEVI 183
Query: 294 KTSIFS-KASDVWSYGVVLWELLTGEIP 320
+++ DVWS GV+L+ +L +P
Sbjct: 184 SGKLYAGPEVDVWSCGVILYVMLCRRLP 211
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 122 bits (309), Expect = 2e-30
Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 18/208 (8%)
Query: 120 IFGEAIGEGGFGKVYKGIYE--KQEVAIKVAHPN--PDENILENVKQEGKLLWLFDHRNI 175
I G+ +G G FGKV G +E +VA+K+ + +++ +++E + L LF H +I
Sbjct: 19 ILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHI 78
Query: 176 VSLIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPI 234
+ L V + +VMEY GG L + + ++ QI G++Y H
Sbjct: 79 IKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH--- 135
Query: 235 SLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAA-GTYAWMAPEVI 293
++HRDLK NVLL KI DFGL+ + + + G+ + APEVI
Sbjct: 136 MVVHRDLKPENVLLDA--------HMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVI 187
Query: 294 KTSIFS-KASDVWSYGVVLWELLTGEIP 320
+++ D+WS GV+L+ LL G +P
Sbjct: 188 SGRLYAGPEVDIWSSGVILYALLCGTLP 215
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 119 bits (301), Expect = 2e-30
Identities = 52/217 (23%), Positives = 87/217 (40%), Gaps = 32/217 (14%)
Query: 122 GEAIGEGGFGKVYKGIYE--KQEVAIKVA-----HPNPDENILENVKQEGKLLWLFD--- 171
G +G+GGFG V+ G + +VAIKV + E LLW
Sbjct: 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGG 95
Query: 172 -HRNIVSLIGVCLQSPKLCLVMEYA-RGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYL 228
H ++ L+ LV+E L + + + + Q+ + +
Sbjct: 96 GHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHC 155
Query: 229 HCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLA----REVYKTTHMSAAGT 284
H + ++HRD+K N+L+ DL+ K+ DFG E Y GT
Sbjct: 156 HSR---GVVHRDIKDENILI-------DLRRGCAKLIDFGSGALLHDEPYTDF----DGT 201
Query: 285 YAWMAPEVIKTSIFS-KASDVWSYGVVLWELLTGEIP 320
+ PE I + + VWS G++L++++ G+IP
Sbjct: 202 RVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIP 238
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 120 bits (302), Expect = 3e-30
Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 21/207 (10%)
Query: 122 GEAIGEGGFGKVYKGIYE--KQEVAIKVAHPN--PDENILENVKQEGKLLWLFDHRNIVS 177
E +GEG FGKV + +Q+VA+K ++ V++E L L H +I+
Sbjct: 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIK 73
Query: 178 LIGVCLQSPKLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISL 236
L V + +V+EYA GG L + ++ +++ D + QI + Y H +
Sbjct: 74 LYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH---KI 129
Query: 237 IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM--SAAGTYAWMAPEVIK 294
+HRDLK N+LL + +KI DFGL+ + + ++ G+ + APEVI
Sbjct: 130 VHRDLKPENLLLDDN--------LNVKIADFGLSN-IMTDGNFLKTSCGSPNYAAPEVIN 180
Query: 295 TSIFS-KASDVWSYGVVLWELLTGEIP 320
+++ DVWS G+VL+ +L G +P
Sbjct: 181 GKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 118 bits (298), Expect = 6e-30
Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 24/247 (9%)
Query: 121 FGEAIGEGGFGKVY--KGIYEKQEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIV 176
FG+ +GEG F V + + +E AIK+ EN + V +E ++ DH V
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 177 SLIGVCLQSP-KLCLVMEYARGGPLNRVL-AGRKIRPDVLVDWAIQIAEGMNYLHCQAPI 234
L Q KL + YA+ G L + + + +I + YLH +
Sbjct: 94 KLYF-TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK--- 149
Query: 235 SLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAA----GTYAWMAP 290
+IHRDLK N+LL + ++ITDFG A+ + + + A GT +++P
Sbjct: 150 GIIHRDLKPENILL-------NEDMH-IQITDFGTAKVLSPESKQARANSFVGTAQYVSP 201
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNKLTLP--IPSTCPQ 348
E++ K+SD+W+ G ++++L+ G P+++ N Y + + + P
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 261
Query: 349 LFKTLME 355
L + L+
Sbjct: 262 LVEKLLV 268
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 118 bits (298), Expect = 7e-30
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 120 IFGEAIGEGGFGKVYKGIYE--KQEVAIKV-------AHPNPDENILENVKQEGKLLWLF 170
+G G FG V+ + + +EV +K ++ L V E +L
Sbjct: 27 STMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV 86
Query: 171 DHRNIVSLIGVCLQSPKLCLVME-YARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYL 228
+H NI+ ++ + LVME + G L + ++ + Q+ + YL
Sbjct: 87 EHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYL 146
Query: 229 HCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS-AAGTYAW 287
+ +IHRD+K N++++E T+K+ DFG A + + GT +
Sbjct: 147 RLK---DIIHRDIKDENIVIAE--------DFTIKLIDFGSAAYLERGKLFYTFCGTIEY 195
Query: 288 MAPEVIKTSIFS-KASDVWSYGVVLWELLTGEIPY 321
APEV+ + + ++WS GV L+ L+ E P+
Sbjct: 196 CAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 118 bits (297), Expect = 8e-30
Identities = 61/348 (17%), Positives = 110/348 (31%), Gaps = 101/348 (29%)
Query: 115 DYNKLIFGEAIGEGGFGKVYKG--IYEKQEVAI-----------------------KVAH 149
D+ + + +G GGFG V++ + AI K+ H
Sbjct: 7 DFEPI---QCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEH 63
Query: 150 PNP----------------------------------DENILENVKQEGKLLWLFDHRNI 175
P + ++ + + + F +N
Sbjct: 64 PGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNT 123
Query: 176 VSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRK----IRPDVLVDWAIQIAEGMNYLHCQ 231
V + L + M+ R L + R V + IQIAE + +LH +
Sbjct: 124 VGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK 183
Query: 232 APISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV--------------YKTT 277
L+HRDLK SN+ + +K+ DFGL + T
Sbjct: 184 ---GLMHRDLKPSNIFFTMD--------DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYAT 232
Query: 278 HMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNK 337
H GT +M+PE I + +S D++S G++L+ELL + + N
Sbjct: 233 HTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLY---SFSTQMERVRIITDVRNL 289
Query: 338 LTLPIPSTCPQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQ 385
+ + +++ RP I++ + +
Sbjct: 290 KFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE-------NAIFE 330
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 117 bits (295), Expect = 3e-29
Identities = 32/305 (10%), Positives = 88/305 (28%), Gaps = 68/305 (22%)
Query: 118 KLIFGEAIGEGGFGKVYKG--IYEKQEVAIKVAH--PNPDENILENVKQEGKLLWLF--- 170
L+ G +G+ + + + V + P N ++ +K+E L L
Sbjct: 74 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGI 133
Query: 171 ----------------------DHRNIVSLIGVC--LQSPKLCLVMEYARGGPL------ 200
+ ++ + + + +
Sbjct: 134 KNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVL 193
Query: 201 -NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQF 259
+ + + + +Q+ + LH L+H L+ +++L +
Sbjct: 194 LSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYLRPVDIVLDQ--------R 242
Query: 260 KTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKT-----------SIFSKASDVWSYG 308
+ +T F + ++ + + PE+ ++ + + D W+ G
Sbjct: 243 GGVFLTGFEHLVRD--GARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALG 300
Query: 309 VVLWELLTGEIPYKSINAYAVAYGVAVNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSF 368
+V++ + ++P A + + PQ + L+E R
Sbjct: 301 LVIYWIWCADLPITKDAALGGS------EWIFRSCKNIPQPVRALLEGFLRYPKEDRLLP 354
Query: 369 KTILK 373
++
Sbjct: 355 LQAME 359
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 118 bits (296), Expect = 4e-29
Identities = 39/305 (12%), Positives = 84/305 (27%), Gaps = 63/305 (20%)
Query: 116 YNKLIFGEAIGEGGFGKVYKGIYEK--QEVAIKV--AHPNPDENILENVKQEGKLL---- 167
L+ G +G+ + ++ + + V P N ++ +K+E L
Sbjct: 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLR 136
Query: 168 ------------------WLFDHRNIVSLIGVCLQ-----SPKLCLVMEYARG--GPLNR 202
L +I V L + +
Sbjct: 137 GIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGE 196
Query: 203 VLAGRKIRPDVLVDWA-----IQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDL 257
VL LV A +Q+ + LH L+H L+ +++L +
Sbjct: 197 VLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYLRPVDIVLD-----QRG 248
Query: 258 QFKTLKITDFGLAR---EVYKTTHMSAAGTYAWMAPEVIK-----TSIFSKASDVWSYGV 309
+ +T F + A ++ ++ + A D W+ G+
Sbjct: 249 G---VFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGL 305
Query: 310 VLWELLTGEIPYKSINAYAVAYGVAVNKLTLPIPSTCPQLFKTLMEACWEADSHMRPSFK 369
++ + ++P A + + PQ + L+E R
Sbjct: 306 AIYWIWCADLPNTDDAALGGSEWI------FRSCKNIPQPVRALLEGFLRYPKEDRLLPL 359
Query: 370 TILKA 374
++
Sbjct: 360 QAMET 364
>3pvu_A Beta-adrenergic receptor kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding, I
membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A*
3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A*
1bak_A
Length = 695
Score = 117 bits (295), Expect = 4e-28
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 36/218 (16%)
Query: 125 IGEGGFGKVY-------KGIY-----EKQEVAIK--VAHPNPDENILENVKQEGKLLWLF 170
IG GGFG+VY +Y +K+ + +K + +L V
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG------- 249
Query: 171 DHRNIVSLIGVCLQSP-KLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYL 228
D IV + +P KL +++ GG L + + +A +I G+ ++
Sbjct: 250 DCPFIVCMSY-AFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 308
Query: 229 HCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWM 288
H + +++RDLK +N+LL D ++I+D GLA + K ++ GT+ +M
Sbjct: 309 HNR---FVVYRDLKPANILL-------DEH-GHVRISDLGLACDFSKKKPHASVGTHGYM 357
Query: 289 APEVI-KTSIFSKASDVWSYGVVLWELLTGEIPYKSIN 325
APEV+ K + ++D +S G +L++LL G P++
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 395
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics,
structural genomics consortium, SGC, TR; HET: STU; 2.29A
{Homo sapiens}
Length = 384
Score = 114 bits (287), Expect = 6e-28
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 36/215 (16%)
Query: 124 AIGEGGFGKVY-------KGIYEKQEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRN 174
AIG+G FGKV K +Y A+K + + N + NV +E +++ +H
Sbjct: 22 AIGKGSFGKVCIVQKNDTKKMY-----AMKYMNKQKCVERNEVRNVFKELQIMQGLEHPF 76
Query: 175 IVSLIGVCLQSP-KLCLVMEYARGGPLNRVLAGRKIR---PDVLVDWAIQIAEGMNYLHC 230
+V+L Q + +V++ GG L R + + V + + ++ ++YL
Sbjct: 77 LVNLWY-SFQDEEDMFMVVDLLLGGDL-RYHLQQNVHFKEETVKL-FICELVMALDYLQN 133
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV-YKTTHMSAAGTYAWMA 289
Q +IHRD+K N+LL D + ITDF +A + +T + AGT +MA
Sbjct: 134 Q---RIIHRDMKPDNILL-------DEH-GHVHITDFNIAAMLPRETQITTMAGTKPYMA 182
Query: 290 PEVIKTSIF---SKASDVWSYGVVLWELLTGEIPY 321
PE+ + S A D WS GV +ELL G PY
Sbjct: 183 PEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 109 bits (274), Expect = 9e-27
Identities = 54/221 (24%), Positives = 86/221 (38%), Gaps = 64/221 (28%)
Query: 120 IFGEAIGEGGFGKVYKGIYEK---QEVAIKVAHPNPDENILENVKQEGKLLW-LFDHRNI 175
+ + +G G GKV + K ++ A+K+ P ++E +L W +I
Sbjct: 21 VTSQVLGLGINGKVLQIF-NKRTQEKFALKMLQDCPK------ARREVELHWRASQCPHI 73
Query: 176 VSLIGVC----LQSPKLCLVMEYARGGPL-NRVL-----------AGRKIRPDVLVDWAI 219
V ++ V L +VME GG L +R+ A ++
Sbjct: 74 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK--------- 124
Query: 220 QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHM 279
I E + YLH ++ HRD+K N+L + N LK+TDFG
Sbjct: 125 SIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPN-----AILKLTDFGF---------- 166
Query: 280 SAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIP 320
A E + K+ D+WS GV+++ LL G P
Sbjct: 167 ---------AKETTGEK-YDKSCDMWSLGVIMYILLCGYPP 197
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein
coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl
ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB:
3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Length = 543
Score = 112 bits (283), Expect = 9e-27
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 36/219 (16%)
Query: 125 IGEGGFGKVY-------KGIYEKQEVAIKV---AHPNPDENILENVKQEGKLLWLFDHRN 174
+G GGFG+V+ +Y A K + + E K+L R
Sbjct: 193 LGRGGFGEVFACQMKATGKLY-----ACKKLNKKRLKKRKGY-QGAMVEKKILAKVHSRF 246
Query: 175 IVSLIGVCLQSP-KLCLVMEYARGGPL-----NRVLAGRKIRPDVLVDWAIQIAEGMNYL 228
IVSL ++ LCLVM GG + N + + + QI G+ +L
Sbjct: 247 IVSLAY-AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 229 HCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV--YKTTHMSAAGTYA 286
H + ++I+RDLK NVLL D ++I+D GLA E+ +T AGT
Sbjct: 306 HQR---NIIYRDLKPENVLL-------DDD-GNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 287 WMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSIN 325
+MAPE++ + + D ++ GV L+E++ P+++
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo
sapiens} PDB: 3a8w_A* 1zrz_A*
Length = 345
Score = 108 bits (271), Expect = 5e-26
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 33/229 (14%)
Query: 125 IGEGGFGKVY-------KGIYEKQEVAIKV---AHPNPDENILENVKQEGKLLWL-FDHR 173
IG G + KV IY A+KV N DE+I + V+ E + +H
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIY-----AMKVVKKELVNDDEDI-DWVQTEKHVFEQASNHP 70
Query: 174 NIVSLIGVCLQSP-KLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQ 231
+V L C Q+ +L V+EY GG L + RK+ + ++ +I+ +NYLH +
Sbjct: 71 FLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 129
Query: 232 APISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE--VYKTTHMSAAGTYAWMA 289
+I+RDLK NVLL D + +K+TD+G+ +E T + GT ++A
Sbjct: 130 ---GIIYRDLKLDNVLL-------DSE-GHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIA 178
Query: 290 PEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNKL 338
PE+++ + + D W+ GV+++E++ G P+ + + + L
Sbjct: 179 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 227
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 110 bits (276), Expect = 8e-26
Identities = 70/318 (22%), Positives = 120/318 (37%), Gaps = 45/318 (14%)
Query: 29 NHRPDLWRALYDYDAI--GLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEY-KV 85
+ R R L G D + +V ++ + EY V
Sbjct: 96 DKRKACGRNLTQNFLSHTGPDLIPEVPRQLVTNCTQRLEQGPCKDLFQELTRLTHEYLSV 155
Query: 86 GIFPANFVSSIEDINLVSSVINDVKLVEIDYNKLIFGEAIGEGGFGKVY-------KGIY 138
F S + L + + + + + +G+GGFG+V +Y
Sbjct: 156 APFADYLDSIYFNRFLQWKWLERQPVTKNTFRQY---RVLGKGGFGEVCACQVRATGKMY 212
Query: 139 EKQEVAIKV---AHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSP-KLCLVMEY 194
A K + E ++L + R +VSL ++ LCLV+
Sbjct: 213 -----ACKKLEKKRIKKRKGE-AMALNEKQILEKVNSRFVVSLAY-AYETKDALCLVLTL 265
Query: 195 ARGGPLN---RVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEP 251
GG L + V +A +I G+ LH + +++RDLK N+LL +
Sbjct: 266 MNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDH 322
Query: 252 --IENEDLQFKTLKITDFGLAREVY--KTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSY 307
I +I+D GLA V +T GT +MAPEV+K ++ + D W+
Sbjct: 323 GHI----------RISDLGLAVHVPEGQTIK-GRVGTVGYMAPEVVKNERYTFSPDWWAL 371
Query: 308 GVVLWELLTGEIPYKSIN 325
G +L+E++ G+ P++
Sbjct: 372 GCLLYEMIAGQSPFQQRK 389
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU;
CAMP-dependent protein kinase,catalytic mechanism, ATP
hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A
{Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E*
1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A*
1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A*
3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Length = 350
Score = 107 bits (269), Expect = 9e-26
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 125 IGEGGFGKVY--KGIYEKQEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIVSLIG 180
+G G FG+V K A+K+ +E+ E ++L + +V L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 VCLQSP-KLCLVMEYARGGPLNRVLAGRKIR---PDVLVDWAIQIAEGMNYLHCQAPISL 236
+ L +VMEY GG + L R+I +A QI YLH L
Sbjct: 109 -SFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL---DL 162
Query: 237 IHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTS 296
I+RDLK N+L+ Q +++TDFG A+ V T + GT +APE+I +
Sbjct: 163 IYRDLKPENLLID--------QQGYIQVTDFGFAKRVKGRTW-TLCGTPEALAPEIILSK 213
Query: 297 IFSKASDVWSYGVVLWELLTGEIPY 321
++KA D W+ GV+++E+ G P+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition,
allosteric inhibitor, kinase inhibitor hydrophobic
collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB:
3o96_A*
Length = 446
Score = 108 bits (272), Expect = 1e-25
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 31/215 (14%)
Query: 125 IGEGGFGKVY-------KGIYEKQEVAIKV---AHPNPDENILENVKQEGKLLWLFDHRN 174
+G+G FGKV Y A+K+ + + + E ++L H
Sbjct: 156 LGKGTFGKVILVKEKATGRYY-----AMKILKKEVIVAKDEV-AHTLTENRVLQNSRHPF 209
Query: 175 IVSLIGVCLQSP-KLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQA 232
+ +L Q+ +LC VMEYA GG L + R D + +I ++YLH +
Sbjct: 210 LTALKY-SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 268
Query: 233 PISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE--VYKTTHMSAAGTYAWMAP 290
+ ++RDLK N++L D +KITDFGL +E T + GT ++AP
Sbjct: 269 NV--VYRDLKLENLML-------DKD-GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAP 318
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSIN 325
EV++ + + +A D W GVV++E++ G +P+ + +
Sbjct: 319 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 353
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis,
transferase; 2.00A {Leishmania major}
Length = 360
Score = 107 bits (269), Expect = 1e-25
Identities = 59/251 (23%), Positives = 100/251 (39%), Gaps = 50/251 (19%)
Query: 94 SSIEDINLVSSVINDVKLVEIDYNKLIFGEAIGEGGFGKVYKGIYEK--QEVAIKVAHPN 151
S+ +N ++ + + G+G FG V G + VAIK
Sbjct: 3 GSMMSLNAAAAADERSRKEMDRFQVE---RMAGQGTFGTVQLGKEKSTGMSVAIK----- 54
Query: 152 PDENILENVK------QEGKLLWLFDHRNIVSLIGVCLQSPK--------LCLVMEYARG 197
++++ + Q + L + H NIV L + L +VMEY
Sbjct: 55 ---KVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSY-FYTLGERDRRDIYLNVVMEYV-P 109
Query: 198 GPLNRVLAGRKIRPDVLVDWAI-----QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPI 252
L+R R I Q+ + LH + +++ HRD+K NVL+
Sbjct: 110 DTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS-VNVCHRDIKPHNVLV---- 164
Query: 253 ENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYA---WM-APEVIKTSI-FSKASDVWSY 307
+ TLK+ DFG A+++ + A Y + APE+I + ++ A D+WS
Sbjct: 165 ---NEADGTLKLCDFGSAKKLSPSEPNVA---YICSRYYRAPELIFGNQHYTTAVDIWSV 218
Query: 308 GVVLWELLTGE 318
G + E++ GE
Sbjct: 219 GCIFAEMMLGE 229
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity,
atypical PKC, trans transferase substrate complex; HET:
TPO ADE; 2.40A {Mus musculus}
Length = 396
Score = 107 bits (270), Expect = 1e-25
Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 33/229 (14%)
Query: 125 IGEGGFGKVY-------KGIYEKQEVAIKV---AHPNPDENILENVKQEGKLLWL-FDHR 173
IG G + KV IY A++V N DE+I + V+ E + +H
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIY-----AMRVVKKELVNDDEDI-DWVQTEKHVFEQASNHP 113
Query: 174 NIVSLIGVCLQSP-KLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQ 231
+V L C Q+ +L V+EY GG L + RK+ + ++ +I+ +NYLH +
Sbjct: 114 FLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 172
Query: 232 APISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE--VYKTTHMSAAGTYAWMA 289
+I+RDLK NVLL D + +K+TD+G+ +E T + GT ++A
Sbjct: 173 ---GIIYRDLKLDNVLL-------DSE-GHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIA 221
Query: 290 PEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNKL 338
PE+++ + + D W+ GV+++E++ G P+ + + + L
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 270
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase,
inhibitor, transf transferase inhibitor complex; HET:
0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A*
2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A*
2h9v_A*
Length = 410
Score = 107 bits (270), Expect = 2e-25
Identities = 65/278 (23%), Positives = 118/278 (42%), Gaps = 50/278 (17%)
Query: 90 ANFVSSIEDINLVSSVINDVKLVEIDYNKLIFGEAIGEGGFGKVY-------KGIY---- 138
NF+S +D + I D+++ DY + + IG G FG+V + +Y
Sbjct: 48 DNFLSRYKD---TINKIRDLRMKAEDYEVV---KVIGRGAFGEVQLVRHKSTRKVYAMKL 101
Query: 139 -EKQEVAIK--VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSP-KLCLVMEY 194
K E+ + A + +I+ + +V L Q L +VMEY
Sbjct: 102 LSKFEMIKRSDSAFFWEERDIMAFA----------NSPWVVQLFY-AFQDDRYLYMVMEY 150
Query: 195 ARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIEN 254
GG L +++ + + ++ ++ +H IHRD+K N+LL
Sbjct: 151 MPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLD----- 202
Query: 255 EDLQFKTLKITDFGLAREVYKTTHM---SAAGTYAWMAPEVIKT----SIFSKASDVWSY 307
+ LK+ DFG ++ K + +A GT +++PEV+K+ + + D WS
Sbjct: 203 ---KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSV 259
Query: 308 GVVLWELLTGEIPYKSINAYAVAYGVAVNKLTLPIPST 345
GV L+E+L G+ P+ + + + +K +L P
Sbjct: 260 GVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD 297
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase,
transferase, serine/threonine-protein kinase; HET: TPO
ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A*
2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A*
3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A
1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Length = 337
Score = 105 bits (265), Expect = 2e-25
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 36/217 (16%)
Query: 125 IGEGGFGKVY-------KGIYEKQEVAIKVAHPNPDENILEN-----VKQEGKLLWLFDH 172
+G+G FGKV Y A+K+ E I+ E ++L H
Sbjct: 13 LGKGTFGKVILVREKATGRYY-----AMKILR---KEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 173 RNIVSLIGVCLQSP-KLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHC 230
+ +L Q+ +LC VMEYA GG L + R + + +I + YLH
Sbjct: 65 PFLTALKY-AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE--VYKTTHMSAAGTYAWM 288
+ +++RD+K N++L D +KITDFGL +E T + GT ++
Sbjct: 124 R---DVVYRDIKLENLML-------DKD-GHIKITDFGLCKEGISDGATMKTFCGTPEYL 172
Query: 289 APEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSIN 325
APEV++ + + +A D W GVV++E++ G +P+ + +
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 209
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open
conformation, transferase; HET: TPO; 2.80A
{Saccharomyces cerevisiae} SCOP: d.144.1.7
Length = 318
Score = 104 bits (263), Expect = 3e-25
Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 29/208 (13%)
Query: 125 IGEGGFGKVY--KGIYEKQEVAIKVAHPNPDENIL-----ENVKQEGKLLWLFDHRNIVS 177
+G G FG+V+ + + + A+KV E ++ E+ E +L + H I+
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLK---KEIVVRLKQVEHTNDERLMLSIVTHPFIIR 70
Query: 178 LIGVCLQSP-KLCLVMEYARGGPLNRVLAGRKIR---PDVLVDWAIQIAEGMNYLHCQAP 233
+ G Q ++ ++M+Y GG L +L RK + V +A ++ + YLH +
Sbjct: 71 MWG-TFQDAQQIFMIMDYIEGGELFSLL--RKSQRFPNPVAKFYAAEVCLALEYLHSK-- 125
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVI 293
+I+RDLK N+LL D +KITDFG A+ V T+ + GT ++APEV+
Sbjct: 126 -DIIYRDLKPENILL-------DKN-GHIKITDFGFAKYVPDVTY-TLCGTPDYIAPEVV 175
Query: 294 KTSIFSKASDVWSYGVVLWELLTGEIPY 321
T ++K+ D WS+G++++E+L G P+
Sbjct: 176 STKPYNKSIDWWSFGILIYEMLAGYTPF 203
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive,
active, ribosomal S6 kinase, activation, alternative
initiation, ATP-binding; HET: TPO STU; 2.35A {Homo
sapiens} PDB: 3a61_A* 3a60_A*
Length = 327
Score = 104 bits (262), Expect = 6e-25
Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 34/218 (15%)
Query: 125 IGEGGFGKVY----------KGIYEKQEVAIKV---AHPNPDENILENVKQEGKLLWLFD 171
+G+GG+GKV+ I+ A+KV A + + K E +L
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIF-----AMKVLKKAMIVRNAKDTAHTKAERNILEEVK 79
Query: 172 HRNIVSLIGVCLQSP-KLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLH 229
H IV LI Q+ KL L++EY GG L ++ D + +I+ + +LH
Sbjct: 80 HPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 230 CQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE--VYKTTHMSAAGTYAW 287
+ +I+RDLK N++L + Q +K+TDFGL +E T + GT +
Sbjct: 139 QK---GIIYRDLKPENIML-------NHQ-GHVKLTDFGLCKESIHDGTVTHTFCGTIEY 187
Query: 288 MAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSIN 325
MAPE++ S ++A D WS G +++++LTG P+ N
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN 225
>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of
P90 ribosomal S6 kinase 2, ATP- binding,
nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus
musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A*
Length = 325
Score = 103 bits (259), Expect = 1e-24
Identities = 68/246 (27%), Positives = 125/246 (50%), Gaps = 32/246 (13%)
Query: 94 SSIEDINLVSSVINDVKLVEIDYNKLIFGEAIGEGGFGKVY----KGIYEKQEV-AIKVA 148
SI++I + V + + +L+ + +G+G FGKV+ + +++ A+KV
Sbjct: 3 GSIKEIAITHHVKEGHEKADPSQFELL--KVLGQGSFGKVFLVKKISGSDARQLYAMKVL 60
Query: 149 HPNPDENILEN----VKQEGKLLWLFDHRNIVSLIGVCLQSP-KLCLVMEYARGGPL-NR 202
+ K E +L +H IV L Q+ KL L++++ RGG L R
Sbjct: 61 K---KATLKVRDRVRTKMERDILVEVNHPFIVKLH-YAFQTEGKLYLILDFLRGGDLFTR 116
Query: 203 VLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTL 262
+ + + + ++A +++LH +I+RDLK N+LL D + +
Sbjct: 117 LSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILL-------DEE-GHI 165
Query: 263 KITDFGLARE---VYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEI 319
K+TDFGL++E K + S GT +MAPEV+ ++++D WS+GV+++E+LTG +
Sbjct: 166 KLTDFGLSKESIDHEKKAY-SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 224
Query: 320 PYKSIN 325
P++ +
Sbjct: 225 PFQGKD 230
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase,
transferase-transferase inhibito; HET: TPO 07U; 2.05A
{Homo sapiens}
Length = 353
Score = 103 bits (260), Expect = 2e-24
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 33/216 (15%)
Query: 125 IGEGGFGKVY-------KGIYEKQEVAIKV---AHPNPDENILENVKQEGKLLWL-FDHR 173
+G+G FGKV +Y A+KV D+++ E E ++L L +H
Sbjct: 31 LGKGSFGKVMLARVKETGDLY-----AVKVLKKDVILQDDDV-ECTMTEKRILSLARNHP 84
Query: 174 NIVSLIGVCLQSP-KLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQ 231
+ L C Q+P +L VME+ GG L + R+ +A +I + +LH +
Sbjct: 85 FLTQLFC-CFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK 143
Query: 232 APISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE--VYKTTHMSAAGTYAWMA 289
+I+RDLK NVLL D + K+ DFG+ +E T + GT ++A
Sbjct: 144 ---GIIYRDLKLDNVLL-------DHE-GHCKLADFGMCKEGICNGVTTATFCGTPDYIA 192
Query: 290 PEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSIN 325
PE+++ ++ A D W+ GV+L+E+L G P+++ N
Sbjct: 193 PEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN 228
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB
structural genomics consortium, TBSG fold, FHAA,
transferase; 2.26A {Mycobacterium tuberculosis} PDB:
3oun_B* 3otv_A 3ouk_A
Length = 286
Score = 102 bits (256), Expect = 2e-24
Identities = 35/255 (13%), Positives = 69/255 (27%), Gaps = 46/255 (18%)
Query: 122 GEAIGEGGFGKVYKGIYEK--QEVAIKVAHPNP--DENILENVKQEGKLLWLFDHRNIVS 177
G + ++ + ++VA+ P +++L+ L D +
Sbjct: 36 LIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVAR 95
Query: 178 LIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLI 237
++ V +V E+ RGG L V P + +A + H +A +
Sbjct: 96 VLDVVHTRAGGLVVAEWIRGGSLQEVADTS-PSPVGAIRAMQSLAAAADAAH-RAGV--A 151
Query: 238 HRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSI 297
S V +S + + +
Sbjct: 152 LSIDHPSRVRVSI--------DGDVVLAYPATMPDA------------------------ 179
Query: 298 FSKASDVWSYGVVLWELLTGEIPYKS---INAYAVAYGVAVNKLTLP--IPSTCPQLFKT 352
+ D+ G L+ LL P + A A + P I P
Sbjct: 180 -NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISA 238
Query: 353 LMEACWEADSHMRPS 367
+ + D +R +
Sbjct: 239 VAARSVQGDGGIRSA 253
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 104 bits (261), Expect = 2e-24
Identities = 59/225 (26%), Positives = 92/225 (40%), Gaps = 41/225 (18%)
Query: 112 VEIDYNKLIFGEAIGEGGFGKVYKGI-YEKQEVAIK-VAHPNPDENILENVKQEGKLLWL 169
EI Y + IG G FG V++ E EVAIK V +N +E +++ +
Sbjct: 38 REIAYTNC---KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKN------RELQIMRI 88
Query: 170 FDHRNIVSLIGVCLQS------PKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAI---- 219
H N+V L + L LV+EY + R + I
Sbjct: 89 VKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV-PETVYRASRHYAKLKQTMPMLLIKLYM 147
Query: 220 -QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTH 278
Q+ + Y+H + HRD+K N+LL D LK+ DFG A+ +
Sbjct: 148 YQLLRSLAYIHSI---GICHRDIKPQNLLL-------DPPSGVLKLIDFGSAKILIAGEP 197
Query: 279 MSAAGTYA---WM-APEVIKTSI-FSKASDVWSYGVVLWELLTGE 318
+ Y + APE+I + ++ D+WS G V+ EL+ G+
Sbjct: 198 NVS---YICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 106 bits (265), Expect = 2e-24
Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 33/216 (15%)
Query: 125 IGEGGFGKVY-------KGIYEKQEVAIKV---AHPNPDENILENVKQEGKLLWL-FDHR 173
+G+G FGKV +Y A+K+ D+++ E E ++L L
Sbjct: 349 LGKGSFGKVMLSERKGTDELY-----AVKILKKDVVIQDDDV-ECTMVEKRVLALPGKPP 402
Query: 174 NIVSLIGVCLQSP-KLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQ 231
+ L C Q+ +L VMEY GG L + + + V +A +IA G+ +L +
Sbjct: 403 FLTQLHS-CFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 461
Query: 232 APISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE--VYKTTHMSAAGTYAWMA 289
+I+RDLK NV+L D + +KI DFG+ +E T + GT ++A
Sbjct: 462 ---GIIYRDLKLDNVML-------DSE-GHIKIADFGMCKENIWDGVTTKTFCGTPDYIA 510
Query: 290 PEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSIN 325
PE+I + K+ D W++GV+L+E+L G+ P++ +
Sbjct: 511 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 546
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 103 bits (258), Expect = 2e-24
Identities = 65/225 (28%), Positives = 98/225 (43%), Gaps = 45/225 (20%)
Query: 115 DYNKLIFGEAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQEG-------- 164
Y ++ +GEG +G+VYK I + VAIK LE+ + EG
Sbjct: 35 RYRRI---TKLGEGTYGEVYKAIDTVTNETVAIKRIR-------LEHEE-EGVPGTAIRE 83
Query: 165 -KLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAG-----RKIRPDVLVDWA 218
LL HRNI+ L V + +L L+ EY L + V+ +
Sbjct: 84 VSLLKELQHRNIIELKSVIHHNHRLHLIFEY-----AENDLKKYMDKNPDVSMRVIKSFL 138
Query: 219 IQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR----EVY 274
Q+ G+N+ H + +HRDLK N+LLS +E LKI DFGLAR +
Sbjct: 139 YQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPV---LKIGDFGLARAFGIPIR 192
Query: 275 KTTHMSAAGTYAWMAPEVI-KTSIFSKASDVWSYGVVLWELLTGE 318
+ TH T + PE++ + +S + D+WS + E+L
Sbjct: 193 QFTHEII--TLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKT 235
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 103 bits (259), Expect = 3e-24
Identities = 55/225 (24%), Positives = 88/225 (39%), Gaps = 41/225 (18%)
Query: 120 IFGEAIGEGGFGKVYKGIYE----KQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNI 175
G +G G +G VYK + ++ A+K I + +E LL H N+
Sbjct: 24 YEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIE---GTGISMSACREIALLRELKHPNV 80
Query: 176 VSLIGVCLQS--PKLCLVMEYA---------RGGPLNRVLAGRKIRPDVLVDWAIQIAEG 224
+SL V L K+ L+ +YA ++ ++ QI +G
Sbjct: 81 ISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDG 140
Query: 225 MNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT 284
++YLH ++HRDLK +N+L+ +KI D G AR
Sbjct: 141 IHYLHAN---WVLHRDLKPANILVMGEGPERG----RVKIADMGFARLFNSPLK-----P 188
Query: 285 YAWMAPEVIK-----------TSIFSKASDVWSYGVVLWELLTGE 318
A + P V+ ++KA D+W+ G + ELLT E
Sbjct: 189 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase,
transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB:
3iw4_A*
Length = 353
Score = 102 bits (257), Expect = 4e-24
Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 49/224 (21%)
Query: 125 IGEGGFGKVY-------KGIYEKQEVAIK------------VAHPNPDENILENVKQEGK 165
+G+G FGKV +Y A+K V ++ +L +
Sbjct: 28 LGKGSFGKVMLSERKGTDELY-----AVKILKKDVVIQDDDVECTMVEKRVLALPGK--- 79
Query: 166 LLWLFDHRNIVSLIGVCLQSP-KLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAE 223
+ L C Q+ +L VMEY GG L + + + V +A +IA
Sbjct: 80 ------PPFLTQLHS-CFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAI 132
Query: 224 GMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE--VYKTTHMSA 281
G+ +L + +I+RDLK NV+L D + +KI DFG+ +E T +
Sbjct: 133 GLFFLQSK---GIIYRDLKLDNVML-------DSE-GHIKIADFGMCKENIWDGVTTKTF 181
Query: 282 AGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSIN 325
GT ++APE+I + K+ D W++GV+L+E+L G+ P++ +
Sbjct: 182 CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 225
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 102 bits (257), Expect = 4e-24
Identities = 58/220 (26%), Positives = 89/220 (40%), Gaps = 40/220 (18%)
Query: 123 EAIGEGGFGKVYKGIY-EKQEVAIK----VAHPNPDENILENVK------QEGKLLWLFD 171
I G +G V G+ E VAIK NIL + +E +LL F
Sbjct: 28 RFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH 87
Query: 172 HRNIVSLIGVCLQSPKLC------LVMEYARGGPLNRVLAGRKIRPDVLVDWAI-----Q 220
H NI+ L + + LV E L +V+ + V+ I
Sbjct: 88 HPNILGLRDI-FVHFEEPAMHKLYLVTELM-RTDLAQVI---HDQRIVISPQHIQYFMYH 142
Query: 221 IAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMS 280
I G++ LH +A + +HRDL N+LL ++ + I DF LARE + +
Sbjct: 143 ILLGLHVLH-EAGV--VHRDLHPGNILL-----ADNND---ITICDFNLAREDTADANKT 191
Query: 281 A-AGTYAWMAPEVIKTS-IFSKASDVWSYGVVLWELLTGE 318
+ APE++ F+K D+WS G V+ E+ +
Sbjct: 192 HYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 103 bits (259), Expect = 4e-24
Identities = 61/228 (26%), Positives = 95/228 (41%), Gaps = 46/228 (20%)
Query: 112 VEIDYNKLIFGEAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQEG---KL 166
E+ Y + IG G FG VY+ + VAIK +L++ + + ++
Sbjct: 52 QEVSYTDT---KVIGNGSFGVVYQAKLCDSGELVAIK--------KVLQDKRFKNRELQI 100
Query: 167 LWLFDHRNIVSLIGVCLQS------PKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAI- 219
+ DH NIV L S L LV++Y + RV L +
Sbjct: 101 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVIYVK 159
Query: 220 ----QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK 275
Q+ + Y+H + HRD+K N+LL D LK+ DFG A+++ +
Sbjct: 160 LYMYQLFRSLAYIHSF---GICHRDIKPQNLLL-------DPDTAVLKLCDFGSAKQLVR 209
Query: 276 TTHMSAAGTYA---WM-APEVIKTSIF-SKASDVWSYGVVLWELLTGE 318
+Y + APE+I + + + DVWS G VL ELL G+
Sbjct: 210 GEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase;
HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7
PDB: 2jed_A*
Length = 345
Score = 102 bits (256), Expect = 5e-24
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 49/224 (21%)
Query: 125 IGEGGFGKVY-------KGIYEKQEVAIK------------VAHPNPDENILENVKQEGK 165
+G+G FGKV+ + AIK V ++ +L
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFF-----AIKALKKDVVLMDDDVECTMVEKRVLSLA----- 74
Query: 166 LLWLFDHRNIVSLIGVCLQSP-KLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAE 223
++H + + Q+ L VMEY GG L + + K +A +I
Sbjct: 75 ----WEHPFLTHMFC-TFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIIL 129
Query: 224 GMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE--VYKTTHMSA 281
G+ +LH + +++RDLK N+LL D +KI DFG+ +E + +
Sbjct: 130 GLQFLHSK---GIVYRDLKLDNILL-------DKD-GHIKIADFGMCKENMLGDAKTNTF 178
Query: 282 AGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEIPYKSIN 325
GT ++APE++ ++ + D WS+GV+L+E+L G+ P+ +
Sbjct: 179 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 222
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 101 bits (255), Expect = 5e-24
Identities = 62/225 (27%), Positives = 97/225 (43%), Gaps = 49/225 (21%)
Query: 115 DYNKLIFGEAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQ----EGKLLW 168
Y L +GEG +G V K + + VAIK + D+ + VK+ E KLL
Sbjct: 26 KYENL---GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDD---KMVKKIAMREIKLLK 79
Query: 169 LFDHRNIVSLIGVCLQSPKLCLVMEY----------ARGGPLNRVLAGRKIRPDVLVDWA 218
H N+V+L+ VC + + LV E+ L+ V+ +
Sbjct: 80 QLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLD---------YQVVQKYL 130
Query: 219 IQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE----VY 274
QI G+ + H ++IHRD+K N+L+S+ +K+ DFG AR
Sbjct: 131 FQIINGIGFCHSH---NIIHRDIKPENILVSQS--------GVVKLCDFGFARTLAAPGE 179
Query: 275 KTTHMSAAGTYAWMAPEVI-KTSIFSKASDVWSYGVVLWELLTGE 318
A T + APE++ + KA DVW+ G ++ E+ GE
Sbjct: 180 VYDDEVA--TRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA;
HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Length = 437
Score = 103 bits (258), Expect = 6e-24
Identities = 57/280 (20%), Positives = 108/280 (38%), Gaps = 51/280 (18%)
Query: 97 EDINLVSSVINDVKLVEIDYNKLIFGEAIGEGGFGKVY-------KGIY-----EKQEVA 144
E + + VK + + + IG G FG+V ++ K E+
Sbjct: 54 EYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML 113
Query: 145 IK--VAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQSP-KLCLVMEYARGGPLN 201
+ A + ++L N D + I +L Q L LVM+Y GG L
Sbjct: 114 KRAETACFREERDVLVNG----------DSKWITTLHY-AFQDDNNLYLVMDYYVGGDLL 162
Query: 202 RVLAGRKIRPDVLVDWAI----QIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDL 257
+L K + + A ++ ++ +H +HRD+K N+L+ D+
Sbjct: 163 TLL--SKFEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILM-------DM 210
Query: 258 QFKTLKITDFGLAREVYK---TTHMSAAGTYAWMAPEVIKTSIFS-----KASDVWSYGV 309
+++ DFG ++ + A GT +++PE+++ D WS GV
Sbjct: 211 NGH-IRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGV 269
Query: 310 VLWELLTGEIPYKSINAYAVAYGVAVNKLTLPIPSTCPQL 349
++E+L GE P+ + + + +K P+ +
Sbjct: 270 CMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDV 309
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase,
ATP-BI nucleotide-binding, cardiac contractility, muscle
different; HET: BI8; 2.80A {Homo sapiens}
Length = 412
Score = 102 bits (257), Expect = 6e-24
Identities = 56/252 (22%), Positives = 100/252 (39%), Gaps = 49/252 (19%)
Query: 125 IGEGGFGKVY-------KGIY-----EKQEVAIK--VAHPNPDENILENVKQEGKLLWLF 170
IG G F +V +Y K ++ + V+ + ++L N
Sbjct: 69 IGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG---------- 118
Query: 171 DHRNIVSLIGVCLQSP-KLCLVMEYARGGPLNRVL--AGRKIRPDVLVDWAIQIAEGMNY 227
D R I L Q L LVMEY GG L +L G +I ++ + +I ++
Sbjct: 119 DRRWITQLHF-AFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDS 177
Query: 228 LHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY---KTTHMSAAGT 284
+H +HRD+K N+LL D +++ DFG ++ + A GT
Sbjct: 178 VHRL---GYVHRDIKPDNILL-------DRCGH-IRLADFGSCLKLRADGTVRSLVAVGT 226
Query: 285 YAWMAPEVIK-------TSIFSKASDVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNK 337
+++PE+++ T + D W+ GV +E+ G+ P+ + + + K
Sbjct: 227 PDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYK 286
Query: 338 LTLPIPSTCPQL 349
L +P +
Sbjct: 287 EHLSLPLVDEGV 298
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 100 bits (252), Expect = 9e-24
Identities = 60/219 (27%), Positives = 96/219 (43%), Gaps = 37/219 (16%)
Query: 115 DYNKLIFGEAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQ----EGKLLW 168
Y K+ IGEG +G V+K Q VAIK + D+ +K+ E ++L
Sbjct: 4 KYEKI---GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDD---PVIKKIALREIRMLK 57
Query: 169 LFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVLVDWAIQIAEGMN 226
H N+V+L+ V + +L LV EY + L R + ++ Q + +N
Sbjct: 58 QLKHPNLVNLLEVFRRKRRLHLVFEYCDHT-VLHELDRYQRGVPEHLVKSITWQTLQAVN 116
Query: 227 YLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLARE------VYKTTHMS 280
+ H + IHRD+K N+L+++ +K+ DFG AR Y
Sbjct: 117 FCHKH---NCIHRDVKPENILITKH--------SVIKLCDFGFARLLTGPSDYY--DDEV 163
Query: 281 AAGTYAWMAPEVI-KTSIFSKASDVWSYGVVLWELLTGE 318
A Y +PE++ + + DVW+ G V ELL+G
Sbjct: 164 ATRWY--RSPELLVGDTQYGPPVDVWAIGCVFAELLSGV 200
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 99.9 bits (250), Expect = 1e-23
Identities = 64/221 (28%), Positives = 93/221 (42%), Gaps = 42/221 (19%)
Query: 115 DYNKLIFGEAIGEGGFGKVYKGIYEKQE-VAIKVAHPNPDENILENVKQEG--------- 164
Y+ L E IGEG +G VYK E A+K ++ EG
Sbjct: 3 KYHGL---EKIGEGTYGVVYKAQNNYGETFALKKIRLEKED--------EGIPSTTIREI 51
Query: 165 KLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVLVDWAIQIA 222
+L H NIV L V +L LV E+ L ++L + + +Q+
Sbjct: 52 SILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQD-LKKLLDVCEGGLESVTAKSFLLQLL 110
Query: 223 EGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR----EVYKTTH 278
G+ Y H + ++HRDLK N+L++ LKI DFGLAR V K TH
Sbjct: 111 NGIAYCHDR---RVLHRDLKPQNLLINRE--------GELKIADFGLARAFGIPVRKYTH 159
Query: 279 MSAAGTYAWMAPEVI-KTSIFSKASDVWSYGVVLWELLTGE 318
Y AP+V+ + +S D+WS G + E++ G
Sbjct: 160 EIVTLWY--RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 100 bits (252), Expect = 1e-23
Identities = 67/221 (30%), Positives = 97/221 (43%), Gaps = 42/221 (19%)
Query: 115 DYNKLIFGEAIGEGGFGKVYKGIYEKQE-VAIKVAHPNPDENILENVKQEG--------- 164
Y KL E +GEG +G VYK + VA+K L+ EG
Sbjct: 22 KYQKL---EKVGEGTYGVVYKAKDSQGRIVALKRIR-------LDAED-EGIPSTAIREI 70
Query: 165 KLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVLVDWAIQIA 222
LL H NIVSLI V L LV E+ L +VL ++ + + Q+
Sbjct: 71 SLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKD-LKKVLDENKTGLQDSQIKIYLYQLL 129
Query: 223 EGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR----EVYKTTH 278
G+ + H ++HRDLK N+L++ LK+ DFGLAR V TH
Sbjct: 130 RGVAHCHQH---RILHRDLKPQNLLINSD--------GALKLADFGLARAFGIPVRSYTH 178
Query: 279 MSAAGTYAWMAPEVI-KTSIFSKASDVWSYGVVLWELLTGE 318
Y AP+V+ + +S + D+WS G + E++TG+
Sbjct: 179 EVVTLWY--RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase,
apoptosis, ATP-binding, cytoplasm, endoplasmic
reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A
{Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Length = 373
Score = 100 bits (250), Expect = 4e-23
Identities = 72/247 (29%), Positives = 113/247 (45%), Gaps = 28/247 (11%)
Query: 89 PANFVSSIEDINLVSSVINDVKLVEIDYNKLIFGEAIGEGGFGKVY--KGIYEKQEVAIK 146
PA + + INL S K + + K+I G+G FGKV + E+ A+K
Sbjct: 15 PAPPPAPSQQINLGPSSNPHAKPSDFHFLKVI-----GKGSFGKVLLARHKAEEVFYAVK 69
Query: 147 V---AHPNPDENILENVKQEGKLLWL-FDHRNIVSLIGVCLQSP-KLCLVMEYARGGPL- 200
V + +++ E +L H +V L Q+ KL V++Y GG L
Sbjct: 70 VLQKKAILKKKEE-KHIMSERNVLLKNVKHPFLVGLHF-SFQTADKLYFVLDYINGGELF 127
Query: 201 NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK 260
+ R +A +IA + YLH ++++RDLK N+LL D Q
Sbjct: 128 YHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILL-------DSQ-G 176
Query: 261 TLKITDFGLARE--VYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGE 318
+ +TDFGL +E + +T + GT ++APEV+ + + D W G VL+E+L G
Sbjct: 177 HIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGL 236
Query: 319 IPYKSIN 325
P+ S N
Sbjct: 237 PPFYSRN 243
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase,
phosphorylation, serine/threonine protein kinase; 1.8A
{Homo sapiens} SCOP: d.144.1.7
Length = 355
Score = 99.7 bits (249), Expect = 5e-23
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 125 IGEGGFGKVY----KGIYEKQEV-AIKV---AHPNPDENILENVKQEGKLLWLFDHRN-I 175
+G G +GKV+ ++ ++ A+KV A E+ + E ++L +
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 121
Query: 176 VSLIGVCLQSP-KLCLVMEYARGGPL-NRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAP 233
V+L Q+ KL L+++Y GG L + + + + +I + +LH
Sbjct: 122 VTLHY-AFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL-- 178
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY----KTTHMSAAGTYAWMA 289
+I+RD+K N+LL D + +TDFGL++E + + GT +MA
Sbjct: 179 -GIIYRDIKLENILL-------DSN-GHVVLTDFGLSKEFVADETERAY-DFCGTIEYMA 228
Query: 290 PEVIKTSI--FSKASDVWSYGVVLWELLTGEIPYKSIN 325
P++++ KA D WS GV+++ELLTG P+
Sbjct: 229 PDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDG 266
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 98.0 bits (245), Expect = 6e-23
Identities = 61/225 (27%), Positives = 97/225 (43%), Gaps = 43/225 (19%)
Query: 115 DYNKLIFGEAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQEG-------- 164
Y KL E IGEG +G V+K + + VA+K L++ EG
Sbjct: 3 KYEKL---EKIGEGTYGTVFKAKNRETHEIVALKRVR-------LDDDD-EGVPSSALRE 51
Query: 165 -KLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL--AGRKIRPDVLVDWAIQI 221
LL H+NIV L V KL LV E+ L + + P+++ + Q+
Sbjct: 52 ICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQD-LKKYFDSCNGDLDPEIVKSFLFQL 110
Query: 222 AEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR----EVYKTT 277
+G+ + H + +++HRDLK N+L++ LK+ +FGLAR V +
Sbjct: 111 LKGLGFCHSR---NVLHRDLKPQNLLINRN--------GELKLANFGLARAFGIPVRCYS 159
Query: 278 HMSAAGTYAWMAPEVI-KTSIFSKASDVWSYGVVLWELLTGEIPY 321
Y P+V+ ++S + D+WS G + EL P
Sbjct: 160 AEVVTLWY--RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 98.0 bits (245), Expect = 6e-23
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 44/223 (19%)
Query: 115 DYNKLIFGEAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQEG-------- 164
++ K+ E IGEG +G VYK + + VA+K L+ EG
Sbjct: 4 NFQKV---EKIGEGTYGVVYKARNKLTGEVVALKKIR-------LDTET-EGVPSTAIRE 52
Query: 165 -KLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVL---AGRKIRPDVLVDWAIQ 220
LL +H NIV L+ V KL LV E+ L + + A I ++ + Q
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQ 111
Query: 221 IAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR----EVYKT 276
+ +G+ + H ++HRDLK N+L++ +K+ DFGLAR V
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTE--------GAIKLADFGLARAFGVPVRTY 160
Query: 277 THMSAAGTYAWMAPEVI-KTSIFSKASDVWSYGVVLWELLTGE 318
TH Y APE++ +S A D+WS G + E++T
Sbjct: 161 THEVVTLWY--RAPEILLGAKYYSTAVDIWSLGCIFAEMVTRR 201
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 97.7 bits (244), Expect = 1e-22
Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 34/217 (15%)
Query: 115 DYNKLIFGEAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQEGKLLWLFDH 172
Y KL + +GEG + VYKG + VA+K +E +E LL H
Sbjct: 3 TYIKL---DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKH 59
Query: 173 RNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLA------GRKIRPDVLVDWAIQIAEGMN 226
NIV+L + L LV EY L++ L G I + + Q+ G+
Sbjct: 60 ANIVTLHDIIHTEKSLTLVFEY-----LDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLA 114
Query: 227 YLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR----EVYKTTHMSAA 282
Y H Q ++HRDLK N+L++E LK+ DFGLAR +
Sbjct: 115 YCHRQ---KVLHRDLKPQNLLINER--------GELKLADFGLARAKSIPTKTYDNEVVT 163
Query: 283 GTYAWMAPEVI-KTSIFSKASDVWSYGVVLWELLTGE 318
Y P+++ ++ +S D+W G + +E+ TG
Sbjct: 164 LWY--RPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in
transferase-transferase inhibitor complex; HET: JBI;
2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Length = 464
Score = 99.5 bits (248), Expect = 1e-22
Identities = 63/209 (30%), Positives = 96/209 (45%), Gaps = 27/209 (12%)
Query: 123 EAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQ---EGKLLWLFDHRNIVS 177
+ IG G G V + VAIK P +N K+ E L+ +H+NI+S
Sbjct: 68 KPIGSGAQGIVCAAYDAVLDRNVAIK-KLSRPFQNQTH-AKRAYRELVLMKCVNHKNIIS 125
Query: 178 LIGVCLQSPKLC------LVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQ 231
L+ V L LVME L +V+ ++ + + Q+ G+ +LH
Sbjct: 126 LLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-QMELDHERMSYLLYQMLCGIKHLHSA 183
Query: 232 APISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAP 290
+IHRDLK SN+++ D TLKI DFGLAR + M+ T + AP
Sbjct: 184 ---GIIHRDLKPSNIVV-----KSDC---TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 232
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGEI 319
EVI + + D+WS G ++ E++ +I
Sbjct: 233 EVILGMGYKENVDIWSVGCIMGEMVRHKI 261
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 97.3 bits (243), Expect = 1e-22
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 29/217 (13%)
Query: 115 DYNKLIFGEAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQEGKLLWLFDH 172
+ +L E +G G + VYKG+ + VA+K + +E +E L+ H
Sbjct: 6 QFKQL---EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 173 RNIVSLIGVCLQSPKLCLVMEYARG------GPLNRVLAGRKIRPDVLVDWAIQIAEGMN 226
NIV L V KL LV E+ R + +++ + Q+ +G+
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 227 YLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR----EVYKTTHMSAA 282
+ H ++HRDLK N+L+++ LK+ DFGLAR V +
Sbjct: 123 FCHEN---KILHRDLKPQNLLINKR--------GQLKLGDFGLARAFGIPVNTFSSEVV- 170
Query: 283 GTYAWMAPEVI-KTSIFSKASDVWSYGVVLWELLTGE 318
T + AP+V+ + +S + D+WS G +L E++TG+
Sbjct: 171 -TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 96.9 bits (242), Expect = 4e-22
Identities = 62/237 (26%), Positives = 98/237 (41%), Gaps = 61/237 (25%)
Query: 115 DYNKLIFGEAIGEGGFGKVYKG--IYEKQEVAIKVAHPNPDENILENVKQEG-------- 164
Y KL IG+G FG+V+K Q+VA+K + ++EN K EG
Sbjct: 18 KYEKL---AKIGQGTFGEVFKARHRKTGQKVALK-------KVLMENEK-EGFPITALRE 66
Query: 165 -KLLWLFDHRNIVSLIGVC--------LQSPKLCLVMEYARGGPLNRVLAG------RKI 209
K+L L H N+V+LI +C + LV ++ LAG K
Sbjct: 67 IKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDF-----CEHDLAGLLSNVLVKF 121
Query: 210 RPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGL 269
+ + G+ Y+H ++HRD+K++NVL++ + LK+ DFGL
Sbjct: 122 TLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLIT----RD----GVLKLADFGL 170
Query: 270 AREVYKTTHMSAAGTYA------WM-APEVI-KTSIFSKASDVWSYGVVLWELLTGE 318
AR + S Y W PE++ + D+W G ++ E+ T
Sbjct: 171 ARA-FSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRS 226
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling
pathways, linear binding motif; HET: ANP; 1.33A {Homo
sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A*
2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X*
2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A*
1pmq_A* ...
Length = 371
Score = 97.1 bits (242), Expect = 4e-22
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 27/208 (12%)
Query: 123 EAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQ---EGKLLWLFDHRNIVS 177
+ IG G G V + VAIK P +N K+ E L+ +H+NI+
Sbjct: 31 KPIGSGAQGIVCAAYDAILERNVAIK-KLSRPFQNQTH-AKRAYRELVLMKCVNHKNIIG 88
Query: 178 LIGVCLQSPKLC------LVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQ 231
L+ V L +VME L +V+ ++ + + Q+ G+ +LH
Sbjct: 89 LLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-QMELDHERMSYLLYQMLCGIKHLHSA 146
Query: 232 APISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAP 290
+IHRDLK SN+++ D LKI DFGLAR + M+ T + AP
Sbjct: 147 ---GIIHRDLKPSNIVV-----KSDCT---LKILDFGLARTAGTSFMMTPYVVTRYYRAP 195
Query: 291 EVIKTSIFSKASDVWSYGVVLWELLTGE 318
EVI + + D+WS G ++ E++ G
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMIKGG 223
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 96.5 bits (241), Expect = 4e-22
Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 30/217 (13%)
Query: 115 DYNKLIFGEAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQ----EGKLLW 168
Y KL + +GEG F VYK + Q VAIK + + + E KLL
Sbjct: 11 RYEKL---DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQ 67
Query: 169 LFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIR--PDVLVDWAIQIAEGMN 226
H NI+ L+ + LV ++ L ++ + P + + + +G+
Sbjct: 68 ELSHPNIIGLLDAFGHKSNISLVFDFMETD-LEVIIKDNSLVLTPSHIKAYMLMTLQGLE 126
Query: 227 YLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR----EVYKTTHMSAA 282
YLH ++HRDLK +N+LL E LK+ DFGLA+ TH
Sbjct: 127 YLHQH---WILHRDLKPNNLLLDE--NGV------LKLADFGLAKSFGSPNRAYTHQVVT 175
Query: 283 GTYAWMAPEVI-KTSIFSKASDVWSYGVVLWELLTGE 318
Y APE++ ++ D+W+ G +L ELL
Sbjct: 176 RWY--RAPELLFGARMYGVGVDMWAVGCILAELLLRV 210
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 96.1 bits (240), Expect = 5e-22
Identities = 60/238 (25%), Positives = 97/238 (40%), Gaps = 67/238 (28%)
Query: 115 DYNKLIFGEAIGEGGFGKVYKGIYEK---QEVAIKVAHPNPDENILENVKQEG------- 164
Y + IGEG +GKV+K K + VA+K ++ + EG
Sbjct: 12 QYECV---AEIGEGAYGKVFKARDLKNGGRFVALKRVR-------VQTGE-EGMPLSTIR 60
Query: 165 -----KLLWLFDHRNIVSLIGVC-----LQSPKLCLVMEYARGGPLNRVLAG-------R 207
+ L F+H N+V L VC + KL LV E+ +++ L
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEH-----VDQDLTTYLDKVPEP 115
Query: 208 KIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDF 267
+ + + D Q+ G+++LH ++HRDLK N+L++ +K+ DF
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSS--------GQIKLADF 164
Query: 268 GLAREVYKTTHMSAAGTYA------WM-APEVIKTSIFSKASDVWSYGVVLWELLTGE 318
GLAR S W APEV+ S ++ D+WS G + E+ +
Sbjct: 165 GLARI------YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2,
SH3 domain, TKL kinase, MKN28, structural GEN
structural genomics consortium, SGC; 2.00A {Homo
sapiens}
Length = 89
Score = 89.1 bits (221), Expect = 6e-22
Identities = 33/61 (54%), Positives = 49/61 (80%), Gaps = 3/61 (4%)
Query: 34 LWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFV 93
+W A++DY+A G +EL+LRRGD V+VLS+D A+SGD GWWTG++ +VG+FP+N+V
Sbjct: 31 VWTAVFDYEAAGDEELTLRRGDRVQVLSQDCAVSGDEGWWTGQLPSG---RVGVFPSNYV 87
Query: 94 S 94
+
Sbjct: 88 A 88
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 95.9 bits (239), Expect = 1e-21
Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 29/209 (13%)
Query: 123 EAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQ---EGKLLWLFDHRNIVS 177
+ +G G +G V + + +VAIK P ++ L K+ E +LL H N++
Sbjct: 31 QPVGSGAYGAVCSAVDGRTGAKVAIK-KLYRPFQSELF-AKRAYRELRLLKHMRHENVIG 88
Query: 178 LIGVCLQSPKLC------LVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQ 231
L+ V L LVM + G L +++ K+ D + Q+ +G+ Y+H
Sbjct: 89 LLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH-A 146
Query: 232 APISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWM-AP 290
A I IHRDLK N+ + NED + LKI DFGLAR+ + M+ W AP
Sbjct: 147 AGI--IHRDLKPGNLAV-----NEDCE---LKILDFGLARQA--DSEMTGYVVTRWYRAP 194
Query: 291 EVIKTS-IFSKASDVWSYGVVLWELLTGE 318
EVI +++ D+WS G ++ E++TG+
Sbjct: 195 EVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 95.0 bits (237), Expect = 2e-21
Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 123 EAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIG 180
IGEG +G V VAIK P + + +E K+L F H NI+ +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 181 VCLQSPKLC------LVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPI 234
+ +++P + +V + L ++L + + D + + QI G+ Y+H A +
Sbjct: 93 I-IRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH-SANV 149
Query: 235 SLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGT-YA---WM-A 289
+HRDLK SN+LL N LKI DFGLAR + T Y W A
Sbjct: 150 --LHRDLKPSNLLL-----NTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 290 PEVIKTS-IFSKASDVWSYGVVLWELLTGE 318
PE++ S ++K+ D+WS G +L E+L+
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 94.3 bits (235), Expect = 2e-21
Identities = 45/210 (21%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 123 EAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQEGKLL-WLFDHRNIVSLI 179
+G G + +V++ I ++V +K+ P + I +E K+L L NI++L
Sbjct: 42 RKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIK----REIKILENLRGGPNIITLA 97
Query: 180 GVCL--QSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAI-----QIAEGMNYLHCQA 232
+ S LV E+ ++ L D+ I +I + ++Y H
Sbjct: 98 DIVKDPVSRTPALVFEHVNNTDFKQLY-------QTLTDYDIRFYMYEILKALDYCHSM- 149
Query: 233 PISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA-AGTYAWMAPE 291
++HRD+K NV++ D + + L++ D+GLA + + + + PE
Sbjct: 150 --GIMHRDVKPHNVMI-------DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 200
Query: 292 VIKTS-IFSKASDVWSYGVVLWELLTGEIP 320
++ ++ + D+WS G +L ++ + P
Sbjct: 201 LLVDYQMYDYSLDMWSLGCMLASMIFRKEP 230
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 93.4 bits (233), Expect = 3e-21
Identities = 57/226 (25%), Positives = 92/226 (40%), Gaps = 41/226 (18%)
Query: 115 DYNKLIFGEAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQ----EGKLL- 167
Y + IG G +G VYK VA+K + E LL
Sbjct: 10 RYEPV---AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 168 --WLFDHRNIVSLIGVCL-----QSPKLCLVMEYARGGPLNRVLAG-------RKIRPDV 213
F+H N+V L+ VC + K+ LV E+ +++ L + +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEH-----VDQDLRTYLDKAPPPGLPAET 121
Query: 214 LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV 273
+ D Q G+++LH ++HRDLK N+L++ T+K+ DFGLAR
Sbjct: 122 IKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSG--------GTVKLADFGLARIY 170
Query: 274 YKTTHMSAAGTYAWM-APEVIKTSIFSKASDVWSYGVVLWELLTGE 318
++ W APEV+ S ++ D+WS G + E+ +
Sbjct: 171 SYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 93.9 bits (234), Expect = 4e-21
Identities = 66/210 (31%), Positives = 97/210 (46%), Gaps = 31/210 (14%)
Query: 123 EAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQ---EGKLLWLFDHRNIVS 177
+G G +G V K VA+K P ++I+ K+ E +LL H N++
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLRVAVK-KLSRPFQSIIH-AKRTYRELRLLKHMKHENVIG 92
Query: 178 LIGVCLQSPKLC-------LVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHC 230
L+ V + LV G LN ++ +K+ D + QI G+ Y+H
Sbjct: 93 LLDV-FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH- 149
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAW-MA 289
A I IHRDLK SN+ + NED + LKI DFGLAR M+ W A
Sbjct: 150 SADI--IHRDLKPSNLAV-----NEDCE---LKILDFGLARHT--ADEMTGYVATRWYRA 197
Query: 290 PEVIKTS-IFSKASDVWSYGVVLWELLTGE 318
PE++ +++ D+WS G ++ ELLTG
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 93.5 bits (233), Expect = 5e-21
Identities = 64/222 (28%), Positives = 97/222 (43%), Gaps = 44/222 (19%)
Query: 123 EAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIG 180
+GEG +G V ++ + VAIK P +E K+L F H NI+++
Sbjct: 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFN 76
Query: 181 VCLQSPKLC------LVMEYARGGPLNRVLAGRKIRPDVLVDWAI-----QIAEGMNYLH 229
+ + ++ E L+RV I +L D I Q + LH
Sbjct: 77 I-QRPDSFENFNEVYIIQELM-QTDLHRV-----ISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 230 CQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSA--AGTYAW 287
+ + IHRDLK SN+L+ N + LK+ DFGLAR + ++ ++ G +
Sbjct: 130 -GSNV--IHRDLKPSNLLI-----NSNCD---LKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 288 M----------APEVIKTS-IFSKASDVWSYGVVLWELLTGE 318
M APEV+ TS +S+A DVWS G +L EL
Sbjct: 179 MVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 93.1 bits (232), Expect = 6e-21
Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 26/207 (12%)
Query: 123 EAIGEGGFGKVYKGIYEK--QEVAIK-VAHPNPDENILENVKQEGKLLWLFDHRNIVSLI 179
+G G +G V I ++ ++VAIK ++ P E + +E LL H N++ L+
Sbjct: 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 180 GVCLQSPKLC------LVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAP 233
V + L LVM + L +++ G K + + Q+ +G+ Y+H A
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFM-QTDLQKIM-GLKFSEEKIQYLVYQMLKGLKYIH-SAG 146
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAW-MAPEV 292
+ +HRDLK N+ + NED + LKI DFGLAR M+ W APEV
Sbjct: 147 V--VHRDLKPGNLAV-----NEDCE---LKILDFGLARHA--DAEMTGYVVTRWYRAPEV 194
Query: 293 IKTS-IFSKASDVWSYGVVLWELLTGE 318
I + +++ D+WS G ++ E+LTG+
Sbjct: 195 ILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm,
phosphorylation, SH3-binding, signaling protein; NMR
{Mus musculus} PDB: 2kro_A
Length = 64
Score = 85.4 bits (212), Expect = 6e-21
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 7/62 (11%)
Query: 35 WRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVS 94
R L+ Y DEL+ R G+I+ ++SK+ +G+ GWW G++ G K G+FP NF
Sbjct: 9 CRTLFPYTGTNEDELTFREGEIIHLISKE---TGEAGWWKGELNG----KEGVFPDNFAV 61
Query: 95 SI 96
I
Sbjct: 62 QI 63
>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding
protein G; sortase, protein ligation, intein, inset,
solubility enhancement; NMR {Mus musculus}
Length = 142
Score = 87.8 bits (217), Expect = 9e-21
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 16/138 (11%)
Query: 35 WRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVS 94
+A YD+ A ELSL+ GDI+++L+K G GWW G+I G ++G FP+N+V
Sbjct: 8 AKARYDFCARDRSELSLKEGDIIKILNKK----GQQGWWRGEIYG----RIGWFPSNYVE 59
Query: 95 SIEDINL-------VSSVINDVKLVEIDYNKLIFGEAIGEGGFGKVYKGIYEKQEVAIKV 147
L SS+ + L EA+ KV+K V +
Sbjct: 60 EDYSEYLPETGGGSGSSMTYKLILNGKTLKGETTTEAVDAATAEKVFKQYANDNGVDGEW 119
Query: 148 AHPNPDENILENVKQEGK 165
+ + + + +
Sbjct: 120 TYDDATK-TFTVTEHSLE 136
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 91.9 bits (229), Expect = 1e-20
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 123 EAIGEGGFGKVYKGIYEK--QEVAIK-VAHPNPDENILENVKQ---EGKLLWLFDHRNIV 176
+ +G GG G V+ + + VAIK + +P ++VK E K++ DH NIV
Sbjct: 17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDP-----QSVKHALREIKIIRRLDHDNIV 71
Query: 177 SLIGVCLQSPKLC--------------LVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIA 222
+ + S +V EY L VL + + + Q+
Sbjct: 72 KVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQGPLLEEHARLFMYQLL 130
Query: 223 EGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAA 282
G+ Y+H +++HRDLK +N+ ++ EDL LKI DFGLAR +
Sbjct: 131 RGLKYIHSA---NVLHRDLKPANLFIN----TEDLV---LKIGDFGLARIMDPHYSHKGH 180
Query: 283 GT-YA---WM-APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
+ W +P ++ + ++KA D+W+ G + E+LTG
Sbjct: 181 LSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG 221
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 73
Score = 84.3 bits (209), Expect = 2e-20
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 35 WRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVS 94
+ALYDY+ DELS G I+ +L+K++ D G+W G+ G ++G+FP+ V
Sbjct: 11 VKALYDYEGQTDDELSFPEGAIIRILNKEN--QDDDGFWEGEFNG----RIGVFPSVLVE 64
Query: 95 SIED 98
+
Sbjct: 65 ELSS 68
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling
protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Length = 69
Score = 83.9 bits (208), Expect = 3e-20
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 7/68 (10%)
Query: 32 PDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPAN 91
D + ++ Y+A DEL+++ GDIV +++KD DVGWW G++ G + G+FP N
Sbjct: 2 SDYCKVIFPYEAQNDDELTIKEGDIVTLINKD---CIDVGWWEGELNG----RRGVFPDN 54
Query: 92 FVSSIEDI 99
FV + +
Sbjct: 55 FVKLLPPL 62
>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 73
Score = 83.5 bits (207), Expect = 3e-20
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 35 WRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVS 94
A Y++ A + ELSLR GD+V + S+ I GD GWW G+ G ++G FP+ +V
Sbjct: 10 AVARYNFAARDMRELSLREGDVVRIYSR---IGGDQGWWKGETNG----RIGWFPSTYVE 62
Query: 95 SIEDINLVSS 104
+ SS
Sbjct: 63 EEGIQSGPSS 72
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces
cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A*
1how_A 2jd5_A
Length = 373
Score = 91.3 bits (227), Expect = 4e-20
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 60/231 (25%)
Query: 125 IGEGGFGKVYKG--IYEKQEVAIKVAHPNP-------DE-NILENVKQEG---------- 164
+G G F V+ + VA+K+ + DE +L+ V
Sbjct: 27 LGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGAN 86
Query: 165 ---KLLWLFDHRNIVSLIGVCLQSPKLCLVME------YA-------RGGPLNRVLAGRK 208
KLL F+H+ + +V E A RG PL V ++
Sbjct: 87 HILKLLDHFNHKG--------PNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYV---KQ 135
Query: 209 IRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFG 268
I + Q+ G++Y+H + +IH D+K NVL+ E+ +KI D G
Sbjct: 136 I--------SKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPEN--LIQIKIADLG 183
Query: 269 LAREVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWELLTGEI 319
A + + ++ T + +PEV+ + + +D+WS +++EL+TG+
Sbjct: 184 NACWYDEH-YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDF 233
>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo
sapiens}
Length = 69
Score = 83.1 bits (206), Expect = 4e-20
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 30 HRPDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFP 89
H L +ALYD A DELS R+GDI+ VL +D+ G GWW + G + GI P
Sbjct: 1 HLNVLAKALYDNVAESPDELSFRKGDIMTVLEQDT--QGLDGWWLCSLHG----RQGIVP 54
Query: 90 ANFVSSIEDI 99
N + + +
Sbjct: 55 GNRLKILVGM 64
>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Mus musculus}
Length = 70
Score = 82.7 bits (205), Expect = 7e-20
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 7/64 (10%)
Query: 35 WRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVS 94
+ ++ Y+A DEL+++ GDIV +++KD DVGWW G++ G + G+FP NFV
Sbjct: 10 CKVIFPYEAQNDDELTIKEGDIVTLINKD---CIDVGWWEGELNG----RRGVFPDNFVK 62
Query: 95 SIED 98
+
Sbjct: 63 LLSG 66
>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 71
Score = 80.8 bits (200), Expect = 3e-19
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
RALYD DEL+ RGDI+ +L + GWW + G + G+ PAN +
Sbjct: 11 RALYDNCPDCSDELAFSRGDILTILEQHV--PESEGWWKCLLHG----RQGLAPANRLQI 64
Query: 96 IED 98
+
Sbjct: 65 LSG 67
>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural
genomics, riken structural genomics/proteomics
initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Length = 93
Score = 81.8 bits (202), Expect = 3e-19
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 35 WRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVS 94
+RALY ++A DE+S GDI++V K G+ GW G +G G FP N+V
Sbjct: 8 YRALYPFEARNHDEMSFNSGDIIQVDEKT---VGEPGWLYGSFQG----NFGWFPCNYVE 60
Query: 95 SIED 98
+
Sbjct: 61 KMPS 64
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor
protein, downregulation, CBL, apoptosis, junction,
cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Length = 73
Score = 80.8 bits (200), Expect = 3e-19
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 31 RPDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPA 90
D + ++ Y+A DEL+++ GDIV +++KD DVGWW G++ G + G+FP
Sbjct: 8 SKDYCKVIFPYEAQNDDELTIKEGDIVTLINKD---CIDVGWWEGELNG----RRGVFPD 60
Query: 91 NFVSSIED 98
NFV +
Sbjct: 61 NFVKLLPP 68
>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus}
SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B
Length = 115
Score = 81.7 bits (201), Expect = 5e-19
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEY------KVGIFP 89
+A +DY A DEL L+ GD+V V+ + D GW G E G+FP
Sbjct: 48 QAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFP 107
Query: 90 ANFVSSIE 97
NF ++
Sbjct: 108 ENFTERVQ 115
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural
genomics CON SGC; 2.05A {Plasmodium berghei} PDB:
3nie_A*
Length = 432
Score = 87.9 bits (218), Expect = 7e-19
Identities = 58/242 (23%), Positives = 96/242 (39%), Gaps = 60/242 (24%)
Query: 123 EAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVKQ---EGKLLWLFDHRNIVS 177
IG G +G VY + + VAIK E++++ K+ E +L I+
Sbjct: 32 HLIGRGSYGYVYLAYDKNTEKNVAIK-KVNRMFEDLID-CKRILREITILNRLKSDYIIR 89
Query: 178 LIGVCLQSPKLC-----LVMEYARGGPLNRVLAGRKIR-PDVLVDWAI-----QIAEGMN 226
L + + L +V+E A L ++ + P L + I + G N
Sbjct: 90 LYDLIIPDDLLKFDELYIVLEIA-DSDLKKL-----FKTPIFLTEEHIKTILYNLLLGEN 143
Query: 227 YLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYA 286
++H ++ I IHRDLK +N LL N+D ++K+ DFGLAR + +
Sbjct: 144 FIH-ESGI--IHRDLKPANCLL-----NQDC---SVKVCDFGLARTINSEKDTNIVNDLE 192
Query: 287 WM------------------------APEVIKTS-IFSKASDVWSYGVVLWELLTGEIPY 321
APE+I ++K+ D+WS G + ELL +
Sbjct: 193 ENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252
Query: 322 KS 323
+
Sbjct: 253 IN 254
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum,
ATP-binding, kinase, nucleoti binding; HET: PTR DRK;
2.65A {Cryptosporidium parvum iowa II}
Length = 383
Score = 87.5 bits (217), Expect = 8e-19
Identities = 51/260 (19%), Positives = 98/260 (37%), Gaps = 78/260 (30%)
Query: 112 VEIDYNKLIFGEAIGEGGFGKVYKGIYEK--QEVAIKVAHPNPDENILENVK---QEGKL 166
Y+ + +G G FG V + + + A+K +L++ + +E +
Sbjct: 5 SSKKYSLG---KTLGTGSFGIVCEVFDIESGKRFALK--------KVLQDPRYKNRELDI 53
Query: 167 LWLFDHRNIVSLIGV-------------------------------CLQSPK-------L 188
+ + DH NI+ L+ L
Sbjct: 54 MKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYL 113
Query: 189 CLVMEYARGGPLNRVLAGRKIRPDVLVDWAI-----QIAEGMNYLHCQAPISLIHRDLKS 243
++MEY L++VL + I Q+ + ++H + HRD+K
Sbjct: 114 NVIMEYV-PDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL---GICHRDIKP 169
Query: 244 SNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYA---WM-APEVIKTSI-F 298
N+L+ + + TLK+ DFG A+++ + A Y + APE++ + +
Sbjct: 170 QNLLV-------NSKDNTLKLCDFGSAKKLIPSEPSVA---YICSRFYRAPELMLGATEY 219
Query: 299 SKASDVWSYGVVLWELLTGE 318
+ + D+WS G V EL+ G+
Sbjct: 220 TPSIDLWSIGCVFGELILGK 239
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural
genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Length = 458
Score = 88.0 bits (218), Expect = 8e-19
Identities = 50/240 (20%), Positives = 94/240 (39%), Gaps = 51/240 (21%)
Query: 123 EAIGEGGFGKVYKGIYEK--QEVAIK-VAHPNPDENILENVKQEGKLLWLFDHRNIVSLI 179
IG G +G V + + + VAIK + D + + +E +L +H ++V ++
Sbjct: 59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVL 118
Query: 180 GVCLQSPKLC-----LVMEYARGGPLNRVLAGRKIRPDVLVDWAI-QIAEGMNYLHCQAP 233
+ + +V+E A ++ ++ + + + G+ Y+H
Sbjct: 119 DIVIPKDVEKFDELYVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA-- 175
Query: 234 ISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWM----- 288
++HRDLK +N L+ N+D +K+ DFGLAR V + ++ +
Sbjct: 176 -GILHRDLKPANCLV-----NQDCS---VKVCDFGLARTVDYPENGNSQLPISPREDDMN 226
Query: 289 ------------------------APEVIKTS-IFSKASDVWSYGVVLWELLTGEIPYKS 323
APE+I +++A DVWS G + ELL +
Sbjct: 227 LVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVA 286
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3
domain/complex, adaptor protein (MONA); 1.5A {Mus
musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A
2d0n_A
Length = 58
Score = 79.1 bits (196), Expect = 1e-18
Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 9/61 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
RALYD++A+ DEL R G++VEVL + WWTG++ K+G+FPAN+V+
Sbjct: 5 RALYDFEALEEDELGFRSGEVVEVLDSS-----NPSWWTGRLHN----KLGLFPANYVAP 55
Query: 96 I 96
+
Sbjct: 56 M 56
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3,
cysteine-rich domain protein, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 68
Score = 78.8 bits (195), Expect = 2e-18
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
ALY + ++L +R GDI+ +L + WW GKI+ ++G FPANFV
Sbjct: 11 VALYKFVPQENEDLEMRPGDIITLLEDS-----NEDWWKGKIQD----RIGFFPANFVQR 61
Query: 96 IED 98
+
Sbjct: 62 LSG 64
>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 85
Score = 79.0 bits (195), Expect = 2e-18
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 7/63 (11%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
AL Y LS RGD++++L + + GW G G + G+FPA+ V
Sbjct: 12 IALRSYITDNCSLLSFHRGDLIKLLPVATL---EPGWQFGSAGG----RSGLFPADIVQP 64
Query: 96 IED 98
Sbjct: 65 AAA 67
>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1
GTPase-activating protein...; GTPase activation,
membrane, metal-binding, SH3 domain; NMR {Homo sapiens}
PDB: 2rqt_A 2rqu_A
Length = 76
Score = 78.9 bits (195), Expect = 2e-18
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
+ +YD A DEL+ G+++ V ++ D WW G IEG+ E + G+FP +FV
Sbjct: 14 KTIYDCQADNDDELTFIEGEVIIVTGEE-----DQEWWIGHIEGQPE-RKGVFPVSFVHI 67
Query: 96 IED 98
+ D
Sbjct: 68 LSD 70
>3u23_A CD2-associated protein; structural genomics, structural genomics
consortium, SGC, BE barrel, adaptor protein, protein
binding; 1.11A {Homo sapiens} PDB: 2krn_A
Length = 65
Score = 78.4 bits (194), Expect = 2e-18
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 9/63 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
+ L++Y DEL L+ GDI+++ + + GWW+G + K+G+FP+NFV
Sbjct: 11 KVLFEYIPQNEDELELKVGDIIDINEEV-----EEGWWSGTLNN----KLGLFPSNFVKE 61
Query: 96 IED 98
+E
Sbjct: 62 LEV 64
>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural
genomics/proteomics initiative, RSGI, structural
genomics, signaling protein; NMR {Homo sapiens} SCOP:
b.34.2.1
Length = 69
Score = 78.5 bits (194), Expect = 2e-18
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 32 PDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPAN 91
+ + ALY Y ++ +L+ G+ + V KD WWTG I + GIFP+N
Sbjct: 8 GEEYIALYPYSSVEPGDLTFTEGEEILVTQKDG------EWWTGSIGD----RSGIFPSN 57
Query: 92 FVSSIED 98
+V +
Sbjct: 58 YVKPKDS 64
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural
genomics/proteomics initiative, RSGI, structural
genomics, endocytosis/exocytosis complex; NMR {Homo
sapiens} SCOP: b.34.2.1
Length = 80
Score = 78.6 bits (194), Expect = 3e-18
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 31 RPDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIE-YKVGIFP 89
++ + Y A G ++LSL G ++ +L K+ GWW G+++ + + + G FP
Sbjct: 6 SGEIAQVTSAYVASGSEQLSLAPGQLILILKKN-----TSGWWQGELQARGKKRQKGWFP 60
Query: 90 ANFVSSIED 98
A+ V +
Sbjct: 61 ASHVKLLGP 69
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus
musculus}
Length = 60
Score = 78.0 bits (193), Expect = 3e-18
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 9/61 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
+ALY YDA DELS DI++++ +D GWWTG++ G K G+FP N+V+
Sbjct: 9 KALYAYDAQDTDELSFNANDIIDIIKED-----PSGWWTGRLRG----KQGLFPNNYVTK 59
Query: 96 I 96
I
Sbjct: 60 I 60
>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Mus musculus}
Length = 81
Score = 78.2 bits (193), Expect = 3e-18
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 7/63 (11%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
R LYDYDA ELSL +++ V S D W G+ + G P ++
Sbjct: 21 RVLYDYDAANSTELSLLADEVITVFSVVGM---DSDWLMGERGN----QKGKVPITYLEL 73
Query: 96 IED 98
+
Sbjct: 74 LNS 76
>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK,
structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Mus
musculus}
Length = 68
Score = 77.7 bits (192), Expect = 4e-18
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 9/63 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
+ + Y DEL L+ GDI+EV+ + + GWW G + G K G+FP+NF+
Sbjct: 11 QVAFSYLPQNDDELELKVGDIIEVVGEV-----EEGWWEGVLNG----KTGMFPSNFIKE 61
Query: 96 IED 98
+
Sbjct: 62 LSG 64
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2
domain, SH3 zinc-finger, SH3- binding, UBL conjugation
pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A
2krm_A
Length = 62
Score = 77.2 bits (191), Expect = 4e-18
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 8/64 (12%)
Query: 35 WRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVS 94
+ YDYDA+ DEL++R G+I+ + K + GW G++ G + G+FP NFV
Sbjct: 4 YIVEYDYDAVHDDELTIRVGEIIRNVKK----LQEEGWLEGELNG----RRGMFPDNFVK 55
Query: 95 SIED 98
I+
Sbjct: 56 EIKR 59
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor
protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Length = 58
Score = 77.2 bits (191), Expect = 4e-18
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 9/62 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
+DY A DEL++ G+I+ + K+ D GWW G+I G + G+FP NFV
Sbjct: 5 IVEFDYQAQHDDELTISVGEIITNIRKE-----DGGWWEGQING----RRGLFPDNFVRE 55
Query: 96 IE 97
I+
Sbjct: 56 IK 57
>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3
domain, PEST phosphatase-interacting protein 1, CD2-
binding protein 1; NMR {Homo sapiens}
Length = 69
Score = 77.7 bits (192), Expect = 4e-18
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 9/63 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
RALYDY A DEL L GDI+EV+ + + GWWT + G + G P +++
Sbjct: 12 RALYDYTAQNPDELDLSAGDILEVILEG-----EDGWWTVERNG----QRGFVPGSYLEK 62
Query: 96 IED 98
+
Sbjct: 63 LSG 65
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 85.1 bits (211), Expect = 4e-18
Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 54/231 (23%)
Query: 123 EAIGEGGFGKVYKGIYEK--QEVAIK-VAHPNPDENILENVKQEGKLLWLF-DHRNIVSL 178
+ +G+G +G V+K I + + VA+K + + + +E +L H NIV+L
Sbjct: 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNL 74
Query: 179 IGVCLQSPK---LCLVMEYARGGPLNRVLAGRKIRPDVLVDWAI-----QIAEGMNYLHC 230
+ V L++ + LV +Y L+ V IR ++L Q+ + + YLH
Sbjct: 75 LNV-LRADNDRDVYLVFDYM-ETDLHAV-----IRANILEPVHKQYVVYQLIKVIKYLH- 126
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWM-- 288
+ +HRD+K SN+LL N + +K+ DFGL+R ++ +
Sbjct: 127 SGGL--LHRDMKPSNILL-----NAECH---VKVADFGLSRSFVNIRRVTNNIPLSINEN 176
Query: 289 ---------------------APEVIKTSI-FSKASDVWSYGVVLWELLTG 317
APE++ S ++K D+WS G +L E+L G
Sbjct: 177 TENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG 227
>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 80
Score = 77.8 bits (192), Expect = 5e-18
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 32 PDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPAN 91
P ALY ++ +L+ + GD + V+SK + WW GK+ G + GIFPAN
Sbjct: 17 PIEVTALYSFEGQQPGDLNFQAGDRITVISKTDS---HFDWWEGKLRG----QTGIFPAN 69
Query: 92 FVSSIED 98
+V+
Sbjct: 70 YVTMNSG 76
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal
transducing adaptor molecule, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 88
Score = 78.2 bits (193), Expect = 5e-18
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 9/63 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
RALYD++A+ +EL+ + G+I+ VL D WW G+ +G+FP+NFV++
Sbjct: 21 RALYDFEAVEDNELTFKHGEIIIVLDDS-----DANWWKGENHR----GIGLFPSNFVTT 71
Query: 96 IED 98
+
Sbjct: 72 NLN 74
>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR
{Homo sapiens}
Length = 65
Score = 77.3 bits (191), Expect = 5e-18
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 9/63 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
+ L++Y DEL L+ GDI+++ + + GWW+G + K+G+FP+NFV
Sbjct: 5 KVLFEYIPQNEDELELKVGDIIDINEEV-----EEGWWSGTLNN----KLGLFPSNFVKE 55
Query: 96 IED 98
+E
Sbjct: 56 LEL 58
>2vwf_A Growth factor receptor-bound protein 2; polymorphism,
phosphoprotein, golgi apparatus, alternative splicing,
HOST-virus interaction, SH3C, signaling; 1.58A {Homo
sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Length = 58
Score = 76.8 bits (190), Expect = 5e-18
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 9/61 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
+AL+D+D EL RRGD + V+ D WW G G + G+FP N+V++
Sbjct: 6 QALFDFDPQEDGELGFRRGDFIHVMDNS-----DPNWWKGACHG----QTGMFPRNYVTA 56
Query: 96 I 96
+
Sbjct: 57 V 57
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2;
KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase,
structural genomics consortium; HET: SEP PTR IRB; 2.28A
{Homo sapiens} PDB: 3k2l_A*
Length = 429
Score = 85.2 bits (211), Expect = 6e-18
Identities = 59/232 (25%), Positives = 91/232 (39%), Gaps = 72/232 (31%)
Query: 123 EAIGEGGFGKVYKGI--YEKQEVAIKVAHPNPD-------E-NILENVKQEG-------- 164
+ IG+G FG+V K Q VA+K+ E ILE+++++
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 165 KLLWLFDHRNIVSLIGVCLQSPKLCLVMEY-------------ARGGPLNRVLAGRKIRP 211
+L F RN +C+ E +G L V RK
Sbjct: 163 HMLENFTFRN------------HICMTFELLSMNLYELIKKNKFQGFSLPLV---RKF-- 205
Query: 212 DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR 271
A I + ++ LH +IH DLK N+LL + + +K+ DFG +
Sbjct: 206 ------AHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSG------IKVIDFGSSC 250
Query: 272 EVYKTTHMSAAGTYA----WMAPEVIKTSIFSKASDVWSYGVVLWELLTGEI 319
++ + TY + APEVI + + D+WS G +L ELLTG
Sbjct: 251 YEHQRVY-----TYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYP 297
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif)
2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early
endosome, signaling protein/signaling protein complex;
1.70A {Mus musculus} SCOP: b.34.2.1
Length = 62
Score = 76.9 bits (190), Expect = 6e-18
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 9/62 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
RALYD++A+ +EL+ + G+++ VL D WW G+ G+FP+NFV++
Sbjct: 9 RALYDFEAVEDNELTFKHGELITVLDDS-----DANWWQGENHR----GTGLFPSNFVTT 59
Query: 96 IE 97
Sbjct: 60 DL 61
>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Mus musculus}
Length = 69
Score = 76.9 bits (190), Expect = 7e-18
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
+ALYDY A DEL+ RG ++ +SK+ GWW G +I+ FP+N+V
Sbjct: 11 KALYDYKAKRSDELTFCRGALIHNVSKE-----PGGWWKGDYGTRIQ---QYFPSNYVED 62
Query: 96 IED 98
I
Sbjct: 63 ISG 65
>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 79
Score = 77.4 bits (191), Expect = 7e-18
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 9/63 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
+ALY + A DEL+L +GDIV + K + GWW G + G K G FPA +V
Sbjct: 11 KALYSFQARQDDELNLEKGDIVIIHEKK-----EEGWWFGSLNG----KKGHFPAAYVEE 61
Query: 96 IED 98
+
Sbjct: 62 LPS 64
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces
cerevisiae} PDB: 1ynz_A
Length = 58
Score = 76.4 bits (189), Expect = 8e-18
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFV 93
ALY +D +L L+ GD V++L K W+ G G + GIFPAN+V
Sbjct: 6 EALYQFDPQQDGDLGLKPGDKVQLLEKL-----SPEWYKGSCNG----RTGIFPANYV 54
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3
domain, sturctural genomics, structural genomics; 1.39A
{Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A
2a08_A
Length = 60
Score = 76.4 bits (189), Expect = 8e-18
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 7/61 (11%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
ALY + +L R+GD++ +L K + WWTG++ G + GIFPAN+V
Sbjct: 7 VALYSFAGEESGDLPFRKGDVITILKKSDS---QNDWWTGRVNG----REGIFPANYVEL 59
Query: 96 I 96
+
Sbjct: 60 V 60
>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural
genomics/proteomics initiative, RSGI, structural
genomics; NMR {Homo sapiens} SCOP: b.34.2.1
Length = 98
Score = 77.8 bits (192), Expect = 8e-18
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
A+YDY A DELS +G ++ V++KD D WW G+I G G+FP+N+V
Sbjct: 38 IAMYDYAANNEDELSFSKGQLINVMNKD-----DPDWWQGEING----VTGLFPSNYVKM 88
Query: 96 IEDINLVSS 104
D + SS
Sbjct: 89 TTDSSGPSS 97
>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine
kinase, signal transduction, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 88
Score = 77.5 bits (191), Expect = 8e-18
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 9/64 (14%)
Query: 35 WRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVS 94
++Y A DELSL +G V V+ K GWW G G +VG FP+N+V+
Sbjct: 20 AYVKFNYMAEREDELSLIKGTKVIVMEKC-----SDGWWRGSYNG----QVGWFPSNYVT 70
Query: 95 SIED 98
D
Sbjct: 71 EEGD 74
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein;
2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB:
2sem_A 3sem_A 1k76_A 1kfz_A
Length = 58
Score = 76.0 bits (188), Expect = 1e-17
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 9/58 (15%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFV 93
+AL+D++ EL+ +RGD++ +++KD D WW G++ + GIFP+N+V
Sbjct: 6 QALFDFNPQESGELAFKRGDVITLINKD-----DPNWWEGQLNN----RRGIFPSNYV 54
>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Mus musculus}
Length = 78
Score = 77.0 bits (190), Expect = 1e-17
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 9/63 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
+AL D++ DEL R+ DI+ ++S+ D W G++ G G FPA FV
Sbjct: 11 KALLDFERHDDDELGFRKNDIITIISQK-----DEHCWVGELNG----LRGWFPAKFVEV 61
Query: 96 IED 98
+++
Sbjct: 62 LDE 64
>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42
guanine nucleotide exchange factor (GEF) 9, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 81
Score = 76.7 bits (189), Expect = 1e-17
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 9/63 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
A++D+ + EL+ + GD+++VL + WW G+I+ + G FPA+FV
Sbjct: 14 EAVWDHVTMANRELAFKAGDVIKVLDAS-----NKDWWWGQIDD----EEGWFPASFVRL 64
Query: 96 IED 98
+
Sbjct: 65 WVN 67
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human
osteoclast stimulating factor 1, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 68
Score = 76.5 bits (189), Expect = 1e-17
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 9/63 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
RALY ++ DEL GDI+ + D WW G +G + G+ P+N+V+
Sbjct: 11 RALYTFEPRTPDELYFEEGDIIYITDMS-----DTNWWKGTSKG----RTGLIPSNYVAE 61
Query: 96 IED 98
Sbjct: 62 QSG 64
>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 71
Score = 76.6 bits (189), Expect = 1e-17
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
Query: 35 WRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVS 94
+ + Y + DE+ +G VEV+ K+ GWW + G K G PA+++
Sbjct: 11 YVTVQPYTSQSKDEIGFEKGVTVEVIRKN-----LEGWWYIRYLG----KEGWAPASYLK 61
Query: 95 SIED 98
+D
Sbjct: 62 KAKD 65
>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces
cerevisiae}
Length = 54
Score = 76.0 bits (188), Expect = 1e-17
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 8/58 (13%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFV 93
A+Y Y+A G DE+S+ GDI+ V+ D GW G+ +G G+FP ++
Sbjct: 4 EAIYAYEAQGDDEISIDPGDIITVIRGDD----GSGWTYGECDG----LKGLFPTSYC 53
>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics,
SH3 domain, riken structural genomics/proteomics
initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Length = 76
Score = 76.6 bits (189), Expect = 1e-17
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 9/63 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
+A +++ DELS+ +GDI+ V + + GWW G + G + G FP+N+V
Sbjct: 14 KARFNFKQTNEDELSVCKGDIIYVTRVE-----EGGWWEGTLNG----RTGWFPSNYVRE 64
Query: 96 IED 98
I+
Sbjct: 65 IKS 67
>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR
{Homo sapiens}
Length = 92
Score = 77.1 bits (190), Expect = 1e-17
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 9/63 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
+ + Y DEL L+ GDI+EV+ + + GWW G + G K G+FP+NF+
Sbjct: 22 QVAFSYLPQNDDELELKVGDIIEVVGEV-----EEGWWEGVLNG----KTGMFPSNFIKE 72
Query: 96 IED 98
+
Sbjct: 73 LSG 75
>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 68
Score = 76.1 bits (188), Expect = 1e-17
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 9/58 (15%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFV 93
R L+ + +EL + G+IV VL K + W T G + G+ P N++
Sbjct: 11 RVLFGFVPETKEELQVMPGNIVFVLKKG-----NDNWATVMFNG----QKGLVPCNYL 59
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins,
CIN85, PIX/COOL, protein-protein interaction, X-RAY,
endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Length = 64
Score = 76.1 bits (188), Expect = 1e-17
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
RA +++ DELS +GD++ V + + GWW G G + G FP+N+V
Sbjct: 10 RAKFNFQQTNEDELSFSKGDVIHVTRVE-----EGGWWEGTHNG----RTGWFPSNYVRE 60
Query: 96 IE 97
I+
Sbjct: 61 IK 62
>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein,
phosphorylation, SH3 domain, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 78
Score = 76.6 bits (189), Expect = 1e-17
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 9/63 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
A+YDY DELS + G I+ V+ K+ D GW+ G + G G+FP N+V S
Sbjct: 21 VAIYDYTKDKEDELSFQEGAIIYVIKKN-----DDGWYEGVMNG----VTGLFPGNYVES 71
Query: 96 IED 98
I
Sbjct: 72 ISG 74
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2,
protei binding, chronic myeloid leukemia; 1.53A {Homo
sapiens}
Length = 69
Score = 75.8 bits (187), Expect = 2e-17
Identities = 27/65 (41%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
ALYDY A DEL++ RGDI+ V KD + WW G I + G FPAN V+S
Sbjct: 10 VALYDYTANRSDELTIHRGDIIRVFFKD-----NEDWWYGSIGKG---QEGYFPANHVAS 61
Query: 96 IEDIN 100
Sbjct: 62 ETLYQ 66
>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418
protein, SH3MD1, SH3 multiple domains 1, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 70
Score = 75.8 bits (187), Expect = 2e-17
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 9/67 (13%)
Query: 32 PDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPAN 91
+ + + +Y ELSL+ G++V+V+ K+ + GWW + G PA
Sbjct: 8 LEQYVVVSNYKKQENSELSLQAGEVVDVIEKN-----ESGWWFVSTSE----EQGWVPAT 58
Query: 92 FVSSIED 98
++ +
Sbjct: 59 YLEAQNS 65
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide
interaction, signaling protein; HET: NCO; 0.92A {Rattus
norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Length = 59
Score = 75.3 bits (186), Expect = 2e-17
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 9/61 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
RA +++ DELS +GD++ V + + GWW G G + G FP+N+V
Sbjct: 8 RAKFNFQQTNEDELSFSKGDVIHVTRVE-----EGGWWEGTHNG----RTGWFPSNYVRE 58
Query: 96 I 96
I
Sbjct: 59 I 59
>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
Length = 79
Score = 76.2 bits (188), Expect = 2e-17
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
ALYDY A G DE+S DI+ + D GWW G +G + G+FPAN+V
Sbjct: 21 VALYDYQAAGDDEISFDPDDIITNIEMI-----DDGWWRGVCKG----RYGLFPANYVEL 71
Query: 96 IED 98
+
Sbjct: 72 RQS 74
>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus
musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A
4gbq_A
Length = 74
Score = 75.8 bits (187), Expect = 2e-17
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
A YD+ A DELS +RGDI++VL+++ D W+ ++ G K G P N++
Sbjct: 13 IAKYDFKATADDELSFKRGDILKVLNEEC----DQNWYKAELNG----KDGFIPKNYIEM 64
Query: 96 IED 98
Sbjct: 65 KPH 67
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A
{Acanthamoeba} PDB: 2drk_A
Length = 58
Score = 75.3 bits (186), Expect = 2e-17
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 9/61 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
+ALYDYDA DEL+ + GD + V KD GWW G++ G K G PAN+V
Sbjct: 7 KALYDYDAQTGDELTFKEGDTIIVHQKD-----PAGWWEGELNG----KRGWVPANYVQD 57
Query: 96 I 96
I
Sbjct: 58 I 58
>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural
genomics, riken structural genomics/proteomics
initiative, RSGI, unknown function; NMR {Homo sapiens}
SCOP: b.34.2.1
Length = 79
Score = 76.3 bits (188), Expect = 2e-17
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 32 PDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPAN 91
++ A+Y + A +ELS+ +++L +G+ WW ++ G K G P+N
Sbjct: 13 NQVYFAVYTFKARNPNELSVSANQKLKILEFKDV-TGNTEWWLAEVNG----KKGYVPSN 67
Query: 92 FVSSIE 97
++ E
Sbjct: 68 YIRKTE 73
>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
Length = 68
Score = 75.8 bits (187), Expect = 2e-17
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 9/63 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
A+ DY A +LS RG+ + +L + WW G+ G G PAN V
Sbjct: 11 VAIADYAATDETQLSFLRGEKILILRQT-----TADWWWGERAG----CCGYIPANHVGK 61
Query: 96 IED 98
Sbjct: 62 HSG 64
>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin,
C-CBL-associated protein, CAP, SH3 domain protein 5
SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens}
PDB: 2dlm_A
Length = 68
Score = 75.3 bits (186), Expect = 2e-17
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 9/63 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
RA +D+ A L EL L++GDIV + + D W+ G+ G +VGIFP ++
Sbjct: 11 RAKFDFKAQTLKELPLQKGDIVYIYKQI-----DQNWYEGEHHG----RVGIFPRTYIEL 61
Query: 96 IED 98
+
Sbjct: 62 LSG 64
>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein;
1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A
1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A
1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A
...
Length = 62
Score = 75.0 bits (185), Expect = 2e-17
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 9/62 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
LYDY EL++++GDI+ +L+ + WW ++ G + G PA ++
Sbjct: 10 LVLYDYQEKSPRELTVKKGDILTLLNST-----NKDWWKIEVNG----RQGFVPAAYLKK 60
Query: 96 IE 97
++
Sbjct: 61 LD 62
>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein,
membrane, nuclear protein, phosphorylation,
polymorphism, transport, structural genomics; NMR {Homo
sapiens}
Length = 70
Score = 75.4 bits (186), Expect = 3e-17
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
A ++++ E+S R+G+ + +L + D W+ G+I G + GIFP +V
Sbjct: 11 IAKFNFNGDTQVEMSFRKGERITLLRQV-----DENWYEGRIPG--TSRQGIFPITYVDV 63
Query: 96 IED 98
I
Sbjct: 64 ISG 66
>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural
protein; 1.70A {Rattus norvegicus}
Length = 73
Score = 75.4 bits (186), Expect = 3e-17
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 9/64 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
ALYDY E+++++GDI+ +L+ + WW ++ + G PA +V
Sbjct: 9 LALYDYQEKSPREVTMKKGDILTLLNST-----NKDWWKVEVND----RQGFVPAAYVKK 59
Query: 96 IEDI 99
++
Sbjct: 60 LDPA 63
>2l0a_A STAM-1, signal transducing adapter molecule 1; structural
genomics, northeast structural genomics consortiu
PSI-2, protein structure initiative; NMR {Homo sapiens}
Length = 72
Score = 75.0 bits (185), Expect = 3e-17
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 9/58 (15%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFV 93
RA+YD++A +EL+ + G+I+ VL D WW G+ +G+FP+NFV
Sbjct: 21 RAIYDFEAAEDNELTFKAGEIITVLDDS-----DPNWWKGETHQ----GIGLFPSNFV 69
>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein,
structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Homo
sapiens} SCOP: b.34.2.1
Length = 72
Score = 75.0 bits (185), Expect = 3e-17
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 8/63 (12%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
+ALY A ELS G + + + S + GW G + G K G+ P N+V
Sbjct: 14 KALYACKAEHDSELSFTAGTVFDNVHP----SQEPGWLEGTLNG----KTGLIPENYVEF 65
Query: 96 IED 98
+
Sbjct: 66 LSG 68
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate
head cDNA, riken FULL-length enriched library,
clone:4831401O22, structural genomics; NMR {Mus
musculus}
Length = 68
Score = 74.9 bits (185), Expect = 4e-17
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 9/63 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
+AL +Y +L +GD++ + + D W+ G+I G GIFPA+ V
Sbjct: 11 KALCNYRGKNPGDLKFNKGDVILLRRQL-----DENWYQGEING----VSGIFPASSVEV 61
Query: 96 IED 98
I
Sbjct: 62 ISG 64
>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural
genomics/proteomics initiative, RSGI, structural
genomics, endocytosis/exocytosis complex; NMR {Homo
sapiens} SCOP: b.34.2.1
Length = 74
Score = 75.1 bits (185), Expect = 4e-17
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 10/63 (15%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
+AL + A + L+ + DI+ VL + WW G++ G G FP ++V
Sbjct: 14 QALCSWTAKKDNHLNFSKHDIITVLEQQE------NWWFGEVHG----GRGWFPKSYVKI 63
Query: 96 IED 98
I
Sbjct: 64 IPG 66
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex,
helix-turn-helix, hormone/growth factor complex; NMR
{Homo sapiens} SCOP: b.34.2.1
Length = 62
Score = 74.5 bits (184), Expect = 4e-17
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFV 93
AL+ Y+A ++L + GDI+ VLSK + W G+ +G KVGIFP FV
Sbjct: 9 EALFSYEATQPEDLEFQEGDIILVLSKV-----NEEWLEGESKG----KVGIFPKVFV 57
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel,
endosome, L binding, membrane, phosphoprotein,
proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Length = 73
Score = 75.0 bits (185), Expect = 4e-17
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 9/64 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
+ALYD++ EL R GD++ + ++ D W+ G + G + G FP ++V
Sbjct: 17 KALYDFEPENDGELGFREGDLITLTNQI-----DENWYEGMLHG----QSGFFPLSYVQV 67
Query: 96 IEDI 99
+ +
Sbjct: 68 LVPL 71
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural
protein; 1.75A {Gallus gallus}
Length = 80
Score = 75.1 bits (185), Expect = 4e-17
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 9/64 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
ALYDY E+++++GDI+ +L+ + WW ++ + G PA +V
Sbjct: 6 LALYDYQEKSPREVTMKKGDILTLLNST-----NKDWWKVEVND----RQGFVPAAYVKK 56
Query: 96 IEDI 99
++
Sbjct: 57 LDPA 60
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein;
1.07A {Homo sapiens}
Length = 58
Score = 74.1 bits (183), Expect = 5e-17
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 9/58 (15%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFV 93
RALY ++ DEL GDI+ + D WW G +G + G+ P+N+V
Sbjct: 7 RALYTFEPRTPDELYFEEGDIIYITDMS-----DTNWWKGTSKG----RTGLIPSNYV 55
>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13,
protein-protein interaction, structural genomics; NMR
{Mus musculus}
Length = 93
Score = 75.2 bits (185), Expect = 5e-17
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
RA YD+ A+ +E+S R GD++ + K+ GW ++G+ G+ PAN+V
Sbjct: 21 RAEYDFVAVSDEEISFRAGDMLNLALKEQQ-PKVRGWLLASLDGQ---TTGLIPANYVKI 76
Query: 96 IEDIN 100
+
Sbjct: 77 LGKRR 81
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure,
signaling protein; NMR {Homo sapiens}
Length = 68
Score = 74.2 bits (183), Expect = 5e-17
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 9/64 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
R LYD++ EL + GDI+ + ++ D W+ G I G + G FP N+V
Sbjct: 7 RGLYDFEPENQGELGFKEGDIITLTNQI-----DENWYEGMIHG----ESGFFPINYVEV 57
Query: 96 IEDI 99
I +
Sbjct: 58 IVPL 61
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction,
hydrolase, protein binding; 1.65A {Mus musculus} PDB:
2d1x_A
Length = 65
Score = 74.2 bits (183), Expect = 6e-17
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
ALYDY A G DE+S DI+ + D GWW G +G + G+FPAN+V
Sbjct: 13 IALYDYQAAGDDEISFDPDDIITNIEMI-----DDGWWRGVCKG----RYGLFPANYVEL 63
Query: 96 IE 97
+
Sbjct: 64 RQ 65
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma
1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus}
PDB: 1ywp_A 1ywo_A
Length = 61
Score = 74.2 bits (183), Expect = 6e-17
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
+AL+DY A DEL+ + I++ + K D GWW G GK + FP+N+V
Sbjct: 7 KALFDYKAQREDELTFTKSAIIQNVEKQ-----DGGWWRGDYGGKKQ---LWFPSNYVEE 58
Query: 96 IED 98
+ +
Sbjct: 59 MIN 61
>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain
protein 2A, endophilin 1, EEN-B1, structural genomics,
NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A
Length = 73
Score = 74.2 bits (183), Expect = 6e-17
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
RALYD++ EL + GDI+ + ++ D W+ G + G G FP N+V
Sbjct: 11 RALYDFEPENEGELGFKEGDIITLTNQI-----DENWYEGMLHG----HSGFFPINYVEI 61
Query: 96 IED 98
+
Sbjct: 62 LVA 64
>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
Length = 80
Score = 74.4 bits (183), Expect = 8e-17
Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 9/67 (13%)
Query: 32 PDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPAN 91
+ Y + E+S G V+VL K + GWW + G P++
Sbjct: 8 ATSYMTCSAYQKVQDSEISFPAGVEVQVLEKQ-----ESGWWYVRFGE----LEGWAPSH 58
Query: 92 FVSSIED 98
++ E+
Sbjct: 59 YLVLDEN 65
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural
protein; NMR {Dictyostelium discoideum}
Length = 80
Score = 74.3 bits (183), Expect = 8e-17
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
RAL DY+ L +R DI+ + KD + W+ G++ G K G FP + V
Sbjct: 14 RALKDYNVSDTSLLPFKRNDIITITFKDQ----ENKWFMGQLNG----KEGSFPVDHVEI 65
Query: 96 IED 98
+
Sbjct: 66 LLS 68
>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 76
Score = 73.9 bits (182), Expect = 9e-17
Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 9/64 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
A + Y ELS RRGD++ + + WW G+ G G+ P +++
Sbjct: 14 VACFAYTGRTAQELSFRRGDVLRLHERA-----SSDWWRGEHNG----MRGLIPHKYITL 64
Query: 96 IEDI 99
Sbjct: 65 PAGT 68
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Length = 65
Score = 73.4 bits (181), Expect = 9e-17
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 9/62 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
R +D+ A EL+L++GDIV + + D W G+ G ++GIFPAN+V
Sbjct: 5 RLKFDFQAQSPKELTLQKGDIVYIHKEV-----DKNWLEGEHHG----RLGIFPANYVEV 55
Query: 96 IE 97
+
Sbjct: 56 LP 57
>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo
sapiens}
Length = 79
Score = 73.9 bits (182), Expect = 1e-16
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 13/80 (16%)
Query: 24 NHNRRNHRPDLW----RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEG 79
+H+ +H + AL+D+ EL+ + GD++ +LS+ + W G + G
Sbjct: 6 HHHHHHHMDRMAAPRAEALFDFTGNSKLELNFKAGDVIFLLSRI-----NKDWLEGTVRG 60
Query: 80 KIEYKVGIFPANFVSSIEDI 99
GIFP +FV ++D
Sbjct: 61 ----ATGIFPLSFVKILKDF 76
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3
domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Length = 60
Score = 73.3 bits (181), Expect = 1e-16
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 9/62 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
AL+D+ EL+ + GD++ +LS+ + W G + G GIFP +FV
Sbjct: 8 EALFDFTGNSKLELNFKAGDVIFLLSRI-----NKDWLEGTVRG----ATGIFPLSFVKI 58
Query: 96 IE 97
++
Sbjct: 59 LK 60
>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13;
compact beta-barrel of five anti-parrallel beta-strands;
2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB:
1n5z_A
Length = 92
Score = 74.1 bits (182), Expect = 1e-16
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 36 RALYDYDAIGLD-ELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVS 94
RALYD+ + E++L++GD++ +LSK + D WW + + +G P N++
Sbjct: 18 RALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNG---NIGYIPYNYIE 74
Query: 95 SIEDINLVSSVINDVK 110
I+ + V ++ +
Sbjct: 75 IIKRRKKIEHVDDETR 90
>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase;
NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A
Length = 71
Score = 73.5 bits (181), Expect = 1e-16
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
+AL+DY A DEL+ + I++ + K + GWW G GK K FP+N+V
Sbjct: 10 KALFDYKAQREDELTFIKSAIIQNVEKQ-----EGGWWRGDYGGK---KQLWFPSNYVEE 61
Query: 96 IED 98
+ +
Sbjct: 62 MVN 64
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A;
serine/threonine-protein kinase, minibrain homolog,
nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A
{Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Length = 382
Score = 80.5 bits (199), Expect = 1e-16
Identities = 62/232 (26%), Positives = 90/232 (38%), Gaps = 70/232 (30%)
Query: 123 EAIGEGGFGKVYKGI--YEKQEVAIKVAHPNPD-------E-NILENVKQEG-------- 164
IG+G FG+V K E++ VAIK+ E +LE + +
Sbjct: 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIV 119
Query: 165 KLLWLFDHRNIVSLIGVCLQSPKLCLVMEY-------------ARGGPLNRVLAGRKIRP 211
L F RN LCLV E RG LN RK
Sbjct: 120 HLKRHFMFRN------------HLCLVFEMLSYNLYDLLRNTNFRGVSLNLT---RKF-- 162
Query: 212 DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR 271
A Q+ + +L +S+IH DLK N+LL P + +KI DFG +
Sbjct: 163 ------AQQMCTALLFLA-TPELSIIHCDLKPENILLCNPKRSA------IKIVDFGSSC 209
Query: 272 EVYKTTHMSAAGTYA----WMAPEVIKTSIFSKASDVWSYGVVLWELLTGEI 319
++ + + Y + +PEV+ + A D+WS G +L E+ TGE
Sbjct: 210 QLGQRIY-----QYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEP 256
>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P,
import machine, SH3 domain, protein transport; NMR
{Saccharomyces cerevisiae} SCOP: b.34.2.1
Length = 69
Score = 73.2 bits (180), Expect = 1e-16
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 28 RNHRPDLWRALYDYDAIGLD-ELSLRRGDIVEVLSKDSAISGDVGWWTGKI-EGKIEYKV 85
+H RALYD+ + E++L++GD++ +LSK + D WW + G +
Sbjct: 3 HHHHHHFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNG----NI 58
Query: 86 GIFPANFVSSI 96
G P N++ I
Sbjct: 59 GYIPYNYIEII 69
>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel
beta sheets, structural protein; 2.30A {Gallus gallus}
SCOP: b.34.2.1
Length = 83
Score = 73.6 bits (181), Expect = 2e-16
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 9/64 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
ALYDY E+++++GDI+ +L+ + WW ++ + G PA +V
Sbjct: 21 LALYDYQEKSPREVTMKKGDILTLLNST-----NKDWWKVEVND----RQGFVPAAYVKK 71
Query: 96 IEDI 99
+
Sbjct: 72 LAAA 75
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding,
cell adhesion, cytoskeleton, LIPO magnesium, manganese,
metal-binding, myristate; 1.40A {Homo sapiens} PDB:
3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C*
2o88_A 1bbz_A 1awo_A
Length = 63
Score = 72.6 bits (179), Expect = 2e-16
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 32 PDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPAN 91
P+L+ ALYD+ A G + LS+ +G+ + VL + + W + + G P+
Sbjct: 5 PNLFVALYDFVASGDNTLSITKGEKLRVLGYNH----NGEWCEAQTKN----GQGWVPSA 56
Query: 92 FVSSIE 97
+++ +
Sbjct: 57 YITPVN 62
>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain,
formin-binding protein 2, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 72
Score = 72.7 bits (179), Expect = 3e-16
Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 9/63 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
A +DY ELS ++G + + + WW G+ G G+ P ++
Sbjct: 13 IAKFDYVGRTARELSFKKGASLLLYQRA-----SDDWWEGRHNG----IDGLIPHQYIVV 63
Query: 96 IED 98
+
Sbjct: 64 QDT 66
>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring
finger 2 containing protein, NPPSFA; NMR {Mus musculus}
Length = 70
Score = 72.2 bits (178), Expect = 3e-16
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 32 PDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPAN 91
+++ AL+ Y A +EL L++G+ + VL K GW G + GIFP++
Sbjct: 7 GNMFVALHTYSAHRPEELDLQKGEGIRVLGKY-----QDGWLKGLSLLT--GRTGIFPSD 59
Query: 92 FVSSIEDI 99
+V +
Sbjct: 60 YVIPVSGP 67
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel,
transferase; HET: PG4; 1.76A {Homo sapiens} PDB: 3h0i_A
3h0f_A*
Length = 73
Score = 72.3 bits (178), Expect = 4e-16
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 31 RPDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPA 90
L+ ALYDY+AI D+LS +G+ ++L+ + WW + + G P+
Sbjct: 14 GVTLFVALYDYEAITEDDLSFHKGEKFQILNSS-----EGDWWEARSLTT--GETGYIPS 66
Query: 91 NFVSSIE 97
N+V+ ++
Sbjct: 67 NYVAPVD 73
>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens}
Length = 70
Score = 71.9 bits (177), Expect = 4e-16
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 35 WRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVS 94
+RA+Y Y DEL LR GD V+V+ + D GW+ G K G FP N+V+
Sbjct: 10 YRAMYQYRPQNEDELELREGDRVDVMQQC-----DDGWFVGVSRRT--QKFGTFPGNYVA 62
Query: 95 SIED 98
+
Sbjct: 63 PVSG 66
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB:
2o31_A 2o9v_A 2o2w_A
Length = 67
Score = 71.9 bits (177), Expect = 4e-16
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
A ++++ E+S R+G+ + +L + D W+ G+I G + GIFP +V
Sbjct: 10 IAKFNFNGDTQVEMSFRKGERITLLRQV-----DENWYEGRIPG--TSRQGIFPITYVDV 62
Query: 96 IED 98
I+
Sbjct: 63 IKR 65
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors,
peptoids, protein-protein recognition, proline-rich
motifs, signal transduction; 2.50A {Mus musculus} SCOP:
b.34.2.1
Length = 65
Score = 71.9 bits (177), Expect = 4e-16
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKI-EGKIEYKVGIFPANFVS 94
RAL+D++ ++L ++GDI+ + K + WW + EG K G+ P +V
Sbjct: 7 RALFDFNGNDEEDLPFKKGDILRIRDKP-----EEQWWNAEDSEG----KRGMIPVPYVE 57
Query: 95 SIEDIN 100
+
Sbjct: 58 KYHHHH 63
>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A
{Saccharomyces cerevisiae}
Length = 59
Score = 71.1 bits (175), Expect = 6e-16
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
ALYD++ +EL L GDIV + K GW E + K G+ P FVS
Sbjct: 5 VALYDFEPENDNELRLAEGDIVFISYKH-----GQGWLVA--ENESGSKTGLVPEEFVSY 57
Query: 96 IE 97
I+
Sbjct: 58 IQ 59
>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein;
NMR {Saccharomyces cerevisiae}
Length = 73
Score = 71.6 bits (176), Expect = 6e-16
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
ALYD++ +EL L GDIV + K GW E + K G+ P FVS
Sbjct: 9 VALYDFEPENDNELRLAEGDIVFISYKH-----GQGWLVA--ENESGSKTGLVPEEFVSY 61
Query: 96 IED 98
I+
Sbjct: 62 IQP 64
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Mus musculus}
Length = 77
Score = 71.7 bits (176), Expect = 7e-16
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 10/71 (14%)
Query: 35 WRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGK-----IEGKIEYKVGIFP 89
+ AL+DY A ++LS R GD ++VL GWW + G + G P
Sbjct: 10 FVALFDYQARTAEDLSFRAGDKLQVLDTS-----HEGWWLARHLEKKGTGLGQQLQGYIP 64
Query: 90 ANFVSSIEDIN 100
+N+V+ +
Sbjct: 65 SNYVAEDSGPS 75
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast,
SH3 domain, structural genomics, contractIle protein;
0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Length = 68
Score = 71.2 bits (175), Expect = 7e-16
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 6/63 (9%)
Query: 32 PDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGK-IEYKVGIFPA 90
P A + Y + D+L+ + + V S + D W+ G+ + + GIFP
Sbjct: 7 PFKVVAQFPYKSDYEDDLNFEKDQEIIVTSVE-----DAEWYFGEYQDSNGDVIEGIFPK 61
Query: 91 NFV 93
+FV
Sbjct: 62 SFV 64
>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel,
beta sheet, zinc finger, metal binding protein; NMR
{Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A
Length = 71
Score = 71.2 bits (175), Expect = 7e-16
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGK-IEGKIEYKVGIFPANFVS 94
+ LY + ++ +EL+ +G+ +EV+ K D WW K G +VG+ P N+V
Sbjct: 10 QTLYPFSSVTEEELNFEKGETMEVIEKP---ENDPEWWKCKNARG----QVGLVPKNYVV 62
Query: 95 SIED 98
+ D
Sbjct: 63 VLSD 66
>2v1r_A Peroxisomal membrane protein PAS20; protein transport,
translocation, transmembrane, peptide COM structural
genomics, peroxisome; 2.1A {Saccharomyces cerevisiae}
SCOP: b.34.2.1
Length = 80
Score = 71.3 bits (175), Expect = 9e-16
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 36 RALYDYDAIGLD-ELSLRRGDIVEVLSKDSAISGDVGWWTGKI-EGKIEYKVGIFPANFV 93
RALYD+ + E++L++GD++ +LSK + D WW + G +G P N++
Sbjct: 18 RALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNG----NIGYIPYNYI 73
Query: 94 SSIED 98
I+
Sbjct: 74 EIIKR 78
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling
protein; 1.80A {Mus musculus}
Length = 60
Score = 70.7 bits (174), Expect = 9e-16
Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 9/58 (15%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFV 93
A +DY ELS ++G + + + WW G+ G G+ P ++
Sbjct: 10 IAKFDYVGRSARELSFKKGASLLLYHRA-----SEDWWEGRHNG----IDGLVPHQYI 58
>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal
transduction, riken structural genomics/proteomics
initiative, RSGI; NMR {Homo sapiens}
Length = 91
Score = 71.7 bits (176), Expect = 1e-15
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGK-IEGKIEYKVGIFPANFVS 94
+ LY + ++ +EL+ +G+ +EV+ K D WW K G +VG+ P N+V
Sbjct: 21 QTLYPFSSVTEEELNFEKGETMEVIEKP---ENDPEWWKCKNARG----QVGLVPKNYVV 73
Query: 95 SIEDI 99
+ D
Sbjct: 74 VLSDG 78
>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project
on protein structural and functional analyses; NMR
{Homo sapiens}
Length = 88
Score = 71.4 bits (175), Expect = 1e-15
Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 11/69 (15%)
Query: 32 PDLWRALYDYD--AIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFP 89
P +A+ A L+L GDIV+V + G W G++ G + G+FP
Sbjct: 16 PVFAKAIQKRVPCAYDKTALALEVGDIVKVTRMN-----INGQWEGEVNG----RKGLFP 66
Query: 90 ANFVSSIED 98
V +
Sbjct: 67 FTHVKIFDP 75
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel,
ATP-binding, developmental protein, lipoprotein,
manganese, metal-binding; 1.60A {Gallus gallus} PDB:
2l2p_A
Length = 79
Score = 70.8 bits (174), Expect = 1e-15
Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 32 PDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPAN 91
L+ ALYDY+A D+LS +G+ ++L+ + WW + + G P+
Sbjct: 5 STLFEALYDYEARTEDDLSFHKGEKFQILNSS-----EGDWWEARSLTT--GETGYIPSI 57
Query: 92 FVSSIEDIN 100
+++ ++ ++
Sbjct: 58 YLAPVDRLD 66
>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
Length = 94
Score = 71.4 bits (175), Expect = 1e-15
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 7/83 (8%)
Query: 18 SDLLYGNHNRRNHRPDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKI 77
S G+ + R + + +Y Y DEL L GD + + + + + GW G
Sbjct: 2 SSGSSGSRDIRFANHETLQVIYPYTPQNDDELELVPGDFIFMSPMEQTSTSE-GWIYGTS 60
Query: 78 E--GKIEYKVGIFPANFVSSIED 98
G G+ P N+++ ++
Sbjct: 61 LTTG----CSGLLPENYITKADE 79
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase,
splicing, human, 10Z-hymendialdisine, structural
genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Length = 339
Score = 76.9 bits (190), Expect = 1e-15
Identities = 62/244 (25%), Positives = 90/244 (36%), Gaps = 78/244 (31%)
Query: 123 EAIGEGGFGKVYKGI---YEKQEVAIKVAHPNPD-------E-NILENVKQEG------- 164
+ +GEG FGKV + I + VA+K+ E +LE++
Sbjct: 20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRC 79
Query: 165 -KLLWLFDHRNIVSLIGVCLQSPKLCLVME------YA-------RGGPLNRVLAGRKIR 210
++L F+H +C+V E Y L+ + RK+
Sbjct: 80 VQMLEWFEHHG------------HICIVFELLGLSTYDFIKENGFLPFRLDHI---RKM- 123
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKT--------- 261
A QI + +N+LH L H DLK N+L + E K
Sbjct: 124 -------AYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLIN 173
Query: 262 --LKITDFGLAREVYKTTHMSAAGTYA----WMAPEVIKTSIFSKASDVWSYGVVLWELL 315
+K+ DFG A Y H S T + APEVI +S+ DVWS G +L E
Sbjct: 174 PDIKVVDFGSA--TYDDEHHS---TLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYY 228
Query: 316 TGEI 319
G
Sbjct: 229 LGFT 232
>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate
repeat-containing protein, structural genomics, NPPSFA;
NMR {Homo sapiens} PDB: 2kea_A
Length = 73
Score = 70.5 bits (173), Expect = 1e-15
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 9/63 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
+ D L L++GDI++++SK +G W G + KVG F +V
Sbjct: 15 HTDFTPSPYDTDSLKLKKGDIIDIISKP-----PMGTWMGLLNN----KVGTFKFIYVDV 65
Query: 96 IED 98
+
Sbjct: 66 LSS 68
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling
protein; NMR {Homo sapiens}
Length = 67
Score = 70.4 bits (173), Expect = 1e-15
Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 11/67 (16%)
Query: 36 RALYDYDAIGLD--ELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFV 93
R + D L+L G++V+V + G W G+ G K G FP V
Sbjct: 10 RVIQKRVPNAYDKTALALEVGELVKVTKIN-----VSGQWEGECNG----KRGHFPFTHV 60
Query: 94 SSIEDIN 100
++ N
Sbjct: 61 RLLDQQN 67
>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N
protein 1; endocytosis, N-WAsp, dynamin, pacsin I,
transferase; 2.64A {Mus musculus} PDB: 2x3x_D
Length = 60
Score = 69.9 bits (172), Expect = 2e-15
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 7/61 (11%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
RALYDYD DELS + GD + L ++ + GW G+++ ++G++PAN+V +
Sbjct: 7 RALYDYDGQEQDELSFKAGDELTKLGEED----EQGWCRGRLDSG---QLGLYPANYVEA 59
Query: 96 I 96
I
Sbjct: 60 I 60
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein,
structural protein; 1.30A {Saccharomyces cerevisiae}
SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Length = 58
Score = 69.9 bits (172), Expect = 2e-15
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFV 93
A YDYDA +EL+ D + + D WW G++E + G+FP+N+V
Sbjct: 4 TAEYDYDAAEDNELTFVENDKIINIEFV-----DDDWWLGELEK--DGSKGLFPSNYV 54
>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein,
protein binding; NMR {Homo sapiens}
Length = 83
Score = 70.7 bits (173), Expect = 2e-15
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 36 RALYDY-DAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEY--KVGIFPANF 92
RAL D+ + L++R GD++ VL + G W G I ++G FP
Sbjct: 22 RALKDFWNLHDPTALNVRAGDVITVLEQH-----PDGRWKGHIHESQRGTDRIGYFPPGI 76
Query: 93 VSSIED 98
V +
Sbjct: 77 VEVVSK 82
>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding
protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A
1neb_A 3i35_A
Length = 64
Score = 69.9 bits (172), Expect = 2e-15
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 35 WRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVS 94
+RA+YDY A DE+S R GD + + D GW G ++ + G+ PAN++
Sbjct: 9 YRAMYDYSAQDEDEVSFRDGDYIVNVQPI-----DDGWMYGTVQRT--GRTGMLPANYIE 61
Query: 95 SI 96
+
Sbjct: 62 FV 63
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export;
2.5A {Homo sapiens} PDB: 2bzx_A
Length = 67
Score = 70.0 bits (172), Expect = 2e-15
Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 11/69 (15%)
Query: 32 PDLWRALYDYD--AIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFP 89
P +A+ A L+L GDIV+V + G W G++ G + G+FP
Sbjct: 1 PVFAKAIQKRVPCAYDKTALALEVGDIVKVTRMN-----INGQWEGEVNG----RKGLFP 51
Query: 90 ANFVSSIED 98
V +
Sbjct: 52 FTHVKIFDP 60
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide);
1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A
1m30_A 1m3b_A 1m3a_A
Length = 57
Score = 69.5 bits (171), Expect = 2e-15
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 10/59 (16%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKI-EGKIEYKVGIFPANFV 93
RAL+D++ ++L ++GDI+ + K + WW + EG K G+ P +V
Sbjct: 5 RALFDFNGNDEEDLPFKKGDILRIRDKP-----EEQWWNAEDSEG----KRGMIPVPYV 54
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase;
1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A
3nr9_A*
Length = 355
Score = 76.2 bits (188), Expect = 3e-15
Identities = 51/244 (20%), Positives = 84/244 (34%), Gaps = 78/244 (31%)
Query: 123 EAIGEGGFGKVYK---GIYEKQEVAIKVAHPNPD-------E-NILENVKQEG------- 164
+GEG FGKV + K +VA+K+ E N+L+ +K++
Sbjct: 25 GNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLC 84
Query: 165 -KLLWLFDHRNIVSLIGVCLQSPKLCLVME------YA-------RGGPLNRVLAGRKIR 210
+ F+ +C+ E + + PL V R +
Sbjct: 85 VLMSDWFNFHG------------HMCIAFELLGKNTFEFLKENNFQPYPLPHV---RHM- 128
Query: 211 PDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK---------- 260
A Q+ + +LH L H DLK N+L
Sbjct: 129 -------AYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKN 178
Query: 261 -TLKITDFGLAREVYKTTHMSAAGTYA----WMAPEVIKTSIFSKASDVWSYGVVLWELL 315
++++ DFG A + H + T + PEVI +++ DVWS G +L+E
Sbjct: 179 TSIRVADFGSA--TFDHEHHT---TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYY 233
Query: 316 TGEI 319
G
Sbjct: 234 RGFT 237
>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418
protein, SH3MD1, SH3 multiple domains 1, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 75
Score = 69.8 bits (171), Expect = 3e-15
Identities = 15/76 (19%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Query: 23 GNHNRRNHRPDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIE 82
G+ + D++ ++ DY+ + + G +EVL ++ GWW +I ++
Sbjct: 1 GSSGSSGNLKDVYVSIADYEGDE-ETAGFQEGVSMEVLERN-----PNGWWYCQILDGVK 54
Query: 83 YKVGIFPANFVSSIED 98
G P+N++
Sbjct: 55 PFKGWVPSNYLEKKNS 70
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria,
structural GE structural genomics consortium, SGC,
transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Length = 360
Score = 76.2 bits (188), Expect = 3e-15
Identities = 57/248 (22%), Positives = 93/248 (37%), Gaps = 82/248 (33%)
Query: 123 EAIGEGGFGKVYKGI--YEKQEVAIKVAHPNP-------DE-NILENVKQEG-------K 165
+G+G FG+V K+ A+KV E +IL+ ++ + K
Sbjct: 41 RKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVK 100
Query: 166 LLWLFDHRNIVSLIGVCLQSPKLCLVME------YA-------RGGPLNRVLAGRKIRPD 212
F + + +CL+ E Y G + + +
Sbjct: 101 YHGKFMYYD------------HMCLIFEPLGPSLYEIITRNNYNGFHIEDI---KLY--- 142
Query: 213 VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFK------------ 260
I+I + +NYL +SL H DLK N+LL +P + L
Sbjct: 143 -----CIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIY 194
Query: 261 -----TLKITDFGLAREVYKTTHMSAAGTYA----WMAPEVIKTSIFSKASDVWSYGVVL 311
+K+ DFG A +K+ + + + APEVI + +SD+WS+G VL
Sbjct: 195 RTKSTGIKLIDFGCA--TFKSDYHG---SIINTRQYRAPEVILNLGWDVSSDMWSFGCVL 249
Query: 312 WELLTGEI 319
EL TG +
Sbjct: 250 AELYTGSL 257
>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3,
SH3-containing adapter molecule 1, SCAM-1, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 90
Score = 70.2 bits (172), Expect = 3e-15
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
A Y + ELS R+G+ + ++ K + W+ G+I G + GIFPA++V
Sbjct: 21 VAQYTFKGDLEVELSFRKGEHICLIRKV-----NENWYEGRITGT--GRQGIFPASYVQV 73
Query: 96 IED 98
+
Sbjct: 74 SRE 76
>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}
Length = 68
Score = 69.6 bits (171), Expect = 3e-15
Identities = 16/77 (20%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
Query: 23 GNHNRRNHRPDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGK-IEGKI 81
G+ + + + + A+ D+ A + +L+ ++G+I+ V+ K GWW K +G
Sbjct: 1 GSESHKWSTGEEYIAVGDFTAQQVGDLTFKKGEILLVIEKK-----PDGWWIAKDAKG-- 53
Query: 82 EYKVGIFPANFVSSIED 98
G+ P ++ +
Sbjct: 54 --NEGLVPRTYLEPYSE 68
>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked
agammaglobulinemia, XLA, BTK, SH3 domain, transferase;
NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A
Length = 67
Score = 69.2 bits (170), Expect = 3e-15
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
ALYDY + ++L LR+GD +L + ++ WW + + + G P+N+V+
Sbjct: 12 VALYDYMPMNANDLQLRKGDEYFILEES-----NLPWWRARDKNG---QEGYIPSNYVTE 63
Query: 96 IED 98
ED
Sbjct: 64 AED 66
>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine
proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C*
4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 1fyn_A
1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C*
1qwe_A 1qwf_A 1prl_C ...
Length = 84
Score = 69.7 bits (171), Expect = 4e-15
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
ALYDY+A +LS +G+ ++L WW + + G P+N+V+
Sbjct: 10 VALYDYNATRWTDLSFHKGEKFQILEFG-----PGDWWEARSLTT--GETGYIPSNYVAP 62
Query: 96 IEDIN 100
++ I
Sbjct: 63 VDSIQ 67
>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; NMR {Homo sapiens}
Length = 72
Score = 69.3 bits (170), Expect = 4e-15
Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Query: 30 HRPDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIE-GKIEYKVGIF 88
H + L+D+ + +ELS R GD+ V K+ + WW ++ G
Sbjct: 8 HLGPKYVGLWDFKSRTDEELSFRAGDVFHVARKE-----EQWWWATLLDEAGGAVAQGYV 62
Query: 89 PANFV 93
P N++
Sbjct: 63 PHNYL 67
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3,
actin-binding, cytoplasm, cytoskeleton, phosphorylation,
SH3 domain, DNA damage, DNA repair, nucleus; NMR
{Saccharomyces cerevisiae}
Length = 71
Score = 68.4 bits (168), Expect = 7e-15
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
YD+ A DEL+++ GD V +L WW ++ K G+ PA F+
Sbjct: 10 IVQYDFMAESQDELTIKSGDKVYILDDKK----SKDWWMCQLVDS--GKSGLVPAQFIEP 63
Query: 96 IEDIN 100
+ D
Sbjct: 64 VRDKK 68
>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 76
Score = 68.6 bits (168), Expect = 8e-15
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 15/70 (21%)
Query: 36 RALYDYDA-------IGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIF 88
ALYDYD EL+ GDI+ V + + G++ G++ G + G+
Sbjct: 11 VALYDYDPRESSPNVDVEAELTFCTGDIITVFGE----IDEDGFYYGELNG----QKGLV 62
Query: 89 PANFVSSIED 98
P+NF+ +
Sbjct: 63 PSNFLEEVSG 72
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural
protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A
2kr3_A
Length = 65
Score = 68.1 bits (167), Expect = 9e-15
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKI----EGKIEYKVGIFPAN 91
ALYDY E+++++GDI+ +L+ + WW ++ GK + G PA
Sbjct: 5 LALYDYQEKSPREVTMKKGDILTLLNST-----NKDWWKVEVKITVNGKTYERQGFVPAA 59
Query: 92 FVSSIE 97
+V ++
Sbjct: 60 YVKKLD 65
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP:
b.34.2.1
Length = 71
Score = 68.1 bits (167), Expect = 9e-15
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
A Y++ +L +GD++ +++ D W+ K + + GI PAN+V
Sbjct: 15 IAKYNFHGTAEQDLPFCKGDVLTIVAVTK----DPNWYKAKNKVG---REGIIPANYVQK 67
Query: 96 IEDI 99
E +
Sbjct: 68 REGV 71
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase,
alternative splicing, ATP-binding, chromosome partition,
differentiation, mRNA processing; 1.73A {Homo sapiens}
PDB: 1wbp_A* 3beg_A* 2x7g_A*
Length = 397
Score = 74.9 bits (184), Expect = 9e-15
Identities = 54/255 (21%), Positives = 98/255 (38%), Gaps = 70/255 (27%)
Query: 125 IGEGGFGKVY--KGIYEKQEVAIKV--AHPNPDE------NILENVKQEGKLLWLFDHRN 174
+G G F V+ I K+ VA+KV + + E +L++V+ + N
Sbjct: 45 LGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDP-----NDPN 99
Query: 175 ---IVSLIGV-CLQSPK---LCLVMEYARGGPLNRVLA---GRKIRPDVLVDWAIQIAEG 224
+V L+ + +C+V E G L + + + + + Q+ +G
Sbjct: 100 REMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQG 158
Query: 225 MNYLHCQAPISLIHRDLKSSNVLLSEP--------------------------------- 251
++YLH + I IH D+K N+LLS
Sbjct: 159 LDYLHTKCRI--IHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPAT 216
Query: 252 --------IENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSIFSKASD 303
+E ++ + +KI D G A V+K T + + EV+ S ++ +D
Sbjct: 217 AGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-FTEDIQTRQYRSLEVLIGSGYNTPAD 275
Query: 304 VWSYGVVLWELLTGE 318
+WS + +EL TG+
Sbjct: 276 IWSTACMAFELATGD 290
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor,
PF670462, transferase-transferase I complex; HET: 0CK;
1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Length = 296
Score = 73.9 bits (182), Expect = 1e-14
Identities = 70/293 (23%), Positives = 114/293 (38%), Gaps = 40/293 (13%)
Query: 117 NKLIFGEAIGEGGFGKVYKG--IYEKQEVAIKVAHPNPDENILENVKQEGKLL-WLFDHR 173
N+ G IG G FG +Y G I +EVAIK+ L E K+ +
Sbjct: 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHI---ESKIYKMMQGGV 65
Query: 174 NIVSLIGVCLQSPKLCLVMEYARGGP-LN--RVLAGRKIRPDVLVDWAIQIAEGMNYLHC 230
I ++ + +VME GP L RK ++ A Q+ + Y+H
Sbjct: 66 GIPTIRWCGAEGDYNVMVMELL--GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 123
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVY-KTTHM--------SA 281
+ + IHRD+K N L+ + + I DFGLA++ TH +
Sbjct: 124 K---NFIHRDVKPDNFLMGLGKKG-----NLVYIIDFGLAKKYRDARTHQHIPYRENKNL 175
Query: 282 AGTYAWMAPEVIKTSIFSKAS---DVWSYGVVLWELLTGEIPYKSINAYAVAYG---VAV 335
GT + + I T + + S D+ S G VL G +P++ + A ++
Sbjct: 176 TGTARYAS---INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE 232
Query: 336 NKLTLPIPSTC---PQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQ 385
K++ PI C P F T + C +P + + + N+ H +
Sbjct: 233 KKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS 285
>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm,
cytoskeleton, SH3 domain, SIG protein; NMR
{Saccharomyces cerevisiae} PDB: 2rqw_A
Length = 108
Score = 69.0 bits (169), Expect = 1e-14
Identities = 17/78 (21%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
LYD+ A DEL+ G+ + + + + W+ K G++ G+ P FVS
Sbjct: 9 IVLYDFKAEKADELTTYVGENLFICAHH-----NCEWFIAKPIGRLG-GPGLVPVGFVSI 62
Query: 96 IEDINLVSSVINDVKLVE 113
I+ ++ + ++ ++
Sbjct: 63 IDIATGYATGNDVIEDIK 80
>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin
SH3 domain, SPC-S19P20S circular permutant, S protein;
NMR {Synthetic}
Length = 73
Score = 67.8 bits (166), Expect = 1e-14
Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 10/63 (15%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
L Y A G E+++++GDI+ +L+ + WW ++ + G PA +V
Sbjct: 4 PPLPPYSAGG-REVTMKKGDILTLLNST-----NKDWWKVEVNDR----QGFVPAAYVKK 53
Query: 96 IED 98
++
Sbjct: 54 LDS 56
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain,
phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Length = 67
Score = 67.7 bits (166), Expect = 1e-14
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
A+YD+ A +L L RG +L K+ D+ WW + + G P+N+V+
Sbjct: 6 VAMYDFQATEAHDLRLERGQEYIILEKN-----DLHWWRARDKYG---SEGYIPSNYVTG 57
Query: 96 IEDINL 101
+ NL
Sbjct: 58 KKSNNL 63
>1w1f_A Tyrosine-protein kinase LYN; SH3-domain, SH3 domain, tyrosine
kinase, signal transduction; NMR {Homo sapiens} PDB:
1wa7_A
Length = 65
Score = 67.3 bits (165), Expect = 1e-14
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 31 RPDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPA 90
+ D+ ALY YD I D+LS ++G+ ++VL + WW K + K G P+
Sbjct: 6 QGDIVVALYPYDGIHPDDLSFKKGEKMKVLEEHG------EWWKAK--SLLTKKEGFIPS 57
Query: 91 NFVSSIE 97
N+V+ +
Sbjct: 58 NYVAKLN 64
>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 79
Score = 67.8 bits (166), Expect = 2e-14
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 8/63 (12%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
+ A DE++L++ D+V VL ++ GW G E + + G FP +F
Sbjct: 21 EITKAFFAKQADEVTLQQADVVLVLQQED------GWLYG--ERLRDGETGWFPEDFARF 72
Query: 96 IED 98
I
Sbjct: 73 ISG 75
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A
{Saccharomyces cerevisiae} PDB: 1yp5_A
Length = 58
Score = 66.9 bits (164), Expect = 2e-14
Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
Query: 34 LWRALYDYDA-IGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANF 92
++ A YD+ EL L++GD++ + ++ GW GK+ K G P +
Sbjct: 2 MFEAAYDFPGSGSPSELPLKKGDVIYITREE-----PSGWSLGKLLD--GSKEGWVPTAY 54
Query: 93 V 93
+
Sbjct: 55 M 55
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural
genomics, phosphorylation, structural protein, yeast,
SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Length = 60
Score = 67.2 bits (165), Expect = 2e-14
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFV 93
YD+ A DEL+++ GD V +L WW ++ K G+ PA F+
Sbjct: 6 IVQYDFMAESQDELTIKSGDKVYILDDKK----SKDWWMCQLVDS--GKSGLVPAQFI 57
>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched
library, clone:9530076O17...; SH3_1 domain; NMR {Mus
musculus}
Length = 109
Score = 68.3 bits (167), Expect = 3e-14
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Query: 30 HRPDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFP 89
++ ALYDY+A ++LS ++G+ ++++ + WW + K G P
Sbjct: 25 GGVTIFVALYDYEARTTEDLSFKKGERFQIINNT-----EGDWWEARSIAT--GKSGYIP 77
Query: 90 ANFVSSIEDI 99
+N+V + I
Sbjct: 78 SNYVVPADSI 87
>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein
1; IRTKS-SH3, espfu, complex structure, protein
binding; NMR {Homo sapiens}
Length = 67
Score = 66.6 bits (163), Expect = 3e-14
Identities = 13/64 (20%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Query: 36 RALYDYDAI-GLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVS 94
+ ++ + A LS +GD++ +L + GW G+ + G FP+++
Sbjct: 10 KTIFPHTAGSNKTLLSFAQGDVITLLIPEE----KDGWLYGEHDVSK--ARGWFPSSYTK 63
Query: 95 SIED 98
+E+
Sbjct: 64 LLEE 67
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A
{Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A*
2csn_A*
Length = 298
Score = 72.0 bits (177), Expect = 4e-14
Identities = 63/294 (21%), Positives = 110/294 (37%), Gaps = 40/294 (13%)
Query: 117 NKLIFGEAIGEGGFGKVYKG--IYEKQEVAIKVAHPNPDENILENVKQEGKLL-WLFDHR 173
G IGEG FG +++G + Q+VAIK D L + E + L
Sbjct: 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRD---EYRTYKLLAGCT 66
Query: 174 NIVSLIGVCLQSPKLCLVMEYARGGP-LNRVLA--GRKIRPDVLVDWAIQIAEGMNYLHC 230
I ++ + LV++ GP L +L GRK + A Q+ + +H
Sbjct: 67 GIPNVYYFGQEGLHNVLVIDLL--GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE 124
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT----THM------S 280
+ SL++RD+K N L+ P + + DFG+ + Y+ H+ +
Sbjct: 125 K---SLVYRDIKPDNFLIGRP---NSKNANMIYVVDFGMVKF-YRDPVTKQHIPYREKKN 177
Query: 281 AAGTYAWMAPEVIKTSIFSKAS---DVWSYGVVLWELLTGEIP---YKSINAYAVAYGVA 334
+GT +M+ I T + + S D+ + G V L G +P K+ +
Sbjct: 178 LSGTARYMS---INTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIG 234
Query: 335 VNKLTLPIPSTC---PQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQ 385
K + P+ C P+ F M P + + + ++
Sbjct: 235 EKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTT 288
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase,
transferase, ATP- binding, phosphorylation,
nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB:
2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Length = 330
Score = 72.4 bits (178), Expect = 4e-14
Identities = 64/266 (24%), Positives = 99/266 (37%), Gaps = 41/266 (15%)
Query: 117 NKLIFGEAIGEGGFGKVYKG--IYEKQEVAIKVAHPNPDENILENVKQEGKLL-WLFDHR 173
G+ IG G FG++ G +Y + VAIK+ L E + L
Sbjct: 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHL---EYRFYKQLGSGD 65
Query: 174 NIVSLIGVCLQSPKLCLVMEYARGGP-LN--RVLAGRKIRPDVLVDWAIQIAEGMNYLHC 230
I + +V+E GP L L R ++ AIQ+ M Y+H
Sbjct: 66 GIPQVYYFGPCGKYNAMVLELL--GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHS 123
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK--TTHM--------S 280
+ +LI+RD+K N L+ P + + + I DF LA+E Y T S
Sbjct: 124 K---NLIYRDVKPENFLIGRP---GNKTQQVIHIIDFALAKE-YIDPETKKHIPYREHKS 176
Query: 281 AAGTYAWMAPEVIKTSIFSKAS---DVWSYGVVLWELLTGEIP---YKSINAYAVAYGVA 334
GT +M+ I T + + S D+ + G + L G +P K+ +
Sbjct: 177 LTGTARYMS---INTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIG 233
Query: 335 VNKLTLPIPSTC---PQLFKTLMEAC 357
K PI C P+ T +
Sbjct: 234 DTKRATPIEVLCENFPE-MATYLRYV 258
>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 97
Score = 67.2 bits (164), Expect = 4e-14
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 16/73 (21%)
Query: 36 RALYDYDAIGL--------DELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGI 87
AL+DYD + + +EL + G I++V G++ G+ ++G+
Sbjct: 21 VALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGD----KDADGFYRGETCA----RLGL 72
Query: 88 FPANFVSSIEDIN 100
P N VS I+ +
Sbjct: 73 IPCNMVSEIQADD 85
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural
genomics, joint CENT structural genomics, JCSG, protein
structure initiative; HET: MLY; 2.20A {Homo sapiens}
PDB: 2frw_A 2js0_A
Length = 58
Score = 66.0 bits (161), Expect = 4e-14
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 9/63 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
+ Y A DELSL G V V+ GWW G G ++G FP+N+V
Sbjct: 5 FVXFAYVAEREDELSLVXGSRVTVMEXC-----SDGWWRGSYNG----QIGWFPSNYVLE 55
Query: 96 IED 98
D
Sbjct: 56 EVD 58
>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane;
2.05A {Saccharomyces cerevisiae}
Length = 70
Score = 66.2 bits (162), Expect = 4e-14
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 11/65 (16%)
Query: 36 RALYDYDAIGLD--ELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFV 93
+ALY YDA D E+S + +I++V + WW + + GI P+N+V
Sbjct: 9 KALYPYDADDDDAYEISFEQNEILQVSDIEG------RWWKARRANG---ETGIIPSNYV 59
Query: 94 SSIED 98
I+
Sbjct: 60 QLIDG 64
>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Mus musculus}
Length = 77
Score = 65.8 bits (161), Expect = 7e-14
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 10/65 (15%)
Query: 36 RALYDYDA-IGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIE-GKIEYKVGIFPANFV 93
R +YD+ A G +EL++ G+I+ V + + GW GK G + G+ P ++V
Sbjct: 13 RVMYDFAAEPGNNELTVTEGEIITVTNPNV----GGGWLEGKNNKG----EQGLVPTDYV 64
Query: 94 SSIED 98
+ +
Sbjct: 65 EILPN 69
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels,
signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP:
b.34.2.1 PDB: 1h92_A 1kik_A
Length = 62
Score = 65.4 bits (160), Expect = 7e-14
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Query: 31 RPDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPA 90
+ +L AL+ Y+ +L +G+ + +L + SG+ WW + + G P
Sbjct: 5 QDNLVIALHSYEPSHDGDLGFEKGEQLRILEQ----SGE--WWKAQ--SLTTGQEGFIPF 56
Query: 91 NFV 93
NFV
Sbjct: 57 NFV 59
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 75
Score = 65.5 bits (160), Expect = 9e-14
Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 15/68 (22%)
Query: 36 RALYDYDAIGL-------DELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIF 88
A DYD L+LR GD+V V D G++ G++ G G+
Sbjct: 11 IAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGP----MDDQGFYYGELGG----HRGLV 62
Query: 89 PANFVSSI 96
PA+ + +
Sbjct: 63 PAHLLDHM 70
>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR,
CDC42P-interacting, S signaling protein; NMR
{Lodderomyces elongisporus}
Length = 120
Score = 66.5 bits (162), Expect = 1e-13
Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
LY++ A DEL + G+ + + + D W+ K ++ G+ P ++V
Sbjct: 7 VTLYEFKAERDDELDVSPGENLSICAHY-----DYEWFIAKPINRLG-GPGLVPVSYVRI 60
Query: 96 IEDIN 100
I+ ++
Sbjct: 61 IDLMD 65
>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase,
tyrosine-protein kinase LYK, kinase EMT, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 85
Score = 65.5 bits (160), Expect = 1e-13
Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
ALYDY EL+LRR + +L ++ WW + G P++++
Sbjct: 23 IALYDYQTNDPQELALRRNEEYCLLDSS-----EIHWWRVQDRNG---HEGYVPSSYLVE 74
Query: 96 IEDINL 101
NL
Sbjct: 75 KSPNNL 80
>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3
domain, five-stranded barrel, mouse cDNA; NMR {Mus
musculus} SCOP: b.34.2.1
Length = 72
Score = 65.1 bits (159), Expect = 1e-13
Identities = 12/64 (18%), Positives = 27/64 (42%), Gaps = 7/64 (10%)
Query: 36 RALYDYDAI-GLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVS 94
+ ++ + A LS +GD++ +L + GW G+ + G FP+++
Sbjct: 11 KTIFPHTAGNNKTLLSFAQGDVLTLLIPEE----KDGWLYGEHDTTK--ARGWFPSSYTK 64
Query: 95 SIED 98
+
Sbjct: 65 LLSG 68
>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine
kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A
4hck_A 5hck_A
Length = 86
Score = 65.5 bits (160), Expect = 1e-13
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 8/64 (12%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
ALYDY+AI ++LS ++GD + VL + SG+ WW K G P+N+V+
Sbjct: 29 VALYDYEAIHHEDLSFQKGDQMVVLEE----SGE--WWKA--RSLATRKEGYIPSNYVAR 80
Query: 96 IEDI 99
++ +
Sbjct: 81 VDSL 84
>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3
domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo
sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A
1wlp_B
Length = 193
Score = 68.5 bits (167), Expect = 1e-13
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFV 93
RA+ DY+ E++L GD+VEV+ K + GWW +++ K G PA+F+
Sbjct: 15 RAIADYEKTSGSEMALSTGDVVEVVEKS-----ESGWWFCQMKA----KRGWIPASFL 63
Score = 66.2 bits (161), Expect = 8e-13
Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 15 EVDSDLLYGNHNRRNHRPDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWT 74
E N+ + + A+ Y A+ DE+SL G+ VEV+ K GWW
Sbjct: 64 EPLDSPDETEDPEPNYAGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHKL-----LDGWWV 118
Query: 75 GKIEGKIEYKVGIFPANFVSSIED 98
+ + G FP+ ++
Sbjct: 119 IRKDD----VTGYFPSMYLQKSGQ 138
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 73.0 bits (178), Expect = 1e-13
Identities = 91/628 (14%), Positives = 174/628 (27%), Gaps = 215/628 (34%)
Query: 5 LDSMEHPYQNEVDSDLLYGNHNRR--------NHRPDLWRALY---DYDAI---GLDELS 50
++ Y+ D+L + D+ +++ + D I
Sbjct: 11 TGEHQYQYK-----DIL--SVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSG 63
Query: 51 LRR---------GDIVEVLSKDSAISGDVGWWTGKIEGK-----------IEYK------ 84
R ++V+ ++ + + + I+ + IE +
Sbjct: 64 TLRLFWTLLSKQEEMVQKFVEE-VLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYND 122
Query: 85 VGIFPANFVSSIEDINLVSSVINDVKLVEIDYNKLIFGEAIGEGGFGKVYKGIYEKQEVA 144
+F VS ++ + L+E+ K + + G G GK VA
Sbjct: 123 NQVFAKYNVSRLQPYLKLRQ-----ALLELRPAKNVLID--GVLGSGK--------TWVA 167
Query: 145 IKVAHPNPDENILENVKQEGKLLWL-FDHRNIVSLIGVCLQS------PKLCLVMEYARG 197
+ V + K + K+ WL + N + LQ P +++
Sbjct: 168 LDVCL---SYKVQC--KMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSN 222
Query: 198 GP---------LNRVLAGRKIRPDVLV-D--WAIQIAEGMNYLHCQAPISLIHRDLKSSN 245
L R+L + +LV + N L C+ I L R + ++
Sbjct: 223 IKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFN-LSCK--ILLTTRFKQVTD 279
Query: 246 VLLS---------------EPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAP 290
L + P E + L K L L REV T P
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT------------NP 327
Query: 291 EVIKTSIFSKA-SDVWSYGVVLWELLTGEIPYKSINAYAVAYGVAVNKLTLPIPSTCPQL 349
+ SI +++ D G+ W+ +K +N +KLT
Sbjct: 328 RRL--SIIAESIRD----GLATWD------NWKHVN---------CDKLT---------- 356
Query: 350 FKTLMEACWEA--DSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQDGWRVEI-EQVL 406
T++E+ + R F + + I +L
Sbjct: 357 --TIIESSLNVLEPAEYRKMF--------------------DRLSVFPPS--AHIPTILL 392
Query: 407 HELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAAREIDVLERELMIILQTAGPT 466
+ + + + KL + L E++ + I + EL
Sbjct: 393 SLIWFDVIK---SDVM----VVVNKLHKYSLVEKQPKESTISIPSIYLEL---KVKLENE 442
Query: 467 PTPHKRG-GKFNRSKLKVWKVHDISSPSDF--------RHTLTVQPTER----------- 506
H+ +N K + D+ P H ++ ER
Sbjct: 443 YALHRSIVDHYN--IPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDF 500
Query: 507 -----KSRKATSPPGSPS--IPRLQAFK 527
K R ++ + + LQ K
Sbjct: 501 RFLEQKIRHDSTAWNASGSILNTLQQLK 528
Score = 37.1 bits (85), Expect = 0.017
Identities = 43/342 (12%), Positives = 94/342 (27%), Gaps = 110/342 (32%)
Query: 165 KLLWLFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEG 224
+ SL+ L L E P + IR D L W
Sbjct: 293 HHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIR-DGLATWD------ 345
Query: 225 MNYLHCQAPISLIHRDLKSS-NVLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAG 283
N+ H + ++SS NVL EP E R+++
Sbjct: 346 -NWKHVN--CDKLTTIIESSLNVL--EPAEY----------------RKMFD-------- 376
Query: 284 TYAWMAPEVIKTSIFSKASDVW-SYGV--VLWELLTGEIP---------YKSINAYAVAY 331
+ S+F + ++W + Y +
Sbjct: 377 ----------RLSVFPP--SAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKES 424
Query: 332 GVAVNKLTLPIPSTC---PQLFKTLMEA-----CWEADS----------------HMRPS 367
+++ + L + L +++++ +++D H++
Sbjct: 425 TISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNI 484
Query: 368 --------FKTILKALNNIVHSEFIQTPHESFHIMQDG--W--RVEIEQVLHELRVKEKE 415
F+ + F++ I D W I L +L+ +
Sbjct: 485 EHPERMTLFRMVFLDFR------FLEQ-----KIRHDSTAWNASGSILNTLQQLKFYKPY 533
Query: 416 LRSREEELTKAQMQQKLAEKELREREQAVAAREIDVLERELM 457
+ + + ++ + + + E + ++ D+L LM
Sbjct: 534 ICDNDPKYE--RLVNAILDFLPKIEENLICSKYTDLLRIALM 573
>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL,
SH3 domain, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 81
Score = 65.1 bits (159), Expect = 1e-13
Identities = 11/65 (16%), Positives = 22/65 (33%), Gaps = 6/65 (9%)
Query: 35 WRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVS 94
++ EL+ R+GD+V +L + W+ K + G+ A +
Sbjct: 20 CITKCEHTRPKPGELAFRKGDVVTILEA----CENKSWYRVKHHTS--GQEGLLAAGALR 73
Query: 95 SIEDI 99
Sbjct: 74 ERSGP 78
>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput,
structural genomics, contractIle protein; 1.80A
{Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A
Length = 69
Score = 64.6 bits (158), Expect = 2e-13
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 8/64 (12%)
Query: 36 RALYDYDAIGL-DELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVS 94
A YD+ G EL L++GDIV + + GW K+ K G P +++
Sbjct: 6 EAAYDFPGSGSSSELPLKKGDIVFISRDE-----PSGWSLAKLLD--GSKEGWVPTAYMT 58
Query: 95 SIED 98
+D
Sbjct: 59 PYKD 62
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces
cerevisiae} SCOP: b.34.2.1
Length = 58
Score = 64.1 bits (157), Expect = 2e-13
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFV 93
+ LY Y DE+++ GD + ++++D +G GW KI + G+ P ++
Sbjct: 5 KVLYAYVQKDDDEITITPGDKISLVARD---TGS-GWT--KINNDTTGETGLVPTTYI 56
>1wxb_A Epidermal growth factor receptor pathway substrate 8-like
protein; SH3, EPS8, EPS8L2, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 68
Score = 64.2 bits (157), Expect = 2e-13
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 9/58 (15%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFV 93
+ LYD+ A +ELS+ + +++EVL G W G + G P N +
Sbjct: 11 KILYDFTARNANELSVLKDEVLEVLED-----GRQWWKLRSRSG----QAGYVPCNIL 59
>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 78
Score = 64.3 bits (157), Expect = 2e-13
Identities = 12/63 (19%), Positives = 25/63 (39%), Gaps = 7/63 (11%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
+ +Y Y A DEL++ +++EV+ + W + +VG P ++
Sbjct: 17 KVVYSYKASQPDELTIEEHEVLEVIEDG---DME-DWVKAR---NKVGQVGYVPEKYLQF 69
Query: 96 IED 98
Sbjct: 70 PTS 72
>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein
10, SH3 domain, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 70
Score = 63.8 bits (156), Expect = 3e-13
Identities = 12/63 (19%), Positives = 27/63 (42%), Gaps = 7/63 (11%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
A+Y ++ +S+ G+ + ++ +D GD GW + + E G P +++
Sbjct: 11 VAIYHFEGSSEGTISMAEGEDLSLMEED---KGD-GWTRVR---RKEGGEGYVPTSYLRV 63
Query: 96 IED 98
Sbjct: 64 TSG 66
>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural
genomics, structural genomics consortium, SGC, BE
barrel; HET: EDT; 1.50A {Homo sapiens}
Length = 67
Score = 63.5 bits (155), Expect = 4e-13
Identities = 14/63 (22%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Query: 36 RALYDYDAI-GLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVS 94
+A++ + A LS + GD++ +L ++ GW G+ E G FP ++
Sbjct: 11 KAIFSHAAGDNSTLLSFKEGDLITLLVPEA----RDGWHYGESEK--TKMRGWFPFSYTR 64
Query: 95 SIE 97
++
Sbjct: 65 VLD 67
>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling
protein; 2.52A {Caenorhabditis elegans}
Length = 308
Score = 69.1 bits (168), Expect = 4e-13
Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 10/92 (10%)
Query: 2 PPLLDSMEHPYQNEVDSDLLYGNHNRRNHRPDLWRALYDYDAIGLDELSLRRGDIVEVLS 61
P + + H + L + + + + +L +G+ +E+LS
Sbjct: 119 PDIPALLNHFKMRVLTEASLLAAYKKPIIEV--VVGTFKFTGERETDLPFEQGERLEILS 176
Query: 62 KDSAISGDVGWWTGKIEGKIEYKVGIFPANFV 93
K + WW + G+ PAN+V
Sbjct: 177 KT-----NQDWWEARNALG---TTGLVPANYV 200
Score = 58.7 bits (141), Expect = 1e-09
Identities = 13/93 (13%), Positives = 30/93 (32%), Gaps = 11/93 (11%)
Query: 8 MEHPYQNEVDSDLLYGNHNRRNHRPDLWRALYDYDAIGLD--ELSLRRGDIVEVLSKDSA 65
+ + N + P + +D D +L +++G V V K
Sbjct: 223 SGGGAERFSSASTSSDNIELQPRLPAKAKVTFDRVPNAYDPTQLRVKKGQTVLVTQKM-- 280
Query: 66 ISGDVGWWTGKIEGKIEYKVGIFPANFVSSIED 98
G + +++G+ +G P ++
Sbjct: 281 ---SNGMYKAELDGQ----IGSVPHTYLRFTAV 306
>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator,
P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 71
Score = 63.5 bits (155), Expect = 5e-13
Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 8/64 (12%)
Query: 36 RALYDYDAIG-LDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVS 94
RA+ Y + DE+S +GD+ V ++ + GW + G+ + V
Sbjct: 11 RAILPYTKVPDTDEISFLKGDMFIVHNEL-----EDGWMWV--TNLRTDEQGLIVEDLVE 63
Query: 95 SIED 98
+
Sbjct: 64 EVSG 67
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3
(SH3) domain, all beta structure, signaling protein;
HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Length = 62
Score = 62.6 bits (153), Expect = 6e-13
Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 7/61 (11%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
RA++ + DEL L D + V + + W+ G+FPA +
Sbjct: 7 RAIFRFVPRHEDELELEVDDPLLVELQA-----EDYWYEA--YNMRTGARGVFPAYYAIE 59
Query: 96 I 96
+
Sbjct: 60 V 60
>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold
protein 1, islet-brain-1, IB-1, mitogen-activated P
kinase 8-interacting protein 1; 3.00A {Rattus
norvegicus}
Length = 71
Score = 63.1 bits (154), Expect = 6e-13
Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 7/61 (11%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
RA++ + DEL L D + V + W+ G+FPA +
Sbjct: 10 RAIFRFVPRHEDELELEVDDPLLVELQAED-----YWYEA--YNMRTGARGVFPAYYAIE 62
Query: 96 I 96
+
Sbjct: 63 V 63
>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 79
Score = 62.8 bits (153), Expect = 7e-13
Identities = 14/68 (20%), Positives = 23/68 (33%), Gaps = 8/68 (11%)
Query: 32 PDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPAN 91
D L DY + + RRG+ + V+S + GWW + P
Sbjct: 17 SDFLAVLSDYPSPDISPPIFRRGEKLRVISDEG------GWWKAIS--LSTGRESYIPGI 68
Query: 92 FVSSIEDI 99
V+ +
Sbjct: 69 CVARVSGP 76
>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein
3, protein-protein interaction, structural genomics;
NMR {Homo sapiens}
Length = 68
Score = 62.7 bits (153), Expect = 8e-13
Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 9/64 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
+ LY+++A EL++ +G+ +EVL S W G + G P+N +
Sbjct: 11 QVLYEFEARNPRELTVVQGEKLEVLDH----SKR-WWLVKNEAG----RSGYIPSNILEP 61
Query: 96 IEDI 99
+
Sbjct: 62 LSGP 65
>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D
of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis,
membrane, phagocytosis; NMR {Homo sapiens}
Length = 119
Score = 64.3 bits (156), Expect = 8e-13
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFV 93
A+Y++ G +LSL+ GD+V + W+ G + + GIFP +F+
Sbjct: 63 VAIYNFQGSGAPQLSLQIGDVVRIQETCG------DWYRGYLIKH-KMLQGIFPKSFI 113
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol,
transferase; 2.00A {Oryza sativa japonica group}
Length = 483
Score = 69.3 bits (169), Expect = 9e-13
Identities = 70/294 (23%), Positives = 117/294 (39%), Gaps = 42/294 (14%)
Query: 117 NKLIFGEAIGEGGFGKVYKG--IYEKQEVAIKVAHPNPDENILENVKQEGKLL-WLFDHR 173
NK G IG G FG++Y G I +EVAIK+ + L E K+ L
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLY---ESKIYRILQGGT 63
Query: 174 NIVSLIGVCLQSPKLCLVMEYARGGP-LN--RVLAGRKIRPDVLVDWAIQIAEGMNYLHC 230
I ++ ++ LVM+ GP L RK+ ++ A Q+ + ++H
Sbjct: 64 GIPNVRWFGVEGDYNVLVMDLL--GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS 121
Query: 231 QAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK--TTHM--------S 280
+ S +HRD+K N L+ + I DFGLA++ Y+ +TH +
Sbjct: 122 K---SFLHRDIKPDNFLMGLGRRA-----NQVYIIDFGLAKK-YRDTSTHQHIPYRENKN 172
Query: 281 AAGTYAWMAPEVIKTSIFSKAS---DVWSYGVVLWELLTGEIP---YKSINAYAVAYGVA 334
GT + + + T + + S D+ S G VL L G +P K+ ++
Sbjct: 173 LTGTARYAS---VNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS 229
Query: 335 VNKLTLPIPSTC---PQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQ 385
K+ I + C P F + C +P + + + ++ E Q
Sbjct: 230 EKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQ 283
>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3
domain, protein binding; 2.01A {Homo sapiens} PDB:
2kt1_A
Length = 90
Score = 63.1 bits (153), Expect = 1e-12
Identities = 18/82 (21%), Positives = 28/82 (34%), Gaps = 12/82 (14%)
Query: 25 HNRRNHRPDLWRALYDYDAIGLDELSLRRGDIVEVLSK----------DSAISGDVGWWT 74
+ +RALY + ++L L GD++ V VGW
Sbjct: 4 GSMAGPEGFQYRALYPFRRERPEDLELLPGDVLVVSRAALQALGVAEGGERCPQSVGWMP 63
Query: 75 GKIEGKIEYKVGIFPANFVSSI 96
G E + G FP +V +
Sbjct: 64 GLNERT--RQRGDFPGTYVEFL 83
>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR
{Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A
2k7a_A
Length = 77
Score = 62.4 bits (152), Expect = 1e-12
Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 8/58 (13%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFV 93
ALYDY EL+LR + +L ++ WW + + G P++++
Sbjct: 24 IALYDYQTNDPQELALRCDEEYYLLDSS-----EIHWWRVQDKNG---HEGYAPSSYL 73
>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3,
signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A
2l3q_A 2ggr_A
Length = 304
Score = 67.3 bits (163), Expect = 2e-12
Identities = 18/94 (19%), Positives = 30/94 (31%), Gaps = 11/94 (11%)
Query: 7 SMEHPYQNEVDSDLLYGNHNRRNHRPDLWR--ALYDYDAIGLDELSLRRGDIVEVLSKDS 64
+ P + + P R +A L+L G++V+V +
Sbjct: 212 PLGGPEPGPYAQPSVNTPLPNLQNGPIYARVIQKRVPNAYDKTALALEVGELVKVTKIN- 270
Query: 65 AISGDVGWWTGKIEGKIEYKVGIFPANFVSSIED 98
G W G+ G K G FP V ++
Sbjct: 271 ----VSGQWEGECNG----KRGHFPFTHVRLLDQ 296
Score = 56.5 bits (135), Expect = 6e-09
Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 8/77 (10%)
Query: 22 YGNHNRRNHRPDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKI 81
R + RAL+D++ ++L ++GDI+ + K + WW +
Sbjct: 124 GSGVILRQEEAEYVRALFDFNGNDEEDLPFKKGDILRIRDKP-----EEQWWNAEDSEG- 177
Query: 82 EYKVGIFPANFVSSIED 98
K G+ P +V
Sbjct: 178 --KRGMIPVPYVEKYRP 192
>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling
protein; 2.01A {Caenorhabditis elegans}
Length = 174
Score = 64.0 bits (155), Expect = 3e-12
Identities = 15/92 (16%), Positives = 32/92 (34%), Gaps = 10/92 (10%)
Query: 2 PPLLDSMEHPYQNEVDSDLLYGNHNRRNHRPDLWRALYDYDAIGLDELSLRRGDIVEVLS 61
P + + H + + ++ + + +L +G+ +E+LS
Sbjct: 90 PDIPALLNHFKMRVLTEA--SLLAAYKKPIIEVVVGTFKFTGERETDLPFEQGERLEILS 147
Query: 62 KDSAISGDVGWWTGKIEGKIEYKVGIFPANFV 93
K + WW + G+ PAN+V
Sbjct: 148 KT-----NQDWWEARNALG---TTGLVPANYV 171
>1mv3_A MYC box dependent interacting protein 1; tumor suppressor,
endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP:
b.34.2.1
Length = 213
Score = 65.1 bits (157), Expect = 3e-12
Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 6/101 (5%)
Query: 2 PPLLDSMEHPYQNEVDSDLLYGNHNRRNHRPDLWRALYDYDAIGLDELSLRRGDIVEVLS 61
++++ V+ G + +A +DY A DEL L+ GD+V V+
Sbjct: 112 AVVVETFPATVNGTVEGGSGAGRLDLPPGFMFKVQAQHDYTATDTDELQLKAGDVVLVIP 171
Query: 62 KDSAISGDVGWWTGKIEG------KIEYKVGIFPANFVSSI 96
+ D GW G E K+E G+FP NF +
Sbjct: 172 FQNPEEQDEGWLMGVKESDWNQHKKLEKCRGVFPENFTERV 212
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase,
CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo
sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A*
2wb8_A
Length = 336
Score = 66.4 bits (161), Expect = 4e-12
Identities = 35/208 (16%), Positives = 60/208 (28%), Gaps = 56/208 (26%)
Query: 117 NKLIFGEAIGEGGFGKVYKGIYEKQEVAIKVAHPNPDENI-------LENVKQEGKLL-- 167
KL E IGEG FG+V++ I + VAIK+ + + E + E +
Sbjct: 20 EKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKE 79
Query: 168 -------WLFDHRNIVSLIGVCL------------------------------QSPKLCL 190
+ L V + +L +
Sbjct: 80 LSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFI 139
Query: 191 VMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSE 250
V+E+ GG + + Q+ + +A + HRDL NVLL +
Sbjct: 140 VLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASL--AVAEASLRFEHRDLHWGNVLLKK 197
Query: 251 PIENEDLQFKTLKITDFGLAREVYKTTH 278
K+ + +
Sbjct: 198 --------TSLKKLHYTLNGKSSTIPSC 217
>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene
homolog (avian)- signaling protein; NMR {Homo sapiens}
PDB: 2lqw_A*
Length = 303
Score = 65.8 bits (159), Expect = 5e-12
Identities = 18/99 (18%), Positives = 30/99 (30%), Gaps = 9/99 (9%)
Query: 2 PPLLDSMEHPYQNEVDSDLLYGNHNRRNHRPDLWRALYDYDAIGLDELSLRRGDIVEVLS 61
P + + + + A L+L GDIV+V
Sbjct: 209 QPQTTTPLPAVSGSPGAAITPLPSTQNGPVFAKAIQKRVPCAYDKTALALEVGDIVKVTR 268
Query: 62 KDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSSIEDIN 100
+ G W G++ G + G+FP V + N
Sbjct: 269 MN-----INGQWEGEVNG----RKGLFPFTHVKIFDPQN 298
Score = 55.8 bits (133), Expect = 1e-08
Identities = 16/84 (19%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 10 HPYQNEVDSDLLYGNHNRRNHRPDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGD 69
Y + + N + R LYD+ ++L ++G+I+ ++ K +
Sbjct: 103 PRYPSPPMGSVSAPNLPTAEDNLEYVRTLYDFPGNDAEDLPFKKGEILVIIEKP-----E 157
Query: 70 VGWWTGKIEGKIEYKVGIFPANFV 93
WW+ + + +VG+ P +V
Sbjct: 158 EQWWSARNKDG---RVGMIPVPYV 178
>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR
{Homo sapiens} PDB: 2js2_A
Length = 67
Score = 60.3 bits (147), Expect = 5e-12
Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 9/66 (13%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
A +DY A EL +++ + + +L S WW + + G P+N+V
Sbjct: 8 IAKWDYTAQQDQELDIKKNERLWLLDD----SKT--WWRVRNAAN---RTGYVPSNYVER 58
Query: 96 IEDINL 101
+ +
Sbjct: 59 KLEHHH 64
>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural
genomics, riken structural genomics/proteomics
initiative, RSGI, protein binding; NMR {Homo sapiens}
SCOP: b.34.2.1
Length = 96
Score = 61.1 bits (148), Expect = 6e-12
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 13/81 (16%)
Query: 24 NHNRRNHRPDLWRALYDYDAI------GLDELSLRRGDIVEVLSKDSAISGDVGWWTGKI 77
+ R + + L A Y Y+ EL L G + V + G++ G++
Sbjct: 9 SKQRYSGKVHLCVARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMD----EDGFYEGEL 64
Query: 78 EGKIEYKVGIFPANFVSSIED 98
+ G+ P+NFV ++D
Sbjct: 65 LDG---QRGLVPSNFVDFVQD 82
>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3,
signaling protein; NMR {Gallus gallus}
Length = 77
Score = 60.2 bits (146), Expect = 7e-12
Identities = 11/52 (21%), Positives = 26/52 (50%), Gaps = 9/52 (17%)
Query: 47 DELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSSIED 98
E+++++GDI+ +L+ + WW ++ + G PA +V ++
Sbjct: 6 REVTMKKGDILTLLNST-----NKDWWKVEVND----RQGFVPAAYVKKLDS 48
>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication,
repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus}
SCOP: b.34.2.1
Length = 63
Score = 59.7 bits (145), Expect = 8e-12
Identities = 11/52 (21%), Positives = 26/52 (50%), Gaps = 9/52 (17%)
Query: 47 DELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSSIED 98
E+++++GDI+ +L+ + WW ++ + G PA +V ++
Sbjct: 4 REVTMKKGDILTLLNST-----NKDWWKVEVNDR----QGFVPAAYVKKLDS 46
>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain,
hormone/growth factor complex; 1.39A {Homo sapiens}
SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A
Length = 108
Score = 60.8 bits (147), Expect = 9e-12
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEG----KIEYKVGIFPAN 91
AL DY A L++ RG +V V SK +W G ++G + ++G FP++
Sbjct: 26 VALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRL--FWGGSVQGDYYGDLAARLGYFPSS 83
Query: 92 FVSSIED 98
V +
Sbjct: 84 IVREDQT 90
>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding,
signaling, HCK SH3 domain, PR binding; 3.45A {Homo
sapiens}
Length = 90
Score = 60.1 bits (146), Expect = 1e-11
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
ALYDY + D+LS ++GD + VL + G+ WW + K G P+N+V+
Sbjct: 7 VALYDYVSWSPDDLSFQKGDQMVVLEES----GE--WWKAR--SLATRKEGYIPSNYVAR 58
Query: 96 IEDINLVS 103
++ S
Sbjct: 59 VDSGGGTS 66
>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction
adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1
d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A
Length = 217
Score = 63.2 bits (153), Expect = 1e-11
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
A YD+ A DELS +RGDI++VL+++ D W+ ++ G K G P N++
Sbjct: 4 IAKYDFKATADDELSFKRGDILKVLNEE----CDQNWYKAELNG----KDGFIPKNYIEM 55
Query: 96 IED 98
Sbjct: 56 KPH 58
Score = 61.2 bits (148), Expect = 7e-11
Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 11/99 (11%)
Query: 2 PPLLDSMEHPYQNEVD--SDLLYGNHNRRNHRPDLWRALYDYDAIGLDELSLRRGDIVEV 59
L + +++ V + + + +P +AL+D+D EL RRGD + V
Sbjct: 126 NSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDPQEDGELGFRRGDFIHV 185
Query: 60 LSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSSIED 98
+ D WW G G + G+FP N+V+ +
Sbjct: 186 MDNS-----DPNWWKGACHG----QTGMFPRNYVTPVNR 215
>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain,
signaling protein; NMR {Homo sapiens}
Length = 72
Score = 58.9 bits (143), Expect = 2e-11
Identities = 15/69 (21%), Positives = 27/69 (39%), Gaps = 9/69 (13%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
A +DY A EL +++ + + +L S WW + K G P+N+V
Sbjct: 11 VAKFDYVAQQEQELDIKKNERLWLLDD----SKS--WWRVRNSMN---KTGFVPSNYVER 61
Query: 96 IEDINLVSS 104
++
Sbjct: 62 KNSARAAAN 70
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil,
cytoplasm, SH3 domain, signaling protein; NMR {Homo
sapiens} PDB: 2rol_A
Length = 68
Score = 58.5 bits (142), Expect = 2e-11
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 9/58 (15%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFV 93
YD+ A ELS+++ D++EVL S WW + + G P N +
Sbjct: 12 LCNYDFQARNSSELSVKQRDVLEVLDD----SRK--WWKVRDPAG---QEGYVPYNIL 60
>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase,
oxidoreductase; HET: CAF; 3.15A {Homo sapiens}
Length = 341
Score = 64.2 bits (155), Expect = 2e-11
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
AL+D+ EL+ + GD++ +LS+ + W G + G GIFP +FV
Sbjct: 178 EALFDFTGNSKLELNFKAGDVIFLLSRI-----NKDWLEGTVRG----ATGIFPLSFVKI 228
Query: 96 IED 98
++D
Sbjct: 229 LKD 231
>1i07_A Epidermal growth factor receptor kinase substrate EPS8;
hormone/growth factor; 1.80A {Mus musculus} SCOP:
b.34.2.1 PDB: 1aoj_A 1i0c_A
Length = 60
Score = 57.6 bits (140), Expect = 4e-11
Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 9/64 (14%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
++ YD+ A ELS+ + D++E+L WW + G P N +
Sbjct: 5 KSKYDFVARNSSELSVMKDDVLEILDDRR------QWWKVRNASG---DSGFVPNNILDI 55
Query: 96 IEDI 99
+
Sbjct: 56 MRTP 59
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative
splicing, coiled coil, cytoplasmic vesicle, endocytosis,
phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Length = 486
Score = 64.0 bits (154), Expect = 5e-11
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 1 MPPLLDSMEHPYQNEVDSDLLYGNHNRRNHRPDLWRALYDYDAIGLDELSLRRGDIVEVL 60
+S + + D + + + RALYDY+ DELS + GD + +
Sbjct: 397 DWSDDESNNPFSSTDANGDSNPFDDDATSGTEVRVRALYDYEGQEHDELSFKAGDELTKM 456
Query: 61 SKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSSIE 97
+ + GW G+++ +VG++PAN+V +I+
Sbjct: 457 EDED----EQGWCKGRLDNG---QVGLYPANYVEAIQ 486
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain,
SH2 domain, SRC homology 3, RAS signaling pathway,
proto- oncogene, phosphorylation; 1.5A {Homo sapiens}
PDB: 2j06_A
Length = 65
Score = 57.4 bits (139), Expect = 5e-11
Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 12/70 (17%)
Query: 30 HRPDLWRALYDYDAIG-LDELSLRRGDIVEVLSKDSAISGDVGWWTGKIE--GKIEYKVG 86
H RA+ Y + DE+S +GD+ V ++ + GW + G
Sbjct: 3 HMRRRVRAILPYTKVPDTDEISFLKGDMFIVHNEL-----EDGWMWVTNLRTD----EQG 53
Query: 87 IFPANFVSSI 96
+ + V +
Sbjct: 54 LIVEDLVEEV 63
>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic
protein NCK2; T-cell receptor, SH3 domain, immunology,
SH2 domain; NMR {Homo sapiens}
Length = 86
Score = 56.0 bits (135), Expect = 3e-10
Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 9/58 (15%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFV 93
A +DY A EL +++ + + +L S WW + + G P+N+V
Sbjct: 35 IAKWDYTAQQDQELDIKKNERLWLLDD----SKT--WWRVR---NAANRTGYVPSNYV 83
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding,
duplication, repeat, SH3 domain, cytoskeleton, metal
binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1
PDB: 1tud_A
Length = 62
Score = 55.1 bits (133), Expect = 3e-10
Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKI 77
ALYDY E+++++GDI+ +L+ + WW ++
Sbjct: 25 LALYDYQEKSPREVTMKKGDILTLLNST-----NKDWWKVEV 61
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3;
transferase, pseudo kinase domain, vaccinia related
kinase, ATP-binding; 2.00A {Homo sapiens}
Length = 352
Score = 59.4 bits (144), Expect = 1e-09
Identities = 39/294 (13%), Positives = 89/294 (30%), Gaps = 75/294 (25%)
Query: 117 NKLIFGEAIGEGGFGKVYKGI----------YEKQEVAIKVAHPNPDENILENVKQ---- 162
+ G +Y+ +KQ+ ++K+ + +N Q
Sbjct: 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAK 101
Query: 163 -----EGKLLWLFDHRNIVSLIGVCLQSPKL-CLVMEYARGGP-LNRVLA--GRKI--RP 211
+ K L+ I + +G + K LV+ G L L + +
Sbjct: 102 PLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLP--SLGRSLQSALDVSPKHVLSER 159
Query: 212 DVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR 271
VL A ++ + + +LH +H ++ + N+ + +++ + + +G A
Sbjct: 160 SVLQ-VACRLLDALEFLHEN---EYVHGNVTAENIFVDPEDQSQ------VTLAGYGFAF 209
Query: 272 EVYKTT----------HMSAAGT--YAWMAPEVIKTSI-------FSKASDVWSYGVVLW 312
Y + G + S+ S+ SD+ S G +
Sbjct: 210 R-YCPSGKHVAYVEGSRSPHEGDLEFI---------SMDLHKGCGPSRRSDLQSLGYCML 259
Query: 313 ELLTGEIPYKSINA--YAVAYG-VAVNKLTLPIPSTC------PQLFKTLMEAC 357
+ L G +P+ + + P C + + ++
Sbjct: 260 KWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVV 313
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino
acid sequence, binding sites, domain, models, molecular;
HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Length = 364
Score = 59.0 bits (143), Expect = 1e-09
Identities = 51/290 (17%), Positives = 97/290 (33%), Gaps = 77/290 (26%)
Query: 122 GEAIGEGGFGKVYKG-------IYEKQEVAIKVAHPN----PDENILENVKQEGKLLWLF 170
G IG+GGFG +Y + +KV + E + + + +
Sbjct: 40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKW 99
Query: 171 DHRNIVSLIGVCLQSPKL--------------CLVMEYARGGP-LNRVLA--GRKIRPDV 213
+ +GV PK ++M+ R G L ++ ++
Sbjct: 100 IRTRKLKYLGV----PKYWGSGLHDKNGKSYRFMIMD--RFGSDLQKIYEANAKRFSRKT 153
Query: 214 LVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREV 273
++ +++I + + Y+H +H D+K+SN+LL+ + + + D+GLA
Sbjct: 154 VLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPD------QVYLVDYGLAYR- 203
Query: 274 YKT--THM--------SAAGTYAWMAPEVIKTSI-------FSKASDVWSYGVVLWELLT 316
Y H GT + SI S+ D+ G + + LT
Sbjct: 204 YCPEGVHKAYAADPKRCHDGTIEFT-------SIDAHNGVAPSRRGDLEILGYCMIQWLT 256
Query: 317 GEIPYKSINAY--AVAYG-VAVNKLTLPIPSTC------PQLFKTLMEAC 357
G +P++ V + + + C P ME
Sbjct: 257 GHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETV 306
>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain,
peptide complex, alternative splicing, disease mutation,
HOST-virus interaction, phosphoprotein, polymorphism;
1.70A {Homo sapiens} PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A
1pks_A 1pkt_A
Length = 83
Score = 53.9 bits (129), Expect = 1e-09
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 12/77 (15%)
Query: 35 WRALYDYDAIGLDELSLRRGDIVEVLSKDSAISG----------DVGWWTGKIEGKIEYK 84
+RALYDY +++ L GDI+ V G ++GW G E E
Sbjct: 8 YRALYDYKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGER- 66
Query: 85 VGIFPANFVSSIEDINL 101
G FP +V I +
Sbjct: 67 -GDFPGTYVEYIGRKKI 82
>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2,
signal transduction, adapter molecule, signaling
protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A
2eyw_A
Length = 230
Score = 57.6 bits (138), Expect = 2e-09
Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 8/92 (8%)
Query: 8 MEHPYQNEVDSDLLYGNHNRRNHRPDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAIS 67
V R + RAL+D++ ++L ++GDI+ + K
Sbjct: 112 DTTTLIEPVSRSRQGSGVILRQEEAEYVRALFDFNGNDEEDLPFKKGDILRIRDKP---- 167
Query: 68 GDVGWWTGKIEGKIEYKVGIFPANFVSSIEDI 99
+ WW + K G+ P +V
Sbjct: 168 -EEQWWNAEDSEG---KRGMIPVPYVEKYRPA 195
>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex,
DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich
sequence, cytoskeleton; 2.10A {Homo sapiens}
Length = 184
Score = 54.7 bits (131), Expect = 6e-09
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
A+Y++ G +LSL+ GD+V + W+ G + K + GIFP +F+
Sbjct: 21 VAIYNFQGSGAPQLSLQIGDVVRIQETCG------DWYRGYLI-KHKMLQGIFPKSFIHI 73
Query: 96 IEDIN 100
E
Sbjct: 74 KEVTV 78
>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus}
SCOP: b.34.2.1
Length = 78
Score = 50.8 bits (121), Expect = 1e-08
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 14/76 (18%)
Query: 26 NRRNHRPDLWR--ALYDYDAI------GLDELSLRRGDIVEVLSKDSAISGDVGWWTGKI 77
+++ + L + +Y I L L GDIVE+ ++ + WW G+
Sbjct: 4 DKKRNELGLPKMEVFQEYYGIPPPPGAFGGFLRLNPGDIVELTKAEA----EHNWWEGRN 59
Query: 78 EGKIEYKVGIFPANFV 93
+VG FP N V
Sbjct: 60 TAT--NEVGWFPCNRV 73
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding,
membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Length = 345
Score = 55.5 bits (134), Expect = 2e-08
Identities = 48/289 (16%), Positives = 93/289 (32%), Gaps = 78/289 (26%)
Query: 122 GEAIGEGGFGKVYKG--IYEKQEVAIKV----AHPNP---DENILENVKQEGKLLWLFDH 172
G+ IG GGFG +Y + ++ A V N E + + +
Sbjct: 42 GKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIE 101
Query: 173 RNIVSLIGVCLQSPKL--------------CLVMEYARGGP-LNRVL-AGRKIRPDVLVD 216
R + +G+ P +VME R G L ++ + ++
Sbjct: 102 RKQLDYLGI----PLFYGSGLTEFKGRSYRFMVME--RLGIDLQKISGQNGTFKKSTVLQ 155
Query: 217 WAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYKT 276
I++ + + Y+H +H D+K++N+LL + + + D+GL+ Y
Sbjct: 156 LGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPD------QVYLADYGLSYR-YCP 205
Query: 277 --THM--------SAAGT--YAWMAPEVIKTSI-------FSKASDVWSYGVVLWELLTG 317
H GT + S+ S+ SDV G + L G
Sbjct: 206 NGNHKQYQENPRKGHNGTIEFT---------SLDAHKGVALSRRSDVEILGYCMLRWLCG 256
Query: 318 EIPYKSINAYAVAYG------VAVNKLTLPIPSTC---PQLFKTLMEAC 357
++P++ VA + ++ + +
Sbjct: 257 KLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCA 305
>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical
protein BAA76854.1, riken structural
genomics/proteomics initiative RSGI; NMR {Homo sapiens}
SCOP: b.34.2.1
Length = 92
Score = 49.6 bits (118), Expect = 6e-08
Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 6/72 (8%)
Query: 27 RRNHRPD-LWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKV 85
+ P+ L++A +++A ++SL GD+V V+ K G W
Sbjct: 11 LARYPPEKLFQAERNFNAAQDLDVSLLEGDLVGVIKK-KDPMGSQNRWLIDNGV----TK 65
Query: 86 GIFPANFVSSIE 97
G ++F+
Sbjct: 66 GFVYSSFLKPYN 77
>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex,
GRB2,VAV, signaling protein/signaling protein complex;
1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A
Length = 70
Score = 48.0 bits (114), Expect = 1e-07
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 12/63 (19%)
Query: 37 ALYDYDAI------GLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPA 90
+Y I L L GDIVE+ ++ + WW G+ +VG FP
Sbjct: 9 VFQEYYGIPPPPGAFGPFLRLNPGDIVELTKAEA----EHNWWEGRNTA--TNEVGWFPC 62
Query: 91 NFV 93
N V
Sbjct: 63 NRV 65
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 53.1 bits (127), Expect = 2e-07
Identities = 64/423 (15%), Positives = 128/423 (30%), Gaps = 175/423 (41%)
Query: 8 MEHPYQNEVDSDL----------LY------GNHNRRNHRPDLW---RALYD-YDAIGLD 47
+ P+ + +S L L GN + D + R LY Y + +
Sbjct: 133 AKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTD------DYFEELRDLYQTYHVL-VG 185
Query: 48 ELSLRRGDIVEVLSKDSAISG-------DVGWWTGKIEGKIEYKVGIFPANFVSSIEDIN 100
+L + + L + + + ++ W +E +++ SI
Sbjct: 186 DLIKFSAETLSELIRTTLDAEKVFTQGLNILEW-------LENPSNTPDKDYLLSIP--- 235
Query: 101 LVSS-VINDVKLVEIDYNKLIFGEAIG----------EGGFGKVYKGIYEKQEVAIKVAH 149
+S +I ++L Y ++ + +G +G G +G+ A+ +A
Sbjct: 236 -ISCPLIGVIQLAH--Y--VVTAKLLGFTPGELRSYLKGATGHS-QGLV----TAVAIAE 285
Query: 150 PNPDENILENVKQEGKLLWLFDHRNIVSLIGV-CLQS-PKLCL---VMEYA--------- 195
+ E+ +V++ + LF IGV C ++ P L ++E +
Sbjct: 286 TDSWESFFVSVRK--AITVLF-------FIGVRCYEAYPNTSLPPSILEDSLENNEGVPS 336
Query: 196 -----RG-----------------------------GPLNRVLAG------------RKI 209
G N V++G RK
Sbjct: 337 PMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKA 396
Query: 210 RPDVLVDWAIQ---------IAEGMNYLHCQAPISL-IHRD-LKSSNVLLSEPIENEDLQ 258
+ +D Q + +L P++ H L ++ L+++ + ++
Sbjct: 397 KAPSGLD---QSRIPFSERKLKFSNRFL----PVASPFHSHLLVPASDLINKDLVKNNVS 449
Query: 259 F--KTLKITDFGLAREVYKT---THMSAAGTYAWMAPEVIKTSIFSKASDVWSYGVVLWE 313
F K ++I VY T + + E I I V WE
Sbjct: 450 FNAKDIQIP-------VYDTFDGSDLRVLSG---SISERIVDCIIRLP--------VKWE 491
Query: 314 LLT 316
T
Sbjct: 492 TTT 494
Score = 51.2 bits (122), Expect = 7e-07
Identities = 56/350 (16%), Positives = 109/350 (31%), Gaps = 130/350 (37%)
Query: 129 GFGKVYKGIYEKQEVAIKV---AHPNPDENILENVKQEGKLLWLFDHRNIVSLIGVCLQS 185
G G +Y+ + A V A D + + G F S++ + + +
Sbjct: 1630 GMGM---DLYKTSKAAQDVWNRA----DNHFKDT---YG-----F------SILDIVINN 1668
Query: 186 PKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSN 245
P + GG G++IR NY ++I +
Sbjct: 1669 PVNLTIHF---GGE-----KGKRIR--------------ENY------SAMIFETIVDGK 1700
Query: 246 VLLSEPIENEDLQFKTLKITDFGLAREVYKTTHMSAAGTYAWMAPEVIKTSIFSKASDVW 305
+ +E I +++ + T + T A + +
Sbjct: 1701 LK-TEKI-FKEINEHSTSYTFRSEKGLLSATQFTQPA--------------LT-----LM 1739
Query: 306 SYGVVLWELL--TGEIPYKSINA------YA--VAY-GVAVNKLTLPIPSTCPQLF---K 351
+E L G IP + A YA + V + I S +F
Sbjct: 1740 EK--AAFEDLKSKGLIPADATFAGHSLGEYAALASLADV------MSIESLVEVVFYRGM 1791
Query: 352 TLMEACWEADSHMRPSFKTILKALN-NIVHSEFIQTPHESFHIM------QDGWRVEI-- 402
T+ A D R ++ I A+N V + F Q E+ + + GW VEI
Sbjct: 1792 TMQVAV-PRDELGRSNYGMI--AINPGRVAASFSQ---EALQYVVERVGKRTGWLVEIVN 1845
Query: 403 -----EQV---------------LHELRVKEKELRSREEELTKAQMQQKL 432
+Q L+ +++++ ++ ++ L+ +++ L
Sbjct: 1846 YNVENQQYVAAGDLRALDTVTNVLNFIKLQKIDIIELQKSLSLEEVEGHL 1895
Score = 40.4 bits (94), Expect = 0.001
Identities = 21/103 (20%), Positives = 45/103 (43%), Gaps = 28/103 (27%)
Query: 36 RALYDYDAIGLDE--------LSLRRGDIVEVLSKDS--AISGDVGWWTGKIEGKIEYKV 85
R + A+ DE +++ G + S+++ + VG TG + +E
Sbjct: 1789 RGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTGWL---VE--- 1842
Query: 86 GIFPANF-------VSS--IEDINLVSSVINDVKLVEIDYNKL 119
N+ V++ + ++ V++V+N +KL +ID +L
Sbjct: 1843 ---IVNYNVENQQYVAAGDLRALDTVTNVLNFIKLQKIDIIEL 1882
Score = 38.1 bits (88), Expect = 0.008
Identities = 25/116 (21%), Positives = 49/116 (42%), Gaps = 28/116 (24%)
Query: 358 WE-ADSHMRPSFK-TILK-ALNN----IVH-----SEFIQTPHES--FHIMQDGWRVEIE 403
W AD+H + ++ +IL +NN +H + I+ + + F + DG +++ E
Sbjct: 1646 WNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRENYSAMIFETIVDG-KLKTE 1704
Query: 404 QVLHELRVKEKEL--RSREEELTKAQMQQ-------KLAEKELRER----EQAVAA 446
++ E+ RS + L+ Q Q K A ++L+ + A A
Sbjct: 1705 KIFKEINEHSTSYTFRSEKGLLSATQFTQPALTLMEKAAFEDLKSKGLIPADATFA 1760
>1u3o_A Huntingtin-associated protein-interacting protein; SH3,
CIS-proline,, signaling protein; NMR {Rattus
norvegicus}
Length = 82
Score = 46.9 bits (111), Expect = 4e-07
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 32 PDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPAN 91
+L L D+ A ELS++ G VE+L + S GW + + + G+ P++
Sbjct: 17 CELTVVLQDFSAAHSSELSIQVGQTVELLERP---SERPGWCLVRTTERSPPQEGLVPSS 73
Query: 92 FV 93
+
Sbjct: 74 TL 75
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta
barrel, beta sandwich, signaling protei; 2.25A {Homo
sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Length = 466
Score = 49.6 bits (118), Expect = 2e-06
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
AL+D+ + EL + GD++EV+ + WW G++ G FPA+FV
Sbjct: 34 EALWDHVTMDDQELGFKAGDVIEVMDAT-----NREWWWGRVADGE----GWFPASFVRL 84
Query: 96 IEDINLVSSVINDV 109
+ + + +
Sbjct: 85 RVNQDEPADDDAPL 98
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase,
N-glycan, COR SH3 domain; 2.61A {Homo sapiens}
Length = 526
Score = 48.3 bits (114), Expect = 4e-06
Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 7/73 (9%)
Query: 27 RRNHRPDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVG 86
A+Y + DE+ + GDI+ V G+ G + G
Sbjct: 437 FGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNH-----WDGYSKGVNRK--LGRTG 489
Query: 87 IFPANFVSSIEDI 99
++P+ V +
Sbjct: 490 LYPSYKVREKIET 502
>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3
domain, structural genomics center for structural
genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A*
1x27_A*
Length = 175
Score = 45.8 bits (108), Expect = 7e-06
Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 8/70 (11%)
Query: 31 RPDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPA 90
+ +L AL+ Y+ +L +G+ + +L + WW + + G P
Sbjct: 11 QDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSG------EWWKAQ--SLTTGQEGFIPF 62
Query: 91 NFVSSIEDIN 100
NFV+ +
Sbjct: 63 NFVAKANSLE 72
>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange
factor, autoinhibition, domain-swapped, cell junction,
cell project endocytosis; 2.40A {Mus musculus} PDB:
3gf9_A
Length = 283
Score = 45.1 bits (107), Expect = 2e-05
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 9/78 (11%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSS 95
+YDY A DEL+ +G I+ VL+K+ D WW G++ G +VG+FP+N+V
Sbjct: 6 IGMYDYTAQNDDELAFSKGQIINVLNKE-----DPDWWKGEVSG----QVGLFPSNYVKL 56
Query: 96 IEDINLVSSVINDVKLVE 113
D++ +D+ L++
Sbjct: 57 TTDMDPSQQWCSDLHLLD 74
>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC,
cell junction, cell membrane, membrane, SH3 domain;
2.80A {Homo sapiens}
Length = 308
Score = 43.3 bits (101), Expect = 1e-04
Identities = 14/63 (22%), Positives = 20/63 (31%), Gaps = 6/63 (9%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKD----SAISGDVGWWTGKIEGK--IEYKVGIFP 89
R ++ + L RGD+ VL G W G+ E + GI P
Sbjct: 8 RTHFELEPSPPSGLGFTRGDVFHVLDTLHPGPGQSHARGGHWLAVRMGRDLREQERGIIP 67
Query: 90 ANF 92
Sbjct: 68 NQS 70
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 41.7 bits (97), Expect = 2e-04
Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 19/74 (25%)
Query: 385 QTPHESFHIMQDGWRVEIEQVLHEL----RVKEKELR------------SREEELTKAQM 428
+ E I + WR E + L EL +V E+E R + E++ K ++
Sbjct: 79 RLTQEPESIRK--WREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSEQVEKNKI 136
Query: 429 QQKLAEKE-LRERE 441
++A+K ++ +
Sbjct: 137 NNRIADKAFYQQPD 150
Score = 32.4 bits (73), Expect = 0.20
Identities = 10/41 (24%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Query: 413 EKE-LRS-REEELTKAQMQQK-LAEKELREREQAVAAREID 450
E E +R REE+ + ++Q+ A K + + + A ++++
Sbjct: 83 EPESIRKWREEQ--RKRLQELDAASKVMEQEWREKAKKDLE 121
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2,
protein structure initiative, midwest center for
structural genomics, MCSG; 2.20A {Eubacterium eligens}
Length = 138
Score = 38.5 bits (89), Expect = 0.001
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 398 WRVEIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAA--REIDVLERE 455
+ + + ++ K+KE+ + EL AQ++ + + KE++E + + + I LE E
Sbjct: 73 AKKMADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKLETE 132
Query: 456 L 456
L
Sbjct: 133 L 133
>1kjw_A Postsynaptic density protein 95; protein-protein interaction,
scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP:
b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A
Length = 295
Score = 39.7 bits (93), Expect = 0.002
Identities = 17/61 (27%), Positives = 23/61 (37%), Gaps = 12/61 (19%)
Query: 36 RALYDYD-----AIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGK--IEGKIEYKVGIF 88
RAL+DYD LS R GD++ V+ D WW + +G
Sbjct: 5 RALFDYDKTKDCGFLSQALSFRFGDVLHVIDAG-----DEEWWQARRVHSDSETDDIGFI 59
Query: 89 P 89
P
Sbjct: 60 P 60
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle
protein; 2.50A {Gallus gallus}
Length = 101
Score = 36.4 bits (84), Expect = 0.003
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 401 EIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAAREIDV--LERELMI 458
+Q+ E + +K+L+ E+E+ K K A+++L + E+ E +V L R + +
Sbjct: 38 RCKQLEEEQQGLQKKLKGTEDEVEKYSESVKEAQEKLEQAEKKATDAEAEVASLNRRIQL 97
Query: 459 I 459
+
Sbjct: 98 V 98
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle
protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Length = 101
Score = 36.4 bits (84), Expect = 0.003
Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 399 RVEIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAAREIDV--LEREL 456
+Q+ ++ EK+LR E+ + + +E L E+ A E +V L R +
Sbjct: 36 EERSKQLEDDIVQLEKQLRVTEDSRDQVLEELHKSEDSLLFAEENAAKAESEVASLNRRI 95
Query: 457 MII 459
++
Sbjct: 96 QLV 98
>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3,
guanylate kinase, phosphorylation-depen cell membrane;
1.60A {Drosophila melanogaster} PDB: 3uat_A*
Length = 292
Score = 36.7 bits (85), Expect = 0.014
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 12/63 (19%)
Query: 36 RALYDYD-----AIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGK--IEGKIEYKVGIF 88
RAL+DYD + L + GDI+ V + D WW + + + ++GI
Sbjct: 9 RALFDYDPNRDDGLPSRGLPFKHGDILHVTNAS-----DDEWWQARRVLGDNEDEQIGIV 63
Query: 89 PAN 91
P+
Sbjct: 64 PSK 66
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein
cargo binding, cargo proteins, motor protein-protein
transport complex; 2.80A {Mus musculus}
Length = 655
Score = 36.8 bits (84), Expect = 0.016
Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 5/66 (7%)
Query: 31 RPDLWRALYDYDAIGLDE---LSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGI 87
R AL D +E LS +GD++ + + GW G E + G
Sbjct: 572 RSKYVVALQDNPNPAGEESGFLSFAKGDLIILDHDTGEQVMNSGWANGINERT--KQRGD 629
Query: 88 FPANFV 93
FP + V
Sbjct: 630 FPTDCV 635
>2qag_C Septin-7; cell cycle, cell division, GTP-binding,
nucleotide-binding, phosphorylation, acetylation,
alternative splicing, coiled coil; HET: GDP GTP; 4.00A
{Homo sapiens}
Length = 418
Score = 36.0 bits (82), Expect = 0.029
Identities = 18/83 (21%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 394 MQDGWRVEIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAAREIDVLE 453
M+ + +++++ + +L+ E EL+ R E++ K Q KEL E+ + + +
Sbjct: 338 MEQVFEMKVKEKVQKLKDSEAELQRRHEQMKKNLEAQH---KELEEKRRQFEDEKANWEA 394
Query: 454 RELMIILQTAGPTPTPHKRGGKF 476
++ ++ Q + T +K+ GK
Sbjct: 395 QQRILEQQNSSRTLEKNKKKGKI 417
Score = 28.2 bits (62), Expect = 7.3
Identities = 12/57 (21%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 402 IEQVLHELRVKEKELRSREEELTKAQMQQKLAEKE--LREREQAVAAREIDVLEREL 456
+ Q+ E R +++ E E+ + + K+ EK L++ E + R + +++ L
Sbjct: 317 LAQMEEERREHVAKMKKMEMEM-EQVFEMKVKEKVQKLKDSEAELQRRH-EQMKKNL 371
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase;
endopeptidase activity, protein kinase activity; HET:
TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A*
2vwb_A*
Length = 540
Score = 35.4 bits (82), Expect = 0.041
Identities = 37/157 (23%), Positives = 55/157 (35%), Gaps = 27/157 (17%)
Query: 122 GEAIGEGGFGKVYKGIYEKQEVAIKVA------HPNPDENI-LENVKQEGKLLWLFDHRN 174
IG+G + + Y +V IK DENI +E + L L
Sbjct: 341 EHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFG 400
Query: 175 IVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLHCQAPI 234
I + + ++M Y G V+ D A +I E + LH
Sbjct: 401 IPAPYIFDVDLDNKRIMMSYINGKLAKDVIEDNL-------DIAYKIGEIVGKLH---KN 450
Query: 235 SLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAR 271
+IH DL +SN + + L I DFGL +
Sbjct: 451 DVIHNDLTTSNFIFDK----------DLYIIDFGLGK 477
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled
coil, alanine, symmetry, axial stagger, BEND,
contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Length = 81
Score = 32.5 bits (74), Expect = 0.046
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 399 RVEIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVA 445
+Q+ EL +K+L+ E+EL K K A+++L ++
Sbjct: 33 EERSKQLEDELVALQKKLKGTEDELDKYSESLKDAQEKLELADKKAT 79
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene
family, nuclear protein, phosphorylation, disease
mutation, polymorphism; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.211.1.1 PDB: 4a63_B
Length = 239
Score = 34.1 bits (79), Expect = 0.079
Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Query: 24 NHNRRNHRPDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEY 83
N + AL+DY+ DEL ++ GD + ++ ++ ++ WW ++
Sbjct: 164 KMGIMNK--GVIYALWDYEPQNDDELPMKEGDCMTIIHREDE--DEIEWWWARLND---- 215
Query: 84 KVGIFPANFVS 94
K G P N +
Sbjct: 216 KEGYVPRNLLG 226
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1
PDB: 2tma_A 2w49_A 2w4u_A
Length = 284
Score = 33.9 bits (77), Expect = 0.099
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 401 EIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAA--REIDVLEREL 456
E+ + +L+ E EL E L AQ + +LAEK+ + E VA+ R I + E EL
Sbjct: 42 ELVSLQKKLKATEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLFEEEL 99
Score = 32.3 bits (73), Expect = 0.33
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 401 EIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAV--AAREIDVLEREL 456
+Q+ EL +K+L++ E+EL K K A+++L E+ A ++ L R +
Sbjct: 35 RSKQLEDELVSLQKKLKATEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRI 92
Score = 31.2 bits (70), Expect = 0.75
Identities = 12/68 (17%), Positives = 27/68 (39%), Gaps = 9/68 (13%)
Query: 398 WRVEIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELR---------EREQAVAARE 448
+ ++ E++ L+S E + K ++ E+E++ E A R
Sbjct: 186 SEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERS 245
Query: 449 IDVLEREL 456
+ LE+ +
Sbjct: 246 VTKLEKSI 253
Score = 31.2 bits (70), Expect = 0.81
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 399 RVEIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAAREIDVLEREL 456
+ E+ + E+E++ ++L +A+ + + AE+ + + E+ ID LE EL
Sbjct: 208 EAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEK-----SIDDLEDEL 260
Score = 30.4 bits (68), Expect = 1.3
Identities = 12/58 (20%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 401 EIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAV--AAREIDVLEREL 456
++ + + E + E+EL Q + K E EL + +A+ A ++++ E++
Sbjct: 21 RADEAEADKKAAEDRSKQLEDELVSLQKKLKATEDELDKYSEALKDAQEKLELAEKKA 78
Score = 28.8 bits (64), Expect = 4.0
Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 401 EIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAA--REIDVLEREL 456
EI+ + +L+ E E +TK + E EL ++ A E+D ++
Sbjct: 224 EIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDM 281
Score = 28.1 bits (62), Expect = 6.3
Identities = 10/58 (17%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Query: 399 RVEIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAAREIDVLEREL 456
+++ E L E + ++ E+ + + + +K+L+ E E+D L
Sbjct: 12 KLDKENALDRADEAEADKKAAEDRSKQLEDELVSLQKKLKATED-----ELDKYSEAL 64
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP
hydrolysis, GDP, GMP, dynamin related, large GTPase
family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens}
SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A*
2bc9_A* 2d4h_A*
Length = 592
Score = 34.2 bits (77), Expect = 0.10
Identities = 19/122 (15%), Positives = 42/122 (34%), Gaps = 8/122 (6%)
Query: 348 QLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQTPH--------ESFHIMQDGWR 399
+F L E ++ ++ L ++ + + +++ ++
Sbjct: 413 VIFSPLEEEVKAGIYSKPGGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMT 472
Query: 400 VEIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAAREIDVLERELMII 459
I Q L KEKE+ + AQ K+ + R+ EQ + +E E +
Sbjct: 473 DAILQTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLT 532
Query: 460 LQ 461
+
Sbjct: 533 EK 534
Score = 28.8 bits (63), Expect = 5.9
Identities = 11/57 (19%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 401 EIEQVLHELRVKEKELRSREEELTKAQMQ-QKLAEKELREREQAVAAREIDVLEREL 456
++Q+ ++ +L +E ++Q Q+ KE ++E + EI L+ ++
Sbjct: 527 HLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTKM 583
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP,
manganese, transferase; HET: ADP; 1.89A {Archaeoglobus
fulgidus} PDB: 1zp9_A* 1ztf_A*
Length = 258
Score = 33.5 bits (76), Expect = 0.11
Identities = 26/165 (15%), Positives = 56/165 (33%), Gaps = 30/165 (18%)
Query: 121 FGEAIGEGGFGKVYKGI----YEKQEVAIKV--------------AHPNPDENILENVKQ 162
G I G V+ + +A+K+ + + ++ +
Sbjct: 51 MGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPK 110
Query: 163 EGKLLWLFDH-RNIVSLIGVCLQSPKL------CLVMEYARGGPLNRVL---AGRKIRPD 212
E +W RN+ + P+ L+ME+ L GR+++
Sbjct: 111 EKVFIWTEKEFRNLERAKEAGVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRELKEL 170
Query: 213 VLVDWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDL 257
+ + E + L+ +A L+H DL N++ + + D+
Sbjct: 171 DVEGIFNDVVENVKRLYQEA--ELVHADLSEYNIMYIDKVYFIDM 213
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight
junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A
3lh5_A
Length = 391
Score = 33.6 bits (76), Expect = 0.14
Identities = 10/47 (21%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 27 RRNHRPDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWW 73
R ++Y+ LS +G++ V+ D+ +G +G W
Sbjct: 101 SDVGDSFYIRTHFEYEKESPYGLSFNKGEVFRVV--DTLYNGKLGSW 145
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp
contractIle protein-transport protein complex; 24.00A
{Gallus gallus}
Length = 1080
Score = 33.9 bits (78), Expect = 0.17
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 401 EIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAAREIDVLEREL 456
EI ++ EL + E ++ EE K + + + EL+E+ + E + L R +
Sbjct: 992 EIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKT-EKEELNRRI 1046
Score = 33.5 bits (77), Expect = 0.19
Identities = 11/64 (17%), Positives = 21/64 (32%), Gaps = 2/64 (3%)
Query: 401 EIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAA--REIDVLERELMI 458
+LR + LR EEE A + ++E+ + + + E +E
Sbjct: 957 TYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADK 1016
Query: 459 ILQT 462
Sbjct: 1017 YKHE 1020
Score = 32.8 bits (75), Expect = 0.36
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 399 RVEIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAAREIDVLEREL 456
+ E EQ++ EL+ + L++ +EEL + Q KE+ E + E LE +L
Sbjct: 1018 KHETEQLVSELKEQNTLLKTEKEELNRRIHDQ---AKEITETMEKKLVEETKQLELDL 1072
Score = 31.6 bits (72), Expect = 0.82
Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Query: 401 EIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAA--REIDVLEREL 456
+ E + + S +EE+ K + + + E + E+ E + L EL
Sbjct: 971 RLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSEL 1028
Score = 30.5 bits (69), Expect = 1.7
Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 401 EIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAA--REIDVLEREL 456
E + +L ++ E + E+L + +++E+E + V + EI L +EL
Sbjct: 943 EYKSLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKEL 1000
Score = 28.2 bits (63), Expect = 8.6
Identities = 11/87 (12%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Query: 365 RPSFKTILKALNNIVHSEFIQTPHESFHIMQDGWRVEIEQVLHELRVKEKELRSREEELT 424
R ++ +L+ +I+ + ++ H + + Q + + ++EL+ + E
Sbjct: 855 RNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRELKKLKIEAR 914
Query: 425 KAQMQQKLA---EKELREREQAVAARE 448
+ +KL E ++ + ++ + +
Sbjct: 915 SVERYKKLHIGLENKIMQLQRKIDEQN 941
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein,
muscle, Z- LINE, actin-binding protein; 2.8A {Homo
sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Length = 476
Score = 32.9 bits (74), Expect = 0.24
Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 394 MQDGWRVEIEQVLHELRVKEKELRSREEELTKAQMQQKLAE-KELREREQAVAAREIDVL 452
+ + + ++L +R L +R E T MQ+KL + ++ R + + +E L
Sbjct: 12 LMEEYERLASELLEWIRRTIPWLENRTPEKTMQAMQKKLEDFRDYRRKHKPPKVQEKCQL 71
Query: 453 EREL 456
E
Sbjct: 72 EINF 75
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell
adhesion; 2.90A {Homo sapiens}
Length = 468
Score = 33.0 bits (74), Expect = 0.27
Identities = 10/53 (18%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Query: 21 LYGNHNRRNHRPDLWRALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWW 73
R ++Y+ LS +G++ V+ D+ +G +G W
Sbjct: 87 YRRIVESDVGDSFYIRTHFEYEKESPYGLSFNKGEVFRVV--DTLYNGKLGSW 137
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic
vesicle, protein transport, transport, vacuole; 2.80A
{Saccharomyces cerevisiae}
Length = 152
Score = 31.8 bits (71), Expect = 0.29
Identities = 9/68 (13%), Positives = 22/68 (32%), Gaps = 10/68 (14%)
Query: 399 RVEIEQVLHELRVKEKELRSREEELTKAQMQQKLAE----------KELREREQAVAARE 448
EI ++ + +K K L ++ + + +L R +E
Sbjct: 81 EQEIRRLKEVIALKNKNTERLNAALISGTIENNVLQQKLSDLKKEHSQLVARWLKKTEKE 140
Query: 449 IDVLEREL 456
+ + E+
Sbjct: 141 TEAMNSEI 148
>2gtj_A FYN-binding protein; SH3, redox, signaling protein; NMR {Homo
sapiens} PDB: 2gto_A
Length = 96
Score = 30.4 bits (68), Expect = 0.32
Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 7/58 (12%)
Query: 36 RALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFV 93
+A D G +ELS ++G+ +E++ G W G+ G V
Sbjct: 32 KACCDVKG-GKNELSFKQGEQIEIIRIT---DNPEGKWLGRTA---RGSYGYIKTTAV 82
>3q0x_A Centriole protein; centrosome protein, coiled coil mediated dimer,
structural P; 3.02A {Chlamydomonas reinhardtii}
Length = 228
Score = 31.7 bits (71), Expect = 0.49
Identities = 16/108 (14%), Positives = 36/108 (33%), Gaps = 6/108 (5%)
Query: 347 PQLFKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQT------PHESFHIMQDGWRV 400
P +L+E C A P F+ +L + ++ PH + V
Sbjct: 105 PGKIISLLEKCILAQPGDSPRFQAVLTIRGGESVFKIVEINDEKQLPHITLAFRPGNDSV 164
Query: 401 EIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAARE 448
+ + L + ++L++ + + +L + Q +A
Sbjct: 165 VKQFLAFRLSEVKGTCHDLSDDLSRTRDDRDSMVAQLAQCRQQLAQLR 212
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin
subfragment 2, heavy meromyosin, essential light chain,
motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP:
i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Length = 1184
Score = 31.7 bits (72), Expect = 0.68
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 399 RVEIEQVLHELRVK----EKELRSREEELTKAQMQQKLAEKELREREQAVAAREIDVLER 454
+ E+E++LHE+ + E+ + + E K Q Q E++L E E A +++ +
Sbjct: 922 KQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAARQKLQLEKVTA 981
Query: 455 ELMI 458
+ I
Sbjct: 982 DGKI 985
Score = 31.3 bits (71), Expect = 0.87
Identities = 12/60 (20%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 398 WRVEIE-QVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAAREIDVLEREL 456
R+E E + +L+ ++K+++ + +L + Q++++ A ++ + E+ A +I +E ++
Sbjct: 934 ARIEEEEERSQQLQAEKKKMQQQMLDLEE-QLEEEEAARQKLQLEKVTADGKIKKMEDDI 992
Score = 30.2 bits (68), Expect = 2.1
Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Query: 399 RVEIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAAREIDVLEREL 456
+ L ++R E + +E+L + + AEK+ R+ E++ L+ EL
Sbjct: 1108 TSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQKRDLS-----EELEALKTEL 1160
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon,
coiled post-transcriptional, gene regulation, chaperone;
HET: EPE; 2.20A {Helicobacter pylori}
Length = 256
Score = 31.2 bits (70), Expect = 0.73
Identities = 11/58 (18%), Positives = 21/58 (36%)
Query: 401 EIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAAREIDVLERELMI 458
EI+ + +R K K+L + E+E + V+ E + + I
Sbjct: 19 EIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKI 76
Score = 30.9 bits (69), Expect = 0.84
Identities = 9/55 (16%), Positives = 22/55 (40%)
Query: 401 EIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAAREIDVLERE 455
E+ + E + ++ E+ Q + K ++ + ++ + E LE E
Sbjct: 91 ELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALELE 145
Score = 28.5 bits (63), Expect = 4.6
Identities = 11/58 (18%), Positives = 23/58 (39%)
Query: 401 EIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAAREIDVLERELMI 458
E + +E+ + + E+ + +Q+ +KE+ E E+ E V I
Sbjct: 98 EEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALELESLVENEVKNI 155
Score = 28.5 bits (63), Expect = 4.7
Identities = 14/67 (20%), Positives = 29/67 (43%), Gaps = 11/67 (16%)
Query: 401 EIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVA-----------AREI 449
++++ L++ K K + + EEE ++Q E+ L++ +A RE+
Sbjct: 33 DLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIKSEREL 92
Query: 450 DVLEREL 456
L E
Sbjct: 93 RSLNIEE 99
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase,
phosphorylation, transferase-antibiotic COMP; HET: ANP
B31; 2.10A {Enterococcus faecalis} PDB: 2b0q_A* 1l8t_A*
3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Length = 263
Score = 31.2 bits (70), Expect = 0.74
Identities = 19/108 (17%), Positives = 40/108 (37%), Gaps = 5/108 (4%)
Query: 123 EAIGEGGFG-KVYKGIYEKQEVAIKVAHPNPDENILENVKQEGKLLWLFDHRNIVSLIGV 181
EG KVYK + E + + +K+ + +++ +LWL + ++
Sbjct: 19 VKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHF 78
Query: 182 CLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMNYLH 229
L+M A G + + P+ +++ AE + H
Sbjct: 79 ERHDGWSNLLMSEADGVLCSEEYEDEQ-SPEKIIE---LYAECIRLFH 122
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus
norvegicus}
Length = 96
Score = 28.7 bits (64), Expect = 1.2
Identities = 8/46 (17%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 413 EKELRSREEELTKAQMQQKLAEKELR--EREQAVAAREIDVLEREL 456
+ + EL + ++++ +EL E+ + V A ++ ++ E
Sbjct: 3 GSDSEQLQRELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEA 48
Score = 27.2 bits (60), Expect = 5.2
Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Query: 401 EIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAAREIDVLEREL 456
+ EQ+ EL+ E +EL + +K+ + L + + A +D E +
Sbjct: 5 DSEQLQRELKELALEEERLIQELEDVEKNRKVVAENLEKVQA--EAERLDQEEAQY 58
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex,
cytoplasm, ribonucleoprotein, structural protein; 3.50A
{Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A
Length = 861
Score = 30.9 bits (69), Expect = 1.4
Identities = 11/52 (21%), Positives = 18/52 (34%)
Query: 399 RVEIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAAREID 450
+ E E+ EL E + E + AE E E +V ++
Sbjct: 696 QSEAEKARKELLELEAMSMAVESTGNAKAEAESRAEAARIEGEGSVLQAKLK 747
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing
cluster, hydrophobic core, contractIle protein; 1.80A
{Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Length = 155
Score = 29.2 bits (65), Expect = 2.0
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
Query: 401 EIEQVLHELRVKEKELRSREEEL--TKAQMQQKLAEKELR----EREQAVAAREIDVLER 454
+ L L + ++ +E++ + KL E E R ER + ID LE
Sbjct: 53 TVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLED 112
Query: 455 EL 456
EL
Sbjct: 113 EL 114
Score = 27.6 bits (61), Expect = 6.6
Identities = 11/53 (20%), Positives = 21/53 (39%)
Query: 403 EQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAAREIDVLERE 455
E + EK + E+EL +++ K +E+++ E V E
Sbjct: 94 EFAERSVTKLEKSIDDLEDELYAQKLKYKAISEEMKQLEDKVEELLSKNYHLE 146
>2enk_A HUEL, solute carrier family 30 member 9; cation transporter,
cobalt, zinc, cadmium, protein of unknown function
DUF993, embryonic LUNG protein; NMR {Homo sapiens}
Length = 101
Score = 28.3 bits (63), Expect = 2.0
Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Query: 387 PHESFHIMQDGWRVEIEQVLHEL----RVKEKELRSREEELTKAQMQQKLAEKELRE 439
PHE R ++E E+ +E + R+E + + + +K LRE
Sbjct: 42 PHEDTESFTVYLRSDVEAKSLEVWGSPEALAREKKLRKEAEIEYRERLFRNQKILRE 98
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn
complex, rRNA processing, transferase; HET: ADP; 1.75A
{Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB:
1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Length = 282
Score = 29.9 bits (67), Expect = 2.1
Identities = 29/142 (20%), Positives = 49/142 (34%), Gaps = 23/142 (16%)
Query: 121 FGEAIGEGGFGKVYKGIYEK-QEVAIKVAHPNPDENILENVKQE-GKLLWLFD------- 171
G+ +GEG V+ EK E +K K++ G L +
Sbjct: 94 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARN 153
Query: 172 -HRNIVSLIGVCLQSPKLC----LVMEYARGGPLNRVLAGRKIRPDVLVDWAIQIAEGMN 226
R + L G+ + ++ME L RV R + + I E +
Sbjct: 154 EFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRV------RVENPDEVLDMILEEVA 207
Query: 227 YLHCQAPISLIHRDLKSSNVLL 248
+ + ++H DL NVL+
Sbjct: 208 KFYHRG---IVHGDLSQYNVLV 226
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil
(dimeric, parallel), familial hypertrophic
cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo
sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Length = 129
Score = 28.3 bits (63), Expect = 3.1
Identities = 11/47 (23%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 412 KEKELRSREEELTKAQMQQKLAEKELR--EREQAVAAREIDVLEREL 456
+EKE+ S +EE T+ + + +E + E + +E + L+ ++
Sbjct: 11 REKEMASMKEEFTRLKEALEKSEARRKELEEKMVSLLQEKNDLQLQV 57
>2zvf_A Alanyl-tRNA synthetase; C-terminal, oligomerization domain,
aminoacyl-tRNA synthetase, ATP-binding, cytoplasm,
ligase, nucleotide-binding; 3.20A {Archaeoglobus
fulgidus}
Length = 171
Score = 28.4 bits (64), Expect = 3.8
Identities = 5/35 (14%), Positives = 13/35 (37%)
Query: 402 IEQVLHELRVKEKELRSREEELTKAQMQQKLAEKE 436
+E+ E + + KE+ + + + E
Sbjct: 34 VERFFEEWKDQRKEIERLKSVIADLWADILMERAE 68
>2xtp_A GTPase IMAP family member 2; immune system, G protein; HET: MSE;
1.50A {Homo sapiens} PDB: 2xto_A* 2xtm_A* 2xtn_A* 3p1j_A
Length = 260
Score = 28.9 bits (64), Expect = 4.4
Identities = 20/157 (12%), Positives = 52/157 (33%), Gaps = 38/157 (24%)
Query: 295 TSIFSKASDVWSYGVVLWELLTG--EIPYKSINAYAVAYGVAVNKLTLPIPSTCPQLFKT 352
IF + D + +VL+ T ++ S+ Y + + +
Sbjct: 130 KEIFGE--DAMGHTIVLF---THKEDLNGGSLMDY--------------MHDSDNKALSK 170
Query: 353 LMEACW---------EADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQDGWRVEIE 403
L+ AC S+ K ++ + +++ + H + + I+
Sbjct: 171 LVAACGGRICAFNNRAEGSNQDDQVKELMDCIEDLLMEK--NGDHYTNGLYS-----LIQ 223
Query: 404 QVLHELRVKEKELRSREEELTKAQMQQKLAEKELRER 440
+ ++ ++ ++ L K M+ + + L E
Sbjct: 224 RSKCGPVGSDERVKEFKQSLIK-YMETQRSYTALAEA 259
>3ok8_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 2;
I-BAR, protein binding; 2.25A {Mus musculus}
Length = 222
Score = 28.6 bits (63), Expect = 4.4
Identities = 18/112 (16%), Positives = 42/112 (37%), Gaps = 14/112 (12%)
Query: 350 FKTLMEACWEADSHMRPSFKTILKALNNIVHSEFIQTPHESFHIMQDGWRVEIEQVLHEL 409
+ L E + R + L+ + H + +Q M+ +++++ +
Sbjct: 70 SQILGEILVQMSDTQR-HLNSDLEVVVQTFHGDLLQH-------MEKNTKLDMQFIKDSC 121
Query: 410 RVKEKELRSREEELTKAQMQ----QKLAEKELREREQAVAAR--EIDVLERE 455
+ E E R R L K + ++ +K RE +++V ++ E
Sbjct: 122 QHYEIEYRHRAANLEKCMSELWRMERKRDKNAREMKESVNRLHAQMQAFVSE 173
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding
mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli}
SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Length = 758
Score = 29.1 bits (66), Expect = 4.7
Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 5/75 (6%)
Query: 380 HSEFIQTPHESFHIMQDGWRVEIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELRE 439
EF+ H ++ + + L V LR E + A +E R+
Sbjct: 21 RHEFMTVEHLLLALLSNP---SAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERD 77
Query: 440 REQAVAAREIDVLER 454
+ ++ + VL+R
Sbjct: 78 TQPTLSFQR--VLQR 90
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding,
nucleotide-binding, phosphorylation, acetylation,
alternative splicing, coiled coil; HET: GDP GTP; 4.00A
{Homo sapiens}
Length = 427
Score = 28.9 bits (64), Expect = 4.8
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 403 EQVLHELRVKEKELRSREEELTKAQMQQKLAEKE--LREREQAVAAREIDVLEREL 456
E + EL+ +EEE+ + Q++ EKE L+E E+ + + D L++
Sbjct: 322 ETYEAKRNEFLGELQKKEEEM-RQMFVQRVKEKEAELKEAEKELHEKF-DRLKKLH 375
Score = 28.6 bits (63), Expect = 6.1
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 401 EIEQVLHELRVKEKELRSREEELTKAQMQQ-KLAEKELREREQA 443
+ + L EL+ KE+E+R + K + + K AEKEL E+
Sbjct: 327 KRNEFLGELQKKEEEMRQMFVQRVKEKEAELKEAEKELHEKFDR 370
Score = 28.2 bits (62), Expect = 7.3
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Query: 407 HELRVKEKELRSREEELTKA--QMQQKLAEKELREREQAVAAREIDVLERELMIILQTAG 464
EL+ EKEL + + L K ++KL +K+ ++ A ++ L AG
Sbjct: 355 AELKEAEKELHEKFDRLKKLHQDEKKKLEDKKKSLDDEVNAFKQRKTAAELLQSQGSQAG 414
Query: 465 PTPTPHKRGGKFN 477
+ T + K N
Sbjct: 415 GSQTLKRDKEKKN 427
>1cii_A Colicin IA; bacteriocin, ION channel formation, transmembrane
protein; 3.00A {Escherichia coli} SCOP: f.1.1.1 h.4.3.1
Length = 602
Score = 28.9 bits (63), Expect = 4.9
Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 401 EIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAAREIDVLEREL 456
+ LR+ +E RS E+ K Q + A+K+ A R +L+ L
Sbjct: 142 MLFADADSLRISPREARSLIEQAEKRQKDAQNADKKA-ADMLAEYERRKGILDTRL 196
Score = 28.5 bits (62), Expect = 7.3
Identities = 10/55 (18%), Positives = 22/55 (40%)
Query: 401 EIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAAREIDVLERE 455
+ + + +L S E L A+ AE++L +++ + I E+
Sbjct: 220 QQTRNDRAISEARNKLSSVTESLNTARNALTRAEQQLTQQKNTPDGKTIVSPEKF 274
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI,
protein structure initi midwest center for structural
genomics; 2.31A {Geobacillus stearothermophilus} SCOP:
c.2.1.5 d.162.1.2
Length = 450
Score = 29.0 bits (64), Expect = 4.9
Identities = 34/253 (13%), Positives = 81/253 (32%), Gaps = 29/253 (11%)
Query: 37 ALYDYDAIGLDELSLRRGDIVEVLSKDSAISGDVGWWTGKIEGKIEYKVGIFPANFVSSI 96
L D + +IV L+K V +I ++ + + A+FV++
Sbjct: 40 WLVDIPE------GKEKLEIVGALAKRMVEKAGVPI---EIHLTLDRRRALDGADFVTTQ 90
Query: 97 EDINLVSSVINDVKLVEIDYNKLIFGEAIGEGGFGKVYKGIYEKQEVAIKVAHPNPDENI 156
+ + + D ++ +I E G GG K + I ++ + PD +
Sbjct: 91 FRVGGLEARAKDERIPL--KYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWL 148
Query: 157 LENVKQEGKLLW-LFDHRNIVSLIGVCLQSPKLCLVMEYARGGPLNRVLAGRKIRPDVLV 215
+ G + + + ++G+C + + + G +
Sbjct: 149 INFTNPAGMVTEAVLRYTKQEKVVGLCNVPIGMRMGVAKLLGVDAD-------------- 194
Query: 216 DWAIQIAEGMNYLHCQAPISLIHRDLKSSNVLLSEPIENEDLQFKTLKITDFGLAREVYK 275
I A G+N++ + L ++ + ++ + I D G + K
Sbjct: 195 RVHIDFA-GLNHMVFGLHVYLDGVEV--TEKVIDLVAHPDRSGVTMKNIVDLGWEPDFLK 251
Query: 276 TTHMSAAGTYAWM 288
+ + +
Sbjct: 252 GLKVLPCPYHRYY 264
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB,
proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR
binding; 6.93A {Bacillus subtilis}
Length = 758
Score = 29.1 bits (66), Expect = 5.0
Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 399 RVEIEQVLHELRVKEKELRSREEELTKAQMQQKLAE-KELREREQAVAAREIDVLERE 455
R+ L+ E++L +E A Q+ + LR+ EQ + +++ ++
Sbjct: 386 RLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLRE-QVEDTKKS 442
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein,
developmental protein, structural protei
phosphorylation, transport, microtubule; 2.10A {Homo
sapiens}
Length = 111
Score = 27.2 bits (60), Expect = 5.7
Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Query: 385 QTPHESFHIMQDGWRVEIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAV 444
Q ++ + + ++E + + L E++L++ + ++ K +RE EQA
Sbjct: 9 QADNQRLKYEVEALKEKLEHQYAQSYKQVSVL---EDDLSQTRAIKEQLHKYVRELEQAN 65
Query: 445 AAREIDVLERE 455
D LER
Sbjct: 66 -----DDLERA 71
>4f61_I Stathmin-like domain R4; alpha-tubulin, beta-tubulin, GTPase,
microtubule, RB3, stath tubulin, cell cycle; HET: GTP
GDP; 4.17A {Artificial gene}
Length = 240
Score = 28.4 bits (62), Expect = 5.8
Identities = 12/63 (19%), Positives = 24/63 (38%)
Query: 395 QDGWRVEIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAAREIDVLER 454
++ E ++ E + +A++ + LAEK ERE A E +
Sbjct: 134 AIEENNNWIKMAKEKLAQKMESNKENRKYQEAELLKHLAEKREHEREVIQRAIEENNNWI 193
Query: 455 ELM 457
++
Sbjct: 194 KMA 196
>3ea1_A 1-phosphatidylinositol phosphodiesterase;
phosphatidylinositol-specific phospholipase C, PI-PLC,
dimer, interfacially impaired; 1.75A {Bacillus
thuringiensis} PDB: 3ea2_A* 3ea3_A 1t6m_A 2or2_A 1gym_A*
1ptd_A 1ptg_A* 7ptd_A 2ptd_A 4ptd_A 3ptd_A 6ptd_A 5ptd_A
Length = 298
Score = 28.2 bits (62), Expect = 6.7
Identities = 7/36 (19%), Positives = 13/36 (36%)
Query: 72 WWTGKIEGKIEYKVGIFPANFVSSIEDINLVSSVIN 107
I+ K +VG ++++ L VI
Sbjct: 255 EIANDIKQKNPTRVGWVIQDYINEKWSPLLYQEVIR 290
>2odr_C Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class
II, ligase; 3.23A {Methanococcus maripaludis}
Length = 701
Score = 28.4 bits (63), Expect = 7.0
Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Query: 408 ELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAAREIDVLERELMIILQTAGP 465
L + + REE +M K EK E + + A++I+ + + P
Sbjct: 12 GLVPRGSHMFKREE---IIEMANKDFEKAWIETKDLIKAKKINESYPRIKPVFGKTHP 66
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil,
alanine, axial stagger, radius, SIDE-chain packing,
crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1
Length = 147
Score = 27.3 bits (60), Expect = 7.6
Identities = 13/51 (25%), Positives = 24/51 (47%)
Query: 408 ELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAAREIDVLERELMI 458
+++ E+EL +E L A + + AEK E E+ + E + E +
Sbjct: 4 RIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKM 54
>2qag_A Septin-2, protein NEDD5; cell cycle, cell division, GTP-binding,
nucleotide-binding, phosphorylation, acetylation,
alternative splicing, coiled coil; HET: GDP GTP; 4.00A
{Homo sapiens}
Length = 361
Score = 28.3 bits (62), Expect = 7.7
Identities = 9/31 (29%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 412 KEKELRSREEELTKAQMQQKLAEKELREREQ 442
K++ L +E EL +MQ+ +A + + + Q
Sbjct: 318 KDQILLEKEAEL--RRMQEMIARMQAQMQMQ 346
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein,
nuclear protein, neurogenesis, cytosk LIS1 binding,
differentiation; 2.24A {Rattus norvegicus}
Length = 189
Score = 27.4 bits (60), Expect = 8.4
Identities = 13/75 (17%), Positives = 27/75 (36%), Gaps = 8/75 (10%)
Query: 396 DGWRVEIEQVLHELRVKEKEL-------RSREEELTKAQMQQKLAEKELREREQAVAARE 448
W+ + + EL R E EL +Q + ++L+ Q + E
Sbjct: 13 AYWKELSMKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQRNRDLQADNQRL-KYE 71
Query: 449 IDVLERELMIILQTA 463
++ L+ +L +
Sbjct: 72 VEALKEKLEHQYAQS 86
Score = 27.4 bits (60), Expect = 8.9
Identities = 9/54 (16%), Positives = 17/54 (31%)
Query: 401 EIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAAREIDVLER 454
E ++ + +EL + Q + E EL + R D+
Sbjct: 11 ETAYWKELSMKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQRNRDLQAD 64
>2b3t_B RF-1, peptide chain release factor 1; translation termination,
methylation, conformational changes; HET: SAH; 3.10A
{Escherichia coli} SCOP: e.38.1.1
Length = 360
Score = 27.9 bits (63), Expect = 8.4
Identities = 11/60 (18%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Query: 401 EIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAAREIDVLERELMIIL 460
++ + + + ++++ + + L +M++ +A+ ELRE ++ + + LE++L ++L
Sbjct: 47 DVSRCFTDWQQVQEDIETAQMMLDDPEMRE-MAQDELREAKE-----KSEQLEQQLQVLL 100
>3qwe_A GMIP, GEM-interacting protein; structural genomics consortium, SGC,
protein binding; 2.40A {Homo sapiens}
Length = 279
Score = 27.9 bits (61), Expect = 8.5
Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 6/93 (6%)
Query: 364 MRPSFKTILKALNNI--VHSEFIQTPHESFHIMQDGWRVEIE----QVLHELRVKEKELR 417
++ + L+ ++ + E + ++ R EIE + + ++K +
Sbjct: 70 LQYIYTLFLEHDLSLGTLAMETVAQQKRDYYQPLAAKRTEIEKWRKEFKEQWMKEQKRMN 129
Query: 418 SREEELTKAQMQQKLAEKELREREQAVAAREID 450
+ L +AQ+Q ++LR R Q
Sbjct: 130 EAVQALRRAQLQYVQRSEDLRARSQGSPEDSAP 162
>2vli_A Antibiotic resistance protein; transferase, tunicamycin,
phosphotransferase; 1.95A {Deinococcus radiodurans}
Length = 183
Score = 27.6 bits (61), Expect = 8.8
Identities = 13/69 (18%), Positives = 17/69 (24%), Gaps = 4/69 (5%)
Query: 409 LRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAAREIDVLERELM----IILQTAG 464
L + R + Q+ E L E ID I G
Sbjct: 111 LIAPLNVVLERLRRDGQPQVNVGTVEDRLNELRGEQFQTHIDTAGLGTQQVAEQIAAQVG 170
Query: 465 PTPTPHKRG 473
T P +G
Sbjct: 171 LTLAPPPQG 179
>2wd5_A Structural maintenance of chromosomes protein 1A; DNA damage, cell
cycle, cell division; 2.70A {Mus musculus}
Length = 233
Score = 27.7 bits (62), Expect = 9.5
Identities = 10/50 (20%), Positives = 24/50 (48%)
Query: 401 EIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQAVAAREID 450
E+E + KEL E+L A++ ++ + ++ R+ E + + +
Sbjct: 2 EVEMAKRRIDEINKELNQVMEQLGDARIDRQESSRQQRKAEIMESIKRLY 51
>1bg1_A Protein (transcription factor STAT3B); protein-DNA complex,
cytokine activation, complex (transcription factor/DNA),
transcription/DNA complex; HET: DNA PTR; 2.25A {Mus
musculus} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 3cwg_A
Length = 596
Score = 27.9 bits (61), Expect = 9.8
Identities = 10/58 (17%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 385 QTPHESFHIMQDGWRVEIEQVLHELRVKEKELRSREEELTKAQMQQKLAEKELREREQ 442
Q H + ++ + + +EQ L ++R + ++L + + + Q K L+ +
Sbjct: 2 QANHPTAAVVTEKQQ-MLEQHLQDVRKRVQDLEQKMKVVENLQDDFDFNYKTLKSQGD 58
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.318 0.135 0.403
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 8,224,077
Number of extensions: 509454
Number of successful extensions: 3389
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1799
Number of HSP's successfully gapped: 565
Length of query: 527
Length of database: 6,701,793
Length adjustment: 98
Effective length of query: 429
Effective length of database: 3,965,535
Effective search space: 1701214515
Effective search space used: 1701214515
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.0 bits)