RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy691
(134 letters)
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 50.5 bits (120), Expect = 2e-10
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 60 FACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTH 110
+ C C KSF+ + +RHM H ++ Y C CGK F L H + H
Sbjct: 4 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 44.0 bits (104), Expect = 6e-08
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 77 RHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
R + +RY C CGK F+ + DL +H RTHTG
Sbjct: 2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37
Score = 24.0 bits (52), Expect = 1.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 60 FACHLCSKSFSLQRLLNRHMKCHS 83
+ C C KSFS L++H + H+
Sbjct: 13 YKCDECGKSFSHSSDLSKHRRTHT 36
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 42.6 bits (101), Expect = 2e-07
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 82 HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
HS K Y C CGK F+ + L +H R HTG
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32
Score = 29.5 bits (67), Expect = 0.012
Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Query: 52 TGRKDNTRFACHLCSKSFSLQRLLNRHMKCHS 83
+G K + C C K+FS +L +H + H+
Sbjct: 3 SGEK---PYGCVECGKAFSRSSILVQHQRVHT 31
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 40.7 bits (96), Expect = 7e-07
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 86 KRYLCTFCGKGFNDTFDLKRHTRTHTG 112
+ ++C C + F LKRH R+HT
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 28.7 bits (65), Expect = 0.022
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 60 FACHLCSKSFSLQRLLNRHMKCHSDVK 86
F C +C+++F+ Q L RH + H++ K
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEK 29
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 40.3 bits (95), Expect = 1e-06
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 86 KRYLCTFCGKGFNDTFDLKRHTRTHTG 112
K + C C + F+ + L H RTHTG
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 28.3 bits (64), Expect = 0.031
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 60 FACHLCSKSFSLQRLLNRHMKCHS 83
F C +C ++FS L H++ H+
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHT 27
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 39.6 bits (93), Expect = 2e-06
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 86 KRYLCTFCGKGFNDTFDLKRHTRTHTG 112
K++ C C K F + L +H +TH
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQN 27
Score = 27.7 bits (62), Expect = 0.056
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 60 FACHLCSKSFSLQRLLNRHMKCHSDVK 86
FAC C K F L++H+K H + K
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTHQNKK 29
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 39.3 bits (92), Expect = 3e-06
Identities = 9/34 (26%), Positives = 14/34 (41%)
Query: 80 KCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGK 113
+ H+ K Y C+ C K F L H + +
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34
Score = 30.4 bits (69), Expect = 0.007
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 60 FACHLCSKSFSLQRLLNRHMKCHSD 84
+AC C K+F ++LL+ H K + D
Sbjct: 9 YACSHCDKTFRQKQLLDMHFKRYHD 33
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 35
Score = 38.2 bits (89), Expect = 7e-06
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 82 HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
S + ++C C F + RH + HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32
Score = 29.3 bits (66), Expect = 0.017
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 60 FACHLCSKSFSLQRLLNRHMKCHSD 84
F C +C +F+ + RH+K H+D
Sbjct: 8 FVCRICLSAFTTKANCARHLKVHTD 32
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 37.0 bits (86), Expect = 2e-05
Identities = 7/35 (20%), Positives = 15/35 (42%)
Query: 78 HMKCHSDVKRYLCTFCGKGFNDTFDLKRHTRTHTG 112
+ + +K + C C + F+ + L H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
Score = 26.6 bits (59), Expect = 0.15
Identities = 11/26 (42%), Positives = 12/26 (46%)
Query: 60 FACHLCSKSFSLQRLLNRHMKCHSDV 85
F C C +SFS L H K H V
Sbjct: 12 FQCPDCDRSFSRSDHLALHRKRHMLV 37
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 36.9 bits (86), Expect = 2e-05
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 86 KRYLCTF--CGKGFNDTFDLKRHTRTHTGK 113
+ Y C C K F DL RH ++H K
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 23.8 bits (52), Expect = 1.8
Identities = 9/26 (34%), Positives = 12/26 (46%), Gaps = 2/26 (7%)
Query: 60 FACH--LCSKSFSLQRLLNRHMKCHS 83
++C C K+F L RH K H
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRHKKSHQ 29
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 36.9 bits (86), Expect = 2e-05
Identities = 14/29 (48%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
Query: 86 KRYLCTF--CGKGFNDTFDLKRHTRTHTG 112
+ ++CT+ CGK F + +L+RH RTHTG
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG 29
Score = 24.2 bits (53), Expect = 1.0
Identities = 10/29 (34%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Query: 60 FACHL--CSKSFSLQRLLNRHMKCHSDVK 86
F C C K F+ L RH + H+ K
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 37.2 bits (86), Expect = 3e-05
Identities = 9/41 (21%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 74 LLNRHMKCHSDVKRYLCTFCGKG--FNDTFDLKRHTRTHTG 112
+++++K K + C F G F ++++ H +TH
Sbjct: 6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE 45
Score = 23.4 bits (50), Expect = 3.5
Identities = 5/22 (22%), Positives = 11/22 (50%)
Query: 62 CHLCSKSFSLQRLLNRHMKCHS 83
C+K+F + + H++ H
Sbjct: 23 FPGCTKTFKRRYNIRSHIQTHL 44
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 30
Score = 36.5 bits (85), Expect = 3e-05
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 86 KRYLCTF--CGKGFNDTFDLKRHTRTHTG 112
K + CTF C K ++ +LK H R+HTG
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG 29
Score = 23.4 bits (51), Expect = 2.3
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 65 CSKSFSLQRLLNRHMKCHS 83
C KS+S L H++ H+
Sbjct: 10 CRKSYSRLENLKTHLRSHT 28
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 36.5 bits (85), Expect = 3e-05
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 86 KRYLCTF--CGKGFNDTFDLKRHTRTHTG 112
+ Y C C + F+ + DL RH R HTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 23.4 bits (51), Expect = 2.4
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 65 CSKSFSLQRLLNRHMKCHS 83
C + FS L RH++ H+
Sbjct: 10 CDRRFSRSADLTRHIRIHT 28
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 36.1 bits (84), Expect = 4e-05
Identities = 9/33 (27%), Positives = 12/33 (36%)
Query: 82 HSDVKRYLCTFCGKGFNDTFDLKRHTRTHTGKE 114
HS K Y C C F + +K H +
Sbjct: 3 HSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 26.1 bits (58), Expect = 0.25
Identities = 4/23 (17%), Positives = 10/23 (43%)
Query: 60 FACHLCSKSFSLQRLLNRHMKCH 82
+ C++C F+ + H+
Sbjct: 9 YECYICHARFTQSGTMKMHILQK 31
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 36.1 bits (84), Expect = 5e-05
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 86 KRYLCTFCGKGFNDTFDLKRHTR-THTG 112
K Y+C CGKGF+ L H + HT
Sbjct: 4 KPYICQSCGKGFSRPDHLNGHIKQVHTS 31
Score = 31.1 bits (71), Expect = 0.004
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 60 FACHLCSKSFSLQRLLNRHMKC-HSDVKRYLC 90
+ C C K FS LN H+K H+ + + C
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 34.9 bits (81), Expect = 1e-04
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 86 KRYLCTFCGKGFNDTFDLKRHTRTHT 111
K Y C CGK F+ L H R HT
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
Score = 25.2 bits (56), Expect = 0.44
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 60 FACHLCSKSFSLQRLLNRHMKCHS 83
+ C C K+FS L H + H+
Sbjct: 3 YKCLECGKAFSQNSGLINHQRIHT 26
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 35.0 bits (81), Expect = 1e-04
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 86 KRYLCTF--CGKGFNDTFDLKRHTRTHT 111
+ Y+C F C K F + +LK H TH
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 23.1 bits (50), Expect = 3.1
Identities = 7/26 (26%), Positives = 12/26 (46%), Gaps = 2/26 (7%)
Query: 60 FACHL--CSKSFSLQRLLNRHMKCHS 83
+ C C+K F+ L H+ H+
Sbjct: 3 YVCPFDGCNKKFAQSTNLKSHILTHA 28
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 34.7 bits (80), Expect = 2e-04
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Query: 86 KRYLCTF--CGKGFNDTFDLKRHTRTHTG 112
K + CTF CGK F+ F+L+ H R HTG
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG 29
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 33.9 bits (78), Expect = 3e-04
Identities = 10/27 (37%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Query: 88 YLCT--FCGKGFNDTFDLKRHTRTHTG 112
+ C CGK FN LK H + H+
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSD 28
Score = 31.2 bits (71), Expect = 0.004
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 60 FACH--LCSKSFSLQRLLNRHMKCHSDVKRYLCTF 92
F+C C KSF+ ++ L HMK HSD + Y+C F
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 32.3 bits (73), Expect = 0.001
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 86 KRYLCTFCGKGFNDTFDLKRHTRTHTGKE 114
K+ C CGK F D + L RH +H+G++
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEK 32
Score = 27.3 bits (60), Expect = 0.11
Identities = 13/28 (46%), Positives = 14/28 (50%)
Query: 61 ACHLCSKSFSLQRLLNRHMKCHSDVKRY 88
AC +C K F LNRH HS K Y
Sbjct: 7 ACEICGKIFRDVYHLNRHKLSHSGEKPY 34
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 31.9 bits (72), Expect = 0.002
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 86 KRYLCTFCGKGFNDTFDLKRHTRTHTGK 113
+ ++C CGK F ++ LKRH HTG+
Sbjct: 1 RVHVCAECGKAFVESSKLKRHQLVHTGE 28
>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 31
Score = 29.6 bits (66), Expect = 0.012
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 85 VKRYLCTF--CGKGFNDTFDLKRHTRTHTGK 113
+KRY+C+F CG +N + L+ H HTG+
Sbjct: 1 MKRYICSFADCGAAYNKNWKLQAHLSKHTGE 31
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 29.4 bits (66), Expect = 0.015
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 86 KRYLCTFCGKGFNDTFDLKRHTRTH 110
K + C CG+ F + + KRHT+ H
Sbjct: 2 KPFACDICGRKFARSDERKRHTKIH 26
Score = 25.9 bits (57), Expect = 0.26
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 60 FACHLCSKSFSLQRLLNRHMKCH 82
FAC +C + F+ RH K H
Sbjct: 4 FACDICGRKFARSDERKRHTKIH 26
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 28
Score = 28.3 bits (63), Expect = 0.036
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 87 RYLCTFCGKGFNDTFDLKRHTRTHTG 112
+Y+C CG LK+H RTHT
Sbjct: 1 KYICEECGIRAKKPSMLKKHIRTHTD 26
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 28.1 bits (63), Expect = 0.056
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 60 FACHLCSKSFSLQRLLNRHMKCH 82
+ C C + F + L HM H
Sbjct: 6 YTCSFCKREFRSAQALGGHMNVH 28
Score = 25.4 bits (56), Expect = 0.42
Identities = 8/33 (24%), Positives = 11/33 (33%)
Query: 86 KRYLCTFCGKGFNDTFDLKRHTRTHTGKEEEEE 118
+ Y C+FC + F L H H
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVHRRDRARLR 36
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 27.3 bits (60), Expect = 0.076
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 90 CTFCGKGFNDTFDLKRHTRTHTG 112
C CGK F+ LK H R HTG
Sbjct: 4 CEVCGKCFSRKDKLKTHMRCHTG 26
Score = 24.6 bits (53), Expect = 0.86
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 62 CHLCSKSFSLQRLLNRHMKCHS 83
C +C K FS + L HM+CH+
Sbjct: 4 CEVCGKCFSRKDKLKTHMRCHT 25
>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 30
Score = 26.6 bits (58), Expect = 0.18
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 86 KRYLCTF--CGKGFNDTFDLKRHTRTHTGK 113
K + C C KGF L RH+ THTG+
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 30
>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId:
8355]}
Length = 26
Score = 25.5 bits (55), Expect = 0.37
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 60 FACHLCSKSFSLQRLLNRHMKCHSD 84
+ C LC +SF + L+RH + H +
Sbjct: 1 YKCGLCERSFVEKSALSRHQRVHKN 25
Score = 23.2 bits (49), Expect = 2.5
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 88 YLCTFCGKGFNDTFDLKRHTRTH 110
Y C C + F + L RH R H
Sbjct: 1 YKCGLCERSFVEKSALSRHQRVH 23
>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 33
Score = 25.5 bits (56), Expect = 0.41
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 90 CTFCGKGFNDTFDLKRHTRTHTG 112
C+ + F + L H R HTG
Sbjct: 10 CSRELRPFKAQYMLVVHMRRHTG 32
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 31
Score = 25.2 bits (55), Expect = 0.52
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Query: 60 FACHLCSKSFSLQRLLNRHM-KCHS 83
+ C LC+++F+ + LL RH K HS
Sbjct: 2 YPCGLCNRAFTRRDLLIRHAQKIHS 26
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 27
Score = 25.0 bits (54), Expect = 0.60
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 90 CTFCGKGFNDTFDLKRHTRTHTGKE 114
C C K F + LK H R HTG++
Sbjct: 3 CPTCHKKFLSKYYLKVHNRKHTGEK 27
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 25.4 bits (56), Expect = 0.96
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 87 RYLCTFCGKGFNDTFDLKRHTRT 109
+ C C + F D+ +LK H R+
Sbjct: 15 LHRCLACARYFIDSTNLKTHFRS 37
>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 53
Score = 25.0 bits (54), Expect = 1.1
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 88 YLCTFCGKGFNDTFDLKRHTRTH 110
C CGK F D L++H H
Sbjct: 7 LPCGLCGKVFTDANRLRQHEAQH 29
>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 37
Score = 24.3 bits (52), Expect = 1.2
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 88 YLCTFCGKGFNDTFDLKRHTRTHTGKEEEEEED 120
++C+ CGK F + RH G + E E+
Sbjct: 5 FVCSKCGKTFTRRNTMARHADNCAGPDGVEGEN 37
Score = 22.0 bits (46), Expect = 7.8
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 58 TRFACHLCSKSFSLQRLLNRH 78
F C C K+F+ + + RH
Sbjct: 3 AAFVCSKCGKTFTRRNTMARH 23
>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 24.3 bits (52), Expect = 1.2
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 85 VKRYLCTFCGKGFNDTFDLKRHTRTHT 111
VK Y C C D+ L +H R H+
Sbjct: 1 VKPYKCKTCDYAAADSSSLNKHLRIHS 27
Score = 22.8 bits (48), Expect = 3.3
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 60 FACHLCSKSFSLQRLLNRHMKCHSD 84
+ C C + + LN+H++ HSD
Sbjct: 4 YKCKTCDYAAADSSSLNKHLRIHSD 28
>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 24.0 bits (51), Expect = 1.5
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 86 KRYLCTFCGKGFNDTFDLKRHTRTHTGKEE 115
K Y C +C D+ +LK H +T KE+
Sbjct: 1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK 30
>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 67
Score = 24.6 bits (53), Expect = 1.6
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 12/37 (32%)
Query: 61 ACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGF 97
AC +CSK FSL +++ C CG F
Sbjct: 7 ACMICSKKFSLLN------------RKHHCRSCGGVF 31
>d2giva1 d.108.1.1 (A:4-274) Probable histone acetyltransferase
MYST1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 271
Score = 25.9 bits (57), Expect = 1.8
Identities = 9/32 (28%), Positives = 12/32 (37%), Gaps = 5/32 (15%)
Query: 88 YLCTFCGKGFNDTFDLKRHT-----RTHTGKE 114
+LC +C K + H R GKE
Sbjct: 32 WLCEYCLKYMKYEKSYRFHLGQCQWRQPPGKE 63
>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 29
Score = 23.7 bits (51), Expect = 2.0
Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 86 KRYLCTF--CGKGFNDTFDLKRHTRTHTG 112
K Y+C C K + D L++H +T G
Sbjct: 1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG 29
>d2cu9a1 b.1.22.1 (A:1-161) Anti-silencing protein 1, ASF1
{Schizosaccharomyces pombe [TaxId: 4896]}
Length = 161
Score = 25.5 bits (56), Expect = 2.1
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 13 EFVNGGHGVKNPLANHDVSAIIPPPPPPTRVEPEKVE 49
EFV G+ V N + ++ + +V+ KV
Sbjct: 106 EFVRVGYYVNNEMEGLNLQEMDDAEIKKVKVDISKVW 142
>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz
{Human (Homo sapiens) [TaxId: 9606]}
Length = 33
Score = 23.5 bits (51), Expect = 2.2
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 86 KRYLCTFCGKGFNDTFDLKRH 106
K YLC FC K L++H
Sbjct: 6 KLYLCEFCLKYMKSRTILQQH 26
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 23.5 bits (50), Expect = 2.4
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 86 KRYLCTFCGKGFNDTFDLKRHTRTHTG 112
+ + C C ++ L H R+HTG
Sbjct: 2 RPFKCQICPYASRNSSQLTVHLRSHTG 28
>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 28
Score = 23.2 bits (49), Expect = 2.5
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 88 YLCTF--CGKGFNDTFDLKRHTRTHT 111
Y+C F CGK F LK H +HT
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHT 27
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 30
Score = 23.2 bits (49), Expect = 2.8
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 88 YLCTFCGKGFNDTFDLKRHTRTHTGK 113
+ C+ C + F +L+ H +HTG+
Sbjct: 5 FTCSVCQETFRRRMELRLHMVSHTGE 30
>d1d2ta_ a.111.1.1 (A:) Bacterial acid phosphatase {Escherichia
blattae [TaxId: 563]}
Length = 224
Score = 25.1 bits (54), Expect = 3.0
Identities = 7/37 (18%), Positives = 13/37 (35%), Gaps = 4/37 (10%)
Query: 29 DVSAIIPPPPPP----TRVEPEKVESTTGRKDNTRFA 61
+ A++PPPP + E ++ R
Sbjct: 20 NSLALLPPPPAVGSIAFLNDQAMYEQGRLLRNTERGK 56
>d1fy7a_ d.108.1.1 (A:) Histone acetyltransferase ESA1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 273
Score = 24.8 bits (54), Expect = 4.1
Identities = 4/21 (19%), Positives = 9/21 (42%)
Query: 88 YLCTFCGKGFNDTFDLKRHTR 108
Y+ F + F +R+ +
Sbjct: 35 YIDDFTLQYFGSKKQYERYRK 55
>d1pi2a_ g.3.13.1 (A:) Bowman-Birk inhibitor, BBI {Soybean
(Glycine max), PI-II [TaxId: 3847]}
Length = 61
Score = 23.3 bits (50), Expect = 4.4
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 64 LCSKSFSLQ-RLLNRHMKCHSDVKRYLCTF 92
+C++S Q +R CHSD K +CT
Sbjct: 10 MCTRSMPPQCSCEDRINSCHSDCKSCMCTR 39
>d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein
Sakura) {Human (Homo sapiens) [TaxId: 9606]}
Length = 51
Score = 23.0 bits (49), Expect = 4.6
Identities = 7/37 (18%), Positives = 11/37 (29%), Gaps = 12/37 (32%)
Query: 61 ACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGF 97
+C C F+ ++ C C K F
Sbjct: 2 SCKSCGAHFANTA------------RKQTCLDCKKNF 26
>d2ozua1 d.108.1.1 (A:507-776) Histone acetyltransferase MYST3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 270
Score = 24.4 bits (53), Expect = 4.8
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 88 YLCTFCGKGFNDTFDLKRH 106
YLC FC K L++H
Sbjct: 32 YLCEFCLKYMKSRTILQQH 50
>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 64
Score = 23.1 bits (49), Expect = 5.2
Identities = 13/53 (24%), Positives = 17/53 (32%), Gaps = 4/53 (7%)
Query: 56 DNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGFNDTFDLKRHTR 108
DN C C K FS+ + +C C C T K+ R
Sbjct: 5 DNEVQNCMACGKGFSVTVRRHHCRQCG----NIFCAECSAKNALTPSSKKPVR 53
>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase
{Thermus thermophilus [TaxId: 274]}
Length = 516
Score = 24.5 bits (52), Expect = 5.5
Identities = 9/38 (23%), Positives = 10/38 (26%), Gaps = 1/38 (2%)
Query: 5 GLPKGVTLEFVNGGHGVKNPLANH-DVSAIIPPPPPPT 41
G P GV G V L H + I
Sbjct: 227 GFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEV 264
>d1vqoz1 g.41.8.1 (Z:10-82) Ribosomal protein L37ae {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 73
Score = 23.1 bits (50), Expect = 5.6
Identities = 3/10 (30%), Positives = 6/10 (60%)
Query: 86 KRYLCTFCGK 95
+ + C CG+
Sbjct: 26 EDHACPNCGE 35
>d1pfva1 a.27.1.1 (A:389-550) Methionyl-tRNA synthetase (MetRS)
{Escherichia coli [TaxId: 562]}
Length = 162
Score = 23.9 bits (51), Expect = 6.3
Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 3/31 (9%)
Query: 19 HGVKNPLANHDVSAIIPPPPPPTRVEPEKVE 49
G++ PL H + P R++ +VE
Sbjct: 125 DGIQQPLLGH---KVNPFKALYNRIDMRQVE 152
>d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 95
Score = 23.5 bits (49), Expect = 6.5
Identities = 9/69 (13%), Positives = 16/69 (23%)
Query: 32 AIIPPPPPPTRVEPEKVESTTGRKDNTRFACHLCSKSFSLQRLLNRHMKCHSDVKRYLCT 91
A + P P P +E E+ T + + K +
Sbjct: 2 AALDPMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEG 61
Query: 92 FCGKGFNDT 100
+ F
Sbjct: 62 AHARSFKIA 70
>d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein
19 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 88
Score = 23.1 bits (49), Expect = 7.6
Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 12/36 (33%)
Query: 62 CHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGF 97
C+ C+ F+L + K Y C CG+ F
Sbjct: 12 CYGCAVKFTLFK------------KEYGCKNCGRAF 35
>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 72
Score = 23.1 bits (49), Expect = 7.6
Identities = 8/37 (21%), Positives = 13/37 (35%), Gaps = 12/37 (32%)
Query: 61 ACHLCSKSFSLQRLLNRHMKCHSDVKRYLCTFCGKGF 97
CH C F+ +++ C CG+ F
Sbjct: 15 VCHRCRVEFTFTN------------RKHHCRNCGQVF 39
>d1jj2y_ g.41.8.1 (Y:) Ribosomal protein L37ae {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 73
Score = 22.7 bits (49), Expect = 8.0
Identities = 4/10 (40%), Positives = 6/10 (60%)
Query: 86 KRYLCTFCGK 95
K++ C CG
Sbjct: 26 KKHKCPVCGF 35
>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 29
Score = 21.6 bits (45), Expect = 9.2
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 65 CSKSFSLQRLLNRHMKCHS 83
C K FSL L RH K H+
Sbjct: 11 CDKRFSLPSRLKRHEKVHA 29
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.136 0.419
Gapped
Lambda K H
0.267 0.0636 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 531,858
Number of extensions: 23579
Number of successful extensions: 208
Number of sequences better than 10.0: 1
Number of HSP's gapped: 205
Number of HSP's successfully gapped: 111
Length of query: 134
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 58
Effective length of database: 1,364,116
Effective search space: 79118728
Effective search space used: 79118728
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 48 (22.5 bits)