Query psy6910
Match_columns 1145
No_of_seqs 867 out of 6236
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 21:36:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6910.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6910hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xkx_A Disks large homolog 4; 100.0 6E-33 2.1E-37 348.5 18.4 232 21-266 307-673 (721)
2 1ex7_A Guanylate kinase; subst 100.0 5.3E-32 1.8E-36 282.0 8.0 145 103-266 4-149 (186)
3 2xkx_A Disks large homolog 4; 100.0 1.2E-28 4.3E-33 309.3 39.3 293 815-1121 56-394 (721)
4 3tvt_A Disks large 1 tumor sup 99.9 4.7E-28 1.6E-32 269.3 7.0 137 120-264 106-243 (292)
5 1kjw_A Postsynaptic density pr 99.9 3.8E-26 1.3E-30 255.6 7.6 133 125-266 114-247 (295)
6 3shw_A Tight junction protein 99.9 5.1E-25 1.7E-29 258.3 12.9 198 22-264 2-335 (468)
7 3tsz_A Tight junction protein 99.9 7E-24 2.4E-28 246.3 14.5 205 17-264 5-343 (391)
8 3ney_A 55 kDa erythrocyte memb 99.9 2.9E-23 9.9E-28 217.5 9.5 128 98-244 17-144 (197)
9 3r0h_A INAD, inactivation-NO-a 99.9 1.2E-21 4.2E-26 208.9 22.2 173 433-678 16-196 (206)
10 3gsl_A Disks large homolog 4; 99.9 1.7E-21 5.9E-26 205.8 22.3 172 434-678 4-190 (196)
11 3gsl_A Disks large homolog 4; 99.9 5.7E-21 2E-25 201.8 22.6 177 920-1120 6-192 (196)
12 3r0h_A INAD, inactivation-NO-a 99.9 1.7E-20 5.9E-25 200.0 22.7 180 813-1005 13-197 (206)
13 2qt5_A Glutamate receptor-inte 99.8 4.4E-20 1.5E-24 195.9 21.1 183 429-678 2-195 (200)
14 2qt5_A Glutamate receptor-inte 99.8 6.8E-20 2.3E-24 194.4 22.4 187 918-1120 6-197 (200)
15 2kxq_A E3 ubiquitin-protein li 99.8 5.4E-21 1.9E-25 173.9 9.7 85 291-375 5-89 (90)
16 3tau_A Guanylate kinase, GMP k 99.8 4E-21 1.4E-25 205.3 8.4 151 96-265 4-154 (208)
17 1tk7_A CG4244-PB; WW domain, n 99.8 5.3E-21 1.8E-25 173.2 7.4 82 290-373 7-88 (88)
18 1p1d_A PDZ45, glutamate recept 99.8 3.4E-19 1.2E-23 188.4 21.4 179 433-678 4-195 (196)
19 1p1d_A PDZ45, glutamate recept 99.8 1.1E-18 3.9E-23 184.4 21.2 181 919-1118 6-195 (196)
20 3a00_A Guanylate kinase, GMP k 99.8 3.6E-20 1.2E-24 194.2 9.2 148 100-266 1-149 (186)
21 2qor_A Guanylate kinase; phosp 99.8 5.2E-19 1.8E-23 188.2 9.5 148 99-265 11-160 (204)
22 1s96_A Guanylate kinase, GMP k 99.7 2.1E-18 7.2E-23 185.1 9.7 149 99-265 15-163 (219)
23 1ueq_A Membrane associated gua 99.7 9.3E-17 3.2E-21 156.3 15.6 114 421-535 5-118 (123)
24 2kpk_A Membrane-associated gua 99.7 4.4E-17 1.5E-21 159.9 13.5 121 422-543 5-125 (129)
25 1kgd_A CASK, peripheral plasma 99.7 1.5E-17 5.2E-22 173.2 9.6 131 99-248 4-134 (180)
26 3gge_A PDZ domain-containing p 99.7 1.7E-16 6E-21 144.0 11.6 88 432-522 2-89 (95)
27 1w9e_A Syntenin 1; cell adhesi 99.7 2.6E-15 8.9E-20 154.1 21.8 159 919-1116 4-164 (166)
28 3suz_A Amyloid beta A4 precurs 99.7 4.5E-17 1.5E-21 189.6 5.9 165 919-1117 204-373 (388)
29 1lvg_A Guanylate kinase, GMP k 99.6 1.4E-16 4.6E-21 168.7 8.4 148 99-265 3-150 (198)
30 1w9e_A Syntenin 1; cell adhesi 99.6 9.1E-15 3.1E-19 150.1 21.4 155 823-1001 8-163 (166)
31 3suz_A Amyloid beta A4 precurs 99.6 1.4E-16 4.7E-21 185.5 7.0 160 824-1002 209-372 (388)
32 3soe_A Membrane-associated gua 99.6 1.5E-15 5.2E-20 143.4 11.8 90 595-684 10-99 (113)
33 1o6w_A PRP40, PRE-mRNA process 99.6 8.1E-16 2.8E-20 135.3 4.6 72 298-374 2-73 (75)
34 3gge_A PDZ domain-containing p 99.6 7.9E-15 2.7E-19 133.2 10.9 85 21-109 5-89 (95)
35 2l5f_A PRE-mRNA-processing fac 99.5 6.6E-15 2.2E-19 134.3 6.9 78 292-374 8-85 (92)
36 3rle_A Golgi reassembly-stacki 99.5 6.7E-14 2.3E-18 149.0 13.9 146 944-1119 16-171 (209)
37 1r6j_A Syntenin 1; PDZ, membra 99.5 5.4E-14 1.8E-18 125.3 10.3 79 21-110 4-82 (82)
38 3lnc_A Guanylate kinase, GMP k 99.5 5.4E-14 1.8E-18 152.3 10.0 147 99-265 26-174 (231)
39 2i04_A Membrane-associated gua 99.5 2.1E-13 7.3E-18 123.3 11.8 84 437-521 2-85 (85)
40 3rle_A Golgi reassembly-stacki 99.5 8.4E-13 2.9E-17 140.6 17.8 155 831-1002 3-168 (209)
41 4a8c_A Periplasmic PH-dependen 99.5 4.3E-13 1.5E-17 158.7 17.2 149 944-1121 263-423 (436)
42 1i16_A Interleukin 16, LCF; cy 99.5 2.2E-13 7.4E-18 133.7 11.4 90 433-523 27-118 (130)
43 1wg6_A Hypothetical protein (r 99.4 9.6E-14 3.3E-18 135.6 7.5 99 425-523 15-122 (127)
44 3soe_A Membrane-associated gua 99.4 4.2E-13 1.4E-17 126.8 11.4 85 432-523 9-93 (113)
45 2q9v_A Membrane-associated gua 99.4 2.2E-13 7.5E-18 124.6 9.1 87 435-522 2-88 (90)
46 2d92_A INAD-like protein; PDZ 99.4 3.6E-13 1.2E-17 127.7 10.6 89 433-522 13-104 (108)
47 1r6j_A Syntenin 1; PDZ, membra 99.4 3.7E-13 1.3E-17 119.9 9.9 75 436-521 5-80 (82)
48 1wi4_A Synip, syntaxin binding 99.4 4.2E-13 1.4E-17 127.4 10.4 88 434-522 14-104 (109)
49 2byg_A Channel associated prot 99.4 5.9E-13 2E-17 128.0 11.6 87 434-522 23-113 (117)
50 3tr0_A Guanylate kinase, GMP k 99.4 2.3E-13 7.9E-18 144.1 9.5 147 99-265 6-152 (205)
51 1d5g_A Human phosphatase HPTP1 99.4 8.7E-13 3E-17 122.2 12.1 88 433-522 3-92 (96)
52 3pv2_A DEGQ; trypsin fold, PDZ 99.4 7.3E-13 2.5E-17 157.0 14.1 146 944-1120 282-445 (451)
53 1uep_A Membrane associated gua 99.4 1.8E-13 6.3E-18 128.5 7.1 90 433-523 7-96 (103)
54 2opg_A Multiple PDZ domain pro 99.4 1.1E-12 3.7E-17 122.1 12.2 88 433-522 2-89 (98)
55 2awx_A Synapse associated prot 99.4 1.1E-12 3.7E-17 123.7 11.9 87 435-523 3-93 (105)
56 2daz_A INAD-like protein; PDZ 99.4 7.6E-13 2.6E-17 128.8 10.8 92 429-522 19-110 (124)
57 2jik_A Synaptojanin-2 binding 99.4 1.5E-12 5.2E-17 121.7 12.2 88 434-523 6-97 (101)
58 2i1n_A Discs, large homolog 3; 99.4 1.1E-12 3.9E-17 122.8 11.3 87 435-523 4-94 (102)
59 1uhp_A Hypothetical protein KI 99.4 1.6E-12 5.4E-17 123.0 12.3 91 433-525 6-103 (107)
60 3b76_A E3 ubiquitin-protein li 99.4 1.1E-12 3.9E-17 126.1 11.4 88 433-522 22-112 (118)
61 1um1_A KIAA1849 protein, RSGI 99.4 1.3E-12 4.6E-17 124.2 11.8 91 430-522 3-95 (110)
62 1wha_A KIAA0147 protein, scrib 99.4 9E-13 3.1E-17 124.3 10.3 89 433-523 5-98 (105)
63 1ufx_A KIAA1526 protein; PDZ d 99.4 5.5E-13 1.9E-17 125.1 8.7 89 436-524 7-98 (103)
64 2fe5_A Presynaptic protein SAP 99.4 1.5E-12 5.1E-17 120.0 11.4 86 435-522 3-92 (94)
65 2jil_A GRIP1 protein, glutamat 99.4 1.3E-12 4.3E-17 121.3 10.8 87 435-523 3-92 (97)
66 3egg_C Spinophilin; PP1, serin 99.4 1.1E-12 3.9E-17 134.2 11.4 88 433-522 78-170 (170)
67 2jxw_A WW domain-binding prote 99.4 9.6E-13 3.3E-17 115.3 8.6 70 298-372 5-74 (75)
68 2r4h_A Membrane-associated gua 99.4 1.8E-12 6.1E-17 123.7 11.2 87 433-522 22-108 (112)
69 1n7e_A AMPA receptor interacti 99.4 2.5E-12 8.5E-17 119.4 11.5 87 434-523 4-90 (97)
70 1wf8_A Neurabin-I; PDZ domain, 99.4 2.3E-12 8E-17 121.9 11.4 90 433-524 7-101 (107)
71 2fne_A Multiple PDZ domain pro 99.4 1.1E-12 3.9E-17 126.0 8.9 88 433-522 23-112 (117)
72 3cbz_A Dishevelled-2; PDZ doma 99.4 1.5E-12 5.2E-17 123.3 9.4 88 435-523 5-96 (108)
73 1v6b_A Harmonin isoform A1; st 99.4 1.3E-12 4.3E-17 126.0 8.9 96 429-525 11-109 (118)
74 1ujd_A KIAA0559 protein; PDZ d 99.4 2.9E-12 9.9E-17 123.3 11.4 90 433-524 10-110 (117)
75 2iwo_A Multiple PDZ domain pro 99.3 1.1E-12 3.8E-17 126.7 8.3 89 433-523 22-113 (120)
76 1wif_A RSGI RUH-020, riken cDN 99.3 1E-12 3.5E-17 127.3 8.1 87 433-523 25-111 (126)
77 3l4h_A E3 ubiquitin-protein li 99.3 6.3E-14 2.2E-18 128.3 -0.6 62 296-376 46-107 (109)
78 1ujv_A Membrane associated gua 99.3 6.8E-12 2.3E-16 116.1 12.9 85 595-679 8-92 (96)
79 2eno_A Synaptojanin-2-binding 99.3 3.6E-12 1.2E-16 123.2 11.5 89 434-524 16-108 (120)
80 1v62_A KIAA1719 protein; struc 99.3 3.1E-12 1.1E-16 123.0 10.7 88 435-524 15-103 (117)
81 1qav_A Alpha-1 syntrophin (res 99.3 2.8E-12 9.4E-17 117.3 9.8 86 434-522 3-89 (90)
82 1wfg_A Regulating synaptic mem 99.3 4.9E-12 1.7E-16 124.1 12.2 88 436-523 28-127 (131)
83 3axa_A Afadin, nectin-3, prote 99.3 3.7E-12 1.3E-16 120.3 10.9 88 433-523 9-98 (106)
84 1q7x_A PDZ2B domain of PTP-BAS 99.3 2E-12 6.8E-17 122.5 9.0 89 433-523 7-102 (108)
85 3o46_A Maguk P55 subfamily mem 99.3 4E-12 1.4E-16 117.0 10.7 85 435-523 4-88 (93)
86 1n7e_A AMPA receptor interacti 99.3 9.8E-12 3.4E-16 115.3 13.3 92 1030-1122 3-94 (97)
87 1uep_A Membrane associated gua 99.3 3.4E-12 1.2E-16 119.8 10.2 92 1030-1122 7-100 (103)
88 2uzc_A Human pdlim5, PDZ and L 99.3 4.6E-12 1.6E-16 115.2 10.7 84 435-523 3-86 (88)
89 2db5_A INAD-like protein; PDZ 99.3 3.6E-12 1.2E-16 124.7 10.6 89 433-523 23-115 (128)
90 4a8c_A Periplasmic PH-dependen 99.3 1.9E-11 6.4E-16 144.6 18.9 145 843-1003 262-419 (436)
91 2qg1_A Multiple PDZ domain pro 99.3 5E-12 1.7E-16 116.0 10.9 84 435-522 4-88 (92)
92 2koj_A Partitioning defective 99.3 7.7E-12 2.6E-16 119.1 12.4 91 433-523 9-101 (111)
93 4amh_A Disks large homolog 1; 99.3 3.8E-12 1.3E-16 120.1 10.2 83 438-522 5-91 (106)
94 2dwv_A Salvador homolog 1 prot 99.3 9.5E-13 3.2E-17 104.2 5.0 46 318-374 1-46 (49)
95 2dkr_A LIN-7 homolog B; LIN-7B 99.3 2.9E-12 1E-16 117.8 9.1 85 435-522 5-89 (93)
96 2ysd_A Membrane-associated gua 99.3 1.9E-12 6.3E-17 105.7 6.7 49 290-345 9-57 (57)
97 2dc2_A GOPC, golgi associated 99.3 3.4E-12 1.2E-16 119.8 9.5 89 433-524 7-96 (103)
98 3i4w_A Disks large homolog 4; 99.3 6.5E-12 2.2E-16 118.1 11.4 87 432-522 8-94 (104)
99 2byg_A Channel associated prot 99.3 6.2E-12 2.1E-16 120.9 11.5 90 1030-1119 22-115 (117)
100 1ihj_A INAD; intermolecular di 99.3 4.7E-12 1.6E-16 117.7 10.3 87 434-522 3-96 (98)
101 4e34_A Golgi-associated PDZ an 99.3 3.6E-12 1.2E-16 115.7 9.1 85 434-521 1-86 (87)
102 2vwr_A Ligand of NUMB protein 99.3 9E-12 3.1E-16 115.1 11.9 85 435-523 3-89 (95)
103 2fne_A Multiple PDZ domain pro 99.3 4.6E-12 1.6E-16 121.8 10.2 90 1030-1119 23-114 (117)
104 2he4_A Na(+)/H(+) exchange reg 99.3 1.2E-11 4.1E-16 113.0 12.5 87 1031-1120 3-89 (90)
105 2i1n_A Discs, large homolog 3; 99.3 1.1E-11 3.7E-16 116.1 12.5 92 1031-1122 3-98 (102)
106 1x5q_A LAP4 protein; PDZ domai 99.3 1.4E-11 4.9E-16 117.0 13.5 92 428-522 8-104 (110)
107 2jik_A Synaptojanin-2 binding 99.3 1E-11 3.5E-16 116.1 12.2 90 1030-1119 5-98 (101)
108 2awx_A Synapse associated prot 99.3 1.1E-11 3.7E-16 116.8 12.3 89 1032-1120 3-95 (105)
109 1wha_A KIAA0147 protein, scrib 99.3 7.9E-12 2.7E-16 117.8 11.3 92 1030-1121 5-101 (105)
110 2opg_A Multiple PDZ domain pro 99.3 1.5E-11 5.2E-16 114.2 13.0 91 1031-1121 3-93 (98)
111 2q9v_A Membrane-associated gua 99.3 6.6E-12 2.3E-16 114.7 10.3 86 1032-1118 2-89 (90)
112 2he4_A Na(+)/H(+) exchange reg 99.3 9.6E-12 3.3E-16 113.6 11.3 83 435-522 4-86 (90)
113 2djt_A Unnamed protein product 99.3 5.2E-12 1.8E-16 118.8 9.8 88 434-523 10-98 (104)
114 2fe5_A Presynaptic protein SAP 99.3 1.3E-11 4.6E-16 113.6 12.3 87 1032-1118 3-93 (94)
115 2ysg_A Syntaxin-binding protei 99.3 1.6E-12 5.5E-17 98.7 4.9 36 292-327 4-39 (40)
116 1ujd_A KIAA0559 protein; PDZ d 99.3 1E-11 3.5E-16 119.4 11.7 93 1031-1123 11-114 (117)
117 1d5g_A Human phosphatase HPTP1 99.3 1.8E-11 6.2E-16 113.2 13.0 90 1030-1119 3-94 (96)
118 2daz_A INAD-like protein; PDZ 99.3 6.9E-12 2.4E-16 121.9 10.5 93 1030-1122 23-115 (124)
119 2g5m_B Neurabin-2; spinophilin 99.3 6.1E-12 2.1E-16 120.2 9.9 87 435-523 4-95 (113)
120 2iwo_A Multiple PDZ domain pro 99.3 6.9E-12 2.4E-16 121.1 10.3 93 1029-1121 21-116 (120)
121 2dm8_A INAD-like protein; PDZ 99.3 3.7E-12 1.3E-16 122.3 8.3 89 433-523 15-103 (116)
122 1i16_A Interleukin 16, LCF; cy 99.3 6.1E-12 2.1E-16 123.4 10.0 91 1029-1119 26-119 (130)
123 2ehr_A INAD-like protein; PDZ 99.3 1.1E-11 3.8E-16 119.2 11.6 90 433-524 13-111 (117)
124 2d92_A INAD-like protein; PDZ 99.3 1E-11 3.5E-16 117.6 11.1 91 1029-1119 12-106 (108)
125 2cs5_A Tyrosine-protein phosph 99.3 6.8E-12 2.3E-16 121.1 10.0 93 430-523 10-106 (119)
126 2la8_A Inactivation-NO-after-p 99.3 1E-11 3.5E-16 117.1 11.0 85 435-525 2-87 (106)
127 2r4h_A Membrane-associated gua 99.3 1.2E-11 4E-16 118.1 11.5 89 1030-1119 22-110 (112)
128 3b76_A E3 ubiquitin-protein li 99.3 1E-11 3.5E-16 119.4 11.1 89 1030-1118 22-113 (118)
129 2jil_A GRIP1 protein, glutamat 99.3 1.3E-11 4.5E-16 114.4 11.5 89 1032-1120 3-94 (97)
130 1wi4_A Synip, syntaxin binding 99.3 1.5E-11 5.2E-16 116.6 11.9 90 1029-1119 12-106 (109)
131 2law_A Yorkie homolog; YAP, SM 99.3 1.5E-12 5.2E-17 97.7 4.0 35 293-327 4-38 (38)
132 2uzc_A Human pdlim5, PDZ and L 99.3 1.6E-11 5.6E-16 111.6 11.7 84 1033-1119 4-87 (88)
133 3pv2_A DEGQ; trypsin fold, PDZ 99.3 1.7E-11 5.9E-16 145.3 15.1 144 844-1003 282-442 (451)
134 3hpk_A Protein interacting wit 99.3 1.4E-11 4.7E-16 120.0 11.8 92 428-522 12-104 (125)
135 1n7t_A 99-MER peptide of densi 99.3 1E-11 3.6E-16 116.5 10.6 88 431-523 7-101 (103)
136 3nfk_A Tyrosine-protein phosph 99.3 5.8E-12 2E-16 119.1 8.9 89 433-522 15-107 (107)
137 1g9o_A NHE-RF; PDZ domain, com 99.3 2.3E-11 7.9E-16 111.3 12.6 83 434-521 2-84 (91)
138 3bpu_A Membrane-associated gua 99.3 1.7E-11 5.7E-16 111.6 11.5 84 434-522 2-85 (88)
139 2i04_A Membrane-associated gua 99.3 2.1E-11 7.2E-16 110.1 12.0 82 1034-1116 2-85 (85)
140 1v62_A KIAA1719 protein; struc 99.3 2E-11 6.7E-16 117.4 12.4 93 1031-1123 14-107 (117)
141 3axa_A Afadin, nectin-3, prote 99.3 2.1E-11 7.3E-16 115.0 12.5 93 1030-1123 9-103 (106)
142 1mfg_A ERB-B2 interacting prot 99.3 1.5E-11 5.1E-16 113.6 11.2 82 436-522 4-92 (95)
143 1ueq_A Membrane associated gua 99.3 4.1E-11 1.4E-15 116.2 14.8 90 1030-1120 17-108 (123)
144 1kwa_A Hcask/LIN-2 protein; PD 99.3 1.2E-11 4.2E-16 112.4 10.3 82 437-523 3-85 (88)
145 1m5z_A GRIP, AMPA receptor int 99.3 2.2E-11 7.5E-16 111.5 12.1 85 433-522 4-90 (91)
146 2q3g_A PDZ and LIM domain prot 99.3 9E-12 3.1E-16 113.6 9.4 83 435-522 3-85 (89)
147 2dc2_A GOPC, golgi associated 99.3 1.1E-11 3.7E-16 116.4 10.2 92 16-111 5-96 (103)
148 2yt7_A Amyloid beta A4 precurs 99.3 1.7E-11 5.9E-16 114.6 11.5 89 435-523 9-99 (101)
149 2jre_A C60-1 PDZ domain peptid 99.3 9.4E-12 3.2E-16 117.9 9.8 89 433-523 10-104 (108)
150 1rgw_A ZAsp protein; PDZ, cyph 99.3 8E-12 2.7E-16 112.8 8.8 82 436-522 2-83 (85)
151 2kxq_A E3 ubiquitin-protein li 99.3 3.2E-12 1.1E-16 116.0 6.2 75 338-412 6-81 (90)
152 2dkr_A LIN-7 homolog B; LIN-7B 99.3 1.5E-11 5.1E-16 113.1 10.8 87 1032-1119 5-91 (93)
153 2kom_A Partitioning defective 99.3 2.2E-11 7.5E-16 117.8 12.4 90 433-522 28-119 (121)
154 1uhp_A Hypothetical protein KI 99.3 3.3E-11 1.1E-15 113.9 13.3 90 1030-1119 6-102 (107)
155 3o46_A Maguk P55 subfamily mem 99.3 1.2E-11 4.3E-16 113.6 10.1 87 20-111 3-89 (93)
156 1x6d_A Interleukin-16; PDZ dom 99.3 1.5E-11 5.1E-16 118.6 11.1 89 433-522 13-102 (119)
157 2ysf_A E3 ubiquitin-protein li 99.3 3.3E-12 1.1E-16 96.9 5.0 35 293-327 5-39 (40)
158 2dlu_A INAD-like protein; PDZ 99.3 1.7E-11 5.9E-16 116.7 11.3 84 435-523 15-98 (111)
159 1wf8_A Neurabin-I; PDZ domain, 99.3 2.1E-11 7.3E-16 115.2 11.9 91 1030-1120 7-102 (107)
160 1kwa_A Hcask/LIN-2 protein; PD 99.3 1.2E-11 4E-16 112.6 9.6 85 21-110 1-85 (88)
161 2vwr_A Ligand of NUMB protein 99.3 3.1E-11 1.1E-15 111.4 12.6 88 1032-1121 3-92 (95)
162 1ufx_A KIAA1526 protein; PDZ d 99.3 1.4E-11 4.7E-16 115.6 10.2 88 1032-1119 6-98 (103)
163 2djy_A SMAD ubiquitination reg 99.3 3E-12 1E-16 98.0 4.6 36 292-327 4-39 (42)
164 1uju_A Scribble; PDZ domain, c 99.3 3.5E-12 1.2E-16 121.5 6.1 86 436-523 10-104 (111)
165 2w4f_A Protein LAP4; structura 99.3 2.5E-11 8.7E-16 112.4 11.8 85 435-522 3-92 (97)
166 2qg1_A Multiple PDZ domain pro 99.3 3.1E-11 1.1E-15 110.7 12.2 86 1032-1119 4-90 (92)
167 3cbz_A Dishevelled-2; PDZ doma 99.3 1.5E-11 5.3E-16 116.4 10.4 90 1031-1120 4-98 (108)
168 4amh_A Disks large homolog 1; 99.3 1.9E-11 6.6E-16 115.3 11.0 83 1037-1119 7-93 (106)
169 2v90_A PDZ domain-containing p 99.3 2E-11 6.9E-16 113.0 10.9 84 436-522 4-88 (96)
170 2q3g_A PDZ and LIM domain prot 99.3 2.1E-11 7.1E-16 111.2 10.8 84 1033-1119 4-87 (89)
171 1g9o_A NHE-RF; PDZ domain, com 99.3 3.9E-11 1.3E-15 109.8 12.7 84 1032-1118 3-86 (91)
172 2pa1_A PDZ and LIM domain prot 99.3 1.9E-11 6.3E-16 111.0 10.4 82 437-523 4-85 (87)
173 2v90_A PDZ domain-containing p 99.3 3E-11 1E-15 111.8 12.0 88 1032-1120 3-91 (96)
174 1qav_A Alpha-1 syntrophin (res 99.3 2.5E-11 8.7E-16 110.8 11.2 85 1032-1117 4-89 (90)
175 1rgw_A ZAsp protein; PDZ, cyph 99.3 1.7E-11 5.9E-16 110.6 9.9 82 1034-1118 3-84 (85)
176 2ejy_A 55 kDa erythrocyte memb 99.3 1.3E-11 4.4E-16 114.1 9.1 86 20-110 11-96 (97)
177 2dm8_A INAD-like protein; PDZ 99.3 2.2E-11 7.6E-16 116.9 11.2 97 1030-1126 15-111 (116)
178 1ujv_A Membrane associated gua 99.3 3E-11 1E-15 111.8 11.6 85 432-523 7-91 (96)
179 2kpk_A Membrane-associated gua 99.2 4.5E-11 1.5E-15 117.0 13.5 90 1029-1119 15-106 (129)
180 2iwn_A Multiple PDZ domain pro 99.2 2.6E-11 8.8E-16 112.3 11.2 87 434-522 3-92 (97)
181 3qe1_A Sorting nexin-27, G pro 99.2 2.4E-11 8.3E-16 114.8 11.2 87 434-523 5-102 (107)
182 2zaj_A Membrane-associated gua 99.2 4.5E-12 1.5E-16 100.1 5.0 39 289-327 7-45 (49)
183 3egg_C Spinophilin; PP1, serin 99.2 2.6E-11 8.7E-16 124.2 12.1 88 1030-1117 78-170 (170)
184 1q7x_A PDZ2B domain of PTP-BAS 99.2 2.5E-11 8.5E-16 115.0 11.1 92 1030-1121 7-105 (108)
185 2qkv_A Inactivation-NO-after-p 99.2 2.1E-11 7.1E-16 112.9 10.3 85 434-524 7-92 (96)
186 1wfv_A Membrane associated gua 99.2 4.7E-12 1.6E-16 118.8 5.9 86 435-523 11-96 (103)
187 2ez5_W Dnedd4, E3 ubiquitin-pr 99.2 5.2E-12 1.8E-16 98.8 5.1 37 292-328 7-43 (46)
188 2f5y_A Regulator of G-protein 99.2 3.5E-11 1.2E-15 110.2 11.5 84 1032-1121 3-86 (91)
189 1wf7_A Enigma homologue protei 99.2 8.5E-12 2.9E-16 117.1 7.5 86 433-523 3-88 (103)
190 1z6g_A Guanylate kinase; struc 99.2 9.4E-12 3.2E-16 133.4 8.9 148 99-265 22-171 (218)
191 1v5q_A GRIP1 homolog, glutamat 99.2 2.5E-11 8.6E-16 117.6 11.0 92 433-524 13-108 (122)
192 1wi2_A Riken cDNA 2700099C19; 99.2 3.4E-11 1.2E-15 113.2 11.6 84 435-523 15-99 (104)
193 3l4f_D SH3 and multiple ankyri 99.2 2.5E-11 8.4E-16 119.2 11.0 86 435-523 27-124 (132)
194 3nfk_A Tyrosine-protein phosph 99.2 2.4E-11 8.4E-16 114.8 10.6 87 1030-1117 15-107 (107)
195 1ihj_A INAD; intermolecular di 99.2 3.4E-11 1.2E-15 111.9 11.3 87 1032-1118 5-97 (98)
196 2ego_A General receptor for ph 99.2 3.1E-11 1.1E-15 111.7 11.0 84 435-522 4-95 (96)
197 2j41_A Guanylate kinase; GMP, 99.2 1.6E-11 5.4E-16 130.1 10.2 149 98-265 4-152 (207)
198 1um1_A KIAA1849 protein, RSGI 99.2 4.7E-11 1.6E-15 113.4 12.5 91 1030-1120 6-98 (110)
199 2vsp_A PDZ domain-containing p 99.2 1.1E-11 3.7E-16 113.6 7.7 83 435-522 3-85 (91)
200 2pa1_A PDZ and LIM domain prot 99.2 4.3E-11 1.5E-15 108.5 11.6 82 1035-1119 5-86 (87)
201 1nf3_C PAR-6B; semi-CRIB motif 99.2 1.3E-11 4.4E-16 120.7 8.7 88 433-522 27-124 (128)
202 2csj_A TJP2 protein; PDZ domai 99.2 1.4E-11 5E-16 118.4 8.9 88 433-524 12-105 (117)
203 2db5_A INAD-like protein; PDZ 99.2 3E-11 1E-15 118.2 11.2 92 1030-1121 23-118 (128)
204 2o2t_A Multiple PDZ domain pro 99.2 1.1E-11 3.6E-16 119.3 7.9 87 434-522 19-109 (117)
205 1x6d_A Interleukin-16; PDZ dom 99.2 6.4E-11 2.2E-15 114.2 13.3 92 1030-1121 13-106 (119)
206 4e34_A Golgi-associated PDZ an 99.2 3.7E-11 1.3E-15 108.9 10.9 83 1032-1116 2-86 (87)
207 1z87_A Alpha-1-syntrophin; pro 99.2 9.9E-12 3.4E-16 135.4 8.4 92 429-523 71-163 (263)
208 2l4j_A YES-associated protein 99.2 6.9E-12 2.4E-16 98.0 5.1 37 291-327 7-43 (46)
209 1i5h_W Rnedd4, ubiquitin ligas 99.2 6.3E-12 2.1E-16 100.1 4.9 39 290-328 6-44 (50)
210 2kyk_A E3 ubiquitin-protein li 99.2 7E-12 2.4E-16 94.9 4.9 36 292-327 3-38 (39)
211 2eno_A Synaptojanin-2-binding 99.2 3.4E-11 1.1E-15 116.4 11.0 91 1030-1120 15-109 (120)
212 3i4w_A Disks large homolog 4; 99.2 5.5E-11 1.9E-15 111.7 12.2 89 1030-1120 9-97 (104)
213 2djt_A Unnamed protein product 99.2 4.5E-11 1.5E-15 112.3 11.6 91 1030-1120 9-100 (104)
214 2dmz_A INAD-like protein; PDZ 99.2 1.8E-11 6.1E-16 119.9 9.1 89 433-523 13-106 (129)
215 2ego_A General receptor for ph 99.2 5.2E-11 1.8E-15 110.2 11.7 84 1032-1117 4-95 (96)
216 1tp5_A Presynaptic density pro 99.2 3.4E-11 1.2E-15 116.1 10.6 88 431-522 10-97 (119)
217 2dlu_A INAD-like protein; PDZ 99.2 7.8E-11 2.7E-15 112.1 12.8 88 1030-1120 13-100 (111)
218 2h2b_A Tight junction protein 99.2 9.6E-11 3.3E-15 110.7 13.2 89 431-523 3-97 (107)
219 2f5y_A Regulator of G-protein 99.2 5.6E-11 1.9E-15 108.8 11.1 81 436-524 4-84 (91)
220 2g5m_B Neurabin-2; spinophilin 99.2 3.4E-11 1.2E-15 115.0 10.0 90 1031-1120 3-97 (113)
221 2vsp_A PDZ domain-containing p 99.2 1.5E-11 5.2E-16 112.6 7.3 85 1032-1119 3-87 (91)
222 1wg6_A Hypothetical protein (r 99.2 3.1E-11 1.1E-15 117.7 9.6 88 1033-1120 26-124 (127)
223 2jmf_A E3 ubiquitin-protein li 99.2 9.9E-12 3.4E-16 100.0 4.9 37 291-327 14-50 (53)
224 2koj_A Partitioning defective 99.2 1.5E-10 5.2E-15 110.1 14.1 94 1030-1123 9-106 (111)
225 3r68_A Na(+)/H(+) exchange reg 99.2 5.6E-11 1.9E-15 109.6 10.8 86 1031-1119 4-89 (95)
226 2vz5_A TAX1-binding protein 3; 99.2 5.7E-11 2E-15 117.7 11.5 89 432-522 20-123 (139)
227 1wi2_A Riken cDNA 2700099C19; 99.2 8.4E-11 2.9E-15 110.5 12.1 87 1030-1119 13-100 (104)
228 3qe1_A Sorting nexin-27, G pro 99.2 9.5E-11 3.2E-15 110.7 12.6 89 1031-1120 5-104 (107)
229 1m5z_A GRIP, AMPA receptor int 99.2 1.1E-10 3.9E-15 106.7 12.7 85 1030-1117 4-90 (91)
230 3r68_A Na(+)/H(+) exchange reg 99.2 4.3E-11 1.5E-15 110.4 9.8 83 435-522 5-87 (95)
231 1va8_A Maguk P55 subfamily mem 99.2 9.2E-11 3.2E-15 112.0 12.4 83 435-523 25-108 (113)
232 2eeg_A PDZ and LIM domain prot 99.2 3.2E-11 1.1E-15 111.2 8.8 82 436-522 9-90 (94)
233 2ehr_A INAD-like protein; PDZ 99.2 9.6E-11 3.3E-15 112.6 12.5 91 1030-1120 13-112 (117)
234 1uju_A Scribble; PDZ domain, c 99.2 1.7E-11 5.7E-16 116.7 7.1 92 1030-1121 7-107 (111)
235 2jxo_A Ezrin-radixin-moesin-bi 99.2 4.3E-11 1.5E-15 111.1 9.7 83 436-522 10-92 (98)
236 1wr3_A Ubiquitin-protein ligas 99.2 1.1E-11 3.9E-16 92.0 4.6 34 294-327 3-36 (36)
237 2d90_A PDZ domain containing p 99.2 8.5E-11 2.9E-15 110.0 11.7 88 1030-1120 4-91 (102)
238 1wfv_A Membrane associated gua 99.2 1.6E-11 5.4E-16 115.2 6.7 93 1030-1123 9-101 (103)
239 2eeg_A PDZ and LIM domain prot 99.2 6E-11 2.1E-15 109.3 10.5 85 1032-1119 8-92 (94)
240 2jre_A C60-1 PDZ domain peptid 99.2 8.1E-11 2.8E-15 111.4 11.5 91 1030-1120 10-106 (108)
241 2kv8_A RGS12, regulator of G-p 99.2 2.1E-11 7.3E-16 109.5 7.1 79 436-522 3-81 (83)
242 1ky9_A Protease DO, DEGP, HTRA 99.2 2.4E-12 8.1E-17 152.5 1.0 154 944-1120 286-442 (448)
243 2kv8_A RGS12, regulator of G-p 99.2 2.4E-11 8.1E-16 109.2 7.4 81 1032-1118 2-82 (83)
244 2ysb_A Salvador homolog 1 prot 99.2 1.4E-11 4.8E-16 97.5 5.1 35 293-327 9-43 (49)
245 2yse_A Membrane-associated gua 99.2 8.8E-12 3E-16 102.4 4.0 41 289-329 7-47 (60)
246 1um7_A Synapse-associated prot 99.2 2.6E-11 9E-16 115.7 7.9 90 429-522 9-98 (113)
247 2pkt_A PDZ and LIM domain prot 99.2 5.5E-11 1.9E-15 108.8 9.7 81 437-522 5-85 (91)
248 2ejy_A 55 kDa erythrocyte memb 99.2 4.6E-11 1.6E-15 110.4 9.2 81 437-522 14-95 (97)
249 1wf7_A Enigma homologue protei 99.2 6.2E-11 2.1E-15 111.2 10.2 88 1031-1121 4-91 (103)
250 1uew_A Membrane associated gua 99.2 1.4E-10 4.9E-15 110.8 12.9 97 1030-1127 8-112 (114)
251 2cs5_A Tyrosine-protein phosph 99.2 6.5E-11 2.2E-15 114.2 10.5 88 1030-1119 13-107 (119)
252 2dls_A PDZ-rhogef, RHO guanine 99.2 1.4E-10 4.8E-15 106.6 12.2 82 433-523 6-87 (93)
253 1nf3_C PAR-6B; semi-CRIB motif 99.2 7.7E-11 2.6E-15 115.2 11.0 91 1029-1119 26-126 (128)
254 2w4f_A Protein LAP4; structura 99.2 1.5E-10 5.2E-15 107.1 12.4 88 1032-1120 3-95 (97)
255 1wr7_A NEDD4-2; all-beta, liga 99.2 1.6E-11 5.3E-16 93.9 4.5 35 293-327 6-40 (41)
256 3sfj_A TAX1-binding protein 3; 99.2 1.2E-10 4.1E-15 109.3 11.6 83 438-522 7-104 (104)
257 2pkt_A PDZ and LIM domain prot 99.2 1.3E-10 4.5E-15 106.3 11.4 84 1034-1120 5-88 (91)
258 2kpz_A E3 ubiquitin-protein li 99.2 1.5E-11 5E-16 97.8 4.2 37 291-327 8-44 (49)
259 1wmv_A WWOX, WW domain contain 99.2 2.1E-11 7.3E-16 98.5 5.2 38 291-328 7-44 (54)
260 2dls_A PDZ-rhogef, RHO guanine 99.2 2.2E-10 7.7E-15 105.2 12.9 83 1030-1119 6-88 (93)
261 3e17_A Tight junction protein 99.2 8E-11 2.7E-15 107.0 9.7 77 437-522 2-80 (88)
262 3l4f_D SH3 and multiple ankyri 99.2 1.3E-10 4.5E-15 114.1 12.0 104 4-111 10-125 (132)
263 2eeh_A PDZ domain-containing p 99.2 1.3E-10 4.4E-15 108.4 11.3 88 433-525 8-96 (100)
264 2d90_A PDZ domain containing p 99.2 6E-11 2E-15 111.1 9.0 83 435-522 6-88 (102)
265 1tk7_A CG4244-PB; WW domain, n 99.2 1.2E-11 4E-16 111.9 4.0 72 339-412 10-82 (88)
266 1q3o_A Shank1; PDZ, GKAP, pept 99.2 1.3E-10 4.3E-15 110.3 11.4 87 435-524 7-105 (109)
267 2gzv_A PRKCA-binding protein; 99.2 1.1E-10 3.9E-15 111.4 11.1 85 435-522 24-109 (114)
268 1x5q_A LAP4 protein; PDZ domai 99.2 2.7E-10 9.2E-15 108.2 13.6 90 1030-1120 13-107 (110)
269 1mfg_A ERB-B2 interacting prot 99.2 1.8E-10 6.1E-15 106.3 11.9 83 1033-1118 4-93 (95)
270 1va8_A Maguk P55 subfamily mem 99.2 2.9E-10 9.8E-15 108.5 13.3 87 1030-1120 23-110 (113)
271 2o2t_A Multiple PDZ domain pro 99.2 6.4E-11 2.2E-15 113.8 8.9 90 1031-1120 19-112 (117)
272 2csj_A TJP2 protein; PDZ domai 99.1 1.2E-10 4E-15 112.0 10.2 89 1030-1120 12-106 (117)
273 3khf_A Microtubule-associated 99.1 1.3E-10 4.4E-15 108.1 10.1 84 1035-1119 5-94 (99)
274 2la8_A Inactivation-NO-after-p 99.1 2.5E-10 8.7E-15 107.5 12.2 83 1033-1119 3-86 (106)
275 3khf_A Microtubule-associated 99.1 8.8E-11 3E-15 109.2 8.8 82 438-522 5-92 (99)
276 1wr4_A Ubiquitin-protein ligas 99.1 3.6E-11 1.2E-15 89.5 4.6 33 294-326 3-35 (36)
277 1uew_A Membrane associated gua 99.1 1.5E-10 5.3E-15 110.6 10.4 86 435-523 10-103 (114)
278 3hpk_A Protein interacting wit 99.1 2.1E-10 7.1E-15 111.6 11.4 90 16-108 14-103 (125)
279 3bpu_A Membrane-associated gua 99.1 2.4E-10 8.1E-15 103.8 10.9 83 1032-1119 3-87 (88)
280 2eeh_A PDZ domain-containing p 99.1 3.1E-10 1E-14 105.8 11.9 86 1031-1119 9-95 (100)
281 1wfg_A Regulating synaptic mem 99.1 2.1E-10 7.2E-15 112.4 11.2 78 1042-1119 47-128 (131)
282 2fcf_A Multiple PDZ domain pro 99.1 2.2E-10 7.5E-15 107.4 10.7 84 437-522 6-98 (103)
283 2dmv_A Itchy homolog E3 ubiqui 99.1 4.6E-11 1.6E-15 92.3 4.9 35 293-327 5-39 (43)
284 1vb7_A PDZ and LIM domain 2; P 99.1 7E-11 2.4E-15 108.8 7.0 76 443-522 13-88 (94)
285 2dwv_A Salvador homolog 1 prot 99.1 3.9E-11 1.3E-15 94.9 4.3 35 293-327 11-45 (49)
286 2dmz_A INAD-like protein; PDZ 99.1 2.4E-10 8.2E-15 111.8 10.9 92 1029-1120 12-108 (129)
287 2eei_A PDZ domain-containing p 99.1 2E-10 6.8E-15 108.3 9.9 88 1030-1120 6-93 (106)
288 1n7t_A 99-MER peptide of densi 99.1 3E-10 1E-14 106.5 10.9 86 1030-1118 9-101 (103)
289 2vsv_A Rhophilin-2; scaffold p 99.1 3.2E-10 1.1E-14 107.1 11.1 82 1032-1119 23-105 (109)
290 2iwn_A Multiple PDZ domain pro 99.1 2.9E-10 9.9E-15 105.2 10.6 88 1032-1119 4-94 (97)
291 2qkv_A Inactivation-NO-after-p 99.1 3.7E-10 1.3E-14 104.4 11.2 85 1030-1118 6-91 (96)
292 1whd_A RGS3, regulator of G-pr 99.1 1.4E-10 4.6E-15 108.2 8.3 83 433-523 13-95 (100)
293 2e7k_A Maguk P55 subfamily mem 99.1 1.2E-10 4.2E-15 106.5 7.9 85 20-111 5-89 (91)
294 1tp5_A Presynaptic density pro 99.1 4.4E-10 1.5E-14 108.3 12.2 92 1030-1123 12-103 (119)
295 3k1r_A Harmonin; protein-prote 99.1 1.6E-10 5.4E-15 121.3 9.7 86 434-524 83-169 (192)
296 1vb7_A PDZ and LIM domain 2; P 99.1 1.4E-10 4.7E-15 106.8 8.2 85 1034-1121 8-92 (94)
297 2fcf_A Multiple PDZ domain pro 99.1 5.5E-10 1.9E-14 104.6 12.4 88 1032-1119 4-100 (103)
298 1v5q_A GRIP1 homolog, glutamat 99.1 4.4E-10 1.5E-14 108.8 12.0 91 1030-1120 13-109 (122)
299 1z87_A Alpha-1-syntrophin; pro 99.1 1.9E-10 6.5E-15 125.3 10.4 91 1030-1122 75-167 (263)
300 1v6b_A Harmonin isoform A1; st 99.1 3.1E-10 1.1E-14 109.2 10.6 87 1032-1119 18-108 (118)
301 2kom_A Partitioning defective 99.1 7.2E-10 2.5E-14 107.1 13.1 89 1030-1118 28-120 (121)
302 2gzv_A PRKCA-binding protein; 99.1 3.9E-10 1.3E-14 107.7 11.1 85 21-108 24-108 (114)
303 2eei_A PDZ domain-containing p 99.1 1E-10 3.6E-15 110.2 7.0 84 435-523 8-91 (106)
304 3kzd_A TIAM-1, T-lymphoma inva 99.1 4.1E-10 1.4E-14 102.7 10.6 82 435-521 6-90 (94)
305 2edp_A Fragment, shroom family 99.1 1.2E-10 4E-15 108.7 7.1 84 436-523 10-94 (100)
306 2e7k_A Maguk P55 subfamily mem 99.1 1.3E-10 4.5E-15 106.3 7.1 80 437-523 8-88 (91)
307 2iwq_A Multiple PDZ domain pro 99.1 3.5E-10 1.2E-14 109.5 10.5 85 437-523 26-119 (123)
308 2yt7_A Amyloid beta A4 precurs 99.1 6.3E-10 2.1E-14 103.9 11.9 89 1030-1118 7-99 (101)
309 1uez_A KIAA1526 protein; PDZ d 99.1 1.6E-10 5.6E-15 107.9 7.8 87 434-525 7-95 (101)
310 3ngh_A PDZ domain-containing p 99.1 2.6E-10 8.8E-15 107.5 9.1 84 1033-1119 2-86 (106)
311 1qau_A Neuronal nitric oxide s 99.1 5.1E-10 1.7E-14 106.6 11.2 84 436-522 2-86 (112)
312 1q3o_A Shank1; PDZ, GKAP, pept 99.1 5.7E-10 1.9E-14 105.7 11.4 91 16-110 2-104 (109)
313 2h2b_A Tight junction protein 99.1 7.2E-10 2.5E-14 104.6 12.0 89 1030-1120 5-99 (107)
314 2jxo_A Ezrin-radixin-moesin-bi 99.1 3.7E-10 1.3E-14 104.8 9.8 86 1031-1119 8-94 (98)
315 3e17_A Tight junction protein 99.1 4.4E-10 1.5E-14 102.1 10.0 78 25-111 4-82 (88)
316 3tsv_A Tight junction protein 99.1 4.3E-10 1.5E-14 109.1 10.6 81 438-522 31-111 (124)
317 2edp_A Fragment, shroom family 99.1 2.6E-10 8.9E-15 106.3 8.7 87 1031-1120 8-96 (100)
318 2vsv_A Rhophilin-2; scaffold p 99.1 4.4E-10 1.5E-14 106.1 10.3 82 435-523 23-104 (109)
319 3ngh_A PDZ domain-containing p 99.1 3.7E-10 1.3E-14 106.4 9.7 81 437-522 3-84 (106)
320 1wif_A RSGI RUH-020, riken cDN 99.1 4.5E-10 1.5E-14 108.7 10.3 85 1030-1118 25-111 (126)
321 1uit_A Human discs large 5 pro 99.1 8.4E-10 2.9E-14 106.0 12.2 89 1031-1123 18-106 (117)
322 1v5l_A PDZ and LIM domain 3; a 99.1 1.1E-10 3.9E-15 109.4 5.8 86 434-524 4-89 (103)
323 1e0m_A Wwprototype; SH3 protot 99.1 1E-10 3.4E-15 87.6 4.2 34 294-327 2-35 (37)
324 3k1r_A Harmonin; protein-prote 99.0 5.1E-10 1.8E-14 117.4 11.0 87 1030-1119 82-169 (192)
325 1whd_A RGS3, regulator of G-pr 99.0 3E-10 1E-14 105.8 8.0 84 1030-1119 13-96 (100)
326 2edv_A FERM and PDZ domain-con 99.0 2.7E-10 9.3E-15 105.3 7.6 84 1030-1120 6-91 (96)
327 1uez_A KIAA1526 protein; PDZ d 99.0 4E-10 1.4E-14 105.2 8.9 89 1030-1121 6-96 (101)
328 1uit_A Human discs large 5 pro 99.0 5.1E-10 1.7E-14 107.5 9.7 83 434-522 18-100 (117)
329 2yuy_A RHO GTPase activating p 99.0 8E-11 2.7E-15 114.7 4.0 84 437-523 10-120 (126)
330 2iwq_A Multiple PDZ domain pro 99.0 1.1E-09 3.6E-14 106.2 11.8 89 1031-1119 23-120 (123)
331 2yuy_A RHO GTPase activating p 99.0 1.3E-10 4.4E-15 113.3 5.1 89 1031-1120 7-122 (126)
332 1ky9_A Protease DO, DEGP, HTRA 99.0 5E-11 1.7E-15 141.2 2.6 155 843-1003 285-439 (448)
333 2d8i_A T-cell lymphoma invasio 99.0 5.2E-10 1.8E-14 106.6 9.2 91 1030-1123 13-106 (114)
334 1y7n_A Amyloid beta A4 precurs 99.0 7.1E-10 2.4E-14 101.1 9.5 74 437-521 15-88 (90)
335 3kzd_A TIAM-1, T-lymphoma inva 99.0 1.1E-09 3.7E-14 100.0 10.6 82 1032-1116 6-90 (94)
336 2vz5_A TAX1-binding protein 3; 99.0 9.1E-10 3.1E-14 109.0 11.1 90 1030-1120 21-126 (139)
337 1v5l_A PDZ and LIM domain 3; a 99.0 3.4E-10 1.2E-14 106.1 7.5 85 1034-1121 7-91 (103)
338 2edv_A FERM and PDZ domain-con 99.0 2.9E-10 9.9E-15 105.1 6.9 81 434-523 7-89 (96)
339 4dey_A Voltage-dependent L-typ 99.0 1.6E-11 5.3E-16 136.6 -2.1 117 132-263 164-283 (337)
340 2ysd_A Membrane-associated gua 99.0 3.4E-10 1.2E-14 92.4 6.4 40 337-376 10-49 (57)
341 2kjd_A Sodium/hydrogen exchang 99.0 8E-10 2.7E-14 107.9 9.9 83 436-522 10-92 (128)
342 3l4h_A E3 ubiquitin-protein li 99.0 2E-10 6.8E-15 105.2 4.9 38 291-328 68-105 (109)
343 3sfj_A TAX1-binding protein 3; 99.0 1.6E-09 5.4E-14 101.7 11.1 73 1044-1117 20-104 (104)
344 1um7_A Synapse-associated prot 99.0 4.7E-10 1.6E-14 107.0 7.4 90 1030-1121 13-102 (113)
345 1y7n_A Amyloid beta A4 precurs 99.0 2E-09 6.9E-14 98.1 11.2 75 1034-1117 15-89 (90)
346 2ysh_A GAS-7, growth-arrest-sp 99.0 3.1E-10 1.1E-14 86.4 4.7 35 293-327 5-39 (40)
347 2ho2_A Fe65 protein, amyloid b 99.0 2.8E-10 9.7E-15 84.6 4.3 33 294-327 2-34 (38)
348 2law_A Yorkie homolog; YAP, SM 99.0 2.6E-10 8.8E-15 85.6 4.1 35 339-373 4-38 (38)
349 1x5n_A Harmonin; PDZ domain, u 99.0 1.3E-09 4.3E-14 104.2 10.1 84 434-522 14-98 (114)
350 2lob_A Golgi-associated PDZ an 98.5 4.8E-11 1.6E-15 113.6 0.0 87 18-107 24-110 (112)
351 2lob_A Golgi-associated PDZ an 98.5 5E-11 1.7E-15 113.5 0.0 82 436-520 28-110 (112)
352 2z17_A Pleckstrin homology SEC 99.0 8.2E-10 2.8E-14 103.7 8.3 83 21-107 15-104 (104)
353 2ysg_A Syntaxin-binding protei 99.0 4.3E-10 1.5E-14 85.4 5.0 36 339-374 5-40 (40)
354 2qbw_A PDZ-fibronectin fusion 99.0 1.3E-09 4.4E-14 114.6 10.3 73 446-522 2-81 (195)
355 2edz_A PDZ domain-containing p 99.0 1E-09 3.5E-14 104.9 8.6 85 1032-1119 13-98 (114)
356 2djy_A SMAD ubiquitination reg 99.0 5.1E-10 1.8E-14 85.6 5.1 37 339-375 5-41 (42)
357 1b8q_A Protein (neuronal nitri 99.0 6.6E-10 2.3E-14 108.3 7.3 85 435-522 8-93 (127)
358 2ysf_A E3 ubiquitin-protein li 99.0 5.1E-10 1.7E-14 84.9 5.0 35 339-373 5-39 (40)
359 1ymz_A CC45; artificial protei 99.0 3.9E-10 1.3E-14 87.3 4.5 36 292-327 5-40 (43)
360 3shw_A Tight junction protein 99.0 1.3E-09 4.3E-14 128.1 10.6 82 436-522 2-83 (468)
361 1uf1_A KIAA1526 protein; PDZ d 99.0 2.9E-09 9.9E-14 103.9 11.4 86 433-523 18-104 (128)
362 2l4j_A YES-associated protein 98.9 7.6E-10 2.6E-14 86.5 5.6 38 338-375 8-45 (46)
363 1qau_A Neuronal nitric oxide s 98.9 4.6E-09 1.6E-13 99.9 12.1 85 1033-1120 2-89 (112)
364 2ysc_A Amyloid beta A4 precurs 98.9 4.9E-10 1.7E-14 83.9 4.1 34 292-326 5-38 (39)
365 2d8i_A T-cell lymphoma invasio 98.9 9.7E-10 3.3E-14 104.7 7.3 84 434-522 14-100 (114)
366 2kjd_A Sodium/hydrogen exchang 98.9 2.6E-09 8.8E-14 104.3 10.3 88 1030-1120 7-95 (128)
367 2ez5_W Dnedd4, E3 ubiquitin-pr 98.9 8.7E-10 3E-14 86.2 5.4 37 338-374 7-43 (46)
368 2zaj_A Membrane-associated gua 98.9 7.2E-10 2.5E-14 87.5 5.0 36 339-374 11-46 (49)
369 2yse_A Membrane-associated gua 98.9 3.4E-10 1.2E-14 92.9 3.2 42 339-380 11-52 (60)
370 1jmq_A YAP65, 65 kDa YES-assoc 98.9 3E-10 1E-14 89.3 2.7 36 293-328 6-41 (46)
371 1vae_A Rhophilin 2, rhophilin, 98.9 9.2E-10 3.1E-14 104.5 6.3 82 1033-1120 16-98 (111)
372 2z17_A Pleckstrin homology SEC 98.9 2.6E-09 8.9E-14 100.2 9.3 82 1032-1114 15-103 (104)
373 3cyy_A Tight junction protein 98.9 4.6E-09 1.6E-13 96.1 10.7 79 435-522 2-82 (92)
374 1x5n_A Harmonin; PDZ domain, u 98.9 5.1E-09 1.8E-13 99.9 11.4 87 1030-1119 13-101 (114)
375 2ysb_A Salvador homolog 1 prot 98.9 1.1E-09 3.6E-14 86.7 5.4 39 336-374 6-44 (49)
376 2eaq_A LIM domain only protein 98.9 1.8E-09 6.3E-14 98.4 7.5 81 437-522 5-88 (90)
377 1wr7_A NEDD4-2; all-beta, liga 98.9 1.1E-09 3.7E-14 83.6 5.0 35 339-373 6-40 (41)
378 1wr3_A Ubiquitin-protein ligas 98.9 1E-09 3.5E-14 81.5 4.5 34 340-373 3-36 (36)
379 1wmv_A WWOX, WW domain contain 98.9 1.5E-09 5.1E-14 87.7 5.6 40 337-376 7-46 (54)
380 3kfv_A Tight junction protein 98.9 3.4E-10 1.2E-14 125.6 2.4 101 120-263 151-251 (308)
381 2jmf_A E3 ubiquitin-protein li 98.9 1.3E-09 4.4E-14 87.6 5.1 38 337-374 14-51 (53)
382 3tsv_A Tight junction protein 98.9 7.4E-09 2.5E-13 100.3 11.5 84 1033-1121 30-115 (124)
383 2rcz_A Tight junction protein 98.9 5.2E-09 1.8E-13 93.1 9.7 69 445-522 12-80 (81)
384 2kyk_A E3 ubiquitin-protein li 98.9 1.3E-09 4.3E-14 82.4 4.6 35 340-374 5-39 (39)
385 1vae_A Rhophilin 2, rhophilin, 98.9 1.5E-09 5E-14 103.1 6.2 82 437-525 17-98 (111)
386 1i5h_W Rnedd4, ubiquitin ligas 98.9 1.7E-09 5.8E-14 86.1 5.5 38 339-376 9-46 (50)
387 1uf1_A KIAA1526 protein; PDZ d 98.9 9.7E-09 3.3E-13 100.2 12.2 88 1031-1121 19-107 (128)
388 3tsz_A Tight junction protein 98.9 3.8E-09 1.3E-13 122.6 10.7 82 436-522 10-91 (391)
389 3cyy_A Tight junction protein 98.9 1.1E-08 3.9E-13 93.4 11.5 80 1034-1120 4-85 (92)
390 3qik_A Phosphatidylinositol 3, 98.9 8.3E-09 2.8E-13 94.6 10.4 78 1034-1116 19-99 (101)
391 3qik_A Phosphatidylinositol 3, 98.9 3E-09 1E-13 97.5 7.3 80 437-521 19-99 (101)
392 2qbw_A PDZ-fibronectin fusion 98.9 7.2E-09 2.5E-13 108.8 11.2 72 1043-1116 2-80 (195)
393 2edz_A PDZ domain-containing p 98.9 1.1E-08 3.9E-13 97.5 11.4 85 918-1003 12-96 (114)
394 2eaq_A LIM domain only protein 98.9 7.7E-09 2.6E-13 94.2 9.7 70 1044-1118 18-89 (90)
395 1wr4_A Ubiquitin-protein ligas 98.8 2.3E-09 7.8E-14 79.7 4.7 34 340-373 3-36 (36)
396 1b8q_A Protein (neuronal nitri 98.8 4.9E-09 1.7E-13 102.1 8.3 89 1030-1120 6-96 (127)
397 2dmv_A Itchy homolog E3 ubiqui 98.8 3.2E-09 1.1E-13 82.0 5.1 36 339-374 5-40 (43)
398 2kpz_A E3 ubiquitin-protein li 98.8 2.5E-09 8.4E-14 85.0 4.5 36 339-374 10-45 (49)
399 2krg_A Na(+)/H(+) exchange reg 98.8 2.9E-09 9.9E-14 113.1 5.5 84 434-522 8-92 (216)
400 2rcz_A Tight junction protein 98.8 2.4E-08 8.3E-13 88.7 10.6 69 1043-1118 13-81 (81)
401 1e0m_A Wwprototype; SH3 protot 98.8 4.9E-09 1.7E-13 78.4 4.6 35 340-374 2-36 (37)
402 1wh1_A KIAA1095 protein; PDZ d 98.8 8.6E-09 2.9E-13 100.0 7.4 86 435-523 19-107 (124)
403 1wh1_A KIAA1095 protein; PDZ d 98.8 2.5E-08 8.4E-13 96.7 10.5 92 1030-1123 17-112 (124)
404 2krg_A Na(+)/H(+) exchange reg 98.7 5.7E-09 1.9E-13 110.8 5.4 87 1030-1119 7-94 (216)
405 4fln_A Protease DO-like 2, chl 98.7 1.8E-07 6.2E-12 111.8 18.6 169 460-676 276-471 (539)
406 4fln_A Protease DO-like 2, chl 98.7 1.4E-07 4.8E-12 112.7 17.6 166 944-1114 277-469 (539)
407 1ymz_A CC45; artificial protei 98.7 8E-09 2.7E-13 79.9 4.5 34 341-374 8-41 (43)
408 2jv4_A Peptidyl-prolyl CIS/tra 98.7 8.6E-09 2.9E-13 83.2 4.3 34 294-327 6-40 (54)
409 2e45_A Fe65 protein, amyloid b 98.7 9.6E-09 3.3E-13 80.8 4.1 33 293-326 17-49 (55)
410 2yub_A LIMK-2, LIM domain kina 98.7 1.1E-07 3.9E-12 91.1 12.4 64 1057-1121 43-108 (118)
411 2yub_A LIMK-2, LIM domain kina 98.7 4.5E-08 1.6E-12 93.8 8.8 73 447-522 30-104 (118)
412 2ysh_A GAS-7, growth-arrest-sp 98.7 2.4E-08 8.1E-13 75.9 5.1 35 339-373 5-39 (40)
413 2ho2_A Fe65 protein, amyloid b 98.7 2E-08 6.7E-13 74.7 4.4 33 341-374 3-35 (38)
414 1znw_A Guanylate kinase, GMP k 98.6 5E-08 1.7E-12 103.4 8.1 143 99-261 19-163 (207)
415 1jmq_A YAP65, 65 kDa YES-assoc 98.6 3E-08 1E-12 77.8 4.0 37 339-375 6-42 (46)
416 1eg3_A Dystrophin; EF-hand lik 98.6 1.9E-08 6.5E-13 108.9 3.2 36 294-329 10-45 (261)
417 2l5f_A PRE-mRNA-processing fac 98.5 2.3E-08 8E-13 90.9 2.2 69 339-412 9-78 (92)
418 2ysc_A Amyloid beta A4 precurs 98.5 1E-07 3.5E-12 71.3 4.4 33 339-372 6-38 (39)
419 3olm_A E3 ubiquitin-protein li 98.5 3.3E-08 1.1E-12 115.4 2.3 38 291-328 4-41 (429)
420 1o6w_A PRP40, PRE-mRNA process 98.5 1.5E-08 5.3E-13 88.7 -0.7 64 344-412 2-66 (75)
421 2jv4_A Peptidyl-prolyl CIS/tra 98.4 2.9E-07 9.9E-12 74.3 5.0 36 339-374 5-41 (54)
422 3tc5_A Peptidyl-prolyl CIS-tra 98.4 1.8E-07 6.1E-12 94.9 4.1 35 293-327 7-42 (166)
423 2e45_A Fe65 protein, amyloid b 98.3 4.4E-07 1.5E-11 71.5 3.8 33 340-373 18-50 (55)
424 2kjp_A Uncharacterized protein 98.3 3.4E-07 1.1E-11 83.4 3.4 58 1059-1120 2-61 (91)
425 2jx8_A Hpcif1, phosphorylated 98.3 2.1E-07 7E-12 74.5 1.6 35 294-328 9-44 (52)
426 2i6v_A General secretion pathw 98.2 1.9E-06 6.6E-11 77.7 7.8 60 1058-1120 19-80 (87)
427 2kjp_A Uncharacterized protein 98.2 6.4E-07 2.2E-11 81.6 4.2 57 462-522 2-58 (91)
428 3i18_A LMO2051 protein; alpha- 98.2 3E-06 1E-10 78.6 8.8 60 1057-1120 6-67 (100)
429 2pzd_A Serine protease HTRA2; 98.2 3.5E-06 1.2E-10 80.0 8.5 60 1057-1120 34-93 (113)
430 3id1_A Regulator of sigma E pr 98.2 3E-06 1E-10 77.8 7.8 57 1060-1119 4-62 (95)
431 2kl1_A YLBL protein; structure 98.2 1.8E-06 6.1E-11 79.1 6.2 60 1057-1120 4-65 (94)
432 3i18_A LMO2051 protein; alpha- 98.2 4.4E-06 1.5E-10 77.5 8.6 59 460-522 6-64 (100)
433 2jxw_A WW domain-binding prote 98.2 1.1E-06 3.7E-11 76.8 4.0 62 344-410 5-67 (75)
434 2l97_A HTRA, putative serine p 98.2 4.5E-06 1.5E-10 81.8 8.9 60 1057-1120 56-117 (134)
435 2kl1_A YLBL protein; structure 98.1 2.3E-06 7.8E-11 78.4 6.1 58 461-522 5-62 (94)
436 2zpm_A Regulator of sigma E pr 98.1 3.1E-06 1.1E-10 76.9 6.4 59 1059-1120 5-64 (91)
437 2i6v_A General secretion pathw 98.1 3.7E-06 1.3E-10 75.8 6.5 58 462-522 20-77 (87)
438 2p3w_A Probable serine proteas 98.1 6.1E-06 2.1E-10 78.2 7.8 60 1057-1120 34-93 (112)
439 2l97_A HTRA, putative serine p 98.1 9.1E-06 3.1E-10 79.6 8.8 58 461-522 57-114 (134)
440 2ysi_A Transcription elongatio 98.0 5E-06 1.7E-10 62.7 4.9 34 293-326 5-38 (40)
441 3id1_A Regulator of sigma E pr 98.0 7.6E-06 2.6E-10 75.1 7.2 57 463-522 4-60 (95)
442 2i4s_A General secretion pathw 98.0 9.5E-06 3.3E-10 75.9 7.5 59 1059-1120 38-98 (105)
443 1eg3_A Dystrophin; EF-hand lik 98.0 2.3E-06 7.8E-11 92.6 3.5 36 340-375 10-45 (261)
444 1fc6_A Photosystem II D1 prote 98.0 1.3E-05 4.4E-10 93.2 9.8 75 445-522 84-158 (388)
445 1ywi_A Formin-binding protein 98.0 4.4E-06 1.5E-10 63.4 3.6 34 293-326 7-40 (41)
446 2pzd_A Serine protease HTRA2; 98.0 1.2E-05 4.2E-10 76.1 7.6 57 460-522 34-90 (113)
447 2zpm_A Regulator of sigma E pr 97.9 1.2E-05 4.3E-10 72.8 5.6 57 462-522 5-61 (91)
448 2jx8_A Hpcif1, phosphorylated 97.9 3.8E-06 1.3E-10 67.2 1.7 35 340-374 9-44 (52)
449 3k50_A Putative S41 protease; 97.8 1.4E-05 4.7E-10 92.7 6.2 72 445-522 73-145 (403)
450 1fc6_A Photosystem II D1 prote 97.8 4.1E-05 1.4E-09 88.9 10.0 75 1043-1119 85-160 (388)
451 1y8t_A Hypothetical protein RV 97.8 6E-05 2.1E-09 85.4 10.8 72 1044-1120 230-304 (324)
452 2i4s_A General secretion pathw 97.8 2.7E-05 9.1E-10 72.8 6.5 58 462-522 38-95 (105)
453 2hga_A Conserved protein MTH13 97.8 5.9E-05 2E-09 72.8 9.0 57 461-522 25-81 (125)
454 1te0_A Protease DEGS; two doma 97.8 4.9E-05 1.7E-09 85.8 9.8 60 460-522 243-302 (318)
455 2p3w_A Probable serine proteas 97.8 3.8E-05 1.3E-09 72.6 7.5 57 460-522 34-90 (112)
456 3stj_A Protease DEGQ; serine p 97.8 4.4E-05 1.5E-09 87.1 9.4 60 460-522 262-321 (345)
457 2hga_A Conserved protein MTH13 97.8 4.8E-05 1.7E-09 73.4 8.1 58 1057-1119 24-83 (125)
458 3tc5_A Peptidyl-prolyl CIS-tra 97.8 1.3E-05 4.3E-10 81.3 4.2 35 340-374 8-43 (166)
459 1e0l_A Formin binding protein; 97.8 2.2E-05 7.4E-10 58.3 4.1 31 296-326 4-34 (37)
460 3stj_A Protease DEGQ; serine p 97.7 3.4E-05 1.2E-09 88.0 7.8 61 1057-1120 262-324 (345)
461 3olm_A E3 ubiquitin-protein li 97.7 1.1E-05 3.8E-10 94.1 3.3 37 339-375 6-42 (429)
462 1y8t_A Hypothetical protein RV 97.7 8.5E-05 2.9E-09 84.2 10.3 71 446-521 229-299 (324)
463 1te0_A Protease DEGS; two doma 97.7 5.3E-05 1.8E-09 85.6 8.4 61 1057-1120 243-305 (318)
464 4fgm_A Aminopeptidase N family 97.7 3.5E-05 1.2E-09 94.1 7.1 69 446-522 485-553 (597)
465 1e0n_A Hypothetical protein; Y 97.6 3.6E-05 1.2E-09 52.6 3.4 27 298-325 1-27 (27)
466 1lcy_A HTRA2 serine protease; 97.6 6.2E-05 2.1E-09 85.2 7.8 60 1057-1120 255-314 (325)
467 2ysi_A Transcription elongatio 97.6 7.3E-05 2.5E-09 56.4 5.1 34 339-372 5-38 (40)
468 3k50_A Putative S41 protease; 97.6 4.4E-05 1.5E-09 88.5 6.0 73 1043-1119 74-147 (403)
469 4fgm_A Aminopeptidase N family 97.5 9.7E-05 3.3E-09 90.1 7.7 70 1043-1120 485-556 (597)
470 3qo6_A Protease DO-like 1, chl 97.5 0.00014 4.8E-09 83.1 7.6 59 461-522 251-320 (348)
471 3qo6_A Protease DO-like 1, chl 97.4 0.00013 4.6E-09 83.3 5.8 60 1058-1120 251-323 (348)
472 1ywi_A Formin-binding protein 97.3 0.00012 4.2E-09 55.5 3.3 33 340-372 8-40 (41)
473 3a8t_A Adenylate isopentenyltr 97.3 1.3E-05 4.5E-10 90.1 -3.5 127 99-254 39-196 (339)
474 3num_A Serine protease HTRA1; 97.2 4.8E-05 1.7E-09 86.5 0.0 60 1057-1120 253-312 (332)
475 1e0l_A Formin binding protein; 97.2 0.00035 1.2E-08 51.7 4.5 31 342-372 4-34 (37)
476 1lcy_A HTRA2 serine protease; 97.2 0.00047 1.6E-08 78.0 7.8 56 461-522 256-311 (325)
477 1e0n_A Hypothetical protein; Y 97.2 0.00032 1.1E-08 47.9 3.5 27 344-371 1-27 (27)
478 1gvn_B Zeta; postsegregational 96.8 8.5E-05 2.9E-09 82.6 -2.6 137 80-250 4-160 (287)
479 3exa_A TRNA delta(2)-isopenten 96.8 2.4E-05 8.3E-10 86.8 -7.1 90 98-213 1-98 (322)
480 1k32_A Tricorn protease; prote 96.7 0.0019 6.6E-08 84.7 8.6 70 445-522 736-814 (1045)
481 3eph_A TRNA isopentenyltransfe 96.7 6.9E-05 2.3E-09 86.1 -4.8 86 101-212 3-96 (409)
482 3num_A Serine protease HTRA1; 96.6 0.00033 1.1E-08 79.6 0.0 56 461-522 254-309 (332)
483 2dk7_A Transcription elongatio 96.4 0.0021 7.1E-08 54.2 3.4 28 299-326 21-48 (73)
484 2dk1_A WW domain-binding prote 96.1 0.0023 7.9E-08 50.5 2.1 28 299-326 8-35 (50)
485 1k32_A Tricorn protease; prote 95.9 0.01 3.5E-07 77.9 8.5 70 1043-1119 737-816 (1045)
486 3foz_A TRNA delta(2)-isopenten 95.6 0.00035 1.2E-08 77.4 -6.1 88 100-213 10-105 (316)
487 1yw5_A Peptidyl prolyl CIS/tra 95.1 0.017 5.8E-07 59.0 4.9 33 294-326 6-39 (177)
488 2ze6_A Isopentenyl transferase 94.8 0.0023 7.9E-08 69.5 -2.6 125 102-254 3-140 (253)
489 2dk7_A Transcription elongatio 94.7 0.02 6.8E-07 48.3 3.4 29 345-373 21-49 (73)
490 1zak_A Adenylate kinase; ATP:A 94.5 0.0012 4.2E-08 70.0 -5.5 150 99-264 4-170 (222)
491 2dk1_A WW domain-binding prote 94.5 0.018 6.1E-07 45.4 2.4 29 345-373 8-36 (50)
492 3tlx_A Adenylate kinase 2; str 90.8 0.027 9.2E-07 60.6 -1.8 123 99-254 28-158 (243)
493 1yw5_A Peptidyl prolyl CIS/tra 90.7 0.21 7.3E-06 50.8 5.0 33 340-372 6-39 (177)
494 1a7j_A Phosphoribulokinase; tr 90.5 0.019 6.5E-07 63.6 -3.4 145 97-260 2-181 (290)
495 1qhx_A CPT, protein (chloramph 90.1 0.2 6.8E-06 50.4 4.2 125 99-254 2-135 (178)
496 3le4_A Microprocessor complex 88.4 0.55 1.9E-05 39.2 4.6 37 290-326 23-59 (79)
497 3crm_A TRNA delta(2)-isopenten 88.2 0.01 3.4E-07 66.5 -7.8 87 101-213 6-100 (323)
498 3d3q_A TRNA delta(2)-isopenten 86.8 0.036 1.2E-06 62.3 -4.3 87 101-212 8-101 (340)
499 3v9p_A DTMP kinase, thymidylat 84.6 0.14 4.8E-06 54.3 -0.9 138 88-253 14-173 (227)
500 4eaq_A DTMP kinase, thymidylat 79.3 0.45 1.5E-05 50.4 0.6 125 99-254 25-171 (229)
No 1
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=100.00 E-value=6e-33 Score=348.46 Aligned_cols=232 Identities=19% Similarity=0.275 Sum_probs=190.9
Q ss_pred ceEeEEEeCCCCCCCceeeeccccCCCceEEEEecCCccccccCCCCCCcEEEeeCCEEecCCCHHHHHHHHHhhcCCCC
Q psy6910 21 KETPVTLTVPPDGSLNFSVGGGSDSGEFAYVTNINKEKVKGAEKYLEEKAIILEIQGQKVAGYTRRDTIAWLNHCCRSGK 100 (1145)
Q Consensus 21 ~v~~~~~~~~~~g~~~~~i~gg~e~g~~~~v~~i~~~~~~~~sg~l~~GD~i~evng~~v~g~~~~~~~~~l~~~~~~~~ 100 (1145)
.++.|.|.+.. +.|||+|.|+.+ +.-++|.+|.+|+.|++.|.|++||+|++|||++|.+++.+|+.++|+++ .+
T Consensus 307 ~~~~v~l~~~~-~~lG~~i~~~~~-~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~---~~ 381 (721)
T 2xkx_A 307 EPRRIVIHRGS-TGLGFNIVGGED-GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNA---GQ 381 (721)
T ss_pred ceEEEEEEECC-CCccEEEeccCC-CCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhc---CC
Confidence 57778888764 569999998755 34578999999999999999999999999999999999999999999998 89
Q ss_pred cEEEEEecCCc----------------------------cC--------cccchh----------ccccCCCCchHHH--
Q psy6910 101 TLTLRTVSSAY----------------------------VT--------TDLRQF----------LNTRFPKGSVDHD-- 132 (1145)
Q Consensus 101 ~v~~~~~p~~~----------------------------~~--------~~~~~~----------~~l~f~k~~i~~~-- 132 (1145)
.|+|++..... .+ +-+-+| .||+|+||+|++.
T Consensus 382 ~v~L~v~r~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~~~~~~~~~~~vrAl~dy~~~~d~~~p~~~LsF~~GDil~v~~ 461 (721)
T 2xkx_A 382 TVTIIAQYKPEEYSRFEAKIHDLREQLMNSSLGSGTASLRSNPKRGFYIRALFDYDKTKDCGFLSQALSFRFGDVLHVID 461 (721)
T ss_pred eEEEEEEeCchhhhhhhhhhhhhhhhcccccccCCccccccccccceeEEEeeccCcCCCCCCccccccccCCCEEEEee
Confidence 99998863210 00 011122 3599999999641
Q ss_pred --------------------------------------------------------------------------------
Q psy6910 133 -------------------------------------------------------------------------------- 132 (1145)
Q Consensus 133 -------------------------------------------------------------------------------- 132 (1145)
T Consensus 462 ~~~~~WW~a~~~~~~~~~~~~G~iPs~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~Ye~V~~~~~~~~r~vvl~GP~K 541 (721)
T 2xkx_A 462 AGDEEWWQARRVHSDSETDDIGFIPSKRRVERREWSRLKAKDWGSSSGSQGREDSVLSYETVTQMEVHYARPIIILGPTK 541 (721)
T ss_pred cCCCCeEEEEECCCCCccCccceeecHHHHHHHHhhhcccccccCcchhhcccccCCCceeeecccCCCCCEEEEECCCH
Confidence
Q ss_pred ------HhhhhccCcceeecccccCCCCCCCcCCccEEEe-CHHHHHHHHHcCCEEEEEEeCCcccCCCccchhhhhcCC
Q psy6910 133 ------LQNIIRDNLYLRTVPVTTRTPRDGELNGVDYTFL-SIEEFKQLEKSGCLLESGLYEGNHYGTPKPVKEPYVSLP 205 (1145)
Q Consensus 133 ------l~~~~~~~~~~~~v~~TTR~~r~~E~~g~~Y~fv-s~~~f~~~~~~~~flE~~~~~g~~YGt~~~~i~~~~~~g 205 (1145)
|++. .++.|.++|+||||+||+||++|+||||| |+++|++++++|+||||++|+||||||++++|+.++++|
T Consensus 542 ~tl~~~L~~~-~~~~~~~~vs~TTR~~r~gE~~G~dY~Fv~s~~~f~~~i~~~~flE~~~~~g~~YGt~~~~v~~~~~~g 620 (721)
T 2xkx_A 542 DRANDDLLSE-FPDKFGSCVPHTTRPKREYEIDGRDYHFVSSREKMEKDIRAHKFIEAGQYNSHLYGTSVQSVREVAEQG 620 (721)
T ss_pred HHHHHHHHHh-CccceeecccccccCCCCCccCCceeEEecCHHHHHHHHhcCCceEEEEECCccceeeHHHHHHHHHCC
Confidence 1122 23458889999999999999999999999 999999999999999999999999999999999999997
Q ss_pred CCceeeecCCCChhhhhhhhcccccccceeEecCCChhhhhhhhhccCCCCcccccccCCC
Q psy6910 206 QNVNLLPGAHPSSEGKRKRNRSNVEAMASKSIEPDMKTNGFDNKTVNMGNSSDYELNDNNG 266 (1145)
Q Consensus 206 ~~~~~il~~~~~~~~~~~~~~~~~~~~~~ifi~pps~~~l~~rl~~rg~~s~~~i~~~~~~ 266 (1145)
+ +||||+++ +++++++....+++ +|||.|||+++|++ |++|+++ ++|++|+.+
T Consensus 621 ~--~~ildi~~--~~~~~l~~~~~~p~-~ifi~pps~~~L~~-l~~R~t~--~~~~~rl~~ 673 (721)
T 2xkx_A 621 K--HCILDVSA--NAVRRLQAAHLHPI-AIFIRPRSLENVLE-INKRITE--EQARKAFDR 673 (721)
T ss_pred C--cEEEeCCH--HHHHHHHhcccCCE-EEEEeCCcHHHHHH-HhccCCH--HHHHHHHHH
Confidence 7 99999877 56666654444447 89999999999999 9888854 578877754
No 2
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=99.97 E-value=5.3e-32 Score=282.02 Aligned_cols=145 Identities=21% Similarity=0.227 Sum_probs=134.2
Q ss_pred EEEEecCCccCcccchhccccCCCCchHHHHhhhhccCcceeecccccCCCCCCCcCCccEEEeCHHHHHHHHHcCCEEE
Q psy6910 103 TLRTVSSAYVTTDLRQFLNTRFPKGSVDHDLQNIIRDNLYLRTVPVTTRTPRDGELNGVDYTFLSIEEFKQLEKSGCLLE 182 (1145)
Q Consensus 103 ~~~~~p~~~~~~~~~~~~~l~f~k~~i~~~l~~~~~~~~~~~~v~~TTR~~r~~E~~g~~Y~fvs~~~f~~~~~~~~flE 182 (1145)
.+.+.|||++ |++|++.|++.+ |+.|.++|+||||+||+||++|+||||||+++|++|+++|+|||
T Consensus 4 IVi~GPSG~G-------------K~Tl~~~L~~~~-~~~~~~svs~TTR~pR~gE~~G~dY~Fvs~~eF~~~i~~g~flE 69 (186)
T 1ex7_A 4 IVISGPSGTG-------------KSTLLKKLFAEY-PDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIE 69 (186)
T ss_dssp EEEECCTTSS-------------HHHHHHHHHHHC-TTTEEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEE
T ss_pred EEEECCCCCC-------------HHHHHHHHHHhC-CCCeEEEEEEeccCCCCCCcCCceeEeecHHHHHHHHHcCCEEE
Confidence 4567899886 899999999985 67788899999999999999999999999999999999999999
Q ss_pred EEEeCCcccCCCccchhhhhcCCCCceeeecCCCChhhhhhhhcccc-cccceeEecCCChhhhhhhhhccCCCCccccc
Q psy6910 183 SGLYEGNHYGTPKPVKEPYVSLPQNVNLLPGAHPSSEGKRKRNRSNV-EAMASKSIEPDMKTNGFDNKTVNMGNSSDYEL 261 (1145)
Q Consensus 183 ~~~~~g~~YGt~~~~i~~~~~~g~~~~~il~~~~~~~~~~~~~~~~~-~~~~~ifi~pps~~~l~~rl~~rg~~s~~~i~ 261 (1145)
|++|+||+|||++++|+.++++|+ +||+|+|+ ++++++++.++ +++ +|||.|||+++|++||++||+++++.|+
T Consensus 70 ~~~~~g~~YGt~~~~v~~~l~~g~--~vil~id~--~g~~~~k~~~~~~~~-~Ifi~pps~e~L~~RL~~Rg~e~~e~i~ 144 (186)
T 1ex7_A 70 WAQFSGNYYGSTVASVKQVSKSGK--TCILDIDM--QGVKSVKAIPELNAR-FLFIAPPSVEDLKKRLEGRGTETEESIN 144 (186)
T ss_dssp EEEETTEEEEEEHHHHHHHHHHTS--EEEEECCH--HHHHHHHTCGGGCCE-EEEEECSCHHHHHHHHHHHCCSCHHHHH
T ss_pred EEEEcCceeeeecceeeehhhCCC--EEEecCCH--HHHHHHHHhcccCce-EEEEeCCCHHHHHHHHHhcCCCCHHHHH
Confidence 999999999999999999999988 99999877 78888988776 677 9999999999999999999999999999
Q ss_pred ccCCC
Q psy6910 262 NDNNG 266 (1145)
Q Consensus 262 ~~~~~ 266 (1145)
+|+.+
T Consensus 145 ~Rl~~ 149 (186)
T 1ex7_A 145 KRLSA 149 (186)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88753
No 3
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.97 E-value=1.2e-28 Score=309.33 Aligned_cols=293 Identities=31% Similarity=0.505 Sum_probs=234.2
Q ss_pred cccceEEEEEEeecCCcccEEEccCCcc-----CCceEEEEeCCCChhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHH
Q psy6910 815 VEYSDVMVITLLRQENGFGFRIVGGTEE-----GSQVSIGHIVPGGAADLDGRLCTGDEIVSVDNLSVLNSSHHHVVELM 889 (1145)
Q Consensus 815 ~~~~~~~v~~L~k~~~glGf~l~gg~~~-----~~~i~V~~V~pgs~A~~~G~L~~GD~IlsVNG~~v~~~s~~~~~~~L 889 (1145)
..+...++ .|.|+..||||+|.||.+. ..+++|..|.+++||+++|+|++||+|++|||.++.++++.+++.+|
T Consensus 56 ~~~~~~~v-~l~k~~~glGf~i~gg~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 134 (721)
T 2xkx_A 56 GEMEYEEI-TLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEAL 134 (721)
T ss_pred CCceEEEE-EEEeCCCCCCEEEeCCcCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHh
Confidence 44566677 9999988999999998764 56899999999999999999999999999999999999999999999
Q ss_pred HhccCCCeEEEEEeeccCCCCcccccCCCCCeEEEEeccCCCcccEEEeecCC------CCCceEEEeCCCCcccccCCC
Q psy6910 890 GKASVYGRVTLGIRRKVMPPAETTSMMLGYPYDVTITRRENEGFGFVIISSLN------KAGSTIGRIIEDSPADRSGEL 963 (1145)
Q Consensus 890 ~~~~~~~~v~L~v~r~~~~~~~~~~~~~~~~~~V~l~r~~~~~lG~~l~~~~~------~~g~~I~~v~~gs~A~~~G~L 963 (1145)
+.+ +..|.|+|.|..... ...+.|++.+. ..+|||++.++.. ..+++|..|.++|+|+++|+|
T Consensus 135 ~~~--g~~v~l~v~R~~~~~--------~~~~~v~l~k~-~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L 203 (721)
T 2xkx_A 135 KEA--GSIVRLYVMRRKPPA--------EKVMEIKLIKG-PKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRL 203 (721)
T ss_pred hcc--ccccceEEEeccccc--------ccceeeeeeee-cCCCceeeccCCCccccCCCCceEEEEeCCCCchhhcCCC
Confidence 876 358999998876431 12366777653 5679999876432 358999999999999999999
Q ss_pred CCCCEEEEECCeeecccCHHHHHHHHHcCCCEEEEEEeCCCCCCCCCC------Ccc--cCccC--------------C-
Q psy6910 964 HLGDHILAVNHVDIMSLHHGEIVNLIKDSGYCVTLTIGAPISGDDASS------TTS--VSAAS--------------H- 1020 (1145)
Q Consensus 964 ~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~L~v~r~~~~~~~~~------~~s--~~~~~--------------~- 1020 (1145)
++||+|++|||+++.++++.+++.+++..++.|.|+|.|......... ..+ ..... .
T Consensus 204 ~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~V~R~g~~~~~~~~~~p~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 283 (721)
T 2xkx_A 204 QIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPSNAYLSDSYAPPDITTSYSQHLDNEISHSSYLGTDYPTAM 283 (721)
T ss_pred CCCCEEEEECCeeCCCCCHHHHHHHHHcCCCeEEEEEEeCCcccccCCCCCCCcccCCCCCcccccCCcccccccccccC
Confidence 999999999999999999999999999888999999977543211000 000 00000 0
Q ss_pred CC------CC--C----CCCCCcccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECC
Q psy6910 1021 RE------YE--E----GGEHDEQYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEING 1088 (1145)
Q Consensus 1021 ~~------~p--~----~~~~~~~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING 1088 (1145)
.+ .| . ........+.|.|.+...+|||++.++.+ ..+++|..|.++|+|+++|+|++||+|++|||
T Consensus 284 ~~~~~~~~~p~~~~~~~~~~~~~~~~~v~l~~~~~~lG~~i~~~~~--~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg 361 (721)
T 2xkx_A 284 TPTSPRRYSPVAKDLLGEEDIPREPRRIVIHRGSTGLGFNIVGGED--GEGIFISFILAGGPADLSGELRKGDQILSVNG 361 (721)
T ss_pred CCCCCcccCCcccccccccccccceEEEEEEECCCCccEEEeccCC--CCCeEEEEeCCCChHHhcCCCccCCEEEEECC
Confidence 00 00 0 00112246778888887899999987654 36899999999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHHHcCCCeEEEEEEeCCCcC
Q psy6910 1089 INTKNMTHAEAIEIIRNGDSTVRLLIKRGGSVV 1121 (1145)
Q Consensus 1089 ~~v~~~s~~eav~~lk~~~~~v~L~v~R~~~~~ 1121 (1145)
.+|.++++++++++|+..++.|.|+|.|+...+
T Consensus 362 ~~v~~~~~~e~~~~l~~~~~~v~L~v~r~~~~~ 394 (721)
T 2xkx_A 362 VDLRNASHEQAAIALKNAGQTVTIIAQYKPEEY 394 (721)
T ss_pred EECCCCCHHHHHHHHHhcCCeEEEEEEeCchhh
Confidence 999999999999999998888999999887644
No 4
>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*
Probab=99.94 E-value=4.7e-28 Score=269.26 Aligned_cols=137 Identities=19% Similarity=0.274 Sum_probs=127.2
Q ss_pred ccccCCCCchHHHHhhhhccCcceeecccccCCCCCCCcCCccEEEe-CHHHHHHHHHcCCEEEEEEeCCcccCCCccch
Q psy6910 120 LNTRFPKGSVDHDLQNIIRDNLYLRTVPVTTRTPRDGELNGVDYTFL-SIEEFKQLEKSGCLLESGLYEGNHYGTPKPVK 198 (1145)
Q Consensus 120 ~~l~f~k~~i~~~l~~~~~~~~~~~~v~~TTR~~r~~E~~g~~Y~fv-s~~~f~~~~~~~~flE~~~~~g~~YGt~~~~i 198 (1145)
.|-. |++|.++|++.+ |+.|.++|+||||+||+||+||+||||| ++|+|++++++|+||||++|+||||||++++|
T Consensus 106 ~Gp~--K~tl~~~Ll~~~-p~~f~~sVs~TTR~pR~gE~dG~dY~Fv~s~e~fe~~i~~~~flE~a~~~gn~YGT~~~~V 182 (292)
T 3tvt_A 106 LGPL--KDRINDDLISEY-PDKFGSCVPHTTRPKREYEVDGRDYHFVSSREQMERDIQNHLFIEAGQYNDNLYGTSVASV 182 (292)
T ss_dssp ESTT--HHHHHHHHHHHC-TTTEECCCCEECSCCCTTCCBTTTBEECSCHHHHHHHHHTTCEEEEEEETTEEEEEEHHHH
T ss_pred eCCC--HHHHHHHHHHhC-hhhccccccCCccCCcCCccCCccccccCCHHHHHHHHhcCceEEEEEEccceeEEehHHH
Confidence 5543 999999999994 7889999999999999999999999999 99999999999999999999999999999999
Q ss_pred hhhhcCCCCceeeecCCCChhhhhhhhcccccccceeEecCCChhhhhhhhhccCCCCcccccccC
Q psy6910 199 EPYVSLPQNVNLLPGAHPSSEGKRKRNRSNVEAMASKSIEPDMKTNGFDNKTVNMGNSSDYELNDN 264 (1145)
Q Consensus 199 ~~~~~~g~~~~~il~~~~~~~~~~~~~~~~~~~~~~ifi~pps~~~l~~rl~~rg~~s~~~i~~~~ 264 (1145)
++++++|+ +||||||+ +++.+++...++++ +|||.|||+++|++|+++|++++.+.+..|+
T Consensus 183 ~~~~~~gk--~viLdid~--qg~~~lk~~~~~pi-~IFI~PpS~e~L~~r~~~r~~e~~~~~~~r~ 243 (292)
T 3tvt_A 183 REVAEKGK--HCILDVSG--NAIKRLQVAQLYPV-AVFIKPKSVDSVMEMNRRMTEEQAKKTYERA 243 (292)
T ss_dssp HHHHHHTC--EEEECCCT--HHHHHHHHTTCCCE-EEEECCSCHHHHHHTCTTSCTTHHHHHHHHH
T ss_pred HHHHHcCC--cEEEeccc--hhhhhcccccccce-EEEEECCCHHHHHHHHhCCCchhHHHHHHHH
Confidence 99999988 99999988 67888888889999 9999999999999999999988888777665
No 5
>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A
Probab=99.92 E-value=3.8e-26 Score=255.65 Aligned_cols=133 Identities=20% Similarity=0.302 Sum_probs=117.0
Q ss_pred CCCchHHHHhhhhccCcceeecccccCCCCCCCcCCccEEEe-CHHHHHHHHHcCCEEEEEEeCCcccCCCccchhhhhc
Q psy6910 125 PKGSVDHDLQNIIRDNLYLRTVPVTTRTPRDGELNGVDYTFL-SIEEFKQLEKSGCLLESGLYEGNHYGTPKPVKEPYVS 203 (1145)
Q Consensus 125 ~k~~i~~~l~~~~~~~~~~~~v~~TTR~~r~~E~~g~~Y~fv-s~~~f~~~~~~~~flE~~~~~g~~YGt~~~~i~~~~~ 203 (1145)
.|++|+++|++.+ ++.|.++|+||||+||+||+||+||||| |+++|++++++|+||||++|+||+|||++++|+.+++
T Consensus 114 gK~tl~~~L~~~~-~~~~~~~vs~TTR~~R~gE~~G~dY~Fv~s~eef~~~i~~g~flE~~~~~g~~YGt~~~~V~~~~~ 192 (295)
T 1kjw_A 114 TKDRANDDLLSEF-PDKFGSCVPHTTRPKREYEIDGRDYHFVSSREKMEKDIQAHKFIEAGQYNSHLYGTSVQSVREVAE 192 (295)
T ss_dssp THHHHHHHHHHHC-TTTEECCCCEECSCCCTTCCBTTTBEECSCHHHHHHHHHTTCEEEEEEETTEEEEEEHHHHHHHHH
T ss_pred CHHHHHHHHHhhC-ccceeeeeeecccCCCCccccCceeEecCCHHHHHHHHHCCCcEEEEEEcCcEeeeeHHHHHHHHh
Confidence 4999999999985 6678889999999999999999999999 9999999999999999999999999999999999999
Q ss_pred CCCCceeeecCCCChhhhhhhhcccccccceeEecCCChhhhhhhhhccCCCCcccccccCCC
Q psy6910 204 LPQNVNLLPGAHPSSEGKRKRNRSNVEAMASKSIEPDMKTNGFDNKTVNMGNSSDYELNDNNG 266 (1145)
Q Consensus 204 ~g~~~~~il~~~~~~~~~~~~~~~~~~~~~~ifi~pps~~~l~~rl~~rg~~s~~~i~~~~~~ 266 (1145)
+|+ +||||++++ ++++++.....++ +|||.|||+++|++ |++|+++ ++|++|+.+
T Consensus 193 ~G~--~vildid~~--g~~~l~~~~~~pi-~IfI~pps~~~L~~-L~~R~t~--~~i~~rl~~ 247 (295)
T 1kjw_A 193 QGK--HCILDVSAN--AVRRLQAAHLHPI-AIFIRPRSLENVLE-INKRITE--EQARKAFDR 247 (295)
T ss_dssp TTC--EEEECCCTT--HHHHHHHTTCCCE-EEEECCSSHHHHHH-HCTTSCH--HHHHHHHHH
T ss_pred cCC--eEEEEeCHH--HHHHHHhcccCCe-EEEEECCCHHHHHH-HHhcCCH--HHHHHHHHH
Confidence 987 999999885 5555554444457 99999999999999 9888854 668777654
No 6
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=99.91 E-value=5.1e-25 Score=258.31 Aligned_cols=198 Identities=17% Similarity=0.211 Sum_probs=149.4
Q ss_pred eEeEEEeCCCCCCCceeeeccccCCCceEEEEecCCccccccCCCCCCcEEEeeCCEEecCCCHHHHHHHHHh--hcCCC
Q psy6910 22 ETPVTLTVPPDGSLNFSVGGGSDSGEFAYVTNINKEKVKGAEKYLEEKAIILEIQGQKVAGYTRRDTIAWLNH--CCRSG 99 (1145)
Q Consensus 22 v~~~~~~~~~~g~~~~~i~gg~e~g~~~~v~~i~~~~~~~~sg~l~~GD~i~evng~~v~g~~~~~~~~~l~~--~~~~~ 99 (1145)
++.|.+.+. +.|||+|.||.+.| ++|++|++|+.|++.| |++||+|++|||++|.+++.++++.+|+. . .
T Consensus 2 ~r~V~l~k~--~~lG~~i~gg~~~G--i~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~---g 73 (468)
T 3shw_A 2 MKLVKFRKG--DSVGLRLAGGNDVG--IFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPK---G 73 (468)
T ss_dssp EEEEEEECC--SSCCEEEEEETTTE--EEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCT---T
T ss_pred ceEEEEecC--CccceEEEccCcCC--EEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCC---C
Confidence 678888885 78999999987744 8899999999999999 99999999999999999999999999998 5 7
Q ss_pred CcEEEEEecCCc------c--C------cccchh-----ccccCCCCchHH-----------------------------
Q psy6910 100 KTLTLRTVSSAY------V--T------TDLRQF-----LNTRFPKGSVDH----------------------------- 131 (1145)
Q Consensus 100 ~~v~~~~~p~~~------~--~------~~~~~~-----~~l~f~k~~i~~----------------------------- 131 (1145)
+.|+|+|.+.+. . . +.+-+| .+|+|+||+|++
T Consensus 74 ~~v~L~V~r~g~~~~~~~~~~~g~s~yVralfdy~~~~~~~LsF~~GDIL~V~d~~~~~d~~wW~A~~~~~~~~~~~~Gl 153 (468)
T 3shw_A 74 EEVTILAQKKKDVYRRIVESDVGDSFYIRTHFEYEKESPYGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGI 153 (468)
T ss_dssp SEEEEEEEECHHHHHHHHHHTCCCCEEEEECSCBCCSSTTBCCBCTTCEEEEEESSGGGCTTEEEEEEECTTSCEEEEEE
T ss_pred CEEEEEEEECCccchhhhccccccccccccccCcCCCCCCCceEccCCEEEEeecccCCCCCeEEEEEcCCCCcccccce
Confidence 899999987433 0 0 000111 455555555543
Q ss_pred --------------------------------------------------------------------------------
Q psy6910 132 -------------------------------------------------------------------------------- 131 (1145)
Q Consensus 132 -------------------------------------------------------------------------------- 131 (1145)
T Consensus 154 IPs~~~~e~~~~~~~~~~~~~~~~~~~f~~~~~~r~~kk~~~~~~~~~~~~~~~~~~~~YEeV~~~~~~~~r~iVlsGPs 233 (468)
T 3shw_A 154 IPNKNRAEQLASVQYTLPKTAGGDRADFWRFRGLRSSKRNLRKSREDLSAQPVQTKFPAYERVVLREAGFLRPVTIFGPI 233 (468)
T ss_dssp EECHHHHHHHHHHHHC-------------------------------------CCCCCSEEEEEEECCSSCCCEEEESTT
T ss_pred ecCHHHHHHHHHHhhhhhccccccccchhhhccccccccccccchhhcccccccccCCCcceeEcccCCCCCEEEEECCC
Confidence
Q ss_pred ------HHhhhhccCcceeecccccCCCCCCCcCCccEEEeCHHHHHHHHHcCCEEEEEEeCCcccCCCccchhhhhcCC
Q psy6910 132 ------DLQNIIRDNLYLRTVPVTTRTPRDGELNGVDYTFLSIEEFKQLEKSGCLLESGLYEGNHYGTPKPVKEPYVSLP 205 (1145)
Q Consensus 132 ------~l~~~~~~~~~~~~v~~TTR~~r~~E~~g~~Y~fvs~~~f~~~~~~~~flE~~~~~g~~YGt~~~~i~~~~~~g 205 (1145)
+|++. .|++|.. +||| ||+||+||++||| |++++|++++++|
T Consensus 234 G~Gl~~~Ll~~-~p~~f~s---~~TR-pR~gE~dG~~Y~F---------------------------Ts~~~V~~vl~~G 281 (468)
T 3shw_A 234 ADVAREKLARE-EPDIYQI---AKSE-PRDAGTDQRSSGI---------------------------IRLHTIKQIIDQD 281 (468)
T ss_dssp HHHHHHHHHHH-CTTTEEE---CCCB-C----------CB---------------------------CCHHHHHHHHTTT
T ss_pred HHHHHHHHHHh-CCCceee---ecCC-CCCcccccccCCc---------------------------ccHHHHHHHHHCC
Confidence 34444 3567763 4799 9999999999999 8999999999998
Q ss_pred CCceeeecCCCChhhhhhhhcccccccceeEecCCChhhhhhhhhccCCCCcccccccC
Q psy6910 206 QNVNLLPGAHPSSEGKRKRNRSNVEAMASKSIEPDMKTNGFDNKTVNMGNSSDYELNDN 264 (1145)
Q Consensus 206 ~~~~~il~~~~~~~~~~~~~~~~~~~~~~ifi~pps~~~l~~rl~~rg~~s~~~i~~~~ 264 (1145)
| +||||||+ +++++++...++++ +|||.|||+++|+++++...+++++.+++|+
T Consensus 282 k--~~iLdId~--qg~~~l~~~~~~p~-~IFI~PPS~e~L~~~~~rl~~~see~~~r~~ 335 (468)
T 3shw_A 282 K--HALLDVTP--NAVDRLNYAQWYPI-VVFLNPDSKQGVKTMRMRLCPESRKSARKLY 335 (468)
T ss_dssp C--EEEECCCH--HHHHHHHHTTCCCE-EEEEECSCHHHHHHHHHHHCTTCCCCHHHHH
T ss_pred C--eEEEEeCH--HHHHHHHhcCCCCE-EEEEeCcCHHHHHHHHhccCCCCHHHHHHHH
Confidence 8 99999988 67788887788888 9999999999999865555567777777554
No 7
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=99.90 E-value=7e-24 Score=246.29 Aligned_cols=205 Identities=16% Similarity=0.192 Sum_probs=154.8
Q ss_pred ccccceEeEEEeCCCCCCCceeeeccccCCCceEEEEecCCccccccCCCCCCcEEEeeCCEEecCCCHHHHHHHHHhhc
Q psy6910 17 HWQDKETPVTLTVPPDGSLNFSVGGGSDSGEFAYVTNINKEKVKGAEKYLEEKAIILEIQGQKVAGYTRRDTIAWLNHCC 96 (1145)
Q Consensus 17 ~~~~~v~~~~~~~~~~g~~~~~i~gg~e~g~~~~v~~i~~~~~~~~sg~l~~GD~i~evng~~v~g~~~~~~~~~l~~~~ 96 (1145)
-+...++.|.+.++. .|||+|.||.+ .-++|++|++|+.|++.| |++||+|++|||++|.+++.++++.+|+..
T Consensus 5 ~~~~~~~~v~~~k~~--~lG~~i~gg~~--~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~~- 78 (391)
T 3tsz_A 5 ILRPSMKLVKFRKGD--SVGLRLAGGND--VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDL- 78 (391)
T ss_dssp ----CEEEEEEECCS--SCCEEEEEETT--TEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHS-
T ss_pred ccCCCcEEEEeecCC--ceeEEEEecCC--CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhh-
Confidence 355678888888864 59999999876 457899999999999999 899999999999999999999999999972
Q ss_pred CCCCcEEEEEecCCc------cCc--c------cchh-----ccccCCCCchHH--------------------------
Q psy6910 97 RSGKTLTLRTVSSAY------VTT--D------LRQF-----LNTRFPKGSVDH-------------------------- 131 (1145)
Q Consensus 97 ~~~~~v~~~~~p~~~------~~~--~------~~~~-----~~l~f~k~~i~~-------------------------- 131 (1145)
.....|+|++...+. ... + +-+| .+|+|.+|+|++
T Consensus 79 ~~g~~v~l~v~r~~~~~~~~~~~~~~~~~~vral~dy~~~~~~~Lsf~~Gdil~V~~~~~~~d~~wW~a~~~~~~~~~~~ 158 (391)
T 3tsz_A 79 PKGEEVTILAQKKKDVYRRIVESDVGDSFYIRTHFEYEKESPYGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVE 158 (391)
T ss_dssp CTTSEEEEEEEECHHHHGGGTSSCCSCCEEEEECSCBCCSSTTBCCBCTTCEEEEEESSGGGSSSEEEEEEECGGGCEEE
T ss_pred cCCCeEEEEEeeCCcccccccccccccccccccccccCCCCCCcceEccCCEEEEEeccCCCCCCeEEEEEeCCCCCccc
Confidence 015589999886432 000 0 0011 344444444432
Q ss_pred --------------------------------------------------------------------------------
Q psy6910 132 -------------------------------------------------------------------------------- 131 (1145)
Q Consensus 132 -------------------------------------------------------------------------------- 131 (1145)
T Consensus 159 ~G~IPs~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~~~~~~~~~~~~~~~~YE~V~~~~~~~~r~iVls 238 (391)
T 3tsz_A 159 RGIIPNKNRAEQLASVQYTLPKTAGGDRADFWRFRGLRSSKRNLRKSREDLSAQPVQTKFPAYERVVLREAGFLRPVTIF 238 (391)
T ss_dssp EEEEECHHHHHHHHSSCCC---------------------------------------CCCSEEEEEEEECSSCCCEEEE
T ss_pred CCEecCHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCCCcceEECcCCCCCCEEEEE
Confidence
Q ss_pred ---------HHhhhhccCcceeecccccCCCCCCCcCCccEEEeCHHHHHHHHHcCCEEEEEEeCCcccCCCccchhhhh
Q psy6910 132 ---------DLQNIIRDNLYLRTVPVTTRTPRDGELNGVDYTFLSIEEFKQLEKSGCLLESGLYEGNHYGTPKPVKEPYV 202 (1145)
Q Consensus 132 ---------~l~~~~~~~~~~~~v~~TTR~~r~~E~~g~~Y~fvs~~~f~~~~~~~~flE~~~~~g~~YGt~~~~i~~~~ 202 (1145)
+|++. .|++|.. |||+||+||+||+||||| ++++|++++
T Consensus 239 GPsg~tl~~~L~~~-~p~~~~~----~tr~pR~gE~dG~~Y~Fv---------------------------~~~~V~~~~ 286 (391)
T 3tsz_A 239 GPIADVAREKLARE-EPDIYQI----AKSEPRDAGTDQRSSGII---------------------------RLHTIKQII 286 (391)
T ss_dssp STTHHHHHHHHHHH-CTTTEEE----CCCCCCCSSSCCC--CCC---------------------------CHHHHHHHH
T ss_pred CCCHHHHHHHHHhh-Ccccccc----ccCCCCCcccCCccCCcC---------------------------cHHHHHHHH
Confidence 45555 4677763 789999999999999998 799999999
Q ss_pred cCCCCceeeecCCCChhhhhhhhcccccccceeEecCCChhhhhhhhhccCCCCcccccccC
Q psy6910 203 SLPQNVNLLPGAHPSSEGKRKRNRSNVEAMASKSIEPDMKTNGFDNKTVNMGNSSDYELNDN 264 (1145)
Q Consensus 203 ~~g~~~~~il~~~~~~~~~~~~~~~~~~~~~~ifi~pps~~~l~~rl~~rg~~s~~~i~~~~ 264 (1145)
++|+ +||||||+ +++++++...++++ +|||.|||+++|++|....++++++.+++++
T Consensus 287 ~~Gk--~~iLdId~--qg~~~l~~~~~~p~-~IFI~PPS~~~L~~~~~r~~~~s~e~~~~~~ 343 (391)
T 3tsz_A 287 DQDK--HALLDVTP--NAVDRLNYAQWYPI-VVFLNPDSKQGVKTMRMRLCPESRKSARKLY 343 (391)
T ss_dssp TTTC--EEEECCCH--HHHHHHHHTTCCCE-EEEEECCCHHHHHHHHHHHCSSCCCCHHHHH
T ss_pred HcCC--EEEEEeCH--HHHHHHHhCCCCCE-EEEEeCcCHHHHHHHHhcCCCCCHHHHHHHH
Confidence 9988 99999988 67788888888888 9999999999999974433457777776444
No 8
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=99.88 E-value=2.9e-23 Score=217.52 Aligned_cols=128 Identities=22% Similarity=0.319 Sum_probs=118.4
Q ss_pred CCCcEEEEEecCCccCcccchhccccCCCCchHHHHhhhhccCcceeecccccCCCCCCCcCCccEEEeCHHHHHHHHHc
Q psy6910 98 SGKTLTLRTVSSAYVTTDLRQFLNTRFPKGSVDHDLQNIIRDNLYLRTVPVTTRTPRDGELNGVDYTFLSIEEFKQLEKS 177 (1145)
Q Consensus 98 ~~~~v~~~~~p~~~~~~~~~~~~~l~f~k~~i~~~l~~~~~~~~~~~~v~~TTR~~r~~E~~g~~Y~fvs~~~f~~~~~~ 177 (1145)
+.|.+...++|++++ |++|++.|.+.+ ++.|.+++++|||+||.||++|++|||++.++|++++.+
T Consensus 17 ~~g~~ivl~GPSGaG-------------KsTL~~~L~~~~-~~~~~~~vs~TTR~p~~gE~~G~~y~fvs~~~f~~~i~~ 82 (197)
T 3ney_A 17 QGRKTLVLIGASGVG-------------RSHIKNALLSQN-PEKFVYPVPYTTRPPRKSEEDGKEYHFISTEEMTRNISA 82 (197)
T ss_dssp CSCCEEEEECCTTSS-------------HHHHHHHHHHHC-TTTEECCCCEECSCCCTTCCTTSSCEECCHHHHHHHHHT
T ss_pred CCCCEEEEECcCCCC-------------HHHHHHHHHhhC-CccEEeeecccccCCcCCeeccccceeccHHHhhhhhhh
Confidence 488999999999996 889999999885 556778999999999999999999999999999999999
Q ss_pred CCEEEEEEeCCcccCCCccchhhhhcCCCCceeeecCCCChhhhhhhhcccccccceeEecCCChhh
Q psy6910 178 GCLLESGLYEGNHYGTPKPVKEPYVSLPQNVNLLPGAHPSSEGKRKRNRSNVEAMASKSIEPDMKTN 244 (1145)
Q Consensus 178 ~~flE~~~~~g~~YGt~~~~i~~~~~~g~~~~~il~~~~~~~~~~~~~~~~~~~~~~ifi~pps~~~ 244 (1145)
+.|+||++++||+|||++++|++++++|+ +||||+|+ ++++++++.+++++ +|||.|||++.
T Consensus 83 ~~fle~~~~~~n~YGt~~~~v~~~l~~G~--~vildid~--qg~~~~~~~~~~~~-~Ifi~Pps~~~ 144 (197)
T 3ney_A 83 NEFLEFGSYQGNMFGTKFETVHQIHKQNK--IAILDIEP--QTLKIVRTAELSPF-IVFIAPTDQGT 144 (197)
T ss_dssp TCEEEEEEETTEEEEEEHHHHHHHHHTTC--EEEEECCG--GGHHHHCSTTTCEE-EEEEEECCBSS
T ss_pred hhhhhhhhhhceecccchhhHHHHHhcCC--eEEEEECH--HHHHHHHhcCCCce-EEEEeCCCccc
Confidence 99999999999999999999999999988 99999888 67888988899998 99999999853
No 9
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.88 E-value=1.2e-21 Score=208.90 Aligned_cols=173 Identities=20% Similarity=0.309 Sum_probs=148.5
Q ss_pred ccceEEEEEEecccceeEEEecCCCCCC-ccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCC--CCHHHHHHHHhcC
Q psy6910 433 IGERIHSSLVKSLRGLGFTIVGGDDSKE-EFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLG--YTHHDMVSVFQSI 509 (1145)
Q Consensus 433 ~g~~~~v~l~k~~~glG~~i~gg~~~~~-~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~--~~~~~~~~~l~~~ 509 (1145)
.|+.+.++|.++..||||+|.+|.+... .+++|..|.++|||+++|+|++||+|++|||+++.+ ++|.+++.+++.
T Consensus 16 ~~~~~~v~~~~~~~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~- 94 (206)
T 3r0h_A 16 PNKKILIELKVEKKPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHT- 94 (206)
T ss_dssp TTSCEEEEEECTTSCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHS-
T ss_pred CCCEEEEEEEeCCCCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHh-
Confidence 5677899999999999999999987632 479999999999999999999999999999999999 999999999998
Q ss_pred CCCCe-EEEEEEeCCCCCCCCCCCCCcceecccccCCCCCCCCCccccccCCcCCCCCCCCCCCCCCcccccccCCCCCc
Q psy6910 510 SPGET-VQLEVCRGYPLPFDPNDPNTEVVTTVAVNAPDLDNGSDRHLYMSANDFTDQSVKSMPDLYTSEKMVKLERPSST 588 (1145)
Q Consensus 510 ~~g~~-v~l~v~R~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (1145)
.+.. |.|+|.|....
T Consensus 95 -~~~~~v~l~v~R~~~~--------------------------------------------------------------- 110 (206)
T 3r0h_A 95 -TYEKAVTLTVFRADPP--------------------------------------------------------------- 110 (206)
T ss_dssp -CCSSEEEEEEECCSSC---------------------------------------------------------------
T ss_pred -cCCCceEEEEEecccC---------------------------------------------------------------
Confidence 4556 99999886210
Q ss_pred cccccCCccEEEEEEecCC-CCcceEEeccCCcceEEEeec---ccccCCCCCCCEEEEECCEecCCCCHHHHHHHHhcC
Q psy6910 589 DLILESDSEYLTIPIVKGA-MGFGFTIADSSHGQKVKKILD---RQRCKNLAEGDILIEINNLNVRNMCHGEVVQVLKDC 664 (1145)
Q Consensus 589 ~~~~~~~~~~~~v~l~k~~-~glG~~i~~~~~g~~V~~i~~---a~~~g~L~~GD~Il~INg~~v~~~s~~ea~~~Lk~~ 664 (1145)
....+++.+.+.. .+|||++.....|++|..|.+ |+++|+|++||+|++|||+++.++++++++.+|+.+
T Consensus 111 ------~~~~~~v~l~~~~~~~lG~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 184 (206)
T 3r0h_A 111 ------ELEKFNVDLMKKAGKELGLSLSPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGA 184 (206)
T ss_dssp ------CEEEEEEEEECCTTCCCCEEEEECSSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred ------CCcEEEEEEecCCCCccCeEEEcCCceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 1223556776654 589999998778999999987 556667999999999999999999999999999985
Q ss_pred CCCceEEEEEEcCC
Q psy6910 665 QRNLEANIIVQRSR 678 (1145)
Q Consensus 665 ~~g~~v~L~v~R~~ 678 (1145)
+..+.|+|.|..
T Consensus 185 --~~~v~L~V~R~~ 196 (206)
T 3r0h_A 185 --NGKVSMEVTRPK 196 (206)
T ss_dssp --CSEEEEEEEEEC
T ss_pred --CCeEEEEEEeCC
Confidence 468999999964
No 10
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.88 E-value=1.7e-21 Score=205.80 Aligned_cols=172 Identities=29% Similarity=0.499 Sum_probs=148.7
Q ss_pred cceEEEEEEecccceeEEEecCCCCC----CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Q psy6910 434 GERIHSSLVKSLRGLGFTIVGGDDSK----EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSI 509 (1145)
Q Consensus 434 g~~~~v~l~k~~~glG~~i~gg~~~~----~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~ 509 (1145)
.+..+|.|.++..||||+|.+|.+.+ ..+++|..|.|+|||+++|+|++||+|++|||+++.++++.+++.+++.
T Consensus 4 ~~~~~v~l~~~~~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~- 82 (196)
T 3gsl_A 4 MEYEEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKE- 82 (196)
T ss_dssp EEEEEEEEECBTTBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT-
T ss_pred cEEEEEEEEECCCCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-
Confidence 35789999999999999999998752 4589999999999999999999999999999999999999999999998
Q ss_pred CCCCeEEEEEEeCCCCCCCCCCCCCcceecccccCCCCCCCCCccccccCCcCCCCCCCCCCCCCCcccccccCCCCCcc
Q psy6910 510 SPGETVQLEVCRGYPLPFDPNDPNTEVVTTVAVNAPDLDNGSDRHLYMSANDFTDQSVKSMPDLYTSEKMVKLERPSSTD 589 (1145)
Q Consensus 510 ~~g~~v~l~v~R~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (1145)
.|..|.|+|.|..+.
T Consensus 83 -~g~~v~l~v~r~~~~---------------------------------------------------------------- 97 (196)
T 3gsl_A 83 -AGSIVRLYVMRRKPP---------------------------------------------------------------- 97 (196)
T ss_dssp -SCSEEEEEEEEECCC----------------------------------------------------------------
T ss_pred -CCCcEEEEEEecCCC----------------------------------------------------------------
Confidence 588999999886210
Q ss_pred ccccCCccEEEEEEecCCCCcceEEeccC--------CcceEEEeec---ccccCCCCCCCEEEEECCEecCCCCHHHHH
Q psy6910 590 LILESDSEYLTIPIVKGAMGFGFTIADSS--------HGQKVKKILD---RQRCKNLAEGDILIEINNLNVRNMCHGEVV 658 (1145)
Q Consensus 590 ~~~~~~~~~~~v~l~k~~~glG~~i~~~~--------~g~~V~~i~~---a~~~g~L~~GD~Il~INg~~v~~~s~~ea~ 658 (1145)
....+++.+.+...+|||++.+.. .|++|..|.+ |+++|+|++||+|++|||+++.++++++++
T Consensus 98 -----~~~~~~v~l~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~ 172 (196)
T 3gsl_A 98 -----AEKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAV 172 (196)
T ss_dssp -----CEEEEEEEEEEBTTBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHH
T ss_pred -----ccccEEEEEecCCCCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHH
Confidence 123356788888889999997532 3688999987 666677999999999999999999999999
Q ss_pred HHHhcCCCCceEEEEEEcCC
Q psy6910 659 QVLKDCQRNLEANIIVQRSR 678 (1145)
Q Consensus 659 ~~Lk~~~~g~~v~L~v~R~~ 678 (1145)
++|+++ +..+.|+|.|++
T Consensus 173 ~~l~~~--~~~v~l~v~R~~ 190 (196)
T 3gsl_A 173 AALKNT--YDVVYLKVAKPS 190 (196)
T ss_dssp HHHHSC--CEEEEEEEEEES
T ss_pred HHHHcC--CCeEEEEEeCCC
Confidence 999985 578999999975
No 11
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.87 E-value=5.7e-21 Score=201.79 Aligned_cols=177 Identities=31% Similarity=0.532 Sum_probs=151.9
Q ss_pred CeEEEEeccCCCcccEEEeecCC------CCCceEEEeCCCCcccccCCCCCCCEEEEECCeeecccCHHHHHHHHHcCC
Q psy6910 920 PYDVTITRRENEGFGFVIISSLN------KAGSTIGRIIEDSPADRSGELHLGDHILAVNHVDIMSLHHGEIVNLIKDSG 993 (1145)
Q Consensus 920 ~~~V~l~r~~~~~lG~~l~~~~~------~~g~~I~~v~~gs~A~~~G~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~ 993 (1145)
..+|++.+. ..+|||++.++.. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++.++
T Consensus 6 ~~~v~l~~~-~~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 84 (196)
T 3gsl_A 6 YEEITLERG-NSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAG 84 (196)
T ss_dssp EEEEEEECB-TTBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSC
T ss_pred EEEEEEEEC-CCCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 356777665 6779999987654 358999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEeCCCCCCCCCCCcccCccCCCCCCCCCCCCcccEEEEeecCCcceeEEEEccCCc----ccccEEEEEEcCCC
Q psy6910 994 YCVTLTIGAPISGDDASSTTSVSAASHREYEEGGEHDEQYHAIELSRGTRGFGFSIRGGREF----QNMALFVLQIAENG 1069 (1145)
Q Consensus 994 ~~v~L~v~r~~~~~~~~~~~s~~~~~~~~~p~~~~~~~~~~~v~l~k~~~~lG~sl~gg~~~----~~~~v~V~~V~~gg 1069 (1145)
..+.|+|.|.... ....+.+.+.+...+|||++.++... ...+++|..|.++|
T Consensus 85 ~~v~l~v~r~~~~-----------------------~~~~~~v~l~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs 141 (196)
T 3gsl_A 85 SIVRLYVMRRKPP-----------------------AEKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGG 141 (196)
T ss_dssp SEEEEEEEEECCC-----------------------CEEEEEEEEEEBTTBSCEEEEESBTSCSBTTBCCEEEEEECTTS
T ss_pred CcEEEEEEecCCC-----------------------ccccEEEEEecCCCCceEEEEccCCCcCCCCCCCEEEEEECCCC
Confidence 9999999773211 12346777888778999999876543 13579999999999
Q ss_pred hhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEEEEEEeCCCc
Q psy6910 1070 PAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1070 ~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~L~v~R~~~~ 1120 (1145)
+|+++|+|++||+|++|||+++.+++|.+++++|++.++.+.|+|.|++..
T Consensus 142 ~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~~ 192 (196)
T 3gsl_A 142 AAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPSNA 192 (196)
T ss_dssp HHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSCCEEEEEEEEEESCC
T ss_pred hHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcCCCeEEEEEeCCCCc
Confidence 999999999999999999999999999999999999888899999997754
No 12
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.86 E-value=1.7e-20 Score=199.96 Aligned_cols=180 Identities=20% Similarity=0.302 Sum_probs=153.3
Q ss_pred CCcccceEEEEEEeecCCcccEEEccCCccC--CceEEEEeCCCChhhhcCCCCCCCEEEEECCEecCC--CCHHHHHHH
Q psy6910 813 KSVEYSDVMVITLLRQENGFGFRIVGGTEEG--SQVSIGHIVPGGAADLDGRLCTGDEIVSVDNLSVLN--SSHHHVVEL 888 (1145)
Q Consensus 813 ~~~~~~~~~v~~L~k~~~glGf~l~gg~~~~--~~i~V~~V~pgs~A~~~G~L~~GD~IlsVNG~~v~~--~s~~~~~~~ 888 (1145)
.....+.+.+ +|.++..||||+|.++.+.. .+++|..|.++|+|+++|+|++||+|++|||.++.+ +++.++..+
T Consensus 13 ~~~~~~~~~v-~~~~~~~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~ 91 (206)
T 3r0h_A 13 EIKPNKKILI-ELKVEKKPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQL 91 (206)
T ss_dssp CCCTTSCEEE-EEECTTSCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHH
T ss_pred CCCCCCEEEE-EEEeCCCCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHH
Confidence 3444566667 99999999999999887653 479999999999999999999999999999999999 999999999
Q ss_pred HHhccCCCe-EEEEEeeccCCCCcccccCCCCCeEEEEeccCCCcccEEEeecCCCCCceEEEeCCCCcccccCCCCCCC
Q psy6910 889 MGKASVYGR-VTLGIRRKVMPPAETTSMMLGYPYDVTITRRENEGFGFVIISSLNKAGSTIGRIIEDSPADRSGELHLGD 967 (1145)
Q Consensus 889 L~~~~~~~~-v~L~v~r~~~~~~~~~~~~~~~~~~V~l~r~~~~~lG~~l~~~~~~~g~~I~~v~~gs~A~~~G~L~~GD 967 (1145)
++... .. +.|+|.|..... ...+.+.+.+.....|||.+.... .+++|..|.++|+|+++|+|++||
T Consensus 92 ~~~~~--~~~v~l~v~R~~~~~--------~~~~~v~l~~~~~~~lG~~~~~~~--~gv~V~~V~~gs~A~~aG~L~~GD 159 (206)
T 3r0h_A 92 FHTTY--EKAVTLTVFRADPPE--------LEKFNVDLMKKAGKELGLSLSPNE--IGCTIADLIQGQYPEIDSKLQRGD 159 (206)
T ss_dssp HHSCC--SSEEEEEEECCSSCC--------EEEEEEEEECCTTCCCCEEEEECS--SCEEEEEECTTSCHHHHHHCCTTC
T ss_pred HHhcC--CCceEEEEEecccCC--------CcEEEEEEecCCCCccCeEEEcCC--ceEEEEEECCCChHHHcCCCCCCC
Confidence 88764 35 899999876542 123566666666678999987543 489999999999999999999999
Q ss_pred EEEEECCeeecccCHHHHHHHHHcCCCEEEEEEeCCCC
Q psy6910 968 HILAVNHVDIMSLHHGEIVNLIKDSGYCVTLTIGAPIS 1005 (1145)
Q Consensus 968 ~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~L~v~r~~~ 1005 (1145)
+|++|||+++.++++.+++.+++.+++.+.|+|.|+..
T Consensus 160 ~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~L~V~R~~~ 197 (206)
T 3r0h_A 160 IITKFNGDALEGLPFQVCYALFKGANGKVSMEVTRPKP 197 (206)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEECC
T ss_pred EEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 99999999999999999999999988999999988543
No 13
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.84 E-value=4.4e-20 Score=195.91 Aligned_cols=183 Identities=24% Similarity=0.390 Sum_probs=144.3
Q ss_pred CCcCccceEEEEEE-ecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy6910 429 PDELIGERIHSSLV-KSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQ 507 (1145)
Q Consensus 429 p~~~~g~~~~v~l~-k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~ 507 (1145)
|.++.|... |.|. +...||||+|.+|.+. ..+++|..|.++|||+++|.|++||+|++|||+++.+++|.+++.+|+
T Consensus 2 p~~~~~~~~-v~l~~~~~~~lG~~i~~~~~~-~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (200)
T 2qt5_A 2 PGSFKGSTV-VELMKKEGTTLGLTVSGGIDK-DGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLK 79 (200)
T ss_dssp --CCEEEEE-EEEECCTTCCCCEEEECCTTS-SSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred CcccCCCEE-EEEEeCCCCCCCEEEecccCC-CCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 345556544 5555 4678999999999776 567999999999999999559999999999999999999999999999
Q ss_pred cCCCCCeEEEEEEeCCCCCCCCCCCCCcceecccccCCCCCCCCCccccccCCcCCCCCCCCCCCCCCcccccccCCCCC
Q psy6910 508 SISPGETVQLEVCRGYPLPFDPNDPNTEVVTTVAVNAPDLDNGSDRHLYMSANDFTDQSVKSMPDLYTSEKMVKLERPSS 587 (1145)
Q Consensus 508 ~~~~g~~v~l~v~R~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (1145)
. .|..|.|+|.|..+.. ... + .
T Consensus 80 ~--~g~~v~l~v~R~~~~~-~~~-------------------g------------------------------------~ 101 (200)
T 2qt5_A 80 N--VGERVVLEVEYELPPV-SIQ-------------------G------------------------------------S 101 (200)
T ss_dssp T--CCSEEEEEEEEECCCC-CCC-------------------C------------------------------------S
T ss_pred h--CCCeEEEEEeccCCCc-ccC-------------------C------------------------------------C
Confidence 8 5889999999863210 000 0 0
Q ss_pred ccccccCCccEEEEEEecCCCCcceEEeccC-------CcceEEEeec---ccccCCCCCCCEEEEECCEecCCCCHHHH
Q psy6910 588 TDLILESDSEYLTIPIVKGAMGFGFTIADSS-------HGQKVKKILD---RQRCKNLAEGDILIEINNLNVRNMCHGEV 657 (1145)
Q Consensus 588 ~~~~~~~~~~~~~v~l~k~~~glG~~i~~~~-------~g~~V~~i~~---a~~~g~L~~GD~Il~INg~~v~~~s~~ea 657 (1145)
. .....+.|++.+...+|||.+.++. .|.+|..|.+ |+++|.|++||+|++|||+++.+++++++
T Consensus 102 ~-----~~~~~~~v~l~~~~~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~ 176 (200)
T 2qt5_A 102 S-----VMFRTVEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEA 176 (200)
T ss_dssp S-----EEEEEEEEEEECBTTBCSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHH
T ss_pred c-----cceeEEEEEEecCCCCeEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 0 0013456777777788999987542 4788999987 55566699999999999999999999999
Q ss_pred HHHHhcCCCCceEEEEEEcCC
Q psy6910 658 VQVLKDCQRNLEANIIVQRSR 678 (1145)
Q Consensus 658 ~~~Lk~~~~g~~v~L~v~R~~ 678 (1145)
.++|+. .+..+.|+|.|++
T Consensus 177 ~~~l~~--~~~~v~l~v~R~~ 195 (200)
T 2qt5_A 177 MSILKQ--CGQEATLLIEYDV 195 (200)
T ss_dssp HHHHHT--TCSEEEEEEEEEE
T ss_pred HHHHHc--CCCeEEEEEEECC
Confidence 999998 3689999999974
No 14
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.84 E-value=6.8e-20 Score=194.44 Aligned_cols=187 Identities=27% Similarity=0.447 Sum_probs=153.0
Q ss_pred CCCeEEEEeccCCCcccEEEeecCCC-CCceEEEeCCCCccccc-CCCCCCCEEEEECCeeecccCHHHHHHHHHcCCCE
Q psy6910 918 GYPYDVTITRRENEGFGFVIISSLNK-AGSTIGRIIEDSPADRS-GELHLGDHILAVNHVDIMSLHHGEIVNLIKDSGYC 995 (1145)
Q Consensus 918 ~~~~~V~l~r~~~~~lG~~l~~~~~~-~g~~I~~v~~gs~A~~~-G~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~ 995 (1145)
..++.|.+.++...+|||.+.++... .+++|..|.++|||+++ | |++||+|++|||+++.++++.++..+++..+..
T Consensus 6 ~~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~v~~~spA~~agg-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~ 84 (200)
T 2qt5_A 6 KGSTVVELMKKEGTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQ-LDVGDYIKAVNGINLAKFRHDEIISLLKNVGER 84 (200)
T ss_dssp EEEEEEEEECCTTCCCCEEEECCTTSSSCSEEEEECTTSHHHHTTS-CCTTCEEEEETTEECTTSCHHHHHHHHHTCCSE
T ss_pred CCCEEEEEEeCCCCCCCEEEecccCCCCCeEEEEECCCChHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 34577888888899999999876543 57899999999999999 6 999999999999999999999999999988999
Q ss_pred EEEEEeCCCCCCCCCCCcccCccCCCCCCCCCCCCcccEEEEeecCCcceeEEEEccCCc---ccccEEEEEEcCCChhc
Q psy6910 996 VTLTIGAPISGDDASSTTSVSAASHREYEEGGEHDEQYHAIELSRGTRGFGFSIRGGREF---QNMALFVLQIAENGPAA 1072 (1145)
Q Consensus 996 v~L~v~r~~~~~~~~~~~s~~~~~~~~~p~~~~~~~~~~~v~l~k~~~~lG~sl~gg~~~---~~~~v~V~~V~~gg~A~ 1072 (1145)
+.|.|.|........ ..........+.+.+....|||.+.++... ...+++|..|.++|+|+
T Consensus 85 v~l~v~R~~~~~~~~---------------g~~~~~~~~~v~l~~~~~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~ 149 (200)
T 2qt5_A 85 VVLEVEYELPPVSIQ---------------GSSVMFRTVEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPAD 149 (200)
T ss_dssp EEEEEEEECCCCCCC---------------CSSEEEEEEEEEEECBTTBCSEEEEEECCSSTTTCEEEEEEEECTTSHHH
T ss_pred EEEEEeccCCCcccC---------------CCccceeEEEEEEecCCCCeEEEEECCCCCCccCCCCEEEEEECCCChHH
Confidence 999997743211000 000001345666667677899999876532 13589999999999999
Q ss_pred ccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEEEEEEeCCCc
Q psy6910 1073 LDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1073 ~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~L~v~R~~~~ 1120 (1145)
++|+|++||+|++|||.++.++++++++++|+..+..+.|+|.|++..
T Consensus 150 ~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~~ 197 (200)
T 2qt5_A 150 REGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEATLLIEYDVSV 197 (200)
T ss_dssp HHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEEEEEEEEEC
T ss_pred HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCcc
Confidence 999999999999999999999999999999999778899999998754
No 15
>2kxq_A E3 ubiquitin-protein ligase smurf2; WW, smurf2, TGF-beta, modular binding, protein BIN; NMR {Homo sapiens} PDB: 2lb0_A* 2laz_A*
Probab=99.83 E-value=5.4e-21 Score=173.91 Aligned_cols=85 Identities=32% Similarity=0.590 Sum_probs=71.0
Q ss_pred cCCCCCCCCcEEEEccCCceEeeeCCCCceeccCCcchhcccccccCCCCCCCCCceeeeCCCCceEEEeCCCceeeCcC
Q psy6910 291 LDLGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRLCKFQKKLEDCSDDELPYGWERIDDPAYGTYYIDHVNKQTQYEN 370 (1145)
Q Consensus 291 ~~~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~~~~~~~~~~~~~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~ 370 (1145)
.+..+||+|||++++.+||+||+||+|++|+|++|+..............+||.|||++.+.+|++||+||.|++|+|++
T Consensus 5 ~~~~~LP~gWe~~~~~~Gr~YY~n~~t~~t~W~~P~~~~~~~~~~~~~~~~LP~gWe~~~~~~G~~Yy~n~~t~~t~w~~ 84 (90)
T 2kxq_A 5 GSPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNINCEELGPLPPGWEIRNTATGRVYFVDHNNRTTQFTD 84 (90)
T ss_dssp SSCCSCCSSCEEEEETTTEEEEEETTTTEEESSCSSSCSSSCSCCGGGTCCCCSSCCEEECTTSCEEEEETTTTEEESSC
T ss_pred CCCCCCCCCcEEEECCCCCEEEEECCCCeEeeecccccccccccCcccccccCCCceEEECCCCCEEEEECCCCcEecCC
Confidence 34467999999999999999999999999999999864321111122345899999999999999999999999999999
Q ss_pred Ccccc
Q psy6910 371 PVLQA 375 (1145)
Q Consensus 371 P~~~~ 375 (1145)
|++++
T Consensus 85 Pr~~~ 89 (90)
T 2kxq_A 85 PRLSA 89 (90)
T ss_dssp TTTSC
T ss_pred CCcCC
Confidence 99853
No 16
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=99.83 E-value=4e-21 Score=205.27 Aligned_cols=151 Identities=25% Similarity=0.269 Sum_probs=130.9
Q ss_pred cCCCCcEEEEEecCCccCcccchhccccCCCCchHHHHhhhhccCcceeecccccCCCCCCCcCCccEEEeCHHHHHHHH
Q psy6910 96 CRSGKTLTLRTVSSAYVTTDLRQFLNTRFPKGSVDHDLQNIIRDNLYLRTVPVTTRTPRDGELNGVDYTFLSIEEFKQLE 175 (1145)
Q Consensus 96 ~~~~~~v~~~~~p~~~~~~~~~~~~~l~f~k~~i~~~l~~~~~~~~~~~~v~~TTR~~r~~E~~g~~Y~fvs~~~f~~~~ 175 (1145)
|...|.+.+.++|+|++ |+|+++.|...+++. |.+.+++|||+||.+|.+|++|||++.++|.+++
T Consensus 4 m~~~g~~i~l~GpsGsG-------------KsTl~~~L~~~~~~~-~~~~~~~~tr~~~~~e~~g~~y~~~~~~~f~~~~ 69 (208)
T 3tau_A 4 MTERGLLIVLSGPSGVG-------------KGTVREAVFKDPETS-FDYSISMTTRLPREGEQDGVDYYFRSREVFEQAI 69 (208)
T ss_dssp -CCCCCEEEEECCTTSC-------------HHHHHHHHHHSTTCC-CEECCCEESSCCCTTCCBTTTBEECCHHHHHHHH
T ss_pred ccCCCcEEEEECcCCCC-------------HHHHHHHHHhhCCCc-EEEEEecccccCcCcccCCceeEEecHHHHHHHH
Confidence 45579999999999997 889999998886433 5569999999999999999999999999999999
Q ss_pred HcCCEEEEEEeCCcccCCCccchhhhhcCCCCceeeecCCCChhhhhhhhcccccccceeEecCCChhhhhhhhhccCCC
Q psy6910 176 KSGCLLESGLYEGNHYGTPKPVKEPYVSLPQNVNLLPGAHPSSEGKRKRNRSNVEAMASKSIEPDMKTNGFDNKTVNMGN 255 (1145)
Q Consensus 176 ~~~~flE~~~~~g~~YGt~~~~i~~~~~~g~~~~~il~~~~~~~~~~~~~~~~~~~~~~ifi~pps~~~l~~rl~~rg~~ 255 (1145)
.++.|+||++++|++|||+++.++.+++.|+ .||+|+++ +++..+++.++++. +||+.||+.++|++||.+|+++
T Consensus 70 ~~~~~le~~~~~~~~yg~~~~~i~~~l~~g~--~vild~~~--~g~~~~~~~~~~~~-~i~i~~ps~~~l~~Rl~~R~~~ 144 (208)
T 3tau_A 70 KDGKMLEYAEYVGNYYGTPLEYVEEKLAAGV--DIFLEIEV--QGAMQVRKAMPEGI-FIFLTPPDLSELKNRIIGRGTE 144 (208)
T ss_dssp HTTCEEEEEEETTEEEEEEHHHHHHHHHTTC--CEEEECCH--HHHHHHHHHCTTSE-EEEEECTTTTTSSCC-------
T ss_pred hcCcEEEEEEEccccCCCcHHHHHHHHHcCC--eEEEEeeH--HHHHHHHHhCCCeE-EEEEeCCCHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999987 99999776 67888889999988 9999999999999999999999
Q ss_pred CcccccccCC
Q psy6910 256 SSDYELNDNN 265 (1145)
Q Consensus 256 s~~~i~~~~~ 265 (1145)
+.++|++|+.
T Consensus 145 ~~e~i~~Rl~ 154 (208)
T 3tau_A 145 SMEVVEERME 154 (208)
T ss_dssp CCHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 9999998864
No 17
>1tk7_A CG4244-PB; WW domain, notch, signaling protein; NMR {Drosophila melanogaster} SCOP: b.72.1.1 b.72.1.1
Probab=99.83 E-value=5.3e-21 Score=173.22 Aligned_cols=82 Identities=34% Similarity=0.681 Sum_probs=71.0
Q ss_pred ccCCCCCCCCcEEEEccCCceEeeeCCCCceeccCCcchhcccccccCCCCCCCCCceeeeCCCCceEEEeCCCceeeCc
Q psy6910 290 ELDLGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRLCKFQKKLEDCSDDELPYGWERIDDPAYGTYYIDHVNKQTQYE 369 (1145)
Q Consensus 290 ~~~~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~~~~~~~~~~~~~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~ 369 (1145)
.+..++||+|||++++.+||+||+||+|++|+|++|+..... ...+...+||.||+++.+++|++||+||.|++|+|+
T Consensus 7 ~~~~~~LP~gWe~~~~~~Gr~Yy~n~~t~~t~W~~P~~~~~~--~~~~~~~~LP~gWe~~~~~~G~~Yy~nh~t~~ttw~ 84 (88)
T 1tk7_A 7 MDALGPLPDGWEKKIQSDNRVYFVNHKNRTTQWEDPRTQGQE--VSLINEGPLPPGWEIRYTAAGERFFVDHNTRRTTFE 84 (88)
T ss_dssp SSTTSSSSSSCCEEEETTTEEEEEETTTTEEEEESCCCTTTC--CHHHHSCSSCSSCEEEEETTTEEEEEETTTTEEESS
T ss_pred CCccCCCCCCcEEEECCCCCEEEEECCCCCeEeecccccccc--cccccccccCCceEEEECCCCCEEEEECCCCcEeCC
Confidence 456789999999999999999999999999999999865321 111235689999999999999999999999999999
Q ss_pred CCcc
Q psy6910 370 NPVL 373 (1145)
Q Consensus 370 ~P~~ 373 (1145)
+||+
T Consensus 85 ~Prl 88 (88)
T 1tk7_A 85 DPRP 88 (88)
T ss_dssp SSCC
T ss_pred CCCC
Confidence 9986
No 18
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.82 E-value=3.4e-19 Score=188.42 Aligned_cols=179 Identities=20% Similarity=0.282 Sum_probs=145.5
Q ss_pred ccceEEEEEEecc-cceeEEEecCCCCC---CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy6910 433 IGERIHSSLVKSL-RGLGFTIVGGDDSK---EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQS 508 (1145)
Q Consensus 433 ~g~~~~v~l~k~~-~glG~~i~gg~~~~---~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~ 508 (1145)
..+.++|.|.|+. .||||+|.+|.+.. ..+++|..|.++|||+++|+|++||+|++|||+.+.++++.++..+|+.
T Consensus 4 ~~~~~~v~l~~~~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 83 (196)
T 1p1d_A 4 HTETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRD 83 (196)
T ss_dssp CCEEEEEEEECBTTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHT
T ss_pred ccEEEEEEEEeCCCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 3467899999985 89999999986532 4579999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEEeCCCCCCCCCCCCCcceecccccCCCCCCCCCccccccCCcCCCCCCCCCCCCCCcccccccCCCCCc
Q psy6910 509 ISPGETVQLEVCRGYPLPFDPNDPNTEVVTTVAVNAPDLDNGSDRHLYMSANDFTDQSVKSMPDLYTSEKMVKLERPSST 588 (1145)
Q Consensus 509 ~~~g~~v~l~v~R~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (1145)
.+.|..|+|+|.|+..... + +
T Consensus 84 ~~~g~~v~l~v~R~~~~~~---------~-------------------------------------~------------- 104 (196)
T 1p1d_A 84 SSITSKVTLEIEFDVAESV---------I-------------------------------------P------------- 104 (196)
T ss_dssp CCSSSEEEEEEEECSCSCC---------B-------------------------------------C-------------
T ss_pred CCCCCeEEEEEEecCCCCC---------C-------------------------------------C-------------
Confidence 7668999999988631100 0 0
Q ss_pred cccccCCccEEEEEEec-CCCCcceEEecc-----CCcceEEEeec---ccccCCCCCCCEEEEECCEecCCCCHHHHHH
Q psy6910 589 DLILESDSEYLTIPIVK-GAMGFGFTIADS-----SHGQKVKKILD---RQRCKNLAEGDILIEINNLNVRNMCHGEVVQ 659 (1145)
Q Consensus 589 ~~~~~~~~~~~~v~l~k-~~~glG~~i~~~-----~~g~~V~~i~~---a~~~g~L~~GD~Il~INg~~v~~~s~~ea~~ 659 (1145)
....+.+.+.+ ...+|||++... ..|.+|..|.+ |++.|.|++||+|++|||+++.+++++++.+
T Consensus 105 ------~~~~~~v~l~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~ 178 (196)
T 1p1d_A 105 ------SSGTFHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQ 178 (196)
T ss_dssp ------CSSCEEEEECCCSSCCCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHH
T ss_pred ------CCCcEEEEecCCCCCCcCEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 00113345543 345799999764 45889999987 4555559999999999999999999999999
Q ss_pred HHhcCCCCceEEEEEEcCC
Q psy6910 660 VLKDCQRNLEANIIVQRSR 678 (1145)
Q Consensus 660 ~Lk~~~~g~~v~L~v~R~~ 678 (1145)
+|+++ +..+.|+|.|+.
T Consensus 179 ~l~~~--~~~v~l~v~R~~ 195 (196)
T 1p1d_A 179 ILQQC--EDLVKLKIRKDE 195 (196)
T ss_dssp HHHHC--TTCEEEEEECCC
T ss_pred HHHhC--CCEEEEEEEeCC
Confidence 99996 678999999974
No 19
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.81 E-value=1.1e-18 Score=184.37 Aligned_cols=181 Identities=24% Similarity=0.387 Sum_probs=148.6
Q ss_pred CCeEEEEeccCCCcccEEEeecCC-----CCCceEEEeCCCCcccccCCCCCCCEEEEECCeeecccCHHHHHHHHHcC-
Q psy6910 919 YPYDVTITRRENEGFGFVIISSLN-----KAGSTIGRIIEDSPADRSGELHLGDHILAVNHVDIMSLHHGEIVNLIKDS- 992 (1145)
Q Consensus 919 ~~~~V~l~r~~~~~lG~~l~~~~~-----~~g~~I~~v~~gs~A~~~G~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~- 992 (1145)
..++|.+.+....+|||.+.++.. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++..
T Consensus 6 ~~~~v~l~~~~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 85 (196)
T 1p1d_A 6 ETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSS 85 (196)
T ss_dssp EEEEEEEECBTTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCC
T ss_pred EEEEEEEEeCCCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 447788888888999999988632 35789999999999999999999999999999999988899999999876
Q ss_pred -CCEEEEEEeCCCCCCCCCCCcccCccCCCCCCCCCCCCcccEEEEeecC-CcceeEEEEccCCc-ccccEEEEEEcCCC
Q psy6910 993 -GYCVTLTIGAPISGDDASSTTSVSAASHREYEEGGEHDEQYHAIELSRG-TRGFGFSIRGGREF-QNMALFVLQIAENG 1069 (1145)
Q Consensus 993 -~~~v~L~v~r~~~~~~~~~~~s~~~~~~~~~p~~~~~~~~~~~v~l~k~-~~~lG~sl~gg~~~-~~~~v~V~~V~~gg 1069 (1145)
+..+.|.+.|........ ....+.+.+.+. ...|||.+...... ...+++|..|.++|
T Consensus 86 ~g~~v~l~v~R~~~~~~~~-------------------~~~~~~v~l~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~s 146 (196)
T 1p1d_A 86 ITSKVTLEIEFDVAESVIP-------------------SSGTFHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGS 146 (196)
T ss_dssp SSSEEEEEEEECSCSCCBC-------------------CSSCEEEEECCCSSCCCCCEEECSCSSSTTCCCEEEECCSSS
T ss_pred CCCeEEEEEEecCCCCCCC-------------------CCCcEEEEecCCCCCCcCEEEECCCCCCCCCCEEEEEECCCC
Confidence 788999997743221100 112355666543 35799999875322 13579999999999
Q ss_pred hhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEEEEEEeCC
Q psy6910 1070 PAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVRLLIKRGG 1118 (1145)
Q Consensus 1070 ~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~L~v~R~~ 1118 (1145)
+|+++|+|++||+|++|||.++.+++++++.++|++.+..+.|+|.|++
T Consensus 147 ~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 195 (196)
T 1p1d_A 147 VAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQCEDLVKLKIRKDE 195 (196)
T ss_dssp HHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHCTTCEEEEEECCC
T ss_pred cHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEeCC
Confidence 9999999999999999999999988899999999988888999999976
No 20
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=99.80 E-value=3.6e-20 Score=194.22 Aligned_cols=148 Identities=21% Similarity=0.234 Sum_probs=112.4
Q ss_pred CcEEEEEecCCccCcccchhccccCCCCchHHHHhhhhccCcceeecccccCCCCCCCcCCccEEEeCHHHHHHHHHcCC
Q psy6910 100 KTLTLRTVSSAYVTTDLRQFLNTRFPKGSVDHDLQNIIRDNLYLRTVPVTTRTPRDGELNGVDYTFLSIEEFKQLEKSGC 179 (1145)
Q Consensus 100 ~~v~~~~~p~~~~~~~~~~~~~l~f~k~~i~~~l~~~~~~~~~~~~v~~TTR~~r~~E~~g~~Y~fvs~~~f~~~~~~~~ 179 (1145)
+.+...++|+|++ |+|+++.|...+ +..|.+++++|||+|+.||++|.+|+|++.+.|..++..+.
T Consensus 1 ~~ii~l~GpsGaG-------------KsTl~~~L~~~~-~~~~~~~~~~~tr~~~~ge~~g~~~~~~~~~~~~~~~~~~~ 66 (186)
T 3a00_A 1 SRPIVISGPSGTG-------------KSTLLKKLFAEY-PDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNE 66 (186)
T ss_dssp CCCEEEESSSSSS-------------HHHHHHHHHHHC-GGGEECCCEEECSCCCTTCCBTTTBEECCHHHHHHHHHTTC
T ss_pred CCEEEEECCCCCC-------------HHHHHHHHHhhC-CccceEEeeccccCCCCCccCCeeeeecCHHHHHHHHhhcc
Confidence 3567778999986 889999998886 45577799999999999999999999999999999999999
Q ss_pred EEEEEEeCCcccCCCccchhhhhcCCCCceeeecCCCChhhhhhhhc-ccccccceeEecCCChhhhhhhhhccCCCCcc
Q psy6910 180 LLESGLYEGNHYGTPKPVKEPYVSLPQNVNLLPGAHPSSEGKRKRNR-SNVEAMASKSIEPDMKTNGFDNKTVNMGNSSD 258 (1145)
Q Consensus 180 flE~~~~~g~~YGt~~~~i~~~~~~g~~~~~il~~~~~~~~~~~~~~-~~~~~~~~ifi~pps~~~l~~rl~~rg~~s~~ 258 (1145)
|+||+++.+++||++++.+++++++|+ +|++|+++ ++++.+++ .+++++ +|||.||++++|++||+.||+++++
T Consensus 67 ~~e~~~~~~~~yg~~~~~i~~~l~~g~--~~il~~~~--~g~~~l~~~~~~~~~-~i~i~~p~~~~l~~Rl~~Rg~~~~~ 141 (186)
T 3a00_A 67 FIEWAQFSGNYYGSTVASVKQVSKSGK--TCILDIDM--QGVKSVKAIPELNAR-FLFIAPPSVEDLKKRLEGRGTETEE 141 (186)
T ss_dssp EEEEEEETTEEEEEEHHHHHHHHHTTC--EEEEECCH--HHHHHHHTCGGGCCE-EEEEECSCC----------------
T ss_pred eeeEEEEeceeccCcHHHHHHHHHcCC--eEEEEEcH--HHHHHHHHhcCCCeE-EEEEECcCHHHHHHHHHhcCCCCHH
Confidence 999999999999999999999999977 99999877 67788888 788888 9999999999999999999999999
Q ss_pred cccccCCC
Q psy6910 259 YELNDNNG 266 (1145)
Q Consensus 259 ~i~~~~~~ 266 (1145)
.|++|+..
T Consensus 142 ~i~~rl~~ 149 (186)
T 3a00_A 142 SINKRLSA 149 (186)
T ss_dssp --------
T ss_pred HHHHHHHH
Confidence 99988864
No 21
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=99.76 E-value=5.2e-19 Score=188.17 Aligned_cols=148 Identities=20% Similarity=0.206 Sum_probs=132.3
Q ss_pred CCcEEEEEecCCccCcccchhccccCCCCchHHHHhhhhccCcceeecccccCCCCCCCcCCccEEEeCHHHHHHHHHcC
Q psy6910 99 GKTLTLRTVSSAYVTTDLRQFLNTRFPKGSVDHDLQNIIRDNLYLRTVPVTTRTPRDGELNGVDYTFLSIEEFKQLEKSG 178 (1145)
Q Consensus 99 ~~~v~~~~~p~~~~~~~~~~~~~l~f~k~~i~~~l~~~~~~~~~~~~v~~TTR~~r~~E~~g~~Y~fvs~~~f~~~~~~~ 178 (1145)
.|.+.+.++|+|++ |+|+.+.|.+.+ +..|.++++||||+||.+|.+|++|+|++.++|.+++.+|
T Consensus 11 ~~~~i~l~G~sGsG-------------KsTl~~~L~~~~-~~~~~~~~~~ttR~~~~~e~~g~~~~~~~~~~~~~~~~~~ 76 (204)
T 2qor_A 11 RIPPLVVCGPSGVG-------------KGTLIKKVLSEF-PSRFRFSISCTTRNKREKETNGVDYYFVDKDDFERKLKEG 76 (204)
T ss_dssp CCCCEEEECCTTSC-------------HHHHHHHHHHHC-TTTEEECCEEECSCCCTTCCBTTTEEECCHHHHHHHHHTT
T ss_pred cCCEEEEECCCCCC-------------HHHHHHHHHHhC-ccceeeeeeecCCCCCCCCCCCcceeeCCHHHHHHHHHcC
Confidence 77889999999996 889999998886 3446679999999999999999999999999999999999
Q ss_pred CEEEEEEeCCcccCCCccchhhhhcCCCCceeeecCCCChhhhhhhhcccc--cccceeEecCCChhhhhhhhhccCCCC
Q psy6910 179 CLLESGLYEGNHYGTPKPVKEPYVSLPQNVNLLPGAHPSSEGKRKRNRSNV--EAMASKSIEPDMKTNGFDNKTVNMGNS 256 (1145)
Q Consensus 179 ~flE~~~~~g~~YGt~~~~i~~~~~~g~~~~~il~~~~~~~~~~~~~~~~~--~~~~~ifi~pps~~~l~~rl~~rg~~s 256 (1145)
.|+||+++.|++||++++.|+.++++|+ .||+|+++ ++.+.+++.++ +.. +|||.|++.+++.+||..|++++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~i~~~l~~g~--~vi~d~~~--~~~~~l~~~~~~~~~~-~i~l~~~s~e~l~~Rl~~R~~~~ 151 (204)
T 2qor_A 77 QFLEFDKYANNFYGTLKSEYDLAVGEGK--ICLFEMNI--NGVKQLKESKHIQDGI-YIFVKPPSIDILLGRLKNRNTEK 151 (204)
T ss_dssp CEEEEEEETTEEEEEEHHHHHHHHHTTC--EEEEECCH--HHHHHHHHCSSCSCCE-EEEEECSCHHHHHHHHHTCTTSC
T ss_pred CCEEeHHhCCCeecCCHHHHHHHHHcCC--eEEEEECH--HHHHHHHHhcCCCCeE-EEEEcCCCHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999977 99999766 56777777777 667 89999999999999999999888
Q ss_pred cccccccCC
Q psy6910 257 SDYELNDNN 265 (1145)
Q Consensus 257 ~~~i~~~~~ 265 (1145)
++.|++|+.
T Consensus 152 ~~~i~~rl~ 160 (204)
T 2qor_A 152 PEEINKRMQ 160 (204)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888887664
No 22
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=99.74 E-value=2.1e-18 Score=185.07 Aligned_cols=149 Identities=23% Similarity=0.204 Sum_probs=135.2
Q ss_pred CCcEEEEEecCCccCcccchhccccCCCCchHHHHhhhhccCcceeecccccCCCCCCCcCCccEEEeCHHHHHHHHHcC
Q psy6910 99 GKTLTLRTVSSAYVTTDLRQFLNTRFPKGSVDHDLQNIIRDNLYLRTVPVTTRTPRDGELNGVDYTFLSIEEFKQLEKSG 178 (1145)
Q Consensus 99 ~~~v~~~~~p~~~~~~~~~~~~~l~f~k~~i~~~l~~~~~~~~~~~~v~~TTR~~r~~E~~g~~Y~fvs~~~f~~~~~~~ 178 (1145)
.|.++..++|+|++ |+||++.|...++++.+...|++|||+||.+|.+|++|+|++.+.|..++.+|
T Consensus 15 ~G~ii~l~GpsGsG-------------KSTLlk~L~g~~~p~~~~g~v~~ttr~~~~~e~~gi~y~fq~~~~f~~~~~~~ 81 (219)
T 1s96_A 15 QGTLYIVSAPSGAG-------------KSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMISRD 81 (219)
T ss_dssp CCCEEEEECCTTSC-------------HHHHHHHHHHHSCTTTEEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHTT
T ss_pred CCcEEEEECCCCCC-------------HHHHHHHHhccCCCCceEEEEEecCCCCCcccccCceEEECCHHHHHHHHhcC
Confidence 78999999999997 88999999888654234459999999999999999999999999999999999
Q ss_pred CEEEEEEeCCcccCCCccchhhhhcCCCCceeeecCCCChhhhhhhhcccccccceeEecCCChhhhhhhhhccCCCCcc
Q psy6910 179 CLLESGLYEGNHYGTPKPVKEPYVSLPQNVNLLPGAHPSSEGKRKRNRSNVEAMASKSIEPDMKTNGFDNKTVNMGNSSD 258 (1145)
Q Consensus 179 ~flE~~~~~g~~YGt~~~~i~~~~~~g~~~~~il~~~~~~~~~~~~~~~~~~~~~~ifi~pps~~~l~~rl~~rg~~s~~ 258 (1145)
+|+||++|.|++|||+++.|+.+++.|+ +||||+|+ ++...+++.+++.. .|||.+++++++++||..||+++.+
T Consensus 82 ~f~E~~~~~~~~yg~~~~~v~~~l~~G~--illLDLD~--~~~~~i~~~l~~~~-tI~i~th~~~~l~~Rl~~rG~~~~e 156 (219)
T 1s96_A 82 AFLEHAEVFGNYYGTSREAIEQVLATGV--DVFLDIDW--QGAQQIRQKMPHAR-SIFILPPSKIELDRRLRGRGQDSEE 156 (219)
T ss_dssp CEEEEEEETTEEEEEEHHHHHHHHTTTC--EEEEECCH--HHHHHHHHHCTTCE-EEEEECSSHHHHHHHHHTTSCSCHH
T ss_pred HHHHHHHHHhccCCCCHHHHHHHHhcCC--eEEEEECH--HHHHHHHHHccCCE-EEEEECCCHHHHHHHHHHcCCCCHH
Confidence 9999999999999999999999999977 99999777 67788888887777 8999999999999999999999999
Q ss_pred cccccCC
Q psy6910 259 YELNDNN 265 (1145)
Q Consensus 259 ~i~~~~~ 265 (1145)
+|.+|+.
T Consensus 157 ~i~~rl~ 163 (219)
T 1s96_A 157 VIAKRMA 163 (219)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998874
No 23
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.71 E-value=9.3e-17 Score=156.28 Aligned_cols=114 Identities=54% Similarity=1.020 Sum_probs=105.7
Q ss_pred CCCcccCCCCcCccceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHH
Q psy6910 421 ENYFFTLNPDELIGERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHH 500 (1145)
Q Consensus 421 ~~~~~~~~p~~~~g~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~ 500 (1145)
..+.|+.+|.++.++.++|.|.|+..||||+|.+|.+. ..+++|.+|.++|||+++|+|++||+|++|||+++.++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~v~l~~~~~glG~~~~~g~~~-~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~ 83 (123)
T 1ueq_A 5 SSGLFTRDASQLKGTFLSTTLKKSNMGFGFTIIGGDEP-DEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHA 83 (123)
T ss_dssp CCCCCCSSSTTCCSEEEEEEEECCTTSCSEEEECCSSS-SCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHH
T ss_pred CCCccccCcccCCCcEEEEEEEeCCCceeEEEecccCC-CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH
Confidence 56789999999999999999999999999999998775 67899999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCeEEEEEEeCCCCCCCCCCCCCc
Q psy6910 501 DMVSVFQSISPGETVQLEVCRGYPLPFDPNDPNTE 535 (1145)
Q Consensus 501 ~~~~~l~~~~~g~~v~l~v~R~~~~~~~~~~~~~~ 535 (1145)
+++++|+..+.|..|.|+|.|+.++++++.+|++.
T Consensus 84 ~~~~~l~~~~~g~~v~l~v~R~~~~~~~~~~~~~~ 118 (123)
T 1ueq_A 84 DVVKLFQSVPIGQSVNLVLCRGYPLPFDPEDPANS 118 (123)
T ss_dssp HHHHHHHTSCTTCEEEEEEEESCCCCCCSSCSSCC
T ss_pred HHHHHHHhCCCCCeEEEEEEeCCCCCCCCCCCCCC
Confidence 99999999877899999999999999888777443
No 24
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.71 E-value=4.4e-17 Score=159.91 Aligned_cols=121 Identities=64% Similarity=1.084 Sum_probs=110.9
Q ss_pred CCcccCCCCcCccceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHH
Q psy6910 422 NYFFTLNPDELIGERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHD 501 (1145)
Q Consensus 422 ~~~~~~~p~~~~g~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~ 501 (1145)
.+.|++.|.++.|+.++|.|.++..||||+|.||.+. ..+++|.+|.++|||+++|+|++||+|++|||+++.+++|.+
T Consensus 5 ~~~~~~~~~~~~g~~~~v~l~~~~~g~G~~i~g~~~~-~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~ 83 (129)
T 2kpk_A 5 KPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEP-DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQ 83 (129)
T ss_dssp CCCCCSCTTTSCSEEEEEEEEECSSCCSEEEEEEEET-TEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHH
T ss_pred ccccCCCchhcCCcEEEEEEEECCCcccEEEeCccCC-CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH
Confidence 4578999999999999999999999999999998665 667999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCeEEEEEEeCCCCCCCCCCCCCcceeccccc
Q psy6910 502 MVSVFQSISPGETVQLEVCRGYPLPFDPNDPNTEVVTTVAVN 543 (1145)
Q Consensus 502 ~~~~l~~~~~g~~v~l~v~R~~~~~~~~~~~~~~~~~~~~~~ 543 (1145)
++++|+..+.|..|+|+|.|+.++|.++.++++.+++++++.
T Consensus 84 ~~~~l~~~~~g~~v~l~v~R~~~~~~~~~~~~~~~~~~~~~~ 125 (129)
T 2kpk_A 84 VVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVTSVAIL 125 (129)
T ss_dssp HHHHHHHSCTTEEEEEEEEECSCCSSCSSCCTTSSSCCTTCC
T ss_pred HHHHHHhCCCCCeEEEEEEeCCCCCCCCCCCCccEeeeeecc
Confidence 999999976689999999999999999998888777766553
No 25
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=99.70 E-value=1.5e-17 Score=173.19 Aligned_cols=131 Identities=18% Similarity=0.206 Sum_probs=115.6
Q ss_pred CCcEEEEEecCCccCcccchhccccCCCCchHHHHhhhhccCcceeecccccCCCCCCCcCCccEEEeCHHHHHHHHHcC
Q psy6910 99 GKTLTLRTVSSAYVTTDLRQFLNTRFPKGSVDHDLQNIIRDNLYLRTVPVTTRTPRDGELNGVDYTFLSIEEFKQLEKSG 178 (1145)
Q Consensus 99 ~~~v~~~~~p~~~~~~~~~~~~~l~f~k~~i~~~l~~~~~~~~~~~~v~~TTR~~r~~E~~g~~Y~fvs~~~f~~~~~~~ 178 (1145)
.|.++..++|+|++ |+|+++.|...+ +..|...++||||+||.+|.+|++|+|++.++|.+++.++
T Consensus 4 ~g~~i~i~GpsGsG-------------KSTL~~~L~~~~-~~~~~~~i~~ttr~~~~ge~~g~~~~~~~~~~~~~~~~~~ 69 (180)
T 1kgd_A 4 MRKTLVLLGAHGVG-------------RRHIKNTLITKH-PDRFAYPIPHTTRPPKKDEENGKNYYFVSHDQMMQDISNN 69 (180)
T ss_dssp CCCEEEEECCTTSS-------------HHHHHHHHHHHC-TTTEECCCCEECSCC---CCBTTTBEECCHHHHHHHHHTT
T ss_pred CCCEEEEECCCCCC-------------HHHHHHHHHhhC-CccEEEeeeccCCCCCccccCCCeeEEeCHHHHHHHHHcC
Confidence 67899999999997 889999998875 3335569999999999999999999999999999999999
Q ss_pred CEEEEEEeCCcccCCCccchhhhhcCCCCceeeecCCCChhhhhhhhcccccccceeEecCCChhhhhhh
Q psy6910 179 CLLESGLYEGNHYGTPKPVKEPYVSLPQNVNLLPGAHPSSEGKRKRNRSNVEAMASKSIEPDMKTNGFDN 248 (1145)
Q Consensus 179 ~flE~~~~~g~~YGt~~~~i~~~~~~g~~~~~il~~~~~~~~~~~~~~~~~~~~~~ifi~pps~~~l~~r 248 (1145)
.|+||+++.+|+||+++..+++++++|+ +|++|+|+ ++++.+++.++++. +|||.||++++|++|
T Consensus 70 ~~l~~~~~~~n~yg~~~~~i~~~l~~g~--~vil~id~--~g~~~~~~~~~~~~-~ifi~~p~~~~l~~R 134 (180)
T 1kgd_A 70 EYLEYGSHEDAMYGTKLETIRKIHEQGL--IAILDVEP--QALKVLRTAEFAPF-VVFIAAPTITPGLNE 134 (180)
T ss_dssp CEEEEEEETTEEEEEEHHHHHHHHHTTC--EEEEECCG--GGHHHHSSTTTCEE-EEEEECCSCCTTSCC
T ss_pred CceEEEEEcCccccccHHHHHHHHHCCC--eEEEEECH--HHHHHHHHhCCCcE-EEEEECCCHHHHHhh
Confidence 9999999999999999999999999987 99999877 57788888777777 999999999999887
No 26
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.68 E-value=1.7e-16 Score=144.03 Aligned_cols=88 Identities=19% Similarity=0.310 Sum_probs=82.0
Q ss_pred CccceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy6910 432 LIGERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISP 511 (1145)
Q Consensus 432 ~~g~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~ 511 (1145)
.+|+...|+|.|...+|||+|.++. ...+||++|.++|+|+++|+|++||+|++|||+++.|++|+|++++||++|.
T Consensus 2 ~~g~~k~V~l~K~~~~LG~tI~~~g---~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~ 78 (95)
T 3gge_A 2 MKGIEKEVNVYKSEDSLGLTITDNG---VGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKK 78 (95)
T ss_dssp CCEEEEEEEEECCSSCCCEEEECSS---SSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCT
T ss_pred CCCeEEEEEEEECCCCceEEEEcCC---CCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCC
Confidence 5799999999999999999999752 2358999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEEeC
Q psy6910 512 GETVQLEVCRG 522 (1145)
Q Consensus 512 g~~v~l~v~R~ 522 (1145)
|..++|++.+.
T Consensus 79 g~~~~L~lv~p 89 (95)
T 3gge_A 79 EELFTMKLIEP 89 (95)
T ss_dssp TCEEEEEEEEE
T ss_pred CCEEEEEEECc
Confidence 99999999874
No 27
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.67 E-value=2.6e-15 Score=154.14 Aligned_cols=159 Identities=23% Similarity=0.372 Sum_probs=131.7
Q ss_pred CCeEEEEeccCCCcccEEEeecCCCCCceEEEeCCCCcccccCCCCCCCEEEEECCeeecccCHHHHHHHHHc-CCCEEE
Q psy6910 919 YPYDVTITRRENEGFGFVIISSLNKAGSTIGRIIEDSPADRSGELHLGDHILAVNHVDIMSLHHGEIVNLIKD-SGYCVT 997 (1145)
Q Consensus 919 ~~~~V~l~r~~~~~lG~~l~~~~~~~g~~I~~v~~gs~A~~~G~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~-~~~~v~ 997 (1145)
.++.|.+.+.....|||.+.... .+++|..|.++|||+++| |+.||+|++|||+++.++++.....+++. .+..+.
T Consensus 4 ~~r~v~l~k~~~~~lG~~~~~~~--~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~v~ 80 (166)
T 1w9e_A 4 DPREVILCKDQDGKIGLRLKSID--NGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKIT 80 (166)
T ss_dssp CCEEEEEECCTTSCCSEEEEEET--TEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEE
T ss_pred CCEEEEEEeCCCCcEeEEEEeCC--CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEE
Confidence 45788888877889999987643 489999999999999999 99999999999999999988666667765 456899
Q ss_pred EEEeCCCCCCCCCCCcccCccCCCCCCCCCCCCcccEEEEeecC-CcceeEEEEccCCcccccEEEEEEcCCChhcccCC
Q psy6910 998 LTIGAPISGDDASSTTSVSAASHREYEEGGEHDEQYHAIELSRG-TRGFGFSIRGGREFQNMALFVLQIAENGPAALDGH 1076 (1145)
Q Consensus 998 L~v~r~~~~~~~~~~~s~~~~~~~~~p~~~~~~~~~~~v~l~k~-~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~ 1076 (1145)
|+|++. .+.+++.+.+. ...|||.+.. + +|..|.++++|+++|
T Consensus 81 l~vr~~---------------------------~~~~~v~l~~~~~~~lG~~~~~-------g-~v~~v~~~s~a~~aG- 124 (166)
T 1w9e_A 81 MTIRDR---------------------------PFERTITMHKDSTGHVGFIFKN-------G-KITSIVKDSSAARNG- 124 (166)
T ss_dssp EEEECC---------------------------TTCEEEEEECCTTSCCSEEEET-------T-EEEEECTTSHHHHTT-
T ss_pred EEEEcC---------------------------CCcEEEEEecCCCCcEeEEEeC-------C-EEEEEccCCHHHHcC-
Confidence 999542 12345566532 3568998862 3 799999999999999
Q ss_pred CCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEEEEEEe
Q psy6910 1077 LKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVRLLIKR 1116 (1145)
Q Consensus 1077 L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~L~v~R 1116 (1145)
|++||+|++|||.++.++.+.++.-.+++.+..+.|.+..
T Consensus 125 l~~GD~I~~ing~~v~~~~~~~v~~~v~r~g~~~~l~v~~ 164 (166)
T 1w9e_A 125 LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP 164 (166)
T ss_dssp CCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEE
T ss_pred CCCCCEEEEECCEECCCCChHHHHHHHhhCCCEEEEEEEE
Confidence 9999999999999999999999998899888888887753
No 28
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.65 E-value=4.5e-17 Score=189.61 Aligned_cols=165 Identities=22% Similarity=0.369 Sum_probs=72.1
Q ss_pred CCeEEEEeccCCCcccEEEeecCCC---CCceEEEeCCCCcccccCCCCCCCEEEEECCeeecccCHHHHHHHHHcC--C
Q psy6910 919 YPYDVTITRRENEGFGFVIISSLNK---AGSTIGRIIEDSPADRSGELHLGDHILAVNHVDIMSLHHGEIVNLIKDS--G 993 (1145)
Q Consensus 919 ~~~~V~l~r~~~~~lG~~l~~~~~~---~g~~I~~v~~gs~A~~~G~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~--~ 993 (1145)
....|.+.+..+++|||.+.+.... .+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++.. +
T Consensus 204 ~~~~V~i~k~~ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~ 283 (388)
T 3suz_A 204 NCKELQLEKHKGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQ 283 (388)
T ss_dssp CCEEEEECCCSSCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTTC
T ss_pred cceEEEEECCCCCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccCC
Confidence 4467888887789999998763321 3589999999999999999999999999999999999999999999874 4
Q ss_pred CEEEEEEeCCCCCCCCCCCcccCccCCCCCCCCCCCCcccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcc
Q psy6910 994 YCVTLTIGAPISGDDASSTTSVSAASHREYEEGGEHDEQYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAAL 1073 (1145)
Q Consensus 994 ~~v~L~v~r~~~~~~~~~~~s~~~~~~~~~p~~~~~~~~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~ 1073 (1145)
..+.|+|.|...... ..+........|||++.++ +|..|.++|+|++
T Consensus 284 ~~v~l~v~r~~~~~~-------------------------v~l~~~~~~~~lG~~i~~g--------~I~~V~~gs~A~~ 330 (388)
T 3suz_A 284 TQVKLNIVSCPPVTT-------------------------VLIKRPDLKYQLGFSVQNG--------IICSLMRGGIAER 330 (388)
T ss_dssp SCEEEEEEECCSCC------------------------------------------------------------------
T ss_pred Cccccccccccccce-------------------------eeEeecCCCCccceEEecC--------EEEEeecCCHHHH
Confidence 569999977422110 1111112234688887542 7999999999999
Q ss_pred cCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEEEEEEeC
Q psy6910 1074 DGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVRLLIKRG 1117 (1145)
Q Consensus 1074 ~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~L~v~R~ 1117 (1145)
+| |++||+|++|||+++.+++|++++++|++.++.+.|+|.+.
T Consensus 331 aG-L~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~~~v~L~V~p~ 373 (388)
T 3suz_A 331 GG-VRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMKTMPA 373 (388)
T ss_dssp --------------------------------------------
T ss_pred cC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEec
Confidence 99 99999999999999999999999999999988899988654
No 29
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=99.65 E-value=1.4e-16 Score=168.68 Aligned_cols=148 Identities=19% Similarity=0.229 Sum_probs=130.6
Q ss_pred CCcEEEEEecCCccCcccchhccccCCCCchHHHHhhhhccCcceeecccccCCCCCCCcCCccEEEeCHHHHHHHHHcC
Q psy6910 99 GKTLTLRTVSSAYVTTDLRQFLNTRFPKGSVDHDLQNIIRDNLYLRTVPVTTRTPRDGELNGVDYTFLSIEEFKQLEKSG 178 (1145)
Q Consensus 99 ~~~v~~~~~p~~~~~~~~~~~~~l~f~k~~i~~~l~~~~~~~~~~~~v~~TTR~~r~~E~~g~~Y~fvs~~~f~~~~~~~ 178 (1145)
.|.++..++|+|++ |+|+++.|...+ +..|.+.++||||+|+.||++|++|+|++.++|.+++.++
T Consensus 3 ~g~~i~lvGpsGaG-------------KSTLl~~L~~~~-~~~~~~~v~~ttr~~~~g~~~g~~~~~~~~~~~~~~i~~~ 68 (198)
T 1lvg_A 3 GPRPVVLSGPSGAG-------------KSTLLKKLFQEH-SSIFGFSVSHTTRNPRPGEEDGKDYYFVTREMMQRDIAAG 68 (198)
T ss_dssp --CCEEEECCTTSS-------------HHHHHHHHHHHH-TTTEEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCC-------------HHHHHHHHHhhC-chhceeeeeeeccCCCCcccCCceEEEccHHHHHHHHHcC
Confidence 57888999999997 889999888775 5678889999999999999999999999999999999999
Q ss_pred CEEEEEEeCCcccCCCccchhhhhcCCCCceeeecCCCChhhhhhhhcccccccceeEecCCChhhhhhhhhccCCCCcc
Q psy6910 179 CLLESGLYEGNHYGTPKPVKEPYVSLPQNVNLLPGAHPSSEGKRKRNRSNVEAMASKSIEPDMKTNGFDNKTVNMGNSSD 258 (1145)
Q Consensus 179 ~flE~~~~~g~~YGt~~~~i~~~~~~g~~~~~il~~~~~~~~~~~~~~~~~~~~~~ifi~pps~~~l~~rl~~rg~~s~~ 258 (1145)
.|+||++|.+|+||++.++++++++.++ .+++++++ +++...+.....+. .+|+.+|++++|.+|+..|+.++++
T Consensus 69 ~~l~~~~~~~n~~g~~~~~i~~~~~~~~--~~~~~~~~--~g~~~~~~~~~~~~-~~~l~~p~~~ilde~~~~~d~~~e~ 143 (198)
T 1lvg_A 69 DFIEHAEFSGNLYGTSKEAVRAVQAMNR--ICVLDVDL--QGVRSIKKTDLCPI-YIFVQPPSLDVLEQRLRLRNTETEE 143 (198)
T ss_dssp CEEEEEEETTEEEEEEHHHHHHHHHTTC--EEEEECCH--HHHHHHTTSSCCCE-EEEEECSCHHHHHHHHHHHTCSCHH
T ss_pred CCEeeeeecCccCCCCHHHHHHHHHcCC--cEEEECCH--HHHHHHHhcCCCcE-EEEEeCCCHHHHHHHHHhcCCCCHH
Confidence 9999999999999999999999999976 88888765 56666666555666 7999999999999999999999999
Q ss_pred cccccCC
Q psy6910 259 YELNDNN 265 (1145)
Q Consensus 259 ~i~~~~~ 265 (1145)
.|++|+.
T Consensus 144 ~i~~~l~ 150 (198)
T 1lvg_A 144 SLAKRLA 150 (198)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9997763
No 30
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.64 E-value=9.1e-15 Score=150.08 Aligned_cols=155 Identities=23% Similarity=0.416 Sum_probs=128.9
Q ss_pred EEEeec-CCcccEEEccCCccCCceEEEEeCCCChhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhccCCCeEEEE
Q psy6910 823 ITLLRQ-ENGFGFRIVGGTEEGSQVSIGHIVPGGAADLDGRLCTGDEIVSVDNLSVLNSSHHHVVELMGKASVYGRVTLG 901 (1145)
Q Consensus 823 ~~L~k~-~~glGf~l~gg~~~~~~i~V~~V~pgs~A~~~G~L~~GD~IlsVNG~~v~~~s~~~~~~~L~~~~~~~~v~L~ 901 (1145)
|.|.|. ..+|||.+... ..+++|..|.++|||+++| |++||+|++|||.++.++++..+..+++... +..+.|+
T Consensus 8 v~l~k~~~~~lG~~~~~~---~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~~-~~~v~l~ 82 (166)
T 1w9e_A 8 VILCKDQDGKIGLRLKSI---DNGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQAF-GEKITMT 82 (166)
T ss_dssp EEEECCTTSCCSEEEEEE---TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHCC-SSEEEEE
T ss_pred EEEEeCCCCcEeEEEEeC---CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCC-CCEEEEE
Confidence 378886 67899999763 4689999999999999999 9999999999999999988766667776553 4588999
Q ss_pred EeeccCCCCcccccCCCCCeEEEEeccCCCcccEEEeecCCCCCceEEEeCCCCcccccCCCCCCCEEEEECCeeecccC
Q psy6910 902 IRRKVMPPAETTSMMLGYPYDVTITRRENEGFGFVIISSLNKAGSTIGRIIEDSPADRSGELHLGDHILAVNHVDIMSLH 981 (1145)
Q Consensus 902 v~r~~~~~~~~~~~~~~~~~~V~l~r~~~~~lG~~l~~~~~~~g~~I~~v~~gs~A~~~G~L~~GD~Il~VNG~~v~~~~ 981 (1145)
+++... .+.+.+.+.....|||.+.. + +|..+.++|+|+++| |+.||+|++|||.++.++.
T Consensus 83 vr~~~~------------~~~v~l~~~~~~~lG~~~~~-----g-~v~~v~~~s~a~~aG-l~~GD~I~~ing~~v~~~~ 143 (166)
T 1w9e_A 83 IRDRPF------------ERTITMHKDSTGHVGFIFKN-----G-KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLK 143 (166)
T ss_dssp EECCTT------------CEEEEEECCTTSCCSEEEET-----T-EEEEECTTSHHHHTT-CCSSEEEEEETTEECTTCC
T ss_pred EEcCCC------------cEEEEEecCCCCcEeEEEeC-----C-EEEEEccCCHHHHcC-CCCCCEEEEECCEECCCCC
Confidence 944322 25667765556789998861 4 899999999999999 9999999999999999999
Q ss_pred HHHHHHHHHcCCCEEEEEEe
Q psy6910 982 HGEIVNLIKDSGYCVTLTIG 1001 (1145)
Q Consensus 982 ~~~~~~~l~~~~~~v~L~v~ 1001 (1145)
+..+...++..+..+.+.+.
T Consensus 144 ~~~v~~~v~r~g~~~~l~v~ 163 (166)
T 1w9e_A 144 DSQIADILSTSGTVVTITIM 163 (166)
T ss_dssp HHHHHHHHHHSCSEEEEEEE
T ss_pred hHHHHHHHhhCCCEEEEEEE
Confidence 99988888888888887763
No 31
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.63 E-value=1.4e-16 Score=185.45 Aligned_cols=160 Identities=20% Similarity=0.286 Sum_probs=72.2
Q ss_pred EEeec-CCcccEEEccCCc--cCCceEEEEeCCCChhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhccCCCeEEE
Q psy6910 824 TLLRQ-ENGFGFRIVGGTE--EGSQVSIGHIVPGGAADLDGRLCTGDEIVSVDNLSVLNSSHHHVVELMGKASVYGRVTL 900 (1145)
Q Consensus 824 ~L~k~-~~glGf~l~gg~~--~~~~i~V~~V~pgs~A~~~G~L~~GD~IlsVNG~~v~~~s~~~~~~~L~~~~~~~~v~L 900 (1145)
.+.|. +++|||.|.+... ...+++|..|.++|||+++|+|++||+|++|||.++.++++.++..+++....+..+.|
T Consensus 209 ~i~k~~ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~~~v~l 288 (388)
T 3suz_A 209 QLEKHKGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKL 288 (388)
T ss_dssp EECCCSSCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTTCSCEEE
T ss_pred EEECCCCCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccCCCcccc
Confidence 77787 7899999987432 12358999999999999999999999999999999999999999999988755567999
Q ss_pred EEeeccCCCCcccccCCCCCeEEEEe-ccCCCcccEEEeecCCCCCceEEEeCCCCcccccCCCCCCCEEEEECCeeecc
Q psy6910 901 GIRRKVMPPAETTSMMLGYPYDVTIT-RRENEGFGFVIISSLNKAGSTIGRIIEDSPADRSGELHLGDHILAVNHVDIMS 979 (1145)
Q Consensus 901 ~v~r~~~~~~~~~~~~~~~~~~V~l~-r~~~~~lG~~l~~~~~~~g~~I~~v~~gs~A~~~G~L~~GD~Il~VNG~~v~~ 979 (1145)
+|.|.... ..+.+. ......|||.+.+ .+|..|.++|+|+++| |++||+|++|||+++.+
T Consensus 289 ~v~r~~~~------------~~v~l~~~~~~~~lG~~i~~------g~I~~V~~gs~A~~aG-L~~GD~Il~VNg~~v~~ 349 (388)
T 3suz_A 289 NIVSCPPV------------TTVLIKRPDLKYQLGFSVQN------GIICSLMRGGIAERGG-VRVGHRIIEINGQSVVA 349 (388)
T ss_dssp EEEECCSC------------C-----------------------------------------------------------
T ss_pred cccccccc------------ceeeEeecCCCCccceEEec------CEEEEeecCCHHHHcC-CCCCCEEEEECCEECCC
Confidence 99986543 233332 2234578887653 3899999999999999 99999999999999999
Q ss_pred cCHHHHHHHHHcCCCEEEEEEeC
Q psy6910 980 LHHGEIVNLIKDSGYCVTLTIGA 1002 (1145)
Q Consensus 980 ~~~~~~~~~l~~~~~~v~L~v~r 1002 (1145)
+++.+++.+++.+++.+.|+|..
T Consensus 350 ~s~~~~~~~l~~~~~~v~L~V~p 372 (388)
T 3suz_A 350 TAHEKIVQALSNSVGEIHMKTMP 372 (388)
T ss_dssp -----------------------
T ss_pred CCHHHHHHHHHhCCCeEEEEEEe
Confidence 99999999999998888888843
No 32
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.62 E-value=1.5e-15 Score=143.42 Aligned_cols=90 Identities=43% Similarity=0.685 Sum_probs=81.9
Q ss_pred CccEEEEEEecCCCCcceEEeccCCcceEEEeecccccCCCCCCCEEEEECCEecCCCCHHHHHHHHhcCCCCceEEEEE
Q psy6910 595 DSEYLTIPIVKGAMGFGFTIADSSHGQKVKKILDRQRCKNLAEGDILIEINNLNVRNMCHGEVVQVLKDCQRNLEANIIV 674 (1145)
Q Consensus 595 ~~~~~~v~l~k~~~glG~~i~~~~~g~~V~~i~~a~~~g~L~~GD~Il~INg~~v~~~s~~ea~~~Lk~~~~g~~v~L~v 674 (1145)
.++.++|+|.|+..||||+|.++..|++|++|.+++++++|++||+|++|||+++.+++|+||+++|++++.|..|+|+|
T Consensus 10 ~~~~~~V~L~Kg~~G~GFsI~~~~~g~~V~~I~~~~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~L~V 89 (113)
T 3soe_A 10 AGLLVTIPLIKGPKGFGFAIADSPTGQKVKMILDSQWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPLLI 89 (113)
T ss_dssp HCEEEEEEEECBTTBSSEEEEEETTEEEEEEESCGGGSTTCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCEEEEEEEECCCcccEEEeCCCCCcEEEEecChHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEE
Confidence 57889999999999999999998889999999999999999999999999999999999999999999998889999999
Q ss_pred EcCCCCCCCC
Q psy6910 675 QRSRLQHKKT 684 (1145)
Q Consensus 675 ~R~~~~~p~~ 684 (1145)
.|.+...|+.
T Consensus 90 ~R~g~~~p~~ 99 (113)
T 3soe_A 90 LRGGPPSPTK 99 (113)
T ss_dssp EESSCC----
T ss_pred EECCccCccc
Confidence 9998765554
No 33
>1o6w_A PRP40, PRE-mRNA processing protein PRP40; WW domain PAIR, nuclear protein, mRNA splicing, ribonucleoprotein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1 b.72.1.1
Probab=99.57 E-value=8.1e-16 Score=135.32 Aligned_cols=72 Identities=19% Similarity=0.445 Sum_probs=62.4
Q ss_pred CCcEEEEccCCceEeeeCCCCceeccCCcchhcccccccCCCCCCCCCceeeeCCCCceEEEeCCCceeeCcCCccc
Q psy6910 298 PRWEKAYTEKGEVYFIDHNSSTSSWLDPRLCKFQKKLEDCSDDELPYGWERIDDPAYGTYYIDHVNKQTQYENPVLQ 374 (1145)
Q Consensus 298 ~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~~~~~~~~~~~~~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~ 374 (1145)
++|+++.+++|++||+||+|++|+|++|+...... ....||.||++..+++|++||+||.|++|+|++|++.
T Consensus 2 ~~W~~~~~~~Gr~YY~n~~T~~s~W~~P~~~~~~~-----~~~~lp~gW~~~~~~~Gr~Yy~n~~t~~t~W~~P~~~ 73 (75)
T 1o6w_A 2 SIWKEAKDASGRIYYYNTLTKKSTWEKPKELISQE-----ELLLRENGWKAAKTADGKVYYYNPTTRETSWTIPAFE 73 (75)
T ss_dssp CCEEEEECTTCCEEEEETTTTEEESSCCHHHHHHH-----HHHHHHHTCEEEECTTCCEEEEETTTTEEESSCCCCC
T ss_pred CCCeEEECCCCCeEEEECCCCCEEeecchhhcccc-----cccCCCCeEEEEECCCCCEEEEECCCCCEECCCCCCC
Confidence 47999999999999999999999999997543211 1135899999999999999999999999999999875
No 34
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.57 E-value=7.9e-15 Score=133.17 Aligned_cols=85 Identities=19% Similarity=0.327 Sum_probs=73.5
Q ss_pred ceEeEEEeCCCCCCCceeeeccccCCCceEEEEecCCccccccCCCCCCcEEEeeCCEEecCCCHHHHHHHHHhhcCCCC
Q psy6910 21 KETPVTLTVPPDGSLNFSVGGGSDSGEFAYVTNINKEKVKGAEKYLEEKAIILEIQGQKVAGYTRRDTIAWLNHCCRSGK 100 (1145)
Q Consensus 21 ~v~~~~~~~~~~g~~~~~i~gg~e~g~~~~v~~i~~~~~~~~sg~l~~GD~i~evng~~v~g~~~~~~~~~l~~~~~~~~ 100 (1145)
..++|.|.|++ ++|||||.++ ..| .+||+||++||+|+++|.||+||+|+||||++|.|++++|++++|+++ ....
T Consensus 5 ~~k~V~l~K~~-~~LG~tI~~~-g~g-~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~-~~g~ 80 (95)
T 3gge_A 5 IEKEVNVYKSE-DSLGLTITDN-GVG-YAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKEL-KKEE 80 (95)
T ss_dssp EEEEEEEECCS-SCCCEEEECS-SSS-CCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHS-CTTC
T ss_pred eEEEEEEEECC-CCceEEEEcC-CCC-cEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhC-CCCC
Confidence 46789999975 7899999975 334 378999999999999999999999999999999999999999999998 2233
Q ss_pred cEEEEEecC
Q psy6910 101 TLTLRTVSS 109 (1145)
Q Consensus 101 ~v~~~~~p~ 109 (1145)
+++|+++..
T Consensus 81 ~~~L~lv~p 89 (95)
T 3gge_A 81 LFTMKLIEP 89 (95)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEECc
Confidence 888888763
No 35
>2l5f_A PRE-mRNA-processing factor 40 homolog A; 2WW, HYPA, FBP11, protein binding; NMR {Homo sapiens}
Probab=99.53 E-value=6.6e-15 Score=134.27 Aligned_cols=78 Identities=17% Similarity=0.362 Sum_probs=66.0
Q ss_pred CCCCCCCCcEEEEccCCceEeeeCCCCceeccCCcchhcccccccCCCCCCCCCceeeeCCCCceEEEeCCCceeeCcCC
Q psy6910 292 DLGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRLCKFQKKLEDCSDDELPYGWERIDDPAYGTYYIDHVNKQTQYENP 371 (1145)
Q Consensus 292 ~~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~~~~~~~~~~~~~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P 371 (1145)
...+||++|+++.+++||+||+||.|++|+|++|........ ...||.+|++..+++|++||+||.|++++|++|
T Consensus 8 ~~~~lp~~W~e~~~~~Gr~YYyN~~T~~s~We~P~~~~~~~e-----~~~~~~~W~~~~~~~Gr~Yy~N~~T~~s~We~P 82 (92)
T 2l5f_A 8 TASGAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAE-----QLLSKCPWKEYKSDSGKTYYYNSQTKESRWAKP 82 (92)
T ss_dssp STTBTTTTEEEEECTTSCEEEEETTTTEEESSCSGGGTCHHH-----HHHHSCSEEEEECTTCCEEEEETTTTEEESCCC
T ss_pred cCCCCCCCcEEEEcCCCCEEEEECCCCceecccCcccccccc-----ccccccceEEEECCCCCEEEEECCCCCeeccCc
Confidence 345699999999999999999999999999999975331110 114789999999999999999999999999999
Q ss_pred ccc
Q psy6910 372 VLQ 374 (1145)
Q Consensus 372 ~~~ 374 (1145)
+.-
T Consensus 83 ~~~ 85 (92)
T 2l5f_A 83 KEL 85 (92)
T ss_dssp HHH
T ss_pred hhH
Confidence 753
No 36
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.51 E-value=6.7e-14 Score=149.05 Aligned_cols=146 Identities=22% Similarity=0.272 Sum_probs=111.2
Q ss_pred CCceEEEeCCCCcccccCCCCCC-CEEEEECCeeecccCHHHHHHHHHcCCCEEEEEEeCCCCCCCCCCCcccCccCCCC
Q psy6910 944 AGSTIGRIIEDSPADRSGELHLG-DHILAVNHVDIMSLHHGEIVNLIKDSGYCVTLTIGAPISGDDASSTTSVSAASHRE 1022 (1145)
Q Consensus 944 ~g~~I~~v~~gs~A~~~G~L~~G-D~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~L~v~r~~~~~~~~~~~s~~~~~~~~ 1022 (1145)
.|++|..|.++|||+++| |+.| |+|++|||+++.++.+.....+....+..+.|+|.|....
T Consensus 16 ~G~~V~~V~~~SpA~~AG-L~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~---------------- 78 (209)
T 3rle_A 16 EGYHVLRVQENSPGHRAG-LEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTL---------------- 78 (209)
T ss_dssp EEEEEEEECTTSHHHHTT-CCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEETTTC----------------
T ss_pred CEEEEEEECCCCHHHHCC-CCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEecCCc----------------
Confidence 578999999999999999 9999 9999999999998876544333345678899999774211
Q ss_pred CCCCCCCCcccEEEEeec-----CCcceeEEEEccCCc--ccccEEEEEEcCCChhcccCCCCC-CCEEEEECCEEcCCC
Q psy6910 1023 YEEGGEHDEQYHAIELSR-----GTRGFGFSIRGGREF--QNMALFVLQIAENGPAALDGHLKV-GDEIVEINGINTKNM 1094 (1145)
Q Consensus 1023 ~p~~~~~~~~~~~v~l~k-----~~~~lG~sl~gg~~~--~~~~v~V~~V~~gg~A~~~G~L~~-GD~Il~ING~~v~~~ 1094 (1145)
....+.+.. ....||+++...... ...+++|..|.++|||+++| |++ ||+|++|||. +.
T Consensus 79 ---------~~~~v~l~p~~~~~~~~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aG-l~~~GD~I~~ing~-v~-- 145 (209)
T 3rle_A 79 ---------ELRETSVTPSNLWGGQGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAG-LRPHSDYIIGADTV-MN-- 145 (209)
T ss_dssp ---------CEEEEEECCCSSSSSSSSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHT-CCTTTEEEEEESSC-CC--
T ss_pred ---------eEEEEEEcccccccccCccceEEeecChhHccccceEEEEeCCCChHHHCC-CCCCCCEEEECCCE-eC--
Confidence 122333321 123688888642211 13689999999999999999 999 9999999997 76
Q ss_pred CHHHHHHHHHcC-CCeEEEEEEeCCC
Q psy6910 1095 THAEAIEIIRNG-DSTVRLLIKRGGS 1119 (1145)
Q Consensus 1095 s~~eav~~lk~~-~~~v~L~v~R~~~ 1119 (1145)
+++++.++|+.. +..+.|+|.|++.
T Consensus 146 ~~~~l~~~l~~~~g~~v~l~v~r~~~ 171 (209)
T 3rle_A 146 ESEDLFSLIETHEAKPLKLYVYNTDT 171 (209)
T ss_dssp SSSCHHHHHHHTTTSCEEEEEEETTT
T ss_pred CHHHHHHHHHhCCCCeEEEEEEECCc
Confidence 667778888775 5679999988654
No 37
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.51 E-value=5.4e-14 Score=125.34 Aligned_cols=79 Identities=23% Similarity=0.341 Sum_probs=73.2
Q ss_pred ceEeEEEeCCCCCCCceeeeccccCCCceEEEEecCCccccccCCCCCCcEEEeeCCEEecCCCHHHHHHHHHhhcCCCC
Q psy6910 21 KETPVTLTVPPDGSLNFSVGGGSDSGEFAYVTNINKEKVKGAEKYLEEKAIILEIQGQKVAGYTRRDTIAWLNHCCRSGK 100 (1145)
Q Consensus 21 ~v~~~~~~~~~~g~~~~~i~gg~e~g~~~~v~~i~~~~~~~~sg~l~~GD~i~evng~~v~g~~~~~~~~~l~~~~~~~~ 100 (1145)
..++|.|.|++.|.|||+|++| .|.+|++|+.|++.| |.+||+|+||||++|.|++++|+.++|+++ .+
T Consensus 4 ~~r~v~l~k~~~g~~Gf~i~~g-------~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr~~---g~ 72 (82)
T 1r6j_A 4 DPRTITMHKDSTGHVGFIFKNG-------KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTS---GT 72 (82)
T ss_dssp CCEEEEEECCTTSCCCEEEETT-------EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHS---CS
T ss_pred ceEEEEEEECCCCCeEEEEECC-------EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHhcC---CC
Confidence 4588999999999999999986 389999999999999 569999999999999999999999999988 88
Q ss_pred cEEEEEecCC
Q psy6910 101 TLTLRTVSSA 110 (1145)
Q Consensus 101 ~v~~~~~p~~ 110 (1145)
.|+|+|+|+.
T Consensus 73 ~V~L~v~p~~ 82 (82)
T 1r6j_A 73 VVTITIMPAF 82 (82)
T ss_dssp EEEEEEEECC
T ss_pred EEEEEEEeCC
Confidence 9999999963
No 38
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=99.48 E-value=5.4e-14 Score=152.34 Aligned_cols=147 Identities=25% Similarity=0.233 Sum_probs=111.7
Q ss_pred CCcEEEEEecCCccCcccchhccccCCCCchHHHHh-hhhccCcceeecccccCCCCCCCcCCccEEEeCHHHHHHHHHc
Q psy6910 99 GKTLTLRTVSSAYVTTDLRQFLNTRFPKGSVDHDLQ-NIIRDNLYLRTVPVTTRTPRDGELNGVDYTFLSIEEFKQLEKS 177 (1145)
Q Consensus 99 ~~~v~~~~~p~~~~~~~~~~~~~l~f~k~~i~~~l~-~~~~~~~~~~~v~~TTR~~r~~E~~g~~Y~fvs~~~f~~~~~~ 177 (1145)
.|.++..++|+|++ |+|+++.|. ..+ +. +...+.+|||+|+.||++|.+|+|++.+.|..++..
T Consensus 26 ~G~ii~l~Gp~GsG-------------KSTl~~~L~~~~~-~~-~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~ 90 (231)
T 3lnc_A 26 VGVILVLSSPSGCG-------------KTTVANKLLEKQK-NN-IVKSVSVTTRAARKGEKEGKDYYFVDREEFLRLCSN 90 (231)
T ss_dssp CCCEEEEECSCC-----------------CHHHHHHC-----C-EEECCCEESSCCCTTCCBTTTBEECCHHHHHHHHHT
T ss_pred CCCEEEEECCCCCC-------------HHHHHHHHHhcCC-CC-cccccccCCCCCCccccCCCeEEEecHHHhhhhhhc
Confidence 57788888898886 899999988 665 34 456999999999999999999999999999999999
Q ss_pred CCEEEEEEeCCcccCCCccchhhhhcCCCCceeeecCCCChhhhhhhhccc-ccccceeEecCCChhhhhhhhhccCCCC
Q psy6910 178 GCLLESGLYEGNHYGTPKPVKEPYVSLPQNVNLLPGAHPSSEGKRKRNRSN-VEAMASKSIEPDMKTNGFDNKTVNMGNS 256 (1145)
Q Consensus 178 ~~flE~~~~~g~~YGt~~~~i~~~~~~g~~~~~il~~~~~~~~~~~~~~~~-~~~~~~ifi~pps~~~l~~rl~~rg~~s 256 (1145)
+.|++++++.+++||++++.++++++.|+ .|++|+++ .+...+++.+ +.+. .||+.+|+.+++.+||..|+.++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~vild~~~--~g~~~~~~~~~~~~~-~v~v~~~~~~~l~~Rl~~R~~~~ 165 (231)
T 3lnc_A 91 GEIIEHAEVFGNFYGVPRKNLEDNVDKGV--STLLVIDW--QGAFKFMEMMREHVV-SIFIMPPSMEELRRRLCGRRADD 165 (231)
T ss_dssp TCEEEEEEETTEEEEEECTTHHHHHHHTC--EEEEECCH--HHHHHHHHHSGGGEE-EEEEECSCHHHHHHC--------
T ss_pred CceehhhhhccccCCCCHHHHHHHHHcCC--eEEEEcCH--HHHHHHHHhcCCCeE-EEEEECCcHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999977 99999776 5666677777 6777 89999999999999999999899
Q ss_pred cccccccCC
Q psy6910 257 SDYELNDNN 265 (1145)
Q Consensus 257 ~~~i~~~~~ 265 (1145)
.+.+.+|+.
T Consensus 166 ~~~i~~rl~ 174 (231)
T 3lnc_A 166 SEVVEARLK 174 (231)
T ss_dssp ------CHH
T ss_pred HHHHHHHHH
Confidence 888886663
No 39
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.47 E-value=2.1e-13 Score=123.27 Aligned_cols=84 Identities=63% Similarity=1.074 Sum_probs=78.4
Q ss_pred EEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEE
Q psy6910 437 IHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQ 516 (1145)
Q Consensus 437 ~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~ 516 (1145)
++|.|.|+..||||++.+|.+. ..+++|.+|.++|||+++|+|++||+|++|||.++.++++.++.++|+..+.|..|.
T Consensus 2 ~~v~l~k~~~g~G~~i~~~~~~-~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~ 80 (85)
T 2i04_A 2 IHTKLRKSSRGFGFTVVGGDEP-DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVD 80 (85)
T ss_dssp EEEEEECBTTBSSEEEEECCST-TBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEE
T ss_pred EEEEEEECCCCCCEEEEcccCC-CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEE
Confidence 6789999999999999998775 678999999999999999999999999999999999999999999999977789999
Q ss_pred EEEEe
Q psy6910 517 LEVCR 521 (1145)
Q Consensus 517 l~v~R 521 (1145)
|+|.|
T Consensus 81 l~v~R 85 (85)
T 2i04_A 81 LELCR 85 (85)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99976
No 40
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.47 E-value=8.4e-13 Score=140.57 Aligned_cols=155 Identities=16% Similarity=0.117 Sum_probs=111.2
Q ss_pred cccEEEccCCccCCceEEEEeCCCChhhhcCCCCCC-CEEEEECCEecCCCCHHHHHHHHHhccCCCeEEEEEeeccCCC
Q psy6910 831 GFGFRIVGGTEEGSQVSIGHIVPGGAADLDGRLCTG-DEIVSVDNLSVLNSSHHHVVELMGKASVYGRVTLGIRRKVMPP 909 (1145)
Q Consensus 831 glGf~l~gg~~~~~~i~V~~V~pgs~A~~~G~L~~G-D~IlsVNG~~v~~~s~~~~~~~L~~~~~~~~v~L~v~r~~~~~ 909 (1145)
|+|++...+.....+++|..|.++|||+++| |++| |+|++|||.++.++..... .++.. ..+..+.|.|.|....
T Consensus 3 g~~~~~~~~~~~~~G~~V~~V~~~SpA~~AG-L~~G~D~I~~ing~~v~~~~~~~~-~~~~~-~~g~~v~l~v~R~~~~- 78 (209)
T 3rle_A 3 GSSQSVEIPGGGTEGYHVLRVQENSPGHRAG-LEPFFDFIVSINGSRLNKDNDTLK-DLLKA-NVEKPVKMLIYSSKTL- 78 (209)
T ss_dssp -----CCCTTSSSEEEEEEEECTTSHHHHTT-CCTTTEEEEEETTEECCSSSSHHH-HHHHH-TTTSCEEEEEEETTTC-
T ss_pred chhhhhhccCCCCCEEEEEEECCCCHHHHCC-CCcCCeEEEEECCEECcCHHHHHH-HHHhc-CCCCEEEEEEEecCCc-
Confidence 5566665555556789999999999999999 9999 9999999999997654332 33333 3357899999886533
Q ss_pred CcccccCCCCCeEEEEecc----CCCcccEEEeecCC----CCCceEEEeCCCCcccccCCCCC-CCEEEEECCeeeccc
Q psy6910 910 AETTSMMLGYPYDVTITRR----ENEGFGFVIISSLN----KAGSTIGRIIEDSPADRSGELHL-GDHILAVNHVDIMSL 980 (1145)
Q Consensus 910 ~~~~~~~~~~~~~V~l~r~----~~~~lG~~l~~~~~----~~g~~I~~v~~gs~A~~~G~L~~-GD~Il~VNG~~v~~~ 980 (1145)
....+++... ....+|+.+..... ..+++|..|.++|||+++| |++ ||+|++|||. +.++
T Consensus 79 ---------~~~~v~l~p~~~~~~~~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aG-l~~~GD~I~~ing~-v~~~ 147 (209)
T 3rle_A 79 ---------ELRETSVTPSNLWGGQGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAG-LRPHSDYIIGADTV-MNES 147 (209)
T ss_dssp ---------CEEEEEECCCSSSSSSSSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHT-CCTTTEEEEEESSC-CCSS
T ss_pred ---------eEEEEEEcccccccccCccceEEeecChhHccccceEEEEeCCCChHHHCC-CCCCCCEEEECCCE-eCCH
Confidence 1234444322 23468888763211 1578999999999999999 999 9999999998 7655
Q ss_pred CHHHHHHHHHc-CCCEEEEEEeC
Q psy6910 981 HHGEIVNLIKD-SGYCVTLTIGA 1002 (1145)
Q Consensus 981 ~~~~~~~~l~~-~~~~v~L~v~r 1002 (1145)
. ++..+++. .++.+.|+|.|
T Consensus 148 ~--~l~~~l~~~~g~~v~l~v~r 168 (209)
T 3rle_A 148 E--DLFSLIETHEAKPLKLYVYN 168 (209)
T ss_dssp S--CHHHHHHHTTTSCEEEEEEE
T ss_pred H--HHHHHHHhCCCCeEEEEEEE
Confidence 4 45555555 57889999976
No 41
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=99.47 E-value=4.3e-13 Score=158.67 Aligned_cols=149 Identities=17% Similarity=0.200 Sum_probs=110.6
Q ss_pred CCceEEEeCCCCcccccCCCCCCCEEEEECCeeecccCHHHHHHHHHcCCCEEEEEEeCCCCCCCCCCCcccCccCCCCC
Q psy6910 944 AGSTIGRIIEDSPADRSGELHLGDHILAVNHVDIMSLHHGEIVNLIKDSGYCVTLTIGAPISGDDASSTTSVSAASHREY 1023 (1145)
Q Consensus 944 ~g~~I~~v~~gs~A~~~G~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~L~v~r~~~~~~~~~~~s~~~~~~~~~ 1023 (1145)
.+++|..|.++|||+++| |+.||+|++|||+++.++.+..........++.+.|+|.|......
T Consensus 263 ~G~~V~~V~~~spA~~aG-L~~GD~I~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~--------------- 326 (436)
T 4a8c_A 263 RGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLE--------------- 326 (436)
T ss_pred cceEEEEECCCChHHHCC-CCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEEEE---------------
Confidence 488999999999999999 9999999999999998765433332233467899999987432111
Q ss_pred CCCCCCCcccEEEEeecC--------CcceeEEEEccCC----cccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEc
Q psy6910 1024 EEGGEHDEQYHAIELSRG--------TRGFGFSIRGGRE----FQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINT 1091 (1145)
Q Consensus 1024 p~~~~~~~~~~~v~l~k~--------~~~lG~sl~gg~~----~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v 1091 (1145)
..+.+... ...+|+......+ ....+++|..|.++|+|+++| |++||+|++|||+++
T Consensus 327 ----------~~v~l~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v 395 (436)
T 4a8c_A 327 ----------VEVTLDTSTSSSASAEMITPALEGATLSDGQLKDGGKGIKIDEVVKGSPAAQAG-LQKDDVIIGVNRDRV 395 (436)
T ss_pred ----------EEEEECCCCcccccccccccCceeeecccccccCCCCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEC
Confidence 11111100 0113433322211 113589999999999999999 999999999999999
Q ss_pred CCCCHHHHHHHHHcCCCeEEEEEEeCCCcC
Q psy6910 1092 KNMTHAEAIEIIRNGDSTVRLLIKRGGSVV 1121 (1145)
Q Consensus 1092 ~~~s~~eav~~lk~~~~~v~L~v~R~~~~~ 1121 (1145)
. +++++.++|+..++.+.|+|.|++..+
T Consensus 396 ~--~~~~~~~~l~~~~~~v~l~v~R~g~~~ 423 (436)
T 4a8c_A 396 N--SIAEMRKVLAAKPAIIALQIVRGNESI 423 (436)
T ss_pred C--CHHHHHHHHHhCCCeEEEEEEECCEEE
Confidence 8 789999999998788999999988654
No 42
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.46 E-value=2.2e-13 Score=133.70 Aligned_cols=90 Identities=20% Similarity=0.348 Sum_probs=80.3
Q ss_pred ccceEEEEEEecccceeEEEecCCCCC--CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Q psy6910 433 IGERIHSSLVKSLRGLGFTIVGGDDSK--EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSIS 510 (1145)
Q Consensus 433 ~g~~~~v~l~k~~~glG~~i~gg~~~~--~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~ 510 (1145)
..+.+.|.|.|+..||||+|.||.+.. ..+++|.+|.++|||+++|.|++||+|++|||+++.+++|++++++|+..+
T Consensus 27 ~~~~~~v~l~k~~~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 106 (130)
T 1i16_A 27 EATVCTVTLEKMSAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALP 106 (130)
T ss_dssp SEEEEEEEEETTSSSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSC
T ss_pred CCcEEEEEEEcCCCccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 457788999999999999999998731 457999999999999999779999999999999999999999999999953
Q ss_pred CCCeEEEEEEeCC
Q psy6910 511 PGETVQLEVCRGY 523 (1145)
Q Consensus 511 ~g~~v~l~v~R~~ 523 (1145)
+..|.|+|+|..
T Consensus 107 -~~~v~l~v~r~~ 118 (130)
T 1i16_A 107 -DGPVTIVIRRKS 118 (130)
T ss_dssp -SSEEEEEEEEES
T ss_pred -CceEEEEEEeCC
Confidence 567999999873
No 43
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.44 E-value=9.6e-14 Score=135.60 Aligned_cols=99 Identities=23% Similarity=0.369 Sum_probs=82.6
Q ss_pred ccCCCCcCccceEEEEEE-ecccceeEEEecCCCC---CCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHH
Q psy6910 425 FTLNPDELIGERIHSSLV-KSLRGLGFTIVGGDDS---KEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHH 500 (1145)
Q Consensus 425 ~~~~p~~~~g~~~~v~l~-k~~~glG~~i~gg~~~---~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~ 500 (1145)
+...|.+..-..+.|.|. +...||||+|.++.+. ...+++|.+|.++|||+++|+|++||+|++|||+++.+++|.
T Consensus 15 ~~~~~~~~~~~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~ 94 (127)
T 1wg6_A 15 YALSLESSEQLTLEIPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNH 94 (127)
T ss_dssp CCSSCCCCEEEEEEEECSSSTTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHH
T ss_pred cccCCCCCCceEEEEEEeeCCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH
Confidence 334444444556778887 5778999999998653 134799999999999999999999999999999999999999
Q ss_pred HHHHHHhcC-----CCCCeEEEEEEeCC
Q psy6910 501 DMVSVFQSI-----SPGETVQLEVCRGY 523 (1145)
Q Consensus 501 ~~~~~l~~~-----~~g~~v~l~v~R~~ 523 (1145)
+++++|+.. +.|..|+|+|.|..
T Consensus 95 ~~~~~l~~~~~~~g~~~~~v~l~v~R~~ 122 (127)
T 1wg6_A 95 EAMETLRRSMSMEGNIRGMIQLVILRRS 122 (127)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEEEEECS
T ss_pred HHHHHHHHhhccccCCCCEEEEEEEeCC
Confidence 999999974 34789999999974
No 44
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.44 E-value=4.2e-13 Score=126.77 Aligned_cols=85 Identities=26% Similarity=0.377 Sum_probs=75.0
Q ss_pred CccceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy6910 432 LIGERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISP 511 (1145)
Q Consensus 432 ~~g~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~ 511 (1145)
..++.++|.|.|+..||||+|.++.. +.+|++|.+ +|. ++.|++||+|++|||+++.+++|.|++++|++++.
T Consensus 9 ~~~~~~~V~L~Kg~~G~GFsI~~~~~----g~~V~~I~~--~~~-~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~ 81 (113)
T 3soe_A 9 KAGLLVTIPLIKGPKGFGFAIADSPT----GQKVKMILD--SQW-CQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPV 81 (113)
T ss_dssp HHCEEEEEEEECBTTBSSEEEEEETT----EEEEEEESC--GGG-STTCCTTCEEEEETTEECTTSCHHHHHHHHHHSCT
T ss_pred CCCCEEEEEEEECCCcccEEEeCCCC----CcEEEEecC--hHH-hCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 36788999999999999999977633 467999998 454 55599999999999999999999999999999888
Q ss_pred CCeEEEEEEeCC
Q psy6910 512 GETVQLEVCRGY 523 (1145)
Q Consensus 512 g~~v~l~v~R~~ 523 (1145)
|..|+|+|.|+.
T Consensus 82 G~~v~L~V~R~g 93 (113)
T 3soe_A 82 GADVPLLILRGG 93 (113)
T ss_dssp TCEEEEEEEESS
T ss_pred CCEEEEEEEECC
Confidence 999999999984
No 45
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.43 E-value=2.2e-13 Score=124.64 Aligned_cols=87 Identities=31% Similarity=0.498 Sum_probs=78.9
Q ss_pred ceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCe
Q psy6910 435 ERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGET 514 (1145)
Q Consensus 435 ~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~ 514 (1145)
+...|.|.|+..||||++.+|.+. ..+++|.+|.++|||+++|+|++||+|++|||.++.++++.+++.+|+..+.+..
T Consensus 2 ~~~~v~l~~~~~g~G~~~~~g~~~-~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~ 80 (90)
T 2q9v_A 2 MEQDIFLWRKETGFGFRILGGNEP-GEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGH 80 (90)
T ss_dssp EEEEEEEECBTTBCCEEEEECSST-TSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTE
T ss_pred CcEEEEEEECCCccCEEEEccccC-CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCe
Confidence 457899999999999999999776 5679999999999999999999999999999999999999999999998544558
Q ss_pred EEEEEEeC
Q psy6910 515 VQLEVCRG 522 (1145)
Q Consensus 515 v~l~v~R~ 522 (1145)
|.|+|.|.
T Consensus 81 v~l~v~R~ 88 (90)
T 2q9v_A 81 VNLTVRQT 88 (90)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 99999885
No 46
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.43 E-value=3.6e-13 Score=127.69 Aligned_cols=89 Identities=33% Similarity=0.531 Sum_probs=80.0
Q ss_pred ccceEEEEEEecccceeEEEecCCCC---CCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Q psy6910 433 IGERIHSSLVKSLRGLGFTIVGGDDS---KEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSI 509 (1145)
Q Consensus 433 ~g~~~~v~l~k~~~glG~~i~gg~~~---~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~ 509 (1145)
..+...|.|.|...||||+|.+|.+. ...+++|.+|.++|||+++|+|++||+|++|||+++.+++|.+++++|+..
T Consensus 13 ~~~~~~v~l~k~~~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 92 (108)
T 2d92_A 13 SPEVKIVELVKDCKGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAV 92 (108)
T ss_dssp CSSCEEEEEEECSSCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHS
T ss_pred CCceEEEEEEECCCccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 44568899999999999999998663 246799999999999999999999999999999999999999999999996
Q ss_pred CCCCeEEEEEEeC
Q psy6910 510 SPGETVQLEVCRG 522 (1145)
Q Consensus 510 ~~g~~v~l~v~R~ 522 (1145)
+ +..|.|+|.|.
T Consensus 93 ~-~~~v~l~v~R~ 104 (108)
T 2d92_A 93 P-PGLVHLGICSG 104 (108)
T ss_dssp C-SEEEEEEEECC
T ss_pred C-CCeEEEEEEcC
Confidence 4 45899999986
No 47
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.43 E-value=3.7e-13 Score=119.92 Aligned_cols=75 Identities=23% Similarity=0.410 Sum_probs=68.4
Q ss_pred eEEEEEEeccc-ceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCe
Q psy6910 436 RIHSSLVKSLR-GLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGET 514 (1145)
Q Consensus 436 ~~~v~l~k~~~-glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~ 514 (1145)
...|.|.|+.. +|||++.+| +|.+|.++|||+++| |++||+|++|||+++.+++|+|++++||+ .|..
T Consensus 5 ~r~v~l~k~~~g~~Gf~i~~g--------~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr~--~g~~ 73 (82)
T 1r6j_A 5 PRTITMHKDSTGHVGFIFKNG--------KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILST--SGTV 73 (82)
T ss_dssp CEEEEEECCTTSCCCEEEETT--------EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHH--SCSE
T ss_pred eEEEEEEECCCCCeEEEEECC--------EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHhc--CCCE
Confidence 46799999875 699999876 389999999999999 99999999999999999999999999996 7899
Q ss_pred EEEEEEe
Q psy6910 515 VQLEVCR 521 (1145)
Q Consensus 515 v~l~v~R 521 (1145)
|+|+|..
T Consensus 74 V~L~v~p 80 (82)
T 1r6j_A 74 VTITIMP 80 (82)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9999864
No 48
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.42 E-value=4.2e-13 Score=127.35 Aligned_cols=88 Identities=24% Similarity=0.447 Sum_probs=78.5
Q ss_pred cceEEEEEEecccceeEEEecCCCCC-CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC--
Q psy6910 434 GERIHSSLVKSLRGLGFTIVGGDDSK-EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSIS-- 510 (1145)
Q Consensus 434 g~~~~v~l~k~~~glG~~i~gg~~~~-~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~-- 510 (1145)
.+...|.+.|+ .||||+|.||.+.. ..+++|.+|.++|||+++|+|++||+|++|||+++.+++|++++++|++.+
T Consensus 14 ~~~~~v~l~k~-~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r 92 (109)
T 1wi4_A 14 PAFRVITVTKE-TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLR 92 (109)
T ss_dssp TTEEEEEECCS-SCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCS
T ss_pred CcEEEEEEeCC-CccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccccC
Confidence 34577888886 89999999997753 336999999999999999999999999999999999999999999999975
Q ss_pred CCCeEEEEEEeC
Q psy6910 511 PGETVQLEVCRG 522 (1145)
Q Consensus 511 ~g~~v~l~v~R~ 522 (1145)
.+..++|.+.|.
T Consensus 93 ~~~~~~l~v~R~ 104 (109)
T 1wi4_A 93 SESPWEIAFIRS 104 (109)
T ss_dssp SSSCEEEEEECC
T ss_pred CCceEEEEEEeC
Confidence 478999999886
No 49
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.42 E-value=5.9e-13 Score=128.04 Aligned_cols=87 Identities=30% Similarity=0.527 Sum_probs=79.1
Q ss_pred cceEEEEEEecccceeEEEecCCCCC----CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Q psy6910 434 GERIHSSLVKSLRGLGFTIVGGDDSK----EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSI 509 (1145)
Q Consensus 434 g~~~~v~l~k~~~glG~~i~gg~~~~----~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~ 509 (1145)
.+...|.|.|+..||||+|.||.+.. ..+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++.+|+.
T Consensus 23 ~~~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~- 101 (117)
T 2byg_A 23 MTVVEIKLFKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKN- 101 (117)
T ss_dssp EEEEEEEEECBTTBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT-
T ss_pred CceEEEEEEeCCCCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-
Confidence 35678899999999999999987642 4579999999999999999999999999999999999999999999998
Q ss_pred CCCCeEEEEEEeC
Q psy6910 510 SPGETVQLEVCRG 522 (1145)
Q Consensus 510 ~~g~~v~l~v~R~ 522 (1145)
.|..|+|+|.|+
T Consensus 102 -~g~~v~l~v~R~ 113 (117)
T 2byg_A 102 -TSEVVYLKVGKP 113 (117)
T ss_dssp -CCSEEEEEEEEE
T ss_pred -CCCeEEEEEEeC
Confidence 578999999886
No 50
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=99.42 E-value=2.3e-13 Score=144.13 Aligned_cols=147 Identities=22% Similarity=0.211 Sum_probs=131.9
Q ss_pred CCcEEEEEecCCccCcccchhccccCCCCchHHHHhhhhccCcceeecccccCCCCCCCcCCccEEEeCHHHHHHHHHcC
Q psy6910 99 GKTLTLRTVSSAYVTTDLRQFLNTRFPKGSVDHDLQNIIRDNLYLRTVPVTTRTPRDGELNGVDYTFLSIEEFKQLEKSG 178 (1145)
Q Consensus 99 ~~~v~~~~~p~~~~~~~~~~~~~l~f~k~~i~~~l~~~~~~~~~~~~v~~TTR~~r~~E~~g~~Y~fvs~~~f~~~~~~~ 178 (1145)
.|.++..++|+|++ |+|+++.|...+ +. +.....++||.++.++..|..|+|.+.+.|..+...+
T Consensus 6 ~g~ii~l~Gp~GsG-------------KSTl~~~L~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (205)
T 3tr0_A 6 KANLFIISAPSGAG-------------KTSLVRALVKAL-AE-IKISISHTTRPKRPGDQEGVDYFFIDETRFQAMVKEG 70 (205)
T ss_dssp CCCEEEEECCTTSC-------------HHHHHHHHHHHS-SS-EEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHHT
T ss_pred CCcEEEEECcCCCC-------------HHHHHHHHHhhC-CC-eEEeceeccCCCchhHhcCceEEeccHHHHHHHHhcC
Confidence 78999999999996 889998887775 44 4458899999999999999999999999999999999
Q ss_pred CEEEEEEeCCcccCCCccchhhhhcCCCCceeeecCCCChhhhhhhhcccccccceeEecCCChhhhhhhhhccCCCCcc
Q psy6910 179 CLLESGLYEGNHYGTPKPVKEPYVSLPQNVNLLPGAHPSSEGKRKRNRSNVEAMASKSIEPDMKTNGFDNKTVNMGNSSD 258 (1145)
Q Consensus 179 ~flE~~~~~g~~YGt~~~~i~~~~~~g~~~~~il~~~~~~~~~~~~~~~~~~~~~~ifi~pps~~~l~~rl~~rg~~s~~ 258 (1145)
.|++++.+++++||++++.++++++.|+ .+++|+++ ++...+++.++.+. .||+.+|+.+++.+||..|++++.+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~i~~~l~~g~--~vi~d~~~--~~~~~~~~~~~~~~-~v~~~~~~~e~l~~Rl~~R~~~~~~ 145 (205)
T 3tr0_A 71 AFLEHATIYERHYGTEKDWVLRQLKAGR--DVLLEIDW--QGARQIRELFPPAL-SIFILPPSIEALRERLIKRRQDDTA 145 (205)
T ss_dssp CEEEEEEETTEEEEEEHHHHHHHHHTTC--EEEEECCH--HHHHHHHHHCTTCE-EEEEECSCHHHHHHHHHTCTTSCSS
T ss_pred cEEeeeeeecccccchHHHHHHHHHcCC--eEEEEECH--HHHHHHHHhCCCcE-EEEEECcCHHHHHHHHHHhCCCCHH
Confidence 9999999999999999999999999977 99999765 66777788888887 8999999999999999999999999
Q ss_pred cccccCC
Q psy6910 259 YELNDNN 265 (1145)
Q Consensus 259 ~i~~~~~ 265 (1145)
.+++|+.
T Consensus 146 ~i~~rl~ 152 (205)
T 3tr0_A 146 IIEQRLA 152 (205)
T ss_dssp THHHHHH
T ss_pred HHHHHHH
Confidence 9887764
No 51
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.42 E-value=8.7e-13 Score=122.16 Aligned_cols=88 Identities=28% Similarity=0.525 Sum_probs=81.1
Q ss_pred ccceEEEEEEecccceeEEEecCCCCC--CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Q psy6910 433 IGERIHSSLVKSLRGLGFTIVGGDDSK--EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSIS 510 (1145)
Q Consensus 433 ~g~~~~v~l~k~~~glG~~i~gg~~~~--~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~ 510 (1145)
.|+.++|.|.|+..+|||+|.+|.+.. ..+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++.+|+.
T Consensus 3 ~g~~~~v~l~k~~~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~-- 80 (96)
T 1d5g_A 3 PGDIFEVELAKNDNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN-- 80 (96)
T ss_dssp TTCEEEEEEECSSSSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHS--
T ss_pred CCCEEEEEEEeCCCCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--
Confidence 578899999999999999999987642 4579999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEEEeC
Q psy6910 511 PGETVQLEVCRG 522 (1145)
Q Consensus 511 ~g~~v~l~v~R~ 522 (1145)
.|..|.|+|.|+
T Consensus 81 ~g~~v~l~v~R~ 92 (96)
T 1d5g_A 81 TGQVVHLLLEKG 92 (96)
T ss_dssp CCSEEEEEEECC
T ss_pred CCCeEEEEEEcC
Confidence 588999999886
No 52
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=99.41 E-value=7.3e-13 Score=157.01 Aligned_cols=146 Identities=18% Similarity=0.256 Sum_probs=109.8
Q ss_pred CCceEEEeCCCCcccccCCCCCCCEEEEECCeeecccCHHHHHHHHH--cCCCEEEEEEeCCCCCCCCCCCcccCccCCC
Q psy6910 944 AGSTIGRIIEDSPADRSGELHLGDHILAVNHVDIMSLHHGEIVNLIK--DSGYCVTLTIGAPISGDDASSTTSVSAASHR 1021 (1145)
Q Consensus 944 ~g~~I~~v~~gs~A~~~G~L~~GD~Il~VNG~~v~~~~~~~~~~~l~--~~~~~v~L~v~r~~~~~~~~~~~s~~~~~~~ 1021 (1145)
.+++|..|.++|||+++| |+.||+|++|||+++.++. ++..++. ..++.+.|+|.|.....
T Consensus 282 ~G~~V~~V~~~spA~~aG-L~~GDvI~~vnG~~v~~~~--~l~~~l~~~~~g~~v~l~V~R~g~~~-------------- 344 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAG-LKAGDIITQINDTKITQAT--QVKTTISLLRVGSTVKIIVERDNKPL-------------- 344 (451)
T ss_dssp CCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCSHH--HHHHHHHTSCTTCEEEEEEEETTEEE--------------
T ss_pred ceEEEEecCCCChHHHcC-CCCCCEEEEECCEEcCCHH--HHHHHHHhcCCCCEEEEEEEECCEEE--------------
Confidence 488999999999999999 9999999999999998764 4445554 46789999998742211
Q ss_pred CCCCCCCCCcccEEEEeecC-----------CcceeEEEEc--cCC---cccccEEEEEEcCCChhcccCCCCCCCEEEE
Q psy6910 1022 EYEEGGEHDEQYHAIELSRG-----------TRGFGFSIRG--GRE---FQNMALFVLQIAENGPAALDGHLKVGDEIVE 1085 (1145)
Q Consensus 1022 ~~p~~~~~~~~~~~v~l~k~-----------~~~lG~sl~g--g~~---~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ 1085 (1145)
...+.+... ...+|+.+.. ... ....+++|..|.++|+|+++| |++||+|++
T Consensus 345 -----------~~~v~l~~~~~~~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~Gv~V~~V~~gspA~~aG-L~~GD~I~~ 412 (451)
T 3pv2_A 345 -----------TLSAVVTDIKSHEQKLQSNNPFLYGLALRAFEQESPPHGNVIGVQVVGASENSAGWRAG-IRPGDIIIS 412 (451)
T ss_dssp -----------EEEEECBCHHHHHHHHHHHSTTTTTEEEEEEEEECTTSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEE
T ss_pred -----------EEEEEEccCCccccccccccccccccccccCChhHhcccCCCceEEEEECCCCHHHHcC-CCCCCEEEE
Confidence 111111110 1123343331 110 013578999999999999999 999999999
Q ss_pred ECCEEcCCCCHHHHHHHHHcCCCeEEEEEEeCCCc
Q psy6910 1086 INGINTKNMTHAEAIEIIRNGDSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1086 ING~~v~~~s~~eav~~lk~~~~~v~L~v~R~~~~ 1120 (1145)
|||+++. +++++.++|+..+..+.|+|.|++..
T Consensus 413 Vng~~v~--~~~~~~~~l~~~~~~v~l~v~R~g~~ 445 (451)
T 3pv2_A 413 ANKKPVT--DVKSLQTIAQEKKKELLVQVLRGPGS 445 (451)
T ss_dssp ETTEECC--SHHHHHHHTTSSCSCEEEEEEETTEE
T ss_pred ECCEECC--CHHHHHHHHhcCCCeEEEEEEECCEE
Confidence 9999998 78999999999778899999998754
No 53
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.41 E-value=1.8e-13 Score=128.53 Aligned_cols=90 Identities=31% Similarity=0.488 Sum_probs=81.3
Q ss_pred ccceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Q psy6910 433 IGERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPG 512 (1145)
Q Consensus 433 ~g~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g 512 (1145)
..+.+.+.|.+...||||+|.+|.+. ..+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++++|+..+.|
T Consensus 7 ~~~~~~v~l~~~~~g~G~~i~~g~~~-~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g 85 (103)
T 1uep_A 7 GYKELDVHLRRMESGFGFRILGGDEP-GQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARN 85 (103)
T ss_dssp SEEEECCEEESSSSSCCEEECCCCST-TSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHH
T ss_pred CceEEEEEEEeCCCccCEEEeeecCC-CCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 34567889999999999999998765 67899999999999999999999999999999999999999999999985447
Q ss_pred CeEEEEEEeCC
Q psy6910 513 ETVQLEVCRGY 523 (1145)
Q Consensus 513 ~~v~l~v~R~~ 523 (1145)
..|+|+|.|+.
T Consensus 86 ~~v~l~v~R~~ 96 (103)
T 1uep_A 86 GQVNLTVRRKV 96 (103)
T ss_dssp TEEEEEEEEEC
T ss_pred CcEEEEEEeCC
Confidence 89999999874
No 54
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.41 E-value=1.1e-12 Score=122.05 Aligned_cols=88 Identities=30% Similarity=0.462 Sum_probs=80.8
Q ss_pred ccceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Q psy6910 433 IGERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPG 512 (1145)
Q Consensus 433 ~g~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g 512 (1145)
.|+.+.|.|.|+..||||+|.++.+....+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++.+++. .+
T Consensus 2 ~g~~~~v~l~~~~~~lG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~ 79 (98)
T 2opg_A 2 MGCETTIEISKGRTGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQ--TP 79 (98)
T ss_dssp CCEEEEEEEECBTTBTCEEEEECTTSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT--CC
T ss_pred CCCEEEEEEEECCCcccEEEecCCCCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CC
Confidence 3778999999999999999999877544689999999999999999999999999999999999999999999998 45
Q ss_pred CeEEEEEEeC
Q psy6910 513 ETVQLEVCRG 522 (1145)
Q Consensus 513 ~~v~l~v~R~ 522 (1145)
..|.|+|.|+
T Consensus 80 ~~v~l~v~R~ 89 (98)
T 2opg_A 80 QRVRLTLYRD 89 (98)
T ss_dssp SEEEEEEEEC
T ss_pred CeEEEEEEcC
Confidence 7999999986
No 55
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.40 E-value=1.1e-12 Score=123.69 Aligned_cols=87 Identities=29% Similarity=0.518 Sum_probs=79.6
Q ss_pred ceEEEEEEecccceeEEEecCCCCC----CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Q psy6910 435 ERIHSSLVKSLRGLGFTIVGGDDSK----EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSIS 510 (1145)
Q Consensus 435 ~~~~v~l~k~~~glG~~i~gg~~~~----~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~ 510 (1145)
+.++|.|.|+..||||+|.||.+.. ..+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++.+++.
T Consensus 3 ~~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-- 80 (105)
T 2awx_A 3 KIMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKN-- 80 (105)
T ss_dssp CEEEEEEECBTTBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHS--
T ss_pred eEEEEEEEECCCCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--
Confidence 4689999999999999999987642 3579999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEEEeCC
Q psy6910 511 PGETVQLEVCRGY 523 (1145)
Q Consensus 511 ~g~~v~l~v~R~~ 523 (1145)
.|..|.|+|.|..
T Consensus 81 ~~~~v~l~v~R~~ 93 (105)
T 2awx_A 81 TSDFVYLKVAKPT 93 (105)
T ss_dssp CCSEEEEEEECCC
T ss_pred CCCeEEEEEEcCC
Confidence 5789999999974
No 56
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.40 E-value=7.6e-13 Score=128.77 Aligned_cols=92 Identities=27% Similarity=0.497 Sum_probs=84.8
Q ss_pred CCcCccceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy6910 429 PDELIGERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQS 508 (1145)
Q Consensus 429 p~~~~g~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~ 508 (1145)
...+.++.+.|.|.|+..||||+|.++.+....+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++.+|+.
T Consensus 19 ~~~~~~~~~~v~l~k~~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~ 98 (124)
T 2daz_A 19 YADLPGELHIIELEKDKNGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKT 98 (124)
T ss_dssp STTSSSEEEEEEEECCSSCCCEEEECBSSTTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHH
T ss_pred hccCCCceEEEEEEeCCCccCEEEeccCCCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 45668899999999999999999999977656789999999999999999999999999999999999999999999998
Q ss_pred CCCCCeEEEEEEeC
Q psy6910 509 ISPGETVQLEVCRG 522 (1145)
Q Consensus 509 ~~~g~~v~l~v~R~ 522 (1145)
.+..|.|+|.|.
T Consensus 99 --~~~~v~l~v~R~ 110 (124)
T 2daz_A 99 --APSKVKLVFIRN 110 (124)
T ss_dssp --SCSEEEEEEEEC
T ss_pred --CCCeEEEEEEeC
Confidence 467999999987
No 57
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.40 E-value=1.5e-12 Score=121.73 Aligned_cols=88 Identities=34% Similarity=0.551 Sum_probs=80.1
Q ss_pred cceEEEEEEecccceeEEEecCCCCC----CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Q psy6910 434 GERIHSSLVKSLRGLGFTIVGGDDSK----EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSI 509 (1145)
Q Consensus 434 g~~~~v~l~k~~~glG~~i~gg~~~~----~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~ 509 (1145)
.....|.|.|+..||||+|.+|.+.. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++.
T Consensus 6 ~~~~~v~l~~~~~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~- 84 (101)
T 2jik_A 6 VTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRN- 84 (101)
T ss_dssp EEEEEEEEECCTTCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHT-
T ss_pred CccEEEEEEeCCCCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-
Confidence 45688999999999999999997753 4689999999999999999999999999999999999999999999998
Q ss_pred CCCCeEEEEEEeCC
Q psy6910 510 SPGETVQLEVCRGY 523 (1145)
Q Consensus 510 ~~g~~v~l~v~R~~ 523 (1145)
.|..|.|+|.|+.
T Consensus 85 -~g~~v~l~v~R~~ 97 (101)
T 2jik_A 85 -AGYAVSLRVQHRL 97 (101)
T ss_dssp -CCSEEEEEEEEES
T ss_pred -CCCeEEEEEEeCC
Confidence 5789999998873
No 58
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.39 E-value=1.1e-12 Score=122.84 Aligned_cols=87 Identities=31% Similarity=0.474 Sum_probs=79.6
Q ss_pred ceEEEEEEecccceeEEEecCCCCC----CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Q psy6910 435 ERIHSSLVKSLRGLGFTIVGGDDSK----EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSIS 510 (1145)
Q Consensus 435 ~~~~v~l~k~~~glG~~i~gg~~~~----~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~ 510 (1145)
+.+.|.|.|+..||||+|.+|.+.+ ..+++|.+|.++|||+++|+|++||+|++|||.++.++++.+++.+++.
T Consensus 4 ~~~~v~l~k~~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-- 81 (102)
T 2i1n_A 4 KYEEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKE-- 81 (102)
T ss_dssp EEEEEEEECBTTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH--
T ss_pred eEEEEEEEECCCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--
Confidence 5688999999999999999987642 4589999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEEEeCC
Q psy6910 511 PGETVQLEVCRGY 523 (1145)
Q Consensus 511 ~g~~v~l~v~R~~ 523 (1145)
.|..|.|+|.|+.
T Consensus 82 ~g~~v~l~v~R~~ 94 (102)
T 2i1n_A 82 AGPVVRLVVRRRQ 94 (102)
T ss_dssp SCSEEEEEEEEEC
T ss_pred CCCeEEEEEEeCC
Confidence 5889999999874
No 59
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.39 E-value=1.6e-12 Score=123.03 Aligned_cols=91 Identities=32% Similarity=0.464 Sum_probs=80.8
Q ss_pred ccceEEEEEEecccceeEEEecCCCC-------CCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHH
Q psy6910 433 IGERIHSSLVKSLRGLGFTIVGGDDS-------KEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSV 505 (1145)
Q Consensus 433 ~g~~~~v~l~k~~~glG~~i~gg~~~-------~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~ 505 (1145)
..+.++|.|.|+..||||+|.++.+. ...+++|.+|.++|||+++|.|++||+|++|||+++.+++|.+++.+
T Consensus 6 ~~~~~~v~l~k~~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~ 85 (107)
T 1uhp_A 6 SGKSLTLVLHRDSGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEA 85 (107)
T ss_dssp SSEEEEEEECCSSSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHH
T ss_pred CcEEEEEEEEeCCCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 45678999999999999999998752 24579999999999999995699999999999999999999999999
Q ss_pred HhcCCCCCeEEEEEEeCCCC
Q psy6910 506 FQSISPGETVQLEVCRGYPL 525 (1145)
Q Consensus 506 l~~~~~g~~v~l~v~R~~~~ 525 (1145)
|+. .+..|.|+|.|..+.
T Consensus 86 ~~~--~~~~v~l~v~R~~~~ 103 (107)
T 1uhp_A 86 FKT--AKEPIVVQVLRRTSG 103 (107)
T ss_dssp HHH--CCSSEEEEEEECCSS
T ss_pred HHc--CCCcEEEEEEeCCCC
Confidence 998 578999999987543
No 60
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.39 E-value=1.1e-12 Score=126.08 Aligned_cols=88 Identities=20% Similarity=0.337 Sum_probs=78.0
Q ss_pred ccceEEEEEEecc-cceeEEEecCCCC--CCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Q psy6910 433 IGERIHSSLVKSL-RGLGFTIVGGDDS--KEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSI 509 (1145)
Q Consensus 433 ~g~~~~v~l~k~~-~glG~~i~gg~~~--~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~ 509 (1145)
......|.|.|+. .||||+|.||.+. ...+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++.+|+.
T Consensus 22 ~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~- 100 (118)
T 3b76_A 22 SMHEKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKR- 100 (118)
T ss_dssp EEEEEEEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHS-
T ss_pred CCCcEEEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-
Confidence 3455778888885 7999999999753 24579999999999999999999999999999999999999999999998
Q ss_pred CCCCeEEEEEEeC
Q psy6910 510 SPGETVQLEVCRG 522 (1145)
Q Consensus 510 ~~g~~v~l~v~R~ 522 (1145)
.+..|+|+|.|.
T Consensus 101 -~~~~v~L~v~R~ 112 (118)
T 3b76_A 101 -TSSSIVLKALEV 112 (118)
T ss_dssp -CCSEEEEEEEEE
T ss_pred -CCCeEEEEEEEC
Confidence 578999999885
No 61
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.39 E-value=1.3e-12 Score=124.17 Aligned_cols=91 Identities=25% Similarity=0.434 Sum_probs=82.7
Q ss_pred CcCccceEEEEEEecccceeEEEecCCCCC--CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy6910 430 DELIGERIHSSLVKSLRGLGFTIVGGDDSK--EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQ 507 (1145)
Q Consensus 430 ~~~~g~~~~v~l~k~~~glG~~i~gg~~~~--~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~ 507 (1145)
+.-.++.+.|.|.|+..||||+|.+|.+.. ..+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++.+++
T Consensus 3 s~~~~~~~~v~l~~~~~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 82 (110)
T 1um1_A 3 SGSSGYVFTVELERGPSGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIR 82 (110)
T ss_dssp CCSCCCEEEEEEECCTTCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHH
T ss_pred CCCCCcEEEEEEEECCCccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 344678899999999999999999987642 457999999999999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEEEEeC
Q psy6910 508 SISPGETVQLEVCRG 522 (1145)
Q Consensus 508 ~~~~g~~v~l~v~R~ 522 (1145)
. .|..|.|+|.|.
T Consensus 83 ~--~~~~v~l~v~R~ 95 (110)
T 1um1_A 83 H--GGKKMRFLVAKS 95 (110)
T ss_dssp T--CCSEEEEEEECC
T ss_pred c--CCCeEEEEEEeC
Confidence 8 588999999986
No 62
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.39 E-value=9e-13 Score=124.25 Aligned_cols=89 Identities=30% Similarity=0.428 Sum_probs=80.7
Q ss_pred ccceEEEEEEecccceeEEEecCCCC-----CCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy6910 433 IGERIHSSLVKSLRGLGFTIVGGDDS-----KEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQ 507 (1145)
Q Consensus 433 ~g~~~~v~l~k~~~glG~~i~gg~~~-----~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~ 507 (1145)
..+.+.|.|.|+..||||+|.+|.+. ...+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++.+|+
T Consensus 5 ~~~~~~v~l~~~~~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~ 84 (105)
T 1wha_A 5 SSGRHVACLARSERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLT 84 (105)
T ss_dssp CCEEEEEEECCCTTCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHT
T ss_pred CCeeEEEEEEeCCCccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 34678999999999999999998772 2468999999999999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEEEEeCC
Q psy6910 508 SISPGETVQLEVCRGY 523 (1145)
Q Consensus 508 ~~~~g~~v~l~v~R~~ 523 (1145)
. .|..|.|+|.|+.
T Consensus 85 ~--~g~~v~l~v~R~~ 98 (105)
T 1wha_A 85 A--ASPTIALLLEREA 98 (105)
T ss_dssp S--CCSCEEEEEEECC
T ss_pred c--CCCeEEEEEEECC
Confidence 8 4789999999973
No 63
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.39 E-value=5.5e-13 Score=125.13 Aligned_cols=89 Identities=21% Similarity=0.327 Sum_probs=78.0
Q ss_pred eEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC---CCC
Q psy6910 436 RIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSI---SPG 512 (1145)
Q Consensus 436 ~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~---~~g 512 (1145)
...|.|.|...||||+|.||.+.....++|.+|.++|||+++|+|++||+|++|||+++.+++|++|+++|+.. ..+
T Consensus 7 ~~~v~l~k~~~glG~~i~gg~~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~ 86 (103)
T 1ufx_A 7 GTLVRVKKSAATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKDR 86 (103)
T ss_dssp SEEEEEECCSSSCCEEEECBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCSSC
T ss_pred eEEEEEEcCCCcCCeEEECCCCCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccCCC
Confidence 36788899999999999999886333359999999999999999999999999999999999999999999984 136
Q ss_pred CeEEEEEEeCCC
Q psy6910 513 ETVQLEVCRGYP 524 (1145)
Q Consensus 513 ~~v~l~v~R~~~ 524 (1145)
+.++|+|.|...
T Consensus 87 ~~i~l~v~r~~~ 98 (103)
T 1ufx_A 87 DYIDFLVTEFNS 98 (103)
T ss_dssp SEEEEEECCCCC
T ss_pred CeEEEEEEEccc
Confidence 789999988743
No 64
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.39 E-value=1.5e-12 Score=120.05 Aligned_cols=86 Identities=29% Similarity=0.533 Sum_probs=77.9
Q ss_pred ceEEEEEEecccceeEEEecCCCCC----CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Q psy6910 435 ERIHSSLVKSLRGLGFTIVGGDDSK----EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSIS 510 (1145)
Q Consensus 435 ~~~~v~l~k~~~glG~~i~gg~~~~----~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~ 510 (1145)
++++|.|.|+..||||+|.||.+.+ ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++.
T Consensus 3 ~~~~v~l~k~~~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-- 80 (94)
T 2fe5_A 3 TIMEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKN-- 80 (94)
T ss_dssp CEEEEEEECCTTCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHT--
T ss_pred EEEEEEEEECCCCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--
Confidence 5688999999999999999987642 4579999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEEEeC
Q psy6910 511 PGETVQLEVCRG 522 (1145)
Q Consensus 511 ~g~~v~l~v~R~ 522 (1145)
.+..|.|+|.|+
T Consensus 81 ~~~~v~l~v~R~ 92 (94)
T 2fe5_A 81 TSDMVYLKVAKP 92 (94)
T ss_dssp CCSEEEEEEECC
T ss_pred CCCeEEEEEEcC
Confidence 456999999885
No 65
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.38 E-value=1.3e-12 Score=121.34 Aligned_cols=87 Identities=31% Similarity=0.485 Sum_probs=79.6
Q ss_pred ceEEEEEEecccceeEEEecCCCCC---CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy6910 435 ERIHSSLVKSLRGLGFTIVGGDDSK---EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISP 511 (1145)
Q Consensus 435 ~~~~v~l~k~~~glG~~i~gg~~~~---~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~ 511 (1145)
+.++|.|.|+..||||+|.++.+.. ..+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++++|+. .
T Consensus 3 ~~~~v~l~k~~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~--~ 80 (97)
T 2jil_A 3 RTVEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ--C 80 (97)
T ss_dssp EEEEEEEECBTTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH--S
T ss_pred eEEEEEEEeCCCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--C
Confidence 4688999999999999999987642 4579999999999999999999999999999999999999999999998 6
Q ss_pred CCeEEEEEEeCC
Q psy6910 512 GETVQLEVCRGY 523 (1145)
Q Consensus 512 g~~v~l~v~R~~ 523 (1145)
|..+.|+|.|+.
T Consensus 81 g~~v~l~v~R~~ 92 (97)
T 2jil_A 81 GQEAALLIEYDV 92 (97)
T ss_dssp CSEEEEEEEEEC
T ss_pred CCeEEEEEEeCC
Confidence 899999999973
No 66
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.38 E-value=1.1e-12 Score=134.21 Aligned_cols=88 Identities=30% Similarity=0.422 Sum_probs=79.1
Q ss_pred ccceEEEEEEecccceeEEEec---CCCC--CCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy6910 433 IGERIHSSLVKSLRGLGFTIVG---GDDS--KEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQ 507 (1145)
Q Consensus 433 ~g~~~~v~l~k~~~glG~~i~g---g~~~--~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~ 507 (1145)
..+.+.|.|.|+..||||+|.+ |.+. ...+++|.+|.++|||+++|+|++||+|++|||++|.+++|.+++.+|+
T Consensus 78 ~~~~~~v~l~k~~~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~ 157 (170)
T 3egg_C 78 RLELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLR 157 (170)
T ss_dssp TSEEEEEEEECBTTBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHH
T ss_pred CceEEEEEEEeCCCeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4567899999999999999999 4332 2457999999999999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEEEEeC
Q psy6910 508 SISPGETVQLEVCRG 522 (1145)
Q Consensus 508 ~~~~g~~v~l~v~R~ 522 (1145)
. .|..|+|+|.|+
T Consensus 158 ~--~g~~v~L~V~R~ 170 (170)
T 3egg_C 158 N--TKGRVRFMIGRE 170 (170)
T ss_dssp H--CCSEEEEEEEEC
T ss_pred c--CCCEEEEEEEeC
Confidence 9 578999999984
No 67
>2jxw_A WW domain-binding protein 4; WW domain containing protein, FBP21, WBP4, metal- binding, mRNA processing, mRNA splicing, nucleus, polymorphism; NMR {Homo sapiens}
Probab=99.37 E-value=9.6e-13 Score=115.30 Aligned_cols=70 Identities=23% Similarity=0.365 Sum_probs=60.6
Q ss_pred CCcEEEEccCCceEeeeCCCCceeccCCcchhcccccccCCCCCCCCCceeeeCCCCceEEEeCCCceeeCcCCc
Q psy6910 298 PRWEKAYTEKGEVYFIDHNSSTSSWLDPRLCKFQKKLEDCSDDELPYGWERIDDPAYGTYYIDHVNKQTQYENPV 372 (1145)
Q Consensus 298 ~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~~~~~~~~~~~~~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~ 372 (1145)
.+|+++.+++|++||+||.|+.|+|++|+..... .....+|.+|++..+++|++||+|+.|++++|+.|.
T Consensus 5 ~~W~e~~~~~G~~YYyN~~T~~s~We~P~~~~~~-----~e~~~~~~~W~~~~~~~Gr~YyyN~~T~~s~We~P~ 74 (75)
T 2jxw_A 5 GRWVEGITSEGYHYYYDLISGASQWEKPEGFQGD-----LKKTAVKTVWVEGLSEDGFTYYYNTETGESRWEKPD 74 (75)
T ss_dssp CCEEEEEETTTEEEEEETTTTEEECSCCSSCSSC-----CSSSSCCCSEEEEEETTTEEEEEETTTTEEESSCCC
T ss_pred CCcEEEECCCCCEEEEECCCCCEeecCCCccccc-----ccccCCCccEEEEECCCCCEEEEECcCCCEeccCcC
Confidence 5799999999999999999999999999743211 123468899999999999999999999999999995
No 68
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.37 E-value=1.8e-12 Score=123.73 Aligned_cols=87 Identities=23% Similarity=0.441 Sum_probs=79.3
Q ss_pred ccceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Q psy6910 433 IGERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPG 512 (1145)
Q Consensus 433 ~g~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g 512 (1145)
.++...|.|.|+..||||+|.+|.+. ..+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++.+++. .|
T Consensus 22 ~~~~~~v~l~~~~~glG~~l~~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~--~g 98 (112)
T 2r4h_A 22 SMDFYTVELERGAKGFGFSLRGGREY-NMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKN--GG 98 (112)
T ss_dssp -CCEEEEEEECBTTBTSEEEEECGGG-TCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHT--TT
T ss_pred CCceEEEEEEcCCCccCEEEeccccC-CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CC
Confidence 35678999999999999999998764 5679999999999999999999999999999999999999999999998 58
Q ss_pred CeEEEEEEeC
Q psy6910 513 ETVQLEVCRG 522 (1145)
Q Consensus 513 ~~v~l~v~R~ 522 (1145)
..|.|+|.|+
T Consensus 99 ~~v~l~v~R~ 108 (112)
T 2r4h_A 99 RRVRLFLKRG 108 (112)
T ss_dssp TEEEEEEECC
T ss_pred CeEEEEEEeC
Confidence 8999999886
No 69
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.37 E-value=2.5e-12 Score=119.35 Aligned_cols=87 Identities=24% Similarity=0.341 Sum_probs=78.7
Q ss_pred cceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCC
Q psy6910 434 GERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGE 513 (1145)
Q Consensus 434 g~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~ 513 (1145)
.+.+.|.|.+...||||+|.++.+. ..+++|..|.+++||+++|+|++||+|++|||+.+.++++.+++.+|+. .|.
T Consensus 4 ~~~~~v~l~~~~~~lG~~i~~~~~~-~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~--~g~ 80 (97)
T 1n7e_A 4 AIIYTVELKRYGGPLGITISGTEEP-FDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQM--AGE 80 (97)
T ss_dssp CCEEEEEEECTTSCCCEEEECCSST-TSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHT--CCS
T ss_pred ceEEEEEEEeCCCCcCEEEEcccCC-CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCC
Confidence 3568899988888899999998654 4679999999999999999999999999999999999999999999995 688
Q ss_pred eEEEEEEeCC
Q psy6910 514 TVQLEVCRGY 523 (1145)
Q Consensus 514 ~v~l~v~R~~ 523 (1145)
.|.|+|.|+.
T Consensus 81 ~v~l~v~R~~ 90 (97)
T 1n7e_A 81 TVTLKIKKQT 90 (97)
T ss_dssp EEEEEEECCC
T ss_pred eEEEEEEeCC
Confidence 9999999863
No 70
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.36 E-value=2.3e-12 Score=121.86 Aligned_cols=90 Identities=28% Similarity=0.412 Sum_probs=80.3
Q ss_pred ccceEEEEEEecccceeEEEec---CCCC--CCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy6910 433 IGERIHSSLVKSLRGLGFTIVG---GDDS--KEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQ 507 (1145)
Q Consensus 433 ~g~~~~v~l~k~~~glG~~i~g---g~~~--~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~ 507 (1145)
..+.+.|.|.|...||||+|.+ |.+. ...+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++.+++
T Consensus 7 ~~~~~~v~l~k~~~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 86 (107)
T 1wf8_A 7 GLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLR 86 (107)
T ss_dssp CEEEEEEEEECBTTBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHH
T ss_pred CceEEEEEEEECCCcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 3467889999999999999999 5543 2457999999999999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEEEEeCCC
Q psy6910 508 SISPGETVQLEVCRGYP 524 (1145)
Q Consensus 508 ~~~~g~~v~l~v~R~~~ 524 (1145)
. .|..|.|+|.|..+
T Consensus 87 ~--~~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 87 N--TKGNVRFVIGREKP 101 (107)
T ss_dssp H--CCSEEEEEEEEECC
T ss_pred c--CCCeEEEEEEeCCC
Confidence 8 58899999999743
No 71
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.36 E-value=1.1e-12 Score=126.03 Aligned_cols=88 Identities=32% Similarity=0.512 Sum_probs=78.7
Q ss_pred ccceEEEEEEecccceeEEEecCCCCC--CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Q psy6910 433 IGERIHSSLVKSLRGLGFTIVGGDDSK--EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSIS 510 (1145)
Q Consensus 433 ~g~~~~v~l~k~~~glG~~i~gg~~~~--~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~ 510 (1145)
..+...|.|.|+..||||+|.+|.+.. ..+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++.+|+.
T Consensus 23 ~~~~~~v~L~k~~~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~-- 100 (117)
T 2fne_A 23 MPQCKSITLERGPDGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKR-- 100 (117)
T ss_dssp CCEEEEEEECCBTTBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHH--
T ss_pred CCccEEEEEEeCCCcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--
Confidence 345678999999999999999986532 3479999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEEEeC
Q psy6910 511 PGETVQLEVCRG 522 (1145)
Q Consensus 511 ~g~~v~l~v~R~ 522 (1145)
.+..|+|+|.|+
T Consensus 101 ~~~~v~l~v~R~ 112 (117)
T 2fne_A 101 TKGTVTLMVLSS 112 (117)
T ss_dssp CCSSEEEEEEEC
T ss_pred CCCeEEEEEEeC
Confidence 456799999986
No 72
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.35 E-value=1.5e-12 Score=123.32 Aligned_cols=88 Identities=27% Similarity=0.409 Sum_probs=77.2
Q ss_pred ceEEEEEEec-ccceeEEEecCCCC-CCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC--C
Q psy6910 435 ERIHSSLVKS-LRGLGFTIVGGDDS-KEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSI--S 510 (1145)
Q Consensus 435 ~~~~v~l~k~-~~glG~~i~gg~~~-~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~--~ 510 (1145)
+.++|.|.|. ..||||+|.++.+. ...+++|.+|.++|||+++|+|++||+|++|||+++.+++|++++++|+.. +
T Consensus 5 ~~~~v~l~k~~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 84 (108)
T 3cbz_A 5 NIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHK 84 (108)
T ss_dssp CEEEEEECHHHHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTS
T ss_pred eEEEEEEEeCCCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccC
Confidence 5678999985 57999999998653 256899999999999999999999999999999999999999999999985 3
Q ss_pred CCCeEEEEEEeCC
Q psy6910 511 PGETVQLEVCRGY 523 (1145)
Q Consensus 511 ~g~~v~l~v~R~~ 523 (1145)
+..|+|+|.|..
T Consensus 85 -~~~v~l~v~R~~ 96 (108)
T 3cbz_A 85 -PGPIVLTVAKSG 96 (108)
T ss_dssp -SSCEEEEEECCC
T ss_pred -CCeEEEEEEeCC
Confidence 346999999863
No 73
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.35 E-value=1.3e-12 Score=125.98 Aligned_cols=96 Identities=25% Similarity=0.375 Sum_probs=78.3
Q ss_pred CCcCccceE-EEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy6910 429 PDELIGERI-HSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQ 507 (1145)
Q Consensus 429 p~~~~g~~~-~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~ 507 (1145)
+.++.++.+ .+.+.+. .||||+|.||.+.....++|.+|.++|||+++|.|++||+|++|||+++.+++|++++++|+
T Consensus 11 ~~~~~~~~~~~~~~~~~-~glG~~i~gg~~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~ 89 (118)
T 1v6b_A 11 PEQIAGKDVRLLRIKKE-GSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQ 89 (118)
T ss_dssp HHHHSSCCEEEEEEESC-SCCCCEEEEBTTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHH
T ss_pred ccccCCceEEEEEECCC-CccCEEEEcccCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 333444333 4455554 59999999998765566999999999999999669999999999999999999999999998
Q ss_pred cCC--CCCeEEEEEEeCCCC
Q psy6910 508 SIS--PGETVQLEVCRGYPL 525 (1145)
Q Consensus 508 ~~~--~g~~v~l~v~R~~~~ 525 (1145)
... .|..|+|+|.|..+.
T Consensus 90 ~~~~~~g~~v~l~v~r~~~~ 109 (118)
T 1v6b_A 90 KAWNQGGDWIDLVVAVCPPK 109 (118)
T ss_dssp HHHHHTCSEEEEEEECCCSC
T ss_pred HhhhcCCCeEEEEEEeCCcc
Confidence 752 288999999997443
No 74
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.35 E-value=2.9e-12 Score=123.26 Aligned_cols=90 Identities=22% Similarity=0.279 Sum_probs=79.0
Q ss_pred ccceEEEEEEecc-------cceeEEEecCCCCC----CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHH
Q psy6910 433 IGERIHSSLVKSL-------RGLGFTIVGGDDSK----EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHD 501 (1145)
Q Consensus 433 ~g~~~~v~l~k~~-------~glG~~i~gg~~~~----~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~ 501 (1145)
.-....|.|.+.. .||||+|.|+.+.+ ..+++|.+|.++|||+++|+|++||+|++|||+++.+++|.+
T Consensus 10 ~~~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~ 89 (117)
T 1ujd_A 10 IFPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEE 89 (117)
T ss_dssp SSCEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHH
T ss_pred CCceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHH
Confidence 3345678888877 79999999987642 347999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCeEEEEEEeCCC
Q psy6910 502 MVSVFQSISPGETVQLEVCRGYP 524 (1145)
Q Consensus 502 ~~~~l~~~~~g~~v~l~v~R~~~ 524 (1145)
++.+|+. .+..|.|+|.|+..
T Consensus 90 ~~~~l~~--~~~~v~l~v~R~~~ 110 (117)
T 1ujd_A 90 VQSIISQ--QSGEAEICVRLDLN 110 (117)
T ss_dssp HHHHHSC--CSSCEEEEEESSCC
T ss_pred HHHHHhc--CCCEEEEEEEECCc
Confidence 9999999 67899999999743
No 75
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.35 E-value=1.1e-12 Score=126.71 Aligned_cols=89 Identities=25% Similarity=0.353 Sum_probs=74.9
Q ss_pred ccceEEEEEEeccc-ceeEEEecCCCCC--CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Q psy6910 433 IGERIHSSLVKSLR-GLGFTIVGGDDSK--EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSI 509 (1145)
Q Consensus 433 ~g~~~~v~l~k~~~-glG~~i~gg~~~~--~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~ 509 (1145)
..+...|.|.|+.. ||||+|.+|.+.. ..+++|.+|.++|||+++|.|++||+|++|||+++.++++.+++.+|+.
T Consensus 22 ~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~- 100 (120)
T 2iwo_A 22 SMGLRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKN- 100 (120)
T ss_dssp ---CEEEEEEC----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHH-
T ss_pred CCCcEEEEEEcCCCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-
Confidence 44568899999875 9999999986632 3479999999999999996699999999999999999999999999999
Q ss_pred CCCCeEEEEEEeCC
Q psy6910 510 SPGETVQLEVCRGY 523 (1145)
Q Consensus 510 ~~g~~v~l~v~R~~ 523 (1145)
.+..|+|+|.|+.
T Consensus 101 -~~~~v~l~v~r~g 113 (120)
T 2iwo_A 101 -ASGSIEMQVVAGG 113 (120)
T ss_dssp -CCSEEEEEEECCT
T ss_pred -CCCeEEEEEEECC
Confidence 5778999999873
No 76
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.35 E-value=1e-12 Score=127.29 Aligned_cols=87 Identities=34% Similarity=0.639 Sum_probs=80.5
Q ss_pred ccceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Q psy6910 433 IGERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPG 512 (1145)
Q Consensus 433 ~g~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g 512 (1145)
.++.+.+.|.|+..||||++.+. ..+++|.+|.++|||+++|+|++||+|++|||.++.+.++.+++++|+..+.|
T Consensus 25 ~~~~~~~~l~k~~~glG~~i~~~----~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G 100 (126)
T 1wif_A 25 LNKVIQTKLTVGNLGLGLVVIQN----GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIG 100 (126)
T ss_dssp CCCEEEEEEECCTTCCCCCEEEE----TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSS
T ss_pred CCceEEEEEecCCceEeEEEEcC----CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Confidence 45688999999999999999885 34699999999999999999999999999999999999999999999998889
Q ss_pred CeEEEEEEeCC
Q psy6910 513 ETVQLEVCRGY 523 (1145)
Q Consensus 513 ~~v~l~v~R~~ 523 (1145)
..|.|+|.|++
T Consensus 101 ~~v~l~V~R~~ 111 (126)
T 1wif_A 101 TVLQIKAYRGF 111 (126)
T ss_dssp CEEEEEEESSS
T ss_pred CEEEEEEEECC
Confidence 99999999984
No 77
>3l4h_A E3 ubiquitin-protein ligase HECW1; E3 ligase, WW domain, UBL-conjugation pathway, structural GE structural genomics consortium, SGC, coiled coil; HET: MSE; 1.80A {Homo sapiens}
Probab=99.35 E-value=6.3e-14 Score=128.25 Aligned_cols=62 Identities=24% Similarity=0.460 Sum_probs=56.3
Q ss_pred CCCCcEEEEccCCceEeeeCCCCceeccCCcchhcccccccCCCCCCCCCceeeeCCCCceEEEeCCCceeeCcCCcccc
Q psy6910 296 LPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRLCKFQKKLEDCSDDELPYGWERIDDPAYGTYYIDHVNKQTQYENPVLQA 375 (1145)
Q Consensus 296 LP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~~~~~~~~~~~~~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~~ 375 (1145)
.|.|||++.++.|++|||||++. + ..+||+|||.+.++.|++|||||+|++|+|+||++..
T Consensus 46 ~p~~we~~~~~~~lV~~vn~~~d------~-------------~~pLP~GWE~r~d~~Gr~YfIdH~tktTtW~dPRl~~ 106 (109)
T 3l4h_A 46 DARNFERYQHNRDLVNFINMFAD------T-------------RLELPRGWEIKTDQQGKSFFVDHNSRATTFIDPRIPL 106 (109)
T ss_dssp CTHHHHHHTTCHHHHHHHHTTCC------T-------------TSCCCTTEEEEECTTCCEEEEETTTTEEESSCSCCSC
T ss_pred CCcChhhhcCcCCceEEeccCCC------C-------------CCCCCCCCeEEECCCCCEEEEeCCCCCEeeCCCCccc
Confidence 78999999999999999999973 2 3479999999999999999999999999999999864
Q ss_pred c
Q psy6910 376 K 376 (1145)
Q Consensus 376 ~ 376 (1145)
.
T Consensus 107 ~ 107 (109)
T 3l4h_A 107 Q 107 (109)
T ss_dssp C
T ss_pred c
Confidence 3
No 78
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.34 E-value=6.8e-12 Score=116.11 Aligned_cols=85 Identities=54% Similarity=0.894 Sum_probs=78.1
Q ss_pred CccEEEEEEecCCCCcceEEeccCCcceEEEeecccccCCCCCCCEEEEECCEecCCCCHHHHHHHHhcCCCCceEEEEE
Q psy6910 595 DSEYLTIPIVKGAMGFGFTIADSSHGQKVKKILDRQRCKNLAEGDILIEINNLNVRNMCHGEVVQVLKDCQRNLEANIIV 674 (1145)
Q Consensus 595 ~~~~~~v~l~k~~~glG~~i~~~~~g~~V~~i~~a~~~g~L~~GD~Il~INg~~v~~~s~~ea~~~Lk~~~~g~~v~L~v 674 (1145)
..+.++++|.|+..||||+|.+...|++|..|.+.+.+++|++||+|++|||+++.+++|++++++|+.++.+..|+|+|
T Consensus 8 ~~~~~~v~l~~~~~g~G~~i~~~~~Gv~V~~v~~~a~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v 87 (96)
T 1ujv_A 8 QAELMTLTIVKGAQGFGFTIADSPTGQRVKQILDIQGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLII 87 (96)
T ss_dssp CCCCEEEEEECCSSSSSEEEEEETTEEEEEEESCGGGSTTCCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEEEEE
T ss_pred CceEEEEEEEeCCCceeEEEEcCCCCEEEEEEecccccCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEE
Confidence 46788999999999999999887789999999986678999999999999999999999999999999987678999999
Q ss_pred EcCCC
Q psy6910 675 QRSRL 679 (1145)
Q Consensus 675 ~R~~~ 679 (1145)
.|.+.
T Consensus 88 ~R~g~ 92 (96)
T 1ujv_A 88 HRGSG 92 (96)
T ss_dssp ECCSS
T ss_pred EECCC
Confidence 99864
No 79
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.34 E-value=3.6e-12 Score=123.22 Aligned_cols=89 Identities=34% Similarity=0.544 Sum_probs=80.3
Q ss_pred cceEEEEEEecccceeEEEecCCCCC----CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Q psy6910 434 GERIHSSLVKSLRGLGFTIVGGDDSK----EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSI 509 (1145)
Q Consensus 434 g~~~~v~l~k~~~glG~~i~gg~~~~----~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~ 509 (1145)
.....|.|.|+..||||+|.+|.+.+ ..+++|.+|.++|||+++|+|++||+|++|||+++.+++|.+++.+++.
T Consensus 16 ~~~~~v~l~r~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~- 94 (120)
T 2eno_A 16 VTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRN- 94 (120)
T ss_dssp EEEEEEEEECCSSSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHH-
T ss_pred CceEEEEEEECCCCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-
Confidence 35678999999999999999987642 4689999999999999999999999999999999999999999999998
Q ss_pred CCCCeEEEEEEeCCC
Q psy6910 510 SPGETVQLEVCRGYP 524 (1145)
Q Consensus 510 ~~g~~v~l~v~R~~~ 524 (1145)
.|..|.|+|.|...
T Consensus 95 -~g~~v~l~v~R~~~ 108 (120)
T 2eno_A 95 -AGYAVSLRVQHRLQ 108 (120)
T ss_dssp -HCSEEEEEEEEEEE
T ss_pred -CCCeEEEEEEeCCc
Confidence 47899999998743
No 80
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.34 E-value=3.1e-12 Score=123.04 Aligned_cols=88 Identities=17% Similarity=0.273 Sum_probs=79.0
Q ss_pred ceEEEEEEecc-cceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCC
Q psy6910 435 ERIHSSLVKSL-RGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGE 513 (1145)
Q Consensus 435 ~~~~v~l~k~~-~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~ 513 (1145)
..+.|.|.|.. .+|||+|.++.+....+++|.+|.++|||+++|+|++||+|++|||+++.++++++++++|+. .|.
T Consensus 15 ~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~--~g~ 92 (117)
T 1v62_A 15 GPLMVEIVKTPGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLAS--ISE 92 (117)
T ss_dssp SSEEEEEECCTTCCCCCEEEEECCSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHS--CSS
T ss_pred CcEEEEEEcCCCCcccEEEEccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCC
Confidence 35789999986 799999999876534469999999999999999999999999999999999999999999997 689
Q ss_pred eEEEEEEeCCC
Q psy6910 514 TVQLEVCRGYP 524 (1145)
Q Consensus 514 ~v~l~v~R~~~ 524 (1145)
.|+|+|.|...
T Consensus 93 ~v~l~v~r~~~ 103 (117)
T 1v62_A 93 KVRLEILPVPQ 103 (117)
T ss_dssp EEEEEECCBTT
T ss_pred eEEEEEEECCC
Confidence 99999998743
No 81
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.34 E-value=2.8e-12 Score=117.27 Aligned_cols=86 Identities=27% Similarity=0.347 Sum_probs=76.8
Q ss_pred cceEEEEEEec-ccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Q psy6910 434 GERIHSSLVKS-LRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPG 512 (1145)
Q Consensus 434 g~~~~v~l~k~-~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g 512 (1145)
++..+|.|.|. ..||||++.+|.+. ..+++|.+|.++|||+++|.|++||+|++|||+++.++++.+++.+++. .|
T Consensus 3 ~~~~~v~l~k~~~~~lG~~i~~~~~~-~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~--~~ 79 (90)
T 1qav_A 3 LQRRRVTVRKADAGGLGISIKGGREN-KMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKK--TG 79 (90)
T ss_dssp SSCEEEEEECCTTTCCCEEEEEEGGG-TEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHT--CC
T ss_pred CccEEEEEEeCCCCCcCEEEEcccCC-CCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CC
Confidence 35678999995 57999999998765 5679999999999999995699999999999999999999999999998 57
Q ss_pred CeEEEEEEeC
Q psy6910 513 ETVQLEVCRG 522 (1145)
Q Consensus 513 ~~v~l~v~R~ 522 (1145)
..|.|+|.|-
T Consensus 80 ~~v~l~v~r~ 89 (90)
T 1qav_A 80 KEVVLEVKYM 89 (90)
T ss_dssp SEEEEEEEEC
T ss_pred CeEEEEEEEe
Confidence 8999999874
No 82
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.34 E-value=4.9e-12 Score=124.11 Aligned_cols=88 Identities=26% Similarity=0.289 Sum_probs=76.7
Q ss_pred eEEEEEEec----------ccceeEEEecCCCCC--CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHH
Q psy6910 436 RIHSSLVKS----------LRGLGFTIVGGDDSK--EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMV 503 (1145)
Q Consensus 436 ~~~v~l~k~----------~~glG~~i~gg~~~~--~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~ 503 (1145)
..++.|.|. ..+|||+|.||.+.. ..+++|.+|.++|||+++|+|++||+|++|||+++.+++|.+++
T Consensus 28 i~~v~l~~~~~~~~i~k~~~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~ 107 (131)
T 1wfg_A 28 IGRILLNKRLKDGSVPRDSGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVY 107 (131)
T ss_dssp EEEEEEECSCTTSCCCSCSCTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHH
T ss_pred eeEEEEeccceeEEEecCCCCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 345666655 568999999986652 34799999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCeEEEEEEeCC
Q psy6910 504 SVFQSISPGETVQLEVCRGY 523 (1145)
Q Consensus 504 ~~l~~~~~g~~v~l~v~R~~ 523 (1145)
++|+....|..|.|+|.|..
T Consensus 108 ~~l~~~~~g~~v~l~v~R~g 127 (131)
T 1wfg_A 108 NIILESKPEPQVELVVSRSG 127 (131)
T ss_dssp HHHHHTSSSSEEEEEEEEEC
T ss_pred HHHHhcCCCCEEEEEEEcCC
Confidence 99999766789999999974
No 83
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.34 E-value=3.7e-12 Score=120.26 Aligned_cols=88 Identities=28% Similarity=0.467 Sum_probs=78.0
Q ss_pred ccceEEEEEEecccceeEEEecCCCC--CCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Q psy6910 433 IGERIHSSLVKSLRGLGFTIVGGDDS--KEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSIS 510 (1145)
Q Consensus 433 ~g~~~~v~l~k~~~glG~~i~gg~~~--~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~ 510 (1145)
..+.+.|.| |...||||+|.+|.+. ...+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++.+++.
T Consensus 9 ~~~~~~v~l-~~~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~-- 85 (106)
T 3axa_A 9 EPEIITVTL-KKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTR-- 85 (106)
T ss_dssp -CCEEEEEE-ECSSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT--
T ss_pred CceEEEEEE-CCCCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--
Confidence 345788888 8889999999987543 24579999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEEEeCC
Q psy6910 511 PGETVQLEVCRGY 523 (1145)
Q Consensus 511 ~g~~v~l~v~R~~ 523 (1145)
.|..|.|+|.|.-
T Consensus 86 ~g~~v~l~v~R~~ 98 (106)
T 3axa_A 86 TSSVVTLEVAKQG 98 (106)
T ss_dssp CCSEEEEEEECCC
T ss_pred CCCeEEEEEEeCC
Confidence 6889999999863
No 84
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.34 E-value=2e-12 Score=122.54 Aligned_cols=89 Identities=28% Similarity=0.513 Sum_probs=81.6
Q ss_pred ccceEEEEEEecccceeEEEe-----cCCCCC--CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHH
Q psy6910 433 IGERIHSSLVKSLRGLGFTIV-----GGDDSK--EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSV 505 (1145)
Q Consensus 433 ~g~~~~v~l~k~~~glG~~i~-----gg~~~~--~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~ 505 (1145)
.++.++|.|.|+..||||+|. ||.+.. ..+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++.+
T Consensus 7 ~~~~~~v~l~k~~~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 86 (108)
T 1q7x_A 7 PGDIFEVELAKNDNSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVET 86 (108)
T ss_dssp SSSEEEEEEESSSCSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHH
T ss_pred CCcEEEEEEEECCCCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 578899999999999999999 886642 4689999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCeEEEEEEeCC
Q psy6910 506 FQSISPGETVQLEVCRGY 523 (1145)
Q Consensus 506 l~~~~~g~~v~l~v~R~~ 523 (1145)
++. .|..|.|+|.|+.
T Consensus 87 ~~~--~g~~v~l~v~R~~ 102 (108)
T 1q7x_A 87 LRN--TGQVVHLLLEKGQ 102 (108)
T ss_dssp HHH--TTSEEEEEEECCC
T ss_pred HHc--CCCeEEEEEEeCC
Confidence 998 5899999999873
No 85
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.34 E-value=4e-12 Score=117.01 Aligned_cols=85 Identities=20% Similarity=0.262 Sum_probs=75.3
Q ss_pred ceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCe
Q psy6910 435 ERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGET 514 (1145)
Q Consensus 435 ~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~ 514 (1145)
....|.|.|...||||++.++ +. ..+++|.+|.++|||+++|+|++||+|++|||.++.+++|.+++++|++. +..
T Consensus 4 ~~r~v~l~k~~~~lG~~i~~~-~~-~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~ 79 (93)
T 3o46_A 4 SVKIIRLVKNREPLGATIKKD-EQ-TGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQS--QGA 79 (93)
T ss_dssp CCEEEEEEESSSCCCEEEEEC-TT-TCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHC--CEE
T ss_pred cEEEEEEEeCCCCccEEEEec-CC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--CCe
Confidence 456789999988999999987 22 45799999999999999999999999999999999999999999999994 459
Q ss_pred EEEEEEeCC
Q psy6910 515 VQLEVCRGY 523 (1145)
Q Consensus 515 v~l~v~R~~ 523 (1145)
|.|+|.|..
T Consensus 80 v~l~v~~~~ 88 (93)
T 3o46_A 80 ITFKIIPGS 88 (93)
T ss_dssp EEEEEECC-
T ss_pred EEEEEEeCC
Confidence 999998763
No 86
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.33 E-value=9.8e-12 Score=115.31 Aligned_cols=92 Identities=26% Similarity=0.368 Sum_probs=81.1
Q ss_pred CcccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCe
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDST 1109 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~ 1109 (1145)
....++|.+.+...+|||++.++.+. ..+++|..|.++++|+++|+|++||+|++|||.++.++++.+++++|+..+..
T Consensus 3 ~~~~~~v~l~~~~~~lG~~i~~~~~~-~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~ 81 (97)
T 1n7e_A 3 GAIIYTVELKRYGGPLGITISGTEEP-FDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGET 81 (97)
T ss_dssp CCCEEEEEEECTTSCCCEEEECCSST-TSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSE
T ss_pred CceEEEEEEEeCCCCcCEEEEcccCC-CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 34578899988877899999887543 46899999999999999999999999999999999999999999999977788
Q ss_pred EEEEEEeCCCcCC
Q psy6910 1110 VRLLIKRGGSVVA 1122 (1145)
Q Consensus 1110 v~L~v~R~~~~~~ 1122 (1145)
+.|+|.|++...+
T Consensus 82 v~l~v~R~~~~~~ 94 (97)
T 1n7e_A 82 VTLKIKKQTDAQP 94 (97)
T ss_dssp EEEEEECCCCCCC
T ss_pred EEEEEEeCCCCCC
Confidence 9999999886544
No 87
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.33 E-value=3.4e-12 Score=119.85 Aligned_cols=92 Identities=29% Similarity=0.468 Sum_probs=81.8
Q ss_pred CcccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcC--C
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNG--D 1107 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~--~ 1107 (1145)
..+.+.+.|.+...+|||.+.++.+. ..+++|..|.++|+|+++|+|++||+|++|||+++.++++++++++|+.. +
T Consensus 7 ~~~~~~v~l~~~~~g~G~~i~~g~~~-~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g 85 (103)
T 1uep_A 7 GYKELDVHLRRMESGFGFRILGGDEP-GQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARN 85 (103)
T ss_dssp SEEEECCEEESSSSSCCEEECCCCST-TSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHH
T ss_pred CceEEEEEEEeCCCccCEEEeeecCC-CCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 45667888999888999999987654 57899999999999999999999999999999999999999999999986 6
Q ss_pred CeEEEEEEeCCCcCC
Q psy6910 1108 STVRLLIKRGGSVVA 1122 (1145)
Q Consensus 1108 ~~v~L~v~R~~~~~~ 1122 (1145)
..|.|+|.|+....|
T Consensus 86 ~~v~l~v~R~~~~~p 100 (103)
T 1uep_A 86 GQVNLTVRRKVLSGP 100 (103)
T ss_dssp TEEEEEEEEECCCCC
T ss_pred CcEEEEEEeCCCCCC
Confidence 889999999876443
No 88
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.33 E-value=4.6e-12 Score=115.24 Aligned_cols=84 Identities=24% Similarity=0.324 Sum_probs=75.8
Q ss_pred ceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCe
Q psy6910 435 ERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGET 514 (1145)
Q Consensus 435 ~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~ 514 (1145)
..+.|.| ++..+|||++.+|.+. ..+++|.+|.++|||+++| |++||+|++|||.++.++++.+++.+++. .|..
T Consensus 3 ~~~~v~l-~~~~~~G~~l~~g~~~-~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~--~g~~ 77 (88)
T 2uzc_A 3 SNYSVSL-VGPAPWGFRLQGGKDF-NMPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIKG--CTGS 77 (88)
T ss_dssp CEEEEEE-ESSSCCCEEEEEEGGG-TEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHT--CCSE
T ss_pred cEEEEEE-cCCCcccEEEECcCCC-CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCe
Confidence 3577888 6778999999998776 5679999999999999999 99999999999999999999999999998 4889
Q ss_pred EEEEEEeCC
Q psy6910 515 VQLEVCRGY 523 (1145)
Q Consensus 515 v~l~v~R~~ 523 (1145)
|.|+|.|+-
T Consensus 78 v~l~v~R~g 86 (88)
T 2uzc_A 78 LNMTLQRES 86 (88)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEeCC
Confidence 999999863
No 89
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.33 E-value=3.6e-12 Score=124.70 Aligned_cols=89 Identities=19% Similarity=0.273 Sum_probs=80.3
Q ss_pred ccceEEEEEEecc-cceeEEEecCCCCC--CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcC-CCCHHHHHHHHhc
Q psy6910 433 IGERIHSSLVKSL-RGLGFTIVGGDDSK--EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVL-GYTHHDMVSVFQS 508 (1145)
Q Consensus 433 ~g~~~~v~l~k~~-~glG~~i~gg~~~~--~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~-~~~~~~~~~~l~~ 508 (1145)
.++...|.|.|+. .||||+|.+|.+.. ..+++|.+|.++|||+++|+|++||+|++|||+++. ++++.+++.+|+.
T Consensus 23 ~~~~~~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~ 102 (128)
T 2db5_A 23 GRQIEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQ 102 (128)
T ss_dssp TCEEEEEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHH
T ss_pred cCceEEEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc
Confidence 5678899999986 69999999987652 347999999999999999999999999999999998 9999999999998
Q ss_pred CCCCCeEEEEEEeCC
Q psy6910 509 ISPGETVQLEVCRGY 523 (1145)
Q Consensus 509 ~~~g~~v~l~v~R~~ 523 (1145)
.|..|.|+|.|+.
T Consensus 103 --~~~~v~l~v~r~~ 115 (128)
T 2db5_A 103 --TTGSLRLIVAREP 115 (128)
T ss_dssp --CCSEEEEEEEECC
T ss_pred --CCCeEEEEEEcCC
Confidence 6789999999973
No 90
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=99.33 E-value=1.9e-11 Score=144.60 Aligned_cols=145 Identities=21% Similarity=0.274 Sum_probs=111.5
Q ss_pred CCceEEEEeCCCChhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhccCCCeEEEEEeeccCCCCcccccCCCCCeE
Q psy6910 843 GSQVSIGHIVPGGAADLDGRLCTGDEIVSVDNLSVLNSSHHHVVELMGKASVYGRVTLGIRRKVMPPAETTSMMLGYPYD 922 (1145)
Q Consensus 843 ~~~i~V~~V~pgs~A~~~G~L~~GD~IlsVNG~~v~~~s~~~~~~~L~~~~~~~~v~L~v~r~~~~~~~~~~~~~~~~~~ 922 (1145)
..+++|..|.++|||+++| |+.||+|++|||.++. ++.++...+.....+..+.|+|.|.+... .+.
T Consensus 262 ~~G~~V~~V~~~spA~~aG-L~~GD~I~~vnG~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~~~----------~~~ 328 (436)
T 4a8c_A 262 QRGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLN--SFAELRSRIATTEPGTKVKLGLLRNGKPL----------EVE 328 (436)
T ss_pred CcceEEEEECCCChHHHCC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECCEEE----------EEE
Confidence 4578999999999999999 9999999999999999 56777777776555678999999976441 122
Q ss_pred EEEeccC-------CCcccEEEeecC------CCCCceEEEeCCCCcccccCCCCCCCEEEEECCeeecccCHHHHHHHH
Q psy6910 923 VTITRRE-------NEGFGFVIISSL------NKAGSTIGRIIEDSPADRSGELHLGDHILAVNHVDIMSLHHGEIVNLI 989 (1145)
Q Consensus 923 V~l~r~~-------~~~lG~~l~~~~------~~~g~~I~~v~~gs~A~~~G~L~~GD~Il~VNG~~v~~~~~~~~~~~l 989 (1145)
+.+.... ...+|+...... ...+++|..|.++|+|+++| |++||+|++|||+++.+ ..++..++
T Consensus 329 v~l~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~--~~~~~~~l 405 (436)
T 4a8c_A 329 VTLDTSTSSSASAEMITPALEGATLSDGQLKDGGKGIKIDEVVKGSPAAQAG-LQKDDVIIGVNRDRVNS--IAEMRKVL 405 (436)
T ss_pred EEECCCCcccccccccccCceeeecccccccCCCCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHH
Confidence 3322211 112444433221 11478999999999999999 99999999999999965 57888888
Q ss_pred HcCCCEEEEEEeCC
Q psy6910 990 KDSGYCVTLTIGAP 1003 (1145)
Q Consensus 990 ~~~~~~v~L~v~r~ 1003 (1145)
+..++.+.|+|.|.
T Consensus 406 ~~~~~~v~l~v~R~ 419 (436)
T 4a8c_A 406 AAKPAIIALQIVRG 419 (436)
T ss_pred HhCCCeEEEEEEEC
Confidence 88777899999774
No 91
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.33 E-value=5e-12 Score=116.01 Aligned_cols=84 Identities=30% Similarity=0.433 Sum_probs=76.5
Q ss_pred ceEEEEEEec-ccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCC
Q psy6910 435 ERIHSSLVKS-LRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGE 513 (1145)
Q Consensus 435 ~~~~v~l~k~-~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~ 513 (1145)
+.++|.|.|. ..||||++.++.+ ..+++|.+|.++|||+++|+|++||+|++|||+++.++++.++..+++. .|.
T Consensus 4 ~~~~v~l~k~~~~~lG~~~~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~ 79 (92)
T 2qg1_A 4 DTLTIGLQKKPGKGLGLSIVGKRN--DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKC--SLG 79 (92)
T ss_dssp CEEEEEEECCTTSCCSEEEECCSS--SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHH--CCS
T ss_pred eEEEEEEEeCCCCcccEEEEeccC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCC
Confidence 5789999996 4799999998754 3579999999999999999999999999999999999999999999998 578
Q ss_pred eEEEEEEeC
Q psy6910 514 TVQLEVCRG 522 (1145)
Q Consensus 514 ~v~l~v~R~ 522 (1145)
.|.|+|.|.
T Consensus 80 ~v~l~v~R~ 88 (92)
T 2qg1_A 80 TVTLEVGRI 88 (92)
T ss_dssp EEEEEEECC
T ss_pred eEEEEEEcc
Confidence 999999986
No 92
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.32 E-value=7.7e-12 Score=119.10 Aligned_cols=91 Identities=33% Similarity=0.520 Sum_probs=81.7
Q ss_pred ccceEEEEEEecccceeEEEecCCCCC--CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Q psy6910 433 IGERIHSSLVKSLRGLGFTIVGGDDSK--EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSIS 510 (1145)
Q Consensus 433 ~g~~~~v~l~k~~~glG~~i~gg~~~~--~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~ 510 (1145)
.++.+.+.+.++..||||+|.++.+.. ..+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++++|+..+
T Consensus 9 ~~~~~~~~l~~~~~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 88 (111)
T 2koj_A 9 VGKRLNIQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTK 88 (111)
T ss_dssp SCEEEEEEEECBTTBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCC
T ss_pred cCcEEEEEEEECCCccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 467789999999999999999976531 257999999999999999999999999999999999999999999999876
Q ss_pred CCCeEEEEEEeCC
Q psy6910 511 PGETVQLEVCRGY 523 (1145)
Q Consensus 511 ~g~~v~l~v~R~~ 523 (1145)
.|..|.|+|.|+-
T Consensus 89 ~g~~v~l~v~R~~ 101 (111)
T 2koj_A 89 MEGTVSLLVFRQE 101 (111)
T ss_dssp CSSEEEEEEEECC
T ss_pred CCCeEEEEEEeCC
Confidence 6899999999873
No 93
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.32 E-value=3.8e-12 Score=120.15 Aligned_cols=83 Identities=29% Similarity=0.544 Sum_probs=70.5
Q ss_pred EEEEEecccceeEEEecCCCCC----CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCC
Q psy6910 438 HSSLVKSLRGLGFTIVGGDDSK----EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGE 513 (1145)
Q Consensus 438 ~v~l~k~~~glG~~i~gg~~~~----~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~ 513 (1145)
...+..+..+|||+|.||.+.. ..+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++.+++. .|.
T Consensus 5 ~~~~~~~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~--~~~ 82 (106)
T 4amh_A 5 HHLVPRGSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKN--TSD 82 (106)
T ss_dssp -------CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHS--CCS
T ss_pred cccCCCCCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhC--CCC
Confidence 3445567789999999998763 3479999999999999999999999999999999999999999999998 577
Q ss_pred eEEEEEEeC
Q psy6910 514 TVQLEVCRG 522 (1145)
Q Consensus 514 ~v~l~v~R~ 522 (1145)
.|.|+|.|.
T Consensus 83 ~v~l~v~R~ 91 (106)
T 4amh_A 83 FVYLKVAKP 91 (106)
T ss_dssp EEEEEEECC
T ss_pred eEEEEEEeC
Confidence 999999986
No 94
>2dwv_A Salvador homolog 1 protein; WW domain, dimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.32 E-value=9.5e-13 Score=104.17 Aligned_cols=46 Identities=41% Similarity=0.829 Sum_probs=42.0
Q ss_pred CceeccCCcchhcccccccCCCCCCCCCceeeeCCCCceEEEeCCCceeeCcCCccc
Q psy6910 318 STSSWLDPRLCKFQKKLEDCSDDELPYGWERIDDPAYGTYYIDHVNKQTQYENPVLQ 374 (1145)
Q Consensus 318 ~tT~W~~Pr~~~~~~~~~~~~~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~ 374 (1145)
++|+|+||+. ..+||+|||++.|+.|++|||||.|++|||++|++.
T Consensus 1 ~tt~W~~P~~-----------~~~LP~GWe~~~d~~g~~YYvnh~t~~T~We~P~~~ 46 (49)
T 2dwv_A 1 GSSGSSGPLE-----------REGLPPGWERVESSEFGTYYVDHTNKRAQYRHPSGP 46 (49)
T ss_dssp CCSSSCCSCC-----------SSCCCTTEEEEEETTTEEEEEETTTTEEESSCCCCC
T ss_pred CeecCcCCCC-----------CCCCCcCcEEEECCCCCEEEEECCCCCEeccCcCCC
Confidence 5899999974 258999999999999999999999999999999875
No 95
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.32 E-value=2.9e-12 Score=117.84 Aligned_cols=85 Identities=34% Similarity=0.511 Sum_probs=76.9
Q ss_pred ceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCe
Q psy6910 435 ERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGET 514 (1145)
Q Consensus 435 ~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~ 514 (1145)
....|.|.|...||||+|.++.+. ..+++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++. .+..
T Consensus 5 ~~r~v~l~k~~~glG~~l~~~~~~-~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~ 81 (93)
T 2dkr_A 5 SSGVVELPKTDEGLGFNIMGGKEQ-NSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKA--AQGS 81 (93)
T ss_dssp CSCEEEEECCTTCCCEEEECSSSS-SCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHH--CCSE
T ss_pred CCEEEEEEeCCCCccEEEecccCC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCc
Confidence 446789999999999999998765 5689999999999999997799999999999999999999999999998 4568
Q ss_pred EEEEEEeC
Q psy6910 515 VQLEVCRG 522 (1145)
Q Consensus 515 v~l~v~R~ 522 (1145)
|.|+|.|+
T Consensus 82 v~l~v~r~ 89 (93)
T 2dkr_A 82 VKLVVRSG 89 (93)
T ss_dssp EEEEECCC
T ss_pred EEEEEEeC
Confidence 99999876
No 96
>2ysd_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=99.32 E-value=1.9e-12 Score=105.72 Aligned_cols=49 Identities=59% Similarity=1.039 Sum_probs=40.8
Q ss_pred ccCCCCCCCCcEEEEccCCceEeeeCCCCceeccCCcchhcccccccCCCCCCCCC
Q psy6910 290 ELDLGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRLCKFQKKLEDCSDDELPYG 345 (1145)
Q Consensus 290 ~~~~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~~~~~~~~~~~~~~~LP~g 345 (1145)
.+..++||+|||++++.+|++|||||+|++|+|+|||.... ...+||.|
T Consensus 9 ~~~~~~LP~GWe~~~~~~Gr~Yyinh~tk~TtWe~Pr~~~~-------~~~plp~g 57 (57)
T 2ysd_A 9 EDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNK-------QQSGPSSG 57 (57)
T ss_dssp CSCCCSCCSSEEEEECSSCCEEEEETTTTEEESSCTTTCSS-------CCCSCCCC
T ss_pred CCCCCCCCcCcEEEECCCCCEEEEECCCCcEecCCCCCccc-------cCCCCCCC
Confidence 45678999999999999999999999999999999986432 23477765
No 97
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.32 E-value=3.4e-12 Score=119.80 Aligned_cols=89 Identities=26% Similarity=0.398 Sum_probs=76.2
Q ss_pred ccceEEEEEEecc-cceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy6910 433 IGERIHSSLVKSL-RGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISP 511 (1145)
Q Consensus 433 ~g~~~~v~l~k~~-~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~ 511 (1145)
.+....|.|.|.. .||||+|.+|.+. ..+++|.+|.++|||++++.|++||+|++|||+++.++++.+++.+|+. .
T Consensus 7 ~~~~~~v~l~~~~~~~lG~~l~~g~~~-~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~--~ 83 (103)
T 2dc2_A 7 VGPIRKVLLLKEDHEGLGISITGGKEH-GVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQ--Q 83 (103)
T ss_dssp --CEEEEEEECCSSSCCCEEEEEEGGG-TEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHH--C
T ss_pred CCCcEEEEEEeCCCCccCEEEEeccCC-CCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHh--C
Confidence 3455778888865 7999999998765 5679999999999999975599999999999999999999999999999 4
Q ss_pred CCeEEEEEEeCCC
Q psy6910 512 GETVQLEVCRGYP 524 (1145)
Q Consensus 512 g~~v~l~v~R~~~ 524 (1145)
+..|+|+|.|.+.
T Consensus 84 ~~~v~l~v~~~~~ 96 (103)
T 2dc2_A 84 RGEIEFEVVYVAL 96 (103)
T ss_dssp CSEEEEEEEECC-
T ss_pred CCcEEEEEEecCC
Confidence 5699999998754
No 98
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.32 E-value=6.5e-12 Score=118.06 Aligned_cols=87 Identities=29% Similarity=0.458 Sum_probs=78.6
Q ss_pred CccceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy6910 432 LIGERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISP 511 (1145)
Q Consensus 432 ~~g~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~ 511 (1145)
+..+...|.|.|+..||||++.++.+. .+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++. .
T Consensus 8 ~~~~~~~v~l~k~~~glG~~~~~~~~~--~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~--~ 83 (104)
T 3i4w_A 8 IPREPRRIVIHRGSTGLGFNIVGGEXG--EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKN--A 83 (104)
T ss_dssp CCSSCEEEEEECBTTBTSEEEEECC-C--CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHT--S
T ss_pred CCCccEEEEEEeCCCccCEEEECCCCC--CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--C
Confidence 445678899999999999999998653 479999999999999999999999999999999999999999999998 6
Q ss_pred CCeEEEEEEeC
Q psy6910 512 GETVQLEVCRG 522 (1145)
Q Consensus 512 g~~v~l~v~R~ 522 (1145)
|..|.|+|.|.
T Consensus 84 ~~~v~l~v~r~ 94 (104)
T 3i4w_A 84 GQTVTIIAQYK 94 (104)
T ss_dssp CSEEEEEEEEC
T ss_pred CCeEEEEEEEC
Confidence 78999999886
No 99
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.32 E-value=6.2e-12 Score=120.90 Aligned_cols=90 Identities=32% Similarity=0.580 Sum_probs=80.5
Q ss_pred CcccEEEEeecCCcceeEEEEccCCc----ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHc
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREF----QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRN 1105 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~----~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~ 1105 (1145)
..+.+.|.+.++..+|||+|.++.+. ...+++|..|.++|+|+++|+|++||+|++|||.++.++++.+++.+|+.
T Consensus 22 ~~~~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 101 (117)
T 2byg_A 22 SMTVVEIKLFKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKN 101 (117)
T ss_dssp EEEEEEEEEECBTTBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred CCceEEEEEEeCCCCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 44677889988888999999987642 24589999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEEeCCC
Q psy6910 1106 GDSTVRLLIKRGGS 1119 (1145)
Q Consensus 1106 ~~~~v~L~v~R~~~ 1119 (1145)
.+..|.|+|.|++.
T Consensus 102 ~g~~v~l~v~R~~~ 115 (117)
T 2byg_A 102 TSEVVYLKVGKPTT 115 (117)
T ss_dssp CCSEEEEEEEEEEE
T ss_pred CCCeEEEEEEeCCc
Confidence 88899999999764
No 100
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.32 E-value=4.7e-12 Score=117.65 Aligned_cols=87 Identities=29% Similarity=0.423 Sum_probs=77.7
Q ss_pred cc-eEEEEEEe-cccceeEEEecCCCCC-----CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy6910 434 GE-RIHSSLVK-SLRGLGFTIVGGDDSK-----EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVF 506 (1145)
Q Consensus 434 g~-~~~v~l~k-~~~glG~~i~gg~~~~-----~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l 506 (1145)
|+ ...|.|.| ...||||+|.+|.+.. ..+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++.+|
T Consensus 3 ge~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l 82 (98)
T 1ihj_A 3 GELIHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLI 82 (98)
T ss_dssp CCEEEEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CceEEEEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 44 45689999 6789999999987642 24799999999999999999999999999999999999999999999
Q ss_pred hcCCCCCeEEEEEEeC
Q psy6910 507 QSISPGETVQLEVCRG 522 (1145)
Q Consensus 507 ~~~~~g~~v~l~v~R~ 522 (1145)
+. .|..|.|+|.|+
T Consensus 83 ~~--~g~~v~l~v~R~ 96 (98)
T 1ihj_A 83 KE--ADFKIELEIQTF 96 (98)
T ss_dssp HH--SCSEEEEEEEEC
T ss_pred hc--CCCeEEEEEEeC
Confidence 98 689999999986
No 101
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.31 E-value=3.6e-12 Score=115.65 Aligned_cols=85 Identities=27% Similarity=0.435 Sum_probs=75.1
Q ss_pred cceEEEEEEecc-cceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Q psy6910 434 GERIHSSLVKSL-RGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPG 512 (1145)
Q Consensus 434 g~~~~v~l~k~~-~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g 512 (1145)
|+...|.|.|.. .+|||++.+|.+. ..+++|.+|.++|||++++.|++||+|++|||+++.++++.+++.+|+. .+
T Consensus 1 g~~~~v~l~~~~~~~lG~~i~~~~~~-~~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~ 77 (87)
T 4e34_A 1 GPIRKVLLLKEDHEGLGISITGGKEH-GVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQ--QR 77 (87)
T ss_dssp CCCEEEEEECCTTBCCCEEEEEEGGG-TEEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHH--CC
T ss_pred CCEEEEEEEECCCCcccEEEEccCCC-CCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CC
Confidence 567889999975 5999999998765 5679999999999999954499999999999999999999999999998 57
Q ss_pred CeEEEEEEe
Q psy6910 513 ETVQLEVCR 521 (1145)
Q Consensus 513 ~~v~l~v~R 521 (1145)
..+.|+|.+
T Consensus 78 ~~v~l~v~~ 86 (87)
T 4e34_A 78 GEIEFEVVY 86 (87)
T ss_dssp SEEEEEEEE
T ss_pred CeEEEEEEE
Confidence 789998864
No 102
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.31 E-value=9e-12 Score=115.09 Aligned_cols=85 Identities=26% Similarity=0.300 Sum_probs=76.8
Q ss_pred ceEEEEEEecc--cceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Q psy6910 435 ERIHSSLVKSL--RGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPG 512 (1145)
Q Consensus 435 ~~~~v~l~k~~--~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g 512 (1145)
+.++|.|.|.. .||||+|.++.+. .+++|.+|.++|||+++|+|++||+|++|||.++.++++.+++.+++. .|
T Consensus 3 ~~~~v~l~k~~~~~~lG~~~~~~~~~--~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~--~g 78 (95)
T 2vwr_A 3 EILQVALHKRDSGEQLGIKLVRRTDE--PGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQA--SG 78 (95)
T ss_dssp EEEEEEEECSSTTCCCCEEEEECSSS--CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHH--CC
T ss_pred EEEEEEEEECCCCCcccEEEEeccCC--CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CC
Confidence 57899999953 5899999987653 579999999999999999999999999999999999999999999997 58
Q ss_pred CeEEEEEEeCC
Q psy6910 513 ETVQLEVCRGY 523 (1145)
Q Consensus 513 ~~v~l~v~R~~ 523 (1145)
..|.|+|.|.-
T Consensus 79 ~~v~l~v~R~~ 89 (95)
T 2vwr_A 79 ERVNLTIARPG 89 (95)
T ss_dssp SEEEEEEEEES
T ss_pred CEEEEEEEcCC
Confidence 89999999863
No 103
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.31 E-value=4.6e-12 Score=121.75 Aligned_cols=90 Identities=36% Similarity=0.627 Sum_probs=80.8
Q ss_pred CcccEEEEeecCCcceeEEEEccCCc--ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCC
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREF--QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGD 1107 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~--~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~ 1107 (1145)
..+++.|.|.|+..+|||++.++.+. ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|+..+
T Consensus 23 ~~~~~~v~L~k~~~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 102 (117)
T 2fne_A 23 MPQCKSITLERGPDGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTK 102 (117)
T ss_dssp CCEEEEEEECCBTTBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred CCccEEEEEEeCCCcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 35678999999989999999987542 1358999999999999999999999999999999999999999999999988
Q ss_pred CeEEEEEEeCCC
Q psy6910 1108 STVRLLIKRGGS 1119 (1145)
Q Consensus 1108 ~~v~L~v~R~~~ 1119 (1145)
+.|.|+|.|++.
T Consensus 103 ~~v~l~v~R~g~ 114 (117)
T 2fne_A 103 GTVTLMVLSSDE 114 (117)
T ss_dssp SSEEEEEEECSC
T ss_pred CeEEEEEEeCCc
Confidence 889999999875
No 104
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.31 E-value=1.2e-11 Score=113.02 Aligned_cols=87 Identities=25% Similarity=0.533 Sum_probs=78.8
Q ss_pred cccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeE
Q psy6910 1031 EQYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTV 1110 (1145)
Q Consensus 1031 ~~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v 1110 (1145)
...+.|.|.++..+|||++.++.+ ..+++|..|.++|+|+++| |++||+|++|||.++.+++++++.++|+..+..+
T Consensus 3 ~~~r~v~l~k~~~g~G~~~~~~~~--~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v 79 (90)
T 2he4_A 3 LRPRLCHLRKGPQGYGFNLHSDKS--RPGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEA 79 (90)
T ss_dssp TCCEEEEEECBTTBCCEEEEECSS--SSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSSSEE
T ss_pred CCcEEEEEEECCCCccEEEEccCC--CCCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcE
Confidence 456889999998999999988654 3589999999999999999 9999999999999999999999999999988889
Q ss_pred EEEEEeCCCc
Q psy6910 1111 RLLIKRGGSV 1120 (1145)
Q Consensus 1111 ~L~v~R~~~~ 1120 (1145)
.|+|.|.+..
T Consensus 80 ~l~v~r~~~~ 89 (90)
T 2he4_A 80 RLLVVGPSTR 89 (90)
T ss_dssp EEEEECCCCC
T ss_pred EEEEEccCCC
Confidence 9999997753
No 105
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.31 E-value=1.1e-11 Score=116.12 Aligned_cols=92 Identities=33% Similarity=0.637 Sum_probs=81.8
Q ss_pred cccEEEEeecCCcceeEEEEccCCc----ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcC
Q psy6910 1031 EQYHAIELSRGTRGFGFSIRGGREF----QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNG 1106 (1145)
Q Consensus 1031 ~~~~~v~l~k~~~~lG~sl~gg~~~----~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~ 1106 (1145)
.+.+.|.|.++..+|||++.++.+. ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..
T Consensus 3 ~~~~~v~l~k~~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 82 (102)
T 2i1n_A 3 FKYEEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEA 82 (102)
T ss_dssp EEEEEEEEECBTTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHS
T ss_pred ceEEEEEEEECCCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3567899999888999999987652 246899999999999999999999999999999999999999999999998
Q ss_pred CCeEEEEEEeCCCcCC
Q psy6910 1107 DSTVRLLIKRGGSVVA 1122 (1145)
Q Consensus 1107 ~~~v~L~v~R~~~~~~ 1122 (1145)
+..+.|+|.|++....
T Consensus 83 g~~v~l~v~R~~~~~~ 98 (102)
T 2i1n_A 83 GPVVRLVVRRRQPPPE 98 (102)
T ss_dssp CSEEEEEEEEECCCCS
T ss_pred CCeEEEEEEeCCCCCC
Confidence 8899999999886543
No 106
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.31 E-value=1.4e-11 Score=117.02 Aligned_cols=92 Identities=34% Similarity=0.587 Sum_probs=83.5
Q ss_pred CCCcCccceEEEEEEecccceeEEEecCCCC-----CCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHH
Q psy6910 428 NPDELIGERIHSSLVKSLRGLGFTIVGGDDS-----KEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDM 502 (1145)
Q Consensus 428 ~p~~~~g~~~~v~l~k~~~glG~~i~gg~~~-----~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~ 502 (1145)
.|.....+.+.+.+.+...||||+|.+|.+. ...+++|..|.+++||+++| |++||+|++|||+.+.++++.++
T Consensus 8 ~~~~~~~~~~~~~l~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~ 86 (110)
T 1x5q_A 8 EPARIEEEELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEA 86 (110)
T ss_dssp CCCCCCCEEEEEEEECSSSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred CcccCCcceEEEEEecCCCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHH
Confidence 4566778889999999999999999998763 24689999999999999999 99999999999999999999999
Q ss_pred HHHHhcCCCCCeEEEEEEeC
Q psy6910 503 VSVFQSISPGETVQLEVCRG 522 (1145)
Q Consensus 503 ~~~l~~~~~g~~v~l~v~R~ 522 (1145)
+.+++. .|..|.|+|.|+
T Consensus 87 ~~~~~~--~g~~v~l~v~R~ 104 (110)
T 1x5q_A 87 VEALRG--AGTAVQMRVWRE 104 (110)
T ss_dssp HHHHHS--CCSEEEEEEEEC
T ss_pred HHHhhC--CCCeEEEEEEEC
Confidence 999998 689999999997
No 107
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.31 E-value=1e-11 Score=116.06 Aligned_cols=90 Identities=39% Similarity=0.672 Sum_probs=80.9
Q ss_pred CcccEEEEeecCCcceeEEEEccCCcc----cccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHc
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREFQ----NMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRN 1105 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~~----~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~ 1105 (1145)
....+.|.|.++..+|||++.++.+.. ..+++|..|.++|+|+++|+|++||+|++|||+++.++++.+++.+++.
T Consensus 5 ~~~~~~v~l~~~~~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 84 (101)
T 2jik_A 5 LVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRN 84 (101)
T ss_dssp GEEEEEEEEECCTTCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHT
T ss_pred CCccEEEEEEeCCCCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 356788999998899999999976531 4689999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEEEeCCC
Q psy6910 1106 GDSTVRLLIKRGGS 1119 (1145)
Q Consensus 1106 ~~~~v~L~v~R~~~ 1119 (1145)
.+..+.|+|.|++.
T Consensus 85 ~g~~v~l~v~R~~~ 98 (101)
T 2jik_A 85 AGYAVSLRVQHRLE 98 (101)
T ss_dssp CCSEEEEEEEEESC
T ss_pred CCCeEEEEEEeCCC
Confidence 88889999998764
No 108
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.31 E-value=1.1e-11 Score=116.84 Aligned_cols=89 Identities=33% Similarity=0.616 Sum_probs=79.8
Q ss_pred ccEEEEeecCCcceeEEEEccCCc----ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCC
Q psy6910 1032 QYHAIELSRGTRGFGFSIRGGREF----QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGD 1107 (1145)
Q Consensus 1032 ~~~~v~l~k~~~~lG~sl~gg~~~----~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~ 1107 (1145)
..++|.|.|+..+|||++.++.+. ...+++|..|.++|+|+++|+|++||+|++|||.++.++++.+++.+++..+
T Consensus 3 ~~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 82 (105)
T 2awx_A 3 KIMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNTS 82 (105)
T ss_dssp CEEEEEEECBTTBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSCC
T ss_pred eEEEEEEEECCCCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 467899999989999999987653 1358999999999999999999999999999999999999999999999988
Q ss_pred CeEEEEEEeCCCc
Q psy6910 1108 STVRLLIKRGGSV 1120 (1145)
Q Consensus 1108 ~~v~L~v~R~~~~ 1120 (1145)
..+.|+|.|++..
T Consensus 83 ~~v~l~v~R~~~~ 95 (105)
T 2awx_A 83 DFVYLKVAKPTSM 95 (105)
T ss_dssp SEEEEEEECCCC-
T ss_pred CeEEEEEEcCCCC
Confidence 8899999998764
No 109
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.31 E-value=7.9e-12 Score=117.75 Aligned_cols=92 Identities=35% Similarity=0.626 Sum_probs=81.8
Q ss_pred CcccEEEEeecCCcceeEEEEccCCc-----ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHH
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREF-----QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIR 1104 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~-----~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk 1104 (1145)
..+.+++.|.+...+|||+|.++.+. ...+++|..|.++|+|+++|+|++||+|++|||+++.++++.+++.+|+
T Consensus 5 ~~~~~~v~l~~~~~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~ 84 (105)
T 1wha_A 5 SSGRHVACLARSERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLT 84 (105)
T ss_dssp CCEEEEEEECCCTTCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHT
T ss_pred CCeeEEEEEEeCCCccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 34668899999888999999987652 2468999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEEEeCCCcC
Q psy6910 1105 NGDSTVRLLIKRGGSVV 1121 (1145)
Q Consensus 1105 ~~~~~v~L~v~R~~~~~ 1121 (1145)
..+..+.|+|.|+....
T Consensus 85 ~~g~~v~l~v~R~~~~~ 101 (105)
T 1wha_A 85 AASPTIALLLEREAGSG 101 (105)
T ss_dssp SCCSCEEEEEEECCCCC
T ss_pred cCCCeEEEEEEECCCCC
Confidence 88888999999987543
No 110
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.31 E-value=1.5e-11 Score=114.23 Aligned_cols=91 Identities=37% Similarity=0.599 Sum_probs=81.2
Q ss_pred cccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeE
Q psy6910 1031 EQYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTV 1110 (1145)
Q Consensus 1031 ~~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v 1110 (1145)
.+.+.|.|.++..+|||++.++.+....+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..+..+
T Consensus 3 g~~~~v~l~~~~~~lG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 82 (98)
T 2opg_A 3 GCETTIEISKGRTGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQRV 82 (98)
T ss_dssp CEEEEEEEECBTTBTCEEEEECTTSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred CCEEEEEEEECCCcccEEEecCCCCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 35678999999889999999876542358999999999999999999999999999999999999999999999888889
Q ss_pred EEEEEeCCCcC
Q psy6910 1111 RLLIKRGGSVV 1121 (1145)
Q Consensus 1111 ~L~v~R~~~~~ 1121 (1145)
.|+|.|++...
T Consensus 83 ~l~v~R~~~~~ 93 (98)
T 2opg_A 83 RLTLYRDEAPY 93 (98)
T ss_dssp EEEEEECSSCC
T ss_pred EEEEEcCCCCC
Confidence 99999987654
No 111
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.31 E-value=6.6e-12 Score=114.71 Aligned_cols=86 Identities=28% Similarity=0.516 Sum_probs=77.0
Q ss_pred ccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCC--Ce
Q psy6910 1032 QYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGD--ST 1109 (1145)
Q Consensus 1032 ~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~--~~ 1109 (1145)
+.++|.|.++..+|||++.++.+. ..+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|+..+ ..
T Consensus 2 ~~~~v~l~~~~~g~G~~~~~g~~~-~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~ 80 (90)
T 2q9v_A 2 MEQDIFLWRKETGFGFRILGGNEP-GEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGH 80 (90)
T ss_dssp EEEEEEEECBTTBCCEEEEECSST-TSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTE
T ss_pred CcEEEEEEECCCccCEEEEccccC-CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCe
Confidence 357889999989999999987654 467999999999999999999999999999999999999999999999874 38
Q ss_pred EEEEEEeCC
Q psy6910 1110 VRLLIKRGG 1118 (1145)
Q Consensus 1110 v~L~v~R~~ 1118 (1145)
+.|+|.|..
T Consensus 81 v~l~v~R~~ 89 (90)
T 2q9v_A 81 VNLTVRQTR 89 (90)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEecc
Confidence 999998864
No 112
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.30 E-value=9.6e-12 Score=113.64 Aligned_cols=83 Identities=29% Similarity=0.388 Sum_probs=75.9
Q ss_pred ceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCe
Q psy6910 435 ERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGET 514 (1145)
Q Consensus 435 ~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~ 514 (1145)
+...|.|.|+..||||++.++.+ ..+++|.+|.++|||+++| |++||+|++|||+++.+++|.+++++|+. .|..
T Consensus 4 ~~r~v~l~k~~~g~G~~~~~~~~--~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~--~~~~ 78 (90)
T 2he4_A 4 RPRLCHLRKGPQGYGFNLHSDKS--RPGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKA--REDE 78 (90)
T ss_dssp CCEEEEEECBTTBCCEEEEECSS--SSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTT--SSSE
T ss_pred CcEEEEEEECCCCccEEEEccCC--CCCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCc
Confidence 34678999999999999998765 2579999999999999999 99999999999999999999999999998 4889
Q ss_pred EEEEEEeC
Q psy6910 515 VQLEVCRG 522 (1145)
Q Consensus 515 v~l~v~R~ 522 (1145)
|.|+|.|.
T Consensus 79 v~l~v~r~ 86 (90)
T 2he4_A 79 ARLLVVGP 86 (90)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcc
Confidence 99999886
No 113
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.30 E-value=5.2e-12 Score=118.75 Aligned_cols=88 Identities=27% Similarity=0.524 Sum_probs=79.4
Q ss_pred cceEEEEEEecccceeEEEecCCCCC-CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Q psy6910 434 GERIHSSLVKSLRGLGFTIVGGDDSK-EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPG 512 (1145)
Q Consensus 434 g~~~~v~l~k~~~glG~~i~gg~~~~-~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g 512 (1145)
.+.+.|.|.++..||||+|.++.+.. ..+++|..|.+++||+++|+|++||+|++|||+.+.++++.+++.+|+. .|
T Consensus 10 ~~~~~v~l~~~~~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~--~g 87 (104)
T 2djt_A 10 SGHFSVELVRGYAGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRA--GG 87 (104)
T ss_dssp CCCEEEEEECCSSSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHH--TC
T ss_pred CceEEEEEEeCCCCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CC
Confidence 45688999999999999999976542 4579999999999999999999999999999999999999999999998 58
Q ss_pred CeEEEEEEeCC
Q psy6910 513 ETVQLEVCRGY 523 (1145)
Q Consensus 513 ~~v~l~v~R~~ 523 (1145)
..|.|+|.|+-
T Consensus 88 ~~v~l~v~R~g 98 (104)
T 2djt_A 88 PQLHLVIRRPL 98 (104)
T ss_dssp SEEEEEECCCC
T ss_pred CeEEEEEEECC
Confidence 89999998874
No 114
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.30 E-value=1.3e-11 Score=113.64 Aligned_cols=87 Identities=31% Similarity=0.625 Sum_probs=78.3
Q ss_pred ccEEEEeecCCcceeEEEEccCCc----ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCC
Q psy6910 1032 QYHAIELSRGTRGFGFSIRGGREF----QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGD 1107 (1145)
Q Consensus 1032 ~~~~v~l~k~~~~lG~sl~gg~~~----~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~ 1107 (1145)
+.++|.|.++..+|||++.++.+. ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..+
T Consensus 3 ~~~~v~l~k~~~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 82 (94)
T 2fe5_A 3 TIMEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTS 82 (94)
T ss_dssp CEEEEEEECCTTCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTCC
T ss_pred EEEEEEEEECCCCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 467899999988999999987643 2458999999999999999999999999999999999999999999999888
Q ss_pred CeEEEEEEeCC
Q psy6910 1108 STVRLLIKRGG 1118 (1145)
Q Consensus 1108 ~~v~L~v~R~~ 1118 (1145)
+.+.|+|.|++
T Consensus 83 ~~v~l~v~R~g 93 (94)
T 2fe5_A 83 DMVYLKVAKPG 93 (94)
T ss_dssp SEEEEEEECCC
T ss_pred CeEEEEEEcCC
Confidence 89999999875
No 115
>2ysg_A Syntaxin-binding protein 4; synip, STXBP4, WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=99.30 E-value=1.6e-12 Score=98.74 Aligned_cols=36 Identities=44% Similarity=0.899 Sum_probs=33.6
Q ss_pred CCCCCCCCcEEEEccCCceEeeeCCCCceeccCCcc
Q psy6910 292 DLGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRL 327 (1145)
Q Consensus 292 ~~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~ 327 (1145)
...+||+|||++++.+|++|||||+|++|+|++|++
T Consensus 4 ~~~~LP~gWe~~~~~~Gr~Yy~nh~t~~ttW~~P~~ 39 (40)
T 2ysg_A 4 GSSGLPYGWEEAYTADGIKYFINHVTQTTSWIHPVM 39 (40)
T ss_dssp SSSCCCTTEEEEECSSSCEEEEESSSCCEECCCCCC
T ss_pred CcCCCCCCcEEEEcCCCCEEEEECCCCcCcCCCCCC
Confidence 456899999999999999999999999999999985
No 116
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.30 E-value=1e-11 Score=119.39 Aligned_cols=93 Identities=25% Similarity=0.433 Sum_probs=81.2
Q ss_pred cccEEEEeecCC-------cceeEEEEccCCc----ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHH
Q psy6910 1031 EQYHAIELSRGT-------RGFGFSIRGGREF----QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEA 1099 (1145)
Q Consensus 1031 ~~~~~v~l~k~~-------~~lG~sl~gg~~~----~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~ea 1099 (1145)
...+.+.+.+.. .+|||+|.++.+. ...+++|..|.++|+|+++|+|++||+|++|||.++.+++|.++
T Consensus 11 ~~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~ 90 (117)
T 1ujd_A 11 FPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEV 90 (117)
T ss_dssp SCEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHH
T ss_pred CceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHH
Confidence 445678888876 6899999987642 13479999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCeEEEEEEeCCCcCCC
Q psy6910 1100 IEIIRNGDSTVRLLIKRGGSVVAP 1123 (1145)
Q Consensus 1100 v~~lk~~~~~v~L~v~R~~~~~~~ 1123 (1145)
+.+|+..+..+.|+|.|++..+..
T Consensus 91 ~~~l~~~~~~v~l~v~R~~~~~~~ 114 (117)
T 1ujd_A 91 QSIISQQSGEAEICVRLDLNMSGP 114 (117)
T ss_dssp HHHHSCCSSCEEEEEESSCCCCCC
T ss_pred HHHHhcCCCEEEEEEEECCccccC
Confidence 999999888899999999876544
No 117
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.30 E-value=1.8e-11 Score=113.22 Aligned_cols=90 Identities=29% Similarity=0.592 Sum_probs=80.5
Q ss_pred CcccEEEEeecCCcceeEEEEccCCc--ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCC
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREF--QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGD 1107 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~--~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~ 1107 (1145)
..+.+++.|.++..+|||++.++.+. ...+++|..|.++|+|+++|+|++||+|++|||+++.++++.+++.+++..+
T Consensus 3 ~g~~~~v~l~k~~~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g 82 (96)
T 1d5g_A 3 PGDIFEVELAKNDNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG 82 (96)
T ss_dssp TTCEEEEEEECSSSSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSCC
T ss_pred CCCEEEEEEEeCCCCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 35678899999889999999987653 2458999999999999999999999999999999999999999999999988
Q ss_pred CeEEEEEEeCCC
Q psy6910 1108 STVRLLIKRGGS 1119 (1145)
Q Consensus 1108 ~~v~L~v~R~~~ 1119 (1145)
..+.|+|.|++.
T Consensus 83 ~~v~l~v~R~~~ 94 (96)
T 1d5g_A 83 QVVHLLLEKGQS 94 (96)
T ss_dssp SEEEEEEECCSC
T ss_pred CeEEEEEEcCCC
Confidence 889999998764
No 118
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.30 E-value=6.9e-12 Score=121.93 Aligned_cols=93 Identities=35% Similarity=0.632 Sum_probs=83.9
Q ss_pred CcccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCe
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDST 1109 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~ 1109 (1145)
..+.+.|.|.++..+|||++.++.+....+++|..|.++|+|+++|+|++||+|++|||+++.++++.+++.+++..+..
T Consensus 23 ~~~~~~v~l~k~~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~ 102 (124)
T 2daz_A 23 PGELHIIELEKDKNGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAPSK 102 (124)
T ss_dssp SSEEEEEEEECCSSCCCEEEECBSSTTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSCSE
T ss_pred CCceEEEEEEeCCCccCEEEeccCCCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 45678899999988999999988665457999999999999999999999999999999999999999999999998889
Q ss_pred EEEEEEeCCCcCC
Q psy6910 1110 VRLLIKRGGSVVA 1122 (1145)
Q Consensus 1110 v~L~v~R~~~~~~ 1122 (1145)
+.|+|.|++..+.
T Consensus 103 v~l~v~R~~~~~~ 115 (124)
T 2daz_A 103 VKLVFIRNEDAVN 115 (124)
T ss_dssp EEEEEEECTTHHH
T ss_pred EEEEEEeCCCccc
Confidence 9999999887643
No 119
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.29 E-value=6.1e-12 Score=120.19 Aligned_cols=87 Identities=30% Similarity=0.446 Sum_probs=78.7
Q ss_pred ceEEEEEEecccceeEEEec---CCCC--CCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Q psy6910 435 ERIHSSLVKSLRGLGFTIVG---GDDS--KEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSI 509 (1145)
Q Consensus 435 ~~~~v~l~k~~~glG~~i~g---g~~~--~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~ 509 (1145)
+.+.|.|.|+..||||+|.+ |.+. ...+++|.+|.++|||+++|+|++||+|++|||.++.++++.+++.+++.
T Consensus 4 ~~~~v~l~k~~~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~- 82 (113)
T 2g5m_B 4 ELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN- 82 (113)
T ss_dssp EEEEEECCCCSSCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHH-
T ss_pred EEEEEEEEeCCCCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc-
Confidence 56889999999999999999 5443 24589999999999999999999999999999999999999999999998
Q ss_pred CCCCeEEEEEEeCC
Q psy6910 510 SPGETVQLEVCRGY 523 (1145)
Q Consensus 510 ~~g~~v~l~v~R~~ 523 (1145)
.|..|.|+|.|..
T Consensus 83 -~g~~v~l~v~R~~ 95 (113)
T 2g5m_B 83 -TKGRVRFMIGRER 95 (113)
T ss_dssp -SCSSCEEEEEECC
T ss_pred -CCCeEEEEEEeCC
Confidence 5889999999974
No 120
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.29 E-value=6.9e-12 Score=121.08 Aligned_cols=93 Identities=30% Similarity=0.593 Sum_probs=77.0
Q ss_pred CCcccEEEEeecCCc-ceeEEEEccCCc--ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHc
Q psy6910 1029 HDEQYHAIELSRGTR-GFGFSIRGGREF--QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRN 1105 (1145)
Q Consensus 1029 ~~~~~~~v~l~k~~~-~lG~sl~gg~~~--~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~ 1105 (1145)
.....+.|.|.|+.. +|||+|.++.+. ...+++|..|.++|+|+++|.|++||+|++|||.++.++++.+++.+|+.
T Consensus 21 ~~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~ 100 (120)
T 2iwo_A 21 QSMGLRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKN 100 (120)
T ss_dssp ----CEEEEEEC----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHH
T ss_pred CCCCcEEEEEEcCCCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 345678999999875 999999987642 14589999999999999994499999999999999999999999999999
Q ss_pred CCCeEEEEEEeCCCcC
Q psy6910 1106 GDSTVRLLIKRGGSVV 1121 (1145)
Q Consensus 1106 ~~~~v~L~v~R~~~~~ 1121 (1145)
.+++|.|+|.|++...
T Consensus 101 ~~~~v~l~v~r~g~~~ 116 (120)
T 2iwo_A 101 ASGSIEMQVVAGGDVS 116 (120)
T ss_dssp CCSEEEEEEECCTTSS
T ss_pred CCCeEEEEEEECCccc
Confidence 9999999999987643
No 121
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.29 E-value=3.7e-12 Score=122.32 Aligned_cols=89 Identities=29% Similarity=0.465 Sum_probs=79.9
Q ss_pred ccceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Q psy6910 433 IGERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPG 512 (1145)
Q Consensus 433 ~g~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g 512 (1145)
.++.+.+.|.++..||||+|.++.+....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+. .+
T Consensus 15 ~~~~~~v~l~~~~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~--~~ 92 (116)
T 2dm8_A 15 PGQEMIIEISKGRSGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQ--TP 92 (116)
T ss_dssp TTSCEEEEEECCSSCCCCCCBCCTTSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHT--CC
T ss_pred CCCEEEEEEEECCCcccEEEeCCCCCCcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CC
Confidence 3456889999999999999999877534689999999999999999999999999999999999999999999998 45
Q ss_pred CeEEEEEEeCC
Q psy6910 513 ETVQLEVCRGY 523 (1145)
Q Consensus 513 ~~v~l~v~R~~ 523 (1145)
..|.|+|.|+-
T Consensus 93 ~~v~l~v~R~~ 103 (116)
T 2dm8_A 93 QKVRLVVYRDE 103 (116)
T ss_dssp SEEEEEEECCS
T ss_pred CeEEEEEEeCC
Confidence 79999998863
No 122
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.29 E-value=6.1e-12 Score=123.37 Aligned_cols=91 Identities=24% Similarity=0.437 Sum_probs=79.8
Q ss_pred CCcccEEEEeecCCcceeEEEEccCCc--ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcC
Q psy6910 1029 HDEQYHAIELSRGTRGFGFSIRGGREF--QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNG 1106 (1145)
Q Consensus 1029 ~~~~~~~v~l~k~~~~lG~sl~gg~~~--~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~ 1106 (1145)
...+.+.|.|.++..+|||+|.++.+. ...+++|..|.++++|+++|.|++||+|++|||+++.+++|++++++|+..
T Consensus 26 ~~~~~~~v~l~k~~~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 105 (130)
T 1i16_A 26 AEATVCTVTLEKMSAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL 105 (130)
T ss_dssp SSEEEEEEEEETTSSSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTS
T ss_pred CCCcEEEEEEEcCCCccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 345678899999888999999998762 256899999999999999945999999999999999999999999999998
Q ss_pred CC-eEEEEEEeCCC
Q psy6910 1107 DS-TVRLLIKRGGS 1119 (1145)
Q Consensus 1107 ~~-~v~L~v~R~~~ 1119 (1145)
++ .+.|+|+|...
T Consensus 106 ~~~~v~l~v~r~~~ 119 (130)
T 1i16_A 106 PDGPVTIVIRRKSL 119 (130)
T ss_dssp CSSEEEEEEEEESS
T ss_pred CCceEEEEEEeCCC
Confidence 65 59999998754
No 123
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.29 E-value=1.1e-11 Score=119.15 Aligned_cols=90 Identities=24% Similarity=0.317 Sum_probs=79.5
Q ss_pred ccceEEEEEEecc-cceeEEEecCCCCC--------CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHH
Q psy6910 433 IGERIHSSLVKSL-RGLGFTIVGGDDSK--------EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMV 503 (1145)
Q Consensus 433 ~g~~~~v~l~k~~-~glG~~i~gg~~~~--------~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~ 503 (1145)
.++...|.|.|+. .||||+|.||.+.. ..+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++
T Consensus 13 ~~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 92 (117)
T 2ehr_A 13 WGPPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAV 92 (117)
T ss_dssp BCCCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHH
T ss_pred CCCCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 3456789999985 79999999997631 35899999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCeEEEEEEeCCC
Q psy6910 504 SVFQSISPGETVQLEVCRGYP 524 (1145)
Q Consensus 504 ~~l~~~~~g~~v~l~v~R~~~ 524 (1145)
.+|+. .|..|.|+|.|...
T Consensus 93 ~~~~~--~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 93 EAIKN--AGNPVVFIVQSLSS 111 (117)
T ss_dssp HHHHT--SCSSEEEEECCBSC
T ss_pred HHHHc--CCCeEEEEEEECCC
Confidence 99998 58899999987643
No 124
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.29 E-value=1e-11 Score=117.62 Aligned_cols=91 Identities=29% Similarity=0.407 Sum_probs=79.9
Q ss_pred CCcccEEEEeecCCcceeEEEEccCCc---ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHc
Q psy6910 1029 HDEQYHAIELSRGTRGFGFSIRGGREF---QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRN 1105 (1145)
Q Consensus 1029 ~~~~~~~v~l~k~~~~lG~sl~gg~~~---~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~ 1105 (1145)
.....+.|.|.|.+.+|||+|.++.+. ...+++|..|.++|+|+++|+|++||+|++|||.++.+++|++++++|+.
T Consensus 12 ~~~~~~~v~l~k~~~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 91 (108)
T 2d92_A 12 WSPEVKIVELVKDCKGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKA 91 (108)
T ss_dssp SCSSCEEEEEEECSSCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHH
T ss_pred cCCceEEEEEEECCCccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 345678999999989999999986542 25689999999999999999999999999999999999999999999999
Q ss_pred C-CCeEEEEEEeCCC
Q psy6910 1106 G-DSTVRLLIKRGGS 1119 (1145)
Q Consensus 1106 ~-~~~v~L~v~R~~~ 1119 (1145)
. ++.|.|+|.|...
T Consensus 92 ~~~~~v~l~v~R~~~ 106 (108)
T 2d92_A 92 VPPGLVHLGICSGPS 106 (108)
T ss_dssp SCSEEEEEEEECCCC
T ss_pred CCCCeEEEEEEcCCC
Confidence 6 4679999998653
No 125
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.29 E-value=6.8e-12 Score=121.05 Aligned_cols=93 Identities=22% Similarity=0.284 Sum_probs=79.7
Q ss_pred CcCccceEEEEEEeccc-ceeEEEecCCCCCCccEEEEEeccCCccccc-CCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy6910 430 DELIGERIHSSLVKSLR-GLGFTIVGGDDSKEEFLQIKSVVPNGPAALE-GHLQTGDVLVYVNDKCVLGYTHHDMVSVFQ 507 (1145)
Q Consensus 430 ~~~~g~~~~v~l~k~~~-glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~-g~l~~GD~il~vNg~~~~~~~~~~~~~~l~ 507 (1145)
..-.++...|.|.|+.. +|||+|.+|.+. ..+++|.+|.++|||+++ |.|++||+|++|||+++.+++|.+++.+|+
T Consensus 10 ~~~~~~~~~v~l~k~~~~~~G~~l~gg~~~-~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~ 88 (119)
T 2cs5_A 10 GIPHDNLVLIRMKPDENGRFGFNVKGGYDQ-KMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIK 88 (119)
T ss_dssp CCCSSCCEEEEECCCSSSCCSEEEEEEGGG-TEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHH
T ss_pred CcCCCCeEEEEEEeCCCCCcCEEEecccCC-CCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 33456778999999775 599999998765 567999999999999999 459999999999999999999999999999
Q ss_pred cCCC--CCeEEEEEEeCC
Q psy6910 508 SISP--GETVQLEVCRGY 523 (1145)
Q Consensus 508 ~~~~--g~~v~l~v~R~~ 523 (1145)
.... +..|.|+|.|+.
T Consensus 89 ~~~~~~~~~v~l~v~R~~ 106 (119)
T 2cs5_A 89 ASCERHSGELMLLVRPNA 106 (119)
T ss_dssp HHHHCCSSCEEEEEECCC
T ss_pred hccccCCCEEEEEEEccc
Confidence 8421 248999999974
No 126
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.29 E-value=1e-11 Score=117.06 Aligned_cols=85 Identities=22% Similarity=0.368 Sum_probs=75.1
Q ss_pred ceEEEEEEe-cccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCC
Q psy6910 435 ERIHSSLVK-SLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGE 513 (1145)
Q Consensus 435 ~~~~v~l~k-~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~ 513 (1145)
+.++|.|.| ...||||++.+. ..+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++.+++. .+.
T Consensus 2 ~~~~v~L~k~~~~glG~~i~~~----~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~--~~~ 75 (106)
T 2la8_A 2 EKFNVDLMKKAGKELGLSLSPN----EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKG--ANG 75 (106)
T ss_dssp EEEEEEECCBSSSTTCCEEEEC----SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHS--CBS
T ss_pred eEEEEEEEeCCCCccCEEEEeC----CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhC--CCC
Confidence 468899985 567999999883 3469999999999999999999999999999999999999999999998 567
Q ss_pred eEEEEEEeCCCC
Q psy6910 514 TVQLEVCRGYPL 525 (1145)
Q Consensus 514 ~v~l~v~R~~~~ 525 (1145)
.|.|+|.|..+.
T Consensus 76 ~v~l~v~R~~~~ 87 (106)
T 2la8_A 76 KVSMEVTRPKPG 87 (106)
T ss_dssp CEEEEEEECCSC
T ss_pred eEEEEEEeCCCC
Confidence 899999997543
No 127
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.29 E-value=1.2e-11 Score=118.06 Aligned_cols=89 Identities=56% Similarity=1.044 Sum_probs=80.3
Q ss_pred CcccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCe
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDST 1109 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~ 1109 (1145)
..+.+.+.|.++..+|||++.++.+. ..+++|..|.++|+|+++|+|++||+|++|||.++.++++.+++.+++..+..
T Consensus 22 ~~~~~~v~l~~~~~glG~~l~~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~ 100 (112)
T 2r4h_A 22 SMDFYTVELERGAKGFGFSLRGGREY-NMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNGGRR 100 (112)
T ss_dssp -CCEEEEEEECBTTBTSEEEEECGGG-TCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTE
T ss_pred CCceEEEEEEcCCCccCEEEeccccC-CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 45678899999888999999987654 56899999999999999999999999999999999999999999999988889
Q ss_pred EEEEEEeCCC
Q psy6910 1110 VRLLIKRGGS 1119 (1145)
Q Consensus 1110 v~L~v~R~~~ 1119 (1145)
+.|+|.|++.
T Consensus 101 v~l~v~R~~~ 110 (112)
T 2r4h_A 101 VRLFLKRGET 110 (112)
T ss_dssp EEEEEECCEE
T ss_pred EEEEEEeCCc
Confidence 9999998764
No 128
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.29 E-value=1e-11 Score=119.38 Aligned_cols=89 Identities=17% Similarity=0.478 Sum_probs=78.7
Q ss_pred CcccEEEEeecCC-cceeEEEEccCCc--ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcC
Q psy6910 1030 DEQYHAIELSRGT-RGFGFSIRGGREF--QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNG 1106 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~-~~lG~sl~gg~~~--~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~ 1106 (1145)
....+.|.+.++. .+|||++.++.+. ...+++|..|.++|+|+++|+|++||+|++|||.++.++++.+++.+|+..
T Consensus 22 ~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 101 (118)
T 3b76_A 22 SMHEKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRT 101 (118)
T ss_dssp EEEEEEEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSC
T ss_pred CCCcEEEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4556788888875 6899999988642 256899999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEEeCC
Q psy6910 1107 DSTVRLLIKRGG 1118 (1145)
Q Consensus 1107 ~~~v~L~v~R~~ 1118 (1145)
++.|.|+|.|..
T Consensus 102 ~~~v~L~v~R~~ 113 (118)
T 3b76_A 102 SSSIVLKALEVK 113 (118)
T ss_dssp CSEEEEEEEEEE
T ss_pred CCeEEEEEEECC
Confidence 889999998743
No 129
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.29 E-value=1.3e-11 Score=114.40 Aligned_cols=89 Identities=30% Similarity=0.528 Sum_probs=78.8
Q ss_pred ccEEEEeecCCcceeEEEEccCCc---ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCC
Q psy6910 1032 QYHAIELSRGTRGFGFSIRGGREF---QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDS 1108 (1145)
Q Consensus 1032 ~~~~v~l~k~~~~lG~sl~gg~~~---~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~ 1108 (1145)
+.++|.|.++..+|||++.++.+. ...+++|..|.++|||+++|+|++||+|++|||.++.+++++++.++|+..+.
T Consensus 3 ~~~~v~l~k~~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 82 (97)
T 2jil_A 3 RTVEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQ 82 (97)
T ss_dssp EEEEEEEECBTTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSCS
T ss_pred eEEEEEEEeCCCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 356788888888999999987542 14689999999999999999999999999999999999999999999999778
Q ss_pred eEEEEEEeCCCc
Q psy6910 1109 TVRLLIKRGGSV 1120 (1145)
Q Consensus 1109 ~v~L~v~R~~~~ 1120 (1145)
.+.|+|.|++..
T Consensus 83 ~v~l~v~R~~~~ 94 (97)
T 2jil_A 83 EAALLIEYDVSE 94 (97)
T ss_dssp EEEEEEEEECCC
T ss_pred eEEEEEEeCCCc
Confidence 899999998764
No 130
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.29 E-value=1.5e-11 Score=116.59 Aligned_cols=90 Identities=27% Similarity=0.470 Sum_probs=78.8
Q ss_pred CCcccEEEEeecCCcceeEEEEccCCcc-cccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCC
Q psy6910 1029 HDEQYHAIELSRGTRGFGFSIRGGREFQ-NMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGD 1107 (1145)
Q Consensus 1029 ~~~~~~~v~l~k~~~~lG~sl~gg~~~~-~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~ 1107 (1145)
...+++.+.+.++ .+|||++.++.+.. ..+++|..|.++|+|+++|+|++||+|++|||+++.+++|++++++|+.+.
T Consensus 12 ~~~~~~~v~l~k~-~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~ 90 (109)
T 1wi4_A 12 RDPAFRVITVTKE-TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAK 90 (109)
T ss_dssp CCTTEEEEEECCS-SCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSC
T ss_pred CCCcEEEEEEeCC-CccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccc
Confidence 3556788999886 79999999887542 337999999999999999999999999999999999999999999999865
Q ss_pred ----CeEEEEEEeCCC
Q psy6910 1108 ----STVRLLIKRGGS 1119 (1145)
Q Consensus 1108 ----~~v~L~v~R~~~ 1119 (1145)
..+.|.+.|++.
T Consensus 91 ~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 91 LRSESPWEIAFIRSGP 106 (109)
T ss_dssp CSSSSCEEEEEECCCC
T ss_pred cCCCceEEEEEEeCCC
Confidence 459999999764
No 131
>2law_A Yorkie homolog; YAP, SMAD1, CDK, signal transduction, signaling protein-TRAN complex; NMR {Homo sapiens}
Probab=99.29 E-value=1.5e-12 Score=97.70 Aligned_cols=35 Identities=60% Similarity=1.266 Sum_probs=32.4
Q ss_pred CCCCCCCcEEEEccCCceEeeeCCCCceeccCCcc
Q psy6910 293 LGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRL 327 (1145)
Q Consensus 293 ~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~ 327 (1145)
.++||+|||++++.+|++|||||+|++|+|+|||+
T Consensus 4 ~~~LP~gWe~~~~~~G~~Yy~nh~t~~ttW~~Prl 38 (38)
T 2law_A 4 EGPLPDGWEQAMTQDGEIYYINHKNKTTSWLDPRL 38 (38)
T ss_dssp -CCCSSSCCEEEETTTEEEEEETTTTEEESSCTTC
T ss_pred cCCCCCCcEEEECCCCCEEEEECCCCCEeCCCCCC
Confidence 46899999999999999999999999999999974
No 132
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.28 E-value=1.6e-11 Score=111.57 Aligned_cols=84 Identities=31% Similarity=0.635 Sum_probs=75.3
Q ss_pred cEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEEE
Q psy6910 1033 YHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVRL 1112 (1145)
Q Consensus 1033 ~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~L 1112 (1145)
.+.+.+ +++.+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||.++.++++.+++.+++..+..+.|
T Consensus 4 ~~~v~l-~~~~~~G~~l~~g~~~-~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l 80 (88)
T 2uzc_A 4 NYSVSL-VGPAPWGFRLQGGKDF-NMPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSLNM 80 (88)
T ss_dssp EEEEEE-ESSSCCCEEEEEEGGG-TEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEE
T ss_pred EEEEEE-cCCCcccEEEECcCCC-CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEE
Confidence 467777 5667999999987765 5689999999999999999 999999999999999999999999999988888999
Q ss_pred EEEeCCC
Q psy6910 1113 LIKRGGS 1119 (1145)
Q Consensus 1113 ~v~R~~~ 1119 (1145)
+|.|++.
T Consensus 81 ~v~R~g~ 87 (88)
T 2uzc_A 81 TLQRESD 87 (88)
T ss_dssp EEECCCC
T ss_pred EEEeCCC
Confidence 9999764
No 133
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=99.28 E-value=1.7e-11 Score=145.27 Aligned_cols=144 Identities=17% Similarity=0.242 Sum_probs=112.0
Q ss_pred CceEEEEeCCCChhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhccCCCeEEEEEeeccCCCCcccccCCCCCeEE
Q psy6910 844 SQVSIGHIVPGGAADLDGRLCTGDEIVSVDNLSVLNSSHHHVVELMGKASVYGRVTLGIRRKVMPPAETTSMMLGYPYDV 923 (1145)
Q Consensus 844 ~~i~V~~V~pgs~A~~~G~L~~GD~IlsVNG~~v~~~s~~~~~~~L~~~~~~~~v~L~v~r~~~~~~~~~~~~~~~~~~V 923 (1145)
.+++|..|.++|||+++| |++||+|++|||.++. ++.++...+.....+..+.|+|.|++... .+.+
T Consensus 282 ~G~~V~~V~~~spA~~aG-L~~GDvI~~vnG~~v~--~~~~l~~~l~~~~~g~~v~l~V~R~g~~~----------~~~v 348 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAG-LKAGDIITQINDTKIT--QATQVKTTISLLRVGSTVKIIVERDNKPL----------TLSA 348 (451)
T ss_dssp CCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHHTSCTTCEEEEEEEETTEEE----------EEEE
T ss_pred ceEEEEecCCCChHHHcC-CCCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCEEEEEEEECCEEE----------EEEE
Confidence 678999999999999999 9999999999999999 66788888887666778999999976441 1222
Q ss_pred EEeccC----------CCcccEEEeecCC-------CCCceEEEeCCCCcccccCCCCCCCEEEEECCeeecccCHHHHH
Q psy6910 924 TITRRE----------NEGFGFVIISSLN-------KAGSTIGRIIEDSPADRSGELHLGDHILAVNHVDIMSLHHGEIV 986 (1145)
Q Consensus 924 ~l~r~~----------~~~lG~~l~~~~~-------~~g~~I~~v~~gs~A~~~G~L~~GD~Il~VNG~~v~~~~~~~~~ 986 (1145)
++.... ...+|+.+..... ..+++|..|.++|+|+++| |++||+|++|||+++.+ ..++.
T Consensus 349 ~l~~~~~~~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~Gv~V~~V~~gspA~~aG-L~~GD~I~~Vng~~v~~--~~~~~ 425 (451)
T 3pv2_A 349 VVTDIKSHEQKLQSNNPFLYGLALRAFEQESPPHGNVIGVQVVGASENSAGWRAG-IRPGDIIISANKKPVTD--VKSLQ 425 (451)
T ss_dssp ECBCHHHHHHHHHHHSTTTTTEEEEEEEEECTTSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHH
T ss_pred EEccCCccccccccccccccccccccCChhHhcccCCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHH
Confidence 222111 1234554432110 1367999999999999999 99999999999999975 47788
Q ss_pred HHHHcCCCEEEEEEeCC
Q psy6910 987 NLIKDSGYCVTLTIGAP 1003 (1145)
Q Consensus 987 ~~l~~~~~~v~L~v~r~ 1003 (1145)
.+++..++.+.|.|.|.
T Consensus 426 ~~l~~~~~~v~l~v~R~ 442 (451)
T 3pv2_A 426 TIAQEKKKELLVQVLRG 442 (451)
T ss_dssp HHTTSSCSCEEEEEEET
T ss_pred HHHhcCCCeEEEEEEEC
Confidence 88888888899999773
No 134
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.28 E-value=1.4e-11 Score=119.99 Aligned_cols=92 Identities=25% Similarity=0.298 Sum_probs=79.4
Q ss_pred CCCcCccceEEEEEEecc-cceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy6910 428 NPDELIGERIHSSLVKSL-RGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVF 506 (1145)
Q Consensus 428 ~p~~~~g~~~~v~l~k~~-~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l 506 (1145)
+...+.-....|.|.|.. .||||++.||.+. ..+++|.+|.++|||+++|+|++||+|++|||.++.+++|.+++.+|
T Consensus 12 ~~~g~~~~~~~v~l~k~~~~~lG~~i~gg~~~-~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l 90 (125)
T 3hpk_A 12 DKLGIPTVPGKVTLQKDAQNLIGISIGGGAQY-CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMI 90 (125)
T ss_dssp --CCCCEEEEEEEEECCTTSCCCEEEEECSSC-CSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred cccCCcCCCeEEEEEeCCCCCcCEEEeccCCC-CCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 334445566788898865 5899999999775 56899999999999999999999999999999999999999999999
Q ss_pred hcCCCCCeEEEEEEeC
Q psy6910 507 QSISPGETVQLEVCRG 522 (1145)
Q Consensus 507 ~~~~~g~~v~l~v~R~ 522 (1145)
++ .+..|+|+|.|.
T Consensus 91 ~~--~~~~v~l~v~r~ 104 (125)
T 3hpk_A 91 QE--VKGEVTIHYNKL 104 (125)
T ss_dssp HH--SCSEEEEEEEEE
T ss_pred Hc--CCCeEEEEEEEC
Confidence 99 456799999884
No 135
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.28 E-value=1e-11 Score=116.50 Aligned_cols=88 Identities=31% Similarity=0.468 Sum_probs=77.9
Q ss_pred cCccceEEEEEEecccceeEEEecCCCC-------CCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHH
Q psy6910 431 ELIGERIHSSLVKSLRGLGFTIVGGDDS-------KEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMV 503 (1145)
Q Consensus 431 ~~~g~~~~v~l~k~~~glG~~i~gg~~~-------~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~ 503 (1145)
++..+.+.|.+.|++ ||||+|.||.+. ...+++|.+|.++|||++ | |++||+|++|||+++.++++.+++
T Consensus 7 ~~~~~~~~v~l~~~~-~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~ 83 (103)
T 1n7t_A 7 ELAKQEIRVRVEKDP-ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAV 83 (103)
T ss_dssp SSSCCCEEEEEECSS-CCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTEECSSCCHHHHH
T ss_pred CcccEEEEEEEccCC-CccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-C-CCCCCEEEEECCEECCCCCHHHHH
Confidence 345677889999976 999999998752 256799999999999999 6 999999999999999999999999
Q ss_pred HHHhcCCCCCeEEEEEEeCC
Q psy6910 504 SVFQSISPGETVQLEVCRGY 523 (1145)
Q Consensus 504 ~~l~~~~~g~~v~l~v~R~~ 523 (1145)
.+++. .|..|.|+|.|+.
T Consensus 84 ~~~~~--~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 84 SLLKT--FQNTVELIIVREV 101 (103)
T ss_dssp HHHHH--CCSEEEEEEECCC
T ss_pred HHhhc--CCCeEEEEEEecC
Confidence 99997 6889999999874
No 136
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.28 E-value=5.8e-12 Score=119.09 Aligned_cols=89 Identities=22% Similarity=0.312 Sum_probs=77.6
Q ss_pred ccceEEEEEEecc-cceeEEEecCCCCCCccEEEEEeccCCcccccC-CCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Q psy6910 433 IGERIHSSLVKSL-RGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEG-HLQTGDVLVYVNDKCVLGYTHHDMVSVFQSIS 510 (1145)
Q Consensus 433 ~g~~~~v~l~k~~-~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g-~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~ 510 (1145)
......+.|.|+. .+|||++.+|.+. ..+++|..|.++|||+++| +|++||+|++|||+++.+++|.+++.+|+...
T Consensus 15 ~~~~~~v~l~~~~~~~~G~~~~gg~~~-~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~ 93 (107)
T 3nfk_A 15 HDNLVLIRMKPDENGRFGFNVKGGYDQ-KMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASC 93 (107)
T ss_dssp -CCCEEEEECCCTTSCCCEEEEEEGGG-TEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGG
T ss_pred CCCEEEEEEEcCCCCCCCEEEEccCCC-CCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Confidence 3457889999976 7999999998765 5679999999999999999 69999999999999999999999999999843
Q ss_pred C--CCeEEEEEEeC
Q psy6910 511 P--GETVQLEVCRG 522 (1145)
Q Consensus 511 ~--g~~v~l~v~R~ 522 (1145)
. +..|.|+|.|+
T Consensus 94 ~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 94 ERHSGELMLLVRPN 107 (107)
T ss_dssp GSBTTBEEEEEECC
T ss_pred ccCCcEEEEEEEcC
Confidence 2 34899999874
No 137
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.28 E-value=2.3e-11 Score=111.33 Aligned_cols=83 Identities=33% Similarity=0.334 Sum_probs=71.6
Q ss_pred cceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCC
Q psy6910 434 GERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGE 513 (1145)
Q Consensus 434 g~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~ 513 (1145)
.+...|.|.|+..||||++.++.+. .+++|.+|.++|||+++| |++||+|++|||+++.++++.+++.+|+.. +.
T Consensus 2 ~~~r~v~l~r~~~g~G~~~~~~~~~--~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~--~~ 76 (91)
T 1g9o_A 2 MLPRLCCLEKGPNGYGFHLHGEKGK--LGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRAA--LN 76 (91)
T ss_dssp CCCEEEEEECBTTBCCEEEEECTTC--SSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC--SS
T ss_pred CccEEEEEEeCCCcccEEEEecCCC--CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC--CC
Confidence 3567899999999999999998653 579999999999999999 999999999999999999999999999984 34
Q ss_pred eEEEEEEe
Q psy6910 514 TVQLEVCR 521 (1145)
Q Consensus 514 ~v~l~v~R 521 (1145)
.+.+.+.|
T Consensus 77 ~~~~~~~~ 84 (91)
T 1g9o_A 77 AVRLLVVD 84 (91)
T ss_dssp EEEEEEEC
T ss_pred cEEEEEEc
Confidence 55554444
No 138
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.28 E-value=1.7e-11 Score=111.55 Aligned_cols=84 Identities=33% Similarity=0.474 Sum_probs=72.9
Q ss_pred cceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCC
Q psy6910 434 GERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGE 513 (1145)
Q Consensus 434 g~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~ 513 (1145)
.+.+.|.|.|+..||||++.++.+ ..+++|..| +++||+ .| |++||+|++|||+.+.++++.+++++|+..+.|.
T Consensus 2 ~~~~~v~l~k~~~g~G~~~~~~~~--~~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~ 76 (88)
T 3bpu_A 2 MELITVHIVKGPMGFGFTIADSPG--GGGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGS 76 (88)
T ss_dssp EEEEEEEEECBTTBSSCEEEECTT--SSSEEEEEC-CC--CC-TT-CCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTC
T ss_pred CcEEEEEEEcCCCceeEEEEecCC--CCcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCC
Confidence 467899999999999999997644 247888887 999999 77 9999999999999999999999999999766789
Q ss_pred eEEEEEEeC
Q psy6910 514 TVQLEVCRG 522 (1145)
Q Consensus 514 ~v~l~v~R~ 522 (1145)
.|.|+|.|+
T Consensus 77 ~v~l~v~R~ 85 (88)
T 3bpu_A 77 EVTLLVQRQ 85 (88)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEeC
Confidence 999999886
No 139
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.28 E-value=2.1e-11 Score=110.06 Aligned_cols=82 Identities=35% Similarity=0.590 Sum_probs=73.7
Q ss_pred EEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcC--CCeEE
Q psy6910 1034 HAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNG--DSTVR 1111 (1145)
Q Consensus 1034 ~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~--~~~v~ 1111 (1145)
+++.+.++..+|||++.++.+. ..+++|..|.++|||+++|+|++||+|++|||.++.++++.++.++|+.. +..+.
T Consensus 2 ~~v~l~k~~~g~G~~i~~~~~~-~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~ 80 (85)
T 2i04_A 2 IHTKLRKSSRGFGFTVVGGDEP-DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVD 80 (85)
T ss_dssp EEEEEECBTTBSSEEEEECCST-TBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEE
T ss_pred EEEEEEECCCCCCEEEEcccCC-CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEE
Confidence 5678888888999999887654 56799999999999999999999999999999999999999999999986 57799
Q ss_pred EEEEe
Q psy6910 1112 LLIKR 1116 (1145)
Q Consensus 1112 L~v~R 1116 (1145)
|+|.|
T Consensus 81 l~v~R 85 (85)
T 2i04_A 81 LELCR 85 (85)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99876
No 140
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.28 E-value=2e-11 Score=117.43 Aligned_cols=93 Identities=19% Similarity=0.247 Sum_probs=81.1
Q ss_pred cccEEEEeecCC-cceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCe
Q psy6910 1031 EQYHAIELSRGT-RGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDST 1109 (1145)
Q Consensus 1031 ~~~~~v~l~k~~-~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~ 1109 (1145)
...+.|.|.+.. .+|||.+.++.+....+++|..|.++|+|+++|+|++||+|++|||+++.++++++++++|+..+..
T Consensus 14 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~ 93 (117)
T 1v62_A 14 SGPLMVEIVKTPGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASISEK 93 (117)
T ss_dssp SSSEEEEEECCTTCCCCCEEEEECCSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSCSSE
T ss_pred CCcEEEEEEcCCCCcccEEEEccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 456889999876 6899999887653234599999999999999999999999999999999999999999999988889
Q ss_pred EEEEEEeCCCcCCC
Q psy6910 1110 VRLLIKRGGSVVAP 1123 (1145)
Q Consensus 1110 v~L~v~R~~~~~~~ 1123 (1145)
+.|+|.|++.....
T Consensus 94 v~l~v~r~~~~~~~ 107 (117)
T 1v62_A 94 VRLEILPVPQSQRP 107 (117)
T ss_dssp EEEEECCBTTBCCS
T ss_pred EEEEEEECCCCCcC
Confidence 99999998875433
No 141
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.28 E-value=2.1e-11 Score=114.99 Aligned_cols=93 Identities=22% Similarity=0.495 Sum_probs=80.7
Q ss_pred CcccEEEEeecCCcceeEEEEccCCc--ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCC
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREF--QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGD 1107 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~--~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~ 1107 (1145)
..+.+++.+ ++..+|||++.++.+. ...+++|..|.++|+|+++|+|++||+|++|||.++.++++.+++.+++..+
T Consensus 9 ~~~~~~v~l-~~~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g 87 (106)
T 3axa_A 9 EPEIITVTL-KKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTS 87 (106)
T ss_dssp -CCEEEEEE-ECSSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred CceEEEEEE-CCCCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 456678888 7778999999875432 2468999999999999999999999999999999999999999999999988
Q ss_pred CeEEEEEEeCCCcCCC
Q psy6910 1108 STVRLLIKRGGSVVAP 1123 (1145)
Q Consensus 1108 ~~v~L~v~R~~~~~~~ 1123 (1145)
..+.|+|.|++..+.+
T Consensus 88 ~~v~l~v~R~~~~~~~ 103 (106)
T 3axa_A 88 SVVTLEVAKQGAIRRE 103 (106)
T ss_dssp SEEEEEEECCCSSCCC
T ss_pred CeEEEEEEeCCccccc
Confidence 8999999998876544
No 142
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.28 E-value=1.5e-11 Score=113.57 Aligned_cols=82 Identities=30% Similarity=0.477 Sum_probs=73.0
Q ss_pred eEEEEEEecccceeEEEecCCCC-------CCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy6910 436 RIHSSLVKSLRGLGFTIVGGDDS-------KEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQS 508 (1145)
Q Consensus 436 ~~~v~l~k~~~glG~~i~gg~~~-------~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~ 508 (1145)
.++|.+.++. +|||+|.||.+. ...+++|.+|.++|||++ | |++||+|++|||+++.++++.+++.+++.
T Consensus 4 ~~~v~l~~~~-~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (95)
T 1mfg_A 4 EIRVRVEKDP-ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKT 80 (95)
T ss_dssp EEEEEEECSS-SCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCBHHHHHHHHHH
T ss_pred EEEEEECCCC-CCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-C-CCCCCEEEEECCEEcCCCCHHHHHHHhhc
Confidence 4678888876 899999998752 245899999999999999 6 99999999999999999999999999997
Q ss_pred CCCCCeEEEEEEeC
Q psy6910 509 ISPGETVQLEVCRG 522 (1145)
Q Consensus 509 ~~~g~~v~l~v~R~ 522 (1145)
.|..|.|+|.|+
T Consensus 81 --~~~~v~l~v~R~ 92 (95)
T 1mfg_A 81 --FQNTVELIIVRE 92 (95)
T ss_dssp --CCSEEEEEEEEE
T ss_pred --CCCeEEEEEEeC
Confidence 688999999986
No 143
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.28 E-value=4.1e-11 Score=116.24 Aligned_cols=90 Identities=33% Similarity=0.557 Sum_probs=80.9
Q ss_pred CcccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHc--CC
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRN--GD 1107 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~--~~ 1107 (1145)
..+.++|.|.++..+|||++.++.+. ..+++|..|.++|+|+++|+|++||+|++|||+++.++++.+++++|+. .+
T Consensus 17 ~~~~~~v~l~~~~~glG~~~~~g~~~-~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g 95 (123)
T 1ueq_A 17 KGTFLSTTLKKSNMGFGFTIIGGDEP-DEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIG 95 (123)
T ss_dssp CSEEEEEEEECCTTSCSEEEECCSSS-SCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTT
T ss_pred CCcEEEEEEEeCCCceeEEEecccCC-CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 45678899999988999999987654 5689999999999999999999999999999999999999999999998 45
Q ss_pred CeEEEEEEeCCCc
Q psy6910 1108 STVRLLIKRGGSV 1120 (1145)
Q Consensus 1108 ~~v~L~v~R~~~~ 1120 (1145)
..|.|+|.|+...
T Consensus 96 ~~v~l~v~R~~~~ 108 (123)
T 1ueq_A 96 QSVNLVLCRGYPL 108 (123)
T ss_dssp CEEEEEEEESCCC
T ss_pred CeEEEEEEeCCCC
Confidence 7899999998754
No 144
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.28 E-value=1.2e-11 Score=112.45 Aligned_cols=82 Identities=16% Similarity=0.304 Sum_probs=72.5
Q ss_pred EEEEEEecc-cceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeE
Q psy6910 437 IHSSLVKSL-RGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETV 515 (1145)
Q Consensus 437 ~~v~l~k~~-~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v 515 (1145)
..|.|.|.+ .+|||+|.++. ..+++|.+|.++|||++++.|++||+|++|||+++.++++++++++|++.+ + .|
T Consensus 3 r~V~l~K~~~~~lG~~i~~~~---~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~-~-~v 77 (88)
T 1kwa_A 3 RLVQFQKNTDEPMGITLKMNE---LNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMR-G-SI 77 (88)
T ss_dssp EEEEEEECSSSCCCEEEECSC---GGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCC-E-EE
T ss_pred EEEEEEeCCCCceeEEEEeCC---CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCC-C-cE
Confidence 568999985 79999999853 247999999999999996669999999999999999999999999999964 4 89
Q ss_pred EEEEEeCC
Q psy6910 516 QLEVCRGY 523 (1145)
Q Consensus 516 ~l~v~R~~ 523 (1145)
.|+|.|..
T Consensus 78 ~l~v~r~~ 85 (88)
T 1kwa_A 78 TFKIVPSY 85 (88)
T ss_dssp EEEEECCC
T ss_pred EEEEECCc
Confidence 99998863
No 145
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.28 E-value=2.2e-11 Score=111.47 Aligned_cols=85 Identities=25% Similarity=0.363 Sum_probs=76.5
Q ss_pred ccceEEEEEEecc--cceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Q psy6910 433 IGERIHSSLVKSL--RGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSIS 510 (1145)
Q Consensus 433 ~g~~~~v~l~k~~--~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~ 510 (1145)
+.+++.|.|.|.. .+|||+|.++.+. .+++|.+|.++|||+++| |++||+|++|||+.+.++++.+++.+++.
T Consensus 4 ~~~~~~v~l~k~~~~~~~G~~~~~~~~~--~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~-- 78 (91)
T 1m5z_A 4 PVELHKVTLYKDSGMEDFGFSVADGLLE--KGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLIAE-- 78 (91)
T ss_dssp CCEEEEEEEECCTTCSSSSEEEEECTTS--SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHT--
T ss_pred CcceEEEEEEECCCCCCccEEEEeccCC--CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc--
Confidence 5678999999965 4899999997643 579999999999999999 99999999999999999999999999997
Q ss_pred CCCeEEEEEEeC
Q psy6910 511 PGETVQLEVCRG 522 (1145)
Q Consensus 511 ~g~~v~l~v~R~ 522 (1145)
.|..|.|+|.|+
T Consensus 79 ~g~~v~l~v~R~ 90 (91)
T 1m5z_A 79 SGNKLDLVISRN 90 (91)
T ss_dssp STTEEEEEEEEC
T ss_pred CCCEEEEEEEeC
Confidence 588999999885
No 146
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.28 E-value=9e-12 Score=113.58 Aligned_cols=83 Identities=25% Similarity=0.404 Sum_probs=74.2
Q ss_pred ceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCe
Q psy6910 435 ERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGET 514 (1145)
Q Consensus 435 ~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~ 514 (1145)
+.++|.+. +..+|||+|.+|.+. ..+++|.+|.++|||+++| |++||+|++|||+++.++++.+++.+++. .|..
T Consensus 3 ~~~~v~~~-~~~~~G~~l~gg~~~-~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~--~g~~ 77 (89)
T 2q3g_A 3 DSFKVVLE-GPAPWGFRLQGGKDF-NVPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRA--CGER 77 (89)
T ss_dssp EEEEEEEE-SSSCCCEEEEEEGGG-TEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHT--CTTE
T ss_pred cEEEEEEc-CCCcccEEEECcCCC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCE
Confidence 35677776 458999999998775 5679999999999999999 99999999999999999999999999998 4789
Q ss_pred EEEEEEeC
Q psy6910 515 VQLEVCRG 522 (1145)
Q Consensus 515 v~l~v~R~ 522 (1145)
|.|+|.|+
T Consensus 78 v~l~v~R~ 85 (89)
T 2q3g_A 78 LSLGLSRA 85 (89)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEeC
Confidence 99999886
No 147
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.28 E-value=1.1e-11 Score=116.35 Aligned_cols=92 Identities=16% Similarity=0.197 Sum_probs=81.8
Q ss_pred CccccceEeEEEeCCCCCCCceeeeccccCCCceEEEEecCCccccccCCCCCCcEEEeeCCEEecCCCHHHHHHHHHhh
Q psy6910 16 THWQDKETPVTLTVPPDGSLNFSVGGGSDSGEFAYVTNINKEKVKGAEKYLEEKAIILEIQGQKVAGYTRRDTIAWLNHC 95 (1145)
Q Consensus 16 ~~~~~~v~~~~~~~~~~g~~~~~i~gg~e~g~~~~v~~i~~~~~~~~sg~l~~GD~i~evng~~v~g~~~~~~~~~l~~~ 95 (1145)
.+|. .+++|.+.|..++.|||+|.||.+.+.-++|.+|..|+.|++.+.|.+||+|++|||++|.+++..++..+|+.+
T Consensus 5 ~~~~-~~~~v~l~~~~~~~lG~~l~~g~~~~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 83 (103)
T 2dc2_A 5 QGVG-PIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQ 83 (103)
T ss_dssp -----CEEEEEEECCSSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHC
T ss_pred CCCC-CcEEEEEEeCCCCccCEEEEeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3454 577899999999999999999998887789999999999999888999999999999999999999999999999
Q ss_pred cCCCCcEEEEEecCCc
Q psy6910 96 CRSGKTLTLRTVSSAY 111 (1145)
Q Consensus 96 ~~~~~~v~~~~~p~~~ 111 (1145)
.+.|+|++.+...
T Consensus 84 ---~~~v~l~v~~~~~ 96 (103)
T 2dc2_A 84 ---RGEIEFEVVYVAL 96 (103)
T ss_dssp ---CSEEEEEEEECC-
T ss_pred ---CCcEEEEEEecCC
Confidence 8999999998755
No 148
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.27 E-value=1.7e-11 Score=114.57 Aligned_cols=89 Identities=21% Similarity=0.270 Sum_probs=75.7
Q ss_pred ceEEEEEEecc-cceeEEEecCCCC-CCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Q psy6910 435 ERIHSSLVKSL-RGLGFTIVGGDDS-KEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPG 512 (1145)
Q Consensus 435 ~~~~v~l~k~~-~glG~~i~gg~~~-~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g 512 (1145)
+...|.+.|.. .||||+|.+.... ....++|.+|.++|||+++|.|++||+|++|||+++.+.++++++++|+..+.|
T Consensus 9 ~~~~v~l~k~~g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~g 88 (101)
T 2yt7_A 9 NCREVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETKSQ 88 (101)
T ss_dssp CCEEEEEECCTTCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTTTS
T ss_pred ceEEEEEEeCCCCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 45778888765 6999999863221 123599999999999999888999999999999999999999999999987678
Q ss_pred CeEEEEEEeCC
Q psy6910 513 ETVQLEVCRGY 523 (1145)
Q Consensus 513 ~~v~l~v~R~~ 523 (1145)
..|+|+|.|..
T Consensus 89 ~~v~l~v~R~~ 99 (101)
T 2yt7_A 89 TSVTLSIVHCP 99 (101)
T ss_dssp SEEEEEECCCC
T ss_pred CeEEEEEEeCC
Confidence 99999998864
No 149
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.27 E-value=9.4e-12 Score=117.85 Aligned_cols=89 Identities=29% Similarity=0.437 Sum_probs=78.6
Q ss_pred ccceEEEEE--EecccceeEEEecCCCC----CCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy6910 433 IGERIHSSL--VKSLRGLGFTIVGGDDS----KEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVF 506 (1145)
Q Consensus 433 ~g~~~~v~l--~k~~~glG~~i~gg~~~----~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l 506 (1145)
..+.+.+.| .+...||||+|.++.+. ...+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++.+|
T Consensus 10 ~~~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l 89 (108)
T 2jre_A 10 GFSLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVL 89 (108)
T ss_dssp SCEEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHH
T ss_pred CcEEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 356788888 56778999999998654 235799999999999999999999999999999999999999999999
Q ss_pred hcCCCCCeEEEEEEeCC
Q psy6910 507 QSISPGETVQLEVCRGY 523 (1145)
Q Consensus 507 ~~~~~g~~v~l~v~R~~ 523 (1145)
+. .|..|.|+|.|+-
T Consensus 90 ~~--~g~~v~l~v~R~~ 104 (108)
T 2jre_A 90 RN--AGNPVRLLLIRRL 104 (108)
T ss_dssp HH--HCSEEEEEEEECC
T ss_pred Hc--CCCeEEEEEEeCC
Confidence 98 5889999998863
No 150
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.27 E-value=8e-12 Score=112.83 Aligned_cols=82 Identities=23% Similarity=0.324 Sum_probs=72.8
Q ss_pred eEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeE
Q psy6910 436 RIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETV 515 (1145)
Q Consensus 436 ~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v 515 (1145)
.+.|.| +++.+|||+|.+|.+. ..+++|.+|.++|||+++| |++||+|++|||..+.++++.+++.+++. .+..|
T Consensus 2 ~~~v~l-~~~~~~G~~l~gg~~~-~~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v 76 (85)
T 1rgw_A 2 AYSVTL-TGPGPWGFRLQGGKDF-NMPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTHLEAQNKIKS--ASYNL 76 (85)
T ss_dssp EEEEEE-CCSSCCCEEECCCGGG-TSCCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTTCCHHHHHHHHTT--CSSCE
T ss_pred cEEEEE-eCCCccCEEEEeccCC-CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHc--CCCeE
Confidence 367777 4567999999998765 5679999999999999988 99999999999999999999999999997 46789
Q ss_pred EEEEEeC
Q psy6910 516 QLEVCRG 522 (1145)
Q Consensus 516 ~l~v~R~ 522 (1145)
.|+|.|+
T Consensus 77 ~l~v~R~ 83 (85)
T 1rgw_A 77 SLTLQKS 83 (85)
T ss_dssp EEEEESC
T ss_pred EEEEEeC
Confidence 9999885
No 151
>2kxq_A E3 ubiquitin-protein ligase smurf2; WW, smurf2, TGF-beta, modular binding, protein BIN; NMR {Homo sapiens} PDB: 2lb0_A* 2laz_A*
Probab=99.27 E-value=3.2e-12 Score=116.04 Aligned_cols=75 Identities=12% Similarity=0.179 Sum_probs=60.5
Q ss_pred CCCCCCCCceeeeCCCCceEEEeCCCceeeCcCCccccccCCCCCCCCCCCCCCCc-ccCCCCcccCCCCCCCccc
Q psy6910 338 SDDELPYGWERIDDPAYGTYYIDHVNKQTQYENPVLQAKHRDQGAGPSEMDDNEHK-VKDSPGKRIAPQARNTLVS 412 (1145)
Q Consensus 338 ~~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~~~~~~~~~~~~~~~p~~w~-~~~~~g~~~~~~h~~~~~s 412 (1145)
+..+||+|||++.+.+|++||+||.|++|+|++|+..............+||.||+ ..+..|+.||+||....++
T Consensus 6 ~~~~LP~gWe~~~~~~Gr~YY~n~~t~~t~W~~P~~~~~~~~~~~~~~~~LP~gWe~~~~~~G~~Yy~n~~t~~t~ 81 (90)
T 2kxq_A 6 SPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNINCEELGPLPPGWEIRNTATGRVYFVDHNNRTTQ 81 (90)
T ss_dssp SCCSCCSSCEEEEETTTEEEEEETTTTEEESSCSSSCSSSCSCCGGGTCCCCSSCCEEECTTSCEEEEETTTTEEE
T ss_pred CCCCCCCCcEEEECCCCCEEEEECCCCeEeeecccccccccccCcccccccCCCceEEECCCCCEEEEECCCCcEe
Confidence 34589999999999999999999999999999998753321111113468999999 7889999999999887665
No 152
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.27 E-value=1.5e-11 Score=113.06 Aligned_cols=87 Identities=30% Similarity=0.653 Sum_probs=78.3
Q ss_pred ccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEE
Q psy6910 1032 QYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVR 1111 (1145)
Q Consensus 1032 ~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~ 1111 (1145)
..++|.|.+...+|||++.++.+. ..+++|..|.++|+|+++|.|++||+|++|||+++.++++.+++.+++..++.+.
T Consensus 5 ~~r~v~l~k~~~glG~~l~~~~~~-~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 83 (93)
T 2dkr_A 5 SSGVVELPKTDEGLGFNIMGGKEQ-NSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGSVK 83 (93)
T ss_dssp CSCEEEEECCTTCCCEEEECSSSS-SCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCCSEEE
T ss_pred CCEEEEEEeCCCCccEEEecccCC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEE
Confidence 457899999889999999987654 5689999999999999995599999999999999999999999999998888899
Q ss_pred EEEEeCCC
Q psy6910 1112 LLIKRGGS 1119 (1145)
Q Consensus 1112 L~v~R~~~ 1119 (1145)
|+|.|+..
T Consensus 84 l~v~r~~~ 91 (93)
T 2dkr_A 84 LVVRSGPS 91 (93)
T ss_dssp EEECCCCS
T ss_pred EEEEeCCC
Confidence 99988764
No 153
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.27 E-value=2.2e-11 Score=117.78 Aligned_cols=90 Identities=34% Similarity=0.550 Sum_probs=81.0
Q ss_pred ccceEEEEEEecccceeEEEecCCCCC--CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Q psy6910 433 IGERIHSSLVKSLRGLGFTIVGGDDSK--EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSIS 510 (1145)
Q Consensus 433 ~g~~~~v~l~k~~~glG~~i~gg~~~~--~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~ 510 (1145)
.++.+.+.+.+...||||+|.++.+.. ..+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++++|+..+
T Consensus 28 ~~~~~~v~l~~~~~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~ 107 (121)
T 2kom_A 28 IGKRLNIQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTK 107 (121)
T ss_dssp SCEEEEEEEECCTTCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCC
T ss_pred CCeEEEEEEEcCCCcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Confidence 457789999999999999999886531 257999999999999999999999999999999999999999999999876
Q ss_pred CCCeEEEEEEeC
Q psy6910 511 PGETVQLEVCRG 522 (1145)
Q Consensus 511 ~g~~v~l~v~R~ 522 (1145)
.|..|.|+|.|+
T Consensus 108 ~g~~v~l~v~R~ 119 (121)
T 2kom_A 108 MEGTVSLLVFRQ 119 (121)
T ss_dssp SSCEEEEEEEEC
T ss_pred CCCEEEEEEEeC
Confidence 689999999886
No 154
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.27 E-value=3.3e-11 Score=113.93 Aligned_cols=90 Identities=31% Similarity=0.561 Sum_probs=79.7
Q ss_pred CcccEEEEeecCCcceeEEEEccCCc-------ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHH
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREF-------QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEI 1102 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~-------~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~ 1102 (1145)
..+.++|.|.|+..+|||+|.++.+. ...+++|..|.++|+|+++|.|++||+|++|||+++.+++|.+++.+
T Consensus 6 ~~~~~~v~l~k~~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~ 85 (107)
T 1uhp_A 6 SGKSLTLVLHRDSGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEA 85 (107)
T ss_dssp SSEEEEEEECCSSSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHH
T ss_pred CcEEEEEEEEeCCCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 45678899999888999999987642 24689999999999999993399999999999999999999999999
Q ss_pred HHcCCCeEEEEEEeCCC
Q psy6910 1103 IRNGDSTVRLLIKRGGS 1119 (1145)
Q Consensus 1103 lk~~~~~v~L~v~R~~~ 1119 (1145)
|+..++.+.|+|.|...
T Consensus 86 ~~~~~~~v~l~v~R~~~ 102 (107)
T 1uhp_A 86 FKTAKEPIVVQVLRRTS 102 (107)
T ss_dssp HHHCCSSEEEEEEECCS
T ss_pred HHcCCCcEEEEEEeCCC
Confidence 99988899999988764
No 155
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.27 E-value=1.2e-11 Score=113.64 Aligned_cols=87 Identities=13% Similarity=0.156 Sum_probs=77.6
Q ss_pred cceEeEEEeCCCCCCCceeeeccccCCCceEEEEecCCccccccCCCCCCcEEEeeCCEEecCCCHHHHHHHHHhhcCCC
Q psy6910 20 DKETPVTLTVPPDGSLNFSVGGGSDSGEFAYVTNINKEKVKGAEKYLEEKAIILEIQGQKVAGYTRRDTIAWLNHCCRSG 99 (1145)
Q Consensus 20 ~~v~~~~~~~~~~g~~~~~i~gg~e~g~~~~v~~i~~~~~~~~sg~l~~GD~i~evng~~v~g~~~~~~~~~l~~~~~~~ 99 (1145)
+.+++|.+.|+. +.|||+|.++ +...-++|.+|..|+.|++.|.|++||+|++|||++|.+++.+++.++|+.+ .
T Consensus 3 ~~~r~v~l~k~~-~~lG~~i~~~-~~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~---~ 77 (93)
T 3o46_A 3 DSVKIIRLVKNR-EPLGATIKKD-EQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQS---Q 77 (93)
T ss_dssp -CCEEEEEEESS-SCCCEEEEEC-TTTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHC---C
T ss_pred ccEEEEEEEeCC-CCccEEEEec-CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC---C
Confidence 578999999976 4899999986 4455689999999999999999999999999999999999999999999999 8
Q ss_pred CcEEEEEecCCc
Q psy6910 100 KTLTLRTVSSAY 111 (1145)
Q Consensus 100 ~~v~~~~~p~~~ 111 (1145)
+.|+|++.|+..
T Consensus 78 ~~v~l~v~~~~~ 89 (93)
T 3o46_A 78 GAITFKIIPGSK 89 (93)
T ss_dssp EEEEEEEECC--
T ss_pred CeEEEEEEeCCC
Confidence 999999999754
No 156
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.27 E-value=1.5e-11 Score=118.64 Aligned_cols=89 Identities=30% Similarity=0.521 Sum_probs=77.0
Q ss_pred ccceEEEEEEec-ccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy6910 433 IGERIHSSLVKS-LRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISP 511 (1145)
Q Consensus 433 ~g~~~~v~l~k~-~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~ 511 (1145)
....+.+.|.|. ..||||+|.++.+....+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++.+|+..+
T Consensus 13 ~~~~~~v~l~~~~~~~lG~~i~g~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~- 91 (119)
T 1x6d_A 13 LDGIHVTILHKEEGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAR- 91 (119)
T ss_dssp CTTEEEEEEECCTTSCCSEEEECCSSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTT-
T ss_pred CCCeEEEEEEeCCCCccCEEEeCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-
Confidence 334677778875 679999999998754668999999999999999999999999999999999999999999999853
Q ss_pred CCeEEEEEEeC
Q psy6910 512 GETVQLEVCRG 522 (1145)
Q Consensus 512 g~~v~l~v~R~ 522 (1145)
+..+.|+|.|+
T Consensus 92 ~~~~~l~v~R~ 102 (119)
T 1x6d_A 92 EPRQAVIVTRK 102 (119)
T ss_dssp SSSEEEEEEEC
T ss_pred CCeEEEEEEcC
Confidence 55666888876
No 157
>2ysf_A E3 ubiquitin-protein ligase itchy homolog; AIP4, NAPP1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=99.27 E-value=3.3e-12 Score=96.94 Aligned_cols=35 Identities=43% Similarity=0.866 Sum_probs=32.9
Q ss_pred CCCCCCCcEEEEccCCceEeeeCCCCceeccCCcc
Q psy6910 293 LGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRL 327 (1145)
Q Consensus 293 ~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~ 327 (1145)
..+||+|||++++.+|++|||||+|++|+|+|||.
T Consensus 5 ~~~LP~gWe~~~~~~G~~Yy~nh~t~~ttw~~Pr~ 39 (40)
T 2ysf_A 5 SSGLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRT 39 (40)
T ss_dssp CCCCCSSEEEEECTTCCEEEEETTTCCEESSCTTT
T ss_pred cCCCCcCcEEEEcCCCCEEEEECCCCcEecCCCCC
Confidence 46799999999999999999999999999999974
No 158
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.27 E-value=1.7e-11 Score=116.67 Aligned_cols=84 Identities=33% Similarity=0.546 Sum_probs=76.9
Q ss_pred ceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCe
Q psy6910 435 ERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGET 514 (1145)
Q Consensus 435 ~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~ 514 (1145)
+...|.|.|...||||+|.++.+. +++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+. .|..
T Consensus 15 ~~~~v~l~~~~~~lG~~l~~~~~~---g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~--~g~~ 89 (111)
T 2dlu_A 15 HVEEVELINDGSGLGFGIVGGKTS---GVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRN--CGNS 89 (111)
T ss_dssp EEEEEEEECCSSCCCEEEECCSSS---SBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHH--HCSE
T ss_pred ceEEEEEEeCCCccCEEEeccCCC---CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCe
Confidence 457899999999999999987643 69999999999999999999999999999999999999999999998 5789
Q ss_pred EEEEEEeCC
Q psy6910 515 VQLEVCRGY 523 (1145)
Q Consensus 515 v~l~v~R~~ 523 (1145)
|.|+|.|+.
T Consensus 90 v~l~v~R~~ 98 (111)
T 2dlu_A 90 VRMLVARDP 98 (111)
T ss_dssp EEEEEEESC
T ss_pred EEEEEEeCC
Confidence 999999874
No 159
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.27 E-value=2.1e-11 Score=115.19 Aligned_cols=91 Identities=33% Similarity=0.597 Sum_probs=80.6
Q ss_pred CcccEEEEeecCCcceeEEEEc---cCCc--ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHH
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRG---GREF--QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIR 1104 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~g---g~~~--~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk 1104 (1145)
..+.+.|.|.+...+|||++.+ +.+. ...+++|..|.++|+|+++|+|++||+|++|||+++.++++.+++.+++
T Consensus 7 ~~~~~~v~l~k~~~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 86 (107)
T 1wf8_A 7 GLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLR 86 (107)
T ss_dssp CEEEEEEEEECBTTBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHH
T ss_pred CceEEEEEEEECCCcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 4567889999988899999998 3332 2468999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEEEeCCCc
Q psy6910 1105 NGDSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1105 ~~~~~v~L~v~R~~~~ 1120 (1145)
..+..+.|+|.|+...
T Consensus 87 ~~~~~v~l~v~R~~~~ 102 (107)
T 1wf8_A 87 NTKGNVRFVIGREKPS 102 (107)
T ss_dssp HCCSEEEEEEEEECCC
T ss_pred cCCCeEEEEEEeCCCC
Confidence 9888999999997754
No 160
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.27 E-value=1.2e-11 Score=112.58 Aligned_cols=85 Identities=19% Similarity=0.159 Sum_probs=77.0
Q ss_pred ceEeEEEeCCCCCCCceeeeccccCCCceEEEEecCCccccccCCCCCCcEEEeeCCEEecCCCHHHHHHHHHhhcCCCC
Q psy6910 21 KETPVTLTVPPDGSLNFSVGGGSDSGEFAYVTNINKEKVKGAEKYLEEKAIILEIQGQKVAGYTRRDTIAWLNHCCRSGK 100 (1145)
Q Consensus 21 ~v~~~~~~~~~~g~~~~~i~gg~e~g~~~~v~~i~~~~~~~~sg~l~~GD~i~evng~~v~g~~~~~~~~~l~~~~~~~~ 100 (1145)
+|++|.|.|++++.|||+|.++.+ .-++|.+|..|+.|++++.|++||+|++|||++|.+++.+|+.++|+.+ .+
T Consensus 1 ~~r~V~l~K~~~~~lG~~i~~~~~--~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~---~~ 75 (88)
T 1kwa_A 1 RSRLVQFQKNTDEPMGITLKMNEL--NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREM---RG 75 (88)
T ss_dssp CCEEEEEEECSSSCCCEEEECSCG--GGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHC---CE
T ss_pred CeEEEEEEeCCCCceeEEEEeCCC--CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC---CC
Confidence 478999999988999999997532 3478999999999999899999999999999999999999999999999 78
Q ss_pred cEEEEEecCC
Q psy6910 101 TLTLRTVSSA 110 (1145)
Q Consensus 101 ~v~~~~~p~~ 110 (1145)
.|+|++.+.+
T Consensus 76 ~v~l~v~r~~ 85 (88)
T 1kwa_A 76 SITFKIVPSY 85 (88)
T ss_dssp EEEEEEECCC
T ss_pred cEEEEEECCc
Confidence 9999998854
No 161
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.26 E-value=3.1e-11 Score=111.41 Aligned_cols=88 Identities=28% Similarity=0.423 Sum_probs=78.0
Q ss_pred ccEEEEeecCC--cceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCe
Q psy6910 1032 QYHAIELSRGT--RGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDST 1109 (1145)
Q Consensus 1032 ~~~~v~l~k~~--~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~ 1109 (1145)
+.+.|.|.|.. .+|||++.++.+ ..+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..+..
T Consensus 3 ~~~~v~l~k~~~~~~lG~~~~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~ 80 (95)
T 2vwr_A 3 EILQVALHKRDSGEQLGIKLVRRTD--EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASGER 80 (95)
T ss_dssp EEEEEEEECSSTTCCCCEEEEECSS--SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSE
T ss_pred EEEEEEEEECCCCCcccEEEEeccC--CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 46788898853 579999987654 45899999999999999999999999999999999999999999999988889
Q ss_pred EEEEEEeCCCcC
Q psy6910 1110 VRLLIKRGGSVV 1121 (1145)
Q Consensus 1110 v~L~v~R~~~~~ 1121 (1145)
+.|+|.|++...
T Consensus 81 v~l~v~R~~~~~ 92 (95)
T 2vwr_A 81 VNLTIARPGKPE 92 (95)
T ss_dssp EEEEEEEESCSC
T ss_pred EEEEEEcCCcCc
Confidence 999999987643
No 162
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.26 E-value=1.4e-11 Score=115.61 Aligned_cols=88 Identities=26% Similarity=0.422 Sum_probs=77.1
Q ss_pred ccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHc-----C
Q psy6910 1032 QYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRN-----G 1106 (1145)
Q Consensus 1032 ~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~-----~ 1106 (1145)
..+.|.+.+...+|||+|.++.+.....++|..|.++++|+++|+|++||+|++|||.++.+++|++++++|+. .
T Consensus 6 ~~~~v~l~k~~~glG~~i~gg~~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~ 85 (103)
T 1ufx_A 6 SGTLVRVKKSAATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKD 85 (103)
T ss_dssp SSEEEEEECCSSSCCEEEECBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCSS
T ss_pred ceEEEEEEcCCCcCCeEEECCCCCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccCC
Confidence 35788888888899999999876522234999999999999999999999999999999999999999999998 4
Q ss_pred CCeEEEEEEeCCC
Q psy6910 1107 DSTVRLLIKRGGS 1119 (1145)
Q Consensus 1107 ~~~v~L~v~R~~~ 1119 (1145)
++.+.|+|.|.+.
T Consensus 86 ~~~i~l~v~r~~~ 98 (103)
T 1ufx_A 86 RDYIDFLVTEFNS 98 (103)
T ss_dssp CSEEEEEECCCCC
T ss_pred CCeEEEEEEEccc
Confidence 5679999998764
No 163
>2djy_A SMAD ubiquitination regulatory factor 2; beta sheet, polyproline type II helix, PPII, ligase/signaling protein complex; NMR {Homo sapiens} PDB: 2lb1_A
Probab=99.26 E-value=3e-12 Score=97.98 Aligned_cols=36 Identities=56% Similarity=1.089 Sum_probs=33.5
Q ss_pred CCCCCCCCcEEEEccCCceEeeeCCCCceeccCCcc
Q psy6910 292 DLGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRL 327 (1145)
Q Consensus 292 ~~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~ 327 (1145)
..++||+|||++++.+|++|||||+|++|+|+|||.
T Consensus 4 ~~~~LP~GWe~~~~~~G~~Yy~nh~t~~ttW~~Pr~ 39 (42)
T 2djy_A 4 GSGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRL 39 (42)
T ss_dssp CCSCCCSSEEEEECSSSCEEEEETTTTEEESSCTTT
T ss_pred CcCCCCcCcEEEECCCCCEEEEECCCCCEeCCCCCC
Confidence 356899999999999999999999999999999985
No 164
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.26 E-value=3.5e-12 Score=121.48 Aligned_cols=86 Identities=34% Similarity=0.570 Sum_probs=77.1
Q ss_pred eEEEEEEecc-cceeEEEecCCCC--------CCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy6910 436 RIHSSLVKSL-RGLGFTIVGGDDS--------KEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVF 506 (1145)
Q Consensus 436 ~~~v~l~k~~-~glG~~i~gg~~~--------~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l 506 (1145)
...|.|.|+. .||||+|.+|.+. ...+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++.+|
T Consensus 10 ~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l 89 (111)
T 1uju_A 10 LRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLL 89 (111)
T ss_dssp SSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHH
T ss_pred cEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4568888876 7999999998742 245799999999999999999999999999999999999999999999
Q ss_pred hcCCCCCeEEEEEEeCC
Q psy6910 507 QSISPGETVQLEVCRGY 523 (1145)
Q Consensus 507 ~~~~~g~~v~l~v~R~~ 523 (1145)
+. .|..|.|+|.|++
T Consensus 90 ~~--~g~~v~l~v~r~~ 104 (111)
T 1uju_A 90 RS--VGDTLTVLVCDGF 104 (111)
T ss_dssp SS--CSSEEEECCCCCC
T ss_pred Hc--CCCeEEEEEEECC
Confidence 98 6889999999875
No 165
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.26 E-value=2.5e-11 Score=112.44 Aligned_cols=85 Identities=35% Similarity=0.604 Sum_probs=77.3
Q ss_pred ceEEEEEEecccceeEEEecCCCC-----CCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Q psy6910 435 ERIHSSLVKSLRGLGFTIVGGDDS-----KEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSI 509 (1145)
Q Consensus 435 ~~~~v~l~k~~~glG~~i~gg~~~-----~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~ 509 (1145)
+.+.+.+.+...||||+|.+|.+. ...+++|..|.++|||+++| |++||+|++|||+.+.++++.+++..++.
T Consensus 3 ~~~~v~~~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~- 80 (97)
T 2w4f_A 3 EELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRG- 80 (97)
T ss_dssp CEEEEEEECBTTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHT-
T ss_pred eEEEEEEEeCCCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhC-
Confidence 457899999999999999998763 25689999999999999999 99999999999999999999999999988
Q ss_pred CCCCeEEEEEEeC
Q psy6910 510 SPGETVQLEVCRG 522 (1145)
Q Consensus 510 ~~g~~v~l~v~R~ 522 (1145)
.|..|.|+|.|+
T Consensus 81 -~g~~v~l~v~R~ 92 (97)
T 2w4f_A 81 -AGTAVQMRVWRE 92 (97)
T ss_dssp -SCSEEEEEEECC
T ss_pred -CCCeEEEEEEeC
Confidence 689999999986
No 166
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.26 E-value=3.1e-11 Score=110.73 Aligned_cols=86 Identities=31% Similarity=0.511 Sum_probs=77.3
Q ss_pred ccEEEEeecCC-cceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeE
Q psy6910 1032 QYHAIELSRGT-RGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTV 1110 (1145)
Q Consensus 1032 ~~~~v~l~k~~-~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v 1110 (1145)
+.++|.|.+.. .+|||++.++.+ ..+++|..|.++|||+++|+|++||+|++|||.++.++++.++..+++..++.+
T Consensus 4 ~~~~v~l~k~~~~~lG~~~~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 81 (92)
T 2qg1_A 4 DTLTIGLQKKPGKGLGLSIVGKRN--DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGTV 81 (92)
T ss_dssp CEEEEEEECCTTSCCSEEEECCSS--SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEE
T ss_pred eEEEEEEEeCCCCcccEEEEeccC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 46788898864 689999988654 468999999999999999999999999999999999999999999999888899
Q ss_pred EEEEEeCCC
Q psy6910 1111 RLLIKRGGS 1119 (1145)
Q Consensus 1111 ~L~v~R~~~ 1119 (1145)
.|+|.|.+.
T Consensus 82 ~l~v~R~~~ 90 (92)
T 2qg1_A 82 TLEVGRIST 90 (92)
T ss_dssp EEEEECCCC
T ss_pred EEEEEcccc
Confidence 999999874
No 167
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.26 E-value=1.5e-11 Score=116.37 Aligned_cols=90 Identities=22% Similarity=0.415 Sum_probs=77.4
Q ss_pred cccEEEEeecC-CcceeEEEEccCCc-ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcC--
Q psy6910 1031 EQYHAIELSRG-TRGFGFSIRGGREF-QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNG-- 1106 (1145)
Q Consensus 1031 ~~~~~v~l~k~-~~~lG~sl~gg~~~-~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~-- 1106 (1145)
.+.++|.|.+. ..+|||++.++.+. ...+++|.+|.++|+|+++|+|++||+|++|||+++.+++|++++++|+..
T Consensus 4 ~~~~~v~l~k~~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 83 (108)
T 3cbz_A 4 MNIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVH 83 (108)
T ss_dssp CCEEEEEECHHHHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHT
T ss_pred ceEEEEEEEeCCCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhccc
Confidence 35688889874 46899999987542 256899999999999999999999999999999999999999999999986
Q ss_pred -CCeEEEEEEeCCCc
Q psy6910 1107 -DSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1107 -~~~v~L~v~R~~~~ 1120 (1145)
++.|.|+|.|....
T Consensus 84 ~~~~v~l~v~R~~~~ 98 (108)
T 3cbz_A 84 KPGPIVLTVAKSGGG 98 (108)
T ss_dssp SSSCEEEEEECCCC-
T ss_pred CCCeEEEEEEeCCCC
Confidence 45799999997654
No 168
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.26 E-value=1.9e-11 Score=115.27 Aligned_cols=83 Identities=35% Similarity=0.663 Sum_probs=71.8
Q ss_pred EeecCCcceeEEEEccCCc----ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEEE
Q psy6910 1037 ELSRGTRGFGFSIRGGREF----QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVRL 1112 (1145)
Q Consensus 1037 ~l~k~~~~lG~sl~gg~~~----~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~L 1112 (1145)
.+..+..+|||+|.+|.+. ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..++.+.|
T Consensus 7 ~~~~~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l 86 (106)
T 4amh_A 7 LVPRGSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYL 86 (106)
T ss_dssp -----CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEE
T ss_pred cCCCCCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEE
Confidence 3445567899999998864 134899999999999999999999999999999999999999999999999889999
Q ss_pred EEEeCCC
Q psy6910 1113 LIKRGGS 1119 (1145)
Q Consensus 1113 ~v~R~~~ 1119 (1145)
+|.|++.
T Consensus 87 ~v~R~~~ 93 (106)
T 4amh_A 87 KVAKPGS 93 (106)
T ss_dssp EEECCSS
T ss_pred EEEeCCC
Confidence 9999875
No 169
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.26 E-value=2e-11 Score=112.95 Aligned_cols=84 Identities=31% Similarity=0.344 Sum_probs=75.2
Q ss_pred eEEEEEEecccceeEEEecCCCC-CCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCe
Q psy6910 436 RIHSSLVKSLRGLGFTIVGGDDS-KEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGET 514 (1145)
Q Consensus 436 ~~~v~l~k~~~glG~~i~gg~~~-~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~ 514 (1145)
...|.|.|+..||||++.+..+. ...+++|..|.++|||+++| |++||+|++|||+.+.++++.+++++|+. .|..
T Consensus 4 ~r~v~l~k~~~~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~ 80 (96)
T 2v90_A 4 PRCLHLEKGPQGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQG--QGSC 80 (96)
T ss_dssp CEEEEEECBTTBSCEEEEEEECTTSCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHT--TTTE
T ss_pred CEEEEEEeCCCcccEEEEeccCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCE
Confidence 46789999999999999984322 14579999999999999999 99999999999999999999999999999 4899
Q ss_pred EEEEEEeC
Q psy6910 515 VQLEVCRG 522 (1145)
Q Consensus 515 v~l~v~R~ 522 (1145)
|.|+|.|+
T Consensus 81 v~l~v~r~ 88 (96)
T 2v90_A 81 VSLTVVDP 88 (96)
T ss_dssp EEEEEECC
T ss_pred EEEEEECC
Confidence 99999987
No 170
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.26 E-value=2.1e-11 Score=111.17 Aligned_cols=84 Identities=32% Similarity=0.556 Sum_probs=74.3
Q ss_pred cEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEEE
Q psy6910 1033 YHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVRL 1112 (1145)
Q Consensus 1033 ~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~L 1112 (1145)
.+++.+. +..+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..+..+.|
T Consensus 4 ~~~v~~~-~~~~~G~~l~gg~~~-~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l 80 (89)
T 2q3g_A 4 SFKVVLE-GPAPWGFRLQGGKDF-NVPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRACGERLSL 80 (89)
T ss_dssp EEEEEEE-SSSCCCEEEEEEGGG-TEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHTCTTEEEE
T ss_pred EEEEEEc-CCCcccEEEECcCCC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEE
Confidence 4566665 457899999987664 5689999999999999999 999999999999999999999999999988888999
Q ss_pred EEEeCCC
Q psy6910 1113 LIKRGGS 1119 (1145)
Q Consensus 1113 ~v~R~~~ 1119 (1145)
+|.|++.
T Consensus 81 ~v~R~~~ 87 (89)
T 2q3g_A 81 GLSRAIT 87 (89)
T ss_dssp EEEEECC
T ss_pred EEEeCCC
Confidence 9998775
No 171
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.26 E-value=3.9e-11 Score=109.78 Aligned_cols=84 Identities=30% Similarity=0.538 Sum_probs=73.6
Q ss_pred ccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEE
Q psy6910 1032 QYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVR 1111 (1145)
Q Consensus 1032 ~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~ 1111 (1145)
..+.|.|.++..+|||++.++.+ ..+++|..|.++|||+++| |++||+|++|||.++.++++.+++++|+..++.+.
T Consensus 3 ~~r~v~l~r~~~g~G~~~~~~~~--~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~ 79 (91)
T 1g9o_A 3 LPRLCCLEKGPNGYGFHLHGEKG--KLGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVR 79 (91)
T ss_dssp CCEEEEEECBTTBCCEEEEECTT--CSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEE
T ss_pred ccEEEEEEeCCCcccEEEEecCC--CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEE
Confidence 45889999999999999988754 3589999999999999999 99999999999999999999999999999877766
Q ss_pred EEEEeCC
Q psy6910 1112 LLIKRGG 1118 (1145)
Q Consensus 1112 L~v~R~~ 1118 (1145)
+.+.+.+
T Consensus 80 ~~~~~r~ 86 (91)
T 1g9o_A 80 LLVVDPE 86 (91)
T ss_dssp EEEECCC
T ss_pred EEEEcCC
Confidence 6554433
No 172
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.26 E-value=1.9e-11 Score=110.97 Aligned_cols=82 Identities=23% Similarity=0.360 Sum_probs=72.0
Q ss_pred EEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEE
Q psy6910 437 IHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQ 516 (1145)
Q Consensus 437 ~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~ 516 (1145)
+++.+ ++..+|||+|.+|.+. ..+++|.+|.++|||+++| |++||+|++|||+++.++++.++.++|+..+ ..|.
T Consensus 4 ~~v~~-~~~~~lG~~l~~~~~~-~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~--~~v~ 78 (87)
T 2pa1_A 4 LTVDV-AGPAPWGFRITGGRDF-HTPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQSP--SPLR 78 (87)
T ss_dssp EEEEE-CSSSCCSEEEEEEGGG-TEEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHTCC--SSEE
T ss_pred EEEEE-CCCCccCEEEecccCC-CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC--CeEE
Confidence 34444 4567999999998775 5679999999999999999 9999999999999999999999999999954 7999
Q ss_pred EEEEeCC
Q psy6910 517 LEVCRGY 523 (1145)
Q Consensus 517 l~v~R~~ 523 (1145)
|+|.|+-
T Consensus 79 l~v~R~~ 85 (87)
T 2pa1_A 79 LQLDRIT 85 (87)
T ss_dssp EEEEECC
T ss_pred EEEEecC
Confidence 9999973
No 173
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.26 E-value=3e-11 Score=111.75 Aligned_cols=88 Identities=24% Similarity=0.471 Sum_probs=77.6
Q ss_pred ccEEEEeecCCcceeEEEEccCCc-ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeE
Q psy6910 1032 QYHAIELSRGTRGFGFSIRGGREF-QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTV 1110 (1145)
Q Consensus 1032 ~~~~v~l~k~~~~lG~sl~gg~~~-~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v 1110 (1145)
..+.|.|.++..+|||++.+.... ...+++|..|.++|||+++| |++||+|++|||.++.++++++++++|+..+..+
T Consensus 3 ~~r~v~l~k~~~~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v 81 (96)
T 2v90_A 3 KPRCLHLEKGPQGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQGQGSCV 81 (96)
T ss_dssp CCEEEEEECBTTBSCEEEEEEECTTSCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEE
T ss_pred CCEEEEEEeCCCcccEEEEeccCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEE
Confidence 458899999989999999874321 14579999999999999999 9999999999999999999999999999988889
Q ss_pred EEEEEeCCCc
Q psy6910 1111 RLLIKRGGSV 1120 (1145)
Q Consensus 1111 ~L~v~R~~~~ 1120 (1145)
.|+|.|++..
T Consensus 82 ~l~v~r~~~~ 91 (96)
T 2v90_A 82 SLTVVDPEAD 91 (96)
T ss_dssp EEEEECCCTT
T ss_pred EEEEECCCCc
Confidence 9999998754
No 174
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.25 E-value=2.5e-11 Score=110.81 Aligned_cols=85 Identities=31% Similarity=0.484 Sum_probs=75.3
Q ss_pred ccEEEEeecC-CcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeE
Q psy6910 1032 QYHAIELSRG-TRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTV 1110 (1145)
Q Consensus 1032 ~~~~v~l~k~-~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v 1110 (1145)
..++|.+.+. ..+|||++.++.+. ..+++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++..+..+
T Consensus 4 ~~~~v~l~k~~~~~lG~~i~~~~~~-~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~v 82 (90)
T 1qav_A 4 QRRRVTVRKADAGGLGISIKGGREN-KMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEV 82 (90)
T ss_dssp SCEEEEEECCTTTCCCEEEEEEGGG-TEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred ccEEEEEEeCCCCCcCEEEEcccCC-CCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 4688899884 56899999987654 568999999999999999339999999999999999999999999999988889
Q ss_pred EEEEEeC
Q psy6910 1111 RLLIKRG 1117 (1145)
Q Consensus 1111 ~L~v~R~ 1117 (1145)
.|+|.|-
T Consensus 83 ~l~v~r~ 89 (90)
T 1qav_A 83 VLEVKYM 89 (90)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 9999874
No 175
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.25 E-value=1.7e-11 Score=110.63 Aligned_cols=82 Identities=34% Similarity=0.615 Sum_probs=73.1
Q ss_pred EEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEEEE
Q psy6910 1034 HAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVRLL 1113 (1145)
Q Consensus 1034 ~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~L~ 1113 (1145)
+.|.|. ++.+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||.++.++++.+++.+++..++.+.|+
T Consensus 3 ~~v~l~-~~~~~G~~l~gg~~~-~~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~ 79 (85)
T 1rgw_A 3 YSVTLT-GPGPWGFRLQGGKDF-NMPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLT 79 (85)
T ss_dssp EEEEEC-CSSCCCEEECCCGGG-TSCCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTTCCHHHHHHHHTTCSSCEEEE
T ss_pred EEEEEe-CCCccCEEEEeccCC-CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHcCCCeEEEE
Confidence 567774 557899999987765 5689999999999999999 9999999999999999999999999999888889999
Q ss_pred EEeCC
Q psy6910 1114 IKRGG 1118 (1145)
Q Consensus 1114 v~R~~ 1118 (1145)
|.|++
T Consensus 80 v~R~~ 84 (85)
T 1rgw_A 80 LQKSK 84 (85)
T ss_dssp EESCC
T ss_pred EEeCC
Confidence 99875
No 176
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.25 E-value=1.3e-11 Score=114.14 Aligned_cols=86 Identities=12% Similarity=0.122 Sum_probs=77.3
Q ss_pred cceEeEEEeCCCCCCCceeeeccccCCCceEEEEecCCccccccCCCCCCcEEEeeCCEEecCCCHHHHHHHHHhhcCCC
Q psy6910 20 DKETPVTLTVPPDGSLNFSVGGGSDSGEFAYVTNINKEKVKGAEKYLEEKAIILEIQGQKVAGYTRRDTIAWLNHCCRSG 99 (1145)
Q Consensus 20 ~~v~~~~~~~~~~g~~~~~i~gg~e~g~~~~v~~i~~~~~~~~sg~l~~GD~i~evng~~v~g~~~~~~~~~l~~~~~~~ 99 (1145)
.-++.|.|.|..++.|||+|.++.+ .-++|++|..|+.|++.|.|.+||+|++|||++|.+++.+|+.++|+.. .
T Consensus 11 ~~~~~v~l~K~~~~~lG~~l~~~~~--~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~---~ 85 (97)
T 2ejy_A 11 HMVRLIQFEKVTEEPMGICLKLNEK--QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKET---K 85 (97)
T ss_dssp --CEEEEEEECSSSCCSEEEEECTT--CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHC---C
T ss_pred CccEEEEEEeCCCCCeeEEEEeCCC--CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---C
Confidence 4578999999999999999987543 3478999999999999999999999999999999999999999999998 8
Q ss_pred CcEEEEEecCC
Q psy6910 100 KTLTLRTVSSA 110 (1145)
Q Consensus 100 ~~v~~~~~p~~ 110 (1145)
+.|+|+|.|+.
T Consensus 86 ~~v~L~V~~~~ 96 (97)
T 2ejy_A 86 GMISLKVIPNQ 96 (97)
T ss_dssp EEEEEEEECCC
T ss_pred CeEEEEEEECC
Confidence 89999999975
No 177
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.25 E-value=2.2e-11 Score=116.85 Aligned_cols=97 Identities=36% Similarity=0.596 Sum_probs=84.8
Q ss_pred CcccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCe
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDST 1109 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~ 1109 (1145)
..+.+.+.+.++..+|||++.++.+....+++|..|.++|+|+++|+|++||+|++|||+++.++++.+++.+|+..+..
T Consensus 15 ~~~~~~v~l~~~~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~ 94 (116)
T 2dm8_A 15 PGQEMIIEISKGRSGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTPQK 94 (116)
T ss_dssp TTSCEEEEEECCSSCCCCCCBCCTTSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCCSE
T ss_pred CCCEEEEEEEECCCcccEEEeCCCCCCcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 34568899999888999999887654235899999999999999999999999999999999999999999999988888
Q ss_pred EEEEEEeCCCcCCCCCC
Q psy6910 1110 VRLLIKRGGSVVAPTDN 1126 (1145)
Q Consensus 1110 v~L~v~R~~~~~~~~~~ 1126 (1145)
|.|+|.|++..+.....
T Consensus 95 v~l~v~R~~~~~~~~~~ 111 (116)
T 2dm8_A 95 VRLVVYRDEAHYRDEES 111 (116)
T ss_dssp EEEEEECCSSCCCSCCC
T ss_pred EEEEEEeCCcccccccc
Confidence 99999998887665543
No 178
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.25 E-value=3e-11 Score=111.79 Aligned_cols=85 Identities=26% Similarity=0.431 Sum_probs=74.6
Q ss_pred CccceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy6910 432 LIGERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISP 511 (1145)
Q Consensus 432 ~~g~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~ 511 (1145)
..++.+.+.|.|+..||||+|.++. .+++|..|.++ |++.| |++||+|++|||+++.+++|.+++++|+..+.
T Consensus 7 ~~~~~~~v~l~~~~~g~G~~i~~~~----~Gv~V~~v~~~--a~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~ 79 (96)
T 1ujv_A 7 GQAELMTLTIVKGAQGFGFTIADSP----TGQRVKQILDI--QGCPG-LCEGDLIVEINQQNVQNLSHTEVVDILKDCPI 79 (96)
T ss_dssp CCCCCEEEEEECCSSSSSEEEEEET----TEEEEEEESCG--GGSTT-CCSSCEEEEETTEECSSCCHHHHHHHHHHSCT
T ss_pred CCceEEEEEEEeCCCceeEEEEcCC----CCEEEEEEecc--cccCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 3567899999999999999997543 25999999993 66666 99999999999999999999999999999877
Q ss_pred CCeEEEEEEeCC
Q psy6910 512 GETVQLEVCRGY 523 (1145)
Q Consensus 512 g~~v~l~v~R~~ 523 (1145)
|..|.|+|.|+.
T Consensus 80 g~~v~l~v~R~g 91 (96)
T 1ujv_A 80 GSETSLIIHRGS 91 (96)
T ss_dssp TSEEEEEEECCS
T ss_pred CCEEEEEEEECC
Confidence 899999999973
No 179
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.25 E-value=4.5e-11 Score=116.98 Aligned_cols=90 Identities=33% Similarity=0.565 Sum_probs=80.2
Q ss_pred CCcccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcC--
Q psy6910 1029 HDEQYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNG-- 1106 (1145)
Q Consensus 1029 ~~~~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~-- 1106 (1145)
...+..++.|.++..+|||++.++.+. ..+++|..|.++|+|+++|+|++||+|++|||+++.+++|.+++++|+..
T Consensus 15 ~~g~~~~v~l~~~~~g~G~~i~g~~~~-~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~ 93 (129)
T 2kpk_A 15 LKGKFIHTKLRKSSRGFGFTVVGGDEP-DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPI 93 (129)
T ss_dssp SCSEEEEEEEEECSSCCSEEEEEEEET-TEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCT
T ss_pred cCCcEEEEEEEECCCcccEEEeCccCC-CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 345678889999888999999986543 56799999999999999999999999999999999999999999999987
Q ss_pred CCeEEEEEEeCCC
Q psy6910 1107 DSTVRLLIKRGGS 1119 (1145)
Q Consensus 1107 ~~~v~L~v~R~~~ 1119 (1145)
+..|.|+|.|+..
T Consensus 94 g~~v~l~v~R~~~ 106 (129)
T 2kpk_A 94 GASVDLELCRGYP 106 (129)
T ss_dssp TEEEEEEEEECSC
T ss_pred CCeEEEEEEeCCC
Confidence 5679999999874
No 180
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.25 E-value=2.6e-11 Score=112.31 Aligned_cols=87 Identities=29% Similarity=0.489 Sum_probs=78.0
Q ss_pred cceEEEEEEecccceeEEEecCCCC---CCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Q psy6910 434 GERIHSSLVKSLRGLGFTIVGGDDS---KEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSIS 510 (1145)
Q Consensus 434 g~~~~v~l~k~~~glG~~i~gg~~~---~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~ 510 (1145)
.+.+.+.|.++..||||++.++.+. ...+++|..|.++|||+++|+|++||+|++|||+.+.++++.+++.+|+.
T Consensus 3 ~~~~~v~l~~~~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-- 80 (97)
T 2iwn_A 3 SETFDVELTKNVQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRH-- 80 (97)
T ss_dssp EEEEEEEEECBTTBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHT--
T ss_pred cEEEEEEEecCCCCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--
Confidence 3568899999999999999998552 24579999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEEEeC
Q psy6910 511 PGETVQLEVCRG 522 (1145)
Q Consensus 511 ~g~~v~l~v~R~ 522 (1145)
.|..|.|+|.|+
T Consensus 81 ~~~~v~l~v~r~ 92 (97)
T 2iwn_A 81 TGQTVLLTLMRR 92 (97)
T ss_dssp CCSEEEEEEEEE
T ss_pred CCCeEEEEEEeC
Confidence 688999999885
No 181
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.25 E-value=2.4e-11 Score=114.81 Aligned_cols=87 Identities=28% Similarity=0.413 Sum_probs=76.1
Q ss_pred cceEEEEEEecccceeEEEecCCCCC-----------CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHH
Q psy6910 434 GERIHSSLVKSLRGLGFTIVGGDDSK-----------EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDM 502 (1145)
Q Consensus 434 g~~~~v~l~k~~~glG~~i~gg~~~~-----------~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~ 502 (1145)
++...|.|.|...||||+|.++.+.. ...++|..|.++|||+++| |++||+|++|||+.+.++++.++
T Consensus 5 ~~~r~v~l~k~~~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~ 83 (107)
T 3qe1_A 5 GSPRVVRIVKSESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATHKQV 83 (107)
T ss_dssp -CCEEEEEECBTTBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred CCcEEEEEEECCCCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 56678999999999999999985531 1235799999999999999 99999999999999999999999
Q ss_pred HHHHhcCCCCCeEEEEEEeCC
Q psy6910 503 VSVFQSISPGETVQLEVCRGY 523 (1145)
Q Consensus 503 ~~~l~~~~~g~~v~l~v~R~~ 523 (1145)
+.+|+. .|..|.|+|.|..
T Consensus 84 ~~~l~~--~g~~v~l~v~r~~ 102 (107)
T 3qe1_A 84 VDLIRA--GEKELILTVLSVE 102 (107)
T ss_dssp HHHHHH--CSSEEEEEEECSS
T ss_pred HHHHHc--CCCEEEEEEEcCC
Confidence 999997 5889999999863
No 182
>2zaj_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; BAI1-associated protein 1 (BAP-1); NMR {Homo sapiens}
Probab=99.25 E-value=4.5e-12 Score=100.10 Aligned_cols=39 Identities=23% Similarity=0.335 Sum_probs=35.6
Q ss_pred cccCCCCCCCCcEEEEccCCceEeeeCCCCceeccCCcc
Q psy6910 289 LELDLGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRL 327 (1145)
Q Consensus 289 ~~~~~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~ 327 (1145)
..+...+||+|||++++.+|++|||||+|++|+|++|+.
T Consensus 7 ~~~~~~~LP~GWe~~~d~~Gr~YYvnh~t~~T~We~P~~ 45 (49)
T 2zaj_A 7 GLDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPSG 45 (49)
T ss_dssp CCCCSSCCCTTEEEEEETTTEEEEEETTTTEEESSCCCS
T ss_pred ccCCCCCCCcCceEEEcCCCCEEEEeCCCCCEecCCCCC
Confidence 345678999999999999999999999999999999975
No 183
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.25 E-value=2.6e-11 Score=124.15 Aligned_cols=88 Identities=32% Similarity=0.612 Sum_probs=78.2
Q ss_pred CcccEEEEeecCCcceeEEEEc---cCCc--ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHH
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRG---GREF--QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIR 1104 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~g---g~~~--~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk 1104 (1145)
..+.+.|.|.++..+|||+|.+ +.+. ...+++|..|.++|+|+++|+|++||+|++|||.++.+++|.+++.+|+
T Consensus 78 ~~~~~~v~l~k~~~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~ 157 (170)
T 3egg_C 78 RLELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLR 157 (170)
T ss_dssp TSEEEEEEEECBTTBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHH
T ss_pred CceEEEEEEEeCCCeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4456788899888899999998 3322 2468999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEEEeC
Q psy6910 1105 NGDSTVRLLIKRG 1117 (1145)
Q Consensus 1105 ~~~~~v~L~v~R~ 1117 (1145)
..+..|.|+|.|+
T Consensus 158 ~~g~~v~L~V~R~ 170 (170)
T 3egg_C 158 NTKGRVRFMIGRE 170 (170)
T ss_dssp HCCSEEEEEEEEC
T ss_pred cCCCEEEEEEEeC
Confidence 9889999999985
No 184
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.25 E-value=2.5e-11 Score=114.96 Aligned_cols=92 Identities=28% Similarity=0.573 Sum_probs=82.1
Q ss_pred CcccEEEEeecCCcceeEEEE-----ccCCc--ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHH
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIR-----GGREF--QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEI 1102 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~-----gg~~~--~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~ 1102 (1145)
..+.++|.|.++..+|||++. ++.+. ...+++|..|.++|+|+++|+|++||+|++|||.++.++++.+++.+
T Consensus 7 ~~~~~~v~l~k~~~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 86 (108)
T 1q7x_A 7 PGDIFEVELAKNDNSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVET 86 (108)
T ss_dssp SSSEEEEEEESSSCSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHH
T ss_pred CCcEEEEEEEECCCCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 466789999999899999998 65543 24689999999999999999999999999999999999999999999
Q ss_pred HHcCCCeEEEEEEeCCCcC
Q psy6910 1103 IRNGDSTVRLLIKRGGSVV 1121 (1145)
Q Consensus 1103 lk~~~~~v~L~v~R~~~~~ 1121 (1145)
++..+..+.|+|.|++...
T Consensus 87 ~~~~g~~v~l~v~R~~~~~ 105 (108)
T 1q7x_A 87 LRNTGQVVHLLLEKGQSPT 105 (108)
T ss_dssp HHHTTSEEEEEEECCCCSC
T ss_pred HHcCCCeEEEEEEeCCccC
Confidence 9998889999999987643
No 185
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.25 E-value=2.1e-11 Score=112.88 Aligned_cols=85 Identities=22% Similarity=0.366 Sum_probs=75.2
Q ss_pred cceEEEEEEe-cccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Q psy6910 434 GERIHSSLVK-SLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPG 512 (1145)
Q Consensus 434 g~~~~v~l~k-~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g 512 (1145)
.+.+++.|.+ ...||||++.+. ..+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++.+++. .+
T Consensus 7 ~~~~~v~l~~~~~~glG~~~~~~----~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~--~~ 80 (96)
T 2qkv_A 7 LEKFNVDLMKKAGKELGLSLSPN----EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKG--AN 80 (96)
T ss_dssp CCCEEEEEECBTTBCCCEEEEEC----SSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHT--CS
T ss_pred CceEEEEEEeCCCCCccEEEEeC----CCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc--CC
Confidence 4668899976 567999999883 3469999999999999999999999999999999999999999999998 56
Q ss_pred CeEEEEEEeCCC
Q psy6910 513 ETVQLEVCRGYP 524 (1145)
Q Consensus 513 ~~v~l~v~R~~~ 524 (1145)
..|.|+|.|..+
T Consensus 81 ~~v~l~v~R~~p 92 (96)
T 2qkv_A 81 GKVSMEVTRPKP 92 (96)
T ss_dssp SEEEEEEECCCC
T ss_pred CcEEEEEEeCCc
Confidence 789999998643
No 186
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.24 E-value=4.7e-12 Score=118.80 Aligned_cols=86 Identities=27% Similarity=0.501 Sum_probs=78.5
Q ss_pred ceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCe
Q psy6910 435 ERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGET 514 (1145)
Q Consensus 435 ~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~ 514 (1145)
+.+.+.+.++..||||+|.++.+. ..+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++.+++. .|..
T Consensus 11 ~~~~v~l~~~~~g~G~~~~~~~~~-~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~ 87 (103)
T 1wfv_A 11 DYFTVDMEKGAKGFGFSIRGGREY-KMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKS--GGRR 87 (103)
T ss_dssp CCEECCEECCTTSSSBCCEEETTT-TEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHH--HCSE
T ss_pred eEEEEEEecCCCcCCEEEeccccC-CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCe
Confidence 557888999989999999998775 5689999999999999999999999999999999999999999999995 6889
Q ss_pred EEEEEEeCC
Q psy6910 515 VQLEVCRGY 523 (1145)
Q Consensus 515 v~l~v~R~~ 523 (1145)
|.|+|.|+-
T Consensus 88 v~l~v~R~~ 96 (103)
T 1wfv_A 88 VRLLLKRGT 96 (103)
T ss_dssp ECEEEECTT
T ss_pred EEEEEEECC
Confidence 999999873
No 187
>2ez5_W Dnedd4, E3 ubiquitin-protein ligase NEDD4; WW domain, PY motif, binding affinity, signalling protein,ligase; NMR {Drosophila melanogaster}
Probab=99.24 E-value=5.2e-12 Score=98.79 Aligned_cols=37 Identities=43% Similarity=0.995 Sum_probs=34.0
Q ss_pred CCCCCCCCcEEEEccCCceEeeeCCCCceeccCCcch
Q psy6910 292 DLGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRLC 328 (1145)
Q Consensus 292 ~~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~~ 328 (1145)
...+||+|||++++.+|++|||||+|++|+|+||+..
T Consensus 7 ~~~~LP~gWe~~~~~~Gr~Yyinh~t~~TtW~~Pr~~ 43 (46)
T 2ez5_W 7 EEEPLPPRWSMQVAPNGRTFFIDHASRRTTWIDPRNG 43 (46)
T ss_dssp CSCCCCTTEEEEECTTSSEEEEETTTTEEESBCTTTC
T ss_pred CCCCCCcCcEEEEcCCCCEEEEECCCCCEeccCCCCC
Confidence 3468999999999999999999999999999999863
No 188
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.24 E-value=3.5e-11 Score=110.18 Aligned_cols=84 Identities=30% Similarity=0.438 Sum_probs=74.2
Q ss_pred ccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEE
Q psy6910 1032 QYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVR 1111 (1145)
Q Consensus 1032 ~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~ 1111 (1145)
..++|.|.++..+|||.+.+. .+++|..|.++|+|+++| |++||+|++|||.++.++++.+++.+|+..++.+.
T Consensus 3 ~~r~v~l~~~~~g~G~~l~~~-----~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~ 76 (91)
T 2f5y_A 3 RYRQITIPRGKDGFGFTICCD-----SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEII 76 (91)
T ss_dssp EEEEEEEECBTTBTSEEEECS-----SSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEE
T ss_pred ceEEEEEEeCCCCccEEEecC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 357889999888999999763 468999999999999999 99999999999999999999999999998888899
Q ss_pred EEEEeCCCcC
Q psy6910 1112 LLIKRGGSVV 1121 (1145)
Q Consensus 1112 L~v~R~~~~~ 1121 (1145)
|+|.|+....
T Consensus 77 l~v~R~~~~~ 86 (91)
T 2f5y_A 77 LLVWRMVPQV 86 (91)
T ss_dssp EEEEECC---
T ss_pred EEEEeCCCCC
Confidence 9999987654
No 189
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.24 E-value=8.5e-12 Score=117.10 Aligned_cols=86 Identities=24% Similarity=0.341 Sum_probs=78.2
Q ss_pred ccceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Q psy6910 433 IGERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPG 512 (1145)
Q Consensus 433 ~g~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g 512 (1145)
.|+.++|.|. +..+|||+|.+|.+. ..+++|.+|.++|||+++| |++||+|++|||+.+.++++.+++.+++. .|
T Consensus 3 ~g~~~~v~l~-~~~~~G~~l~gg~~~-~~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~--~g 77 (103)
T 1wf7_A 3 SGSSGSVSLV-GPAPWGFRLQGGKDF-NMPLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKA--CT 77 (103)
T ss_dssp CCCCEEEEEE-SSSCCSCCEEEETTT-TEEEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHH--CS
T ss_pred CCCEEEEEEe-CCCccCEEEeccccC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc--CC
Confidence 5778899998 568999999999876 5679999999999999999 99999999999999999999999999998 47
Q ss_pred CeEEEEEEeCC
Q psy6910 513 ETVQLEVCRGY 523 (1145)
Q Consensus 513 ~~v~l~v~R~~ 523 (1145)
..|.|+|.|+-
T Consensus 78 ~~v~l~v~R~g 88 (103)
T 1wf7_A 78 GSLNMTLQRAS 88 (103)
T ss_dssp SEEEEEECCCS
T ss_pred CeEEEEEEeCC
Confidence 89999998863
No 190
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=99.24 E-value=9.4e-12 Score=133.45 Aligned_cols=148 Identities=22% Similarity=0.209 Sum_probs=126.9
Q ss_pred CCcEEEEEecCCccCcccchhccccCCCCchHHHHhhhhccCcceeecccccCCCCCCCcCCccEEEeCHHHHHHHHHcC
Q psy6910 99 GKTLTLRTVSSAYVTTDLRQFLNTRFPKGSVDHDLQNIIRDNLYLRTVPVTTRTPRDGELNGVDYTFLSIEEFKQLEKSG 178 (1145)
Q Consensus 99 ~~~v~~~~~p~~~~~~~~~~~~~l~f~k~~i~~~l~~~~~~~~~~~~v~~TTR~~r~~E~~g~~Y~fvs~~~f~~~~~~~ 178 (1145)
.|.++..++|+|++ |+|+++.|...+ |+.+...+++|||+++.++.++++|+|.+.+.|..++..+
T Consensus 22 ~G~~~~lvGpsGsG-------------KSTLl~~L~g~~-pG~i~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 87 (218)
T 1z6g_A 22 NIYPLVICGPSGVG-------------KGTLIKKLLNEF-PNYFYFSVSCTTRKKREKEKEGVDYYFIDKTIFEDKLKNE 87 (218)
T ss_dssp CCCCEEEECSTTSS-------------HHHHHHHHHHHS-TTTEEECCCEECSCCCSSCCBTTTBEECCHHHHHHHHHTT
T ss_pred CCCEEEEECCCCCC-------------HHHHHHHHHhhC-CCcEEEeecccCCCCCcccccCCeEEECCHHHHHHhhhcc
Confidence 68899999999996 888998887775 5333338999999999999999999999999999999999
Q ss_pred CEEEEEEeCCcccCCCccchhhhhcCCCCceeeecCCCChhhhhhhhccc--ccccceeEecCCChhhhhhhhhccCCCC
Q psy6910 179 CLLESGLYEGNHYGTPKPVKEPYVSLPQNVNLLPGAHPSSEGKRKRNRSN--VEAMASKSIEPDMKTNGFDNKTVNMGNS 256 (1145)
Q Consensus 179 ~flE~~~~~g~~YGt~~~~i~~~~~~g~~~~~il~~~~~~~~~~~~~~~~--~~~~~~ifi~pps~~~l~~rl~~rg~~s 256 (1145)
.|+|++.|.+++||++...++++++.++ .+++++++ .+..+.+..+ .++. .+|+.+|++.+|.+|+..++.++
T Consensus 88 ~~l~~~~~~~~~~g~~~~~i~~~l~~~~--~~il~~~l--sggq~qR~~i~~~~~~-~~ll~~~~~~~Lde~~~~~d~~~ 162 (218)
T 1z6g_A 88 DFLEYDNYANNFYGTLKSEYDKAKEQNK--ICLFEMNI--NGVKQLKKSTHIKNAL-YIFIKPPSTDVLLSRLLTRNTEN 162 (218)
T ss_dssp CEEEEEEETTEEEEEEHHHHHHHHHTTC--EEEEEECH--HHHHHHTTCSSCCSCE-EEEEECSCHHHHHHHHHHTCCCC
T ss_pred chhhhhhcccccCCCcHHHHHHHHhCCC--cEEEEecH--HHHHHHHHHhcCCCcE-EEEEeCcCHHHHHHHHHhcCCCC
Confidence 9999999999999999889999999977 88888766 4455555555 5556 89999999999999999999999
Q ss_pred cccccccCC
Q psy6910 257 SDYELNDNN 265 (1145)
Q Consensus 257 ~~~i~~~~~ 265 (1145)
.+.|.+|+.
T Consensus 163 ~~~i~~~l~ 171 (218)
T 1z6g_A 163 QEQIQKRME 171 (218)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999987663
No 191
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.24 E-value=2.5e-11 Score=117.61 Aligned_cols=92 Identities=21% Similarity=0.200 Sum_probs=80.9
Q ss_pred ccceEEEEEEec-ccceeEEEecCCCC---CCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy6910 433 IGERIHSSLVKS-LRGLGFTIVGGDDS---KEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQS 508 (1145)
Q Consensus 433 ~g~~~~v~l~k~-~~glG~~i~gg~~~---~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~ 508 (1145)
..+.+.|.|.|+ ..||||+|.++... ....++|..|.+++||+++|+|++||+|++|||+.+.++++.+++++|+.
T Consensus 13 ~~~~~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 92 (122)
T 1v5q_A 13 HTETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRD 92 (122)
T ss_dssp CEEEEEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHH
T ss_pred cceeEEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 456788999998 48999999997321 24569999999999999999999999999999999999999999999998
Q ss_pred CCCCCeEEEEEEeCCC
Q psy6910 509 ISPGETVQLEVCRGYP 524 (1145)
Q Consensus 509 ~~~g~~v~l~v~R~~~ 524 (1145)
.+.|..|+|+|.|+..
T Consensus 93 ~~~g~~v~l~v~R~~~ 108 (122)
T 1v5q_A 93 SSITSKVTLEIEFDVA 108 (122)
T ss_dssp HTTTTCEEEEEEEECC
T ss_pred CCCCCeEEEEEEECCc
Confidence 7668899999999753
No 192
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.24 E-value=3.4e-11 Score=113.15 Aligned_cols=84 Identities=29% Similarity=0.351 Sum_probs=76.3
Q ss_pred ceEEEEEEecc-cceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCC
Q psy6910 435 ERIHSSLVKSL-RGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGE 513 (1145)
Q Consensus 435 ~~~~v~l~k~~-~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~ 513 (1145)
....|.|.|.. .+|||+|.++.+. ..+++|..|.+++||+++| |++||+|++|||+.+.++++.+++++|+. |.
T Consensus 15 ~~~~v~l~k~~~~~lG~~~~~~~~~-~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~---~~ 89 (104)
T 1wi2_A 15 LPRIVTLKKPPGAQLGFNIRGGKAS-QLGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILKT---AR 89 (104)
T ss_dssp CCEEEEECCCTTCCCSEEEECCSSS-CCCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHHH---SS
T ss_pred CCEEEEEEeCCCCCccEEEEcccCC-CCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC---CC
Confidence 45789999986 7899999998765 5679999999999999999 99999999999999999999999999998 67
Q ss_pred eEEEEEEeCC
Q psy6910 514 TVQLEVCRGY 523 (1145)
Q Consensus 514 ~v~l~v~R~~ 523 (1145)
.|.|+|.|+.
T Consensus 90 ~v~l~v~r~~ 99 (104)
T 1wi2_A 90 EISMRVRFFS 99 (104)
T ss_dssp SEEEEEECCC
T ss_pred EEEEEEEECC
Confidence 8999999873
No 193
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.24 E-value=2.5e-11 Score=119.23 Aligned_cols=86 Identities=27% Similarity=0.389 Sum_probs=75.2
Q ss_pred ceEEEEEEe-cccceeEEEecCCCCC-----------CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHH
Q psy6910 435 ERIHSSLVK-SLRGLGFTIVGGDDSK-----------EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDM 502 (1145)
Q Consensus 435 ~~~~v~l~k-~~~glG~~i~gg~~~~-----------~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~ 502 (1145)
+...|.|.| +..||||+|.++.+.. ..+++|.+|.++|||+++| |++||+|++|||+++.++++.++
T Consensus 27 ~~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~ 105 (132)
T 3l4f_D 27 KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQV 105 (132)
T ss_dssp CCCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCTTSCHHHH
T ss_pred CCEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 345788888 4579999999997631 1269999999999999999 99999999999999999999999
Q ss_pred HHHHhcCCCCCeEEEEEEeCC
Q psy6910 503 VSVFQSISPGETVQLEVCRGY 523 (1145)
Q Consensus 503 ~~~l~~~~~g~~v~l~v~R~~ 523 (1145)
+.+|+. .|..|.|+|.|..
T Consensus 106 ~~~l~~--~g~~v~l~v~~~~ 124 (132)
T 3l4f_D 106 VNMIRQ--GGNTLMVKVVMVT 124 (132)
T ss_dssp HHHHHH--TTTEEEEEEECCC
T ss_pred HHHHHc--CCCEEEEEEEECC
Confidence 999998 6889999998864
No 194
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.24 E-value=2.4e-11 Score=114.78 Aligned_cols=87 Identities=28% Similarity=0.490 Sum_probs=77.2
Q ss_pred CcccEEEEeecCC-cceeEEEEccCCcccccEEEEEEcCCChhcccC-CCCCCCEEEEECCEEcCCCCHHHHHHHHHcCC
Q psy6910 1030 DEQYHAIELSRGT-RGFGFSIRGGREFQNMALFVLQIAENGPAALDG-HLKVGDEIVEINGINTKNMTHAEAIEIIRNGD 1107 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~-~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G-~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~ 1107 (1145)
....+.+.|.++. .+|||++.++.+. ..+++|..|.++|+|+++| +|++||+|++|||.++.++++.+++.+|+..+
T Consensus 15 ~~~~~~v~l~~~~~~~~G~~~~gg~~~-~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~ 93 (107)
T 3nfk_A 15 HDNLVLIRMKPDENGRFGFNVKGGYDQ-KMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASC 93 (107)
T ss_dssp -CCCEEEEECCCTTSCCCEEEEEEGGG-TEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGG
T ss_pred CCCEEEEEEEcCCCCCCCEEEEccCCC-CCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Confidence 4567889998876 6899999987664 5689999999999999999 69999999999999999999999999999876
Q ss_pred C----eEEEEEEeC
Q psy6910 1108 S----TVRLLIKRG 1117 (1145)
Q Consensus 1108 ~----~v~L~v~R~ 1117 (1145)
. .+.|+|.|+
T Consensus 94 ~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 94 ERHSGELMLLVRPN 107 (107)
T ss_dssp GSBTTBEEEEEECC
T ss_pred ccCCcEEEEEEEcC
Confidence 5 899999874
No 195
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.24 E-value=3.4e-11 Score=111.86 Aligned_cols=87 Identities=32% Similarity=0.571 Sum_probs=76.6
Q ss_pred ccEEEEeec-CCcceeEEEEccCCcc-----cccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHc
Q psy6910 1032 QYHAIELSR-GTRGFGFSIRGGREFQ-----NMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRN 1105 (1145)
Q Consensus 1032 ~~~~v~l~k-~~~~lG~sl~gg~~~~-----~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~ 1105 (1145)
..+.+.|.| ...+|||++.++.+.. ..+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|+.
T Consensus 5 ~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 84 (98)
T 1ihj_A 5 LIHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKE 84 (98)
T ss_dssp EEEEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred eEEEEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 357788988 6679999998876531 2489999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEEeCC
Q psy6910 1106 GDSTVRLLIKRGG 1118 (1145)
Q Consensus 1106 ~~~~v~L~v~R~~ 1118 (1145)
.+..+.|+|.|++
T Consensus 85 ~g~~v~l~v~R~g 97 (98)
T 1ihj_A 85 ADFKIELEIQTFD 97 (98)
T ss_dssp SCSEEEEEEEEC-
T ss_pred CCCeEEEEEEeCC
Confidence 8889999999976
No 196
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.24 E-value=3.1e-11 Score=111.69 Aligned_cols=84 Identities=30% Similarity=0.441 Sum_probs=72.9
Q ss_pred ceEEEEEEecc-cceeEEEec-------CCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy6910 435 ERIHSSLVKSL-RGLGFTIVG-------GDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVF 506 (1145)
Q Consensus 435 ~~~~v~l~k~~-~glG~~i~g-------g~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l 506 (1145)
+...|.|.|.. .+|||+|.+ +.+. ..+++|.+|.++|||+++| |++||+|++|||+++.++++.+++++|
T Consensus 4 ~~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~-~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l 81 (96)
T 2ego_A 4 QRKVLTLEKGDNQTFGFEIQTYGLHHREEQRV-EMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDII 81 (96)
T ss_dssp CEEEEEEECCTTCCCSEEEEEEEC-------C-CEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred ccEEEEEEeCCCCCccEEEEeccccccCCCCC-CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 45789999987 699999998 2222 4579999999999999999 999999999999999999999999999
Q ss_pred hcCCCCCeEEEEEEeC
Q psy6910 507 QSISPGETVQLEVCRG 522 (1145)
Q Consensus 507 ~~~~~g~~v~l~v~R~ 522 (1145)
+.. +..|.|+|.|+
T Consensus 82 ~~~--~~~v~l~v~~~ 95 (96)
T 2ego_A 82 KAS--GNVLRLETLYG 95 (96)
T ss_dssp HHT--TTEEEEEEECC
T ss_pred HhC--CCeEEEEEEEC
Confidence 994 56999999764
No 197
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=99.24 E-value=1.6e-11 Score=130.07 Aligned_cols=149 Identities=22% Similarity=0.274 Sum_probs=105.8
Q ss_pred CCCcEEEEEecCCccCcccchhccccCCCCchHHHHhhhhccCcceeecccccCCCCCCCcCCccEEEeCHHHHHHHHHc
Q psy6910 98 SGKTLTLRTVSSAYVTTDLRQFLNTRFPKGSVDHDLQNIIRDNLYLRTVPVTTRTPRDGELNGVDYTFLSIEEFKQLEKS 177 (1145)
Q Consensus 98 ~~~~v~~~~~p~~~~~~~~~~~~~l~f~k~~i~~~l~~~~~~~~~~~~v~~TTR~~r~~E~~g~~Y~fvs~~~f~~~~~~ 177 (1145)
+.|.+...++|+|++ |+|+++.|...+.+. +...+.+++|.++.++.++.+|+|.+.+.|..++.+
T Consensus 4 ~~g~~i~l~G~~GsG-------------KSTl~~~L~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (207)
T 2j41_A 4 EKGLLIVLSGPSGVG-------------KGTVRKRIFEDPSTS-YKYSISMTTRQMREGEVDGVDYFFKTRDAFEALIKD 69 (207)
T ss_dssp CCCCEEEEECSTTSC-------------HHHHHHHHHHCTTCC-EECCCCEECSCCCTTCCBTTTBEECCHHHHHHHHHT
T ss_pred CCCCEEEEECCCCCC-------------HHHHHHHHHHhhCCC-eEEecccccCCCCCCccCCCceEEcCHHHHHHHHHc
Confidence 368899999999996 889998887775343 334678999999999999999999999999999999
Q ss_pred CCEEEEEEeCCcccCCCccchhhhhcCCCCceeeecCCCChhhhhhhhcccccccceeEecCCChhhhhhhhhccCCCCc
Q psy6910 178 GCLLESGLYEGNHYGTPKPVKEPYVSLPQNVNLLPGAHPSSEGKRKRNRSNVEAMASKSIEPDMKTNGFDNKTVNMGNSS 257 (1145)
Q Consensus 178 ~~flE~~~~~g~~YGt~~~~i~~~~~~g~~~~~il~~~~~~~~~~~~~~~~~~~~~~ifi~pps~~~l~~rl~~rg~~s~ 257 (1145)
+.|++|..+.+++||++.+.++.+++.|+ .||+|+... +...+++.+++.+ .||+.||+.+++.+||..|+.++.
T Consensus 70 ~~~~~~~~~~~~~~g~~~~~i~~~l~~g~--~vv~d~~~~--~~~~~~~~~~~~~-~i~~~~~~~~~~~~Rl~~R~~~~~ 144 (207)
T 2j41_A 70 DQFIEYAEYVGNYYGTPVQYVKDTMDEGH--DVFLEIEVE--GAKQVRKKFPDAL-FIFLAPPSLEHLRERLVGRGTESD 144 (207)
T ss_dssp TCEEEEEEETTEEEEEEHHHHHHHHHTTC--EEEEECCGG--GHHHHHHHCTTSE-EEEEECCC----------------
T ss_pred CCeEEEEeECCeecCCCHHHHHHHHHcCC--eEEEEECHH--HHHHHHHhcCCeE-EEEEECCCHHHHHHHHHhcCCCCH
Confidence 99999999999999999999999999877 999997663 3445556666777 899999999999999999987777
Q ss_pred ccccccCC
Q psy6910 258 DYELNDNN 265 (1145)
Q Consensus 258 ~~i~~~~~ 265 (1145)
+++.+|+.
T Consensus 145 ~~~~~rl~ 152 (207)
T 2j41_A 145 EKIQSRIN 152 (207)
T ss_dssp --------
T ss_pred HHHHHHHH
Confidence 77776664
No 198
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.24 E-value=4.7e-11 Score=113.41 Aligned_cols=91 Identities=29% Similarity=0.554 Sum_probs=81.7
Q ss_pred CcccEEEEeecCCcceeEEEEccCCc--ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCC
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREF--QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGD 1107 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~--~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~ 1107 (1145)
..+.++|.|.++..+|||++.++.+. ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..+
T Consensus 6 ~~~~~~v~l~~~~~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 85 (110)
T 1um1_A 6 SGYVFTVELERGPSGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGG 85 (110)
T ss_dssp CCCEEEEEEECCTTCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTCC
T ss_pred CCcEEEEEEEECCCccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 45678999999888999999987643 2468999999999999999999999999999999999999999999999988
Q ss_pred CeEEEEEEeCCCc
Q psy6910 1108 STVRLLIKRGGSV 1120 (1145)
Q Consensus 1108 ~~v~L~v~R~~~~ 1120 (1145)
..+.|+|.|++..
T Consensus 86 ~~v~l~v~R~~~~ 98 (110)
T 1um1_A 86 KKMRFLVAKSDVE 98 (110)
T ss_dssp SEEEEEEECCCHH
T ss_pred CeEEEEEEeCCcc
Confidence 8999999998753
No 199
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.23 E-value=1.1e-11 Score=113.59 Aligned_cols=83 Identities=34% Similarity=0.395 Sum_probs=73.8
Q ss_pred ceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCe
Q psy6910 435 ERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGET 514 (1145)
Q Consensus 435 ~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~ 514 (1145)
+...|.|.|+..||||++.++.+. .+++|.+|.++|||+++| |++||+|++|||+++.++++.++.++|+.. |..
T Consensus 3 ~pr~v~l~k~~~~~G~~l~~~~~~--~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~--g~~ 77 (91)
T 2vsp_A 3 KPKLCRLAKGENGYGFHLNAIRGL--PGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQSS--GKN 77 (91)
T ss_dssp CEEEEEEECBTTBTSCCCBCCTTC--SCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTTS--CSE
T ss_pred CcEEEEEEeCCCcccEEEEeccCC--CCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC--CCE
Confidence 456899999999999999886543 468999999999999999 999999999999999999999999999984 899
Q ss_pred EEEEEEeC
Q psy6910 515 VQLEVCRG 522 (1145)
Q Consensus 515 v~l~v~R~ 522 (1145)
|.|+|.|+
T Consensus 78 v~l~v~r~ 85 (91)
T 2vsp_A 78 VTLLVCGK 85 (91)
T ss_dssp EEEEEEC-
T ss_pred EEEEEEeC
Confidence 99999986
No 200
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.23 E-value=4.3e-11 Score=108.54 Aligned_cols=82 Identities=40% Similarity=0.638 Sum_probs=72.2
Q ss_pred EEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEEEEE
Q psy6910 1035 AIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVRLLI 1114 (1145)
Q Consensus 1035 ~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~L~v 1114 (1145)
++.+ ++..+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||.++.+++++++.++|+..+..+.|+|
T Consensus 5 ~v~~-~~~~~lG~~l~~~~~~-~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v 81 (87)
T 2pa1_A 5 TVDV-AGPAPWGFRITGGRDF-HTPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQL 81 (87)
T ss_dssp EEEE-CSSSCCSEEEEEEGGG-TEEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHTCCSSEEEEE
T ss_pred EEEE-CCCCccCEEEecccCC-CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence 3444 3456899999987664 5689999999999999999 99999999999999999999999999999878899999
Q ss_pred EeCCC
Q psy6910 1115 KRGGS 1119 (1145)
Q Consensus 1115 ~R~~~ 1119 (1145)
.|++.
T Consensus 82 ~R~~~ 86 (87)
T 2pa1_A 82 DRITS 86 (87)
T ss_dssp EECCC
T ss_pred EecCC
Confidence 99874
No 201
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.23 E-value=1.3e-11 Score=120.72 Aligned_cols=88 Identities=24% Similarity=0.263 Sum_probs=77.1
Q ss_pred ccceEEEEEEec--ccceeEEEecCCCC--------CCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHH
Q psy6910 433 IGERIHSSLVKS--LRGLGFTIVGGDDS--------KEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDM 502 (1145)
Q Consensus 433 ~g~~~~v~l~k~--~~glG~~i~gg~~~--------~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~ 502 (1145)
......|.|.|. ..||||+|.++.+. ...+++|.+|.++|||+++|+|++||+|++|||+++.++++.++
T Consensus 27 ~~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~ 106 (128)
T 1nf3_C 27 PETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQV 106 (128)
T ss_dssp CTTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHH
T ss_pred CCccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHH
Confidence 455678999998 47999999988641 12469999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCeEEEEEEeC
Q psy6910 503 VSVFQSISPGETVQLEVCRG 522 (1145)
Q Consensus 503 ~~~l~~~~~g~~v~l~v~R~ 522 (1145)
+.+|+. .+..|.|+|.|.
T Consensus 107 ~~~l~~--~~~~v~l~v~r~ 124 (128)
T 1nf3_C 107 TDMMIA--NSRNLIITVRPA 124 (128)
T ss_dssp HHHHHH--TTTSEEEEEECC
T ss_pred HHHHHc--CCCeEEEEEEEC
Confidence 999997 567899999886
No 202
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.23 E-value=1.4e-11 Score=118.37 Aligned_cols=88 Identities=32% Similarity=0.428 Sum_probs=77.4
Q ss_pred ccceEEEEEEecc-cceeEEEecCCCCC-----CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy6910 433 IGERIHSSLVKSL-RGLGFTIVGGDDSK-----EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVF 506 (1145)
Q Consensus 433 ~g~~~~v~l~k~~-~glG~~i~gg~~~~-----~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l 506 (1145)
..+.+.|.|.|+. .||||+|.+|.+.. ..+++|.+|.++|||+ .| |++||+|++|||+++.+++|.+++.+|
T Consensus 12 ~~~~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~~v~~~~~~~~~~~l 89 (117)
T 2csj_A 12 IWEQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPMEDVLHSFAVQQL 89 (117)
T ss_dssp EEEEEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBCBTCCHHHHHHHH
T ss_pred cceEEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-cc-CCCCCEEEEECCEECCCcCHHHHHHHH
Confidence 4567889999986 89999999997642 4579999999999996 44 999999999999999999999999999
Q ss_pred hcCCCCCeEEEEEEeCCC
Q psy6910 507 QSISPGETVQLEVCRGYP 524 (1145)
Q Consensus 507 ~~~~~g~~v~l~v~R~~~ 524 (1145)
+. .|..|.|+|.|...
T Consensus 90 ~~--~~~~v~l~v~R~~~ 105 (117)
T 2csj_A 90 RK--SGKIAAIVVKRPRK 105 (117)
T ss_dssp HH--SCSEEEEEEEEEEE
T ss_pred hc--CCCeEEEEEEECCc
Confidence 98 58899999998743
No 203
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.23 E-value=3e-11 Score=118.16 Aligned_cols=92 Identities=27% Similarity=0.451 Sum_probs=80.3
Q ss_pred CcccEEEEeecCC-cceeEEEEccCCc--ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcC-CCCHHHHHHHHHc
Q psy6910 1030 DEQYHAIELSRGT-RGFGFSIRGGREF--QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTK-NMTHAEAIEIIRN 1105 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~-~~lG~sl~gg~~~--~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~-~~s~~eav~~lk~ 1105 (1145)
....+.|.|.++. .+|||++.++.+. ...+++|..|.++|+|+++|+|++||+|++|||.++. ++++.+++.+|+.
T Consensus 23 ~~~~~~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~ 102 (128)
T 2db5_A 23 GRQIEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQ 102 (128)
T ss_dssp TCEEEEEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHH
T ss_pred cCceEEEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc
Confidence 4456788898876 5899999887643 1348999999999999999999999999999999997 9999999999999
Q ss_pred CCCeEEEEEEeCCCcC
Q psy6910 1106 GDSTVRLLIKRGGSVV 1121 (1145)
Q Consensus 1106 ~~~~v~L~v~R~~~~~ 1121 (1145)
.+..|.|+|.|+....
T Consensus 103 ~~~~v~l~v~r~~~~~ 118 (128)
T 2db5_A 103 TTGSLRLIVAREPVHT 118 (128)
T ss_dssp CCSEEEEEEEECCCSS
T ss_pred CCCeEEEEEEcCCCCC
Confidence 8889999999987543
No 204
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.23 E-value=1.1e-11 Score=119.30 Aligned_cols=87 Identities=28% Similarity=0.413 Sum_probs=78.5
Q ss_pred cceEEEEEEec-ccceeEEEecCCCCC--CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcC-CCCHHHHHHHHhcC
Q psy6910 434 GERIHSSLVKS-LRGLGFTIVGGDDSK--EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVL-GYTHHDMVSVFQSI 509 (1145)
Q Consensus 434 g~~~~v~l~k~-~~glG~~i~gg~~~~--~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~-~~~~~~~~~~l~~~ 509 (1145)
.+...|.|.|. ..||||+|.++.+.. ..+++|.+|.++|||+++|+|++||+|++|||+++. ++++.+++.+|+.
T Consensus 19 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~- 97 (117)
T 2o2t_A 19 RHVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQK- 97 (117)
T ss_dssp SCEEEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHH-
T ss_pred CeEEEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc-
Confidence 46788999998 579999999986532 357999999999999999999999999999999998 9999999999998
Q ss_pred CCCCeEEEEEEeC
Q psy6910 510 SPGETVQLEVCRG 522 (1145)
Q Consensus 510 ~~g~~v~l~v~R~ 522 (1145)
.|..|.|+|.|+
T Consensus 98 -~~~~v~l~v~R~ 109 (117)
T 2o2t_A 98 -AKDTVQLVIARG 109 (117)
T ss_dssp -CCSEEEEEEESS
T ss_pred -CCCEEEEEEEeC
Confidence 588999999987
No 205
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.23 E-value=6.4e-11 Score=114.21 Aligned_cols=92 Identities=28% Similarity=0.511 Sum_probs=78.3
Q ss_pred CcccEEEEeecC-CcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCC
Q psy6910 1030 DEQYHAIELSRG-TRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDS 1108 (1145)
Q Consensus 1030 ~~~~~~v~l~k~-~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~ 1108 (1145)
....+.+.+.+. ..+|||++.++.+....+++|..|.++|||+++|+|++||+|++|||+++.+++|.+++.+|+..++
T Consensus 13 ~~~~~~v~l~~~~~~~lG~~i~g~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~ 92 (119)
T 1x6d_A 13 LDGIHVTILHKEEGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQARE 92 (119)
T ss_dssp CTTEEEEEEECCTTSCCSEEEECCSSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTS
T ss_pred CCCeEEEEEEeCCCCccCEEEeCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 345677777774 5689999998876435689999999999999999999999999999999999999999999998766
Q ss_pred e-EEEEEEeCCCcC
Q psy6910 1109 T-VRLLIKRGGSVV 1121 (1145)
Q Consensus 1109 ~-v~L~v~R~~~~~ 1121 (1145)
. +.|++.|++...
T Consensus 93 ~~~~l~v~R~~~~~ 106 (119)
T 1x6d_A 93 PRQAVIVTRKLTPE 106 (119)
T ss_dssp SSEEEEEEECCCSS
T ss_pred CeEEEEEEcCCCcc
Confidence 5 668888877654
No 206
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.23 E-value=3.7e-11 Score=108.93 Aligned_cols=83 Identities=29% Similarity=0.576 Sum_probs=73.5
Q ss_pred ccEEEEeecCC-cceeEEEEccCCcccccEEEEEEcCCChhcc-cCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCe
Q psy6910 1032 QYHAIELSRGT-RGFGFSIRGGREFQNMALFVLQIAENGPAAL-DGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDST 1109 (1145)
Q Consensus 1032 ~~~~v~l~k~~-~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~-~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~ 1109 (1145)
+.+.+.|.+.. .+|||++.++.+. ..+++|..|.++|||++ +| |++||+|++|||.++.+++|.+++.+++..++.
T Consensus 2 ~~~~v~l~~~~~~~lG~~i~~~~~~-~~~~~V~~V~~gspA~~~ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 79 (87)
T 4e34_A 2 PIRKVLLLKEDHEGLGISITGGKEH-GVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQRGE 79 (87)
T ss_dssp CCEEEEEECCTTBCCCEEEEEEGGG-TEEEEEEEECTTSHHHHHSC-CCTTEEEEEETTEECTTCCHHHHHHHHHHCCSE
T ss_pred CEEEEEEEECCCCcccEEEEccCCC-CCCEEEEEECCCCHHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 35778888865 5899999987654 46799999999999999 57 999999999999999999999999999998888
Q ss_pred EEEEEEe
Q psy6910 1110 VRLLIKR 1116 (1145)
Q Consensus 1110 v~L~v~R 1116 (1145)
+.|+|.+
T Consensus 80 v~l~v~~ 86 (87)
T 4e34_A 80 IEFEVVY 86 (87)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9998864
No 207
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.23 E-value=9.9e-12 Score=135.43 Aligned_cols=92 Identities=27% Similarity=0.378 Sum_probs=82.9
Q ss_pred CCcCccceEEEEEEec-ccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy6910 429 PDELIGERIHSSLVKS-LRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQ 507 (1145)
Q Consensus 429 p~~~~g~~~~v~l~k~-~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~ 507 (1145)
|..+..+...|.|.|. ..||||+|.||.+. ..+++|.+|.++|||++++.|++||+||+|||++|.+++|.+++.+|+
T Consensus 71 p~~~~~~~r~V~L~k~~~~glGf~I~gg~d~-~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~ 149 (263)
T 1z87_A 71 PEALLLQRRRVTVRKADAGGLGISIKGGREN-KMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALK 149 (263)
T ss_dssp CCTTSCSSEEECCCTTTTCCCCCEEEEETTT-TEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHH
T ss_pred CCcCCCccEEEEEEeCCCCCEeEEEeeccCC-CCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHh
Confidence 4566777899999997 48999999999876 678999999999999997569999999999999999999999999999
Q ss_pred cCCCCCeEEEEEEeCC
Q psy6910 508 SISPGETVQLEVCRGY 523 (1145)
Q Consensus 508 ~~~~g~~v~l~v~R~~ 523 (1145)
. .|..|+|+|.|..
T Consensus 150 ~--~g~~V~L~V~R~~ 163 (263)
T 1z87_A 150 K--TGKEVVLEVKYMK 163 (263)
T ss_dssp H--CCSCCCEEEECCS
T ss_pred c--CCCeEEEEEEeCc
Confidence 9 5789999999864
No 208
>2l4j_A YES-associated protein 2 (YAP2); WW domain, medaka, transcription; NMR {Oryzias latipes}
Probab=99.23 E-value=6.9e-12 Score=98.02 Aligned_cols=37 Identities=57% Similarity=1.164 Sum_probs=34.1
Q ss_pred cCCCCCCCCcEEEEccCCceEeeeCCCCceeccCCcc
Q psy6910 291 LDLGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRL 327 (1145)
Q Consensus 291 ~~~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~ 327 (1145)
...++||+|||++++.+|++|||||+|++|+|+||+.
T Consensus 7 ~~~~~LP~gWe~~~~~~G~~Yyinh~t~~TtWe~Pr~ 43 (46)
T 2l4j_A 7 PASGPLPEGWEQAITPEGEIYYINHKNKTTSWLDPRL 43 (46)
T ss_dssp TTTSCCCTTCEEEECTTSCEEEEETTTTEEECSCCSS
T ss_pred CcCCCCCcCceeEECCCCCEEEEECCCCCEeCCCCCc
Confidence 3457899999999999999999999999999999985
No 209
>1i5h_W Rnedd4, ubiquitin ligase NEDD4; NEDD4, WW domains, ENAC, PY motif, liddle syndrome, proline-rich, ligase; NMR {Rattus norvegicus} SCOP: b.72.1.1 PDB: 1yiu_A 2jo9_A 2joc_A*
Probab=99.23 E-value=6.3e-12 Score=100.12 Aligned_cols=39 Identities=49% Similarity=1.044 Sum_probs=35.5
Q ss_pred ccCCCCCCCCcEEEEccCCceEeeeCCCCceeccCCcch
Q psy6910 290 ELDLGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRLC 328 (1145)
Q Consensus 290 ~~~~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~~ 328 (1145)
.+..++||+|||++++.+|++|||||+|++|+|++|+..
T Consensus 6 ~~~~~~LP~gWe~~~~~~Gr~Yy~nh~t~~T~We~Pr~~ 44 (50)
T 1i5h_W 6 SNDLGPLPPGWEERTHTDGRVFFINHNIKKTQWEDPRMQ 44 (50)
T ss_dssp SSCCSSCSTTEEEEECTTSCEEEEETTTTEEESSCTTTS
T ss_pred cccCCCCCcCcEEEEcCCCCEEEEECCCCCEEeeCCCCC
Confidence 355678999999999999999999999999999999854
No 210
>2kyk_A E3 ubiquitin-protein ligase itchy homolog; LMP2A, PY motif, WW domain; NMR {Homo sapiens}
Probab=99.23 E-value=7e-12 Score=94.86 Aligned_cols=36 Identities=42% Similarity=1.086 Sum_probs=33.5
Q ss_pred CCCCCCCCcEEEEccCCceEeeeCCCCceeccCCcc
Q psy6910 292 DLGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRL 327 (1145)
Q Consensus 292 ~~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~ 327 (1145)
..++||+|||++++.+|++||+||+|++|+|++|+.
T Consensus 3 ~~~~LP~gWe~~~d~~G~~YY~n~~t~~t~We~P~~ 38 (39)
T 2kyk_A 3 AMGPLPPGWERRVDNMGRIYYVDHFTRTTTWQRPTL 38 (39)
T ss_dssp SSCCCCSSCEEEECTTSCEEEECSSSCCEECCCCCC
T ss_pred ccCCCCCCcEEEEcCCCCEEEEECCCCCEeccCCCC
Confidence 457899999999999999999999999999999974
No 211
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=3.4e-11 Score=116.37 Aligned_cols=91 Identities=38% Similarity=0.670 Sum_probs=81.5
Q ss_pred CcccEEEEeecCCcceeEEEEccCCc----ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHc
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREF----QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRN 1105 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~----~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~ 1105 (1145)
....+.|.|.++..+|||+|.++.+. ...+++|..|.++++|+++|+|++||+|++|||+++.++++.+++.+++.
T Consensus 15 ~~~~~~v~l~r~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~ 94 (120)
T 2eno_A 15 LVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRN 94 (120)
T ss_dssp EEEEEEEEEECCSSSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHH
T ss_pred CCceEEEEEEECCCCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 34678899999989999999987653 24689999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEEEeCCCc
Q psy6910 1106 GDSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1106 ~~~~v~L~v~R~~~~ 1120 (1145)
.+..+.|+|.|+...
T Consensus 95 ~g~~v~l~v~R~~~~ 109 (120)
T 2eno_A 95 AGYAVSLRVQHRLQV 109 (120)
T ss_dssp HCSEEEEEEEEEEEC
T ss_pred CCCeEEEEEEeCCcC
Confidence 888899999997753
No 212
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.22 E-value=5.5e-11 Score=111.70 Aligned_cols=89 Identities=31% Similarity=0.612 Sum_probs=79.8
Q ss_pred CcccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCe
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDST 1109 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~ 1109 (1145)
....+.|.|.++..+|||++.++.+ ..+++|..|.++|+|+++|+|++||+|++|||.++.++++.+++.+++..+..
T Consensus 9 ~~~~~~v~l~k~~~glG~~~~~~~~--~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 86 (104)
T 3i4w_A 9 PREPRRIVIHRGSTGLGFNIVGGEX--GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQT 86 (104)
T ss_dssp CSSCEEEEEECBTTBTSEEEEECC---CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSE
T ss_pred CCccEEEEEEeCCCccCEEEECCCC--CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4567889999998899999988754 35899999999999999999999999999999999999999999999998889
Q ss_pred EEEEEEeCCCc
Q psy6910 1110 VRLLIKRGGSV 1120 (1145)
Q Consensus 1110 v~L~v~R~~~~ 1120 (1145)
+.|+|.|+.+.
T Consensus 87 v~l~v~r~~~~ 97 (104)
T 3i4w_A 87 VTIIAQYKPEE 97 (104)
T ss_dssp EEEEEEECHHH
T ss_pred EEEEEEECcch
Confidence 99999997543
No 213
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.22 E-value=4.5e-11 Score=112.31 Aligned_cols=91 Identities=40% Similarity=0.652 Sum_probs=80.7
Q ss_pred CcccEEEEeecCCcceeEEEEccCCc-ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCC
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREF-QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDS 1108 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~-~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~ 1108 (1145)
....+.+.|.++..+|||.+.++.+. ...+++|..|.+++||+++|+|++||+|++|||.++.++++.+++.+++..+.
T Consensus 9 ~~~~~~v~l~~~~~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~ 88 (104)
T 2djt_A 9 ASGHFSVELVRGYAGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGGP 88 (104)
T ss_dssp CCCCEEEEEECCSSSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHTCS
T ss_pred CCceEEEEEEeCCCCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 45678999999888999999986543 14689999999999999999999999999999999999999999999998888
Q ss_pred eEEEEEEeCCCc
Q psy6910 1109 TVRLLIKRGGSV 1120 (1145)
Q Consensus 1109 ~v~L~v~R~~~~ 1120 (1145)
.+.|+|.|++..
T Consensus 89 ~v~l~v~R~g~~ 100 (104)
T 2djt_A 89 QLHLVIRRPLSG 100 (104)
T ss_dssp EEEEEECCCCCC
T ss_pred eEEEEEEECCCC
Confidence 899999988753
No 214
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.22 E-value=1.8e-11 Score=119.90 Aligned_cols=89 Identities=31% Similarity=0.506 Sum_probs=79.3
Q ss_pred ccceEEEEEEe-cccceeEEEecCCCCC----CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy6910 433 IGERIHSSLVK-SLRGLGFTIVGGDDSK----EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQ 507 (1145)
Q Consensus 433 ~g~~~~v~l~k-~~~glG~~i~gg~~~~----~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~ 507 (1145)
..+.+.|.|.+ ...||||+|.++.+.. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++++|+
T Consensus 13 ~~~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~ 92 (129)
T 2dmz_A 13 LFETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLR 92 (129)
T ss_dssp CEEEEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHH
T ss_pred CCcEEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45778999955 6789999999976532 357999999999999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEEEEeCC
Q psy6910 508 SISPGETVQLEVCRGY 523 (1145)
Q Consensus 508 ~~~~g~~v~l~v~R~~ 523 (1145)
. .|..|.|+|.|+-
T Consensus 93 ~--~~~~v~l~v~R~~ 106 (129)
T 2dmz_A 93 N--AGQVVHLTLVRRK 106 (129)
T ss_dssp H--CCSSEEEEEEEES
T ss_pred c--CCCeEEEEEEeCC
Confidence 9 6889999999863
No 215
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.22 E-value=5.2e-11 Score=110.15 Aligned_cols=84 Identities=35% Similarity=0.651 Sum_probs=73.4
Q ss_pred ccEEEEeecCC-cceeEEEEc-------cCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy6910 1032 QYHAIELSRGT-RGFGFSIRG-------GREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEII 1103 (1145)
Q Consensus 1032 ~~~~v~l~k~~-~~lG~sl~g-------g~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~l 1103 (1145)
..++|.|.|+. .+|||++.+ +.+. ..+++|..|.++|||+++| |++||+|++|||.++.+++++++.++|
T Consensus 4 ~~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~-~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l 81 (96)
T 2ego_A 4 QRKVLTLEKGDNQTFGFEIQTYGLHHREEQRV-EMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDII 81 (96)
T ss_dssp CEEEEEEECCTTCCCSEEEEEEEC-------C-CEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred ccEEEEEEeCCCCCccEEEEeccccccCCCCC-CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 46889999987 589999986 2222 4589999999999999999 999999999999999999999999999
Q ss_pred HcCCCeEEEEEEeC
Q psy6910 1104 RNGDSTVRLLIKRG 1117 (1145)
Q Consensus 1104 k~~~~~v~L~v~R~ 1117 (1145)
+..++.+.|+|.++
T Consensus 82 ~~~~~~v~l~v~~~ 95 (96)
T 2ego_A 82 KASGNVLRLETLYG 95 (96)
T ss_dssp HHTTTEEEEEEECC
T ss_pred HhCCCeEEEEEEEC
Confidence 99888999999875
No 216
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.22 E-value=3.4e-11 Score=116.11 Aligned_cols=88 Identities=30% Similarity=0.475 Sum_probs=79.2
Q ss_pred cCccceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Q psy6910 431 ELIGERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSIS 510 (1145)
Q Consensus 431 ~~~g~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~ 510 (1145)
+...+...|.|.|...||||+|.++.+ ..+++|..|.++|||+++|+|++||+|++|||+.+.++++.+++.+++.
T Consensus 10 ~~~~~~~~v~l~k~~~glG~~l~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-- 85 (119)
T 1tp5_A 10 DIPREPRRIVIHRGSTGLGFNIVGGED--GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKN-- 85 (119)
T ss_dssp CCCCSCEEEEEECTTSCCCEEEEECGG--GCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHT--
T ss_pred CCCCccEEEEEEECCCCccEEEecCCC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--
Confidence 345567899999999999999999754 2579999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEEEeC
Q psy6910 511 PGETVQLEVCRG 522 (1145)
Q Consensus 511 ~g~~v~l~v~R~ 522 (1145)
.|..|.|+|.|+
T Consensus 86 ~~~~v~l~v~r~ 97 (119)
T 1tp5_A 86 AGQTVTIIAQYK 97 (119)
T ss_dssp SCSEEEEEEEEC
T ss_pred CCCeEEEEEEEC
Confidence 578999999886
No 217
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.21 E-value=7.8e-11 Score=112.09 Aligned_cols=88 Identities=33% Similarity=0.562 Sum_probs=79.0
Q ss_pred CcccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCe
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDST 1109 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~ 1109 (1145)
....+.+.+.+...+|||.+.++.+ .+++|..|.++|+|+++|+|++||+|++|||+++.++++.+++.+|+..+..
T Consensus 13 ~~~~~~v~l~~~~~~lG~~l~~~~~---~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~ 89 (111)
T 2dlu_A 13 WGHVEEVELINDGSGLGFGIVGGKT---SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNS 89 (111)
T ss_dssp CSEEEEEEEECCSSCCCEEEECCSS---SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHCSE
T ss_pred cCceEEEEEEeCCCccCEEEeccCC---CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 3456889999988899999987653 5899999999999999999999999999999999999999999999988888
Q ss_pred EEEEEEeCCCc
Q psy6910 1110 VRLLIKRGGSV 1120 (1145)
Q Consensus 1110 v~L~v~R~~~~ 1120 (1145)
+.|+|.|++..
T Consensus 90 v~l~v~R~~~~ 100 (111)
T 2dlu_A 90 VRMLVARDPAG 100 (111)
T ss_dssp EEEEEEESCTT
T ss_pred EEEEEEeCCCC
Confidence 99999997765
No 218
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.21 E-value=9.6e-11 Score=110.66 Aligned_cols=89 Identities=27% Similarity=0.395 Sum_probs=78.4
Q ss_pred cCccceEEEEEEecc-cceeEEEecCCCC-----CCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHH
Q psy6910 431 ELIGERIHSSLVKSL-RGLGFTIVGGDDS-----KEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVS 504 (1145)
Q Consensus 431 ~~~g~~~~v~l~k~~-~glG~~i~gg~~~-----~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~ 504 (1145)
+...+.+.|.|.|+. .||||+|.++.+. ...+++|.+|.++|||+ .| |++||+|++|||+++.++++.+++.
T Consensus 3 ~~~~~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v~~~~~~~~~~ 80 (107)
T 2h2b_A 3 HMIWEQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSMDNVEHAFAVQ 80 (107)
T ss_dssp CCCEEEEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TT-BCTTCEEEEETTEECTTCCHHHHHH
T ss_pred cccceeEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hC-CCCCCEEEEECCEECCCccHHHHHH
Confidence 346678999999985 7999999998773 24589999999999999 66 9999999999999999999999998
Q ss_pred HHhcCCCCCeEEEEEEeCC
Q psy6910 505 VFQSISPGETVQLEVCRGY 523 (1145)
Q Consensus 505 ~l~~~~~g~~v~l~v~R~~ 523 (1145)
.++. .|..|.|+|.|+-
T Consensus 81 ~~~~--~g~~v~l~v~R~~ 97 (107)
T 2h2b_A 81 QLRK--SGKNAKITIRRKK 97 (107)
T ss_dssp HHHT--CCSEEEEEEEEES
T ss_pred HhhC--CCCEEEEEEEECC
Confidence 8886 6889999999874
No 219
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.21 E-value=5.6e-11 Score=108.78 Aligned_cols=81 Identities=25% Similarity=0.355 Sum_probs=72.7
Q ss_pred eEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeE
Q psy6910 436 RIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETV 515 (1145)
Q Consensus 436 ~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v 515 (1145)
...|.|.|+..||||.+.++ .+++|.+|.++|||+++| |++||+|++|||..+.++++.+++.+|+. .+..|
T Consensus 4 ~r~v~l~~~~~g~G~~l~~~-----~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~--~~~~v 75 (91)
T 2f5y_A 4 YRQITIPRGKDGFGFTICCD-----SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRS--CPSEI 75 (91)
T ss_dssp EEEEEEECBTTBTSEEEECS-----SSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHT--CSSEE
T ss_pred eEEEEEEeCCCCccEEEecC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeE
Confidence 45789999999999999874 348999999999999999 99999999999999999999999999998 56789
Q ss_pred EEEEEeCCC
Q psy6910 516 QLEVCRGYP 524 (1145)
Q Consensus 516 ~l~v~R~~~ 524 (1145)
.|+|.|..+
T Consensus 76 ~l~v~R~~~ 84 (91)
T 2f5y_A 76 ILLVWRMVP 84 (91)
T ss_dssp EEEEEECC-
T ss_pred EEEEEeCCC
Confidence 999999753
No 220
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.21 E-value=3.4e-11 Score=115.00 Aligned_cols=90 Identities=31% Similarity=0.588 Sum_probs=79.8
Q ss_pred cccEEEEeecCCcceeEEEEc---cCCc--ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHc
Q psy6910 1031 EQYHAIELSRGTRGFGFSIRG---GREF--QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRN 1105 (1145)
Q Consensus 1031 ~~~~~v~l~k~~~~lG~sl~g---g~~~--~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~ 1105 (1145)
.+.+.|.|.++..+|||++.+ +.+. ...+++|..|.++|+|+++|+|++||+|++|||.++.++++.+++.+++.
T Consensus 3 ~~~~~v~l~k~~~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 82 (113)
T 2g5m_B 3 MELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN 82 (113)
T ss_dssp CEEEEEECCCCSSCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHH
T ss_pred eEEEEEEEEeCCCCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 356788899988899999988 3332 24689999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEEeCCCc
Q psy6910 1106 GDSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1106 ~~~~v~L~v~R~~~~ 1120 (1145)
.+..+.|+|.|++..
T Consensus 83 ~g~~v~l~v~R~~~~ 97 (113)
T 2g5m_B 83 TKGRVRFMIGRERPG 97 (113)
T ss_dssp SCSSCEEEEEECCCC
T ss_pred CCCeEEEEEEeCCCC
Confidence 888999999998764
No 221
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.21 E-value=1.5e-11 Score=112.57 Aligned_cols=85 Identities=27% Similarity=0.497 Sum_probs=73.7
Q ss_pred ccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEE
Q psy6910 1032 QYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVR 1111 (1145)
Q Consensus 1032 ~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~ 1111 (1145)
..+.|.|.|+..+|||++.+... ..+++|..|.++|||+++| |++||+|++|||+++.+++++++.++|+..+..+.
T Consensus 3 ~pr~v~l~k~~~~~G~~l~~~~~--~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 79 (91)
T 2vsp_A 3 KPKLCRLAKGENGYGFHLNAIRG--LPGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKNVT 79 (91)
T ss_dssp CEEEEEEECBTTBTSCCCBCCTT--CSCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSCSEEE
T ss_pred CcEEEEEEeCCCcccEEEEeccC--CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEE
Confidence 45889999988899999977543 3578999999999999999 99999999999999999999999999998878899
Q ss_pred EEEEeCCC
Q psy6910 1112 LLIKRGGS 1119 (1145)
Q Consensus 1112 L~v~R~~~ 1119 (1145)
|+|.|++.
T Consensus 80 l~v~r~~~ 87 (91)
T 2vsp_A 80 LLVCGKKA 87 (91)
T ss_dssp EEEEC---
T ss_pred EEEEeCCc
Confidence 99998764
No 222
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.20 E-value=3.1e-11 Score=117.73 Aligned_cols=88 Identities=27% Similarity=0.542 Sum_probs=75.6
Q ss_pred cEEEEee-cCCcceeEEEEccCCc---ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcC--
Q psy6910 1033 YHAIELS-RGTRGFGFSIRGGREF---QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNG-- 1106 (1145)
Q Consensus 1033 ~~~v~l~-k~~~~lG~sl~gg~~~---~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~-- 1106 (1145)
.+.+.|. ++..+|||+|.++.+. ...+++|..|.++|||+++|+|++||+|++|||+++.+++|.+++++|+..
T Consensus 26 ~~~v~l~k~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 105 (127)
T 1wg6_A 26 TLEIPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMS 105 (127)
T ss_dssp EEEEECSSSTTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHH
T ss_pred EEEEEEeeCCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhc
Confidence 4556666 5567999999987532 135899999999999999999999999999999999999999999999976
Q ss_pred -----CCeEEEEEEeCCCc
Q psy6910 1107 -----DSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1107 -----~~~v~L~v~R~~~~ 1120 (1145)
+..|.|+|.|+...
T Consensus 106 ~~g~~~~~v~l~v~R~~~~ 124 (127)
T 1wg6_A 106 MEGNIRGMIQLVILRRSGP 124 (127)
T ss_dssp HHHHHTCEEEEEEEECSCS
T ss_pred cccCCCCEEEEEEEeCCCC
Confidence 67899999998754
No 223
>2jmf_A E3 ubiquitin-protein ligase suppressor of deltex; WW domain, solution, complex, ligase/signaling protein complex; NMR {Drosophila melanogaster} SCOP: b.72.1.1 PDB: 2op7_A
Probab=99.20 E-value=9.9e-12 Score=99.96 Aligned_cols=37 Identities=49% Similarity=1.054 Sum_probs=34.3
Q ss_pred cCCCCCCCCcEEEEccCCceEeeeCCCCceeccCCcc
Q psy6910 291 LDLGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRL 327 (1145)
Q Consensus 291 ~~~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~ 327 (1145)
...++||+|||++++.+|++|||||+|++|+|+|||.
T Consensus 14 ~~~~~LP~GWe~~~~~~Gr~Yyinh~tk~TtW~dPr~ 50 (53)
T 2jmf_A 14 INEGPLPPGWEIRYTAAGERFFVDHNTRRTTFEDPRP 50 (53)
T ss_dssp TSCSCCCTTEEEEECTTSCEEEEETTTCCEESSCCCS
T ss_pred CcCCCCCcCcEEEEcCCCCEEEEeCCCCcEecCCCCC
Confidence 3457899999999999999999999999999999985
No 224
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.20 E-value=1.5e-10 Score=110.08 Aligned_cols=94 Identities=32% Similarity=0.571 Sum_probs=81.0
Q ss_pred CcccEEEEeecCCcceeEEEEccCCc--ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcC-
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREF--QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNG- 1106 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~--~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~- 1106 (1145)
..+.+.+.+.++..+|||++.+..+. ...+++|..|.++|+|+++|+|++||+|++|||.++.++++++++++|+..
T Consensus 9 ~~~~~~~~l~~~~~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 88 (111)
T 2koj_A 9 VGKRLNIQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTK 88 (111)
T ss_dssp SCEEEEEEEECBTTBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCC
T ss_pred cCcEEEEEEEECCCccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 45567888888888999999876532 136899999999999999999999999999999999999999999999985
Q ss_pred -CCeEEEEEEeCCCcCCC
Q psy6910 1107 -DSTVRLLIKRGGSVVAP 1123 (1145)
Q Consensus 1107 -~~~v~L~v~R~~~~~~~ 1123 (1145)
+..+.|+|.|++..+..
T Consensus 89 ~g~~v~l~v~R~~~~~~~ 106 (111)
T 2koj_A 89 MEGTVSLLVFRQEEAFHP 106 (111)
T ss_dssp CSSEEEEEEEECCCCCCC
T ss_pred CCCeEEEEEEeCCCCccc
Confidence 67899999998876544
No 225
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.20 E-value=5.6e-11 Score=109.65 Aligned_cols=86 Identities=29% Similarity=0.552 Sum_probs=75.2
Q ss_pred cccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeE
Q psy6910 1031 EQYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTV 1110 (1145)
Q Consensus 1031 ~~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v 1110 (1145)
...+.+.|.++..+|||.+.++.. ..+++|..|.++|||+++| |++||+|++|||.++.++++++++.+|+..++.+
T Consensus 4 ~~~r~v~l~~~~~~~G~~l~~~~~--~~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~ 80 (95)
T 3r68_A 4 HQPRVVVIKKGSNGYGFYLRAGPE--QKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQT 80 (95)
T ss_dssp CCCEEEEEECBTTBCSCEEEEC----CCSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEE
T ss_pred CCcEEEEEecCCCcccEEEEecCC--CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 355789999988999999987654 2489999999999999999 9999999999999999999999999999988888
Q ss_pred EEEEEeCCC
Q psy6910 1111 RLLIKRGGS 1119 (1145)
Q Consensus 1111 ~L~v~R~~~ 1119 (1145)
.+++.|.+.
T Consensus 81 ~~~~~r~~~ 89 (95)
T 3r68_A 81 TLLVLDKEL 89 (95)
T ss_dssp EEEEEECC-
T ss_pred EEEEECCcc
Confidence 888877664
No 226
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.20 E-value=5.7e-11 Score=117.67 Aligned_cols=89 Identities=29% Similarity=0.354 Sum_probs=77.1
Q ss_pred CccceEEEEEEeccc----ceeEEEecCCCC-----------CCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCC
Q psy6910 432 LIGERIHSSLVKSLR----GLGFTIVGGDDS-----------KEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLG 496 (1145)
Q Consensus 432 ~~g~~~~v~l~k~~~----glG~~i~gg~~~-----------~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~ 496 (1145)
+..+...|.|.+... +|||++.+|.+. ...+++|.+|.++|||+++| |++||+|++|||+.+.+
T Consensus 20 ~~~~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~ 98 (139)
T 2vz5_A 20 FQSMVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTM 98 (139)
T ss_dssp --CEEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTT
T ss_pred CCCceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcCC
Confidence 455667888888543 799999998762 24689999999999999999 99999999999999999
Q ss_pred CCHHHHHHHHhcCCCCCeEEEEEEeC
Q psy6910 497 YTHHDMVSVFQSISPGETVQLEVCRG 522 (1145)
Q Consensus 497 ~~~~~~~~~l~~~~~g~~v~l~v~R~ 522 (1145)
+++.+++++|+. ..|..|.|+|.|+
T Consensus 99 ~~~~~~~~~l~~-~~g~~v~l~v~R~ 123 (139)
T 2vz5_A 99 VTHDQARKRLTK-RSEEVVRLLVTRQ 123 (139)
T ss_dssp CCHHHHHHHHCC-TTCSEEEEEEEEC
T ss_pred CCHHHHHHHHHh-CCCCEEEEEEEEC
Confidence 999999999998 5689999999997
No 227
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.20 E-value=8.4e-11 Score=110.47 Aligned_cols=87 Identities=21% Similarity=0.495 Sum_probs=77.7
Q ss_pred CcccEEEEeecCC-cceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCC
Q psy6910 1030 DEQYHAIELSRGT-RGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDS 1108 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~-~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~ 1108 (1145)
....+.|.|.+.. .+|||++.++.+. ..+++|..|.++++|+++| |++||+|++|||..+.++++++++++|+. +.
T Consensus 13 ~~~~~~v~l~k~~~~~lG~~~~~~~~~-~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~ 89 (104)
T 1wi2_A 13 QFLPRIVTLKKPPGAQLGFNIRGGKAS-QLGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILKT-AR 89 (104)
T ss_dssp SSCCEEEEECCCTTCCCSEEEECCSSS-CCCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHHH-SS
T ss_pred CCCCEEEEEEeCCCCCccEEEEcccCC-CCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC-CC
Confidence 3456889999876 6899999987654 5689999999999999999 99999999999999999999999999998 67
Q ss_pred eEEEEEEeCCC
Q psy6910 1109 TVRLLIKRGGS 1119 (1145)
Q Consensus 1109 ~v~L~v~R~~~ 1119 (1145)
.+.|+|+|+..
T Consensus 90 ~v~l~v~r~~~ 100 (104)
T 1wi2_A 90 EISMRVRFFSG 100 (104)
T ss_dssp SEEEEEECCCC
T ss_pred EEEEEEEECCC
Confidence 89999998765
No 228
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.20 E-value=9.5e-11 Score=110.70 Aligned_cols=89 Identities=26% Similarity=0.484 Sum_probs=77.0
Q ss_pred cccEEEEeecCCcceeEEEEccCCcc-----------cccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHH
Q psy6910 1031 EQYHAIELSRGTRGFGFSIRGGREFQ-----------NMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEA 1099 (1145)
Q Consensus 1031 ~~~~~v~l~k~~~~lG~sl~gg~~~~-----------~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~ea 1099 (1145)
...+.|.|.|...+|||++.++.+.. ...++|..|.++|||+++| |++||+|++|||.++.+++++++
T Consensus 5 ~~~r~v~l~k~~~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~ 83 (107)
T 3qe1_A 5 GSPRVVRIVKSESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATHKQV 83 (107)
T ss_dssp -CCEEEEEECBTTBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred CCcEEEEEEECCCCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 45688999998889999998874321 1234699999999999999 99999999999999999999999
Q ss_pred HHHHHcCCCeEEEEEEeCCCc
Q psy6910 1100 IEIIRNGDSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1100 v~~lk~~~~~v~L~v~R~~~~ 1120 (1145)
+.+|+..+..+.|+|.|....
T Consensus 84 ~~~l~~~g~~v~l~v~r~~~~ 104 (107)
T 3qe1_A 84 VDLIRAGEKELILTVLSVESE 104 (107)
T ss_dssp HHHHHHCSSEEEEEEECSSCC
T ss_pred HHHHHcCCCEEEEEEEcCCCC
Confidence 999999888999999987754
No 229
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.20 E-value=1.1e-10 Score=106.65 Aligned_cols=85 Identities=26% Similarity=0.523 Sum_probs=75.4
Q ss_pred CcccEEEEeecCC--cceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCC
Q psy6910 1030 DEQYHAIELSRGT--RGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGD 1107 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~--~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~ 1107 (1145)
..+.+.+.|.+.. .+|||++.++.. ..+++|..|.++|+|+++| |++||+|++|||.++.++++.+++.+++..+
T Consensus 4 ~~~~~~v~l~k~~~~~~~G~~~~~~~~--~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 80 (91)
T 1m5z_A 4 PVELHKVTLYKDSGMEDFGFSVADGLL--EKGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLIAESG 80 (91)
T ss_dssp CCEEEEEEEECCTTCSSSSEEEEECTT--SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTST
T ss_pred CcceEEEEEEECCCCCCccEEEEeccC--CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 4567888998864 479999988654 3689999999999999999 9999999999999999999999999999888
Q ss_pred CeEEEEEEeC
Q psy6910 1108 STVRLLIKRG 1117 (1145)
Q Consensus 1108 ~~v~L~v~R~ 1117 (1145)
..+.|+|.|+
T Consensus 81 ~~v~l~v~R~ 90 (91)
T 1m5z_A 81 NKLDLVISRN 90 (91)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEEeC
Confidence 8899999886
No 230
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.20 E-value=4.3e-11 Score=110.41 Aligned_cols=83 Identities=28% Similarity=0.418 Sum_probs=72.7
Q ss_pred ceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCe
Q psy6910 435 ERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGET 514 (1145)
Q Consensus 435 ~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~ 514 (1145)
+...+.|.|+..||||++.++.+. .+++|..|.++|||+++| |++||+|++|||..+.+++|.+++.+|+. .+..
T Consensus 5 ~~r~v~l~~~~~~~G~~l~~~~~~--~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~--~~~~ 79 (95)
T 3r68_A 5 QPRVVVIKKGSNGYGFYLRAGPEQ--KGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRK--GGDQ 79 (95)
T ss_dssp CCEEEEEECBTTBCSCEEEEC--C--CSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHT--TTTE
T ss_pred CcEEEEEecCCCcccEEEEecCCC--CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCe
Confidence 346789999999999999987553 469999999999999999 99999999999999999999999999999 5677
Q ss_pred EEEEEEeC
Q psy6910 515 VQLEVCRG 522 (1145)
Q Consensus 515 v~l~v~R~ 522 (1145)
+.+++.|.
T Consensus 80 ~~~~~~r~ 87 (95)
T 3r68_A 80 TTLLVLDK 87 (95)
T ss_dssp EEEEEEEC
T ss_pred EEEEEECC
Confidence 88877665
No 231
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.20 E-value=9.2e-11 Score=111.97 Aligned_cols=83 Identities=18% Similarity=0.217 Sum_probs=74.1
Q ss_pred ceEEEEEEeccc-ceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCC
Q psy6910 435 ERIHSSLVKSLR-GLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGE 513 (1145)
Q Consensus 435 ~~~~v~l~k~~~-glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~ 513 (1145)
....|.|.|... ||||++.++. .+++|..|.++|||+++|.|++||+|++|||+.+.++++.+++++|+. .+.
T Consensus 25 ~~~~v~l~k~~~~~lG~~i~~~~----~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~--~~~ 98 (113)
T 1va8_A 25 TVKIVRIEKARDIPLGATVRNEM----DSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSD--MHG 98 (113)
T ss_dssp ECEEEEEEECTTCCCCEEEEECS----SSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHH--CCE
T ss_pred ceEEEEEEeCCCCceeEEEEeCC----CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCC
Confidence 567799999887 9999998873 459999999999999999669999999999999999999999999998 456
Q ss_pred eEEEEEEeCC
Q psy6910 514 TVQLEVCRGY 523 (1145)
Q Consensus 514 ~v~l~v~R~~ 523 (1145)
.|.|+|.|..
T Consensus 99 ~v~l~v~r~~ 108 (113)
T 1va8_A 99 TLTFVLIPSS 108 (113)
T ss_dssp EEEEEEECCC
T ss_pred eEEEEEEECC
Confidence 8999998863
No 232
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.20 E-value=3.2e-11 Score=111.16 Aligned_cols=82 Identities=27% Similarity=0.355 Sum_probs=73.8
Q ss_pred eEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeE
Q psy6910 436 RIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETV 515 (1145)
Q Consensus 436 ~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v 515 (1145)
.+.|.| ++..+|||++.+|.+. ..+++|..|.+++||+++| |++||+|++|||+.+.++++.+++.+++. .|..|
T Consensus 9 ~~~v~l-~~~~~~G~~l~gg~~~-~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~--~g~~v 83 (94)
T 2eeg_A 9 PHSVTL-RGPSPWGFRLVGGRDF-SAPLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIKG--CHDHL 83 (94)
T ss_dssp CEEEEE-CCSSCCSCCEECCTTT-TSCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHHT--CCSCE
T ss_pred eEEEEE-eCCCccCEEEECccCC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeE
Confidence 456777 4557999999999876 6679999999999999999 99999999999999999999999999998 57899
Q ss_pred EEEEEeC
Q psy6910 516 QLEVCRG 522 (1145)
Q Consensus 516 ~l~v~R~ 522 (1145)
.|+|.|+
T Consensus 84 ~l~v~R~ 90 (94)
T 2eeg_A 84 TLSVSSG 90 (94)
T ss_dssp EEEEECC
T ss_pred EEEEEeC
Confidence 9999886
No 233
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.20 E-value=9.6e-11 Score=112.58 Aligned_cols=91 Identities=31% Similarity=0.519 Sum_probs=80.5
Q ss_pred CcccEEEEeecCC-cceeEEEEccCCcc--------cccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHH
Q psy6910 1030 DEQYHAIELSRGT-RGFGFSIRGGREFQ--------NMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAI 1100 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~-~~lG~sl~gg~~~~--------~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav 1100 (1145)
....+.|.|.+.. .+|||+|.++.+.. ..+++|..|.++|+|+++|+|++||+|++|||.++.++++.+++
T Consensus 13 ~~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 92 (117)
T 2ehr_A 13 WGPPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAV 92 (117)
T ss_dssp BCCCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHH
T ss_pred CCCCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 4567899999875 68999999886531 36899999999999999999999999999999999999999999
Q ss_pred HHHHcCCCeEEEEEEeCCCc
Q psy6910 1101 EIIRNGDSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1101 ~~lk~~~~~v~L~v~R~~~~ 1120 (1145)
.+|+..+..+.|+|.|....
T Consensus 93 ~~~~~~g~~v~l~v~r~~~~ 112 (117)
T 2ehr_A 93 EAIKNAGNPVVFIVQSLSST 112 (117)
T ss_dssp HHHHTSCSSEEEEECCBSCC
T ss_pred HHHHcCCCeEEEEEEECCCC
Confidence 99999888999999887654
No 234
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.19 E-value=1.7e-11 Score=116.75 Aligned_cols=92 Identities=26% Similarity=0.476 Sum_probs=80.1
Q ss_pred CcccEEEEeecCC-cceeEEEEccCCc--------ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHH
Q psy6910 1030 DEQYHAIELSRGT-RGFGFSIRGGREF--------QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAI 1100 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~-~~lG~sl~gg~~~--------~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav 1100 (1145)
....+.|.|.++. .+|||++.++.+. ...+++|..|.++|+|+++|+|++||+|++|||+++.++++.+++
T Consensus 7 ~~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 86 (111)
T 1uju_A 7 GPGLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAV 86 (111)
T ss_dssp SCSSSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHH
T ss_pred CCccEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 3456778888876 6999999988631 245899999999999999999999999999999999999999999
Q ss_pred HHHHcCCCeEEEEEEeCCCcC
Q psy6910 1101 EIIRNGDSTVRLLIKRGGSVV 1121 (1145)
Q Consensus 1101 ~~lk~~~~~v~L~v~R~~~~~ 1121 (1145)
.+|+..+..+.|+|.|+....
T Consensus 87 ~~l~~~g~~v~l~v~r~~~~~ 107 (111)
T 1uju_A 87 QLLRSVGDTLTVLVCDGFESG 107 (111)
T ss_dssp HHHSSCSSEEEECCCCCCCCS
T ss_pred HHHHcCCCeEEEEEEECCCCC
Confidence 999998888999999877543
No 235
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.19 E-value=4.3e-11 Score=111.14 Aligned_cols=83 Identities=33% Similarity=0.410 Sum_probs=74.0
Q ss_pred eEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeE
Q psy6910 436 RIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETV 515 (1145)
Q Consensus 436 ~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v 515 (1145)
...+.|.++..||||++.++.+. .+++|..|.++|||+++| |++||+|++|||+.+.++++.++.++|+.. .|..+
T Consensus 10 ~~~~~l~~~~~g~G~~~~~~~~~--~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~~~ 85 (98)
T 2jxo_A 10 PRLCTMKKGPSGYGFNLHSDKSK--PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAG-GDETK 85 (98)
T ss_dssp CEEEEEECTTTCCCEEEECCCSS--SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTT-TTEEE
T ss_pred cEEEEEEeCCCcccEEEEecCCC--CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCcEE
Confidence 35678999999999999987643 479999999999999999 999999999999999999999999999997 57778
Q ss_pred EEEEEeC
Q psy6910 516 QLEVCRG 522 (1145)
Q Consensus 516 ~l~v~R~ 522 (1145)
.|+|.|+
T Consensus 86 ~l~v~R~ 92 (98)
T 2jxo_A 86 LLVVDRE 92 (98)
T ss_dssp EEECCHH
T ss_pred EEEEECC
Confidence 8888775
No 236
>1wr3_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus}
Probab=99.19 E-value=1.1e-11 Score=92.04 Aligned_cols=34 Identities=38% Similarity=1.007 Sum_probs=32.2
Q ss_pred CCCCCCcEEEEccCCceEeeeCCCCceeccCCcc
Q psy6910 294 GPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRL 327 (1145)
Q Consensus 294 ~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~ 327 (1145)
.+||+|||++++.+|++||+||+|++|+|++|++
T Consensus 3 ~~LP~GWe~~~d~~G~~Yy~n~~t~~t~We~P~l 36 (36)
T 1wr3_A 3 PPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSL 36 (36)
T ss_dssp SCSCTTEEEEECSSSCEEEEETTTCCEESSCSCC
T ss_pred CCCCCCCEEEECCCCCEEEEECCCCCEeeeCcCC
Confidence 5799999999999999999999999999999973
No 237
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.19 E-value=8.5e-11 Score=110.01 Aligned_cols=88 Identities=27% Similarity=0.531 Sum_probs=78.2
Q ss_pred CcccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCe
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDST 1109 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~ 1109 (1145)
....+.|.|.++..+|||.+.+..+ ..+++|..|.++|||+++| |++||+|++|||.++.++++++++++|+..+..
T Consensus 4 ~~~~r~v~l~k~~~g~G~~l~~~~~--~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 80 (102)
T 2d90_A 4 GSSGRVVVIKKGSNGYGFYLRAGPE--QKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQ 80 (102)
T ss_dssp CSSSEEEEEECCSSSSSCEEEECSS--SSSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHHHSTTE
T ss_pred CCCCEEEEEeeCCCCccEEEEeecC--CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 3456899999998999999987543 4589999999999999999 999999999999999999999999999988889
Q ss_pred EEEEEEeCCCc
Q psy6910 1110 VRLLIKRGGSV 1120 (1145)
Q Consensus 1110 v~L~v~R~~~~ 1120 (1145)
+.|+|.|.++.
T Consensus 81 v~l~v~r~~~~ 91 (102)
T 2d90_A 81 TTLLVLDKEAE 91 (102)
T ss_dssp EEEEECSTTCC
T ss_pred EEEEEEECCCc
Confidence 99999886543
No 238
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.19 E-value=1.6e-11 Score=115.19 Aligned_cols=93 Identities=53% Similarity=0.992 Sum_probs=81.4
Q ss_pred CcccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCe
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDST 1109 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~ 1109 (1145)
....+.+.+.+...+|||.+.++.+. ..+++|..|.++|+|+++|+|++||+|++|||+++.++++.+++.+++..+..
T Consensus 9 ~~~~~~v~l~~~~~g~G~~~~~~~~~-~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~ 87 (103)
T 1wfv_A 9 DFDYFTVDMEKGAKGFGFSIRGGREY-KMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRR 87 (103)
T ss_dssp CSCCEECCEECCTTSSSBCCEEETTT-TEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHCSE
T ss_pred CceEEEEEEecCCCcCCEEEeccccC-CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 34567788888878899999987654 45899999999999999999999999999999999999999999999977888
Q ss_pred EEEEEEeCCCcCCC
Q psy6910 1110 VRLLIKRGGSVVAP 1123 (1145)
Q Consensus 1110 v~L~v~R~~~~~~~ 1123 (1145)
+.|+|.|++..++.
T Consensus 88 v~l~v~R~~~~~~~ 101 (103)
T 1wfv_A 88 VRLLLKRGTGSGPS 101 (103)
T ss_dssp ECEEEECTTCSSCC
T ss_pred EEEEEEECCCCCCC
Confidence 99999998876543
No 239
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.19 E-value=6e-11 Score=109.28 Aligned_cols=85 Identities=35% Similarity=0.525 Sum_probs=75.5
Q ss_pred ccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEE
Q psy6910 1032 QYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVR 1111 (1145)
Q Consensus 1032 ~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~ 1111 (1145)
..+.|.+. +..+|||.+.++.+. ..+++|..|.+++||+++| |++||+|++|||+++.++++.+++.+++..+..+.
T Consensus 8 ~~~~v~l~-~~~~~G~~l~gg~~~-~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~ 84 (94)
T 2eeg_A 8 MPHSVTLR-GPSPWGFRLVGGRDF-SAPLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIKGCHDHLT 84 (94)
T ss_dssp CCEEEEEC-CSSCCSCCEECCTTT-TSCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHHTCCSCEE
T ss_pred ceEEEEEe-CCCccCEEEECccCC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 45777784 457899999998765 5689999999999999999 99999999999999999999999999998888899
Q ss_pred EEEEeCCC
Q psy6910 1112 LLIKRGGS 1119 (1145)
Q Consensus 1112 L~v~R~~~ 1119 (1145)
|+|.|++.
T Consensus 85 l~v~R~g~ 92 (94)
T 2eeg_A 85 LSVSSGPS 92 (94)
T ss_dssp EEEECCSS
T ss_pred EEEEeCCC
Confidence 99999764
No 240
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.19 E-value=8.1e-11 Score=111.38 Aligned_cols=91 Identities=29% Similarity=0.547 Sum_probs=79.0
Q ss_pred CcccEEEEe--ecCCcceeEEEEccCCc----ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy6910 1030 DEQYHAIEL--SRGTRGFGFSIRGGREF----QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEII 1103 (1145)
Q Consensus 1030 ~~~~~~v~l--~k~~~~lG~sl~gg~~~----~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~l 1103 (1145)
..+.+.+.+ .+...+|||++.++.+. ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|
T Consensus 10 ~~~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l 89 (108)
T 2jre_A 10 GFSLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVL 89 (108)
T ss_dssp SCEEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHH
T ss_pred CcEEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 456778888 45667999999987542 245899999999999999999999999999999999999999999999
Q ss_pred HcCCCeEEEEEEeCCCc
Q psy6910 1104 RNGDSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1104 k~~~~~v~L~v~R~~~~ 1120 (1145)
+..+..+.|+|.|++..
T Consensus 90 ~~~g~~v~l~v~R~~~~ 106 (108)
T 2jre_A 90 RNAGNPVRLLLIRRLPL 106 (108)
T ss_dssp HHHCSEEEEEEEECCCC
T ss_pred HcCCCeEEEEEEeCCcC
Confidence 98778899999998754
No 241
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.19 E-value=2.1e-11 Score=109.52 Aligned_cols=79 Identities=24% Similarity=0.412 Sum_probs=71.9
Q ss_pred eEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeE
Q psy6910 436 RIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETV 515 (1145)
Q Consensus 436 ~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v 515 (1145)
...|.|.|+..||||++.++ .+++|.+|.++|||+++| |++||+|++|||.++.+++|.+++.+|+. .+..|
T Consensus 3 ~r~v~l~~~~~g~G~~~~~~-----~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~--~~~~v 74 (83)
T 2kv8_A 3 VRSVEVARGRAGYGFTLSGQ-----APCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGK--CSGVL 74 (83)
T ss_dssp EEEEEECCCSSCCSCBCCCS-----SSCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTT--CSSCE
T ss_pred cEEEEEEeCCCcccEEEEcC-----CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCeE
Confidence 46799999999999998774 259999999999999999 99999999999999999999999999987 46789
Q ss_pred EEEEEeC
Q psy6910 516 QLEVCRG 522 (1145)
Q Consensus 516 ~l~v~R~ 522 (1145)
.|+|.|+
T Consensus 75 ~l~v~R~ 81 (83)
T 2kv8_A 75 HMVIAEG 81 (83)
T ss_dssp EEEEECC
T ss_pred EEEEEcC
Confidence 9999986
No 242
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=99.19 E-value=2.4e-12 Score=152.53 Aligned_cols=154 Identities=23% Similarity=0.278 Sum_probs=50.0
Q ss_pred CCceEEEeCCCCcccccCCCCCCCEEEEECCeeecccCHHHHHHHHHc--CCCEEEEEEeCCCCCCCCCCCcccCccCCC
Q psy6910 944 AGSTIGRIIEDSPADRSGELHLGDHILAVNHVDIMSLHHGEIVNLIKD--SGYCVTLTIGAPISGDDASSTTSVSAASHR 1021 (1145)
Q Consensus 944 ~g~~I~~v~~gs~A~~~G~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~~~~v~L~v~r~~~~~~~~~~~s~~~~~~~ 1021 (1145)
.+++|..|.++|||+++| |+.||+|++|||+.+.++ .++..++.. .++.+.|+|.|............ ..
T Consensus 286 ~G~~V~~V~~gspA~~AG-L~~GDvI~~inG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~-----~~ 357 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAG-IKAGDVITSLNGKPISSF--AALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQ-----QS 357 (448)
T ss_dssp CSEECCCCTTCSSSTTTT-CCTTCEECBSSSSBCCSS--HHHHHHTTSSBTTCCCEEEEESSSCEEECCCC---------
T ss_pred CceEEEEeccCCHHHHcC-CCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEEe-----cC
Confidence 478899999999999999 999999999999999876 455555653 57889999987532211110000 00
Q ss_pred CCCCCCCCCcccEEEEeec-CCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHH
Q psy6910 1022 EYEEGGEHDEQYHAIELSR-GTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAI 1100 (1145)
Q Consensus 1022 ~~p~~~~~~~~~~~v~l~k-~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav 1100 (1145)
+. ..+.... ...-+|+.+.... ...+++|..|.++++|+++| |++||+|++|||+.+. +++++.
T Consensus 358 ~~----------~~~~~~~~~~~~~G~~l~~~~--~~~gv~V~~V~~gspA~~aG-L~~GDiI~~vng~~v~--~~~~l~ 422 (448)
T 1ky9_A 358 SQ----------NQVDSSSIFNGIEGAEMSNKG--KDQGVVVNNVKTGTPAAQIG-LKKGDVIIGANQQAVK--NIAELR 422 (448)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CC----------cccccccccccccceEeeccC--CCCeEEEEEecCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHH
Confidence 00 0000000 0112477664221 14578999999999999999 9999999999999998 778999
Q ss_pred HHHHcCCCeEEEEEEeCCCc
Q psy6910 1101 EIIRNGDSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1101 ~~lk~~~~~v~L~v~R~~~~ 1120 (1145)
++|+..++.+.|+|.|++..
T Consensus 423 ~~l~~~~~~v~l~v~R~g~~ 442 (448)
T 1ky9_A 423 KVLDSKPSVLALNIQRGDST 442 (448)
T ss_dssp --------------------
T ss_pred HHHHcCCCeEEEEEEECCEE
Confidence 99998767899999998764
No 243
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.19 E-value=2.4e-11 Score=109.23 Aligned_cols=81 Identities=27% Similarity=0.613 Sum_probs=73.3
Q ss_pred ccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEE
Q psy6910 1032 QYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVR 1111 (1145)
Q Consensus 1032 ~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~ 1111 (1145)
..++|.|.++..+|||.+.+. .+++|..|.++|+|+++| |++||+|++|||.++.++++.+++++|+..++.+.
T Consensus 2 ~~r~v~l~~~~~g~G~~~~~~-----~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~ 75 (83)
T 2kv8_A 2 RVRSVEVARGRAGYGFTLSGQ-----APCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGKCSGVLH 75 (83)
T ss_dssp CEEEEEECCCSSCCSCBCCCS-----SSCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTTCSSCEE
T ss_pred CcEEEEEEeCCCcccEEEEcC-----CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 357899999988999988663 478999999999999999 99999999999999999999999999998878899
Q ss_pred EEEEeCC
Q psy6910 1112 LLIKRGG 1118 (1145)
Q Consensus 1112 L~v~R~~ 1118 (1145)
|+|.|+.
T Consensus 76 l~v~R~~ 82 (83)
T 2kv8_A 76 MVIAEGV 82 (83)
T ss_dssp EEEECCC
T ss_pred EEEEcCC
Confidence 9999875
No 244
>2ysb_A Salvador homolog 1 protein; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: k.22.1.1
Probab=99.19 E-value=1.4e-11 Score=97.45 Aligned_cols=35 Identities=43% Similarity=0.905 Sum_probs=32.9
Q ss_pred CCCCCCCcEEEEccCCceEeeeCCCCceeccCCcc
Q psy6910 293 LGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRL 327 (1145)
Q Consensus 293 ~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~ 327 (1145)
..+||+|||++++.+|++|||||+|++|+|++|+.
T Consensus 9 ~~~LP~gWe~~~~~~Gr~Yy~nh~t~~T~W~~P~~ 43 (49)
T 2ysb_A 9 DLPLPPGWSVDWTMRGRKYYIDHNTNTTHWSHPLE 43 (49)
T ss_dssp CCCCCTTEEEEECSSSCEEEEETTTTEEESSCTTT
T ss_pred CCCCCCCceEEECCCCCEEEEEcCCCCEEecCCCC
Confidence 45799999999999999999999999999999975
No 245
>2yse_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI-1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.19 E-value=8.8e-12 Score=102.36 Aligned_cols=41 Identities=24% Similarity=0.344 Sum_probs=37.1
Q ss_pred cccCCCCCCCCcEEEEccCCceEeeeCCCCceeccCCcchh
Q psy6910 289 LELDLGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRLCK 329 (1145)
Q Consensus 289 ~~~~~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~~~ 329 (1145)
..+...+||+|||++++.+|++|||||+|++|+|++|+...
T Consensus 7 ~~d~~~~LP~GWE~~~d~~Gr~YYvnh~tk~T~We~P~~~~ 47 (60)
T 2yse_A 7 GLDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEA 47 (60)
T ss_dssp CCCCCSSCCSSEEEEECSSSCEEEEETTTTEEESSCHHHHH
T ss_pred ccCCCCCCCCCcEEEECCCCCEEEEeCCCCCeeccCCCchh
Confidence 45667899999999999999999999999999999999753
No 246
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.18 E-value=2.6e-11 Score=115.73 Aligned_cols=90 Identities=31% Similarity=0.474 Sum_probs=80.6
Q ss_pred CCcCccceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy6910 429 PDELIGERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQS 508 (1145)
Q Consensus 429 p~~~~g~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~ 508 (1145)
+.....+...|.|.|...||||+|.++.+ ..+++|..|.+++||+++|+|++||+|++|||+.+.++++.+++.+++.
T Consensus 9 ~~~~~~~~~~v~l~k~~~glG~~l~~~~~--~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~ 86 (113)
T 1um7_A 9 PGGDAREPRKIILHKGSTGLGFNIVGGED--GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKR 86 (113)
T ss_dssp CCCCCCSEEEEEEECCSSCSSBCCBCCST--TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHS
T ss_pred CCcCCCceEEEEEEECCCcccEEEEeccC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 34445678899999999999999998864 3579999999999999999999999999999999999999999999997
Q ss_pred CCCCCeEEEEEEeC
Q psy6910 509 ISPGETVQLEVCRG 522 (1145)
Q Consensus 509 ~~~g~~v~l~v~R~ 522 (1145)
.+..|.|+|.|+
T Consensus 87 --~~~~v~l~v~r~ 98 (113)
T 1um7_A 87 --AGQSVTIVAQYR 98 (113)
T ss_dssp --CCSEEEEEEECC
T ss_pred --CCCcEEEEEEEC
Confidence 578999999886
No 247
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.18 E-value=5.5e-11 Score=108.81 Aligned_cols=81 Identities=30% Similarity=0.421 Sum_probs=72.7
Q ss_pred EEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEE
Q psy6910 437 IHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQ 516 (1145)
Q Consensus 437 ~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~ 516 (1145)
+.+.+. +..+|||++.+|.+. ..+++|.+|.++|||+++| |++||+|++|||+.+.++++.++..+|+. .|..|.
T Consensus 5 ~~v~~~-~~~~~G~~l~~~~~~-~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~ 79 (91)
T 2pkt_A 5 QQIDLQ-GPGPWGFRLVGGKDF-EQPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKG--CTDNLT 79 (91)
T ss_dssp EEEEEE-SSSCCSEEEEEEGGG-TEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHT--CSSEEE
T ss_pred EEEEEC-CCCCCCEEEEccCCC-CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEE
Confidence 455555 457899999998765 5679999999999999999 99999999999999999999999999999 689999
Q ss_pred EEEEeC
Q psy6910 517 LEVCRG 522 (1145)
Q Consensus 517 l~v~R~ 522 (1145)
|+|.|+
T Consensus 80 l~v~R~ 85 (91)
T 2pkt_A 80 LTVARS 85 (91)
T ss_dssp EEEEEE
T ss_pred EEEEEC
Confidence 999987
No 248
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.18 E-value=4.6e-11 Score=110.40 Aligned_cols=81 Identities=14% Similarity=0.217 Sum_probs=72.0
Q ss_pred EEEEEEecc-cceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeE
Q psy6910 437 IHSSLVKSL-RGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETV 515 (1145)
Q Consensus 437 ~~v~l~k~~-~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v 515 (1145)
..|.|.|.. .+|||+|..+.+ .+++|.+|.++|||+++|+|++||+|++|||.++.++++++++++|+. .+..|
T Consensus 14 ~~v~l~K~~~~~lG~~l~~~~~---~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~--~~~~v 88 (97)
T 2ejy_A 14 RLIQFEKVTEEPMGICLKLNEK---QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKE--TKGMI 88 (97)
T ss_dssp EEEEEEECSSSCCSEEEEECTT---CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHH--CCEEE
T ss_pred EEEEEEeCCCCCeeEEEEeCCC---CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeE
Confidence 578888865 689999987543 379999999999999999999999999999999999999999999998 46799
Q ss_pred EEEEEeC
Q psy6910 516 QLEVCRG 522 (1145)
Q Consensus 516 ~l~v~R~ 522 (1145)
.|+|.+.
T Consensus 89 ~L~V~~~ 95 (97)
T 2ejy_A 89 SLKVIPN 95 (97)
T ss_dssp EEEEECC
T ss_pred EEEEEEC
Confidence 9999764
No 249
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.18 E-value=6.2e-11 Score=111.18 Aligned_cols=88 Identities=27% Similarity=0.591 Sum_probs=78.0
Q ss_pred cccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeE
Q psy6910 1031 EQYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTV 1110 (1145)
Q Consensus 1031 ~~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v 1110 (1145)
.+.++|.|. +..+|||++.++.+. ..+++|..|.++|+|+++| |++||+|++|||.++.++++.+++.+++..+..+
T Consensus 4 g~~~~v~l~-~~~~~G~~l~gg~~~-~~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v 80 (103)
T 1wf7_A 4 GSSGSVSLV-GPAPWGFRLQGGKDF-NMPLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSL 80 (103)
T ss_dssp CCCEEEEEE-SSSCCSCCEEEETTT-TEEEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHHCSSEE
T ss_pred CCEEEEEEe-CCCccCEEEeccccC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 456778887 557899999988765 5679999999999999999 9999999999999999999999999999888889
Q ss_pred EEEEEeCCCcC
Q psy6910 1111 RLLIKRGGSVV 1121 (1145)
Q Consensus 1111 ~L~v~R~~~~~ 1121 (1145)
.|+|.|++...
T Consensus 81 ~l~v~R~g~~~ 91 (103)
T 1wf7_A 81 NMTLQRASAAA 91 (103)
T ss_dssp EEEECCCSCCC
T ss_pred EEEEEeCCCcC
Confidence 99999987643
No 250
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.18 E-value=1.4e-10 Score=110.83 Aligned_cols=97 Identities=28% Similarity=0.439 Sum_probs=80.9
Q ss_pred CcccEEEEeecC-CcceeEEEEccCCcc------cccEEEEEEcCCChhcc-cCCCCCCCEEEEECCEEcCCCCHHHHHH
Q psy6910 1030 DEQYHAIELSRG-TRGFGFSIRGGREFQ------NMALFVLQIAENGPAAL-DGHLKVGDEIVEINGINTKNMTHAEAIE 1101 (1145)
Q Consensus 1030 ~~~~~~v~l~k~-~~~lG~sl~gg~~~~------~~~v~V~~V~~gg~A~~-~G~L~~GD~Il~ING~~v~~~s~~eav~ 1101 (1145)
..+.+.|.+.+. ..+|||+|.++.+.. ..+++|..|.++|+|++ +| |++||+|++|||.++.+++|+++++
T Consensus 8 ~~~~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~~v~~~~~~~~~~ 86 (114)
T 1uew_A 8 SLQTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAK-LKVGDRILAVNGQSIINMPHADIVK 86 (114)
T ss_dssp CCCCEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSS-CCTTCBEEEETTBCTTTSCHHHHHH
T ss_pred cccceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCC-CCCCCEEEEECCEECCCCCHHHHHH
Confidence 345688888874 468999998865321 23679999999999999 88 9999999999999999999999999
Q ss_pred HHHcCCCeEEEEEEeCCCcCCCCCCC
Q psy6910 1102 IIRNGDSTVRLLIKRGGSVVAPTDNA 1127 (1145)
Q Consensus 1102 ~lk~~~~~v~L~v~R~~~~~~~~~~~ 1127 (1145)
+|+..+..+.|+|.|++........+
T Consensus 87 ~l~~~g~~v~l~v~r~~~~~~~~~p~ 112 (114)
T 1uew_A 87 LIKDAGLSVTLRIIPQEELNSPSGPS 112 (114)
T ss_dssp HHHHTTTEEEEEECCCSCCCCCCCSS
T ss_pred HHHcCCCeEEEEEEeCCcCCCCCCCC
Confidence 99998888999999988765554443
No 251
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.18 E-value=6.5e-11 Score=114.16 Aligned_cols=88 Identities=27% Similarity=0.495 Sum_probs=77.4
Q ss_pred CcccEEEEeecCCc-ceeEEEEccCCcccccEEEEEEcCCChhccc--CCCCCCCEEEEECCEEcCCCCHHHHHHHHHcC
Q psy6910 1030 DEQYHAIELSRGTR-GFGFSIRGGREFQNMALFVLQIAENGPAALD--GHLKVGDEIVEINGINTKNMTHAEAIEIIRNG 1106 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~-~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~--G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~ 1106 (1145)
....+.|.+.++.. +|||++.++.+. ..+++|..|.++|+|+++ | |++||+|++|||+++.+++|.+++.+|+..
T Consensus 13 ~~~~~~v~l~k~~~~~~G~~l~gg~~~-~~~v~V~~V~~~spA~~a~gG-L~~GD~Il~ing~~v~~~~~~~~~~~~~~~ 90 (119)
T 2cs5_A 13 HDNLVLIRMKPDENGRFGFNVKGGYDQ-KMPVIVSRVAPGTPADLCVPR-LNEGDQVVLINGRDIAEHTHDQVVLFIKAS 90 (119)
T ss_dssp SSCCEEEEECCCSSSCCSEEEEEEGGG-TEEEEEEEECSSSTTTSSSSC-CCTTCEEEEETTBCTTSSCHHHHHHHHHHH
T ss_pred CCCeEEEEEEeCCCCCcCEEEecccCC-CCCeEEEEECCCCHHHHhhcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 44578899999765 599999988765 568999999999999999 7 999999999999999999999999999987
Q ss_pred C----CeEEEEEEeCCC
Q psy6910 1107 D----STVRLLIKRGGS 1119 (1145)
Q Consensus 1107 ~----~~v~L~v~R~~~ 1119 (1145)
+ .++.|+|.|+..
T Consensus 91 ~~~~~~~v~l~v~R~~~ 107 (119)
T 2cs5_A 91 CERHSGELMLLVRPNAV 107 (119)
T ss_dssp HHCCSSCEEEEEECCCC
T ss_pred cccCCCEEEEEEEcccc
Confidence 4 479999999764
No 252
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.18 E-value=1.4e-10 Score=106.56 Aligned_cols=82 Identities=29% Similarity=0.485 Sum_probs=73.6
Q ss_pred ccceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Q psy6910 433 IGERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPG 512 (1145)
Q Consensus 433 ~g~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g 512 (1145)
.+....|.|.|+..||||++.+. .+++|..|.+++||+++| |++||+|++|||+.+.++++.+++.+++. |
T Consensus 6 ~~~~r~v~l~~~~~~~G~~l~~~-----~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~---g 76 (93)
T 2dls_A 6 SGVQRCVIIQKDQHGFGFTVSGD-----RIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIKS---G 76 (93)
T ss_dssp CCCEEEEEEECSSSSCCEEEECS-----SSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHTS---S
T ss_pred CCCCEEEEEEeCCCceeEEEeCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC---C
Confidence 34567899999999999999863 359999999999999999 99999999999999999999999999874 8
Q ss_pred CeEEEEEEeCC
Q psy6910 513 ETVQLEVCRGY 523 (1145)
Q Consensus 513 ~~v~l~v~R~~ 523 (1145)
..|.|+|.|+.
T Consensus 77 ~~v~l~v~R~~ 87 (93)
T 2dls_A 77 AYVALTLLGSS 87 (93)
T ss_dssp SEEEEEEECCC
T ss_pred CEEEEEEEECC
Confidence 89999999974
No 253
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.18 E-value=7.7e-11 Score=115.15 Aligned_cols=91 Identities=21% Similarity=0.408 Sum_probs=79.4
Q ss_pred CCcccEEEEeecCC--cceeEEEEccCCc--------ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHH
Q psy6910 1029 HDEQYHAIELSRGT--RGFGFSIRGGREF--------QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAE 1098 (1145)
Q Consensus 1029 ~~~~~~~v~l~k~~--~~lG~sl~gg~~~--------~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~e 1098 (1145)
.....+.|.|.+.. .+|||++.++.+. ...+++|..|.++|+|+++|+|++||+|++|||.++.++++++
T Consensus 26 ~~~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~ 105 (128)
T 1nf3_C 26 LPETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQ 105 (128)
T ss_dssp SCTTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHH
T ss_pred CCCccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH
Confidence 34567889999984 6899999877531 1247999999999999999989999999999999999999999
Q ss_pred HHHHHHcCCCeEEEEEEeCCC
Q psy6910 1099 AIEIIRNGDSTVRLLIKRGGS 1119 (1145)
Q Consensus 1099 av~~lk~~~~~v~L~v~R~~~ 1119 (1145)
++.+|+..+..+.|+|.|++.
T Consensus 106 ~~~~l~~~~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 106 VTDMMIANSRNLIITVRPANQ 126 (128)
T ss_dssp HHHHHHHTTTSEEEEEECCCC
T ss_pred HHHHHHcCCCeEEEEEEECCc
Confidence 999999888889999999774
No 254
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.18 E-value=1.5e-10 Score=107.15 Aligned_cols=88 Identities=32% Similarity=0.632 Sum_probs=77.5
Q ss_pred ccEEEEeecCCcceeEEEEccCCc-----ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcC
Q psy6910 1032 QYHAIELSRGTRGFGFSIRGGREF-----QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNG 1106 (1145)
Q Consensus 1032 ~~~~v~l~k~~~~lG~sl~gg~~~-----~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~ 1106 (1145)
+.+.+.+.+...+|||++.++.+. ...+++|..|.++|||+++| |++||+|++|||.++.++++.+++..++..
T Consensus 3 ~~~~v~~~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 81 (97)
T 2w4f_A 3 EELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRGA 81 (97)
T ss_dssp CEEEEEEECBTTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTS
T ss_pred eEEEEEEEeCCCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhCC
Confidence 346788888888999999986542 25689999999999999999 999999999999999999999999999888
Q ss_pred CCeEEEEEEeCCCc
Q psy6910 1107 DSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1107 ~~~v~L~v~R~~~~ 1120 (1145)
+..+.|+|.|++..
T Consensus 82 g~~v~l~v~R~g~~ 95 (97)
T 2w4f_A 82 GTAVQMRVWRERET 95 (97)
T ss_dssp CSEEEEEEECCSSC
T ss_pred CCeEEEEEEeCCcc
Confidence 88999999998764
No 255
>1wr7_A NEDD4-2; all-beta, ligase; NMR {Mus musculus}
Probab=99.17 E-value=1.6e-11 Score=93.92 Aligned_cols=35 Identities=49% Similarity=0.994 Sum_probs=32.8
Q ss_pred CCCCCCCcEEEEccCCceEeeeCCCCceeccCCcc
Q psy6910 293 LGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRL 327 (1145)
Q Consensus 293 ~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~ 327 (1145)
..+||+|||++++.+|++|||||+|++|+|++||+
T Consensus 6 ~~~LP~gWe~~~~~~G~~Yy~n~~t~~t~We~Pr~ 40 (41)
T 1wr7_A 6 QSFLPPGWEMRIAPNGRPFFIDHNTKTTTWEDPRL 40 (41)
T ss_dssp CCSSCTTEEEEECTTSCEEEEETTTTEEESSCGGG
T ss_pred cCCCCCCcEEEEcCCCCEEEEECCCCCeecCCCCC
Confidence 35799999999999999999999999999999974
No 256
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.17 E-value=1.2e-10 Score=109.34 Aligned_cols=83 Identities=31% Similarity=0.401 Sum_probs=71.4
Q ss_pred EEEEEeccc----ceeEEEecCCCC-----------CCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHH
Q psy6910 438 HSSLVKSLR----GLGFTIVGGDDS-----------KEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDM 502 (1145)
Q Consensus 438 ~v~l~k~~~----glG~~i~gg~~~-----------~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~ 502 (1145)
.+.+.+... +|||++.||.+. ...+++|.+|.++|||+++| |++||+|++|||.++.+.+|.++
T Consensus 7 ~i~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~ 85 (104)
T 3sfj_A 7 RVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQA 85 (104)
T ss_dssp EEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred EEEEEEccCCCCCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 455665432 699999988763 24579999999999999999 99999999999999999999999
Q ss_pred HHHHhcCCCCCeEEEEEEeC
Q psy6910 503 VSVFQSISPGETVQLEVCRG 522 (1145)
Q Consensus 503 ~~~l~~~~~g~~v~l~v~R~ 522 (1145)
+.+|+. ..|..|.|+|.|+
T Consensus 86 ~~~l~~-~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 86 RKRLTK-RSEEVVRLLVTRQ 104 (104)
T ss_dssp HHHHTC-TTCSEEEEEEEEC
T ss_pred HHHHHh-CCCCEEEEEEEcC
Confidence 999987 4688999999884
No 257
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.17 E-value=1.3e-10 Score=106.28 Aligned_cols=84 Identities=35% Similarity=0.570 Sum_probs=73.7
Q ss_pred EEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEEEE
Q psy6910 1034 HAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVRLL 1113 (1145)
Q Consensus 1034 ~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~L~ 1113 (1145)
+.+.+. +..+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||.++.++++.++..+|+..+..+.|+
T Consensus 5 ~~v~~~-~~~~~G~~l~~~~~~-~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~ 81 (91)
T 2pkt_A 5 QQIDLQ-GPGPWGFRLVGGKDF-EQPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTLT 81 (91)
T ss_dssp EEEEEE-SSSCCSEEEEEEGGG-TEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEE
T ss_pred EEEEEC-CCCCCCEEEEccCCC-CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 455555 346899999987654 4689999999999999999 9999999999999999999999999999977889999
Q ss_pred EEeCCCc
Q psy6910 1114 IKRGGSV 1120 (1145)
Q Consensus 1114 v~R~~~~ 1120 (1145)
|.|++..
T Consensus 82 v~R~g~~ 88 (91)
T 2pkt_A 82 VARSEHE 88 (91)
T ss_dssp EEEECCC
T ss_pred EEECCcc
Confidence 9998764
No 258
>2kpz_A E3 ubiquitin-protein ligase NEDD4; WW domain, HTLV1, NEDD4, human modular domain, complex, HOST interaction, ligase; NMR {Homo sapiens} PDB: 2kq0_A 2laj_A*
Probab=99.17 E-value=1.5e-11 Score=97.80 Aligned_cols=37 Identities=46% Similarity=0.956 Sum_probs=32.0
Q ss_pred cCCCCCCCCcEEEEccCCceEeeeCCCCceeccCCcc
Q psy6910 291 LDLGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRL 327 (1145)
Q Consensus 291 ~~~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~ 327 (1145)
...++||+|||++++.+|++|||||+|++|+|++|+.
T Consensus 8 ~~~~~LP~gWe~~~~~~G~~Yy~nh~T~~ttWe~Pr~ 44 (49)
T 2kpz_A 8 IEQGFLPKGWEVRHAPNGRPFFIDHNTKTTTWEDPRL 44 (49)
T ss_dssp ----CCCTTEEEEECTTSCEEEEETTTTEEESSCTTC
T ss_pred ccCCCCCCCcEEEECCCCCEEEEECCCCCEecCCCCC
Confidence 3457899999999999999999999999999999985
No 259
>1wmv_A WWOX, WW domain containing oxidoreductase; all-beta, apoptosis; NMR {Homo sapiens}
Probab=99.17 E-value=2.1e-11 Score=98.53 Aligned_cols=38 Identities=42% Similarity=0.851 Sum_probs=34.9
Q ss_pred cCCCCCCCCcEEEEccCCceEeeeCCCCceeccCCcch
Q psy6910 291 LDLGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRLC 328 (1145)
Q Consensus 291 ~~~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~~ 328 (1145)
...++||+|||++++.+|++|||||+|++|+|+|||..
T Consensus 7 ~~~~~LP~GWe~~~~~~G~~Yyinh~tk~TtwedPr~~ 44 (54)
T 1wmv_A 7 RVAGDLPYGWEQETDENGQVFFVDHINKRTTYLDPRLA 44 (54)
T ss_dssp CCSSCSCTTEEEEECTTSCEEEEESSSCCEESSCTTSS
T ss_pred CcCCCCCcCcEEEECCCCCEEEEeCCCCCEeecCCCCc
Confidence 45678999999999999999999999999999999864
No 260
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.17 E-value=2.2e-10 Score=105.20 Aligned_cols=83 Identities=27% Similarity=0.528 Sum_probs=74.4
Q ss_pred CcccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCe
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDST 1109 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~ 1109 (1145)
....+.|.|.++..+|||.+.+ ..+++|..|.+++||+++| |++||+|++|||+++.++++.+++..++ .+..
T Consensus 6 ~~~~r~v~l~~~~~~~G~~l~~-----~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~-~g~~ 78 (93)
T 2dls_A 6 SGVQRCVIIQKDQHGFGFTVSG-----DRIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIK-SGAY 78 (93)
T ss_dssp CCCEEEEEEECSSSSCCEEEEC-----SSSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHT-SSSE
T ss_pred CCCCEEEEEEeCCCceeEEEeC-----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhc-CCCE
Confidence 4456889999998899999976 3479999999999999999 9999999999999999999999999988 5788
Q ss_pred EEEEEEeCCC
Q psy6910 1110 VRLLIKRGGS 1119 (1145)
Q Consensus 1110 v~L~v~R~~~ 1119 (1145)
+.|+|.|++.
T Consensus 79 v~l~v~R~~~ 88 (93)
T 2dls_A 79 VALTLLGSSS 88 (93)
T ss_dssp EEEEEECCCC
T ss_pred EEEEEEECCC
Confidence 9999999764
No 261
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.16 E-value=8e-11 Score=107.04 Aligned_cols=77 Identities=23% Similarity=0.352 Sum_probs=67.5
Q ss_pred EEEEEEec--ccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCe
Q psy6910 437 IHSSLVKS--LRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGET 514 (1145)
Q Consensus 437 ~~v~l~k~--~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~ 514 (1145)
+.+.|.+. ..+|||.+.+ +++|.+|.++|||+++|+|++||+|++|||+++.++++++++++|++ .+..
T Consensus 2 l~v~l~~~~~~~~~G~~~~~-------gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~--~~~~ 72 (88)
T 3e17_A 2 IGVLLMKSRANEEYGLRLGS-------QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEK--SRGK 72 (88)
T ss_dssp EEEEEECBTTBCCCCEEEEE-------EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHH--TTTE
T ss_pred eEEEEEeCCCCCCCCEEEeC-------CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCe
Confidence 34566663 3579999976 49999999999999999999999999999999999999999999999 4569
Q ss_pred EEEEEEeC
Q psy6910 515 VQLEVCRG 522 (1145)
Q Consensus 515 v~l~v~R~ 522 (1145)
|.|++.+.
T Consensus 73 v~L~v~~~ 80 (88)
T 3e17_A 73 LQLVVLRD 80 (88)
T ss_dssp EEEEECCC
T ss_pred EEEEEeCC
Confidence 99999765
No 262
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.16 E-value=1.3e-10 Score=114.05 Aligned_cols=104 Identities=18% Similarity=0.294 Sum_probs=85.6
Q ss_pred CCccccccccCCCccccceEeEEEeCCCCCCCceeeeccccCCC------------ceEEEEecCCccccccCCCCCCcE
Q psy6910 4 RPNKLDNLTAGGTHWQDKETPVTLTVPPDGSLNFSVGGGSDSGE------------FAYVTNINKEKVKGAEKYLEEKAI 71 (1145)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~i~gg~e~g~------------~~~v~~i~~~~~~~~sg~l~~GD~ 71 (1145)
-.|++-+.-.....+..+.++|.|.|...+.|||+|.||.+... -++|..|..|+.|++.| |.+||+
T Consensus 10 ~~~~~~~~~~~~s~~~~~~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~ 88 (132)
T 3l4f_D 10 HSQDPLVPRGSGSDYIIKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDF 88 (132)
T ss_dssp ---------CCSCCCCCCCCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCE
T ss_pred hhcCCCccCCCCCCcCCCCEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCE
Confidence 34555555566667788899999999888999999999976432 37999999999999999 999999
Q ss_pred EEeeCCEEecCCCHHHHHHHHHhhcCCCCcEEEEEecCCc
Q psy6910 72 ILEIQGQKVAGYTRRDTIAWLNHCCRSGKTLTLRTVSSAY 111 (1145)
Q Consensus 72 i~evng~~v~g~~~~~~~~~l~~~~~~~~~v~~~~~p~~~ 111 (1145)
|++|||++|.+++..++..+|+++ ...|+|+|++...
T Consensus 89 Il~Vng~~v~~~~~~~~~~~l~~~---g~~v~l~v~~~~~ 125 (132)
T 3l4f_D 89 LIEVNGQNVVKVGHRQVVNMIRQG---GNTLMVKVVMVTR 125 (132)
T ss_dssp EEEESSSBCTTSCHHHHHHHHHHT---TTEEEEEEECCCC
T ss_pred EEEECCEECCCCCHHHHHHHHHcC---CCEEEEEEEECCC
Confidence 999999999999999999999998 8899999998655
No 263
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.16 E-value=1.3e-10 Score=108.38 Aligned_cols=88 Identities=25% Similarity=0.237 Sum_probs=77.2
Q ss_pred ccceEEEEEEecccc-eeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy6910 433 IGERIHSSLVKSLRG-LGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISP 511 (1145)
Q Consensus 433 ~g~~~~v~l~k~~~g-lG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~ 511 (1145)
....+.|.|.|...+ |||++.++.+. ..+++|.+|.+++||+++| |++||+|++|||+.+.++++.+++.+++.
T Consensus 8 ~~~~~~v~l~~~~~~~lG~~~~~~~~~-~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~--- 82 (100)
T 2eeh_A 8 SDIIHSVRVEKSPAGRLGFSVRGGSEH-GLGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVLTS--- 82 (100)
T ss_dssp CCEECCEEECCCSSSSCSEEEECCTTT-TCCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHHHHS---
T ss_pred CCeEEEEEEEECCCCCccEEEEccccC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC---
Confidence 345677899998765 99999998654 4679999999999999999 99999999999999999999999999987
Q ss_pred CCeEEEEEEeCCCC
Q psy6910 512 GETVQLEVCRGYPL 525 (1145)
Q Consensus 512 g~~v~l~v~R~~~~ 525 (1145)
|..|.|+|.|+-..
T Consensus 83 ~~~v~l~v~R~g~~ 96 (100)
T 2eeh_A 83 SSRLHMMVRRMGSG 96 (100)
T ss_dssp CSSEEEEEEECSCC
T ss_pred CCEEEEEEEECCcC
Confidence 68999999997543
No 264
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.16 E-value=6e-11 Score=111.07 Aligned_cols=83 Identities=28% Similarity=0.418 Sum_probs=75.1
Q ss_pred ceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCe
Q psy6910 435 ERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGET 514 (1145)
Q Consensus 435 ~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~ 514 (1145)
....|.|.|+..||||++.++.+ ..+++|.+|.++|||+++| |++||+|++|||+.+.++++.+++++|+. .|..
T Consensus 6 ~~r~v~l~k~~~g~G~~l~~~~~--~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~ 80 (102)
T 2d90_A 6 SGRVVVIKKGSNGYGFYLRAGPE--QKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRK--GGDQ 80 (102)
T ss_dssp SSEEEEEECCSSSSSCEEEECSS--SSSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHHH--STTE
T ss_pred CCEEEEEeeCCCCccEEEEeecC--CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCE
Confidence 45789999999999999998643 3579999999999999999 99999999999999999999999999998 5889
Q ss_pred EEEEEEeC
Q psy6910 515 VQLEVCRG 522 (1145)
Q Consensus 515 v~l~v~R~ 522 (1145)
|.|+|.|.
T Consensus 81 v~l~v~r~ 88 (102)
T 2d90_A 81 TTLLVLDK 88 (102)
T ss_dssp EEEEECST
T ss_pred EEEEEEEC
Confidence 99999775
No 265
>1tk7_A CG4244-PB; WW domain, notch, signaling protein; NMR {Drosophila melanogaster} SCOP: b.72.1.1 b.72.1.1
Probab=99.16 E-value=1.2e-11 Score=111.89 Aligned_cols=72 Identities=21% Similarity=0.313 Sum_probs=58.9
Q ss_pred CCCCCCCceeeeCCCCceEEEeCCCceeeCcCCccccccCCCCCCCCCCCCCCCc-ccCCCCcccCCCCCCCccc
Q psy6910 339 DDELPYGWERIDDPAYGTYYIDHVNKQTQYENPVLQAKHRDQGAGPSEMDDNEHK-VKDSPGKRIAPQARNTLVS 412 (1145)
Q Consensus 339 ~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~~~~~~~~~~~~~~~p~~w~-~~~~~g~~~~~~h~~~~~s 412 (1145)
..+||+|||++.+.+|++||+||.|++|+|++|+...... ......+||.||+ ..+..|+.||+||....++
T Consensus 10 ~~~LP~gWe~~~~~~Gr~Yy~n~~t~~t~W~~P~~~~~~~--~~~~~~~LP~gWe~~~~~~G~~Yy~nh~t~~tt 82 (88)
T 1tk7_A 10 LGPLPDGWEKKIQSDNRVYFVNHKNRTTQWEDPRTQGQEV--SLINEGPLPPGWEIRYTAAGERFFVDHNTRRTT 82 (88)
T ss_dssp TSSSSSSCCEEEETTTEEEEEETTTTEEEEESCCCTTTCC--HHHHSCSSCSSCEEEEETTTEEEEEETTTTEEE
T ss_pred cCCCCCCcEEEECCCCCEEEEECCCCCeEeeccccccccc--ccccccccCCceEEEECCCCCEEEEECCCCcEe
Confidence 4589999999999999999999999999999998753211 0012468999999 7788999999999876654
No 266
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.16 E-value=1.3e-10 Score=110.26 Aligned_cols=87 Identities=26% Similarity=0.381 Sum_probs=74.8
Q ss_pred ceEEEEEEe-cccceeEEEecCCCCC-----------CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHH
Q psy6910 435 ERIHSSLVK-SLRGLGFTIVGGDDSK-----------EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDM 502 (1145)
Q Consensus 435 ~~~~v~l~k-~~~glG~~i~gg~~~~-----------~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~ 502 (1145)
+...+.|.+ ...||||+|.++.+.. ..+++|..|.++|||+++| |++||+|++|||+.+.+++|.++
T Consensus 7 ~~~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~ 85 (109)
T 1q3o_A 7 KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQV 85 (109)
T ss_dssp EEEEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred CcEEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 456778875 5679999999987631 1269999999999999999 99999999999999999999999
Q ss_pred HHHHhcCCCCCeEEEEEEeCCC
Q psy6910 503 VSVFQSISPGETVQLEVCRGYP 524 (1145)
Q Consensus 503 ~~~l~~~~~g~~v~l~v~R~~~ 524 (1145)
+.+|+. .|..|.|+|.|..+
T Consensus 86 ~~~l~~--~~~~v~l~v~~~~~ 105 (109)
T 1q3o_A 86 VNMIRQ--GGNTLMVKVVMVTR 105 (109)
T ss_dssp HHHHHH--TTTEEEEEEEEEEC
T ss_pred HHHHHh--CCCEEEEEEEECCC
Confidence 999998 47899999988643
No 267
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.16 E-value=1.1e-10 Score=111.42 Aligned_cols=85 Identities=27% Similarity=0.381 Sum_probs=73.7
Q ss_pred ceEEEEEEecccc-eeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCC
Q psy6910 435 ERIHSSLVKSLRG-LGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGE 513 (1145)
Q Consensus 435 ~~~~v~l~k~~~g-lG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~ 513 (1145)
....|.|.++..| |||++.++.+. ..+++|.+|.++|||+++|+|++||+|++|||.++.+.++.+++++|+.. +.
T Consensus 24 ~~~~V~l~~~~~~~lG~~l~~~~~~-~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~--~~ 100 (114)
T 2gzv_A 24 VPGKVTLQKDAQNLIGISIGGGAQY-CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV--KG 100 (114)
T ss_dssp CCEEEEEECCTTSCCSEEEEECCC---CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC--CS
T ss_pred CCEEEEEEECCCCcEeEEEEeCCCC-CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--CC
Confidence 3468899998765 99999998765 56799999999999999999999999999999999999999999999983 45
Q ss_pred eEEEEEEeC
Q psy6910 514 TVQLEVCRG 522 (1145)
Q Consensus 514 ~v~l~v~R~ 522 (1145)
.|.|+|.+.
T Consensus 101 ~v~l~v~~~ 109 (114)
T 2gzv_A 101 EVTIHYNKL 109 (114)
T ss_dssp EEEEEEECC
T ss_pred eEEEEEEec
Confidence 799998653
No 268
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=2.7e-10 Score=108.17 Aligned_cols=90 Identities=32% Similarity=0.640 Sum_probs=79.8
Q ss_pred CcccEEEEeecCCcceeEEEEccCCc-----ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHH
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREF-----QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIR 1104 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~-----~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk 1104 (1145)
..+.+.+.+.+...+|||++.++.+. ...+++|..|.++|||+++| |++||+|++|||+.+.++++.+++..++
T Consensus 13 ~~~~~~~~l~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~ 91 (110)
T 1x5q_A 13 EEEELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALR 91 (110)
T ss_dssp CCEEEEEEEECSSSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CcceEEEEEecCCCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHhh
Confidence 45667888888888999999977542 25689999999999999999 9999999999999999999999999999
Q ss_pred cCCCeEEEEEEeCCCc
Q psy6910 1105 NGDSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1105 ~~~~~v~L~v~R~~~~ 1120 (1145)
..+..+.|+|.|++..
T Consensus 92 ~~g~~v~l~v~R~g~~ 107 (110)
T 1x5q_A 92 GAGTAVQMRVWRESGP 107 (110)
T ss_dssp SCCSEEEEEEEECSSC
T ss_pred CCCCeEEEEEEECCcc
Confidence 8888999999998864
No 269
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.16 E-value=1.8e-10 Score=106.31 Aligned_cols=83 Identities=30% Similarity=0.520 Sum_probs=72.8
Q ss_pred cEEEEeecCCcceeEEEEccCCc-------ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHc
Q psy6910 1033 YHAIELSRGTRGFGFSIRGGREF-------QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRN 1105 (1145)
Q Consensus 1033 ~~~v~l~k~~~~lG~sl~gg~~~-------~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~ 1105 (1145)
.+++.+.++. +|||++.++.+. ...+++|..|.++|||++ | |++||+|++|||.++.++++.+++.+++.
T Consensus 4 ~~~v~l~~~~-~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (95)
T 1mfg_A 4 EIRVRVEKDP-ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKT 80 (95)
T ss_dssp EEEEEEECSS-SCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCBHHHHHHHHHH
T ss_pred EEEEEECCCC-CCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-C-CCCCCEEEEECCEEcCCCCHHHHHHHhhc
Confidence 3567777765 899999987631 246899999999999999 8 99999999999999999999999999998
Q ss_pred CCCeEEEEEEeCC
Q psy6910 1106 GDSTVRLLIKRGG 1118 (1145)
Q Consensus 1106 ~~~~v~L~v~R~~ 1118 (1145)
.+..+.|+|.|+.
T Consensus 81 ~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 81 FQNTVELIIVREV 93 (95)
T ss_dssp CCSEEEEEEEEEC
T ss_pred CCCeEEEEEEeCC
Confidence 8889999999865
No 270
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.15 E-value=2.9e-10 Score=108.54 Aligned_cols=87 Identities=21% Similarity=0.415 Sum_probs=77.2
Q ss_pred CcccEEEEeecCCc-ceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCC
Q psy6910 1030 DEQYHAIELSRGTR-GFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDS 1108 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~-~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~ 1108 (1145)
....+.|.+.+... +|||.+... ..+++|..|.++|+|+++|.|++||+|++|||+.+.++++++++++|+..++
T Consensus 23 ~~~~~~v~l~k~~~~~lG~~i~~~----~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~ 98 (113)
T 1va8_A 23 GETVKIVRIEKARDIPLGATVRNE----MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHG 98 (113)
T ss_dssp TEECEEEEEEECTTCCCCEEEEEC----SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCE
T ss_pred CCceEEEEEEeCCCCceeEEEEeC----CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 34678899999887 999999875 4579999999999999999339999999999999999999999999998888
Q ss_pred eEEEEEEeCCCc
Q psy6910 1109 TVRLLIKRGGSV 1120 (1145)
Q Consensus 1109 ~v~L~v~R~~~~ 1120 (1145)
.+.|+|.|.+..
T Consensus 99 ~v~l~v~r~~~~ 110 (113)
T 1va8_A 99 TLTFVLIPSSGP 110 (113)
T ss_dssp EEEEEEECCCCC
T ss_pred eEEEEEEECCcc
Confidence 899999988763
No 271
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.15 E-value=6.4e-11 Score=113.84 Aligned_cols=90 Identities=37% Similarity=0.568 Sum_probs=78.9
Q ss_pred cccEEEEeecCC-cceeEEEEccCCc--ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcC-CCCHHHHHHHHHcC
Q psy6910 1031 EQYHAIELSRGT-RGFGFSIRGGREF--QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTK-NMTHAEAIEIIRNG 1106 (1145)
Q Consensus 1031 ~~~~~v~l~k~~-~~lG~sl~gg~~~--~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~-~~s~~eav~~lk~~ 1106 (1145)
...+.|.|.+.. .+|||++.++.+. ...+++|..|.++|+|+++|+|++||+|++|||.++. ++++.+++.+|+..
T Consensus 19 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~~ 98 (117)
T 2o2t_A 19 RHVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQKA 98 (117)
T ss_dssp SCEEEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHHC
T ss_pred CeEEEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcC
Confidence 456888888874 6899999887532 1458999999999999999999999999999999998 99999999999998
Q ss_pred CCeEEEEEEeCCCc
Q psy6910 1107 DSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1107 ~~~v~L~v~R~~~~ 1120 (1145)
+..+.|+|.|++..
T Consensus 99 ~~~v~l~v~R~~~~ 112 (117)
T 2o2t_A 99 KDTVQLVIARGSLP 112 (117)
T ss_dssp CSEEEEEEESSCCG
T ss_pred CCEEEEEEEeCCcc
Confidence 88999999998764
No 272
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.14 E-value=1.2e-10 Score=112.00 Aligned_cols=89 Identities=25% Similarity=0.487 Sum_probs=77.8
Q ss_pred CcccEEEEeecCC-cceeEEEEccCCc-----ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy6910 1030 DEQYHAIELSRGT-RGFGFSIRGGREF-----QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEII 1103 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~-~~lG~sl~gg~~~-----~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~l 1103 (1145)
..+.+.|.|.++. .+|||+|.++.+. ...+++|..|.++|+|+ +| |++||+|++|||+++.++++.+++.+|
T Consensus 12 ~~~~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~~v~~~~~~~~~~~l 89 (117)
T 2csj_A 12 IWEQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPMEDVLHSFAVQQL 89 (117)
T ss_dssp EEEEEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBCBTCCHHHHHHHH
T ss_pred cceEEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-cc-CCCCCEEEEECCEECCCcCHHHHHHHH
Confidence 3456788899886 7999999988653 24579999999999997 77 999999999999999999999999999
Q ss_pred HcCCCeEEEEEEeCCCc
Q psy6910 1104 RNGDSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1104 k~~~~~v~L~v~R~~~~ 1120 (1145)
+..+..+.|+|.|....
T Consensus 90 ~~~~~~v~l~v~R~~~~ 106 (117)
T 2csj_A 90 RKSGKIAAIVVKRPRKV 106 (117)
T ss_dssp HHSCSEEEEEEEEEEEC
T ss_pred hcCCCeEEEEEEECCcc
Confidence 99888999999987654
No 273
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.14 E-value=1.3e-10 Score=108.13 Aligned_cols=84 Identities=24% Similarity=0.445 Sum_probs=72.4
Q ss_pred EEEeecCCcceeEEEEccCCc------ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCC
Q psy6910 1035 AIELSRGTRGFGFSIRGGREF------QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDS 1108 (1145)
Q Consensus 1035 ~v~l~k~~~~lG~sl~gg~~~------~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~ 1108 (1145)
++.+.++..+|||++...... ...+++|..|.++|||+++| |++||+|++|||.++.++++.+++.+|+..+.
T Consensus 5 ~v~l~~~~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 83 (99)
T 3khf_A 5 PIVIHSSGKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLKSGN 83 (99)
T ss_dssp CEEEEC-CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHSCS
T ss_pred CEEEEeCCCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCC
Confidence 467778888999999865421 12367899999999999999 99999999999999999999999999998889
Q ss_pred eEEEEEEeCCC
Q psy6910 1109 TVRLLIKRGGS 1119 (1145)
Q Consensus 1109 ~v~L~v~R~~~ 1119 (1145)
.+.|++.|++.
T Consensus 84 ~v~l~v~r~~~ 94 (99)
T 3khf_A 84 KISLRTTALEN 94 (99)
T ss_dssp EEEEEEECSCS
T ss_pred EEEEEEEECCC
Confidence 99999999765
No 274
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.14 E-value=2.5e-10 Score=107.49 Aligned_cols=83 Identities=14% Similarity=0.324 Sum_probs=73.4
Q ss_pred cEEEEeec-CCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEE
Q psy6910 1033 YHAIELSR-GTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVR 1111 (1145)
Q Consensus 1033 ~~~v~l~k-~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~ 1111 (1145)
.++|+|.+ ...+|||++.+. ..+++|..|.++|+|+++|+|++||+|++|||+++.++++.+++.+++..++.+.
T Consensus 3 ~~~v~L~k~~~~glG~~i~~~----~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~ 78 (106)
T 2la8_A 3 KFNVDLMKKAGKELGLSLSPN----EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVS 78 (106)
T ss_dssp EEEEEECCBSSSTTCCEEEEC----SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBSCEE
T ss_pred EEEEEEEeCCCCccCEEEEeC----CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEE
Confidence 46788874 456899998772 4589999999999999999999999999999999999999999999999888899
Q ss_pred EEEEeCCC
Q psy6910 1112 LLIKRGGS 1119 (1145)
Q Consensus 1112 L~v~R~~~ 1119 (1145)
|+|.|...
T Consensus 79 l~v~R~~~ 86 (106)
T 2la8_A 79 MEVTRPKP 86 (106)
T ss_dssp EEEEECCS
T ss_pred EEEEeCCC
Confidence 99999653
No 275
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.13 E-value=8.8e-11 Score=109.25 Aligned_cols=82 Identities=24% Similarity=0.337 Sum_probs=71.3
Q ss_pred EEEEEecccceeEEEecCCCCC------CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy6910 438 HSSLVKSLRGLGFTIVGGDDSK------EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISP 511 (1145)
Q Consensus 438 ~v~l~k~~~glG~~i~gg~~~~------~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~ 511 (1145)
.+.|.++..||||+|.++.... ..+++|..|.++|||+++| |++||+|++|||..+.++++.+++.+|+. .
T Consensus 5 ~v~l~~~~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~--~ 81 (99)
T 3khf_A 5 PIVIHSSGKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLK--S 81 (99)
T ss_dssp CEEEEC-CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHH--S
T ss_pred CEEEEeCCCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhc--C
Confidence 4778889999999999764321 1257899999999999999 99999999999999999999999999996 6
Q ss_pred CCeEEEEEEeC
Q psy6910 512 GETVQLEVCRG 522 (1145)
Q Consensus 512 g~~v~l~v~R~ 522 (1145)
|+.|.|+|.|.
T Consensus 82 g~~v~l~v~r~ 92 (99)
T 3khf_A 82 GNKISLRTTAL 92 (99)
T ss_dssp CSEEEEEEECS
T ss_pred CCEEEEEEEEC
Confidence 89999999985
No 276
>1wr4_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus} PDB: 2lb2_A*
Probab=99.13 E-value=3.6e-11 Score=89.52 Aligned_cols=33 Identities=36% Similarity=0.871 Sum_probs=31.6
Q ss_pred CCCCCCcEEEEccCCceEeeeCCCCceeccCCc
Q psy6910 294 GPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPR 326 (1145)
Q Consensus 294 ~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr 326 (1145)
.+||+|||++.+.+|++||+||+|++|+|++|+
T Consensus 3 ~~LP~gWe~~~d~~g~~Yy~n~~t~~t~W~~P~ 35 (36)
T 1wr4_A 3 PGLPSGWEERKDAKGRTYYVNHNNRTTTWTRPI 35 (36)
T ss_dssp TTCCTTEEEEECSSSCEEEEETTTTEEESSCCC
T ss_pred CCCCCCCEEEECCCCCEEEEECCCCCEeCcCCC
Confidence 579999999999999999999999999999996
No 277
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.13 E-value=1.5e-10 Score=110.59 Aligned_cols=86 Identities=21% Similarity=0.387 Sum_probs=74.2
Q ss_pred ceEEEEEEec-ccceeEEEecCCCCC------CccEEEEEeccCCcccc-cCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy6910 435 ERIHSSLVKS-LRGLGFTIVGGDDSK------EEFLQIKSVVPNGPAAL-EGHLQTGDVLVYVNDKCVLGYTHHDMVSVF 506 (1145)
Q Consensus 435 ~~~~v~l~k~-~~glG~~i~gg~~~~------~~~i~V~~v~~~g~A~~-~g~l~~GD~il~vNg~~~~~~~~~~~~~~l 506 (1145)
+...|.|.|. ..||||+|.++.+.. ..+++|..|.++|||++ .| |++||+|++|||+.+.++++.+++++|
T Consensus 10 ~~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~~v~~~~~~~~~~~l 88 (114)
T 1uew_A 10 QTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAK-LKVGDRILAVNGQSIINMPHADIVKLI 88 (114)
T ss_dssp CCEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSS-CCTTCBEEEETTBCTTTSCHHHHHHHH
T ss_pred cceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4567888874 579999999986542 12579999999999999 56 999999999999999999999999999
Q ss_pred hcCCCCCeEEEEEEeCC
Q psy6910 507 QSISPGETVQLEVCRGY 523 (1145)
Q Consensus 507 ~~~~~g~~v~l~v~R~~ 523 (1145)
+. .|..|.|+|.|+-
T Consensus 89 ~~--~g~~v~l~v~r~~ 103 (114)
T 1uew_A 89 KD--AGLSVTLRIIPQE 103 (114)
T ss_dssp HH--TTTEEEEEECCCS
T ss_pred Hc--CCCeEEEEEEeCC
Confidence 98 6899999998863
No 278
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.13 E-value=2.1e-10 Score=111.63 Aligned_cols=90 Identities=14% Similarity=0.228 Sum_probs=83.4
Q ss_pred CccccceEeEEEeCCCCCCCceeeeccccCCCceEEEEecCCccccccCCCCCCcEEEeeCCEEecCCCHHHHHHHHHhh
Q psy6910 16 THWQDKETPVTLTVPPDGSLNFSVGGGSDSGEFAYVTNINKEKVKGAEKYLEEKAIILEIQGQKVAGYTRRDTIAWLNHC 95 (1145)
Q Consensus 16 ~~~~~~v~~~~~~~~~~g~~~~~i~gg~e~g~~~~v~~i~~~~~~~~sg~l~~GD~i~evng~~v~g~~~~~~~~~l~~~ 95 (1145)
..+.-..++|.+.|...+.|||+|.||.+...-++|..|..|+.|++.|.|.+||+|++|||++|.+++..++..+|+++
T Consensus 14 ~g~~~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~ 93 (125)
T 3hpk_A 14 LGIPTVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 93 (125)
T ss_dssp CCCCEEEEEEEEECCTTSCCCEEEEECSSCCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHS
T ss_pred cCCcCCCeEEEEEeCCCCCcCEEEeccCCCCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 34566788999999999999999999999888889999999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEec
Q psy6910 96 CRSGKTLTLRTVS 108 (1145)
Q Consensus 96 ~~~~~~v~~~~~p 108 (1145)
.+.|+|++..
T Consensus 94 ---~~~v~l~v~r 103 (125)
T 3hpk_A 94 ---KGEVTIHYNK 103 (125)
T ss_dssp ---CSEEEEEEEE
T ss_pred ---CCeEEEEEEE
Confidence 8889999865
No 279
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.12 E-value=2.4e-10 Score=103.84 Aligned_cols=83 Identities=33% Similarity=0.544 Sum_probs=70.6
Q ss_pred ccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHc--CCCe
Q psy6910 1032 QYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRN--GDST 1109 (1145)
Q Consensus 1032 ~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~--~~~~ 1109 (1145)
+.++|.|.|+..+|||++.+..+ ..+++|..| ++|||+ +| |++||+|++|||.++.++++++++++|++ .+..
T Consensus 3 ~~~~v~l~k~~~g~G~~~~~~~~--~~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~ 77 (88)
T 3bpu_A 3 ELITVHIVKGPMGFGFTIADSPG--GGGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSE 77 (88)
T ss_dssp EEEEEEEECBTTBSSCEEEECTT--SSSEEEEEC-CC--CC-TT-CCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCE
T ss_pred cEEEEEEEcCCCceeEEEEecCC--CCcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCE
Confidence 56889999998999999987543 357889887 999999 88 99999999999999999999999999985 4678
Q ss_pred EEEEEEeCCC
Q psy6910 1110 VRLLIKRGGS 1119 (1145)
Q Consensus 1110 v~L~v~R~~~ 1119 (1145)
+.|+|.|++.
T Consensus 78 v~l~v~R~g~ 87 (88)
T 3bpu_A 78 VTLLVQRQTR 87 (88)
T ss_dssp EEEEEEEECC
T ss_pred EEEEEEeCCc
Confidence 9999998764
No 280
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.12 E-value=3.1e-10 Score=105.79 Aligned_cols=86 Identities=31% Similarity=0.662 Sum_probs=75.8
Q ss_pred cccEEEEeecCCc-ceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCe
Q psy6910 1031 EQYHAIELSRGTR-GFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDST 1109 (1145)
Q Consensus 1031 ~~~~~v~l~k~~~-~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~ 1109 (1145)
...+.+.|.+... .|||++....+. ..+++|..|.++|+|+++| |++||+|++|||.++.++++.+++..++. +..
T Consensus 9 ~~~~~v~l~~~~~~~lG~~~~~~~~~-~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~ 85 (100)
T 2eeh_A 9 DIIHSVRVEKSPAGRLGFSVRGGSEH-GLGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVLTS-SSR 85 (100)
T ss_dssp CEECCEEECCCSSSSCSEEEECCTTT-TCCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHHHHS-CSS
T ss_pred CeEEEEEEEECCCCCccEEEEccccC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC-CCE
Confidence 4567788888765 599999987654 4689999999999999999 99999999999999999999999999998 688
Q ss_pred EEEEEEeCCC
Q psy6910 1110 VRLLIKRGGS 1119 (1145)
Q Consensus 1110 v~L~v~R~~~ 1119 (1145)
+.|+|.|++.
T Consensus 86 v~l~v~R~g~ 95 (100)
T 2eeh_A 86 LHMMVRRMGS 95 (100)
T ss_dssp EEEEEEECSC
T ss_pred EEEEEEECCc
Confidence 9999999875
No 281
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.12 E-value=2.1e-10 Score=112.44 Aligned_cols=78 Identities=28% Similarity=0.486 Sum_probs=69.1
Q ss_pred CcceeEEEEccCCc--ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCC--CeEEEEEEeC
Q psy6910 1042 TRGFGFSIRGGREF--QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGD--STVRLLIKRG 1117 (1145)
Q Consensus 1042 ~~~lG~sl~gg~~~--~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~--~~v~L~v~R~ 1117 (1145)
..+|||++.++.+. ...++||..|.++|+|+++|+|++||+|++|||+++.+++|++++++|+... ..|.|+|.|+
T Consensus 47 ~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 126 (131)
T 1wfg_A 47 GAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRS 126 (131)
T ss_dssp CTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEEE
T ss_pred CCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEcC
Confidence 45799999887643 2348999999999999999999999999999999999999999999999864 7899999987
Q ss_pred CC
Q psy6910 1118 GS 1119 (1145)
Q Consensus 1118 ~~ 1119 (1145)
+.
T Consensus 127 g~ 128 (131)
T 1wfg_A 127 GP 128 (131)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 282
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.12 E-value=2.2e-10 Score=107.38 Aligned_cols=84 Identities=27% Similarity=0.371 Sum_probs=71.9
Q ss_pred EEEEEEecc-cceeEEEecCCCCC--------CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy6910 437 IHSSLVKSL-RGLGFTIVGGDDSK--------EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQ 507 (1145)
Q Consensus 437 ~~v~l~k~~-~glG~~i~gg~~~~--------~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~ 507 (1145)
+.+.+.+.. .+|||++.++.+.. ..+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++++|+
T Consensus 6 ~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~ 85 (103)
T 2fcf_A 6 RRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIR 85 (103)
T ss_dssp EEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 678888876 57999999875531 247999999999999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEEEEeC
Q psy6910 508 SISPGETVQLEVCRG 522 (1145)
Q Consensus 508 ~~~~g~~v~l~v~R~ 522 (1145)
.. +..|.|+|.|.
T Consensus 86 ~~--~~~v~l~v~r~ 98 (103)
T 2fcf_A 86 KA--GNPVVFMVQSI 98 (103)
T ss_dssp TC--CSSEEEEEECC
T ss_pred hC--CCcEEEEEEEC
Confidence 85 45999999886
No 283
>2dmv_A Itchy homolog E3 ubiquitin protein ligase; WW domain, three stranded antiparallel beta sheet, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.12 E-value=4.6e-11 Score=92.32 Aligned_cols=35 Identities=34% Similarity=0.816 Sum_probs=32.8
Q ss_pred CCCCCCCcEEEEccCCceEeeeCCCCceeccCCcc
Q psy6910 293 LGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRL 327 (1145)
Q Consensus 293 ~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~ 327 (1145)
..+||+|||++++.+|++||+||+|++|+|++|+.
T Consensus 5 ~~~LP~GWe~~~d~~Gr~YY~n~~t~~T~We~P~~ 39 (43)
T 2dmv_A 5 SSGLPPGWEQRVDQHGRVYYVDHVEKRTTWDRPSG 39 (43)
T ss_dssp CCSCCTTEEEEECTTSCEEEEETTTCCEESSCSSS
T ss_pred CCCCCCCceEEECCCCCEEEEECCCCCEecCCcCC
Confidence 46799999999999999999999999999999974
No 284
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.11 E-value=7e-11 Score=108.85 Aligned_cols=76 Identities=24% Similarity=0.381 Sum_probs=69.4
Q ss_pred ecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEEEEEEeC
Q psy6910 443 KSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQLEVCRG 522 (1145)
Q Consensus 443 k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 522 (1145)
++..+|||+|.+|.+. ..+++|..|.+++||+++| |++||+|++|||+.+.+++|.+++++|+.. +..|.|+|.|+
T Consensus 13 ~~~~~lG~~l~~g~~~-~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~v~R~ 88 (94)
T 1vb7_A 13 AGPAPWGFRISGGRDF-HTPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQS--ASPLRLQLDRS 88 (94)
T ss_dssp CSSSCCSBCCEEETTT-TEEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC--CSSEEEEEECC
T ss_pred cCCCCccEEEecccCC-CCCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC--CCcEEEEEEEC
Confidence 4567999999998775 5689999999999999999 999999999999999999999999999985 37999999987
No 285
>2dwv_A Salvador homolog 1 protein; WW domain, dimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.11 E-value=3.9e-11 Score=94.92 Aligned_cols=35 Identities=26% Similarity=0.600 Sum_probs=32.9
Q ss_pred CCCCCCCcEEEEccCCceEeeeCCCCceeccCCcc
Q psy6910 293 LGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRL 327 (1145)
Q Consensus 293 ~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~ 327 (1145)
..+||+|||++++.+|++|||||+|++|+|++|+.
T Consensus 11 ~~~LP~GWe~~~d~~g~~YYvnh~t~~T~We~P~~ 45 (49)
T 2dwv_A 11 REGLPPGWERVESSEFGTYYVDHTNKRAQYRHPSG 45 (49)
T ss_dssp SSCCCTTEEEEEETTTEEEEEETTTTEEESSCCCC
T ss_pred CCCCCcCcEEEECCCCCEEEEECCCCCEeccCcCC
Confidence 36799999999999999999999999999999975
No 286
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.11 E-value=2.4e-10 Score=111.83 Aligned_cols=92 Identities=24% Similarity=0.433 Sum_probs=79.8
Q ss_pred CCcccEEEEeec-CCcceeEEEEccCCc----ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy6910 1029 HDEQYHAIELSR-GTRGFGFSIRGGREF----QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEII 1103 (1145)
Q Consensus 1029 ~~~~~~~v~l~k-~~~~lG~sl~gg~~~----~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~l 1103 (1145)
...+.+.|.|.+ ...+|||++.++.+. ...+++|..|.++|+|+++|+|++||+|++|||.++.++++++++++|
T Consensus 12 ~~~~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l 91 (129)
T 2dmz_A 12 SLFETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVL 91 (129)
T ss_dssp CCEEEEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHH
T ss_pred CCCcEEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 356678899955 567899999986542 146899999999999999999999999999999999999999999999
Q ss_pred HcCCCeEEEEEEeCCCc
Q psy6910 1104 RNGDSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1104 k~~~~~v~L~v~R~~~~ 1120 (1145)
+..+..+.|+|.|++..
T Consensus 92 ~~~~~~v~l~v~R~~~~ 108 (129)
T 2dmz_A 92 RNAGQVVHLTLVRRKTS 108 (129)
T ss_dssp HHCCSSEEEEEEEESSS
T ss_pred HcCCCeEEEEEEeCCcc
Confidence 99778899999998764
No 287
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.11 E-value=2e-10 Score=108.27 Aligned_cols=88 Identities=23% Similarity=0.403 Sum_probs=77.9
Q ss_pred CcccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCe
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDST 1109 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~ 1109 (1145)
....+.|.|.|+..+|||++.+... ..+++|..|.++|+|+++| |++||+|++|||.++.++++.+++.+++..+..
T Consensus 6 ~~~~r~v~l~k~~~~~G~~l~~~~~--~~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 82 (106)
T 2eei_A 6 SGQPRLCYLVKEGGSYGFSLKTVQG--KKGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKVKKSGSR 82 (106)
T ss_dssp CSSSEEEEEECCSSSCSCCEECCSS--CCSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHHCSE
T ss_pred CCCCEEEEEEECCCCCCEEEEeccC--CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 3456889999988899999987543 4689999999999999999 999999999999999999999999999988888
Q ss_pred EEEEEEeCCCc
Q psy6910 1110 VRLLIKRGGSV 1120 (1145)
Q Consensus 1110 v~L~v~R~~~~ 1120 (1145)
+.|++.|.+..
T Consensus 83 v~l~v~r~~~~ 93 (106)
T 2eei_A 83 VMFLLVDKETD 93 (106)
T ss_dssp EEEEECCTTTS
T ss_pred EEEEEEcCchh
Confidence 99999887653
No 288
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.10 E-value=3e-10 Score=106.49 Aligned_cols=86 Identities=30% Similarity=0.516 Sum_probs=75.2
Q ss_pred CcccEEEEeecCCcceeEEEEccCCc-------ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHH
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREF-------QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEI 1102 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~-------~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~ 1102 (1145)
..+.+.+.+.++. +|||++.++.+. ...+++|..|.++|||++ | |++||+|++|||.++.++++.+++.+
T Consensus 9 ~~~~~~v~l~~~~-~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~ 85 (103)
T 1n7t_A 9 AKQEIRVRVEKDP-ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSL 85 (103)
T ss_dssp SCCCEEEEEECSS-CCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTEECSSCCHHHHHHH
T ss_pred ccEEEEEEEccCC-CccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-C-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3455778888875 899999987541 256899999999999999 8 99999999999999999999999999
Q ss_pred HHcCCCeEEEEEEeCC
Q psy6910 1103 IRNGDSTVRLLIKRGG 1118 (1145)
Q Consensus 1103 lk~~~~~v~L~v~R~~ 1118 (1145)
++..+..+.|+|.|+.
T Consensus 86 ~~~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 86 LKTFQNTVELIIVREV 101 (103)
T ss_dssp HHHCCSEEEEEEECCC
T ss_pred hhcCCCeEEEEEEecC
Confidence 9988889999999874
No 289
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.10 E-value=3.2e-10 Score=107.09 Aligned_cols=82 Identities=21% Similarity=0.327 Sum_probs=72.7
Q ss_pred ccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCe-E
Q psy6910 1032 QYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDST-V 1110 (1145)
Q Consensus 1032 ~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~-v 1110 (1145)
..+.|.|.|++.+|||.+.+ ..+++|..|.++|||+++| |++||+|++|||+++.++++++++++|+..+++ +
T Consensus 23 ~~r~v~l~k~~~~~G~~l~~-----~~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v 96 (109)
T 2vsv_A 23 MPRSIRFTAEEGDLGFTLRG-----NAPVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEI 96 (109)
T ss_dssp SCEEEEECCGGGCCCEEEES-----SSSCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCE
T ss_pred CCEEEEEEeCCCceeEEEeC-----CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeE
Confidence 45789999988899999975 3478999999999999999 999999999999999999999999999987775 9
Q ss_pred EEEEEeCCC
Q psy6910 1111 RLLIKRGGS 1119 (1145)
Q Consensus 1111 ~L~v~R~~~ 1119 (1145)
.|+|.|...
T Consensus 97 ~l~V~~~~~ 105 (109)
T 2vsv_A 97 EMKVVSLLD 105 (109)
T ss_dssp EEEEESCC-
T ss_pred EEEEEECCC
Confidence 999987653
No 290
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.10 E-value=2.9e-10 Score=105.15 Aligned_cols=88 Identities=28% Similarity=0.566 Sum_probs=76.7
Q ss_pred ccEEEEeecCCcceeEEEEccCCc---ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCC
Q psy6910 1032 QYHAIELSRGTRGFGFSIRGGREF---QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDS 1108 (1145)
Q Consensus 1032 ~~~~v~l~k~~~~lG~sl~gg~~~---~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~ 1108 (1145)
+.+++.+.++..+|||++.+..+. ...+++|..|.++|+|+++|+|++||+|++|||.++.++++.+++.+++..+.
T Consensus 4 ~~~~v~l~~~~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 83 (97)
T 2iwn_A 4 ETFDVELTKNVQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQ 83 (97)
T ss_dssp EEEEEEEECBTTBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTCCS
T ss_pred EEEEEEEecCCCCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 456788888888999999886431 24589999999999999999999999999999999999999999999998888
Q ss_pred eEEEEEEeCCC
Q psy6910 1109 TVRLLIKRGGS 1119 (1145)
Q Consensus 1109 ~v~L~v~R~~~ 1119 (1145)
.+.|+|.|++.
T Consensus 84 ~v~l~v~r~g~ 94 (97)
T 2iwn_A 84 TVLLTLMRRGE 94 (97)
T ss_dssp EEEEEEEEEEE
T ss_pred eEEEEEEeCCC
Confidence 89999988763
No 291
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.10 E-value=3.7e-10 Score=104.42 Aligned_cols=85 Identities=14% Similarity=0.314 Sum_probs=74.7
Q ss_pred CcccEEEEeec-CCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCC
Q psy6910 1030 DEQYHAIELSR-GTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDS 1108 (1145)
Q Consensus 1030 ~~~~~~v~l~k-~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~ 1108 (1145)
..+.+++.|.+ ...+|||++... ..+++|..|.++|+|+++|+|++||+|++|||+++.++++.+++.+++..++
T Consensus 6 ~~~~~~v~l~~~~~~glG~~~~~~----~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~~ 81 (96)
T 2qkv_A 6 SLEKFNVDLMKKAGKELGLSLSPN----EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGANG 81 (96)
T ss_dssp CCCCEEEEEECBTTBCCCEEEEEC----SSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCSS
T ss_pred HCceEEEEEEeCCCCCccEEEEeC----CCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCC
Confidence 45567888865 456899998762 4579999999999999999999999999999999999999999999999888
Q ss_pred eEEEEEEeCC
Q psy6910 1109 TVRLLIKRGG 1118 (1145)
Q Consensus 1109 ~v~L~v~R~~ 1118 (1145)
.+.|+|.|..
T Consensus 82 ~v~l~v~R~~ 91 (96)
T 2qkv_A 82 KVSMEVTRPK 91 (96)
T ss_dssp EEEEEEECCC
T ss_pred cEEEEEEeCC
Confidence 9999999864
No 292
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.10 E-value=1.4e-10 Score=108.23 Aligned_cols=83 Identities=25% Similarity=0.381 Sum_probs=74.2
Q ss_pred ccceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Q psy6910 433 IGERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPG 512 (1145)
Q Consensus 433 ~g~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g 512 (1145)
..+.+.+.|.+...||||.+.+. .+++|..|.+++||+++| |++||+|++|||+.+.++++.+++++|+. .+
T Consensus 13 ~~~~~~v~l~~~~~g~G~~~~~~-----~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~--~~ 84 (100)
T 1whd_A 13 NGEKLQITIRRGKDGFGFTICCD-----SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRS--CP 84 (100)
T ss_dssp CCEEEEEEEECCSSSSSCBCCCS-----SSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHHHH--CS
T ss_pred ccceEEEEEECCCCeeeEEEeCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc--CC
Confidence 34678899999999999998774 359999999999999999 99999999999999999999999999998 45
Q ss_pred CeEEEEEEeCC
Q psy6910 513 ETVQLEVCRGY 523 (1145)
Q Consensus 513 ~~v~l~v~R~~ 523 (1145)
..|.|+|.|..
T Consensus 85 ~~v~l~v~R~~ 95 (100)
T 1whd_A 85 SEIILLVWRVS 95 (100)
T ss_dssp SEEEEEEEECC
T ss_pred CeEEEEEEECC
Confidence 67999999873
No 293
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.10 E-value=1.2e-10 Score=106.49 Aligned_cols=85 Identities=19% Similarity=0.222 Sum_probs=76.3
Q ss_pred cceEeEEEeCCCCCCCceeeeccccCCCceEEEEecCCccccccCCCCCCcEEEeeCCEEecCCCHHHHHHHHHhhcCCC
Q psy6910 20 DKETPVTLTVPPDGSLNFSVGGGSDSGEFAYVTNINKEKVKGAEKYLEEKAIILEIQGQKVAGYTRRDTIAWLNHCCRSG 99 (1145)
Q Consensus 20 ~~v~~~~~~~~~~g~~~~~i~gg~e~g~~~~v~~i~~~~~~~~sg~l~~GD~i~evng~~v~g~~~~~~~~~l~~~~~~~ 99 (1145)
+.+++|.|.|...+.|||+|.+ + ..-++|++|..|+.|++.|.|++||+|++|||++| +++.+|+.++|+.. .
T Consensus 5 ~~~r~v~l~k~~~~~lG~~i~~--~-~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~---~ 77 (91)
T 2e7k_A 5 SSGRMVGIRKTAGEHLGVTFRV--E-GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNA---S 77 (91)
T ss_dssp CCSCBCCBCCCTTCCCCEEEEE--S-SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTC---C
T ss_pred CCcEEEEEEECCCCcEeEEEEe--c-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcC---C
Confidence 4678889999889999999997 2 34578999999999999999999999999999999 99999999999998 8
Q ss_pred CcEEEEEecCCc
Q psy6910 100 KTLTLRTVSSAY 111 (1145)
Q Consensus 100 ~~v~~~~~p~~~ 111 (1145)
+.|+|++.|+..
T Consensus 78 ~~v~l~v~~~~~ 89 (91)
T 2e7k_A 78 GSVILKILSGPS 89 (91)
T ss_dssp SSBCEEEECCSC
T ss_pred CeEEEEEEECCc
Confidence 899999998643
No 294
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.10 E-value=4.4e-10 Score=108.29 Aligned_cols=92 Identities=30% Similarity=0.597 Sum_probs=81.6
Q ss_pred CcccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCe
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDST 1109 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~ 1109 (1145)
....+.|.|.+...+|||++.++.+ ..+++|..|.++|+|+++|+|++||+|++|||.++.++++.+++.+++..+..
T Consensus 12 ~~~~~~v~l~k~~~glG~~l~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 89 (119)
T 1tp5_A 12 PREPRRIVIHRGSTGLGFNIVGGED--GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQT 89 (119)
T ss_dssp CCSCEEEEEECTTSCCCEEEEECGG--GCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSE
T ss_pred CCccEEEEEEECCCCccEEEecCCC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4567899999988899999998653 36899999999999999999999999999999999999999999999998889
Q ss_pred EEEEEEeCCCcCCC
Q psy6910 1110 VRLLIKRGGSVVAP 1123 (1145)
Q Consensus 1110 v~L~v~R~~~~~~~ 1123 (1145)
+.|+|.|++..+..
T Consensus 90 v~l~v~r~~~~~~~ 103 (119)
T 1tp5_A 90 VTIIAQYKPEEYSR 103 (119)
T ss_dssp EEEEEEECHHHHHT
T ss_pred EEEEEEECCchhcc
Confidence 99999997765433
No 295
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.10 E-value=1.6e-10 Score=121.29 Aligned_cols=86 Identities=26% Similarity=0.346 Sum_probs=78.1
Q ss_pred cceEEEEEEec-ccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Q psy6910 434 GERIHSSLVKS-LRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPG 512 (1145)
Q Consensus 434 g~~~~v~l~k~-~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g 512 (1145)
.....|.|.|. ..||||+|.||.+. ..+++|..|.++|||+++| |++||+|++|||.++.++++.+++.+|+. |
T Consensus 83 ~~~~~v~l~k~~~~~lG~~i~~~~~~-~~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~~---~ 157 (192)
T 3k1r_A 83 RKLKEVRLDRLHPEGLGLSVRGGLEF-GCGLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLIRT---E 157 (192)
T ss_dssp SSCEEEEEETTSTTCCCEEEEEEGGG-TEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHTS---S
T ss_pred CceEEEEEEeCCCCceeEEEEccccc-CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHcC---C
Confidence 45678999997 67999999998765 5689999999999999999 99999999999999999999999999998 7
Q ss_pred CeEEEEEEeCCC
Q psy6910 513 ETVQLEVCRGYP 524 (1145)
Q Consensus 513 ~~v~l~v~R~~~ 524 (1145)
..|.|+|.|...
T Consensus 158 ~~v~l~v~r~g~ 169 (192)
T 3k1r_A 158 KTVSIKVRHIGL 169 (192)
T ss_dssp SEEEEEEEECCE
T ss_pred CeEEEEEEECCc
Confidence 899999999754
No 296
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.10 E-value=1.4e-10 Score=106.84 Aligned_cols=85 Identities=38% Similarity=0.636 Sum_probs=73.5
Q ss_pred EEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEEEE
Q psy6910 1034 HAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVRLL 1113 (1145)
Q Consensus 1034 ~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~L~ 1113 (1145)
+.+.+ ++..+|||++.++.+. ..+++|..|.+++||+++| |++||+|++|||.++.++++.+++++|+..+..+.|+
T Consensus 8 ~~~~~-~~~~~lG~~l~~g~~~-~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~ 84 (94)
T 1vb7_A 8 LTVDV-AGPAPWGFRISGGRDF-HTPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRLQ 84 (94)
T ss_dssp EEEEE-CSSSCCSBCCEEETTT-TEEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEE
T ss_pred EEEEe-cCCCCccEEEecccCC-CCCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEE
Confidence 33444 3556899999887654 5689999999999999999 9999999999999999999999999999887889999
Q ss_pred EEeCCCcC
Q psy6910 1114 IKRGGSVV 1121 (1145)
Q Consensus 1114 v~R~~~~~ 1121 (1145)
|.|++...
T Consensus 85 v~R~g~~~ 92 (94)
T 1vb7_A 85 LDRSSGPS 92 (94)
T ss_dssp EECCCCCC
T ss_pred EEECCcCC
Confidence 99987643
No 297
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.10 E-value=5.5e-10 Score=104.60 Aligned_cols=88 Identities=34% Similarity=0.604 Sum_probs=74.2
Q ss_pred ccEEEEeecCC-cceeEEEEccCCcc--------cccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHH
Q psy6910 1032 QYHAIELSRGT-RGFGFSIRGGREFQ--------NMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEI 1102 (1145)
Q Consensus 1032 ~~~~v~l~k~~-~~lG~sl~gg~~~~--------~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~ 1102 (1145)
..+++.+.+.. ..|||++.+..+.. ..+++|..|.++|||+++|+|++||+|++|||.++.++++.+++++
T Consensus 4 dp~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~ 83 (103)
T 2fcf_A 4 QPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEA 83 (103)
T ss_dssp SCEEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CCEEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 34788888765 57999998765421 2589999999999999999999999999999999999999999999
Q ss_pred HHcCCCeEEEEEEeCCC
Q psy6910 1103 IRNGDSTVRLLIKRGGS 1119 (1145)
Q Consensus 1103 lk~~~~~v~L~v~R~~~ 1119 (1145)
|+..++.+.|+|.|..+
T Consensus 84 l~~~~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 84 IRKAGNPVVFMVQSIIS 100 (103)
T ss_dssp HHTCCSSEEEEEECCCC
T ss_pred HHhCCCcEEEEEEECCC
Confidence 99988899999998764
No 298
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.09 E-value=4.4e-10 Score=108.79 Aligned_cols=91 Identities=27% Similarity=0.424 Sum_probs=78.3
Q ss_pred CcccEEEEeecCC-cceeEEEEccCC---cccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHc
Q psy6910 1030 DEQYHAIELSRGT-RGFGFSIRGGRE---FQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRN 1105 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~-~~lG~sl~gg~~---~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~ 1105 (1145)
..+.++|.|.++. .+|||++.++.. ....+++|..|.++++|+++|+|++||+|++|||+++.++++++++++|+.
T Consensus 13 ~~~~~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 92 (122)
T 1v5q_A 13 HTETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRD 92 (122)
T ss_dssp CEEEEEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHH
T ss_pred cceeEEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 4567889998874 799999997631 124679999999999999999999999999999999998899999999998
Q ss_pred C--CCeEEEEEEeCCCc
Q psy6910 1106 G--DSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1106 ~--~~~v~L~v~R~~~~ 1120 (1145)
. +..+.|+|.|++..
T Consensus 93 ~~~g~~v~l~v~R~~~~ 109 (122)
T 1v5q_A 93 SSITSKVTLEIEFDVAE 109 (122)
T ss_dssp HTTTTCEEEEEEEECCC
T ss_pred CCCCCeEEEEEEECCcc
Confidence 6 56899999998753
No 299
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.09 E-value=1.9e-10 Score=125.33 Aligned_cols=91 Identities=30% Similarity=0.449 Sum_probs=81.2
Q ss_pred CcccEEEEeecCC-cceeEEEEccCCcccccEEEEEEcCCChhcc-cCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCC
Q psy6910 1030 DEQYHAIELSRGT-RGFGFSIRGGREFQNMALFVLQIAENGPAAL-DGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGD 1107 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~-~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~-~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~ 1107 (1145)
....+.|.|.|.. .+|||+|.++.+. ..+++|..|.++|+|++ +| |++||+|++|||+++.+++|.+++.+|+..+
T Consensus 75 ~~~~r~V~L~k~~~~glGf~I~gg~d~-~~gi~V~~V~~gspA~~~aG-L~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g 152 (263)
T 1z87_A 75 LLQRRRVTVRKADAGGLGISIKGGREN-KMPILISKIFKGLAADQTEA-LFVGDAILSVNGEDLSSATHDEAVQALKKTG 152 (263)
T ss_dssp SCSSEEECCCTTTTCCCCCEEEEETTT-TEEEEEEECCTTSHHHHCTT-CCSSCEEEEESSCBCTTSCHHHHHHHHHHCC
T ss_pred CCccEEEEEEeCCCCCEeEEEeeccCC-CCCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCcCHHHHHHHHhcCC
Confidence 3467899999974 7999999998765 57899999999999999 56 9999999999999999999999999999998
Q ss_pred CeEEEEEEeCCCcCC
Q psy6910 1108 STVRLLIKRGGSVVA 1122 (1145)
Q Consensus 1108 ~~v~L~v~R~~~~~~ 1122 (1145)
+.|.|+|.|.....+
T Consensus 153 ~~V~L~V~R~~~~~~ 167 (263)
T 1z87_A 153 KEVVLEVKYMKEVSP 167 (263)
T ss_dssp SCCCEEEECCSSSSC
T ss_pred CeEEEEEEeCccccc
Confidence 899999999876543
No 300
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.09 E-value=3.1e-10 Score=109.18 Aligned_cols=87 Identities=22% Similarity=0.328 Sum_probs=73.2
Q ss_pred ccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcC----C
Q psy6910 1032 QYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNG----D 1107 (1145)
Q Consensus 1032 ~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~----~ 1107 (1145)
..+.+.+.+. .+|||++.++.+....+++|.+|.++|||+++|.|++||+|++|||.++.+++|++++++|+.. +
T Consensus 18 ~~~~~~~~~~-~glG~~i~gg~~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g 96 (118)
T 1v6b_A 18 DVRLLRIKKE-GSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGG 96 (118)
T ss_dssp CEEEEEEESC-SCCCCEEEEBTTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTC
T ss_pred eEEEEEECCC-CccCEEEEcccCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCC
Confidence 3455666655 4899999988765345699999999999999944999999999999999999999999999864 6
Q ss_pred CeEEEEEEeCCC
Q psy6910 1108 STVRLLIKRGGS 1119 (1145)
Q Consensus 1108 ~~v~L~v~R~~~ 1119 (1145)
..|.|+|.|...
T Consensus 97 ~~v~l~v~r~~~ 108 (118)
T 1v6b_A 97 DWIDLVVAVCPP 108 (118)
T ss_dssp SEEEEEEECCCS
T ss_pred CeEEEEEEeCCc
Confidence 789999999654
No 301
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.09 E-value=7.2e-10 Score=107.10 Aligned_cols=89 Identities=33% Similarity=0.568 Sum_probs=77.3
Q ss_pred CcccEEEEeecCCcceeEEEEccCCc--ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcC-
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREF--QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNG- 1106 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~--~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~- 1106 (1145)
..+.+.+.+.+...+|||.+.+.... +..+++|..|.++|||+++|+|++||+|++|||+++.++++++++++|+..
T Consensus 28 ~~~~~~v~l~~~~~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~ 107 (121)
T 2kom_A 28 IGKRLNIQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTK 107 (121)
T ss_dssp SCEEEEEEEECCTTCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCC
T ss_pred CCeEEEEEEEcCCCcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Confidence 44567788888888999999876532 136899999999999999999999999999999999999999999999975
Q ss_pred -CCeEEEEEEeCC
Q psy6910 1107 -DSTVRLLIKRGG 1118 (1145)
Q Consensus 1107 -~~~v~L~v~R~~ 1118 (1145)
+..|.|+|.|++
T Consensus 108 ~g~~v~l~v~R~g 120 (121)
T 2kom_A 108 MEGTVSLLVFRQE 120 (121)
T ss_dssp SSCEEEEEEEECC
T ss_pred CCCEEEEEEEeCC
Confidence 678999999875
No 302
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.09 E-value=3.9e-10 Score=107.72 Aligned_cols=85 Identities=15% Similarity=0.259 Sum_probs=77.4
Q ss_pred ceEeEEEeCCCCCCCceeeeccccCCCceEEEEecCCccccccCCCCCCcEEEeeCCEEecCCCHHHHHHHHHhhcCCCC
Q psy6910 21 KETPVTLTVPPDGSLNFSVGGGSDSGEFAYVTNINKEKVKGAEKYLEEKAIILEIQGQKVAGYTRRDTIAWLNHCCRSGK 100 (1145)
Q Consensus 21 ~v~~~~~~~~~~g~~~~~i~gg~e~g~~~~v~~i~~~~~~~~sg~l~~GD~i~evng~~v~g~~~~~~~~~l~~~~~~~~ 100 (1145)
..++|.+.|+..+.|||+|.||.+.+..++|..|..|+.|++.|.|.+||+|++|||++|.+++.+++.++|+.. .+
T Consensus 24 ~~~~V~l~~~~~~~lG~~l~~~~~~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~---~~ 100 (114)
T 2gzv_A 24 VPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV---KG 100 (114)
T ss_dssp CCEEEEEECCTTSCCSEEEEECCC--CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC---CS
T ss_pred CCEEEEEEECCCCcEeEEEEeCCCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CC
Confidence 568899999999999999999988777899999999999999999999999999999999999999999999988 78
Q ss_pred cEEEEEec
Q psy6910 101 TLTLRTVS 108 (1145)
Q Consensus 101 ~v~~~~~p 108 (1145)
.|+|++..
T Consensus 101 ~v~l~v~~ 108 (114)
T 2gzv_A 101 EVTIHYNK 108 (114)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEEe
Confidence 88888865
No 303
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.09 E-value=1e-10 Score=110.22 Aligned_cols=84 Identities=21% Similarity=0.285 Sum_probs=74.8
Q ss_pred ceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCe
Q psy6910 435 ERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGET 514 (1145)
Q Consensus 435 ~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~ 514 (1145)
....|.|.|+..||||+|.++.. ..+++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++. .+..
T Consensus 8 ~~r~v~l~k~~~~~G~~l~~~~~--~~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~ 82 (106)
T 2eei_A 8 QPRLCYLVKEGGSYGFSLKTVQG--KKGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKVKK--SGSR 82 (106)
T ss_dssp SSEEEEEECCSSSCSCCEECCSS--CCSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHH--HCSE
T ss_pred CCEEEEEEECCCCCCEEEEeccC--CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCe
Confidence 44678999998999999987643 3579999999999999999 99999999999999999999999999987 4789
Q ss_pred EEEEEEeCC
Q psy6910 515 VQLEVCRGY 523 (1145)
Q Consensus 515 v~l~v~R~~ 523 (1145)
+.|+|.|..
T Consensus 83 v~l~v~r~~ 91 (106)
T 2eei_A 83 VMFLLVDKE 91 (106)
T ss_dssp EEEEECCTT
T ss_pred EEEEEEcCc
Confidence 999998763
No 304
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.09 E-value=4.1e-10 Score=102.73 Aligned_cols=82 Identities=20% Similarity=0.257 Sum_probs=69.3
Q ss_pred ceEEEEEEeccc---ceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy6910 435 ERIHSSLVKSLR---GLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISP 511 (1145)
Q Consensus 435 ~~~~v~l~k~~~---glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~ 511 (1145)
....+.+.|... +|||+|.+.......+++|..|.++|||+++| |++||+|++|||.++.+++++++.+++++
T Consensus 6 ~~~~v~i~k~~~~~~~~Gf~v~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~~l~~--- 81 (94)
T 3kzd_A 6 VTHSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ--- 81 (94)
T ss_dssp EEEEEEEEC------CCSEEEEEECSSSSCEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHS---
T ss_pred ceeEEEEEeCCCCcCCcCEEEEecCCCCcCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC---
Confidence 457788888763 89999998543324579999999999999999 99999999999999999999999999986
Q ss_pred CCeEEEEEEe
Q psy6910 512 GETVQLEVCR 521 (1145)
Q Consensus 512 g~~v~l~v~R 521 (1145)
..++|+|+.
T Consensus 82 -~~l~ltV~~ 90 (94)
T 3kzd_A 82 -PSLGLLVRT 90 (94)
T ss_dssp -SEEEEEEEE
T ss_pred -CeEEEEEEe
Confidence 379998865
No 305
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.08 E-value=1.2e-10 Score=108.66 Aligned_cols=84 Identities=25% Similarity=0.303 Sum_probs=70.8
Q ss_pred eEEEEEEec-ccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCe
Q psy6910 436 RIHSSLVKS-LRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGET 514 (1145)
Q Consensus 436 ~~~v~l~k~-~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~ 514 (1145)
...+.+.+. ..+|||+|.+|.+. ..+++|.+|.++|||+++|.|++||+|++|||+++.+. +.+++.+++. .+..
T Consensus 10 ~~~~~v~~~~~~~~G~~~~gg~~~-~~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~--~~~~ 85 (100)
T 2edp_A 10 FQYVPVQLQGGAPWGFTLKGGLEH-CEPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALILIKG--SFRI 85 (100)
T ss_dssp CEEEEEECCSCSCCCCCEEEEGGG-TEEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHT--CCSS
T ss_pred cEEEEEEECCCCCcCEEEeccCCC-CCCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHh--CCCe
Confidence 344444443 36899999998765 56799999999999999955999999999999999997 8999999998 4789
Q ss_pred EEEEEEeCC
Q psy6910 515 VQLEVCRGY 523 (1145)
Q Consensus 515 v~l~v~R~~ 523 (1145)
|.|+|.|+-
T Consensus 86 v~l~v~R~~ 94 (100)
T 2edp_A 86 LKLIVRRRN 94 (100)
T ss_dssp CEEEEEECC
T ss_pred EEEEEEeCC
Confidence 999999974
No 306
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.08 E-value=1.3e-10 Score=106.28 Aligned_cols=80 Identities=24% Similarity=0.299 Sum_probs=70.1
Q ss_pred EEEEEEe-cccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeE
Q psy6910 437 IHSSLVK-SLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETV 515 (1145)
Q Consensus 437 ~~v~l~k-~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v 515 (1145)
..|.|.| ...+|||++.+. ..+++|.+|.++|||+++|.|++||+|++|||.++ +.++++++++|+. .+..|
T Consensus 8 r~v~l~k~~~~~lG~~i~~~----~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~--~~~~v 80 (91)
T 2e7k_A 8 RMVGIRKTAGEHLGVTFRVE----GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRN--ASGSV 80 (91)
T ss_dssp CBCCBCCCTTCCCCEEEEES----SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHT--CCSSB
T ss_pred EEEEEEECCCCcEeEEEEec----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHc--CCCeE
Confidence 4567766 456899999984 34699999999999999999999999999999999 9999999999998 47799
Q ss_pred EEEEEeCC
Q psy6910 516 QLEVCRGY 523 (1145)
Q Consensus 516 ~l~v~R~~ 523 (1145)
.|+|.|.+
T Consensus 81 ~l~v~~~~ 88 (91)
T 2e7k_A 81 ILKILSGP 88 (91)
T ss_dssp CEEEECCS
T ss_pred EEEEEECC
Confidence 99998864
No 307
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.08 E-value=3.5e-10 Score=109.54 Aligned_cols=85 Identities=27% Similarity=0.362 Sum_probs=72.9
Q ss_pred EEEEEEecc-cceeEEEecCCCC--------CCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy6910 437 IHSSLVKSL-RGLGFTIVGGDDS--------KEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQ 507 (1145)
Q Consensus 437 ~~v~l~k~~-~glG~~i~gg~~~--------~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~ 507 (1145)
..+.+.|.. .+|||++.++.+. ...+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++++|+
T Consensus 26 ~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 105 (123)
T 2iwq_A 26 RRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIR 105 (123)
T ss_dssp EEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 567788764 6899999987542 1347999999999999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEEEEeCC
Q psy6910 508 SISPGETVQLEVCRGY 523 (1145)
Q Consensus 508 ~~~~g~~v~l~v~R~~ 523 (1145)
.. +..|.|+|.|..
T Consensus 106 ~~--~~~v~l~v~r~~ 119 (123)
T 2iwq_A 106 KA--GNPVVFMVQSII 119 (123)
T ss_dssp HC--CSSEEEEEECCC
T ss_pred cC--CCeEEEEEEECC
Confidence 84 569999998863
No 308
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.08 E-value=6.3e-10 Score=103.89 Aligned_cols=89 Identities=20% Similarity=0.339 Sum_probs=73.4
Q ss_pred CcccEEEEeecCC-cceeEEEEccCCc-ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHc--
Q psy6910 1030 DEQYHAIELSRGT-RGFGFSIRGGREF-QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRN-- 1105 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~-~~lG~sl~gg~~~-~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~-- 1105 (1145)
...++.+.+.+.. .+|||++...... ...+++|..|.++|+|+++|.|++||+|++|||+++.++++++++++|+.
T Consensus 7 ~~~~~~v~l~k~~g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~ 86 (101)
T 2yt7_A 7 GDNCREVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETK 86 (101)
T ss_dssp TCCCEEEEEECCTTCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTT
T ss_pred CCceEEEEEEeCCCCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 4567888888754 6899999753211 12369999999999999965599999999999999999999999999998
Q ss_pred CCCeEEEEEEeCC
Q psy6910 1106 GDSTVRLLIKRGG 1118 (1145)
Q Consensus 1106 ~~~~v~L~v~R~~ 1118 (1145)
.+..|.|+|.|..
T Consensus 87 ~g~~v~l~v~R~~ 99 (101)
T 2yt7_A 87 SQTSVTLSIVHCP 99 (101)
T ss_dssp TSSEEEEEECCCC
T ss_pred CCCeEEEEEEeCC
Confidence 5678999998754
No 309
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.08 E-value=1.6e-10 Score=107.85 Aligned_cols=87 Identities=32% Similarity=0.468 Sum_probs=74.0
Q ss_pred cceEEEEEEe--cccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy6910 434 GERIHSSLVK--SLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISP 511 (1145)
Q Consensus 434 g~~~~v~l~k--~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~ 511 (1145)
.+...+.|.+ ...||||+|.++.+. ..+++|..|.+++||+++| |++||+|++|||+.+.++++.+++.+++.
T Consensus 7 ~~~~~v~l~~~~~~~~lG~~~~~~~~~-~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~--- 81 (101)
T 1uez_A 7 GEVRLVSLRRAKAHEGLGFSIRGGSEH-GVGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKALKG--- 81 (101)
T ss_dssp CCCEEECCCCCCTTTCSSEEEEECTTT-TCCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHHSSS---
T ss_pred CccEEEEEEECCCCCcccEEEeCCCCC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHhhcC---
Confidence 3456677776 457999999998765 5679999999999999999 99999999999999999999888888865
Q ss_pred CCeEEEEEEeCCCC
Q psy6910 512 GETVQLEVCRGYPL 525 (1145)
Q Consensus 512 g~~v~l~v~R~~~~ 525 (1145)
+..|.|+|.|+-..
T Consensus 82 ~~~v~l~v~R~g~~ 95 (101)
T 1uez_A 82 SKKLVLSVYSAGRI 95 (101)
T ss_dssp SSSCCEEECCCCCC
T ss_pred CCeEEEEEEECCcc
Confidence 45899999887443
No 310
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.07 E-value=2.6e-10 Score=107.50 Aligned_cols=84 Identities=30% Similarity=0.524 Sum_probs=74.3
Q ss_pred cEEEEeecCC-cceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEE
Q psy6910 1033 YHAIELSRGT-RGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVR 1111 (1145)
Q Consensus 1033 ~~~v~l~k~~-~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~ 1111 (1145)
.+.+.|.+.. ..|||.+....+ ..+++|..|.++|||+++| |++||+|++|||.++.++++.+++.+|+..+..+.
T Consensus 2 ~r~v~l~~~~~~~~G~~l~~~~~--~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 78 (106)
T 3ngh_A 2 PRESKLSKQEGQNYGFFLRIEKD--TDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVT 78 (106)
T ss_dssp CEEEEEECCTTCCCCCEEECCTT--CCSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHTTTEEE
T ss_pred CEEEEEEeCCCCeeCEEEEEEeC--CCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEE
Confidence 3567888776 589999987654 4579999999999999999 99999999999999999999999999998888999
Q ss_pred EEEEeCCC
Q psy6910 1112 LLIKRGGS 1119 (1145)
Q Consensus 1112 L~v~R~~~ 1119 (1145)
|+|.|++.
T Consensus 79 l~v~r~~~ 86 (106)
T 3ngh_A 79 LLVLDGDS 86 (106)
T ss_dssp EEEECHHH
T ss_pred EEEEECCe
Confidence 99998764
No 311
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.07 E-value=5.1e-10 Score=106.61 Aligned_cols=84 Identities=27% Similarity=0.450 Sum_probs=74.8
Q ss_pred eEEEEEEec-ccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCe
Q psy6910 436 RIHSSLVKS-LRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGET 514 (1145)
Q Consensus 436 ~~~v~l~k~-~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~ 514 (1145)
+++|.|.|+ ..||||++.++.+ ..+++|.+|.++|||+++|.|++||+|++|||..+.++++.++.++|+.. .|..
T Consensus 2 ~~~v~l~~~~~~glG~~~~~~~~--~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~g~~ 78 (112)
T 1qau_A 2 VISVRLFKRKVGGLGFLVKERVS--KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI-ASET 78 (112)
T ss_dssp EEEEEEECBTTTBTSEEEEECSS--SSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHS-CSSS
T ss_pred EEEEEEEcCCCCceeEEEEecCC--CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCCc
Confidence 578899887 5799999998754 35699999999999999995599999999999999999999999999984 5789
Q ss_pred EEEEEEeC
Q psy6910 515 VQLEVCRG 522 (1145)
Q Consensus 515 v~l~v~R~ 522 (1145)
|.|+|.|+
T Consensus 79 v~l~v~R~ 86 (112)
T 1qau_A 79 HVVLILRG 86 (112)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEeC
Confidence 99999987
No 312
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.07 E-value=5.7e-10 Score=105.73 Aligned_cols=91 Identities=20% Similarity=0.347 Sum_probs=81.3
Q ss_pred CccccceEeEEEeCCCCCCCceeeeccccCCC------------ceEEEEecCCccccccCCCCCCcEEEeeCCEEecCC
Q psy6910 16 THWQDKETPVTLTVPPDGSLNFSVGGGSDSGE------------FAYVTNINKEKVKGAEKYLEEKAIILEIQGQKVAGY 83 (1145)
Q Consensus 16 ~~~~~~v~~~~~~~~~~g~~~~~i~gg~e~g~------------~~~v~~i~~~~~~~~sg~l~~GD~i~evng~~v~g~ 83 (1145)
.+|..+.+++.|.|...+.|||+|.|+.+.+. -++|..|..|+.|++.| |++||+|++|||++|.++
T Consensus 2 s~y~~~~~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~ 80 (109)
T 1q3o_A 2 SDYIIKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKV 80 (109)
T ss_dssp -CEEEEEEEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTC
T ss_pred CccccCcEEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCC
Confidence 46888899999999889999999999887542 37899999999999999 999999999999999999
Q ss_pred CHHHHHHHHHhhcCCCCcEEEEEecCC
Q psy6910 84 TRRDTIAWLNHCCRSGKTLTLRTVSSA 110 (1145)
Q Consensus 84 ~~~~~~~~l~~~~~~~~~v~~~~~p~~ 110 (1145)
+..++..+|+.. ...|.|++++..
T Consensus 81 ~~~~~~~~l~~~---~~~v~l~v~~~~ 104 (109)
T 1q3o_A 81 GHRQVVNMIRQG---GNTLMVKVVMVT 104 (109)
T ss_dssp CHHHHHHHHHHT---TTEEEEEEEEEE
T ss_pred CHHHHHHHHHhC---CCEEEEEEEECC
Confidence 999999999998 888999998754
No 313
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.07 E-value=7.2e-10 Score=104.61 Aligned_cols=89 Identities=27% Similarity=0.518 Sum_probs=77.1
Q ss_pred CcccEEEEeecCC-cceeEEEEccCCc-----ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy6910 1030 DEQYHAIELSRGT-RGFGFSIRGGREF-----QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEII 1103 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~-~~lG~sl~gg~~~-----~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~l 1103 (1145)
..+.+.|.|.|+. .+|||++.++.+. ...+++|..|.++|||+ +| |++||+|++|||.++.++++.+++..+
T Consensus 5 ~~~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v~~~~~~~~~~~~ 82 (107)
T 2h2b_A 5 IWEQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSMDNVEHAFAVQQL 82 (107)
T ss_dssp CEEEEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TT-BCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred cceeEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hC-CCCCCEEEEECCEECCCccHHHHHHHh
Confidence 3456889999985 6999999987652 24589999999999999 88 999999999999999999999998888
Q ss_pred HcCCCeEEEEEEeCCCc
Q psy6910 1104 RNGDSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1104 k~~~~~v~L~v~R~~~~ 1120 (1145)
+..+..+.|+|.|++..
T Consensus 83 ~~~g~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 83 RKSGKNAKITIRRKKGG 99 (107)
T ss_dssp HTCCSEEEEEEEEESCC
T ss_pred hCCCCEEEEEEEECCCC
Confidence 88888999999987753
No 314
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.07 E-value=3.7e-10 Score=104.77 Aligned_cols=86 Identities=24% Similarity=0.534 Sum_probs=74.5
Q ss_pred cccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCe-
Q psy6910 1031 EQYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDST- 1109 (1145)
Q Consensus 1031 ~~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~- 1109 (1145)
...+.+.+.++..+|||.+.++.+ ..+++|..|.++|||+++| |++||+|++|||.++.+++++++.++|+..++.
T Consensus 8 ~~~~~~~l~~~~~g~G~~~~~~~~--~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~ 84 (98)
T 2jxo_A 8 LRPRLCTMKKGPSGYGFNLHSDKS--KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDET 84 (98)
T ss_dssp SCCEEEEEECTTTCCCEEEECCCS--SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEE
T ss_pred CCcEEEEEEeCCCcccEEEEecCC--CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcE
Confidence 345778898988899999987653 3589999999999999999 999999999999999988899999999987654
Q ss_pred EEEEEEeCCC
Q psy6910 1110 VRLLIKRGGS 1119 (1145)
Q Consensus 1110 v~L~v~R~~~ 1119 (1145)
+.|+|.|++.
T Consensus 85 ~~l~v~R~g~ 94 (98)
T 2jxo_A 85 KLLVVDRETD 94 (98)
T ss_dssp EEEECCHHHH
T ss_pred EEEEEECCch
Confidence 6688888654
No 315
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.07 E-value=4.4e-10 Score=102.11 Aligned_cols=78 Identities=18% Similarity=0.283 Sum_probs=69.4
Q ss_pred EEEe-CCCCCCCceeeeccccCCCceEEEEecCCccccccCCCCCCcEEEeeCCEEecCCCHHHHHHHHHhhcCCCCcEE
Q psy6910 25 VTLT-VPPDGSLNFSVGGGSDSGEFAYVTNINKEKVKGAEKYLEEKAIILEIQGQKVAGYTRRDTIAWLNHCCRSGKTLT 103 (1145)
Q Consensus 25 ~~~~-~~~~g~~~~~i~gg~e~g~~~~v~~i~~~~~~~~sg~l~~GD~i~evng~~v~g~~~~~~~~~l~~~~~~~~~v~ 103 (1145)
+++. +..++.|||.+.+| ++|.+|..|+.|++.|.|++||+|++|||++|.+++.+|+.++|+.+ .+.|+
T Consensus 4 v~l~~~~~~~~~G~~~~~g------v~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~---~~~v~ 74 (88)
T 3e17_A 4 VLLMKSRANEEYGLRLGSQ------IFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKS---RGKLQ 74 (88)
T ss_dssp EEEECBTTBCCCCEEEEEE------EEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHT---TTEEE
T ss_pred EEEEeCCCCCCCCEEEeCC------EEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC---CCeEE
Confidence 3444 46778999999874 88999999999999999999999999999999999999999999999 99999
Q ss_pred EEEecCCc
Q psy6910 104 LRTVSSAY 111 (1145)
Q Consensus 104 ~~~~p~~~ 111 (1145)
|++.|...
T Consensus 75 L~v~~~~~ 82 (88)
T 3e17_A 75 LVVLRDLE 82 (88)
T ss_dssp EEECCC--
T ss_pred EEEeCCCc
Confidence 99998643
No 316
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.07 E-value=4.3e-10 Score=109.08 Aligned_cols=81 Identities=23% Similarity=0.382 Sum_probs=71.0
Q ss_pred EEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEEE
Q psy6910 438 HSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQL 517 (1145)
Q Consensus 438 ~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~l 517 (1145)
.+...+...+|||++.++.+ .+++|..|.++|||+++| |++||+|++|||+.+.++++.+++.+|+....|..|.|
T Consensus 31 ~~~~~~~~~~lG~~l~~~~~---~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l 106 (124)
T 3tsv_A 31 KLVKFRKGDSVGLRLAGGND---VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTI 106 (124)
T ss_dssp EEEEEECSSCCCEEEEECTT---SCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEE
T ss_pred EEEEcCCCCceeEEEecCCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEE
Confidence 33344445799999998755 379999999999999999 99999999999999999999999999987667999999
Q ss_pred EEEeC
Q psy6910 518 EVCRG 522 (1145)
Q Consensus 518 ~v~R~ 522 (1145)
+|.|.
T Consensus 107 ~v~R~ 111 (124)
T 3tsv_A 107 LAQKK 111 (124)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99986
No 317
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.07 E-value=2.6e-10 Score=106.30 Aligned_cols=87 Identities=29% Similarity=0.500 Sum_probs=72.4
Q ss_pred cccEEEEeecC-CcceeEEEEccCCcccccEEEEEEcCCChhccc-CCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCC
Q psy6910 1031 EQYHAIELSRG-TRGFGFSIRGGREFQNMALFVLQIAENGPAALD-GHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDS 1108 (1145)
Q Consensus 1031 ~~~~~v~l~k~-~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~-G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~ 1108 (1145)
.+...+.+... ..+|||++.++.+. ..+++|..|.++|||+++ | |++||+|++|||+++.++ +.+++.+++..+.
T Consensus 8 ~~~~~~~v~~~~~~~~G~~~~gg~~~-~~~v~V~~V~~~spA~~agG-L~~GD~I~~ing~~v~~~-~~~~~~~~~~~~~ 84 (100)
T 2edp_A 8 GSFQYVPVQLQGGAPWGFTLKGGLEH-CEPLTVSKIEDGGKAALSQK-MRTGDELVNINGTPLYGS-RQEALILIKGSFR 84 (100)
T ss_dssp CCCEEEEEECCSCSCCCCCEEEEGGG-TEEEEECCCCTTSHHHHHTS-CCTTCEEEEETTEECCSC-SHHHHHHHHTCCS
T ss_pred CCcEEEEEEECCCCCcCEEEeccCCC-CCCeEEEEECCCCHHHHcCC-CCCCCEEEEECCEEccch-HHHHHHHHHhCCC
Confidence 34444444432 35899999987654 467999999999999999 7 999999999999999986 8999999998888
Q ss_pred eEEEEEEeCCCc
Q psy6910 1109 TVRLLIKRGGSV 1120 (1145)
Q Consensus 1109 ~v~L~v~R~~~~ 1120 (1145)
.+.|+|.|++..
T Consensus 85 ~v~l~v~R~~~~ 96 (100)
T 2edp_A 85 ILKLIVRRRNSG 96 (100)
T ss_dssp SCEEEEEECCCS
T ss_pred eEEEEEEeCCCC
Confidence 899999998753
No 318
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.06 E-value=4.4e-10 Score=106.14 Aligned_cols=82 Identities=18% Similarity=0.253 Sum_probs=71.9
Q ss_pred ceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCe
Q psy6910 435 ERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGET 514 (1145)
Q Consensus 435 ~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~ 514 (1145)
....|.|.|+..||||++.+. .+++|.+|.++|||+++| |++||+|++|||.++.++++.+++++|+.. .+..
T Consensus 23 ~~r~v~l~k~~~~~G~~l~~~-----~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~~-~~~~ 95 (109)
T 2vsv_A 23 MPRSIRFTAEEGDLGFTLRGN-----APVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSF-GEDE 95 (109)
T ss_dssp SCEEEEECCGGGCCCEEEESS-----SSCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTT-TTSC
T ss_pred CCEEEEEEeCCCceeEEEeCC-----CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCCe
Confidence 346799999999999999753 358999999999999999 999999999999999999999999999984 2445
Q ss_pred EEEEEEeCC
Q psy6910 515 VQLEVCRGY 523 (1145)
Q Consensus 515 v~l~v~R~~ 523 (1145)
|.|+|.|..
T Consensus 96 v~l~V~~~~ 104 (109)
T 2vsv_A 96 IEMKVVSLL 104 (109)
T ss_dssp EEEEEESCC
T ss_pred EEEEEEECC
Confidence 999998864
No 319
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.06 E-value=3.7e-10 Score=106.39 Aligned_cols=81 Identities=27% Similarity=0.354 Sum_probs=72.2
Q ss_pred EEEEEEecc-cceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeE
Q psy6910 437 IHSSLVKSL-RGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETV 515 (1145)
Q Consensus 437 ~~v~l~k~~-~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v 515 (1145)
..+.|.|.. .+|||.+.++.+. .+++|..|.++|||+++| |++||+|++|||+++.+++|.+++.+|+. .|..|
T Consensus 3 r~v~l~~~~~~~~G~~l~~~~~~--~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v 77 (106)
T 3ngh_A 3 RESKLSKQEGQNYGFFLRIEKDT--DGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRK--SGNSV 77 (106)
T ss_dssp EEEEEECCTTCCCCCEEECCTTC--CSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHHH--TTTEE
T ss_pred EEEEEEeCCCCeeCEEEEEEeCC--CCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCEE
Confidence 467888876 6899999887543 468999999999999999 99999999999999999999999999996 68899
Q ss_pred EEEEEeC
Q psy6910 516 QLEVCRG 522 (1145)
Q Consensus 516 ~l~v~R~ 522 (1145)
.|+|.|+
T Consensus 78 ~l~v~r~ 84 (106)
T 3ngh_A 78 TLLVLDG 84 (106)
T ss_dssp EEEEECH
T ss_pred EEEEEEC
Confidence 9999886
No 320
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.06 E-value=4.5e-10 Score=108.74 Aligned_cols=85 Identities=22% Similarity=0.334 Sum_probs=75.7
Q ss_pred CcccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHc--CC
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRN--GD 1107 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~--~~ 1107 (1145)
....+.+.+.++..+|||++.+. ..+++|..|.++|||+++|+|++||+|++|||.++.+++|++++++|+. .+
T Consensus 25 ~~~~~~~~l~k~~~glG~~i~~~----~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G 100 (126)
T 1wif_A 25 LNKVIQTKLTVGNLGLGLVVIQN----GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIG 100 (126)
T ss_dssp CCCEEEEEEECCTTCCCCCEEEE----TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSS
T ss_pred CCceEEEEEecCCceEeEEEEcC----CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Confidence 44667888999989999998764 3568999999999999999999999999999999999999999999997 35
Q ss_pred CeEEEEEEeCC
Q psy6910 1108 STVRLLIKRGG 1118 (1145)
Q Consensus 1108 ~~v~L~v~R~~ 1118 (1145)
..|.|+|.|+.
T Consensus 101 ~~v~l~V~R~~ 111 (126)
T 1wif_A 101 TVLQIKAYRGF 111 (126)
T ss_dssp CEEEEEEESSS
T ss_pred CEEEEEEEECC
Confidence 78999999983
No 321
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.06 E-value=8.4e-10 Score=105.98 Aligned_cols=89 Identities=27% Similarity=0.430 Sum_probs=78.1
Q ss_pred cccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeE
Q psy6910 1031 EQYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTV 1110 (1145)
Q Consensus 1031 ~~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v 1110 (1145)
.+.+.|.+.+...+|||.+.++.+ .+++|..|.++++|+++| |++||+|++|||+++.++++.+++.+++..+..+
T Consensus 18 ~~~~~v~l~~~~~~lG~~~~~~~~---~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v 93 (117)
T 1uit_A 18 EEPRHVKVQKGSEPLGISIVSGEK---GGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIGQQCDTI 93 (117)
T ss_dssp CCCEEEEEECSSCCCCEEEEECTT---SCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTTSCCSEE
T ss_pred CCCEEEEEEeCCCCccEEEEccCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 355688898888899999987643 489999999999999999 9999999999999999999999887777778889
Q ss_pred EEEEEeCCCcCCC
Q psy6910 1111 RLLIKRGGSVVAP 1123 (1145)
Q Consensus 1111 ~L~v~R~~~~~~~ 1123 (1145)
.|+|.|++..+..
T Consensus 94 ~l~v~r~~~~~~~ 106 (117)
T 1uit_A 94 TILAQYNPHVHQL 106 (117)
T ss_dssp EEEECCCSCCCCC
T ss_pred EEEEEECCchhhh
Confidence 9999998876654
No 322
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.06 E-value=1.1e-10 Score=109.38 Aligned_cols=86 Identities=24% Similarity=0.304 Sum_probs=74.9
Q ss_pred cceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCC
Q psy6910 434 GERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGE 513 (1145)
Q Consensus 434 g~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~ 513 (1145)
|+.+++.+. ...+|||++.+|.+. ..+++|.+|.+++||+++| |++||+|++|||+.+.++++.+++++|+.. |.
T Consensus 4 g~~~~v~~~-~~~~lG~~l~~g~~~-~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~--g~ 78 (103)
T 1v5l_A 4 GSSGNVVLP-GPAPWGFRLSGGIDF-NQPLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAA--SY 78 (103)
T ss_dssp CCCBCCEEE-SSSCCSBCCEEETTT-TEEEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTC--CS
T ss_pred CCEEEEEEc-CCCCcCEEEeccccC-CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC--CC
Confidence 445556554 556899999998765 5679999999999999999 999999999999999999999999999984 88
Q ss_pred eEEEEEEeCCC
Q psy6910 514 TVQLEVCRGYP 524 (1145)
Q Consensus 514 ~v~l~v~R~~~ 524 (1145)
.|.|+|.|+-.
T Consensus 79 ~v~l~v~R~g~ 89 (103)
T 1v5l_A 79 QLCLKIDRAET 89 (103)
T ss_dssp EEECEECCCTT
T ss_pred eEEEEEEECCe
Confidence 99999998743
No 323
>1e0m_A Wwprototype; SH3 prototype, protein design, de novo protein; NMR {} SCOP: k.22.1.1
Probab=99.05 E-value=1e-10 Score=87.62 Aligned_cols=34 Identities=44% Similarity=1.010 Sum_probs=32.0
Q ss_pred CCCCCCcEEEEccCCceEeeeCCCCceeccCCcc
Q psy6910 294 GPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRL 327 (1145)
Q Consensus 294 ~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~ 327 (1145)
.+||+||+++.+.+|++||+||+|++|+|++|+.
T Consensus 2 ~~LP~gW~~~~~~~G~~Yy~n~~t~~t~W~~P~~ 35 (37)
T 1e0m_A 2 MGLPPGWDEYKTHNGKTYYYNHNTKTSTWTDPRM 35 (37)
T ss_dssp CCSCTTEEEEECSSCCEEEEETTTTEEESSCTTT
T ss_pred CCCCCCcEEEECCCCCEEEEECCCCCeeeeCcCC
Confidence 3699999999999999999999999999999974
No 324
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.05 E-value=5.1e-10 Score=117.36 Aligned_cols=87 Identities=39% Similarity=0.682 Sum_probs=78.5
Q ss_pred CcccEEEEeecC-CcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCC
Q psy6910 1030 DEQYHAIELSRG-TRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDS 1108 (1145)
Q Consensus 1030 ~~~~~~v~l~k~-~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~ 1108 (1145)
....+.|.+.+. ..+|||++.++.+. ..+++|..|.++|+|+++| |++||+|++|||.++.+++|.+++.+|+. +.
T Consensus 82 ~~~~~~v~l~k~~~~~lG~~i~~~~~~-~~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~~ 158 (192)
T 3k1r_A 82 SRKLKEVRLDRLHPEGLGLSVRGGLEF-GCGLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLIRT-EK 158 (192)
T ss_dssp CSSCEEEEEETTSTTCCCEEEEEEGGG-TEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHTS-SS
T ss_pred CCceEEEEEEeCCCCceeEEEEccccc-CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHcC-CC
Confidence 345788999887 56999999987654 5689999999999999999 99999999999999999999999999999 88
Q ss_pred eEEEEEEeCCC
Q psy6910 1109 TVRLLIKRGGS 1119 (1145)
Q Consensus 1109 ~v~L~v~R~~~ 1119 (1145)
.+.|+|.|++.
T Consensus 159 ~v~l~v~r~g~ 169 (192)
T 3k1r_A 159 TVSIKVRHIGL 169 (192)
T ss_dssp EEEEEEEECCE
T ss_pred eEEEEEEECCc
Confidence 89999999876
No 325
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.04 E-value=3e-10 Score=105.83 Aligned_cols=84 Identities=27% Similarity=0.401 Sum_probs=74.9
Q ss_pred CcccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCe
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDST 1109 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~ 1109 (1145)
..+.+.+.+.+...+|||.+... .+++|..|.++++|+++| |++||+|++|||+++.++++.+++++|+..++.
T Consensus 13 ~~~~~~v~l~~~~~g~G~~~~~~-----~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~ 86 (100)
T 1whd_A 13 NGEKLQITIRRGKDGFGFTICCD-----SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSE 86 (100)
T ss_dssp CCEEEEEEEECCSSSSSCBCCCS-----SSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHHHHCSSE
T ss_pred ccceEEEEEECCCCeeeEEEeCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 45567788888888999988663 478999999999999999 999999999999999999999999999988888
Q ss_pred EEEEEEeCCC
Q psy6910 1110 VRLLIKRGGS 1119 (1145)
Q Consensus 1110 v~L~v~R~~~ 1119 (1145)
+.|+|.|+..
T Consensus 87 v~l~v~R~~~ 96 (100)
T 1whd_A 87 IILLVWRVSG 96 (100)
T ss_dssp EEEEEEECCS
T ss_pred EEEEEEECCC
Confidence 9999999764
No 326
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.04 E-value=2.7e-10 Score=105.30 Aligned_cols=84 Identities=23% Similarity=0.497 Sum_probs=73.8
Q ss_pred CcccEEEEeecCC--cceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCC
Q psy6910 1030 DEQYHAIELSRGT--RGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGD 1107 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~--~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~ 1107 (1145)
....+++.|.+.. .+|||.+.+ ..+++|..|.++|+|+ +| |++||+|++|||+++.++++.+++.+++..+
T Consensus 6 ~~~~~~v~l~~~~~~~~~G~~l~~-----~~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~~v~~~~~~~~~~~~~~~g 78 (96)
T 2edv_A 6 SGVRHTVKIDKDTLLQDYGFHISE-----SLPLTVVAVTAGGSAH-GK-LFPGDQILQMNNEPAEDLSWERAVDILREAE 78 (96)
T ss_dssp SCEEEEEEECCCSSSCSCSBCCCS-----SSSCBCCCBCSSSSST-TT-SCTTCBEEEESSCBSTTCCHHHHHHHHHHCS
T ss_pred CCccEEEEEEECCCCCcccEEEec-----CCCeEEEEECCCCchh-hC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 3456888998876 479999876 4579999999999995 78 9999999999999999999999999999988
Q ss_pred CeEEEEEEeCCCc
Q psy6910 1108 STVRLLIKRGGSV 1120 (1145)
Q Consensus 1108 ~~v~L~v~R~~~~ 1120 (1145)
..+.|+|.|+...
T Consensus 79 ~~v~l~v~R~~~~ 91 (96)
T 2edv_A 79 DSLSITVVRCTSS 91 (96)
T ss_dssp SCEEEEEEECCCC
T ss_pred CeEEEEEEECCCC
Confidence 8999999998743
No 327
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=4e-10 Score=105.19 Aligned_cols=89 Identities=30% Similarity=0.586 Sum_probs=74.9
Q ss_pred CcccEEEEeec--CCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCC
Q psy6910 1030 DEQYHAIELSR--GTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGD 1107 (1145)
Q Consensus 1030 ~~~~~~v~l~k--~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~ 1107 (1145)
..+++.+.+.+ ...+|||.+.+..+. ..+++|..|.++++|+++| |++||+|++|||+++.++++.+++..++..
T Consensus 6 ~~~~~~v~l~~~~~~~~lG~~~~~~~~~-~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~- 82 (101)
T 1uez_A 6 SGEVRLVSLRRAKAHEGLGFSIRGGSEH-GVGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKALKGS- 82 (101)
T ss_dssp SCCCEEECCCCCCTTTCSSEEEEECTTT-TCCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHHSSSS-
T ss_pred CCccEEEEEEECCCCCcccEEEeCCCCC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHhhcCC-
Confidence 45677888877 345899999987654 5689999999999999999 999999999999999999998888777654
Q ss_pred CeEEEEEEeCCCcC
Q psy6910 1108 STVRLLIKRGGSVV 1121 (1145)
Q Consensus 1108 ~~v~L~v~R~~~~~ 1121 (1145)
..+.|+|.|++...
T Consensus 83 ~~v~l~v~R~g~~p 96 (101)
T 1uez_A 83 KKLVLSVYSAGRIS 96 (101)
T ss_dssp SSCCEEECCCCCCS
T ss_pred CeEEEEEEECCccC
Confidence 57999999887643
No 328
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=5.1e-10 Score=107.50 Aligned_cols=83 Identities=22% Similarity=0.252 Sum_probs=74.6
Q ss_pred cceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCC
Q psy6910 434 GERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGE 513 (1145)
Q Consensus 434 g~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~ 513 (1145)
++...|.+.+...+|||++.++.+. +++|..|.+++||+++| |++||+|++|||+.+.++++.+++.+++. .|.
T Consensus 18 ~~~~~v~l~~~~~~lG~~~~~~~~~---gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~--~g~ 91 (117)
T 1uit_A 18 EEPRHVKVQKGSEPLGISIVSGEKG---GIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIGQ--QCD 91 (117)
T ss_dssp CCCEEEEEECSSCCCCEEEEECTTS---CEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTTS--CCS
T ss_pred CCCEEEEEEeCCCCccEEEEccCCC---CEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc--CCC
Confidence 3556889999989999999987543 79999999999999999 99999999999999999999999977776 688
Q ss_pred eEEEEEEeC
Q psy6910 514 TVQLEVCRG 522 (1145)
Q Consensus 514 ~v~l~v~R~ 522 (1145)
.|.|+|.|+
T Consensus 92 ~v~l~v~r~ 100 (117)
T 1uit_A 92 TITILAQYN 100 (117)
T ss_dssp EEEEEECCC
T ss_pred eEEEEEEEC
Confidence 999999886
No 329
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.04 E-value=8e-11 Score=114.73 Aligned_cols=84 Identities=29% Similarity=0.406 Sum_probs=73.1
Q ss_pred EEEEEEecccceeEEEecCC-----------------------CC----CCccEEEEEeccCCcccccCCCCCCCEEEEE
Q psy6910 437 IHSSLVKSLRGLGFTIVGGD-----------------------DS----KEEFLQIKSVVPNGPAALEGHLQTGDVLVYV 489 (1145)
Q Consensus 437 ~~v~l~k~~~glG~~i~gg~-----------------------~~----~~~~i~V~~v~~~g~A~~~g~l~~GD~il~v 489 (1145)
..|.|.|+..||||+|.+.. .. ...+++|..|.+++||+++| |++||+|++|
T Consensus 10 r~v~l~r~~~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~i 88 (126)
T 2yuy_A 10 KTVTLKRTSQGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAG-LCTGDRIIKV 88 (126)
T ss_dssp CCEEEECCSSSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHT-CCSSCCCCEE
T ss_pred EEEEEEECCCCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcC-CCCCCEEEEE
Confidence 46889999999999998621 00 13569999999999999999 9999999999
Q ss_pred CCEEcCCCCHHHHHHHHhcCCCCCeEEEEEEeCC
Q psy6910 490 NDKCVLGYTHHDMVSVFQSISPGETVQLEVCRGY 523 (1145)
Q Consensus 490 Ng~~~~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 523 (1145)
||+++.++++.+++++|+. .|..|.|+|.|.-
T Consensus 89 ng~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~ 120 (126)
T 2yuy_A 89 NGESVIGKTYSQVIALIQN--SDTTLELSVMPKD 120 (126)
T ss_dssp TTEECSSCCHHHHHHHHHT--CTTEEEEECCCCC
T ss_pred CCEECCCCCHHHHHHHHHc--CCCEEEEEEEECC
Confidence 9999999999999999998 4899999998863
No 330
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.03 E-value=1.1e-09 Score=106.15 Aligned_cols=89 Identities=34% Similarity=0.587 Sum_probs=75.5
Q ss_pred cccEEEEeecCC-cceeEEEEccCCc--------ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHH
Q psy6910 1031 EQYHAIELSRGT-RGFGFSIRGGREF--------QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIE 1101 (1145)
Q Consensus 1031 ~~~~~v~l~k~~-~~lG~sl~gg~~~--------~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~ 1101 (1145)
...+.+.+.+.. ..|||++.++.+. ...+++|..|.++|||+++|+|++||+|++|||.++.+++++++++
T Consensus 23 ~~p~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~ 102 (123)
T 2iwq_A 23 MQPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVE 102 (123)
T ss_dssp CCCEEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CCCEEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 345778887764 5799999875432 1358999999999999999999999999999999999999999999
Q ss_pred HHHcCCCeEEEEEEeCCC
Q psy6910 1102 IIRNGDSTVRLLIKRGGS 1119 (1145)
Q Consensus 1102 ~lk~~~~~v~L~v~R~~~ 1119 (1145)
+|+..++.+.|+|.|...
T Consensus 103 ~l~~~~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 103 AIRKAGNPVVFMVQSIIS 120 (123)
T ss_dssp HHHHCCSSEEEEEECCCC
T ss_pred HHHcCCCeEEEEEEECCc
Confidence 999988899999998654
No 331
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.03 E-value=1.3e-10 Score=113.25 Aligned_cols=89 Identities=33% Similarity=0.506 Sum_probs=76.6
Q ss_pred cccEEEEeecCCcceeEEEEccCCc---------------------------ccccEEEEEEcCCChhcccCCCCCCCEE
Q psy6910 1031 EQYHAIELSRGTRGFGFSIRGGREF---------------------------QNMALFVLQIAENGPAALDGHLKVGDEI 1083 (1145)
Q Consensus 1031 ~~~~~v~l~k~~~~lG~sl~gg~~~---------------------------~~~~v~V~~V~~gg~A~~~G~L~~GD~I 1083 (1145)
...+.|.|.|+..+|||+|.+...+ ...+++|..|.+++||+++| |++||+|
T Consensus 7 ~~~r~v~l~r~~~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I 85 (126)
T 2yuy_A 7 GGPKTVTLKRTSQGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAG-LCTGDRI 85 (126)
T ss_dssp SSCCCEEEECCSSSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHT-CCSSCCC
T ss_pred CCCEEEEEEECCCCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcC-CCCCCEE
Confidence 4457899999888999999752110 12468999999999999999 9999999
Q ss_pred EEECCEEcCCCCHHHHHHHHHcCCCeEEEEEEeCCCc
Q psy6910 1084 VEINGINTKNMTHAEAIEIIRNGDSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1084 l~ING~~v~~~s~~eav~~lk~~~~~v~L~v~R~~~~ 1120 (1145)
++|||+++.++++++++++|+..+..+.|+|.|.+..
T Consensus 86 ~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~~ 122 (126)
T 2yuy_A 86 IKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKDSG 122 (126)
T ss_dssp CEETTEECSSCCHHHHHHHHHTCTTEEEEECCCCCCC
T ss_pred EEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCCC
Confidence 9999999999999999999999888999999988753
No 332
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=99.03 E-value=5e-11 Score=141.17 Aligned_cols=155 Identities=18% Similarity=0.251 Sum_probs=53.7
Q ss_pred CCceEEEEeCCCChhhhcCCCCCCCEEEEECCEecCCCCHHHHHHHHHhccCCCeEEEEEeeccCCCCcccccCCCCCeE
Q psy6910 843 GSQVSIGHIVPGGAADLDGRLCTGDEIVSVDNLSVLNSSHHHVVELMGKASVYGRVTLGIRRKVMPPAETTSMMLGYPYD 922 (1145)
Q Consensus 843 ~~~i~V~~V~pgs~A~~~G~L~~GD~IlsVNG~~v~~~s~~~~~~~L~~~~~~~~v~L~v~r~~~~~~~~~~~~~~~~~~ 922 (1145)
..+++|..|.+++||+++| |++||+|++|||..+.+ +.++..++.....+..+.|+|.|.+......-.+.......
T Consensus 285 ~~G~~V~~V~~gspA~~AG-L~~GDvI~~inG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~~~ 361 (448)
T 1ky9_A 285 QRGAFVSQVLPNSSAAKAG-IKAGDVITSLNGKPISS--FAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQ 361 (448)
T ss_dssp CCSEECCCCTTCSSSTTTT-CCTTCEECBSSSSBCCS--SHHHHHHTTSSBTTCCCEEEEESSSCEEECCCC--------
T ss_pred CCceEEEEeccCCHHHHcC-CCCCCEEEEECCEEcCC--HHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEEecCCCcc
Confidence 3578999999999999999 99999999999999995 46777777765456789999998764311100000000000
Q ss_pred EEEeccCCCcccEEEeecCCCCCceEEEeCCCCcccccCCCCCCCEEEEECCeeecccCHHHHHHHHHcCCCEEEEEEeC
Q psy6910 923 VTITRRENEGFGFVIISSLNKAGSTIGRIIEDSPADRSGELHLGDHILAVNHVDIMSLHHGEIVNLIKDSGYCVTLTIGA 1002 (1145)
Q Consensus 923 V~l~r~~~~~lG~~l~~~~~~~g~~I~~v~~gs~A~~~G~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~L~v~r 1002 (1145)
+........-+|+.+.......+++|..|.++|+|+++| |+.||+|++|||+++.+ ..++..+++.....+.|.|.|
T Consensus 362 ~~~~~~~~~~~G~~l~~~~~~~gv~V~~V~~gspA~~aG-L~~GDiI~~vng~~v~~--~~~l~~~l~~~~~~v~l~v~R 438 (448)
T 1ky9_A 362 VDSSSIFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIG-LKKGDVIIGANQQAVKN--IAELRKVLDSKPSVLALNIQR 438 (448)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccceEeeccCCCCeEEEEEecCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHcCCCeEEEEEEE
Confidence 000000112246665422223578999999999999999 99999999999999975 456677777655578888876
Q ss_pred C
Q psy6910 1003 P 1003 (1145)
Q Consensus 1003 ~ 1003 (1145)
.
T Consensus 439 ~ 439 (448)
T 1ky9_A 439 G 439 (448)
T ss_dssp -
T ss_pred C
Confidence 4
No 333
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.03 E-value=5.2e-10 Score=106.59 Aligned_cols=91 Identities=24% Similarity=0.378 Sum_probs=75.9
Q ss_pred CcccEEEEeecCCc---ceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcC
Q psy6910 1030 DEQYHAIELSRGTR---GFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNG 1106 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~---~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~ 1106 (1145)
....+.+.|.+... +|||+|.+..+.+..+++|..|.++++|+++| |++||+|++|||.++.+++|.++.++|+..
T Consensus 13 ~~~~~~v~l~k~~~~~~~~G~~v~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 91 (114)
T 2d8i_A 13 PKVTQSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQP 91 (114)
T ss_dssp CCEEEEEEEECSCTTTCCCCCEEEEEEETTEEEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHHHHHHTSS
T ss_pred cCceEEEEEEeCCCCccccCEEEEecCcCCcCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhCC
Confidence 34568899988765 69999987443212579999999999999999 999999999999999999999999999863
Q ss_pred CCeEEEEEEeCCCcCCC
Q psy6910 1107 DSTVRLLIKRGGSVVAP 1123 (1145)
Q Consensus 1107 ~~~v~L~v~R~~~~~~~ 1123 (1145)
.+.|+|.|.....+.
T Consensus 92 --~v~l~v~R~p~~~~~ 106 (114)
T 2d8i_A 92 --SLGLLVRTYPELEEG 106 (114)
T ss_dssp --EEEEEEEECCCSCCS
T ss_pred --cEEEEEEECCCCCcc
Confidence 899999997755433
No 334
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.02 E-value=7.1e-10 Score=101.09 Aligned_cols=74 Identities=19% Similarity=0.344 Sum_probs=64.5
Q ss_pred EEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEE
Q psy6910 437 IHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQ 516 (1145)
Q Consensus 437 ~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~ 516 (1145)
..+...+...+|||.+.+| +|.+|.++|||+++| |++||+|++|||.++.++++.+++++|+. .|..|.
T Consensus 15 ~~i~~~~~~~~lG~~~~~G--------~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~--~g~~v~ 83 (90)
T 1y7n_A 15 VLIRRPDLRYQLGFSVQNG--------IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSN--AVGEIH 83 (90)
T ss_dssp EEEEESSTTSCCCEEEETT--------EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHH--CCEEEE
T ss_pred EEEEeCCCccccCeEecCC--------EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEE
Confidence 3444444567899999654 899999999999999 99999999999999999999999999997 588999
Q ss_pred EEEEe
Q psy6910 517 LEVCR 521 (1145)
Q Consensus 517 l~v~R 521 (1145)
|+|.+
T Consensus 84 l~v~p 88 (90)
T 1y7n_A 84 MKTMP 88 (90)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 99875
No 335
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.02 E-value=1.1e-09 Score=99.99 Aligned_cols=82 Identities=28% Similarity=0.474 Sum_probs=68.3
Q ss_pred ccEEEEeecCCc---ceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCC
Q psy6910 1032 QYHAIELSRGTR---GFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDS 1108 (1145)
Q Consensus 1032 ~~~~v~l~k~~~---~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~ 1108 (1145)
..+.+.+.|... +|||++......+..+++|..|.++|||+++| |++||+|++|||+++.+++++++.+++++ .
T Consensus 6 ~~~~v~i~k~~~~~~~~Gf~v~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~~l~~--~ 82 (94)
T 3kzd_A 6 VTHSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ--P 82 (94)
T ss_dssp EEEEEEEEC------CCSEEEEEECSSSSCEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHS--S
T ss_pred ceeEEEEEeCCCCcCCcCEEEEecCCCCcCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC--C
Confidence 457788888764 79999987544335689999999999999999 99999999999999999999999999984 5
Q ss_pred eEEEEEEe
Q psy6910 1109 TVRLLIKR 1116 (1145)
Q Consensus 1109 ~v~L~v~R 1116 (1145)
.++|+|+.
T Consensus 83 ~l~ltV~~ 90 (94)
T 3kzd_A 83 SLGLLVRT 90 (94)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEe
Confidence 68888875
No 336
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.02 E-value=9.1e-10 Score=109.00 Aligned_cols=90 Identities=30% Similarity=0.570 Sum_probs=74.7
Q ss_pred CcccEEEEeecCC----cceeEEEEccCCc-----------ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCC
Q psy6910 1030 DEQYHAIELSRGT----RGFGFSIRGGREF-----------QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNM 1094 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~----~~lG~sl~gg~~~-----------~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~ 1094 (1145)
....+.|.|.+.. ..|||++.++.+. ...+++|..|.++|||+++| |++||+|++|||.++.++
T Consensus 21 ~~~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~ 99 (139)
T 2vz5_A 21 QSMVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMV 99 (139)
T ss_dssp -CEEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTC
T ss_pred CCceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcCCC
Confidence 4566788887743 2799999876541 14689999999999999999 999999999999999999
Q ss_pred CHHHHHHHHHcC-CCeEEEEEEeCCCc
Q psy6910 1095 THAEAIEIIRNG-DSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1095 s~~eav~~lk~~-~~~v~L~v~R~~~~ 1120 (1145)
++.+++++|+.. +..+.|+|.|++..
T Consensus 100 ~~~~~~~~l~~~~g~~v~l~v~R~g~~ 126 (139)
T 2vz5_A 100 THDQARKRLTKRSEEVVRLLVTRQSLQ 126 (139)
T ss_dssp CHHHHHHHHCCTTCSEEEEEEEECC--
T ss_pred CHHHHHHHHHhCCCCEEEEEEEECCEE
Confidence 999999999974 46799999998864
No 337
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.02 E-value=3.4e-10 Score=106.12 Aligned_cols=85 Identities=33% Similarity=0.535 Sum_probs=73.5
Q ss_pred EEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEEEE
Q psy6910 1034 HAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVRLL 1113 (1145)
Q Consensus 1034 ~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~L~ 1113 (1145)
+++.+. +...|||++.++.+. ..+++|..|.+++||+++| |++||+|++|||+++.++++.+++++|+..+..+.|+
T Consensus 7 ~~v~~~-~~~~lG~~l~~g~~~-~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~ 83 (103)
T 1v5l_A 7 GNVVLP-GPAPWGFRLSGGIDF-NQPLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLK 83 (103)
T ss_dssp BCCEEE-SSSCCSBCCEEETTT-TEEEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTCCSEEECE
T ss_pred EEEEEc-CCCCcCEEEeccccC-CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEE
Confidence 444443 456899999887654 4589999999999999999 9999999999999999888999999999888889999
Q ss_pred EEeCCCcC
Q psy6910 1114 IKRGGSVV 1121 (1145)
Q Consensus 1114 v~R~~~~~ 1121 (1145)
|.|++..+
T Consensus 84 v~R~g~~~ 91 (103)
T 1v5l_A 84 IDRAETRL 91 (103)
T ss_dssp ECCCTTTT
T ss_pred EEECCeEc
Confidence 99988653
No 338
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.02 E-value=2.9e-10 Score=105.14 Aligned_cols=81 Identities=21% Similarity=0.318 Sum_probs=71.5
Q ss_pred cceEEEEEEecc--cceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy6910 434 GERIHSSLVKSL--RGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISP 511 (1145)
Q Consensus 434 g~~~~v~l~k~~--~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~ 511 (1145)
...++|.|.+.. .+|||.|.+ ..+++|.+|.++|||+ .| |++||+|++|||+++.++++.+++.+++. .
T Consensus 7 ~~~~~v~l~~~~~~~~~G~~l~~-----~~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~~v~~~~~~~~~~~~~~--~ 77 (96)
T 2edv_A 7 GVRHTVKIDKDTLLQDYGFHISE-----SLPLTVVAVTAGGSAH-GK-LFPGDQILQMNNEPAEDLSWERAVDILRE--A 77 (96)
T ss_dssp CEEEEEEECCCSSSCSCSBCCCS-----SSSCBCCCBCSSSSST-TT-SCTTCBEEEESSCBSTTCCHHHHHHHHHH--C
T ss_pred CccEEEEEEECCCCCcccEEEec-----CCCeEEEEECCCCchh-hC-CCCCCEEEEECCEECCCCCHHHHHHHHHc--C
Confidence 446789999987 589999987 2469999999999995 45 99999999999999999999999999998 5
Q ss_pred CCeEEEEEEeCC
Q psy6910 512 GETVQLEVCRGY 523 (1145)
Q Consensus 512 g~~v~l~v~R~~ 523 (1145)
|+.|.|+|.|..
T Consensus 78 g~~v~l~v~R~~ 89 (96)
T 2edv_A 78 EDSLSITVVRCT 89 (96)
T ss_dssp SSCEEEEEEECC
T ss_pred CCeEEEEEEECC
Confidence 889999999974
No 339
>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A
Probab=99.02 E-value=1.6e-11 Score=136.57 Aligned_cols=117 Identities=8% Similarity=-0.061 Sum_probs=81.1
Q ss_pred HHhhhhccCcceeecccccCCCCCCCcCCccE--EEeCHHHHHHHHHcCCEEEEEEeCCcccCCCccchhhhhcCCCCce
Q psy6910 132 DLQNIIRDNLYLRTVPVTTRTPRDGELNGVDY--TFLSIEEFKQLEKSGCLLESGLYEGNHYGTPKPVKEPYVSLPQNVN 209 (1145)
Q Consensus 132 ~l~~~~~~~~~~~~v~~TTR~~r~~E~~g~~Y--~fvs~~~f~~~~~~~~flE~~~~~g~~YGt~~~~i~~~~~~g~~~~ 209 (1145)
+|... .+..|...|++| |.++.-+..++.| +|++++.|+..+..+.|+| |++..+.|.++.++|+ +
T Consensus 164 ~l~d~-l~~~F~~~i~~t-R~~~d~~~~~r~~~~~~~~~~~~e~~~~~~~~~e--------v~seVe~i~~v~~~Gk--~ 231 (337)
T 4dey_A 164 ALFDF-LKHRFEGRISIT-RVTADISLAKRSVLNNPSKHAIIERSNTRSSLAE--------VQSEIERIFELARTLQ--L 231 (337)
T ss_dssp HHHHH-HHHHTTTSEEEE-EECSCGGGC-------------------CCCHHH--------HHHHHHHHHHHTTTCC--E
T ss_pred HHHHh-hHHhcCCccceE-eecchhhhcchhhhhcccchhhhcccccccchHH--------HHhHHHHHHHHHhCCC--E
Confidence 34444 356677778655 9998888888886 7889999999999998887 6677777888888877 9
Q ss_pred eeecCCCChh-hhhhhhcccccccceeEecCCChhhhhhhhhccCCCCccccccc
Q psy6910 210 LLPGAHPSSE-GKRKRNRSNVEAMASKSIEPDMKTNGFDNKTVNMGNSSDYELND 263 (1145)
Q Consensus 210 ~il~~~~~~~-~~~~~~~~~~~~~~~ifi~pps~~~l~~rl~~rg~~s~~~i~~~ 263 (1145)
||||||+ + |++++++.+++++ +|||.|||+++|++||+.||+++.+.++++
T Consensus 232 vILDIDv--QnGa~qlk~~~~~~i-~IFI~PPS~eeLe~RL~~RGt~~~~rl~~a 283 (337)
T 4dey_A 232 VVLDADT--INHPAQLSKTSLAPI-VVYVKISSPKVLQRLIKSRGKSQAKHLNVQ 283 (337)
T ss_dssp EEEEETT--CCSGGGTTTSSCCCE-EEEECCSCHHHHHHHHHTTCHHHHTTHHHH
T ss_pred EEEEeCc--HHHHHHHHhcCCCCE-EEEEECcCHHHHHHHHHhCCchHHHHHHHH
Confidence 9999998 5 7788899999999 999999999999999999998655555544
No 340
>2ysd_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=99.02 E-value=3.4e-10 Score=92.39 Aligned_cols=40 Identities=30% Similarity=0.419 Sum_probs=36.1
Q ss_pred CCCCCCCCCceeeeCCCCceEEEeCCCceeeCcCCccccc
Q psy6910 337 CSDDELPYGWERIDDPAYGTYYIDHVNKQTQYENPVLQAK 376 (1145)
Q Consensus 337 ~~~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~~~ 376 (1145)
....+||+|||++.+.+|++|||||.|++|+|+||++...
T Consensus 10 ~~~~~LP~GWe~~~~~~Gr~Yyinh~tk~TtWe~Pr~~~~ 49 (57)
T 2ysd_A 10 DNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNK 49 (57)
T ss_dssp SCCCSCCSSEEEEECSSCCEEEEETTTTEEESSCTTTCSS
T ss_pred CCCCCCCcCcEEEECCCCCEEEEECCCCcEecCCCCCccc
Confidence 3456899999999999999999999999999999998654
No 341
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=99.01 E-value=8e-10 Score=107.92 Aligned_cols=83 Identities=33% Similarity=0.410 Sum_probs=74.9
Q ss_pred eEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeE
Q psy6910 436 RIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETV 515 (1145)
Q Consensus 436 ~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v 515 (1145)
...+.|.++..||||++.++.+. .+++|.+|.++|||+++| |++||+|++|||..+.++++.++..+|+.. .|..+
T Consensus 10 ~r~v~l~~~~~g~G~~l~~~~~~--~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~~~ 85 (128)
T 2kjd_A 10 PRLCTMKKGPSGYGFNLHSDKSK--PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAG-GDETK 85 (128)
T ss_dssp CEEEEEECCSSSCCEEEEECSSS--CSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTT-CSEEE
T ss_pred cEEEEEecCCCcccEEEEecCCC--CCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCCEE
Confidence 45688999999999999987543 479999999999999999 999999999999999999999999999997 57788
Q ss_pred EEEEEeC
Q psy6910 516 QLEVCRG 522 (1145)
Q Consensus 516 ~l~v~R~ 522 (1145)
.|+|.|+
T Consensus 86 ~l~v~R~ 92 (128)
T 2kjd_A 86 LLVVDRE 92 (128)
T ss_dssp EEEECHH
T ss_pred EEEEEeC
Confidence 8999886
No 342
>3l4h_A E3 ubiquitin-protein ligase HECW1; E3 ligase, WW domain, UBL-conjugation pathway, structural GE structural genomics consortium, SGC, coiled coil; HET: MSE; 1.80A {Homo sapiens}
Probab=99.00 E-value=2e-10 Score=105.22 Aligned_cols=38 Identities=34% Similarity=0.705 Sum_probs=35.1
Q ss_pred cCCCCCCCCcEEEEccCCceEeeeCCCCceeccCCcch
Q psy6910 291 LDLGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRLC 328 (1145)
Q Consensus 291 ~~~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~~ 328 (1145)
+..++||+|||++++++|++|||||+|++|+|+|||..
T Consensus 68 d~~~pLP~GWE~r~d~~Gr~YfIdH~tktTtW~dPRl~ 105 (109)
T 3l4h_A 68 DTRLELPRGWEIKTDQQGKSFFVDHNSRATTFIDPRIP 105 (109)
T ss_dssp CTTSCCCTTEEEEECTTCCEEEEETTTTEEESSCSCCS
T ss_pred CCCCCCCCCCeEEECCCCCEEEEeCCCCCEeeCCCCcc
Confidence 44678999999999999999999999999999999864
No 343
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.00 E-value=1.6e-09 Score=101.66 Aligned_cols=73 Identities=36% Similarity=0.695 Sum_probs=64.4
Q ss_pred ceeEEEEccCCc-----------ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcC-CCeEE
Q psy6910 1044 GFGFSIRGGREF-----------QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNG-DSTVR 1111 (1145)
Q Consensus 1044 ~lG~sl~gg~~~-----------~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~-~~~v~ 1111 (1145)
+|||++.++.+. ...+++|..|.++|||+++| |++||+|++|||.++.+++|++++.+|+.. +..+.
T Consensus 20 ~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~ 98 (104)
T 3sfj_A 20 ILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVR 98 (104)
T ss_dssp ECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHTCTTCSEEE
T ss_pred cccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEE
Confidence 699999966542 24679999999999999999 999999999999999999999999999864 46799
Q ss_pred EEEEeC
Q psy6910 1112 LLIKRG 1117 (1145)
Q Consensus 1112 L~v~R~ 1117 (1145)
|+|.|.
T Consensus 99 l~v~R~ 104 (104)
T 3sfj_A 99 LLVTRQ 104 (104)
T ss_dssp EEEEEC
T ss_pred EEEEcC
Confidence 999874
No 344
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.99 E-value=4.7e-10 Score=106.96 Aligned_cols=90 Identities=32% Similarity=0.601 Sum_probs=80.1
Q ss_pred CcccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCe
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDST 1109 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~ 1109 (1145)
....+.|.|.+...+|||++.++.+ ..+++|..|.++++|+++|+|++||+|++|||+++.++++.+++.+++..+..
T Consensus 13 ~~~~~~v~l~k~~~glG~~l~~~~~--~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~~~~ 90 (113)
T 1um7_A 13 AREPRKIILHKGSTGLGFNIVGGED--GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQS 90 (113)
T ss_dssp CCSEEEEEEECCSSCSSBCCBCCST--TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSCCSE
T ss_pred CCceEEEEEEECCCcccEEEEeccC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 4567889999988899999987654 35899999999999999999999999999999999999999999999988889
Q ss_pred EEEEEEeCCCcC
Q psy6910 1110 VRLLIKRGGSVV 1121 (1145)
Q Consensus 1110 v~L~v~R~~~~~ 1121 (1145)
+.|+|.|++..+
T Consensus 91 v~l~v~r~~~~~ 102 (113)
T 1um7_A 91 VTIVAQYRPEEY 102 (113)
T ss_dssp EEEEEECCHHHH
T ss_pred EEEEEEECcchh
Confidence 999999876543
No 345
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.99 E-value=2e-09 Score=98.07 Aligned_cols=75 Identities=23% Similarity=0.395 Sum_probs=64.1
Q ss_pred EEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEEEE
Q psy6910 1034 HAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVRLL 1113 (1145)
Q Consensus 1034 ~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~L~ 1113 (1145)
..+...+...+|||.+.+ + +|.+|.++|+|+++| |++||+|++|||.++.++++.+++++|+..+..+.|+
T Consensus 15 ~~i~~~~~~~~lG~~~~~-------G-~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~l~ 85 (90)
T 1y7n_A 15 VLIRRPDLRYQLGFSVQN-------G-IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMK 85 (90)
T ss_dssp EEEEESSTTSCCCEEEET-------T-EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHHCCEEEEEE
T ss_pred EEEEeCCCccccCeEecC-------C-EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 334444445689999854 2 899999999999999 9999999999999999999999999999888889999
Q ss_pred EEeC
Q psy6910 1114 IKRG 1117 (1145)
Q Consensus 1114 v~R~ 1117 (1145)
|.+.
T Consensus 86 v~p~ 89 (90)
T 1y7n_A 86 TMPA 89 (90)
T ss_dssp EECC
T ss_pred EEEC
Confidence 8764
No 346
>2ysh_A GAS-7, growth-arrest-specific protein 7; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=98.99 E-value=3.1e-10 Score=86.40 Aligned_cols=35 Identities=23% Similarity=0.727 Sum_probs=32.5
Q ss_pred CCCCCCCcEEEEccCCceEeeeCCCCceeccCCcc
Q psy6910 293 LGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRL 327 (1145)
Q Consensus 293 ~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~ 327 (1145)
..+||+||+++++.+|++||+||+|++|+|++|+.
T Consensus 5 ~~~LP~gW~~~~d~~Gr~YY~n~~T~~t~We~P~~ 39 (40)
T 2ysh_A 5 SSGLPPGWQSYLSPQGRRYYVNTTTNETTWERPSS 39 (40)
T ss_dssp CSSCCTTCEEEECTTSCEEEECSSSCCEESSSCCC
T ss_pred CCCCCCCceEEECCCCCEEEEECCCCCEeCCCCCC
Confidence 35799999999999999999999999999999963
No 347
>2ho2_A Fe65 protein, amyloid beta A4 protein-binding family B member 1; WW domain, beta sheet, Fe65, protein binding; 1.33A {Homo sapiens} SCOP: b.72.1.1 PDB: 2idh_A* 2oei_A
Probab=98.99 E-value=2.8e-10 Score=84.55 Aligned_cols=33 Identities=24% Similarity=0.608 Sum_probs=30.8
Q ss_pred CCCCCCcEEEEccCCceEeeeCCCCceeccCCcc
Q psy6910 294 GPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRL 327 (1145)
Q Consensus 294 ~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~ 327 (1145)
.+||+|||++.+.+| +||+||+|++|+|++|+.
T Consensus 2 ~~LP~GWe~~~d~~g-~YY~n~~t~~tqWe~P~~ 34 (38)
T 2ho2_A 2 SDLPAGWMRVQDTSG-TYYWHIPTGTTQWEPPGR 34 (38)
T ss_dssp CCSCTTEEEEECSSC-EEEEETTTTEEESSCCCC
T ss_pred CcCCCCceEEEeCCC-CEEEecCCCCEeccCCCC
Confidence 369999999999999 999999999999999974
No 348
>2law_A Yorkie homolog; YAP, SMAD1, CDK, signal transduction, signaling protein-TRAN complex; NMR {Homo sapiens}
Probab=98.99 E-value=2.6e-10 Score=85.55 Aligned_cols=35 Identities=40% Similarity=0.726 Sum_probs=32.5
Q ss_pred CCCCCCCceeeeCCCCceEEEeCCCceeeCcCCcc
Q psy6910 339 DDELPYGWERIDDPAYGTYYIDHVNKQTQYENPVL 373 (1145)
Q Consensus 339 ~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~ 373 (1145)
..+||+|||++.+.+|++||+||.|++|+|+|||+
T Consensus 4 ~~~LP~gWe~~~~~~G~~Yy~nh~t~~ttW~~Prl 38 (38)
T 2law_A 4 EGPLPDGWEQAMTQDGEIYYINHKNKTTSWLDPRL 38 (38)
T ss_dssp -CCCSSSCCEEEETTTEEEEEETTTTEEESSCTTC
T ss_pred cCCCCCCcEEEECCCCCEEEEECCCCCEeCCCCCC
Confidence 35799999999999999999999999999999985
No 349
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.99 E-value=1.3e-09 Score=104.20 Aligned_cols=84 Identities=25% Similarity=0.338 Sum_probs=71.9
Q ss_pred cceEEEEEEe-cccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Q psy6910 434 GERIHSSLVK-SLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPG 512 (1145)
Q Consensus 434 g~~~~v~l~k-~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g 512 (1145)
+....+.+.+ +..||||+|.++.+. ..+++|..|.+++||+++| |++||+|++|||+.+.++++.+++.+++..
T Consensus 14 ~~~~~v~~~~~~~~~lG~~l~~~~~~-~~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~--- 88 (114)
T 1x5n_A 14 NKEKKVFISLVGSRGLGCSISSGPIQ-KPGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLKSS--- 88 (114)
T ss_dssp CSSEEEEECCCSSCCCCEEEEECCSS-SCSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHHHC---
T ss_pred CCcEEEEEEEcCCCceeEEEeecCCC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC---
Confidence 3345666644 567999999998665 5689999999999999999 999999999999999999999999999872
Q ss_pred CeEEEEEEeC
Q psy6910 513 ETVQLEVCRG 522 (1145)
Q Consensus 513 ~~v~l~v~R~ 522 (1145)
..+.|+|.|+
T Consensus 89 ~~v~l~v~r~ 98 (114)
T 1x5n_A 89 RSLTISIVAA 98 (114)
T ss_dssp SSEEEEECSS
T ss_pred CeEEEEEEcC
Confidence 4899999876
No 350
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.54 E-value=4.8e-11 Score=113.62 Aligned_cols=87 Identities=16% Similarity=0.236 Sum_probs=79.2
Q ss_pred cccceEeEEEeCCCCCCCceeeeccccCCCceEEEEecCCccccccCCCCCCcEEEeeCCEEecCCCHHHHHHHHHhhcC
Q psy6910 18 WQDKETPVTLTVPPDGSLNFSVGGGSDSGEFAYVTNINKEKVKGAEKYLEEKAIILEIQGQKVAGYTRRDTIAWLNHCCR 97 (1145)
Q Consensus 18 ~~~~v~~~~~~~~~~g~~~~~i~gg~e~g~~~~v~~i~~~~~~~~sg~l~~GD~i~evng~~v~g~~~~~~~~~l~~~~~ 97 (1145)
+...+++|.|.|..++.|||+|.||.+.+.-++|.+|..|+.|++++.|.+||+|++|||++|.+++..++..+|+..
T Consensus 24 ~~~~~~~v~l~k~~~~glG~~l~~g~~~~~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~~-- 101 (112)
T 2lob_A 24 YFQGIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQ-- 101 (112)
Confidence 445788999999999999999999988887789999999999999888999999999999999999999999999988
Q ss_pred CCCcEEEEEe
Q psy6910 98 SGKTLTLRTV 107 (1145)
Q Consensus 98 ~~~~v~~~~~ 107 (1145)
.+.|+|+|.
T Consensus 102 -~~~v~l~V~ 110 (112)
T 2lob_A 102 -RGEIEFEVV 110 (112)
Confidence 778888764
No 351
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.53 E-value=5e-11 Score=113.51 Aligned_cols=82 Identities=27% Similarity=0.442 Sum_probs=70.4
Q ss_pred eEEEEEEec-ccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCe
Q psy6910 436 RIHSSLVKS-LRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGET 514 (1145)
Q Consensus 436 ~~~v~l~k~-~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~ 514 (1145)
...|.|.|. ..||||++.+|.+. ..+++|.+|.++|||++++.|++||+|++|||.++.+.++.+++.+|+. .+..
T Consensus 28 ~~~v~l~k~~~~glG~~l~~g~~~-~~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~--~~~~ 104 (112)
T 2lob_A 28 IRKVLLLKEDHEGLGISITGGKEH-GVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQ--QRGE 104 (112)
Confidence 346777775 47999999998776 5679999999999999954499999999999999999999999999997 4566
Q ss_pred EEEEEE
Q psy6910 515 VQLEVC 520 (1145)
Q Consensus 515 v~l~v~ 520 (1145)
|+|+|.
T Consensus 105 v~l~V~ 110 (112)
T 2lob_A 105 IEFEVV 110 (112)
Confidence 888774
No 352
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.98 E-value=8.2e-10 Score=103.66 Aligned_cols=83 Identities=18% Similarity=0.390 Sum_probs=73.1
Q ss_pred ceEeEEEeCCCCCCCceeeec-------cccCCCceEEEEecCCccccccCCCCCCcEEEeeCCEEecCCCHHHHHHHHH
Q psy6910 21 KETPVTLTVPPDGSLNFSVGG-------GSDSGEFAYVTNINKEKVKGAEKYLEEKAIILEIQGQKVAGYTRRDTIAWLN 93 (1145)
Q Consensus 21 ~v~~~~~~~~~~g~~~~~i~g-------g~e~g~~~~v~~i~~~~~~~~sg~l~~GD~i~evng~~v~g~~~~~~~~~l~ 93 (1145)
..+++.+.|...+.|||+|.+ +.+....++|..|..|+.|++.| |.+||+|++|||++|.+++.+|+.++|+
T Consensus 15 ~~~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~ 93 (104)
T 2z17_A 15 QRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDLIR 93 (104)
T ss_dssp CCCEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHHHH
T ss_pred cceEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHH
Confidence 346677999988999999998 33445678999999999999999 9999999999999999999999999999
Q ss_pred hhcCCCCcEEEEEe
Q psy6910 94 HCCRSGKTLTLRTV 107 (1145)
Q Consensus 94 ~~~~~~~~v~~~~~ 107 (1145)
.. .+.|+|+|+
T Consensus 94 ~~---~~~v~l~v~ 104 (104)
T 2z17_A 94 SS---GNLLTIETL 104 (104)
T ss_dssp HT---TTEEEEECC
T ss_pred hC---CCcEEEEEC
Confidence 99 788888763
No 353
>2ysg_A Syntaxin-binding protein 4; synip, STXBP4, WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=98.98 E-value=4.3e-10 Score=85.36 Aligned_cols=36 Identities=36% Similarity=0.761 Sum_probs=33.5
Q ss_pred CCCCCCCceeeeCCCCceEEEeCCCceeeCcCCccc
Q psy6910 339 DDELPYGWERIDDPAYGTYYIDHVNKQTQYENPVLQ 374 (1145)
Q Consensus 339 ~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~ 374 (1145)
..+||+|||++.+++|++||+||.|++|+|+||+++
T Consensus 5 ~~~LP~gWe~~~~~~Gr~Yy~nh~t~~ttW~~P~~s 40 (40)
T 2ysg_A 5 SSGLPYGWEEAYTADGIKYFINHVTQTTSWIHPVMS 40 (40)
T ss_dssp SSCCCTTEEEEECSSSCEEEEESSSCCEECCCCCCC
T ss_pred cCCCCCCcEEEEcCCCCEEEEECCCCcCcCCCCCCC
Confidence 458999999999999999999999999999999873
No 354
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.97 E-value=1.3e-09 Score=114.55 Aligned_cols=73 Identities=32% Similarity=0.508 Sum_probs=66.2
Q ss_pred cceeEEEecCCCC-------CCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEEEE
Q psy6910 446 RGLGFTIVGGDDS-------KEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQLE 518 (1145)
Q Consensus 446 ~glG~~i~gg~~~-------~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~l~ 518 (1145)
.||||+|.||.+. ...+++|.+|.++|||++ | |++||+|++|||+++.+++|.+++.+++. .+..|.|+
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~ 77 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKT--FQNTVELI 77 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCCHHHHHHHHHH--CCSEEEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEE
Confidence 5899999998752 256899999999999999 7 99999999999999999999999999998 46799999
Q ss_pred EEeC
Q psy6910 519 VCRG 522 (1145)
Q Consensus 519 v~R~ 522 (1145)
|.|.
T Consensus 78 v~r~ 81 (195)
T 2qbw_A 78 IVRE 81 (195)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 9993
No 355
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.97 E-value=1e-09 Score=104.86 Aligned_cols=85 Identities=29% Similarity=0.519 Sum_probs=74.6
Q ss_pred ccEEEEeecC-CcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeE
Q psy6910 1032 QYHAIELSRG-TRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTV 1110 (1145)
Q Consensus 1032 ~~~~v~l~k~-~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v 1110 (1145)
..+++.+.+. ...|||++..... ..+++|..|.++|||+++| |++||+|++|||.++.++++.+++++|+..+..+
T Consensus 13 dp~~~~l~~~~~~~~G~~l~~~~~--~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v 89 (114)
T 2edz_A 13 NPRECKLSKQEGQNYGFFLRIEKD--TDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSV 89 (114)
T ss_dssp CCEEEEEECCTTCCCSCEEECCTT--CCSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHHHHHTCSEE
T ss_pred CCEEEEEeCCCCCcccEEEEEecC--CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEE
Confidence 5678888775 4579999887543 4689999999999999999 9999999999999999999999999999888899
Q ss_pred EEEEEeCCC
Q psy6910 1111 RLLIKRGGS 1119 (1145)
Q Consensus 1111 ~L~v~R~~~ 1119 (1145)
.|+|.|++.
T Consensus 90 ~l~v~R~~~ 98 (114)
T 2edz_A 90 TLLVLDGDS 98 (114)
T ss_dssp EEEEECHHH
T ss_pred EEEEEECCc
Confidence 999999764
No 356
>2djy_A SMAD ubiquitination regulatory factor 2; beta sheet, polyproline type II helix, PPII, ligase/signaling protein complex; NMR {Homo sapiens} PDB: 2lb1_A
Probab=98.97 E-value=5.1e-10 Score=85.62 Aligned_cols=37 Identities=38% Similarity=0.738 Sum_probs=34.1
Q ss_pred CCCCCCCceeeeCCCCceEEEeCCCceeeCcCCcccc
Q psy6910 339 DDELPYGWERIDDPAYGTYYIDHVNKQTQYENPVLQA 375 (1145)
Q Consensus 339 ~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~~ 375 (1145)
..+||+|||++.+.+|++|||||.|++|+|+||++.+
T Consensus 5 ~~~LP~GWe~~~~~~G~~Yy~nh~t~~ttW~~Pr~~~ 41 (42)
T 2djy_A 5 SGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSA 41 (42)
T ss_dssp CSCCCSSEEEEECSSSCEEEEETTTTEEESSCTTTSC
T ss_pred cCCCCcCcEEEECCCCCEEEEECCCCCEeCCCCCCCC
Confidence 3589999999999999999999999999999999853
No 357
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.96 E-value=6.6e-10 Score=108.34 Aligned_cols=85 Identities=27% Similarity=0.433 Sum_probs=75.8
Q ss_pred ceEEEEEEecc-cceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCC
Q psy6910 435 ERIHSSLVKSL-RGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGE 513 (1145)
Q Consensus 435 ~~~~v~l~k~~-~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~ 513 (1145)
+.+.|.|.++. .||||++.++.+ ..+++|.+|.++|||+++|.|++||+|++|||..+.++++.++.++|+.. .|.
T Consensus 8 ~~~~v~l~~~~~~glG~~~~~~~~--~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~g~ 84 (127)
T 1b8q_A 8 NVISVRLFKRKVGGLGFLVKERVS--KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI-ASE 84 (127)
T ss_dssp CSEEEEEECTTTSCCSCCEEECTT--SSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSC-CSS
T ss_pred ceEEEEEEeCCCCcEeEEEEecCC--CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCC
Confidence 45788999875 799999998754 35799999999999999995599999999999999999999999999984 588
Q ss_pred eEEEEEEeC
Q psy6910 514 TVQLEVCRG 522 (1145)
Q Consensus 514 ~v~l~v~R~ 522 (1145)
.|.|+|.|+
T Consensus 85 ~v~l~v~R~ 93 (127)
T 1b8q_A 85 THVVLILRG 93 (127)
T ss_dssp CEEEEEECC
T ss_pred eEEEEEEeC
Confidence 999999987
No 358
>2ysf_A E3 ubiquitin-protein ligase itchy homolog; AIP4, NAPP1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=98.96 E-value=5.1e-10 Score=84.89 Aligned_cols=35 Identities=31% Similarity=0.534 Sum_probs=33.1
Q ss_pred CCCCCCCceeeeCCCCceEEEeCCCceeeCcCCcc
Q psy6910 339 DDELPYGWERIDDPAYGTYYIDHVNKQTQYENPVL 373 (1145)
Q Consensus 339 ~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~ 373 (1145)
..+||+|||++.+++|++||+||.|++|+|+||++
T Consensus 5 ~~~LP~gWe~~~~~~G~~Yy~nh~t~~ttw~~Pr~ 39 (40)
T 2ysf_A 5 SSGLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRT 39 (40)
T ss_dssp CCCCCSSEEEEECTTCCEEEEETTTCCEESSCTTT
T ss_pred cCCCCcCcEEEEcCCCCEEEEECCCCcEecCCCCC
Confidence 45899999999999999999999999999999986
No 359
>1ymz_A CC45; artificial protein, computational design, unknown function; NMR {Synthetic} SCOP: k.22.1.1
Probab=98.96 E-value=3.9e-10 Score=87.25 Aligned_cols=36 Identities=33% Similarity=0.824 Sum_probs=32.3
Q ss_pred CCCCCCCCcEEEEccCCceEeeeCCCCceeccCCcc
Q psy6910 292 DLGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRL 327 (1145)
Q Consensus 292 ~~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~ 327 (1145)
...+||+||+++++.+|++||+||+|++|+|++|+.
T Consensus 5 ~~~~LP~gW~~~~~~~Gr~YY~n~~T~~t~We~P~~ 40 (43)
T 1ymz_A 5 RSMPLPPGWERRTDVEGKVYYFNVRTLTTTWERPTI 40 (43)
T ss_dssp --CCCCSSEEEEECTTSCEEEEETTTTEEESSCCCS
T ss_pred cCCCCCCCCEEEECCCCCEEEEECCCCCCcccCCcc
Confidence 356899999999999999999999999999999973
No 360
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.95 E-value=1.3e-09 Score=128.11 Aligned_cols=82 Identities=24% Similarity=0.390 Sum_probs=75.4
Q ss_pred eEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeE
Q psy6910 436 RIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETV 515 (1145)
Q Consensus 436 ~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v 515 (1145)
...|.+.|+ .||||++.||.+ .+++|.+|.+||||+++| |++||+|++|||+++.++++.+++.+|+..+.|..|
T Consensus 2 ~r~V~l~k~-~~lG~~i~gg~~---~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v 76 (468)
T 3shw_A 2 MKLVKFRKG-DSVGLRLAGGND---VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEV 76 (468)
T ss_dssp EEEEEEECC-SSCCEEEEEETT---TEEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEE
T ss_pred ceEEEEecC-CccceEEEccCc---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEE
Confidence 356788886 899999999865 479999999999999999 999999999999999999999999999998789999
Q ss_pred EEEEEeC
Q psy6910 516 QLEVCRG 522 (1145)
Q Consensus 516 ~l~v~R~ 522 (1145)
+|+|.|+
T Consensus 77 ~L~V~r~ 83 (468)
T 3shw_A 77 TILAQKK 83 (468)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9999986
No 361
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.95 E-value=2.9e-09 Score=103.93 Aligned_cols=86 Identities=30% Similarity=0.379 Sum_probs=74.1
Q ss_pred ccceEEEEEEecc-cceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy6910 433 IGERIHSSLVKSL-RGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISP 511 (1145)
Q Consensus 433 ~g~~~~v~l~k~~-~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~ 511 (1145)
.|+.+++.+.... .+|||++.++.+. ..+++|.+|.++|||+++| |++||+|++|||+.+.++++.+++++++.
T Consensus 18 ~g~~~~v~v~~~~~~~lG~~~~~~~~~-~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~~~--- 92 (128)
T 1uf1_A 18 GGDEKKVNLVLGDGRSLGLTIRGGAEY-GLGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKS--- 92 (128)
T ss_dssp CSSEEEEEEECCSSCCCCEEEECCTTT-TCCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTT---
T ss_pred CCcEEEEEEEECCCCccCEEEECcccC-CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHhc---
Confidence 4566677777653 6899999997654 4579999999999999999 99999999999999999999999999987
Q ss_pred CCeEEEEEEeCC
Q psy6910 512 GETVQLEVCRGY 523 (1145)
Q Consensus 512 g~~v~l~v~R~~ 523 (1145)
+..|.|+|.|+-
T Consensus 93 ~~~v~l~v~R~g 104 (128)
T 1uf1_A 93 SRHLILTVKDVG 104 (128)
T ss_dssp CSEEEEEEECCS
T ss_pred CCeEEEEEEECC
Confidence 469999999874
No 362
>2l4j_A YES-associated protein 2 (YAP2); WW domain, medaka, transcription; NMR {Oryzias latipes}
Probab=98.95 E-value=7.6e-10 Score=86.46 Aligned_cols=38 Identities=39% Similarity=0.744 Sum_probs=34.7
Q ss_pred CCCCCCCCceeeeCCCCceEEEeCCCceeeCcCCcccc
Q psy6910 338 SDDELPYGWERIDDPAYGTYYIDHVNKQTQYENPVLQA 375 (1145)
Q Consensus 338 ~~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~~ 375 (1145)
...+||+|||+..+.+|++|||||.|++|+|+||++..
T Consensus 8 ~~~~LP~gWe~~~~~~G~~Yyinh~t~~TtWe~Pr~~~ 45 (46)
T 2l4j_A 8 ASGPLPEGWEQAITPEGEIYYINHKNKTTSWLDPRLET 45 (46)
T ss_dssp TTSCCCTTCEEEECTTSCEEEEETTTTEEECSCCSSCC
T ss_pred cCCCCCcCceeEECCCCCEEEEECCCCCEeCCCCCcCC
Confidence 34589999999999999999999999999999999863
No 363
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.94 E-value=4.6e-09 Score=99.90 Aligned_cols=85 Identities=24% Similarity=0.394 Sum_probs=73.5
Q ss_pred cEEEEeecC-CcceeEEEEccCCcccccEEEEEEcCCChhcccCCC-CCCCEEEEECCEEcCCCCHHHHHHHHHcC-CCe
Q psy6910 1033 YHAIELSRG-TRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHL-KVGDEIVEINGINTKNMTHAEAIEIIRNG-DST 1109 (1145)
Q Consensus 1033 ~~~v~l~k~-~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L-~~GD~Il~ING~~v~~~s~~eav~~lk~~-~~~ 1109 (1145)
.++|.|.++ ..+|||.+....+ ..+++|..|.++|||+++| | ++||+|++|||.++.+++++++.++|+.. +..
T Consensus 2 ~~~v~l~~~~~~glG~~~~~~~~--~~~~~V~~v~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~ 78 (112)
T 1qau_A 2 VISVRLFKRKVGGLGFLVKERVS--KPPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEVLRGIASET 78 (112)
T ss_dssp EEEEEEECBTTTBTSEEEEECSS--SSCEEEEEECTTSHHHHHT-CCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSS
T ss_pred EEEEEEEcCCCCceeEEEEecCC--CCCEEEEEeCCCChHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCc
Confidence 467888776 4689999987643 4589999999999999999 6 99999999999999988899999999975 467
Q ss_pred EEEEEEeCCCc
Q psy6910 1110 VRLLIKRGGSV 1120 (1145)
Q Consensus 1110 v~L~v~R~~~~ 1120 (1145)
+.|++.|++..
T Consensus 79 v~l~v~R~g~~ 89 (112)
T 1qau_A 79 HVVLILRGPEG 89 (112)
T ss_dssp EEEEEEECCTT
T ss_pred EEEEEEeCCcc
Confidence 99999998864
No 364
>2ysc_A Amyloid beta A4 precursor protein-binding family B member 3; Fe65-like protein 2, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=98.94 E-value=4.9e-10 Score=83.87 Aligned_cols=34 Identities=32% Similarity=0.751 Sum_probs=31.0
Q ss_pred CCCCCCCCcEEEEccCCceEeeeCCCCceeccCCc
Q psy6910 292 DLGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPR 326 (1145)
Q Consensus 292 ~~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr 326 (1145)
...+||+|||++.+.+|+ ||+||+|++|+|++|+
T Consensus 5 ~~~~LP~GWe~~~~~~G~-YY~n~~t~~tqWe~P~ 38 (39)
T 2ysc_A 5 SSGGLPPGWRKIHDAAGT-YYWHVPSGSTQWQRPT 38 (39)
T ss_dssp CCCCCCTTEEEEEETTEE-EEEESSSCCEESSCCC
T ss_pred CCCCCCCCcEEEEcCCCC-EEEEcCCCCEeccCCC
Confidence 346899999999999995 9999999999999995
No 365
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.94 E-value=9.7e-10 Score=104.73 Aligned_cols=84 Identities=19% Similarity=0.232 Sum_probs=72.5
Q ss_pred cceEEEEEEeccc---ceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Q psy6910 434 GERIHSSLVKSLR---GLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSIS 510 (1145)
Q Consensus 434 g~~~~v~l~k~~~---glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~ 510 (1145)
-....+.|.|... +|||+|.+..+....+++|..|.+++||+++| |++||+|++|||+.+..+++.++.++|+.
T Consensus 14 ~~~~~v~l~k~~~~~~~~G~~v~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~-- 90 (114)
T 2d8i_A 14 KVTQSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ-- 90 (114)
T ss_dssp CEEEEEEEECSCTTTCCCCCEEEEEEETTEEEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHHHHHHTS--
T ss_pred CceEEEEEEeCCCCccccCEEEEecCcCCcCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhC--
Confidence 3567899999764 79999988543212579999999999999999 99999999999999999999999999986
Q ss_pred CCCeEEEEEEeC
Q psy6910 511 PGETVQLEVCRG 522 (1145)
Q Consensus 511 ~g~~v~l~v~R~ 522 (1145)
..+.|+|.|.
T Consensus 91 --~~v~l~v~R~ 100 (114)
T 2d8i_A 91 --PSLGLLVRTY 100 (114)
T ss_dssp --SEEEEEEEEC
T ss_pred --CcEEEEEEEC
Confidence 3899999886
No 366
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.93 E-value=2.6e-09 Score=104.26 Aligned_cols=88 Identities=25% Similarity=0.513 Sum_probs=76.3
Q ss_pred CcccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCC-
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDS- 1108 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~- 1108 (1145)
....+.+.+.++..+|||.+.++.+ ..+++|..|.++|+|+++| |++||+|++|||.++.++++.++..+|+...+
T Consensus 7 ~~~~r~v~l~~~~~g~G~~l~~~~~--~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 83 (128)
T 2kjd_A 7 MLRPRLCTMKKGPSGYGFNLHSDKS--KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDE 83 (128)
T ss_dssp TCCCEEEEEECCSSSCCEEEEECSS--SCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTCSE
T ss_pred CCCcEEEEEecCCCcccEEEEecCC--CCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 3456888999988899999987653 3489999999999999999 99999999999999999999999999998754
Q ss_pred eEEEEEEeCCCc
Q psy6910 1109 TVRLLIKRGGSV 1120 (1145)
Q Consensus 1109 ~v~L~v~R~~~~ 1120 (1145)
.+.|+|.|++..
T Consensus 84 ~~~l~v~R~g~~ 95 (128)
T 2kjd_A 84 TKLLVVDRETDE 95 (128)
T ss_dssp EEEEEECHHHHH
T ss_pred EEEEEEEeCCcc
Confidence 477999886643
No 367
>2ez5_W Dnedd4, E3 ubiquitin-protein ligase NEDD4; WW domain, PY motif, binding affinity, signalling protein,ligase; NMR {Drosophila melanogaster}
Probab=98.93 E-value=8.7e-10 Score=86.20 Aligned_cols=37 Identities=27% Similarity=0.566 Sum_probs=34.3
Q ss_pred CCCCCCCCceeeeCCCCceEEEeCCCceeeCcCCccc
Q psy6910 338 SDDELPYGWERIDDPAYGTYYIDHVNKQTQYENPVLQ 374 (1145)
Q Consensus 338 ~~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~ 374 (1145)
...+||+|||++.+.+|++||+||.|++|+|+||++.
T Consensus 7 ~~~~LP~gWe~~~~~~Gr~Yyinh~t~~TtW~~Pr~~ 43 (46)
T 2ez5_W 7 EEEPLPPRWSMQVAPNGRTFFIDHASRRTTWIDPRNG 43 (46)
T ss_dssp CSCCCCTTEEEEECTTSSEEEEETTTTEEESBCTTTC
T ss_pred CCCCCCcCcEEEEcCCCCEEEEECCCCCEeccCCCCC
Confidence 3458999999999999999999999999999999975
No 368
>2zaj_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; BAI1-associated protein 1 (BAP-1); NMR {Homo sapiens}
Probab=98.93 E-value=7.2e-10 Score=87.50 Aligned_cols=36 Identities=61% Similarity=1.245 Sum_probs=33.8
Q ss_pred CCCCCCCceeeeCCCCceEEEeCCCceeeCcCCccc
Q psy6910 339 DDELPYGWERIDDPAYGTYYIDHVNKQTQYENPVLQ 374 (1145)
Q Consensus 339 ~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~ 374 (1145)
..+||+|||++.+..|++|||||.|++|||++|++.
T Consensus 11 ~~~LP~GWe~~~d~~Gr~YYvnh~t~~T~We~P~~~ 46 (49)
T 2zaj_A 11 ELELPAGWEKIEDPVYGIYYVDHINRKTQYENPSGP 46 (49)
T ss_dssp SSCCCTTEEEEEETTTEEEEEETTTTEEESSCCCSS
T ss_pred CCCCCcCceEEEcCCCCEEEEeCCCCCEecCCCCCC
Confidence 458999999999999999999999999999999875
No 369
>2yse_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI-1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.93 E-value=3.4e-10 Score=92.94 Aligned_cols=42 Identities=64% Similarity=1.279 Sum_probs=37.6
Q ss_pred CCCCCCCceeeeCCCCceEEEeCCCceeeCcCCccccccCCC
Q psy6910 339 DDELPYGWERIDDPAYGTYYIDHVNKQTQYENPVLQAKHRDQ 380 (1145)
Q Consensus 339 ~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~~~~~~~ 380 (1145)
..+||+|||++.|+.|++|||||.|++|||++|++...+..+
T Consensus 11 ~~~LP~GWE~~~d~~Gr~YYvnh~tk~T~We~P~~~~~~~~~ 52 (60)
T 2yse_A 11 ELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQ 52 (60)
T ss_dssp CSSCCSSEEEEECSSSCEEEEETTTTEEESSCHHHHHHHHHS
T ss_pred CCCCCCCcEEEECCCCCEEEEeCCCCCeeccCCCchhhhccc
Confidence 458999999999999999999999999999999998766533
No 370
>1jmq_A YAP65, 65 kDa YES-associated protein; polyproline ligand, YAP65 mutant, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1k9q_A* 1k9r_A 1k5r_A* 2lax_A* 2lay_A*
Probab=98.93 E-value=3e-10 Score=89.31 Aligned_cols=36 Identities=44% Similarity=0.827 Sum_probs=33.4
Q ss_pred CCCCCCCcEEEEccCCceEeeeCCCCceeccCCcch
Q psy6910 293 LGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRLC 328 (1145)
Q Consensus 293 ~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~~ 328 (1145)
..+||+|||++.+.+||+||+||+|++|+|+|||..
T Consensus 6 ~~~LP~GWe~~~~~~gr~y~~n~~t~~t~W~dPr~~ 41 (46)
T 1jmq_A 6 DVPLPAGWEMAKTSSGQRYFKNHIDQTTTWQDPRKA 41 (46)
T ss_dssp SCCCCTTBCCBCCSSCCCBEEETTTTEEESSCTTTS
T ss_pred CCCCCcCcEEEEcCCCceEEEEecCCceeecCCCch
Confidence 357999999999999999999999999999999864
No 371
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.92 E-value=9.2e-10 Score=104.50 Aligned_cols=82 Identities=26% Similarity=0.387 Sum_probs=71.1
Q ss_pred cEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCC-eEE
Q psy6910 1033 YHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDS-TVR 1111 (1145)
Q Consensus 1033 ~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~-~v~ 1111 (1145)
.+.|.|.++..+|||.+.+ ..+++|..|.++++|+++| |++||+|++|||+++.+++|++++++|+..++ .+.
T Consensus 16 ~r~v~l~~~~~~~G~~l~~-----~~~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v~ 89 (111)
T 1vae_A 16 PRGIHFTVEEGDLGFTLRG-----NTPVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVE 89 (111)
T ss_dssp CCCCCEECCSSCCSCCEES-----SSSCEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEEC
T ss_pred CeEEEEEcCCCcccEEEeC-----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEE
Confidence 3567788888899999865 3468999999999999999 99999999999999999999999999998765 599
Q ss_pred EEEEeCCCc
Q psy6910 1112 LLIKRGGSV 1120 (1145)
Q Consensus 1112 L~v~R~~~~ 1120 (1145)
|+|.|....
T Consensus 90 l~V~~~~~~ 98 (111)
T 1vae_A 90 MKVVSLLDS 98 (111)
T ss_dssp EEEECEECC
T ss_pred EEEEecCCC
Confidence 999875543
No 372
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.92 E-value=2.6e-09 Score=100.21 Aligned_cols=82 Identities=27% Similarity=0.510 Sum_probs=69.3
Q ss_pred ccEEEEeecCC-cceeEEEEccCC------cccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHH
Q psy6910 1032 QYHAIELSRGT-RGFGFSIRGGRE------FQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIR 1104 (1145)
Q Consensus 1032 ~~~~v~l~k~~-~~lG~sl~gg~~------~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk 1104 (1145)
..+.+.+.+.. .+|||.+.+... ....+++|..|.++++|+++| |++||+|++|||+++.++++++++++|+
T Consensus 15 ~~~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~ 93 (104)
T 2z17_A 15 QRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDLIR 93 (104)
T ss_dssp CCCEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHHHH
T ss_pred cceEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHH
Confidence 44667788764 579999987321 114689999999999999999 9999999999999999999999999999
Q ss_pred cCCCeEEEEE
Q psy6910 1105 NGDSTVRLLI 1114 (1145)
Q Consensus 1105 ~~~~~v~L~v 1114 (1145)
..++.+.|+|
T Consensus 94 ~~~~~v~l~v 103 (104)
T 2z17_A 94 SSGNLLTIET 103 (104)
T ss_dssp HTTTEEEEEC
T ss_pred hCCCcEEEEE
Confidence 9877887765
No 373
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.92 E-value=4.6e-09 Score=96.06 Aligned_cols=79 Identities=22% Similarity=0.371 Sum_probs=68.0
Q ss_pred ceEEEEEEecc--cceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Q psy6910 435 ERIHSSLVKSL--RGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPG 512 (1145)
Q Consensus 435 ~~~~v~l~k~~--~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g 512 (1145)
+.+.+.+.+.. ..|||.+. .+++|.+|.++|||+++|+|++||+|++|||..+.++++.++.++|+. .+
T Consensus 2 ~~~~v~~~~~~~~~~~g~~~~-------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~--~~ 72 (92)
T 3cyy_A 2 KPTKVTLVKSAKNEEYGLRLA-------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIER--SK 72 (92)
T ss_dssp CCEEEEEECSSTTSCCCEEEE-------EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHT--TT
T ss_pred CcEEEEEEeCCCCCCCCEEEe-------CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CC
Confidence 45667776643 57999886 259999999999999999999999999999999999999999999998 35
Q ss_pred CeEEEEEEeC
Q psy6910 513 ETVQLEVCRG 522 (1145)
Q Consensus 513 ~~v~l~v~R~ 522 (1145)
..+.|+|.|+
T Consensus 73 ~~v~l~v~r~ 82 (92)
T 3cyy_A 73 GKLKMVVQRD 82 (92)
T ss_dssp TEEEEEEEC-
T ss_pred CcEEEEEEeC
Confidence 6999999886
No 374
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.92 E-value=5.1e-09 Score=99.93 Aligned_cols=87 Identities=29% Similarity=0.567 Sum_probs=73.7
Q ss_pred CcccEEEEeec-CCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCC
Q psy6910 1030 DEQYHAIELSR-GTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDS 1108 (1145)
Q Consensus 1030 ~~~~~~v~l~k-~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~ 1108 (1145)
....+++.+.+ +..+|||++.++.+. ..+++|..|.++++|+++| |++||+|++|||+++.++++.+++.+++.. .
T Consensus 13 ~~~~~~v~~~~~~~~~lG~~l~~~~~~-~~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~-~ 89 (114)
T 1x5n_A 13 ENKEKKVFISLVGSRGLGCSISSGPIQ-KPGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLKSS-R 89 (114)
T ss_dssp CCSSEEEEECCCSSCCCCEEEEECCSS-SCSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHHHC-S
T ss_pred CCCcEEEEEEEcCCCceeEEEeecCCC-CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC-C
Confidence 34456676644 556899999987654 5689999999999999999 999999999999999999988999999876 6
Q ss_pred eEEEEEEeC-CC
Q psy6910 1109 TVRLLIKRG-GS 1119 (1145)
Q Consensus 1109 ~v~L~v~R~-~~ 1119 (1145)
.+.|+|.|+ +.
T Consensus 90 ~v~l~v~r~~g~ 101 (114)
T 1x5n_A 90 SLTISIVAAAGR 101 (114)
T ss_dssp SEEEEECSSTTT
T ss_pred eEEEEEEcCCCC
Confidence 799999988 54
No 375
>2ysb_A Salvador homolog 1 protein; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: k.22.1.1
Probab=98.92 E-value=1.1e-09 Score=86.70 Aligned_cols=39 Identities=31% Similarity=0.470 Sum_probs=35.6
Q ss_pred cCCCCCCCCCceeeeCCCCceEEEeCCCceeeCcCCccc
Q psy6910 336 DCSDDELPYGWERIDDPAYGTYYIDHVNKQTQYENPVLQ 374 (1145)
Q Consensus 336 ~~~~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~ 374 (1145)
.|...+||+|||++.+++|++|||||+|++|+|+||+..
T Consensus 6 ~~~~~~LP~gWe~~~~~~Gr~Yy~nh~t~~T~W~~P~~~ 44 (49)
T 2ysb_A 6 SGEDLPLPPGWSVDWTMRGRKYYIDHNTNTTHWSHPLES 44 (49)
T ss_dssp CCCCCCCCTTEEEEECSSSCEEEEETTTTEEESSCTTTS
T ss_pred CCCCCCCCCCceEEECCCCCEEEEEcCCCCEEecCCCCC
Confidence 355668999999999999999999999999999999875
No 376
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.91 E-value=1.8e-09 Score=98.36 Aligned_cols=81 Identities=19% Similarity=0.206 Sum_probs=68.9
Q ss_pred EEEEEEeccc---ceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCC
Q psy6910 437 IHSSLVKSLR---GLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGE 513 (1145)
Q Consensus 437 ~~v~l~k~~~---glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~ 513 (1145)
+.+.+.+.+. +|||++... ..+++|.+|.+++||+++| |++||+|++|||..+.+.++.++..+|+....|.
T Consensus 5 ~~~~~~~~~~~~~~lG~~~~~~----~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~ 79 (90)
T 2eaq_A 5 MRISINQTPGKSLDFGFTIKWD----IPGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETG 79 (90)
T ss_dssp EEEEEECCTTCSSCCSEEEEEE----TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHT
T ss_pred eEEEEEecCCCCCcccEEEEec----CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCC
Confidence 5566666542 799999754 2369999999999999999 9999999999999998889999999998654588
Q ss_pred eEEEEEEeC
Q psy6910 514 TVQLEVCRG 522 (1145)
Q Consensus 514 ~v~l~v~R~ 522 (1145)
.|.|+|.|+
T Consensus 80 ~v~l~v~R~ 88 (90)
T 2eaq_A 80 HLVMDVRRY 88 (90)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEeC
Confidence 999999885
No 377
>1wr7_A NEDD4-2; all-beta, ligase; NMR {Mus musculus}
Probab=98.91 E-value=1.1e-09 Score=83.65 Aligned_cols=35 Identities=40% Similarity=0.695 Sum_probs=33.1
Q ss_pred CCCCCCCceeeeCCCCceEEEeCCCceeeCcCCcc
Q psy6910 339 DDELPYGWERIDDPAYGTYYIDHVNKQTQYENPVL 373 (1145)
Q Consensus 339 ~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~ 373 (1145)
..+||.|||+..+++|++||+||.|++|||++|++
T Consensus 6 ~~~LP~gWe~~~~~~G~~Yy~n~~t~~t~We~Pr~ 40 (41)
T 1wr7_A 6 QSFLPPGWEMRIAPNGRPFFIDHNTKTTTWEDPRL 40 (41)
T ss_dssp CCSSCTTEEEEECTTSCEEEEETTTTEEESSCGGG
T ss_pred cCCCCCCcEEEEcCCCCEEEEECCCCCeecCCCCC
Confidence 45899999999999999999999999999999986
No 378
>1wr3_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus}
Probab=98.90 E-value=1e-09 Score=81.46 Aligned_cols=34 Identities=44% Similarity=0.776 Sum_probs=32.2
Q ss_pred CCCCCCceeeeCCCCceEEEeCCCceeeCcCCcc
Q psy6910 340 DELPYGWERIDDPAYGTYYIDHVNKQTQYENPVL 373 (1145)
Q Consensus 340 ~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~ 373 (1145)
.+||+||++..|.+|++||+||.|++|||++|++
T Consensus 3 ~~LP~GWe~~~d~~G~~Yy~n~~t~~t~We~P~l 36 (36)
T 1wr3_A 3 PPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSL 36 (36)
T ss_dssp SCSCTTEEEEECSSSCEEEEETTTCCEESSCSCC
T ss_pred CCCCCCCEEEECCCCCEEEEECCCCCEeeeCcCC
Confidence 4799999999999999999999999999999975
No 379
>1wmv_A WWOX, WW domain containing oxidoreductase; all-beta, apoptosis; NMR {Homo sapiens}
Probab=98.89 E-value=1.5e-09 Score=87.71 Aligned_cols=40 Identities=38% Similarity=0.777 Sum_probs=36.3
Q ss_pred CCCCCCCCCceeeeCCCCceEEEeCCCceeeCcCCccccc
Q psy6910 337 CSDDELPYGWERIDDPAYGTYYIDHVNKQTQYENPVLQAK 376 (1145)
Q Consensus 337 ~~~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~~~ 376 (1145)
+...+||+|||...+.+|++|||||.|++|+|+||++...
T Consensus 7 ~~~~~LP~GWe~~~~~~G~~Yyinh~tk~TtwedPr~~~~ 46 (54)
T 1wmv_A 7 RVAGDLPYGWEQETDENGQVFFVDHINKRTTYLDPRLAFT 46 (54)
T ss_dssp CCSSCSCTTEEEEECTTSCEEEEESSSCCEESSCTTSSCC
T ss_pred CcCCCCCcCcEEEECCCCCEEEEeCCCCCEeecCCCCccc
Confidence 4566899999999999999999999999999999998644
No 380
>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC, cell junction, cell membrane, membrane, SH3 domain; 2.80A {Homo sapiens}
Probab=98.89 E-value=3.4e-10 Score=125.59 Aligned_cols=101 Identities=9% Similarity=-0.022 Sum_probs=77.2
Q ss_pred ccccCCCCchHHHHhhhhccCcceeecccccCCCCCCCcCCccEEEeCHHHHHHHHHcCCEEEEEEeCCcccCCCccchh
Q psy6910 120 LNTRFPKGSVDHDLQNIIRDNLYLRTVPVTTRTPRDGELNGVDYTFLSIEEFKQLEKSGCLLESGLYEGNHYGTPKPVKE 199 (1145)
Q Consensus 120 ~~l~f~k~~i~~~l~~~~~~~~~~~~v~~TTR~~r~~E~~g~~Y~fvs~~~f~~~~~~~~flE~~~~~g~~YGt~~~~i~ 199 (1145)
+|= .|++|.+.|++.+ |+.|.++||+ ++ .|++|+|| ++++|+
T Consensus 151 ~GP--~k~~l~~~L~~~~-P~~F~~~v~~------------------~r-----~i~~~~fi------------s~~~V~ 192 (308)
T 3kfv_A 151 LGP--VADIAMQKLTAEM-PDQFEIAETV------------------SR-----TDSPSKII------------KLDTVR 192 (308)
T ss_dssp EST--THHHHHHHHHHHC-TTTEEECCCC-------------------------------CC------------CHHHHH
T ss_pred eCc--cHHHHHHHHHHhC-cccccccccc------------------cc-----cccCCCee------------cHHHHH
Confidence 554 4788899999995 8999999882 11 26788887 999999
Q ss_pred hhhcCCCCceeeecCCCChhhhhhhhcccccccceeEecCCChhhhhhhhhccCCCCccccccc
Q psy6910 200 PYVSLPQNVNLLPGAHPSSEGKRKRNRSNVEAMASKSIEPDMKTNGFDNKTVNMGNSSDYELND 263 (1145)
Q Consensus 200 ~~~~~g~~~~~il~~~~~~~~~~~~~~~~~~~~~~ifi~pps~~~l~~rl~~rg~~s~~~i~~~ 263 (1145)
+++++|+ +||||||+ +|+++++...++++ +|||.|||+++|++|+..+++++++.++++
T Consensus 193 ~vl~~Gk--~~ILDId~--QGa~~lk~~~~~pi-~IFI~PPS~eeL~~rr~R~~~esee~~~r~ 251 (308)
T 3kfv_A 193 VIAEKDK--HALLDVTP--SAIERLNYVQYYPI-VVFFIPESRPALKALRQWLAPASRRSTRRL 251 (308)
T ss_dssp HHHHTTC--EEEECCCH--HHHHHHHHTTCCCE-EEEEEESCHHHHHHHHHHHSTTCCCCHHHH
T ss_pred HHHHCCC--cEEEEECH--HHHHHHHhcCCCCE-EEEEeCCCHHHHHHHHhcCCCCCHHHHHHH
Confidence 9999988 99999988 67788888888888 999999999999997444455777766533
No 381
>2jmf_A E3 ubiquitin-protein ligase suppressor of deltex; WW domain, solution, complex, ligase/signaling protein complex; NMR {Drosophila melanogaster} SCOP: b.72.1.1 PDB: 2op7_A
Probab=98.89 E-value=1.3e-09 Score=87.63 Aligned_cols=38 Identities=29% Similarity=0.591 Sum_probs=35.0
Q ss_pred CCCCCCCCCceeeeCCCCceEEEeCCCceeeCcCCccc
Q psy6910 337 CSDDELPYGWERIDDPAYGTYYIDHVNKQTQYENPVLQ 374 (1145)
Q Consensus 337 ~~~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~ 374 (1145)
+...+||+|||++.+.+|++|||||.|++|+|+||++.
T Consensus 14 ~~~~~LP~GWe~~~~~~Gr~Yyinh~tk~TtW~dPr~~ 51 (53)
T 2jmf_A 14 INEGPLPPGWEIRYTAAGERFFVDHNTRRTTFEDPRPG 51 (53)
T ss_dssp TSCSCCCTTEEEEECTTSCEEEEETTTCCEESSCCCSS
T ss_pred CcCCCCCcCcEEEEcCCCCEEEEeCCCCcEecCCCCCC
Confidence 44568999999999999999999999999999999875
No 382
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.89 E-value=7.4e-09 Score=100.34 Aligned_cols=84 Identities=25% Similarity=0.543 Sum_probs=70.6
Q ss_pred cEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHc--CCCeE
Q psy6910 1033 YHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRN--GDSTV 1110 (1145)
Q Consensus 1033 ~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~--~~~~v 1110 (1145)
.+.+.+.+ ..+|||.+.++. ..+++|..|.++|||+++| |++||+|++|||.++.++++++++.+|+. .+..+
T Consensus 30 ~~~~~~~~-~~~lG~~l~~~~---~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v 104 (124)
T 3tsv_A 30 MKLVKFRK-GDSVGLRLAGGN---DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEV 104 (124)
T ss_dssp CEEEEEEC-SSCCCEEEEECT---TSCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEE
T ss_pred eEEEEcCC-CCceeEEEecCC---CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEE
Confidence 34444444 468999998754 3589999999999999999 99999999999999999999999998884 56789
Q ss_pred EEEEEeCCCcC
Q psy6910 1111 RLLIKRGGSVV 1121 (1145)
Q Consensus 1111 ~L~v~R~~~~~ 1121 (1145)
.|+|.|++..+
T Consensus 105 ~l~v~R~~~~~ 115 (124)
T 3tsv_A 105 TILAQKKKDVY 115 (124)
T ss_dssp EEEEEECHHHH
T ss_pred EEEEEECCchh
Confidence 99999987643
No 383
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.89 E-value=5.2e-09 Score=93.07 Aligned_cols=69 Identities=19% Similarity=0.340 Sum_probs=61.4
Q ss_pred ccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEEEEEEeC
Q psy6910 445 LRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQLEVCRG 522 (1145)
Q Consensus 445 ~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 522 (1145)
...|||.+.+ +++|.+|.++|||+++|+|++||+|++|||.++.++++.++.++|+.. +..+.|+|.|+
T Consensus 12 ~~~~g~~~~~-------gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~v~R~ 80 (81)
T 2rcz_A 12 NEEYGLRLAS-------HIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERS--KGKLKMVVQRD 80 (81)
T ss_dssp TCCCCEEEEE-------EEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTS--TTEEEEEEEC-
T ss_pred CCCCCEEEeC-------CEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCC--CCeEEEEEEeC
Confidence 4578998873 499999999999999999999999999999999999999999999983 45899999875
No 384
>2kyk_A E3 ubiquitin-protein ligase itchy homolog; LMP2A, PY motif, WW domain; NMR {Homo sapiens}
Probab=98.88 E-value=1.3e-09 Score=82.42 Aligned_cols=35 Identities=40% Similarity=0.800 Sum_probs=32.9
Q ss_pred CCCCCCceeeeCCCCceEEEeCCCceeeCcCCccc
Q psy6910 340 DELPYGWERIDDPAYGTYYIDHVNKQTQYENPVLQ 374 (1145)
Q Consensus 340 ~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~ 374 (1145)
.+||+||++..|++|++||+||.|++|||++|+++
T Consensus 5 ~~LP~gWe~~~d~~G~~YY~n~~t~~t~We~P~~e 39 (39)
T 2kyk_A 5 GPLPPGWERRVDNMGRIYYVDHFTRTTTWQRPTLE 39 (39)
T ss_dssp CCCCSSCEEEECTTSCEEEECSSSCCEECCCCCCC
T ss_pred CCCCCCcEEEEcCCCCEEEEECCCCCEeccCCCCC
Confidence 47999999999999999999999999999999863
No 385
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.88 E-value=1.5e-09 Score=103.12 Aligned_cols=82 Identities=23% Similarity=0.321 Sum_probs=71.1
Q ss_pred EEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEE
Q psy6910 437 IHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQ 516 (1145)
Q Consensus 437 ~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~ 516 (1145)
..|.|.|+..+|||++.++ .+++|..|.+++||+++| |++||+|++|||+.+.++++.+++++|+... +..|.
T Consensus 17 r~v~l~~~~~~~G~~l~~~-----~~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~~-~~~v~ 89 (111)
T 1vae_A 17 RGIHFTVEEGDLGFTLRGN-----TPVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSFG-GEEVE 89 (111)
T ss_dssp CCCCEECCSSCCSCCEESS-----SSCEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHTT-TSEEC
T ss_pred eEEEEEcCCCcccEEEeCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CceEE
Confidence 3467888889999999764 358999999999999999 9999999999999999999999999999853 55799
Q ss_pred EEEEeCCCC
Q psy6910 517 LEVCRGYPL 525 (1145)
Q Consensus 517 l~v~R~~~~ 525 (1145)
|+|.|..+.
T Consensus 90 l~V~~~~~~ 98 (111)
T 1vae_A 90 MKVVSLLDS 98 (111)
T ss_dssp EEEECEECC
T ss_pred EEEEecCCC
Confidence 999887543
No 386
>1i5h_W Rnedd4, ubiquitin ligase NEDD4; NEDD4, WW domains, ENAC, PY motif, liddle syndrome, proline-rich, ligase; NMR {Rattus norvegicus} SCOP: b.72.1.1 PDB: 1yiu_A 2jo9_A 2joc_A*
Probab=98.88 E-value=1.7e-09 Score=86.08 Aligned_cols=38 Identities=34% Similarity=0.597 Sum_probs=34.7
Q ss_pred CCCCCCCceeeeCCCCceEEEeCCCceeeCcCCccccc
Q psy6910 339 DDELPYGWERIDDPAYGTYYIDHVNKQTQYENPVLQAK 376 (1145)
Q Consensus 339 ~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~~~ 376 (1145)
..+||+|||++.+.+|++||+||.|++|+|+||++...
T Consensus 9 ~~~LP~gWe~~~~~~Gr~Yy~nh~t~~T~We~Pr~~~~ 46 (50)
T 1i5h_W 9 LGPLPPGWEERTHTDGRVFFINHNIKKTQWEDPRMQNV 46 (50)
T ss_dssp CSSCSTTEEEEECTTSCEEEEETTTTEEESSCTTTSCC
T ss_pred CCCCCcCcEEEEcCCCCEEEEECCCCCEEeeCCCCCcc
Confidence 45899999999999999999999999999999998643
No 387
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.88 E-value=9.7e-09 Score=100.18 Aligned_cols=88 Identities=31% Similarity=0.597 Sum_probs=73.4
Q ss_pred cccEEEEeecCC-cceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCe
Q psy6910 1031 EQYHAIELSRGT-RGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDST 1109 (1145)
Q Consensus 1031 ~~~~~v~l~k~~-~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~ 1109 (1145)
.+.+++.+.... ..|||.+.++.+. ..+++|..|.++|+|+++| |++||+|++|||.++.++++.++++.++.. ..
T Consensus 19 g~~~~v~v~~~~~~~lG~~~~~~~~~-~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~ 95 (128)
T 1uf1_A 19 GDEKKVNLVLGDGRSLGLTIRGGAEY-GLGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKSS-RH 95 (128)
T ss_dssp SSEEEEEEECCSSCCCCEEEECCTTT-TCCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTTC-SE
T ss_pred CcEEEEEEEECCCCccCEEEECcccC-CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC-Ce
Confidence 344566665432 5799999886554 4589999999999999999 999999999999999999999999999874 68
Q ss_pred EEEEEEeCCCcC
Q psy6910 1110 VRLLIKRGGSVV 1121 (1145)
Q Consensus 1110 v~L~v~R~~~~~ 1121 (1145)
+.|+|.|++...
T Consensus 96 v~l~v~R~g~~~ 107 (128)
T 1uf1_A 96 LILTVKDVGRLP 107 (128)
T ss_dssp EEEEEECCSCCS
T ss_pred EEEEEEECCccc
Confidence 999999987653
No 388
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.88 E-value=3.8e-09 Score=122.57 Aligned_cols=82 Identities=24% Similarity=0.375 Sum_probs=73.9
Q ss_pred eEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeE
Q psy6910 436 RIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETV 515 (1145)
Q Consensus 436 ~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v 515 (1145)
...|.+.++. ||||+|.||.+ .+++|.+|.+||||+++| |++||+|++|||.++.++++.+++.+|+....|+.|
T Consensus 10 ~~~v~~~k~~-~lG~~i~gg~~---~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v 84 (391)
T 3tsz_A 10 MKLVKFRKGD-SVGLRLAGGND---VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEV 84 (391)
T ss_dssp EEEEEEECCS-SCCEEEEEETT---TEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEE
T ss_pred cEEEEeecCC-ceeEEEEecCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeE
Confidence 4567777765 79999999865 489999999999999999 999999999999999999999999999976579999
Q ss_pred EEEEEeC
Q psy6910 516 QLEVCRG 522 (1145)
Q Consensus 516 ~l~v~R~ 522 (1145)
+|+|.|+
T Consensus 85 ~l~v~r~ 91 (391)
T 3tsz_A 85 TILAQKK 91 (391)
T ss_dssp EEEEEEC
T ss_pred EEEEeeC
Confidence 9999987
No 389
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.87 E-value=1.1e-08 Score=93.40 Aligned_cols=80 Identities=25% Similarity=0.534 Sum_probs=65.4
Q ss_pred EEEEeecC--CcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEE
Q psy6910 1034 HAIELSRG--TRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVR 1111 (1145)
Q Consensus 1034 ~~v~l~k~--~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~ 1111 (1145)
..+.+.+. ...|||.+. .+++|..|.++|+|+++|+|++||+|++|||.++.++++.++.++|+..++.+.
T Consensus 4 ~~v~~~~~~~~~~~g~~~~-------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~ 76 (92)
T 3cyy_A 4 TKVTLVKSAKNEEYGLRLA-------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLK 76 (92)
T ss_dssp EEEEEECSSTTSCCCEEEE-------EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEE
T ss_pred EEEEEEeCCCCCCCCEEEe-------CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEE
Confidence 34444432 247888775 368999999999999999999999999999999999999999999998778899
Q ss_pred EEEEeCCCc
Q psy6910 1112 LLIKRGGSV 1120 (1145)
Q Consensus 1112 L~v~R~~~~ 1120 (1145)
|+|.|++..
T Consensus 77 l~v~r~g~~ 85 (92)
T 3cyy_A 77 MVVQRDERA 85 (92)
T ss_dssp EEEEC----
T ss_pred EEEEeCCce
Confidence 999998764
No 390
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.87 E-value=8.3e-09 Score=94.55 Aligned_cols=78 Identities=24% Similarity=0.344 Sum_probs=67.3
Q ss_pred EEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHc---CCCeE
Q psy6910 1034 HAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRN---GDSTV 1110 (1145)
Q Consensus 1034 ~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~---~~~~v 1110 (1145)
..+.+.+...++||.+... ..+++|..|.++|||+++| |++||+|++|||..+...+|++++.+|+. +++.+
T Consensus 19 ~~l~l~~~~~g~G~~l~~~----~~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v 93 (101)
T 3qik_A 19 KRLLILPQEEDYGFDIEEK----NKAVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPL 93 (101)
T ss_dssp EEEEECCCSSSSSEEEEEE----TTEEEEEEECTTSHHHHHT-CCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCE
T ss_pred CeEEEEeCCCcccEEEEcc----CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeE
Confidence 4556666677899998763 4568999999999999999 99999999999999987899999999997 57889
Q ss_pred EEEEEe
Q psy6910 1111 RLLIKR 1116 (1145)
Q Consensus 1111 ~L~v~R 1116 (1145)
.|.|+.
T Consensus 94 ~LLV~~ 99 (101)
T 3qik_A 94 RLLVAT 99 (101)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 999874
No 391
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.87 E-value=3e-09 Score=97.47 Aligned_cols=80 Identities=20% Similarity=0.271 Sum_probs=70.0
Q ss_pred EEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC-CCCCeE
Q psy6910 437 IHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSI-SPGETV 515 (1145)
Q Consensus 437 ~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~-~~g~~v 515 (1145)
-.+.|.+...|+||.+... ....+|.+|.+++||+++| |++||+|++|||..+...+++|++.+++.+ +.|..|
T Consensus 19 ~~l~l~~~~~g~G~~l~~~----~~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v 93 (101)
T 3qik_A 19 KRLLILPQEEDYGFDIEEK----NKAVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPL 93 (101)
T ss_dssp EEEEECCCSSSSSEEEEEE----TTEEEEEEECTTSHHHHHT-CCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCE
T ss_pred CeEEEEeCCCcccEEEEcc----CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeE
Confidence 3566777788999999874 2358999999999999999 999999999999999999999999999975 468899
Q ss_pred EEEEEe
Q psy6910 516 QLEVCR 521 (1145)
Q Consensus 516 ~l~v~R 521 (1145)
.|.|+.
T Consensus 94 ~LLV~~ 99 (101)
T 3qik_A 94 RLLVAT 99 (101)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 999974
No 392
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.86 E-value=7.2e-09 Score=108.80 Aligned_cols=72 Identities=35% Similarity=0.601 Sum_probs=66.2
Q ss_pred cceeEEEEccCCc-------ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEEEEEE
Q psy6910 1043 RGFGFSIRGGREF-------QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVRLLIK 1115 (1145)
Q Consensus 1043 ~~lG~sl~gg~~~-------~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~L~v~ 1115 (1145)
.+|||+|.|+.+. ...+++|..|.++|+|++ | |++||+|++|||+++.+++|.+++.+++..++.|.|+|.
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~ 79 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIV 79 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 4799999998641 257999999999999999 8 999999999999999999999999999998889999999
Q ss_pred e
Q psy6910 1116 R 1116 (1145)
Q Consensus 1116 R 1116 (1145)
|
T Consensus 80 r 80 (195)
T 2qbw_A 80 R 80 (195)
T ss_dssp E
T ss_pred E
Confidence 9
No 393
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.85 E-value=1.1e-08 Score=97.51 Aligned_cols=85 Identities=31% Similarity=0.503 Sum_probs=76.5
Q ss_pred CCCeEEEEeccCCCcccEEEeecCCCCCceEEEeCCCCcccccCCCCCCCEEEEECCeeecccCHHHHHHHHHcCCCEEE
Q psy6910 918 GYPYDVTITRRENEGFGFVIISSLNKAGSTIGRIIEDSPADRSGELHLGDHILAVNHVDIMSLHHGEIVNLIKDSGYCVT 997 (1145)
Q Consensus 918 ~~~~~V~l~r~~~~~lG~~l~~~~~~~g~~I~~v~~gs~A~~~G~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~~~~v~ 997 (1145)
..++.+.+.+.....|||.+.......+++|..|.++|||+++| |++||+|++|||+++.++++.++..+++..+..+.
T Consensus 12 ldp~~~~l~~~~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 90 (114)
T 2edz_A 12 FNPRECKLSKQEGQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVT 90 (114)
T ss_dssp CCCEEEEEECCTTCCCSCEEECCTTCCSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHHHHHTCSEEE
T ss_pred CCCEEEEEeCCCCCcccEEEEEecCCCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEE
Confidence 46788889888888999998765555789999999999999999 99999999999999999989999999998899999
Q ss_pred EEEeCC
Q psy6910 998 LTIGAP 1003 (1145)
Q Consensus 998 L~v~r~ 1003 (1145)
|+|.|.
T Consensus 91 l~v~R~ 96 (114)
T 2edz_A 91 LLVLDG 96 (114)
T ss_dssp EEEECH
T ss_pred EEEEEC
Confidence 999773
No 394
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.85 E-value=7.7e-09 Score=94.18 Aligned_cols=70 Identities=27% Similarity=0.421 Sum_probs=62.0
Q ss_pred ceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHc--CCCeEEEEEEeCC
Q psy6910 1044 GFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRN--GDSTVRLLIKRGG 1118 (1145)
Q Consensus 1044 ~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~--~~~~v~L~v~R~~ 1118 (1145)
.|||.+... ..+++|..|.++|||+++| |++||+|++|||.++.+.++.++.++|+. .+..+.|+|.|++
T Consensus 18 ~lG~~~~~~----~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 89 (90)
T 2eaq_A 18 DFGFTIKWD----IPGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVRRYG 89 (90)
T ss_dssp CCSEEEEEE----TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred cccEEEEec----CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEEEEEEEeCC
Confidence 689988643 3579999999999999999 99999999999999977799999999985 4678999999875
No 395
>1wr4_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus} PDB: 2lb2_A*
Probab=98.84 E-value=2.3e-09 Score=79.71 Aligned_cols=34 Identities=38% Similarity=0.830 Sum_probs=32.1
Q ss_pred CCCCCCceeeeCCCCceEEEeCCCceeeCcCCcc
Q psy6910 340 DELPYGWERIDDPAYGTYYIDHVNKQTQYENPVL 373 (1145)
Q Consensus 340 ~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~ 373 (1145)
.+||+||++..+++|++||+||.|++|+|++|++
T Consensus 3 ~~LP~gWe~~~d~~g~~Yy~n~~t~~t~W~~P~~ 36 (36)
T 1wr4_A 3 PGLPSGWEERKDAKGRTYYVNHNNRTTTWTRPIM 36 (36)
T ss_dssp TTCCTTEEEEECSSSCEEEEETTTTEEESSCCCC
T ss_pred CCCCCCCEEEECCCCCEEEEECCCCCEeCcCCCC
Confidence 4799999999999999999999999999999974
No 396
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.84 E-value=4.9e-09 Score=102.13 Aligned_cols=89 Identities=21% Similarity=0.376 Sum_probs=76.4
Q ss_pred CcccEEEEeecCC-cceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcC-C
Q psy6910 1030 DEQYHAIELSRGT-RGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNG-D 1107 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~-~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~-~ 1107 (1145)
..+.+.+.+.++. .+|||.+....+ ..+++|..|.++|+|+++|.|++||+|++|||..+.+++++++.++|+.. +
T Consensus 6 ~~~~~~v~l~~~~~~glG~~~~~~~~--~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g 83 (127)
T 1b8q_A 6 EPNVISVRLFKRKVGGLGFLVKERVS--KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIAS 83 (127)
T ss_dssp CCCSEEEEEECTTTSCCSCCEEECTT--SSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSCCS
T ss_pred CCceEEEEEEeCCCCcEeEEEEecCC--CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 4467889998876 699999987543 35899999999999999993399999999999999998999999999975 4
Q ss_pred CeEEEEEEeCCCc
Q psy6910 1108 STVRLLIKRGGSV 1120 (1145)
Q Consensus 1108 ~~v~L~v~R~~~~ 1120 (1145)
..+.|++.|++..
T Consensus 84 ~~v~l~v~R~g~~ 96 (127)
T 1b8q_A 84 ETHVVLILRGPEG 96 (127)
T ss_dssp SCEEEEEECCCCS
T ss_pred CeEEEEEEeCCce
Confidence 6799999998864
No 397
>2dmv_A Itchy homolog E3 ubiquitin protein ligase; WW domain, three stranded antiparallel beta sheet, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.82 E-value=3.2e-09 Score=81.99 Aligned_cols=36 Identities=39% Similarity=0.722 Sum_probs=33.6
Q ss_pred CCCCCCCceeeeCCCCceEEEeCCCceeeCcCCccc
Q psy6910 339 DDELPYGWERIDDPAYGTYYIDHVNKQTQYENPVLQ 374 (1145)
Q Consensus 339 ~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~ 374 (1145)
..+||+|||++.|+.|++||+||.|++|||++|+..
T Consensus 5 ~~~LP~GWe~~~d~~Gr~YY~n~~t~~T~We~P~~~ 40 (43)
T 2dmv_A 5 SSGLPPGWEQRVDQHGRVYYVDHVEKRTTWDRPSGP 40 (43)
T ss_dssp CCSCCTTEEEEECTTSCEEEEETTTCCEESSCSSSC
T ss_pred CCCCCCCceEEECCCCCEEEEECCCCCEecCCcCCC
Confidence 458999999999999999999999999999999864
No 398
>2kpz_A E3 ubiquitin-protein ligase NEDD4; WW domain, HTLV1, NEDD4, human modular domain, complex, HOST interaction, ligase; NMR {Homo sapiens} PDB: 2kq0_A 2laj_A*
Probab=98.82 E-value=2.5e-09 Score=84.99 Aligned_cols=36 Identities=39% Similarity=0.732 Sum_probs=32.9
Q ss_pred CCCCCCCceeeeCCCCceEEEeCCCceeeCcCCccc
Q psy6910 339 DDELPYGWERIDDPAYGTYYIDHVNKQTQYENPVLQ 374 (1145)
Q Consensus 339 ~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~ 374 (1145)
..+||.|||+..+++|++||+||.|++|+|+||+..
T Consensus 10 ~~~LP~gWe~~~~~~G~~Yy~nh~T~~ttWe~Pr~~ 45 (49)
T 2kpz_A 10 QGFLPKGWEVRHAPNGRPFFIDHNTKTTTWEDPRLK 45 (49)
T ss_dssp --CCCTTEEEEECTTSCEEEEETTTTEEESSCTTCC
T ss_pred CCCCCCCcEEEECCCCCEEEEECCCCCEecCCCCCC
Confidence 458999999999999999999999999999999875
No 399
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.80 E-value=2.9e-09 Score=113.08 Aligned_cols=84 Identities=31% Similarity=0.419 Sum_probs=74.8
Q ss_pred cceEEEEEEecccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCC
Q psy6910 434 GERIHSSLVKSLRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGE 513 (1145)
Q Consensus 434 g~~~~v~l~k~~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~ 513 (1145)
.....|.|.++..||||+|.++.+ ..+++|..|.++|||+++| |++||+|++|||+.+.++++.+++.+|+.. |.
T Consensus 8 ~~~r~v~l~k~~~glG~~l~~~~~--~~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~~~--g~ 82 (216)
T 2krg_A 8 LRPRLCTMKKGPSGYGFNLHSDKS--KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAG--GD 82 (216)
T ss_dssp CCCEEEEEECCSSSSCEEECCCSS--SCSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHHHH--CS
T ss_pred cceEEEEEEeCCCCceEEEEecCC--CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc--CC
Confidence 455788999999999999988754 2479999999999999999 999999999999999999999999999984 78
Q ss_pred eE-EEEEEeC
Q psy6910 514 TV-QLEVCRG 522 (1145)
Q Consensus 514 ~v-~l~v~R~ 522 (1145)
.| .|+|.|+
T Consensus 83 ~v~~l~V~R~ 92 (216)
T 2krg_A 83 ETKLLVVDRE 92 (216)
T ss_dssp EEEEEECCHH
T ss_pred eEEEEEEEEC
Confidence 88 8888775
No 400
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.79 E-value=2.4e-08 Score=88.72 Aligned_cols=69 Identities=28% Similarity=0.576 Sum_probs=61.3
Q ss_pred cceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEEEEEEeCC
Q psy6910 1043 RGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVRLLIKRGG 1118 (1145)
Q Consensus 1043 ~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~L~v~R~~ 1118 (1145)
..|||.+. .+++|..|.++|+|+++|+|++||+|++|||.++.++++.++.++|+..++.+.|+|.|++
T Consensus 13 ~~~g~~~~-------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~g 81 (81)
T 2rcz_A 13 EEYGLRLA-------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRDE 81 (81)
T ss_dssp CCCCEEEE-------EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEEEC--
T ss_pred CCCCEEEe-------CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEEEEEEeCC
Confidence 46888775 2689999999999999999999999999999999999999999999987778999998863
No 401
>1e0m_A Wwprototype; SH3 prototype, protein design, de novo protein; NMR {} SCOP: k.22.1.1
Probab=98.78 E-value=4.9e-09 Score=78.37 Aligned_cols=35 Identities=29% Similarity=0.622 Sum_probs=32.6
Q ss_pred CCCCCCceeeeCCCCceEEEeCCCceeeCcCCccc
Q psy6910 340 DELPYGWERIDDPAYGTYYIDHVNKQTQYENPVLQ 374 (1145)
Q Consensus 340 ~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~ 374 (1145)
.+||+||++..+++|++||+||.|++|+|++|+..
T Consensus 2 ~~LP~gW~~~~~~~G~~Yy~n~~t~~t~W~~P~~~ 36 (37)
T 1e0m_A 2 MGLPPGWDEYKTHNGKTYYYNHNTKTSTWTDPRMS 36 (37)
T ss_dssp CCSCTTEEEEECSSCCEEEEETTTTEEESSCTTTC
T ss_pred CCCCCCcEEEECCCCCEEEEECCCCCeeeeCcCCC
Confidence 37999999999999999999999999999999864
No 402
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.77 E-value=8.6e-09 Score=99.97 Aligned_cols=86 Identities=23% Similarity=0.309 Sum_probs=71.0
Q ss_pred ceEEEEEEecc--cceeEEEecCCCC-CCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy6910 435 ERIHSSLVKSL--RGLGFTIVGGDDS-KEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISP 511 (1145)
Q Consensus 435 ~~~~v~l~k~~--~glG~~i~gg~~~-~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~ 511 (1145)
+...+.+.+.. .+|||++....+. ...+++|..|.+++||+++|+|++||+|++|||+.+. ++.++..+|+.. .
T Consensus 19 ~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~--~~~~~~~~l~~~-~ 95 (124)
T 1wh1_A 19 ELEEVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQ--NREEAVALLTSE-E 95 (124)
T ss_dssp EECCBCCCCSSTTCCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCC--SHHHHHHHHTCS-S
T ss_pred eEEEEEEEecCCCCcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC--CHHHHHHHHHhC-C
Confidence 34455566654 4899999886542 1357999999999999999999999999999999998 589999999984 5
Q ss_pred CCeEEEEEEeCC
Q psy6910 512 GETVQLEVCRGY 523 (1145)
Q Consensus 512 g~~v~l~v~R~~ 523 (1145)
|..|.|+|.|+-
T Consensus 96 g~~v~l~v~R~g 107 (124)
T 1wh1_A 96 NKNFSLLIARPE 107 (124)
T ss_dssp CCSCCEEEEECS
T ss_pred CCEEEEEEEECC
Confidence 889999999873
No 403
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.76 E-value=2.5e-08 Score=96.73 Aligned_cols=92 Identities=24% Similarity=0.461 Sum_probs=73.5
Q ss_pred CcccEEEEeecCCc--ceeEEEEccCCc-ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcC
Q psy6910 1030 DEQYHAIELSRGTR--GFGFSIRGGREF-QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNG 1106 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~--~lG~sl~gg~~~-~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~ 1106 (1145)
..+.+.+.+.+... .|||.+...... ...+++|..|.++++|+++|+|++||+|++|||+.+. ++.++.++|+..
T Consensus 17 ~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~--~~~~~~~~l~~~ 94 (124)
T 1wh1_A 17 ELELEEVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQ--NREEAVALLTSE 94 (124)
T ss_dssp SCEECCBCCCCSSTTCCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCC--SHHHHHHHHTCS
T ss_pred cceEEEEEEEecCCCCcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC--CHHHHHHHHHhC
Confidence 34445556655443 799999875431 1258999999999999999999999999999999998 689999999985
Q ss_pred -CCeEEEEEEeCCCcCCC
Q psy6910 1107 -DSTVRLLIKRGGSVVAP 1123 (1145)
Q Consensus 1107 -~~~v~L~v~R~~~~~~~ 1123 (1145)
+..+.|+|.|++..+..
T Consensus 95 ~g~~v~l~v~R~g~~~~~ 112 (124)
T 1wh1_A 95 ENKNFSLLIARPELQLDE 112 (124)
T ss_dssp SCCSCCEEEEECSSCCCC
T ss_pred CCCEEEEEEEECCEEeec
Confidence 56799999998876443
No 404
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.74 E-value=5.7e-09 Score=110.83 Aligned_cols=87 Identities=24% Similarity=0.523 Sum_probs=76.6
Q ss_pred CcccEEEEeecCCcceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCe
Q psy6910 1030 DEQYHAIELSRGTRGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDST 1109 (1145)
Q Consensus 1030 ~~~~~~v~l~k~~~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~ 1109 (1145)
....+.|.|.++..+|||.+.++.+ ..+++|..|.++++|+++| |++||+|++|||..+.++++.+++.+|+..+..
T Consensus 7 ~~~~r~v~l~k~~~glG~~l~~~~~--~~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g~~ 83 (216)
T 2krg_A 7 MLRPRLCTMKKGPSGYGFNLHSDKS--KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDE 83 (216)
T ss_dssp TCCCEEEEEECCSSSSCEEECCCSS--SCSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHHHHCSE
T ss_pred ccceEEEEEEeCCCCceEEEEecCC--CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCe
Confidence 4566889999998899999987653 3489999999999999999 999999999999999999999999999987778
Q ss_pred E-EEEEEeCCC
Q psy6910 1110 V-RLLIKRGGS 1119 (1145)
Q Consensus 1110 v-~L~v~R~~~ 1119 (1145)
+ .|+|.|++.
T Consensus 84 v~~l~V~R~g~ 94 (216)
T 2krg_A 84 TKLLVVDRETD 94 (216)
T ss_dssp EEEEECCHHHH
T ss_pred EEEEEEEECCE
Confidence 8 888887654
No 405
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=98.73 E-value=1.8e-07 Score=111.78 Aligned_cols=169 Identities=12% Similarity=0.131 Sum_probs=101.8
Q ss_pred CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCC--------HHHHHHHHhcCCCCCeEEEEEEeCCCCCCCCCC
Q psy6910 460 EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYT--------HHDMVSVFQSISPGETVQLEVCRGYPLPFDPND 531 (1145)
Q Consensus 460 ~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~--------~~~~~~~l~~~~~g~~v~l~v~R~~~~~~~~~~ 531 (1145)
..+++|..|.|+|||++ + |++||+|++|||+.|.... ..+...++...+.|+.|+|+|.|+-..
T Consensus 276 ~~Gv~V~~V~~~spA~~-a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~------ 347 (539)
T 4fln_A 276 NEGVLVRRVEPTSDASK-V-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEH------ 347 (539)
T ss_dssp SBCEEEEEECTTSGGGG-T-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEE------
T ss_pred cCceeeecccCCChHHh-C-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEE------
Confidence 45899999999999985 5 9999999999999996532 122456677777899999999997310
Q ss_pred CCCcceecccccC-CCCCCCCCccccccCCcCCCCCCCCCCCCCCcccccccCCCCCccccccCCccEEEEEEec----C
Q psy6910 532 PNTEVVTTVAVNA-PDLDNGSDRHLYMSANDFTDQSVKSMPDLYTSEKMVKLERPSSTDLILESDSEYLTIPIVK----G 606 (1145)
Q Consensus 532 ~~~~~~~~~~~~~-p~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~k----~ 606 (1145)
..-++.+.. |-. .+.. ..... + + .+. ..-.....|.. .
T Consensus 348 ----~~v~Vtl~~~~~~-----~~~~---------~~~~~----p-~---~~~-----------~~Gl~f~~Lt~~~~~~ 390 (539)
T 4fln_A 348 ----KKVQVVLRPRVHL-----VPYH---------IDGGQ----P-S---YII-----------VAGLVFTPLSEPLIEE 390 (539)
T ss_dssp ----EEEEEECBCCCCS-----SCSC---------TTSSC----C-C---CCC-----------STTEEEEECCHHHHTT
T ss_pred ----EEEEEEEccCccc-----cccc---------cccCC----C-c---ccc-----------ccceEEeeCCHHHHHh
Confidence 000011000 000 0000 00000 0 0 000 00111112211 1
Q ss_pred --CCCcceEE----------eccCCcceEEEeec--ccccCCCCCCCEEEEECCEecCCCCHHHHHHHHhcCCCCceEEE
Q psy6910 607 --AMGFGFTI----------ADSSHGQKVKKILD--RQRCKNLAEGDILIEINNLNVRNMCHGEVVQVLKDCQRNLEANI 672 (1145)
Q Consensus 607 --~~glG~~i----------~~~~~g~~V~~i~~--a~~~g~L~~GD~Il~INg~~v~~~s~~ea~~~Lk~~~~g~~v~L 672 (1145)
...+|..+ .....|+.|.+|.+ ++...+++.||+|++|||+.|. +..+..++|++|. +..+.|
T Consensus 391 ~~~~~~~~~l~~~~~~~~~~~~~~~gVvvs~V~~~s~a~~~g~~~gdiI~~vNg~~V~--s~~~l~~~l~~~k-~~~l~~ 467 (539)
T 4fln_A 391 ECEDTIGLKLLTKARYSVARFRGEQIVILSQVLANEVNIGYEDMNNQQVLKFNGIPIR--NIHHLAHLIDMCK-DKYLVF 467 (539)
T ss_dssp SCSSSSCHHHHHHHHHCCCSSTTCCCEEEEEECCCGGGTTCSSCCSEEEEEETTEECC--SHHHHHHHHHTCC-SSEEEE
T ss_pred hcccccCceeeehhhhhhhccCCceEEEEEEecCCchhhhcCCCCCCEEEeECCEEcC--CHHHHHHHHHHcC-CCeEEE
Confidence 11222221 12234677888887 5555689999999999999999 6779999999995 567777
Q ss_pred EEEc
Q psy6910 673 IVQR 676 (1145)
Q Consensus 673 ~v~R 676 (1145)
.+..
T Consensus 468 ~~~~ 471 (539)
T 4fln_A 468 EFED 471 (539)
T ss_dssp EETT
T ss_pred EECC
Confidence 7654
No 406
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=98.73 E-value=1.4e-07 Score=112.74 Aligned_cols=166 Identities=14% Similarity=0.073 Sum_probs=100.2
Q ss_pred CCceEEEeCCCCcccccCCCCCCCEEEEECCeeecccCH--------HHHHHHH--HcCCCEEEEEEeCCCCCCCCCCCc
Q psy6910 944 AGSTIGRIIEDSPADRSGELHLGDHILAVNHVDIMSLHH--------GEIVNLI--KDSGYCVTLTIGAPISGDDASSTT 1013 (1145)
Q Consensus 944 ~g~~I~~v~~gs~A~~~G~L~~GD~Il~VNG~~v~~~~~--------~~~~~~l--~~~~~~v~L~v~r~~~~~~~~~~~ 1013 (1145)
.|++|..|.++|||++ + |+.||+|++|||+.|..... ..+..++ +..|+.|.|+|.|...........
T Consensus 277 ~Gv~V~~V~~~spA~~-a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~~~v~Vtl 354 (539)
T 4fln_A 277 EGVLVRRVEPTSDASK-V-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHKKVQVVL 354 (539)
T ss_dssp BCEEEEEECTTSGGGG-T-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEEEEEEEEC
T ss_pred CceeeecccCCChHHh-C-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEEEEEEEEE
Confidence 4899999999999986 4 99999999999999965321 1122333 347899999998754321111000
Q ss_pred ccC---ccCC-CCCCCCCCCCcccEEEEeecC------CcceeEEEE------ccCCcccccEEEEEEcCCChhcccCCC
Q psy6910 1014 SVS---AASH-REYEEGGEHDEQYHAIELSRG------TRGFGFSIR------GGREFQNMALFVLQIAENGPAALDGHL 1077 (1145)
Q Consensus 1014 s~~---~~~~-~~~p~~~~~~~~~~~v~l~k~------~~~lG~sl~------gg~~~~~~~v~V~~V~~gg~A~~~G~L 1077 (1145)
... .+.+ ...++............|... ...+++.+. .....+..+++|..|.++++|+..| +
T Consensus 355 ~~~~~~~~~~~~~~~p~~~~~~Gl~f~~Lt~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gVvvs~V~~~s~a~~~g-~ 433 (539)
T 4fln_A 355 RPRVHLVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQVLANEVNIGYE-D 433 (539)
T ss_dssp BCCCCSSCSCTTSSCCCCCCSTTEEEEECCHHHHTTSCSSSSCHHHHHHHHHCCCSSTTCCCEEEEEECCCGGGTTCS-S
T ss_pred ccCccccccccccCCCccccccceEEeeCCHHHHHhhcccccCceeeehhhhhhhccCCceEEEEEEecCCchhhhcC-C
Confidence 000 0000 000000000111111122110 001111110 0000124589999999999999999 9
Q ss_pred CCCCEEEEECCEEcCCCCHHHHHHHHHcCCCe-EEEEE
Q psy6910 1078 KVGDEIVEINGINTKNMTHAEAIEIIRNGDST-VRLLI 1114 (1145)
Q Consensus 1078 ~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~-v~L~v 1114 (1145)
+.||+|++|||++|. +..++.++|+++.+. +.|.+
T Consensus 434 ~~gdiI~~vNg~~V~--s~~~l~~~l~~~k~~~l~~~~ 469 (539)
T 4fln_A 434 MNNQQVLKFNGIPIR--NIHHLAHLIDMCKDKYLVFEF 469 (539)
T ss_dssp CCSEEEEEETTEECC--SHHHHHHHHHTCCSSEEEEEE
T ss_pred CCCCEEEeECCEEcC--CHHHHHHHHHHcCCCeEEEEE
Confidence 999999999999999 789999999998765 55544
No 407
>1ymz_A CC45; artificial protein, computational design, unknown function; NMR {Synthetic} SCOP: k.22.1.1
Probab=98.73 E-value=8e-09 Score=79.88 Aligned_cols=34 Identities=35% Similarity=0.635 Sum_probs=32.1
Q ss_pred CCCCCceeeeCCCCceEEEeCCCceeeCcCCccc
Q psy6910 341 ELPYGWERIDDPAYGTYYIDHVNKQTQYENPVLQ 374 (1145)
Q Consensus 341 ~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~ 374 (1145)
+||.||++..+.+|++||+||.|++|+|++|+..
T Consensus 8 ~LP~gW~~~~~~~Gr~YY~n~~T~~t~We~P~~~ 41 (43)
T 1ymz_A 8 PLPPGWERRTDVEGKVYYFNVRTLTTTWERPTII 41 (43)
T ss_dssp CCCSSEEEEECTTSCEEEEETTTTEEESSCCCSC
T ss_pred CCCCCCEEEECCCCCEEEEECCCCCCcccCCccc
Confidence 7999999999999999999999999999999753
No 408
>2jv4_A Peptidyl-prolyl CIS/trans isomerase; ppiase domain, WW domain group IV, rotamase; NMR {Emericella nidulans}
Probab=98.71 E-value=8.6e-09 Score=83.20 Aligned_cols=34 Identities=26% Similarity=0.535 Sum_probs=31.5
Q ss_pred CCCCCCcEEEEcc-CCceEeeeCCCCceeccCCcc
Q psy6910 294 GPLPPRWEKAYTE-KGEVYFIDHNSSTSSWLDPRL 327 (1145)
Q Consensus 294 ~pLP~gWe~~~~~-~Gr~yyidh~t~tT~W~~Pr~ 327 (1145)
.+||+||+++.+. .|++||+||.|++|+|++|..
T Consensus 6 ~~LP~GW~~~~~~~~Gr~YY~N~~T~~sqWe~P~~ 40 (54)
T 2jv4_A 6 TGLPAGWEVRHSNSKNLPYYFNPATRESRWEPPAD 40 (54)
T ss_dssp CCCCSSCCEEECSSSSCEEEEETTTTEEESSCCTT
T ss_pred CCCCCCcEEEEECCCCCEEEEECCCCcEEecCCCC
Confidence 5699999999986 799999999999999999974
No 409
>2e45_A Fe65 protein, amyloid beta A4 precursor protein-binding family B member 1; triple-stranded beta-sheet; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=98.70 E-value=9.6e-09 Score=80.83 Aligned_cols=33 Identities=24% Similarity=0.590 Sum_probs=31.0
Q ss_pred CCCCCCCcEEEEccCCceEeeeCCCCceeccCCc
Q psy6910 293 LGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPR 326 (1145)
Q Consensus 293 ~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr 326 (1145)
..+||+||+++.|.+| .||+||.|++|+|++|.
T Consensus 17 ~~~LPpGW~~~~D~sG-tYY~h~~T~tTQWerP~ 49 (55)
T 2e45_A 17 DSDLPAGWMRVQDTSG-TYYWHIPTGTTQWEPPG 49 (55)
T ss_dssp CSCCCTTEEEEEETTE-EEEEETTTCCEESSCCC
T ss_pred CCCCCCCCeEeecCCC-CEEEEcCCCCCccCCCC
Confidence 4569999999999999 99999999999999995
No 410
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.69 E-value=1.1e-07 Score=91.05 Aligned_cols=64 Identities=23% Similarity=0.383 Sum_probs=58.6
Q ss_pred cccEEEEEEcC--CChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEEEEEEeCCCcC
Q psy6910 1057 NMALFVLQIAE--NGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVRLLIKRGGSVV 1121 (1145)
Q Consensus 1057 ~~~v~V~~V~~--gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~L~v~R~~~~~ 1121 (1145)
..+++|..|.+ +++|+++| |++||+|++|||..+.+++++++.++|+..+..+.|+|.|++...
T Consensus 43 ~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~~~~dl~~~l~~~g~~v~l~v~R~g~~~ 108 (118)
T 2yub_A 43 ATTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRTLRVEEVEDAIKQTSQTLQLLIEHDPVPQ 108 (118)
T ss_dssp CCEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTSCHHHHHHHHHCCSSCEEEEEEECSSCC
T ss_pred CCcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHhCCCEEEEEEEECCEEE
Confidence 46899999999 99999999 999999999999999988889999999987667999999988754
No 411
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.66 E-value=4.5e-08 Score=93.82 Aligned_cols=73 Identities=18% Similarity=0.276 Sum_probs=61.7
Q ss_pred ceeEEEecCCCCCCccEEEEEecc--CCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEEEEEEeC
Q psy6910 447 GLGFTIVGGDDSKEEFLQIKSVVP--NGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQLEVCRG 522 (1145)
Q Consensus 447 glG~~i~gg~~~~~~~i~V~~v~~--~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 522 (1145)
||+|++.........+++|..|.+ ++||+++| |++||+|++|||..+.+++|.++..+|+.. |..|.|+|.|+
T Consensus 30 G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~~~~dl~~~l~~~--g~~v~l~v~R~ 104 (118)
T 2yub_A 30 GFSVTVESASSNYATTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRTLRVEEVEDAIKQT--SQTLQLLIEHD 104 (118)
T ss_dssp SSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTSCHHHHHHHHHCC--SSCEEEEEEEC
T ss_pred eEEEEeccccccCCCcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHhC--CCEEEEEEEEC
Confidence 555554433211245799999999 99999999 999999999999999999999999999985 88999999987
No 412
>2ysh_A GAS-7, growth-arrest-specific protein 7; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=98.65 E-value=2.4e-08 Score=75.94 Aligned_cols=35 Identities=29% Similarity=0.644 Sum_probs=32.6
Q ss_pred CCCCCCCceeeeCCCCceEEEeCCCceeeCcCCcc
Q psy6910 339 DDELPYGWERIDDPAYGTYYIDHVNKQTQYENPVL 373 (1145)
Q Consensus 339 ~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~ 373 (1145)
..+||.||++..+++|++||+||.|++|+|++|+.
T Consensus 5 ~~~LP~gW~~~~d~~Gr~YY~n~~T~~t~We~P~~ 39 (40)
T 2ysh_A 5 SSGLPPGWQSYLSPQGRRYYVNTTTNETTWERPSS 39 (40)
T ss_dssp CSSCCTTCEEEECTTSCEEEECSSSCCEESSSCCC
T ss_pred CCCCCCCceEEECCCCCEEEEECCCCCEeCCCCCC
Confidence 35899999999999999999999999999999974
No 413
>2ho2_A Fe65 protein, amyloid beta A4 protein-binding family B member 1; WW domain, beta sheet, Fe65, protein binding; 1.33A {Homo sapiens} SCOP: b.72.1.1 PDB: 2idh_A* 2oei_A
Probab=98.65 E-value=2e-08 Score=74.68 Aligned_cols=33 Identities=39% Similarity=0.682 Sum_probs=30.5
Q ss_pred CCCCCceeeeCCCCceEEEeCCCceeeCcCCccc
Q psy6910 341 ELPYGWERIDDPAYGTYYIDHVNKQTQYENPVLQ 374 (1145)
Q Consensus 341 ~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~ 374 (1145)
+||+|||++.|..| +||+||.+++|||++|+..
T Consensus 3 ~LP~GWe~~~d~~g-~YY~n~~t~~tqWe~P~~~ 35 (38)
T 2ho2_A 3 DLPAGWMRVQDTSG-TYYWHIPTGTTQWEPPGRA 35 (38)
T ss_dssp CSCTTEEEEECSSC-EEEEETTTTEEESSCCCC-
T ss_pred cCCCCceEEEeCCC-CEEEecCCCCEeccCCCCC
Confidence 69999999999988 9999999999999999754
No 414
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=98.61 E-value=5e-08 Score=103.36 Aligned_cols=143 Identities=27% Similarity=0.277 Sum_probs=119.4
Q ss_pred CCcEEEEEecCCccCcccchhccccCCCCchHHHHhhhhccCcceeecccccCCCCCCCcCCccEEEeCHHHHHHHHHcC
Q psy6910 99 GKTLTLRTVSSAYVTTDLRQFLNTRFPKGSVDHDLQNIIRDNLYLRTVPVTTRTPRDGELNGVDYTFLSIEEFKQLEKSG 178 (1145)
Q Consensus 99 ~~~v~~~~~p~~~~~~~~~~~~~l~f~k~~i~~~l~~~~~~~~~~~~v~~TTR~~r~~E~~g~~Y~fvs~~~f~~~~~~~ 178 (1145)
.|.++..++|+|++ |+|+++.|...+ +.++. .+.+++|+++.++..|+.|.|.+.+.|..+...+
T Consensus 19 ~Gei~~l~GpnGsG-------------KSTLl~~l~gl~-~~i~~-~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~ 83 (207)
T 1znw_A 19 VGRVVVLSGPSAVG-------------KSTVVRCLRERI-PNLHF-SVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQG 83 (207)
T ss_dssp CCCEEEEECSTTSS-------------HHHHHHHHHHHS-TTCEE-CCCEESSCCCTTCCBTTTBEECCHHHHHHHHHTT
T ss_pred CCCEEEEECCCCCC-------------HHHHHHHHHhhC-CceEE-cccccccCCcccccCCCeeEecCHHHHHHHHhcC
Confidence 89999999999996 788888777665 34553 6899999999899999999999999999999999
Q ss_pred CEEEEEEeCC--cccCCCccchhhhhcCCCCceeeecCCCChhhhhhhhcccccccceeEecCCChhhhhhhhhccCCCC
Q psy6910 179 CLLESGLYEG--NHYGTPKPVKEPYVSLPQNVNLLPGAHPSSEGKRKRNRSNVEAMASKSIEPDMKTNGFDNKTVNMGNS 256 (1145)
Q Consensus 179 ~flE~~~~~g--~~YGt~~~~i~~~~~~g~~~~~il~~~~~~~~~~~~~~~~~~~~~~ifi~pps~~~l~~rl~~rg~~s 256 (1145)
.|++|..+.+ ++||+++..+++.+.+++ .++++++. .++..+++.++... .+|+..|++..|.+++..++.+.
T Consensus 84 ~l~~~~~~~~n~~~~g~~~~~~~~~~~~~~--~~~~~l~~--~gl~~~~~~~~~~l-S~l~~~p~~~~LDep~~~l~~~~ 158 (207)
T 1znw_A 84 ELLEWAEIHGGLHRSGTLAQPVRAAAATGV--PVLIEVDL--AGARAIKKTMPEAV-TVFLAPPSWQDLQARLIGRGTET 158 (207)
T ss_dssp CEEEEEEEGGGTEEEEEEHHHHHHHHHHTC--CEEEECCH--HHHHHHHHHCTTSE-EEEEECSCHHHHHHHHHTTSCSC
T ss_pred CceeehhhcCchhhcCCcHHHHHHHHHcCC--eEEEEeCH--HHHHHHHHhcCCcE-EEEEECCCHHHHHHHHHhcCCCC
Confidence 9999999988 899999988888888765 66666443 56666777777777 79999999999999999998765
Q ss_pred ccccc
Q psy6910 257 SDYEL 261 (1145)
Q Consensus 257 ~~~i~ 261 (1145)
+..+.
T Consensus 159 d~~~~ 163 (207)
T 1znw_A 159 ADVIQ 163 (207)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55444
No 415
>1jmq_A YAP65, 65 kDa YES-associated protein; polyproline ligand, YAP65 mutant, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1k9q_A* 1k9r_A 1k5r_A* 2lax_A* 2lay_A*
Probab=98.58 E-value=3e-08 Score=77.83 Aligned_cols=37 Identities=27% Similarity=0.616 Sum_probs=34.1
Q ss_pred CCCCCCCceeeeCCCCceEEEeCCCceeeCcCCcccc
Q psy6910 339 DDELPYGWERIDDPAYGTYYIDHVNKQTQYENPVLQA 375 (1145)
Q Consensus 339 ~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~~ 375 (1145)
..+||.||+.+.++.|+.||+||.+++|+|+||+...
T Consensus 6 ~~~LP~GWe~~~~~~gr~y~~n~~t~~t~W~dPr~~~ 42 (46)
T 1jmq_A 6 DVPLPAGWEMAKTSSGQRYFKNHIDQTTTWQDPRKAM 42 (46)
T ss_dssp SCCCCTTBCCBCCSSCCCBEEETTTTEEESSCTTTSS
T ss_pred CCCCCcCcEEEEcCCCceEEEEecCCceeecCCCchh
Confidence 3589999999999999999999999999999999763
No 416
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=98.56 E-value=1.9e-08 Score=108.87 Aligned_cols=36 Identities=25% Similarity=0.684 Sum_probs=34.1
Q ss_pred CCCCCCcEEEEccCCceEeeeCCCCceeccCCcchh
Q psy6910 294 GPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRLCK 329 (1145)
Q Consensus 294 ~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~~~ 329 (1145)
+|||+|||++++++|++|||||+|+||+|.||++..
T Consensus 10 ~~l~~~we~~~~~~~~~y~~~h~~~tt~w~~p~~~~ 45 (261)
T 1eg3_A 10 TSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTE 45 (261)
T ss_dssp TTCCTTEEEEECTTSCEEEEETTTTEEESSCHHHHH
T ss_pred CCCCCCcceeECCCCCeEeecCCcccccCCCCchhh
Confidence 789999999999999999999999999999998654
No 417
>2l5f_A PRE-mRNA-processing factor 40 homolog A; 2WW, HYPA, FBP11, protein binding; NMR {Homo sapiens}
Probab=98.52 E-value=2.3e-08 Score=90.93 Aligned_cols=69 Identities=19% Similarity=0.226 Sum_probs=55.3
Q ss_pred CCCCCCCceeeeCCCCceEEEeCCCceeeCcCCccccccCCCCCCCCCCCCCCCc-ccCCCCcccCCCCCCCccc
Q psy6910 339 DDELPYGWERIDDPAYGTYYIDHVNKQTQYENPVLQAKHRDQGAGPSEMDDNEHK-VKDSPGKRIAPQARNTLVS 412 (1145)
Q Consensus 339 ~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~~~~~~~~~~~~~~~p~~w~-~~~~~g~~~~~~h~~~~~s 412 (1145)
...||.+|++..+++|++||+||.|++++|++|....... ...++|.+|+ ..+..|+.||.|+.....+
T Consensus 9 ~~~lp~~W~e~~~~~Gr~YYyN~~T~~s~We~P~~~~~~~-----e~~~~~~~W~~~~~~~Gr~Yy~N~~T~~s~ 78 (92)
T 2l5f_A 9 ASGAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPA-----EQLLSKCPWKEYKSDSGKTYYYNSQTKESR 78 (92)
T ss_dssp TTBTTTTEEEEECTTSCEEEEETTTTEEESSCSGGGTCHH-----HHHHHSCSEEEEECTTCCEEEEETTTTEEE
T ss_pred CCCCCCCcEEEEcCCCCEEEEECCCCceecccCccccccc-----cccccccceEEEECCCCCEEEEECCCCCee
Confidence 4579999999999999999999999999999997543211 1124678999 7788999999988665443
No 418
>2ysc_A Amyloid beta A4 precursor protein-binding family B member 3; Fe65-like protein 2, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=98.48 E-value=1e-07 Score=71.34 Aligned_cols=33 Identities=39% Similarity=0.725 Sum_probs=30.4
Q ss_pred CCCCCCCceeeeCCCCceEEEeCCCceeeCcCCc
Q psy6910 339 DDELPYGWERIDDPAYGTYYIDHVNKQTQYENPV 372 (1145)
Q Consensus 339 ~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~ 372 (1145)
..+||+|||++.++.| .||+||.|+.|||++|+
T Consensus 6 ~~~LP~GWe~~~~~~G-~YY~n~~t~~tqWe~P~ 38 (39)
T 2ysc_A 6 SGGLPPGWRKIHDAAG-TYYWHVPSGSTQWQRPT 38 (39)
T ss_dssp CCCCCTTEEEEEETTE-EEEEESSSCCEESSCCC
T ss_pred CCCCCCCcEEEEcCCC-CEEEEcCCCCEeccCCC
Confidence 4589999999999998 69999999999999995
No 419
>3olm_A E3 ubiquitin-protein ligase RSP5; ligase; 2.50A {Saccharomyces cerevisiae}
Probab=98.47 E-value=3.3e-08 Score=115.37 Aligned_cols=38 Identities=53% Similarity=1.045 Sum_probs=35.0
Q ss_pred cCCCCCCCCcEEEEccCCceEeeeCCCCceeccCCcch
Q psy6910 291 LDLGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPRLC 328 (1145)
Q Consensus 291 ~~~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr~~ 328 (1145)
+..+|||+|||++++++|++|||||+|+||+|.|||..
T Consensus 4 ~~~~~lP~gWe~~~~~~g~~y~i~h~~~~t~w~~Pr~~ 41 (429)
T 3olm_A 4 SQLGPLPSGWEMRLTNTARVYFVDHNTKTTTWDDPRLP 41 (429)
T ss_dssp -CCCCCCTTCCCCCSSCCCCCEEETTTTEEESSCTTSC
T ss_pred ccCCCCCCCceeEECCCCCeEEEeCCCcceeccCCCCC
Confidence 45789999999999999999999999999999999864
No 420
>1o6w_A PRP40, PRE-mRNA processing protein PRP40; WW domain PAIR, nuclear protein, mRNA splicing, ribonucleoprotein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1 b.72.1.1
Probab=98.46 E-value=1.5e-08 Score=88.72 Aligned_cols=64 Identities=20% Similarity=0.298 Sum_probs=52.5
Q ss_pred CCceeeeCCCCceEEEeCCCceeeCcCCccccccCCCCCCCCCCCCCCCc-ccCCCCcccCCCCCCCccc
Q psy6910 344 YGWERIDDPAYGTYYIDHVNKQTQYENPVLQAKHRDQGAGPSEMDDNEHK-VKDSPGKRIAPQARNTLVS 412 (1145)
Q Consensus 344 ~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~~~~~~~~~~~~~~~p~~w~-~~~~~g~~~~~~h~~~~~s 412 (1145)
.+|++..+++|++||+||.|++++|++|+...... ....+|.+|+ ..+..|+.||.||....++
T Consensus 2 ~~W~~~~~~~Gr~YY~n~~T~~s~W~~P~~~~~~~-----~~~~lp~gW~~~~~~~Gr~Yy~n~~t~~t~ 66 (75)
T 1o6w_A 2 SIWKEAKDASGRIYYYNTLTKKSTWEKPKELISQE-----ELLLRENGWKAAKTADGKVYYYNPTTRETS 66 (75)
T ss_dssp CCEEEEECTTCCEEEEETTTTEEESSCCHHHHHHH-----HHHHHHHTCEEEECTTCCEEEEETTTTEEE
T ss_pred CCCeEEECCCCCeEEEECCCCCEEeecchhhcccc-----cccCCCCeEEEEECCCCCEEEEECCCCCEE
Confidence 48999999999999999999999999997643321 1235788999 7888999999999776554
No 421
>2jv4_A Peptidyl-prolyl CIS/trans isomerase; ppiase domain, WW domain group IV, rotamase; NMR {Emericella nidulans}
Probab=98.38 E-value=2.9e-07 Score=74.28 Aligned_cols=36 Identities=25% Similarity=0.565 Sum_probs=32.6
Q ss_pred CCCCCCCceeeeCC-CCceEEEeCCCceeeCcCCccc
Q psy6910 339 DDELPYGWERIDDP-AYGTYYIDHVNKQTQYENPVLQ 374 (1145)
Q Consensus 339 ~~~LP~gWe~~~~~-~g~~yyinh~~k~t~~~~P~~~ 374 (1145)
..+||+||+.+.+. .|++||+||.|++|||++|...
T Consensus 5 ~~~LP~GW~~~~~~~~Gr~YY~N~~T~~sqWe~P~~~ 41 (54)
T 2jv4_A 5 NTGLPAGWEVRHSNSKNLPYYFNPATRESRWEPPADT 41 (54)
T ss_dssp CCCCCSSCCEEECSSSSCEEEEETTTTEEESSCCTTS
T ss_pred CCCCCCCcEEEEECCCCCEEEEECCCCcEEecCCCCc
Confidence 45799999999987 8999999999999999999754
No 422
>3tc5_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; PIN1 mutant (R14A), oncogenic transformation, small molecule cycle, rotamase, phosphoprotein; HET: 3T5 P6G; 1.40A {Homo sapiens} PDB: 2itk_A* 2q5a_A* 2xp3_A* 2xp4_A* 2xp5_A* 2xp7_A* 2xp8_A* 2xp9_A* 2xpa_A* 2xpb_A* 3kab_A* 3kag_A* 3kah_A* 3kai_A* 3kce_A* 3ntp_A* 3odk_A* 3oob_A* 2zr6_A* 1f8a_B* ...
Probab=98.36 E-value=1.8e-07 Score=94.89 Aligned_cols=35 Identities=40% Similarity=0.840 Sum_probs=29.2
Q ss_pred CCCCCCCcEEEEc-cCCceEeeeCCCCceeccCCcc
Q psy6910 293 LGPLPPRWEKAYT-EKGEVYFIDHNSSTSSWLDPRL 327 (1145)
Q Consensus 293 ~~pLP~gWe~~~~-~~Gr~yyidh~t~tT~W~~Pr~ 327 (1145)
.++||+|||++++ ..|++||+||+|++|+|++|+.
T Consensus 7 ~~~LP~gWe~~~~~~~g~~yy~n~~t~~t~We~P~~ 42 (166)
T 3tc5_A 7 EEKLPPGWEKAMSRSSGRVYYFNHITNASQWERPSG 42 (166)
T ss_dssp ---CCTTEEEEECTTTCCEEEEETTTCCEESSCC--
T ss_pred CCCCCCCceEEEcCCCCCEEEEECCCCCEEecCCCC
Confidence 4689999999999 5899999999999999999974
No 423
>2e45_A Fe65 protein, amyloid beta A4 precursor protein-binding family B member 1; triple-stranded beta-sheet; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=98.29 E-value=4.4e-07 Score=71.49 Aligned_cols=33 Identities=39% Similarity=0.689 Sum_probs=30.8
Q ss_pred CCCCCCceeeeCCCCceEEEeCCCceeeCcCCcc
Q psy6910 340 DELPYGWERIDDPAYGTYYIDHVNKQTQYENPVL 373 (1145)
Q Consensus 340 ~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~ 373 (1145)
..||+||+++.|+.| +||+||.|++|||+.|..
T Consensus 18 ~~LPpGW~~~~D~sG-tYY~h~~T~tTQWerP~~ 50 (55)
T 2e45_A 18 SDLPAGWMRVQDTSG-TYYWHIPTGTTQWEPPGR 50 (55)
T ss_dssp SCCCTTEEEEEETTE-EEEEETTTCCEESSCCCC
T ss_pred CCCCCCCeEeecCCC-CEEEEcCCCCCccCCCCC
Confidence 479999999999998 999999999999999954
No 424
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.27 E-value=3.4e-07 Score=83.45 Aligned_cols=58 Identities=28% Similarity=0.443 Sum_probs=52.0
Q ss_pred cEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcC--CCeEEEEEEeCCCc
Q psy6910 1059 ALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNG--DSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1059 ~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~--~~~v~L~v~R~~~~ 1120 (1145)
+++|..|.++|||++ | |++||+|++|||.++. ++.++..+|+.. +.++.|+|.|++..
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~~ 61 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQ--SAEKLIDYISSKKAGDKVTLKIEREEKE 61 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCS--SHHHHHHHHSSCCSSCEECEEEESSSCE
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEECC--CHHHHHHHHHcCCCCCEEEEEEEECCEE
Confidence 567899999999999 9 9999999999999998 678999999875 57799999998764
No 425
>2jx8_A Hpcif1, phosphorylated CTD-interacting factor 1; protein fragment, WW domain, triple-standed beta-sheet, alpha-helix, nucleus, phosphorylation; NMR {Homo sapiens}
Probab=98.27 E-value=2.1e-07 Score=74.53 Aligned_cols=35 Identities=23% Similarity=0.541 Sum_probs=31.3
Q ss_pred CCCCCCcEEEEcc-CCceEeeeCCCCceeccCCcch
Q psy6910 294 GPLPPRWEKAYTE-KGEVYFIDHNSSTSSWLDPRLC 328 (1145)
Q Consensus 294 ~pLP~gWe~~~~~-~Gr~yyidh~t~tT~W~~Pr~~ 328 (1145)
..||+||+++++. .|+.||+|+.|++|+|++|+..
T Consensus 9 ~~LP~gW~~~~~~~~gr~YY~N~~T~~SqWe~P~~~ 44 (52)
T 2jx8_A 9 ELVHAGWEKCWSRRENRPYYFNRFTNQSLWEMPVLG 44 (52)
T ss_dssp HHHHHTCCEEEETTTTEEEEEETTTTEEESSCCCCT
T ss_pred CCCCcCcEEEEccccCCEEEEECCCCCEEeCCCCCC
Confidence 3599999999985 6999999999999999999743
No 426
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.25 E-value=1.9e-06 Score=77.70 Aligned_cols=60 Identities=18% Similarity=0.212 Sum_probs=51.6
Q ss_pred ccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHc--CCCeEEEEEEeCCCc
Q psy6910 1058 MALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRN--GDSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1058 ~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~--~~~~v~L~v~R~~~~ 1120 (1145)
.++.|..+.|+++|+++| |++||+|++|||+++. ++.++.++++. .+..+.|+|.|++..
T Consensus 19 ~G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v~--~~~d~~~~~~~~~~g~~v~l~v~R~g~~ 80 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLT--DPNVMNTLFQSMNEMTEMSLTVERDGQQ 80 (87)
T ss_dssp EEEEEEECSCHHHHHHTT-CCTTCEEEEETTEETT--CHHHHHHHHHTGGGCSEEEEEEEETTEE
T ss_pred EEEEEEeCCCCCHHHHCC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 367788888888999999 9999999999999998 78888888875 356799999998753
No 427
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.22 E-value=6.4e-07 Score=81.60 Aligned_cols=57 Identities=25% Similarity=0.334 Sum_probs=51.9
Q ss_pred cEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEEEEEEeC
Q psy6910 462 FLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQLEVCRG 522 (1145)
Q Consensus 462 ~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 522 (1145)
+++|..|.++|||++ | |++||+|++|||..+.. ..++..+|+..+.|+.|+|+|.|+
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~ 58 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQS--AEKLIDYISSKKAGDKVTLKIERE 58 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCSS--HHHHHHHHSSCCSSCEECEEEESS
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEECCC--HHHHHHHHHcCCCCCEEEEEEEEC
Confidence 478899999999998 8 99999999999999984 579999999876799999999986
No 428
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.22 E-value=3e-06 Score=78.63 Aligned_cols=60 Identities=32% Similarity=0.432 Sum_probs=53.0
Q ss_pred cccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHc--CCCeEEEEEEeCCCc
Q psy6910 1057 NMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRN--GDSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1057 ~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~--~~~~v~L~v~R~~~~ 1120 (1145)
..+++|..|.++|||+. | |++||+|++|||..+. +++++..+|.. .+..+.|+|.|++..
T Consensus 6 ~~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~R~g~~ 67 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-V-LHAGDLITEIDGNAFK--SSQEFIDYIHSKKVGDTVKINYKHGDKN 67 (100)
T ss_dssp CCCEEEEEECTTSGGGG-T-CCTTCEEEEETTBCCS--SHHHHHHHHHTSCTTCEEEEEEEETTEE
T ss_pred CCCEEEEEeCCCCchHH-C-CCCCCEEEEECCEECC--CHHHHHHHHHhCCCCCEEEEEEEECCEE
Confidence 45899999999999995 8 9999999999999998 78999999986 356799999998764
No 429
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.18 E-value=3.5e-06 Score=79.99 Aligned_cols=60 Identities=23% Similarity=0.422 Sum_probs=54.3
Q ss_pred cccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEEEEEEeCCCc
Q psy6910 1057 NMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1057 ~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~L~v~R~~~~ 1120 (1145)
..+++|..|.++|||+++| |++||+|++|||..+. ++.++..+|+. +..+.|++.|++..
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~-~~~v~l~v~R~g~~ 93 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQ--NAEDVYEAVRT-QSQLAVQIRRGRET 93 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHHH-CSSEEEEEEETTEE
T ss_pred CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHhC-CCeEEEEEEECCEE
Confidence 3589999999999999999 9999999999999998 68999999987 57899999998754
No 430
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.18 E-value=3e-06 Score=77.78 Aligned_cols=57 Identities=23% Similarity=0.214 Sum_probs=50.7
Q ss_pred EEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCC--CeEEEEEEeCCC
Q psy6910 1060 LFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGD--STVRLLIKRGGS 1119 (1145)
Q Consensus 1060 v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~--~~v~L~v~R~~~ 1119 (1145)
.+|..|.++|+|+++| |++||+|++|||+.+. +++++...|.... ..+.|+|.|++.
T Consensus 4 p~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~d~~~~l~~~~~~~~v~l~v~R~g~ 62 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQ-IAPGTELKAVDGIETP--DWDAVRLQLVDKIGDESTTITVAPFGS 62 (95)
T ss_dssp CBEEEECTTSHHHHTT-CCTTCEEEEETTEECS--SHHHHHHHHHHTTTCSEEEEEEECTTC
T ss_pred CEEEeeCCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHHhcCCCcEEEEEEECCC
Confidence 4689999999999999 9999999999999998 7899999887643 579999999874
No 431
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.18 E-value=1.8e-06 Score=79.13 Aligned_cols=60 Identities=27% Similarity=0.422 Sum_probs=53.3
Q ss_pred cccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcC--CCeEEEEEEeCCCc
Q psy6910 1057 NMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNG--DSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1057 ~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~--~~~v~L~v~R~~~~ 1120 (1145)
..+++|..|.++|||++ | |++||+|++|||.++. ++.++..+|+.. +..+.|+|.|++..
T Consensus 4 ~~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~~ 65 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPIN--TSEQIVSYVREKQAGDRVRVTFIRDRKQ 65 (94)
T ss_dssp CCCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCC--CHHHHHHHHHHSCTTCCEEEEEEETTEE
T ss_pred CCcEEEEEECCCChHHh-C-CCCCCEEEEECCEECC--CHHHHHHHHHhCCCCCEEEEEEEECCEE
Confidence 35789999999999999 8 9999999999999998 678999999874 67899999998864
No 432
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.16 E-value=4.4e-06 Score=77.47 Aligned_cols=59 Identities=22% Similarity=0.347 Sum_probs=52.4
Q ss_pred CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEEEEEEeC
Q psy6910 460 EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQLEVCRG 522 (1145)
Q Consensus 460 ~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 522 (1145)
..+++|..|.+++||+. | |++||+|++|||+.+. +..++..+|+....|..|.|+|.|+
T Consensus 6 ~~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~R~ 64 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-V-LHAGDLITEIDGNAFK--SSQEFIDYIHSKKVGDTVKINYKHG 64 (100)
T ss_dssp CCCEEEEEECTTSGGGG-T-CCTTCEEEEETTBCCS--SHHHHHHHHHTSCTTCEEEEEEEET
T ss_pred CCCEEEEEeCCCCchHH-C-CCCCCEEEEECCEECC--CHHHHHHHHHhCCCCCEEEEEEEEC
Confidence 35799999999999995 7 9999999999999997 4578899998876789999999986
No 433
>2jxw_A WW domain-binding protein 4; WW domain containing protein, FBP21, WBP4, metal- binding, mRNA processing, mRNA splicing, nucleus, polymorphism; NMR {Homo sapiens}
Probab=98.16 E-value=1.1e-06 Score=76.79 Aligned_cols=62 Identities=13% Similarity=0.005 Sum_probs=49.8
Q ss_pred CCceeeeCCCCceEEEeCCCceeeCcCCccccccCCCCCCCCCCCCCCCc-ccCCCCcccCCCCCCCc
Q psy6910 344 YGWERIDDPAYGTYYIDHVNKQTQYENPVLQAKHRDQGAGPSEMDDNEHK-VKDSPGKRIAPQARNTL 410 (1145)
Q Consensus 344 ~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~~~~~~~~~~~~~~~p~~w~-~~~~~g~~~~~~h~~~~ 410 (1145)
.+|++..+++|++||+||.|++++|+.|...... ....+++.+|+ ..+..|+.||.|+....
T Consensus 5 ~~W~e~~~~~G~~YYyN~~T~~s~We~P~~~~~~-----~e~~~~~~~W~~~~~~~Gr~YyyN~~T~~ 67 (75)
T 2jxw_A 5 GRWVEGITSEGYHYYYDLISGASQWEKPEGFQGD-----LKKTAVKTVWVEGLSEDGFTYYYNTETGE 67 (75)
T ss_dssp CCEEEEEETTTEEEEEETTTTEEECSCCSSCSSC-----CSSSSCCCSEEEEEETTTEEEEEETTTTE
T ss_pred CCcEEEECCCCCEEEEECCCCCEeecCCCccccc-----ccccCCCccEEEEECCCCCEEEEECcCCC
Confidence 5799999999999999999999999999753221 12346788999 67779999998875543
No 434
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.15 E-value=4.5e-06 Score=81.82 Aligned_cols=60 Identities=18% Similarity=0.269 Sum_probs=53.4
Q ss_pred cccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcC--CCeEEEEEEeCCCc
Q psy6910 1057 NMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNG--DSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1057 ~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~--~~~v~L~v~R~~~~ 1120 (1145)
..+++|..|.++|||+ +| |++||+|++|||..+. ++.++..+|+.. +..+.|+|.|++..
T Consensus 56 ~~g~~V~~V~~~spA~-aG-L~~GD~I~~inG~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~~ 117 (134)
T 2l97_A 56 TSGVIVRSVQSNMPAN-GH-LEKYDVITKVDDKEIA--SSTDLQSALYNHSIGDTIKITYYRNGKE 117 (134)
T ss_dssp CSCEEEEECSTTSGGG-TT-SCSSCEEEEETTEECC--CHHHHHHHHHHSSTTCEEEEEEEETTEE
T ss_pred CCCEEEEEECCCCchH-HC-CCCCCEEEEECCEEcC--CHHHHHHHHHhCCCCCEEEEEEEECCEE
Confidence 3589999999999999 99 9999999999999998 678888888874 67899999998754
No 435
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.14 E-value=2.3e-06 Score=78.43 Aligned_cols=58 Identities=26% Similarity=0.386 Sum_probs=52.6
Q ss_pred ccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEEEEEEeC
Q psy6910 461 EFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQLEVCRG 522 (1145)
Q Consensus 461 ~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 522 (1145)
.+++|.+|.++|||++ | |++||+|++|||..+.+ ..++..+|+..+.|+.|.|+|.|+
T Consensus 5 ~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~ 62 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPINT--SEQIVSYVREKQAGDRVRVTFIRD 62 (94)
T ss_dssp CCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCCC--HHHHHHHHHHSCTTCCEEEEEEET
T ss_pred CcEEEEEECCCChHHh-C-CCCCCEEEEECCEECCC--HHHHHHHHHhCCCCCEEEEEEEEC
Confidence 4699999999999998 8 99999999999999985 578999999876799999999996
No 436
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.12 E-value=3.1e-06 Score=76.91 Aligned_cols=59 Identities=25% Similarity=0.445 Sum_probs=51.6
Q ss_pred cEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcC-CCeEEEEEEeCCCc
Q psy6910 1059 ALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNG-DSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1059 ~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~-~~~v~L~v~R~~~~ 1120 (1145)
+++|..|.++|+|+++| |++||+|++|||..+. ++.++...|+.. +..+.|++.|++..
T Consensus 5 ~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R~g~~ 64 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAG-LQAGDRIVXVDGQPLT--QWVTFVMLVRDNPGXSLALEIERQGSP 64 (91)
T ss_dssp -CBCSEECTTSHHHHTT-CCTTCEEEEETTEECC--CHHHHHHHHHHCTTCCEEEEEEETTEE
T ss_pred CeEEEEECCCChHHhcC-CCCCCEEEEECCeEcC--CHHHHHHHHhcCCCCeEEEEEEECCeE
Confidence 45788999999999999 9999999999999998 789999988864 46799999998754
No 437
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.10 E-value=3.7e-06 Score=75.83 Aligned_cols=58 Identities=24% Similarity=0.188 Sum_probs=50.1
Q ss_pred cEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEEEEEEeC
Q psy6910 462 FLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQLEVCRG 522 (1145)
Q Consensus 462 ~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 522 (1145)
++.|..+.|++||++.| |++||+|++|||..+. +..++.++++..+.|..+.|+|.|+
T Consensus 20 G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v~--~~~d~~~~~~~~~~g~~v~l~v~R~ 77 (87)
T 2i6v_A 20 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLT--DPNVMNTLFQSMNEMTEMSLTVERD 77 (87)
T ss_dssp EEEEEECSCHHHHHHTT-CCTTCEEEEETTEETT--CHHHHHHHHHTGGGCSEEEEEEEET
T ss_pred EEEEEeCCCCCHHHHCC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEEC
Confidence 57788888888889999 9999999999999998 4567778888766688999999986
No 438
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.08 E-value=6.1e-06 Score=78.18 Aligned_cols=60 Identities=28% Similarity=0.469 Sum_probs=53.3
Q ss_pred cccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEEEEEEeCCCc
Q psy6910 1057 NMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1057 ~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~L~v~R~~~~ 1120 (1145)
..+++|..|.++|+|+++| |++||+|++|||..+. ++.++...|+ .+..+.|+|.|++..
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~-~g~~v~l~v~R~g~~ 93 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLV--DSSELQEAVL-TESPLLLEVRRGNDD 93 (112)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHH-HCSSEEEEEEETTEE
T ss_pred CCCeEEEEECCCChHHHCC-CCCCCEEEEECCEECC--CHHHHHHHHh-CCCeEEEEEEECCEE
Confidence 3579999999999999999 9999999999999998 7788888885 467899999998754
No 439
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.05 E-value=9.1e-06 Score=79.63 Aligned_cols=58 Identities=29% Similarity=0.377 Sum_probs=52.3
Q ss_pred ccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEEEEEEeC
Q psy6910 461 EFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQLEVCRG 522 (1145)
Q Consensus 461 ~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 522 (1145)
.+++|.+|.++|||+ +| |++||+|++|||+.+.+ ..++..+|+..+.|+.|+|+|.|+
T Consensus 57 ~g~~V~~V~~~spA~-aG-L~~GD~I~~inG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~ 114 (134)
T 2l97_A 57 SGVIVRSVQSNMPAN-GH-LEKYDVITKVDDKEIAS--STDLQSALYNHSIGDTIKITYYRN 114 (134)
T ss_dssp SCEEEEECSTTSGGG-TT-SCSSCEEEEETTEECCC--HHHHHHHHHHSSTTCEEEEEEEET
T ss_pred CCEEEEEECCCCchH-HC-CCCCCEEEEECCEEcCC--HHHHHHHHHhCCCCCEEEEEEEEC
Confidence 569999999999999 88 99999999999999985 568888888876799999999986
No 440
>2ysi_A Transcription elongation regulator 1; Ca150, FBP28, WW domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.22.1.1
Probab=98.03 E-value=5e-06 Score=62.75 Aligned_cols=34 Identities=24% Similarity=0.549 Sum_probs=31.3
Q ss_pred CCCCCCCcEEEEccCCceEeeeCCCCceeccCCc
Q psy6910 293 LGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPR 326 (1145)
Q Consensus 293 ~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr 326 (1145)
.-|+|.+|++..+++|+.||+|..|+.++|++|.
T Consensus 5 ~~~~~~~W~e~~~~~G~~YYyN~~T~eS~We~P~ 38 (40)
T 2ysi_A 5 SSGTEEIWVENKTPDGKVYYYNARTRESAWTKPD 38 (40)
T ss_dssp CCCCCCSEEEEECTTSCEEEEETTTCCEESSCCS
T ss_pred cCCCCCCCEEEECCCCCEEEEECCCCCEEeCCCC
Confidence 3468899999999999999999999999999994
No 441
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.03 E-value=7.6e-06 Score=75.07 Aligned_cols=57 Identities=14% Similarity=0.042 Sum_probs=50.2
Q ss_pred EEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEEEEEEeC
Q psy6910 463 LQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQLEVCRG 522 (1145)
Q Consensus 463 i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 522 (1145)
.+|..|.++|||++.| |++||+|++|||+.+. +..++...|.....+..|.|+|.|+
T Consensus 4 p~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~d~~~~l~~~~~~~~v~l~v~R~ 60 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQ-IAPGTELKAVDGIETP--DWDAVRLQLVDKIGDESTTITVAPF 60 (95)
T ss_dssp CBEEEECTTSHHHHTT-CCTTCEEEEETTEECS--SHHHHHHHHHHTTTCSEEEEEEECT
T ss_pred CEEEeeCCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHHhcCCCcEEEEEEEC
Confidence 4789999999999999 9999999999999998 4578888887755557999999987
No 442
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.00 E-value=9.5e-06 Score=75.89 Aligned_cols=59 Identities=19% Similarity=0.200 Sum_probs=48.5
Q ss_pred cEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHc--CCCeEEEEEEeCCCc
Q psy6910 1059 ALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRN--GDSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1059 ~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~--~~~~v~L~v~R~~~~ 1120 (1145)
++.|..+.|+++|+++| |++||+|++|||+++. ++.++.++++. .+..+.|+|.|++..
T Consensus 38 G~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v~--~~~d~~~~~~~~~~g~~v~l~v~R~g~~ 98 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLT--DPNVMNTLFQSMNEMTEMSLTVERDGQQ 98 (105)
T ss_dssp EEEEEECSCTHHHHHHT-CCTTCEEEEETTEETT--STTHHHHHHHHHTTCSEEEEEEEETTEE
T ss_pred EEEEecCCCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCeEEEEEEECCEE
Confidence 56677777888889999 9999999999999998 55677777764 457899999998753
No 443
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=98.00 E-value=2.3e-06 Score=92.62 Aligned_cols=36 Identities=28% Similarity=0.568 Sum_probs=34.1
Q ss_pred CCCCCCceeeeCCCCceEEEeCCCceeeCcCCcccc
Q psy6910 340 DELPYGWERIDDPAYGTYYIDHVNKQTQYENPVLQA 375 (1145)
Q Consensus 340 ~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~~ 375 (1145)
.+||+|||++.+++|++|||||.|++|||+||++..
T Consensus 10 ~~l~~~we~~~~~~~~~y~~~h~~~tt~w~~p~~~~ 45 (261)
T 1eg3_A 10 TSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTE 45 (261)
T ss_dssp TTCCTTEEEEECTTSCEEEEETTTTEEESSCHHHHH
T ss_pred CCCCCCcceeECCCCCeEeecCCcccccCCCCchhh
Confidence 589999999999999999999999999999999864
No 444
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=97.98 E-value=1.3e-05 Score=93.24 Aligned_cols=75 Identities=24% Similarity=0.416 Sum_probs=64.8
Q ss_pred ccceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEEEEEEeC
Q psy6910 445 LRGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQLEVCRG 522 (1145)
Q Consensus 445 ~~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 522 (1145)
..|+|+.+.... ....+++|.+|.+++||+++| |++||+|++|||+.+.+++..+++.+|+. +.|..|+|+|.|.
T Consensus 84 ~~giG~~~~~~~-~~~~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~~-~~g~~v~l~v~r~ 158 (388)
T 1fc6_A 84 VTGVGLEITYDG-GSGKDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQG-EADSQVEVVLHAP 158 (388)
T ss_dssp CBBCSEEEEECT-TCSSCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHCB-STTCEEEEEEEET
T ss_pred eEEEEEEEEEee-cCCCcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhc-CCCCEEEEEEEeC
Confidence 358999887531 113469999999999999999 99999999999999999999999999987 4689999999986
No 445
>1ywi_A Formin-binding protein 3; WW domain, class II, proline-rich peptides, protein-protein interactions, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1ywj_A 1zr7_A 2dyf_A
Probab=97.97 E-value=4.4e-06 Score=63.44 Aligned_cols=34 Identities=21% Similarity=0.648 Sum_probs=27.5
Q ss_pred CCCCCCCcEEEEccCCceEeeeCCCCceeccCCc
Q psy6910 293 LGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPR 326 (1145)
Q Consensus 293 ~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr 326 (1145)
.+++|.+|++..+++|+.||+|..|+.++|++|.
T Consensus 7 ~~~~~~~W~e~~~~~G~~YYyN~~T~eS~We~P~ 40 (41)
T 1ywi_A 7 VGSAKSMWTEHKSPDGRTYYYNTETKQSTWEKPD 40 (41)
T ss_dssp -----CCEEEEEETTTEEEEEETTTTEEEESCC-
T ss_pred CCCCCCCcEEEECCCCCEEEEECCCCCEEeCCCC
Confidence 4568999999999999999999999999999994
No 446
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=97.96 E-value=1.2e-05 Score=76.13 Aligned_cols=57 Identities=23% Similarity=0.451 Sum_probs=51.6
Q ss_pred CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEEEEEEeC
Q psy6910 460 EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQLEVCRG 522 (1145)
Q Consensus 460 ~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 522 (1145)
..+++|..|.++|||+++| |++||+|++|||..+. +..++..+|+. |+.+.|+|.|+
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~---~~~v~l~v~R~ 90 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQ--NAEDVYEAVRT---QSQLAVQIRRG 90 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHHH---CSSEEEEEEET
T ss_pred CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHhC---CCeEEEEEEEC
Confidence 3579999999999999999 9999999999999998 57888899986 67899999986
No 447
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=97.87 E-value=1.2e-05 Score=72.85 Aligned_cols=57 Identities=30% Similarity=0.466 Sum_probs=50.3
Q ss_pred cEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEEEEEEeC
Q psy6910 462 FLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQLEVCRG 522 (1145)
Q Consensus 462 ~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 522 (1145)
.++|..|.+++||+++| |++||+|++|||..+. +..++..+|+.. .|..+.|+|.|+
T Consensus 5 ~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~~-~g~~v~l~v~R~ 61 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAG-LQAGDRIVXVDGQPLT--QWVTFVMLVRDN-PGXSLALEIERQ 61 (91)
T ss_dssp -CBCSEECTTSHHHHTT-CCTTCEEEEETTEECC--CHHHHHHHHHHC-TTCCEEEEEEET
T ss_pred CeEEEEECCCChHHhcC-CCCCCEEEEECCeEcC--CHHHHHHHHhcC-CCCeEEEEEEEC
Confidence 36789999999999999 9999999999999998 567888888874 588999999886
No 448
>2jx8_A Hpcif1, phosphorylated CTD-interacting factor 1; protein fragment, WW domain, triple-standed beta-sheet, alpha-helix, nucleus, phosphorylation; NMR {Homo sapiens}
Probab=97.86 E-value=3.8e-06 Score=67.18 Aligned_cols=35 Identities=29% Similarity=0.566 Sum_probs=31.5
Q ss_pred CCCCCCceeeeCC-CCceEEEeCCCceeeCcCCccc
Q psy6910 340 DELPYGWERIDDP-AYGTYYIDHVNKQTQYENPVLQ 374 (1145)
Q Consensus 340 ~~LP~gWe~~~~~-~g~~yyinh~~k~t~~~~P~~~ 374 (1145)
..||.||+.+++. .|+.||+|+.|+++||++|+..
T Consensus 9 ~~LP~gW~~~~~~~~gr~YY~N~~T~~SqWe~P~~~ 44 (52)
T 2jx8_A 9 ELVHAGWEKCWSRRENRPYYFNRFTNQSLWEMPVLG 44 (52)
T ss_dssp HHHHHTCCEEEETTTTEEEEEETTTTEEESSCCCCT
T ss_pred CCCCcCcEEEEccccCCEEEEECCCCCEEeCCCCCC
Confidence 3689999999985 8999999999999999999765
No 449
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.82 E-value=1.4e-05 Score=92.73 Aligned_cols=72 Identities=24% Similarity=0.320 Sum_probs=61.3
Q ss_pred ccceeEEEecCCCCC-CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEEEEEEeC
Q psy6910 445 LRGLGFTIVGGDDSK-EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQLEVCRG 522 (1145)
Q Consensus 445 ~~glG~~i~gg~~~~-~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 522 (1145)
..||||++....+.. .-.++|..|.++|||+++| |++||+|++|||..+.++. +..+|+. .|..|+|+|.|.
T Consensus 73 ~~G~~~~l~~~~~~~~~~~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~---~~~~l~~--~g~~v~l~v~R~ 145 (403)
T 3k50_A 73 SYGFDYTLYKVLDNDTAYNALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITKKV---ESELLQG--STRQLQIGVYKE 145 (403)
T ss_dssp BCSEEEEEEECTTCSSCEEEEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCTTT---GGGGTSC--SCEEEEEEEEEE
T ss_pred ccceEEEEEEcCCCCcceeEEEEEeCCCChHHHcC-CCCCCEEEEECCEEccchh---HHHHhhC--CCCEEEEEEEeC
Confidence 668999988765431 2258999999999999999 9999999999999999885 6777887 689999999886
No 450
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=97.81 E-value=4.1e-05 Score=88.95 Aligned_cols=75 Identities=28% Similarity=0.491 Sum_probs=63.0
Q ss_pred cceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcC-CCeEEEEEEeCCC
Q psy6910 1043 RGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNG-DSTVRLLIKRGGS 1119 (1145)
Q Consensus 1043 ~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~-~~~v~L~v~R~~~ 1119 (1145)
.++|+.+..... ...+++|..|.++|||+++| |++||+|++|||+++.+++.++++.+|+.. +.+|.|+|.|++.
T Consensus 85 ~giG~~~~~~~~-~~~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~g~ 160 (388)
T 1fc6_A 85 TGVGLEITYDGG-SGKDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPGA 160 (388)
T ss_dssp BBCSEEEEECTT-CSSCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEETTE
T ss_pred EEEEEEEEEeec-CCCcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeCCC
Confidence 368888764311 13479999999999999999 999999999999999998889999999864 5679999999876
No 451
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=97.79 E-value=6e-05 Score=85.38 Aligned_cols=72 Identities=15% Similarity=0.357 Sum_probs=59.8
Q ss_pred ceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHc--CCCeEEEEEEe-CCCc
Q psy6910 1044 GFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRN--GDSTVRLLIKR-GGSV 1120 (1145)
Q Consensus 1044 ~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~--~~~~v~L~v~R-~~~~ 1120 (1145)
.||+.+..... ..+++|..|.+++||+++| |++||+|++|||+.+. ++.++..+|.. .+.++.|+|.| ++..
T Consensus 230 ~lGi~~~~~~~--~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~~g~~ 304 (324)
T 1y8t_A 230 SLGVQVTNDKD--TLGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPIN--SADALVAAVRSKAPGATVALTFQDPSGGS 304 (324)
T ss_dssp ECCEEEESCSS--SSSEEEEEECTTSTTTTTT-CCTTCEEEEETTEECC--SHHHHHHHHHTSCTTCEEEEEEECSSCCE
T ss_pred ccceEeeeccC--CCceEEEEECCCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECCCCE
Confidence 46777654221 4579999999999999999 9999999999999998 77889888875 46789999999 7653
No 452
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=97.79 E-value=2.7e-05 Score=72.82 Aligned_cols=58 Identities=24% Similarity=0.173 Sum_probs=47.1
Q ss_pred cEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEEEEEEeC
Q psy6910 462 FLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQLEVCRG 522 (1145)
Q Consensus 462 ~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 522 (1145)
++.|..+.|++||++.| |++||+|++|||..+..+. ++..+++....|..+.|+|.|+
T Consensus 38 G~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v~~~~--d~~~~~~~~~~g~~v~l~v~R~ 95 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDPN--VMNTLFQSMNEMTEMSLTVERD 95 (105)
T ss_dssp EEEEEECSCTHHHHHHT-CCTTCEEEEETTEETTSTT--HHHHHHHHHTTCSEEEEEEEET
T ss_pred EEEEecCCCCCHHHHcC-CCCCCEEEEECCEECCCHH--HHHHHHHhcCCCCeEEEEEEEC
Confidence 45677777777779999 9999999999999999764 5566676545688999999986
No 453
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=97.78 E-value=5.9e-05 Score=72.77 Aligned_cols=57 Identities=28% Similarity=0.373 Sum_probs=50.5
Q ss_pred ccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEEEEEEeC
Q psy6910 461 EFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQLEVCRG 522 (1145)
Q Consensus 461 ~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 522 (1145)
.+++|..|.+++||++. |++||+|++|||+.+.. ..++..+|+....|+.|.|+| |+
T Consensus 25 ~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~~--~~dl~~~l~~~~~g~~v~l~V-R~ 81 (125)
T 2hga_A 25 DGVQIDSVVPGSPASKV--LTPGLVIESINGMPTSN--LTTYSAALKTISVGEVINITT-DQ 81 (125)
T ss_dssp CCEEEEEECSSSGGGGT--SCTTCEEEEETTEECSS--HHHHHHHHTTCCTTCEEEEEE-TT
T ss_pred CceEEEEECCCChHHHh--cCCCCEEEEECCEEcCC--HHHHHHHHHhcCCCCEEEEEE-EC
Confidence 46999999999999987 99999999999999984 578888888666789999999 86
No 454
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=97.78 E-value=4.9e-05 Score=85.85 Aligned_cols=60 Identities=27% Similarity=0.500 Sum_probs=54.6
Q ss_pred CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEEEEEEeC
Q psy6910 460 EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQLEVCRG 522 (1145)
Q Consensus 460 ~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 522 (1145)
..+++|.+|.+++||+++| |++||+|++|||+.+.. ..++..+|+....|+.|+|+|.|+
T Consensus 243 ~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~ 302 (318)
T 1te0_A 243 LQGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAIS--ALETMDQVAEIRPGSVIPVVVMRD 302 (318)
T ss_dssp CCCEEEEEECTTSTTTTTC-CCTTCCEEEETTEECCC--HHHHHHHHHTSCTTCEEEEEEESS
T ss_pred CCcEEEEEeCCCChHHHCC-CCCCCEEEEECCEEcCC--HHHHHHHHHhcCCCCEEEEEEEEC
Confidence 3579999999999999999 99999999999999984 578999998866899999999997
No 455
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=97.78 E-value=3.8e-05 Score=72.61 Aligned_cols=57 Identities=28% Similarity=0.500 Sum_probs=50.3
Q ss_pred CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEEEEEEeC
Q psy6910 460 EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQLEVCRG 522 (1145)
Q Consensus 460 ~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 522 (1145)
..+++|..|.+++||++.| |++||+|++|||..+. +..++..+|+ .|..+.|+|.|+
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~---~g~~v~l~v~R~ 90 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLV--DSSELQEAVL---TESPLLLEVRRG 90 (112)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHH---HCSSEEEEEEET
T ss_pred CCCeEEEEECCCChHHHCC-CCCCCEEEEECCEECC--CHHHHHHHHh---CCCeEEEEEEEC
Confidence 3579999999999999999 9999999999999997 4678888885 377999999886
No 456
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=97.78 E-value=4.4e-05 Score=87.13 Aligned_cols=60 Identities=23% Similarity=0.413 Sum_probs=55.3
Q ss_pred CccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEEEEEEeC
Q psy6910 460 EEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQLEVCRG 522 (1145)
Q Consensus 460 ~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 522 (1145)
..+++|.+|.++|||+++| |++||+|++|||+.+. +..++..+|+..+.|+.|+|+|.|+
T Consensus 262 ~~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~ 321 (345)
T 3stj_A 262 QRGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLN--SFAELRSRIATTEPGTKVKLGLLRN 321 (345)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEECEETTEECS--CHHHHHHHHHTSCTTCEEEEEEEET
T ss_pred CceEEEEEeccCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEEC
Confidence 3579999999999999999 9999999999999998 6679999998877899999999997
No 457
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=97.77 E-value=4.8e-05 Score=73.39 Aligned_cols=58 Identities=17% Similarity=0.215 Sum_probs=51.1
Q ss_pred cccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHc--CCCeEEEEEEeCCC
Q psy6910 1057 NMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRN--GDSTVRLLIKRGGS 1119 (1145)
Q Consensus 1057 ~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~--~~~~v~L~v~R~~~ 1119 (1145)
..+++|..|.++++|+++ |++||+|++|||..+. ++.++..+|+. .+..+.|+| |++.
T Consensus 24 ~~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~--~~~dl~~~l~~~~~g~~v~l~V-R~g~ 83 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKV--LTPGLVIESINGMPTS--NLTTYSAALKTISVGEVINITT-DQGT 83 (125)
T ss_dssp CCCEEEEEECSSSGGGGT--SCTTCEEEEETTEECS--SHHHHHHHHTTCCTTCEEEEEE-TTEE
T ss_pred CCceEEEEECCCChHHHh--cCCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCEEEEEE-ECCE
Confidence 457999999999999998 9999999999999998 78899999984 456799999 8775
No 458
>3tc5_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; PIN1 mutant (R14A), oncogenic transformation, small molecule cycle, rotamase, phosphoprotein; HET: 3T5 P6G; 1.40A {Homo sapiens} PDB: 2itk_A* 2q5a_A* 2xp3_A* 2xp4_A* 2xp5_A* 2xp7_A* 2xp8_A* 2xp9_A* 2xpa_A* 2xpb_A* 3kab_A* 3kag_A* 3kah_A* 3kai_A* 3kce_A* 3ntp_A* 3odk_A* 3oob_A* 2zr6_A* 1f8a_B* ...
Probab=97.77 E-value=1.3e-05 Score=81.28 Aligned_cols=35 Identities=31% Similarity=0.731 Sum_probs=29.1
Q ss_pred CCCCCCceeeeC-CCCceEEEeCCCceeeCcCCccc
Q psy6910 340 DELPYGWERIDD-PAYGTYYIDHVNKQTQYENPVLQ 374 (1145)
Q Consensus 340 ~~LP~gWe~~~~-~~g~~yyinh~~k~t~~~~P~~~ 374 (1145)
.+||+|||.+.+ ..|++||+||.|+.|||++|+..
T Consensus 8 ~~LP~gWe~~~~~~~g~~yy~n~~t~~t~We~P~~~ 43 (166)
T 3tc5_A 8 EKLPPGWEKAMSRSSGRVYYFNHITNASQWERPSGN 43 (166)
T ss_dssp --CCTTEEEEECTTTCCEEEEETTTCCEESSCC---
T ss_pred CCCCCCceEEEcCCCCCEEEEECCCCCEEecCCCCC
Confidence 579999999999 59999999999999999999754
No 459
>1e0l_A Formin binding protein; SH3 domain, WW domain, FBP28, signal transduction; NMR {Mus musculus} SCOP: b.72.1.1 PDB: 2jup_W 2rly_W 2rm0_W 2nnt_A
Probab=97.75 E-value=2.2e-05 Score=58.26 Aligned_cols=31 Identities=23% Similarity=0.640 Sum_probs=28.6
Q ss_pred CCCCcEEEEccCCceEeeeCCCCceeccCCc
Q psy6910 296 LPPRWEKAYTEKGEVYFIDHNSSTSSWLDPR 326 (1145)
Q Consensus 296 LP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr 326 (1145)
...+|+++.+++|+.||+|..|+.++|++|.
T Consensus 4 ~~~~W~e~~~~~G~~YYyN~~T~es~We~P~ 34 (37)
T 1e0l_A 4 AVSEWTEYKTADGKTYYYNNRTLESTWEKPQ 34 (37)
T ss_dssp SSCSCEEEECTTSCEEEEETTTTEEESSCCS
T ss_pred CCCCeEEEECCCCCEEEEECCCCCEEecCCC
Confidence 4567999999999999999999999999995
No 460
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=97.75 E-value=3.4e-05 Score=88.02 Aligned_cols=61 Identities=28% Similarity=0.363 Sum_probs=55.3
Q ss_pred cccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHc--CCCeEEEEEEeCCCc
Q psy6910 1057 NMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRN--GDSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1057 ~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~--~~~~v~L~v~R~~~~ 1120 (1145)
..+++|..|.++|||+++| |++||+|++|||+.+. ++.++..+|+. .+.++.|+|.|+++.
T Consensus 262 ~~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~~ 324 (345)
T 3stj_A 262 QRGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLN--SFAELRSRIATTEPGTKVKLGLLRNGKP 324 (345)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEECEETTEECS--CHHHHHHHHHTSCTTCEEEEEEEETTEE
T ss_pred CceEEEEEeccCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 4589999999999999999 9999999999999998 78999999986 467899999998864
No 461
>3olm_A E3 ubiquitin-protein ligase RSP5; ligase; 2.50A {Saccharomyces cerevisiae}
Probab=97.72 E-value=1.1e-05 Score=94.12 Aligned_cols=37 Identities=32% Similarity=0.616 Sum_probs=34.5
Q ss_pred CCCCCCCceeeeCCCCceEEEeCCCceeeCcCCcccc
Q psy6910 339 DDELPYGWERIDDPAYGTYYIDHVNKQTQYENPVLQA 375 (1145)
Q Consensus 339 ~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~~~~ 375 (1145)
.++||+|||.+.+++|++|||||+|++|+|+|||++.
T Consensus 6 ~~~lP~gWe~~~~~~g~~y~i~h~~~~t~w~~Pr~~~ 42 (429)
T 3olm_A 6 LGPLPSGWEMRLTNTARVYFVDHNTKTTTWDDPRLPS 42 (429)
T ss_dssp CCCCCTTCCCCCSSCCCCCEEETTTTEEESSCTTSCC
T ss_pred CCCCCCCceeEECCCCCeEEEeCCCcceeccCCCCCc
Confidence 4689999999999999999999999999999999864
No 462
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=97.71 E-value=8.5e-05 Score=84.15 Aligned_cols=71 Identities=28% Similarity=0.387 Sum_probs=59.8
Q ss_pred cceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEEEEEEe
Q psy6910 446 RGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQLEVCR 521 (1145)
Q Consensus 446 ~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~l~v~R 521 (1145)
..||+.+..-. . ..+++|..|.+++||++.| |++||+|++|||+.+.+ ..++..+|+..+.|+.|+|+|.|
T Consensus 229 ~~lGi~~~~~~-~-~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~l~~~l~~~~~g~~v~l~v~R 299 (324)
T 1y8t_A 229 ASLGVQVTNDK-D-TLGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPINS--ADALVAAVRSKAPGATVALTFQD 299 (324)
T ss_dssp EECCEEEESCS-S-SSSEEEEEECTTSTTTTTT-CCTTCEEEEETTEECCS--HHHHHHHHHTSCTTCEEEEEEEC
T ss_pred cccceEeeecc-C-CCceEEEEECCCChHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHhcCCCCEEEEEEEE
Confidence 36888776421 1 3579999999999999999 99999999999999984 56888888876679999999998
No 463
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=97.70 E-value=5.3e-05 Score=85.61 Aligned_cols=61 Identities=20% Similarity=0.385 Sum_probs=54.7
Q ss_pred cccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHc--CCCeEEEEEEeCCCc
Q psy6910 1057 NMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRN--GDSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1057 ~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~--~~~~v~L~v~R~~~~ 1120 (1145)
..+++|..|.++|||+++| |++||+|++|||+.+. ++.++..+|+. .+.++.|+|.|++..
T Consensus 243 ~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~~ 305 (318)
T 1te0_A 243 LQGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAI--SALETMDQVAEIRPGSVIPVVVMRDDKQ 305 (318)
T ss_dssp CCCEEEEEECTTSTTTTTC-CCTTCCEEEETTEECC--CHHHHHHHHHTSCTTCEEEEEEESSSCE
T ss_pred CCcEEEEEeCCCChHHHCC-CCCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 3579999999999999999 9999999999999998 67899999986 457899999998764
No 464
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.69 E-value=3.5e-05 Score=94.06 Aligned_cols=69 Identities=19% Similarity=0.324 Sum_probs=58.9
Q ss_pred cceeEEEecCCCCCCccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEEEEEEeC
Q psy6910 446 RGLGFTIVGGDDSKEEFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQLEVCRG 522 (1145)
Q Consensus 446 ~glG~~i~gg~~~~~~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 522 (1145)
.+||+.+.... .+++|.+|.++|||+++| |++||+|++|||..+. ..+..++|+..+.|+.|+|+|.|+
T Consensus 485 ~~lG~~~~~~~----~gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v~---~~~l~~~l~~~~~g~~v~l~v~R~ 553 (597)
T 4fgm_A 485 VNFGAKYKASP----QGLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQAT---EQSVKRILERYIPGDTVTIHAFRR 553 (597)
T ss_dssp CCCSEEEEEET----TEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC---TTTHHHHHTTCCTTCEEEEEEEET
T ss_pred cccceEEeccC----CeEEEEEeCCCChHHHCC-CCCCCEEEEECCEECC---HHHHHHHHHhcCCCCEEEEEEEEC
Confidence 47999886542 359999999999999999 9999999999999994 356677777766799999999997
No 465
>1e0n_A Hypothetical protein; YJQ8WW domain, WW domain, saccharomyces cerevisae, YJQ8 protein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1
Probab=97.64 E-value=3.6e-05 Score=52.57 Aligned_cols=27 Identities=26% Similarity=0.566 Sum_probs=23.6
Q ss_pred CCcEEEEccCCceEeeeCCCCceeccCC
Q psy6910 298 PRWEKAYTEKGEVYFIDHNSSTSSWLDP 325 (1145)
Q Consensus 298 ~gWe~~~~~~Gr~yyidh~t~tT~W~~P 325 (1145)
+||| ....+|+.||+|+.|+.|+|+.|
T Consensus 1 ~gWe-~~~~~g~~YYyN~~T~~s~We~P 27 (27)
T 1e0n_A 1 PGWE-IIHENGRPLYYNAEQKTKLHYPP 27 (27)
T ss_dssp CCEE-EEESSSSEEEEETTTTEEESSCC
T ss_pred CCCe-EECCCCCeEEEECCCCCEeccCC
Confidence 5799 44467999999999999999987
No 466
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.64 E-value=6.2e-05 Score=85.24 Aligned_cols=60 Identities=23% Similarity=0.422 Sum_probs=54.5
Q ss_pred cccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEEEEEEeCCCc
Q psy6910 1057 NMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1057 ~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~L~v~R~~~~ 1120 (1145)
..+++|..|.++|||+++| |++||+|++|||+.+. +++++.++|+. +.++.|+|.|++..
T Consensus 255 ~~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~--~~~~l~~~l~~-~~~v~l~v~R~g~~ 314 (325)
T 1lcy_A 255 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQ--NAEDVYEAVRT-QSQLAVQIRRGRET 314 (325)
T ss_dssp SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHTT-CSSEEEEEEETTEE
T ss_pred CCCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEcC--CHHHHHHHHhC-CCeEEEEEEECCEE
Confidence 3589999999999999999 9999999999999998 78999999987 57899999998864
No 467
>2ysi_A Transcription elongation regulator 1; Ca150, FBP28, WW domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.22.1.1
Probab=97.61 E-value=7.3e-05 Score=56.37 Aligned_cols=34 Identities=15% Similarity=0.333 Sum_probs=31.4
Q ss_pred CCCCCCCceeeeCCCCceEEEeCCCceeeCcCCc
Q psy6910 339 DDELPYGWERIDDPAYGTYYIDHVNKQTQYENPV 372 (1145)
Q Consensus 339 ~~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~ 372 (1145)
..++|.+|.+..+++|+.||+|..|++++|+.|.
T Consensus 5 ~~~~~~~W~e~~~~~G~~YYyN~~T~eS~We~P~ 38 (40)
T 2ysi_A 5 SSGTEEIWVENKTPDGKVYYYNARTRESAWTKPD 38 (40)
T ss_dssp CCCCCCSEEEEECTTSCEEEEETTTCCEESSCCS
T ss_pred cCCCCCCCEEEECCCCCEEEEECCCCCEEeCCCC
Confidence 4578899999999999999999999999999995
No 468
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.60 E-value=4.4e-05 Score=88.52 Aligned_cols=73 Identities=15% Similarity=0.253 Sum_probs=57.2
Q ss_pred cceeEEEEccCCc-ccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Q psy6910 1043 RGFGFSIRGGREF-QNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVRLLIKRGGS 1119 (1145)
Q Consensus 1043 ~~lG~sl~gg~~~-~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~L~v~R~~~ 1119 (1145)
.++||++....+. ....++|..|.++|||+++| |++||+|++|||+++.+++ +.++|+..+.+|.|++.|++.
T Consensus 74 ~G~~~~l~~~~~~~~~~~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~---~~~~l~~~g~~v~l~v~R~g~ 147 (403)
T 3k50_A 74 YGFDYTLYKVLDNDTAYNALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITKKV---ESELLQGSTRQLQIGVYKEVV 147 (403)
T ss_dssp CSEEEEEEECTTCSSCEEEEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCTTT---GGGGTSCSCEEEEEEEEEEEC
T ss_pred cceEEEEEEcCCCCcceeEEEEEeCCCChHHHcC-CCCCCEEEEECCEEccchh---HHHHhhCCCCEEEEEEEeCCc
Confidence 4677777654321 01247899999999999999 9999999999999999775 566777755679999998764
No 469
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.52 E-value=9.7e-05 Score=90.11 Aligned_cols=70 Identities=23% Similarity=0.351 Sum_probs=56.6
Q ss_pred cceeEEEEccCCcccccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHc--CCCeEEEEEEeCCCc
Q psy6910 1043 RGFGFSIRGGREFQNMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRN--GDSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1043 ~~lG~sl~gg~~~~~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~--~~~~v~L~v~R~~~~ 1120 (1145)
..+|+.+... ..+++|..|.++|||+++| |++||+|++|||..|.. .++.++|+. .+.+|.|+|.|++..
T Consensus 485 ~~lG~~~~~~----~~gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v~~---~~l~~~l~~~~~g~~v~l~v~R~g~~ 556 (597)
T 4fgm_A 485 VNFGAKYKAS----PQGLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQATE---QSVKRILERYIPGDTVTIHAFRRDEL 556 (597)
T ss_dssp CCCSEEEEEE----TTEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCT---TTHHHHHTTCCTTCEEEEEEEETTEE
T ss_pred cccceEEecc----CCeEEEEEeCCCChHHHCC-CCCCCEEEEECCEECCH---HHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 3688887643 3479999999999999999 99999999999999953 455555654 467899999998864
No 470
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.46 E-value=0.00014 Score=83.12 Aligned_cols=59 Identities=32% Similarity=0.518 Sum_probs=54.0
Q ss_pred ccEEEEEeccCCcccccCCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEEEEEEeC
Q psy6910 461 EFLQIKSVVPNGPAALEGHLQT-----------GDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQLEVCRG 522 (1145)
Q Consensus 461 ~~i~V~~v~~~g~A~~~g~l~~-----------GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 522 (1145)
.+++|..|.++|||+++| |++ ||+|++|||+.+.++ .++..+|.....|+.|+|+|.|+
T Consensus 251 ~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~R~ 320 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVSNG--SDLYRILDQCKVGDEVTVEVLRG 320 (348)
T ss_dssp SSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCSSS--HHHHHHHTTCCTTCEEEEEEECS
T ss_pred ceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeCCH--HHHHHHHHhCCCcCEEEEEEEEC
Confidence 479999999999999999 998 999999999999865 68899998777899999999997
No 471
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.36 E-value=0.00013 Score=83.34 Aligned_cols=60 Identities=27% Similarity=0.457 Sum_probs=53.6
Q ss_pred ccEEEEEEcCCChhcccCCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHHc--CCCeEEEEEEeCCCc
Q psy6910 1058 MALFVLQIAENGPAALDGHLKV-----------GDEIVEINGINTKNMTHAEAIEIIRN--GDSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1058 ~~v~V~~V~~gg~A~~~G~L~~-----------GD~Il~ING~~v~~~s~~eav~~lk~--~~~~v~L~v~R~~~~ 1120 (1145)
.+++|..|.++|||+++| |++ ||+|++|||+.+. +++++..+|.. .++++.|+|.|+++.
T Consensus 251 ~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~R~g~~ 323 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVS--NGSDLYRILDQCKVGDEVTVEVLRGDHK 323 (348)
T ss_dssp SSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCS--SSHHHHHHHTTCCTTCEEEEEEECSSSE
T ss_pred ceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeC--CHHHHHHHHHhCCCcCEEEEEEEECCEE
Confidence 479999999999999999 999 9999999999998 66899999965 357899999998864
No 472
>1ywi_A Formin-binding protein 3; WW domain, class II, proline-rich peptides, protein-protein interactions, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1ywj_A 1zr7_A 2dyf_A
Probab=97.33 E-value=0.00012 Score=55.49 Aligned_cols=33 Identities=27% Similarity=0.478 Sum_probs=27.4
Q ss_pred CCCCCCceeeeCCCCceEEEeCCCceeeCcCCc
Q psy6910 340 DELPYGWERIDDPAYGTYYIDHVNKQTQYENPV 372 (1145)
Q Consensus 340 ~~LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~ 372 (1145)
..+|.+|++..+++|+.||+|..|++++|+.|.
T Consensus 8 ~~~~~~W~e~~~~~G~~YYyN~~T~eS~We~P~ 40 (41)
T 1ywi_A 8 GSAKSMWTEHKSPDGRTYYYNTETKQSTWEKPD 40 (41)
T ss_dssp ----CCEEEEEETTTEEEEEETTTTEEEESCC-
T ss_pred CCCCCCcEEEECCCCCEEEEECCCCCEEeCCCC
Confidence 467889999999999999999999999999994
No 473
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=97.30 E-value=1.3e-05 Score=90.06 Aligned_cols=127 Identities=9% Similarity=-0.109 Sum_probs=80.7
Q ss_pred CCcEEEEEecCCccCcccchhccccCCCCchHHHHhhhhcc--------CcceeecccccCCCCCCCcCCccEEEeCHHH
Q psy6910 99 GKTLTLRTVSSAYVTTDLRQFLNTRFPKGSVDHDLQNIIRD--------NLYLRTVPVTTRTPRDGELNGVDYTFLSIEE 170 (1145)
Q Consensus 99 ~~~v~~~~~p~~~~~~~~~~~~~l~f~k~~i~~~l~~~~~~--------~~~~~~v~~TTR~~r~~E~~g~~Y~fvs~~~ 170 (1145)
.+.+.+.++|.+.+ |++|...|.+.+.- .+|. -+.++|++|+..|.+|+.|||++..+
T Consensus 39 ~~~lIvI~GPTgsG-------------KTtLa~~LA~~l~~eiIs~Ds~qvYr-~mdIgTakp~~eE~~gvphhlidi~~ 104 (339)
T 3a8t_A 39 KEKLLVLMGATGTG-------------KSRLSIDLAAHFPLEVINSDKMQVYK-GLDITTNKISVPDRGGVPHHLLGEVD 104 (339)
T ss_dssp CCEEEEEECSTTSS-------------HHHHHHHHHTTSCEEEEECCSSTTBS-SCTTTTTCCCSGGGTTCCEESSSCBC
T ss_pred CCceEEEECCCCCC-------------HHHHHHHHHHHCCCcEEccccccccc-ceeeecCCCCHHHHcCCCEeeccccC
Confidence 45788999998886 77788777776531 3454 89999999999999999999999777
Q ss_pred H-HHHHHcCCEEEEEEeCCcccCCCccchhhhhcCCCCceeeec-------------------CCCChhhhh---hhhcc
Q psy6910 171 F-KQLEKSGCLLESGLYEGNHYGTPKPVKEPYVSLPQNVNLLPG-------------------AHPSSEGKR---KRNRS 227 (1145)
Q Consensus 171 f-~~~~~~~~flE~~~~~g~~YGt~~~~i~~~~~~g~~~~~il~-------------------~~~~~~~~~---~~~~~ 227 (1145)
| .+....+.|.++. .+.|+++.+.|+ .+|+- +|++ ++. .+...
T Consensus 105 ~~~e~~s~~~F~~~a----------~~~i~~i~~~g~--~pIlvGGtglYi~all~g~~~p~~~d~~--~a~~~~~~~~~ 170 (339)
T 3a8t_A 105 PARGELTPADFRSLA----------GKAVSEITGRRK--LPVLVGGSNSFIHALLVDRFDSSGPGVF--EEGSHSVVSSE 170 (339)
T ss_dssp GGGCCCCHHHHHHHH----------HHHHHHHHHTTC--EEEEECCCHHHHHHHHBSSCCTTCC---------------C
T ss_pred cccCccCHHHHHHHH----------HHHHHHHHhcCC--eEEEEcCHHHHHHHHHhCCCCCcccChh--hhcccCccccc
Confidence 7 5554555555443 344445555544 33331 2221 111 11111
Q ss_pred cccccceeEecCCChhhhhhhhhccCC
Q psy6910 228 NVEAMASKSIEPDMKTNGFDNKTVNMG 254 (1145)
Q Consensus 228 ~~~~~~~ifi~pps~~~l~~rl~~rg~ 254 (1145)
.+... .+|..+|+.++|.+|+..|.+
T Consensus 171 ~~~~~-~~i~L~~~re~L~~RI~~R~~ 196 (339)
T 3a8t_A 171 LRYDC-CFLWVDVSVKVLTDYLAKRVD 196 (339)
T ss_dssp BSSEE-EEEEEECCHHHHHHHHHHHHH
T ss_pred cccCe-EEEEEeCCHHHHHHHHHhhcc
Confidence 22233 556667789999999998853
No 474
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.22 E-value=4.8e-05 Score=86.47 Aligned_cols=60 Identities=25% Similarity=0.539 Sum_probs=0.0
Q ss_pred cccEEEEEEcCCChhcccCCCCCCCEEEEECCEEcCCCCHHHHHHHHHcCCCeEEEEEEeCCCc
Q psy6910 1057 NMALFVLQIAENGPAALDGHLKVGDEIVEINGINTKNMTHAEAIEIIRNGDSTVRLLIKRGGSV 1120 (1145)
Q Consensus 1057 ~~~v~V~~V~~gg~A~~~G~L~~GD~Il~ING~~v~~~s~~eav~~lk~~~~~v~L~v~R~~~~ 1120 (1145)
..+++|..|.++|||+++| |++||+|++|||+.+. ++.++..+|+. +.++.|+|.|++..
T Consensus 253 ~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~-~~~v~l~v~R~g~~ 312 (332)
T 3num_A 253 ISGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVV--SANDVSDVIKR-ESTLNMVVRRGNED 312 (332)
T ss_dssp ----------------------------------------------------------------
T ss_pred CCceEEEEeccCCChHHcC-CCCCCEEEEECCEECC--CHHHHHHHHhC-CCeEEEEEEECCEE
Confidence 3578999999999999999 9999999999999997 67888888876 67799999998764
No 475
>1e0l_A Formin binding protein; SH3 domain, WW domain, FBP28, signal transduction; NMR {Mus musculus} SCOP: b.72.1.1 PDB: 2jup_W 2rly_W 2rm0_W 2nnt_A
Probab=97.21 E-value=0.00035 Score=51.73 Aligned_cols=31 Identities=19% Similarity=0.415 Sum_probs=28.6
Q ss_pred CCCCceeeeCCCCceEEEeCCCceeeCcCCc
Q psy6910 342 LPYGWERIDDPAYGTYYIDHVNKQTQYENPV 372 (1145)
Q Consensus 342 LP~gWe~~~~~~g~~yyinh~~k~t~~~~P~ 372 (1145)
...+|.+..+++|+.||+|..|++++|+.|.
T Consensus 4 ~~~~W~e~~~~~G~~YYyN~~T~es~We~P~ 34 (37)
T 1e0l_A 4 AVSEWTEYKTADGKTYYYNNRTLESTWEKPQ 34 (37)
T ss_dssp SSCSCEEEECTTSCEEEEETTTTEEESSCCS
T ss_pred CCCCeEEEECCCCCEEEEECCCCCEEecCCC
Confidence 4568999999999999999999999999995
No 476
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.19 E-value=0.00047 Score=78.00 Aligned_cols=56 Identities=23% Similarity=0.449 Sum_probs=51.1
Q ss_pred ccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEEEEEEeC
Q psy6910 461 EFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQLEVCRG 522 (1145)
Q Consensus 461 ~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 522 (1145)
.+++|.+|.+++||++.| |++||+|++|||+.+. +..++.++|+. ++.|.|+|.|+
T Consensus 256 ~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~--~~~~l~~~l~~---~~~v~l~v~R~ 311 (325)
T 1lcy_A 256 HGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQ--NAEDVYEAVRT---QSQLAVQIRRG 311 (325)
T ss_dssp SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHTT---CSSEEEEEEET
T ss_pred CCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEcC--CHHHHHHHHhC---CCeEEEEEEEC
Confidence 579999999999999999 9999999999999997 56788888886 57999999997
No 477
>1e0n_A Hypothetical protein; YJQ8WW domain, WW domain, saccharomyces cerevisae, YJQ8 protein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1
Probab=97.15 E-value=0.00032 Score=47.86 Aligned_cols=27 Identities=26% Similarity=0.335 Sum_probs=24.3
Q ss_pred CCceeeeCCCCceEEEeCCCceeeCcCC
Q psy6910 344 YGWERIDDPAYGTYYIDHVNKQTQYENP 371 (1145)
Q Consensus 344 ~gWe~~~~~~g~~yyinh~~k~t~~~~P 371 (1145)
+||| .....|+.||+|..|++++|+.|
T Consensus 1 ~gWe-~~~~~g~~YYyN~~T~~s~We~P 27 (27)
T 1e0n_A 1 PGWE-IIHENGRPLYYNAEQKTKLHYPP 27 (27)
T ss_dssp CCEE-EEESSSSEEEEETTTTEEESSCC
T ss_pred CCCe-EECCCCCeEEEECCCCCEeccCC
Confidence 4899 66679999999999999999987
No 478
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=96.84 E-value=8.5e-05 Score=82.60 Aligned_cols=137 Identities=11% Similarity=0.018 Sum_probs=88.5
Q ss_pred ecCCCHHHHHHHHHhhc---------CCCCcEEEEEecCCccCcccchhccccCCCCchHHHHhhhhccCcceeeccc-c
Q psy6910 80 VAGYTRRDTIAWLNHCC---------RSGKTLTLRTVSSAYVTTDLRQFLNTRFPKGSVDHDLQNIIRDNLYLRTVPV-T 149 (1145)
Q Consensus 80 v~g~~~~~~~~~l~~~~---------~~~~~v~~~~~p~~~~~~~~~~~~~l~f~k~~i~~~l~~~~~~~~~~~~v~~-T 149 (1145)
+..+|.+|+..++++.+ .+.+.+.+.++|+|++ |+|+.+.|.+.++ ..+. .|+. +
T Consensus 4 ~~~~s~~~~~~~~~~~~~~~l~~~~~~~~~~livl~G~sGsG-------------KSTla~~L~~~~~-~~~~-~Is~D~ 68 (287)
T 1gvn_B 4 IVNFTDKQFENRLNDNLEELIQGKKAVESPTAFLLGGQPGSG-------------KTSLRSAIFEETQ-GNVI-VIDNDT 68 (287)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHTTCCCCSSCEEEEEECCTTSC-------------THHHHHHHHHHTT-TCCE-EECTHH
T ss_pred ccCCCHHHHHHHHHHHHHHHhccccCCCCCeEEEEECCCCCC-------------HHHHHHHHHHHhC-CCeE-EEechH
Confidence 34567777777664321 2356788888999987 8999999988753 3333 4555 7
Q ss_pred cCCCCCCCcCCccEEEeCHHHHHHHHHcCCEEEEE-EeCCcccCCC-ccchhhhhcCCCCceeeecCCCChhh-hhhh--
Q psy6910 150 TRTPRDGELNGVDYTFLSIEEFKQLEKSGCLLESG-LYEGNHYGTP-KPVKEPYVSLPQNVNLLPGAHPSSEG-KRKR-- 224 (1145)
Q Consensus 150 TR~~r~~E~~g~~Y~fvs~~~f~~~~~~~~flE~~-~~~g~~YGt~-~~~i~~~~~~g~~~~~il~~~~~~~~-~~~~-- 224 (1145)
+|.++++ |..+++. |.+|. ++.+++||+. ...++..+++|+ .+|+|++++... ...+
T Consensus 69 ~R~~~~~--------------~~~~~~~--~~~~a~~~~~~~~~~~~~~~v~~~l~~g~--~vIld~~~~~~~~~~~~~~ 130 (287)
T 1gvn_B 69 FKQQHPN--------------FDELVKL--YEKDVVKHVTPYSNRMTEAIISRLSDQGY--NLVIEGTGRTTDVPIQTAT 130 (287)
T ss_dssp HHTTSTT--------------HHHHHHH--HGGGCHHHHHHHHHHHHHHHHHHHHHHTC--CEEECCCCCCSHHHHHHHH
T ss_pred hHHhchh--------------hHHHHHH--ccchhhhhhhHHHHHHHHHHHHHHHhcCC--eEEEECCCCCHHHHHHHHH
Confidence 8877665 4444432 55554 5568999994 567788888866 999999886533 1122
Q ss_pred --hcc-cccccceeEecCCChhhh--hhhhh
Q psy6910 225 --NRS-NVEAMASKSIEPDMKTNG--FDNKT 250 (1145)
Q Consensus 225 --~~~-~~~~~~~ifi~pps~~~l--~~rl~ 250 (1145)
++. ++..+ ++|+.||+..++ .+|+.
T Consensus 131 ~~~~~g~~~~~-i~~~~p~~~~~l~~~~Rl~ 160 (287)
T 1gvn_B 131 MLQAKGYETKM-YVMAVPKINSYLGTIERYE 160 (287)
T ss_dssp HHHTTTCEEEE-EEECCCHHHHHHHHHHHHH
T ss_pred HHHhCCCcEEE-EEEECCHHHHHHHHHHHHH
Confidence 222 22234 667788876655 77764
No 479
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=96.82 E-value=2.4e-05 Score=86.77 Aligned_cols=90 Identities=13% Similarity=0.101 Sum_probs=71.1
Q ss_pred CCCcEEEEEecCCccCcccchhccccCCCCchHHHHhhhhcc--------CcceeecccccCCCCCCCcCCccEEEeCHH
Q psy6910 98 SGKTLTLRTVSSAYVTTDLRQFLNTRFPKGSVDHDLQNIIRD--------NLYLRTVPVTTRTPRDGELNGVDYTFLSIE 169 (1145)
Q Consensus 98 ~~~~v~~~~~p~~~~~~~~~~~~~l~f~k~~i~~~l~~~~~~--------~~~~~~v~~TTR~~r~~E~~g~~Y~fvs~~ 169 (1145)
|+..+.+.++|++++ |++|...|.+.+.. .+| +.++++|++|+++|.+|+.|||++..
T Consensus 1 m~~~~i~i~GptgsG-------------Kt~la~~La~~~~~~iis~Ds~QvY-r~~~igTakp~~~E~~gvphhlid~~ 66 (322)
T 3exa_A 1 MKEKLVAIVGPTAVG-------------KTKTSVMLAKRLNGEVISGDSMQVY-RGMDIGTAKITAEEMDGVPHHLIDIK 66 (322)
T ss_dssp -CCEEEEEECCTTSC-------------HHHHHHHHHHTTTEEEEECCGGGGB-TTCCTTTTCCCHHHHTTCCEESSSCB
T ss_pred CCCcEEEEECCCcCC-------------HHHHHHHHHHhCccceeecCcccce-eeeeecCCCCCHHHHcCCCEEEeccC
Confidence 356788889999886 77888777776532 235 48999999999999999999999999
Q ss_pred HHHHHHHcCCEEEEEEeCCcccCCCccchhhhhcCCCCceeeec
Q psy6910 170 EFKQLEKSGCLLESGLYEGNHYGTPKPVKEPYVSLPQNVNLLPG 213 (1145)
Q Consensus 170 ~f~~~~~~~~flE~~~~~g~~YGt~~~~i~~~~~~g~~~~~il~ 213 (1145)
+|.+.+..+ .+|...+..|+.+.+.|+ ++|+-
T Consensus 67 ~~~e~~s~~----------~F~~~a~~~i~~i~~~gk--~pIlV 98 (322)
T 3exa_A 67 DPSESFSVA----------DFQDLATPLITEIHERGR--LPFLV 98 (322)
T ss_dssp CTTSCCCHH----------HHHHHHHHHHHHHHHTTC--EEEEE
T ss_pred ChhhhccHH----------HHHHHHHHHHHHHHhCCC--cEEEE
Confidence 998766554 455556899999999988 77663
No 480
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.71 E-value=0.0019 Score=84.74 Aligned_cols=70 Identities=9% Similarity=0.142 Sum_probs=60.7
Q ss_pred ccceeEEEecCCCCCCccEEEEEeccC--------CcccccC-CCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeE
Q psy6910 445 LRGLGFTIVGGDDSKEEFLQIKSVVPN--------GPAALEG-HLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETV 515 (1145)
Q Consensus 445 ~~glG~~i~gg~~~~~~~i~V~~v~~~--------g~A~~~g-~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v 515 (1145)
..|+|+.+.-- +..++|.+|.++ +||++.| .|+ ||+|++|||+.+.++. ++..+|+. +.|..|
T Consensus 736 ~~g~G~~~~~~----~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~-~~g~~v 807 (1045)
T 1k32_A 736 SGRIACDFKLD----GDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSE-KAGTSA 807 (1045)
T ss_dssp CCBCSEEEEEE----TTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHT-TTTSEE
T ss_pred cceecEEEEEe----CCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcC-CCCCEE
Confidence 45899888653 246999999998 9999999 499 9999999999999887 88899998 569999
Q ss_pred EEEEEeC
Q psy6910 516 QLEVCRG 522 (1145)
Q Consensus 516 ~l~v~R~ 522 (1145)
+|+|.|.
T Consensus 808 ~l~v~r~ 814 (1045)
T 1k32_A 808 RIRLSGK 814 (1045)
T ss_dssp EEEEECS
T ss_pred EEEEECC
Confidence 9999985
No 481
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=96.69 E-value=6.9e-05 Score=86.07 Aligned_cols=86 Identities=10% Similarity=0.088 Sum_probs=71.5
Q ss_pred cEEEEEecCCccCcccchhccccCCCCchHHHHhhhhcc--------CcceeecccccCCCCCCCcCCccEEEeCHHHHH
Q psy6910 101 TLTLRTVSSAYVTTDLRQFLNTRFPKGSVDHDLQNIIRD--------NLYLRTVPVTTRTPRDGELNGVDYTFLSIEEFK 172 (1145)
Q Consensus 101 ~v~~~~~p~~~~~~~~~~~~~l~f~k~~i~~~l~~~~~~--------~~~~~~v~~TTR~~r~~E~~g~~Y~fvs~~~f~ 172 (1145)
.+.+.++|++++ |++|...|.+.+.. .+| ..+++||++|+.+|.+|+.|||++..+|.
T Consensus 3 ~~i~i~GptgsG-------------Kttla~~La~~~~~~iis~Ds~QvY-r~l~i~T~kp~~~E~~gv~hhlid~~~~~ 68 (409)
T 3eph_A 3 KVIVIAGTTGVG-------------KSQLSIQLAQKFNGEVINSDSMQVY-KDIPIITNKHPLQEREGIPHHVMNHVDWS 68 (409)
T ss_dssp EEEEEEECSSSS-------------HHHHHHHHHHHHTEEEEECCTTTTB-SSCTTTTTCCCGGGTTTCCEESCSCBCTT
T ss_pred cEEEEECcchhh-------------HHHHHHHHHHHCCCeEeecCcccee-cccccccCCCCHHHHcCchhhcCCccChH
Confidence 467778898885 77777777766421 134 47999999999999999999999999999
Q ss_pred HHHHcCCEEEEEEeCCcccCCCccchhhhhcCCCCceeee
Q psy6910 173 QLEKSGCLLESGLYEGNHYGTPKPVKEPYVSLPQNVNLLP 212 (1145)
Q Consensus 173 ~~~~~~~flE~~~~~g~~YGt~~~~i~~~~~~g~~~~~il 212 (1145)
+++..++|+|+. +..|+.+.+.|+ ++|+
T Consensus 69 ~~~s~~~F~~~a----------~~~i~~i~~~g~--~pil 96 (409)
T 3eph_A 69 EEYYSHRFETEC----------MNAIEDIHRRGK--IPIV 96 (409)
T ss_dssp SCCCHHHHHHHH----------HHHHHHHHTTTC--EEEE
T ss_pred hHhhHHHHHHHH----------HHHHHHHHhcCC--CEEE
Confidence 999999999986 788999999988 7776
No 482
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=96.61 E-value=0.00033 Score=79.58 Aligned_cols=56 Identities=30% Similarity=0.518 Sum_probs=0.0
Q ss_pred ccEEEEEeccCCcccccCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCeEEEEEEeC
Q psy6910 461 EFLQIKSVVPNGPAALEGHLQTGDVLVYVNDKCVLGYTHHDMVSVFQSISPGETVQLEVCRG 522 (1145)
Q Consensus 461 ~~i~V~~v~~~g~A~~~g~l~~GD~il~vNg~~~~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 522 (1145)
.+++|.+|.+++||+++| |++||+|++|||+.+. +..++..+|+. |+.|+|+|.|+
T Consensus 254 ~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~---~~~v~l~v~R~ 309 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVV--SANDVSDVIKR---ESTLNMVVRRG 309 (332)
T ss_dssp --------------------------------------------------------------
T ss_pred CceEEEEeccCCChHHcC-CCCCCEEEEECCEECC--CHHHHHHHHhC---CCeEEEEEEEC
Confidence 468999999999999999 9999999999999996 45677777765 77899999986
No 483
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.36 E-value=0.0021 Score=54.18 Aligned_cols=28 Identities=25% Similarity=0.584 Sum_probs=26.8
Q ss_pred CcEEEEccCCceEeeeCCCCceeccCCc
Q psy6910 299 RWEKAYTEKGEVYFIDHNSSTSSWLDPR 326 (1145)
Q Consensus 299 gWe~~~~~~Gr~yyidh~t~tT~W~~Pr 326 (1145)
-|-+..+.+||+||+|..|+.+.|+.|.
T Consensus 21 ~W~~v~T~dGR~fyyN~~Tk~S~WekP~ 48 (73)
T 2dk7_A 21 PWCVVWTGDERVFFYNPTTRLSMWDRPD 48 (73)
T ss_dssp SCEEEEESSSCEEEEETTTTEECSSCCT
T ss_pred CcEEEECCCCCEEEecCcccceeccCCh
Confidence 4999999999999999999999999995
No 484
>2dk1_A WW domain-binding protein 4; WBP-4, formin- binding protein 21, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=96.06 E-value=0.0023 Score=50.49 Aligned_cols=28 Identities=36% Similarity=0.732 Sum_probs=26.6
Q ss_pred CcEEEEccCCceEeeeCCCCceeccCCc
Q psy6910 299 RWEKAYTEKGEVYFIDHNSSTSSWLDPR 326 (1145)
Q Consensus 299 gWe~~~~~~Gr~yyidh~t~tT~W~~Pr 326 (1145)
.|.+..+.+|+.||+|..|+.++|+.|.
T Consensus 8 ~W~e~~s~~G~~YYyN~~T~eS~WekP~ 35 (50)
T 2dk1_A 8 RWVEGITSEGYHYYYDLISGASQWEKPE 35 (50)
T ss_dssp CEEECCCSTTCCCEEESSSCCEESSCCT
T ss_pred CeEEEECCCCCEEEEECCCCCEEeeCCh
Confidence 4999999999999999999999999995
No 485
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=95.91 E-value=0.01 Score=77.87 Aligned_cols=70 Identities=13% Similarity=0.169 Sum_probs=57.5
Q ss_pred cceeEEEEccCCcccccEEEEEEcCC--------ChhcccC-CCCCCCEEEEECCEEcCCCCHHHHHHHHHcC-CCeEEE
Q psy6910 1043 RGFGFSIRGGREFQNMALFVLQIAEN--------GPAALDG-HLKVGDEIVEINGINTKNMTHAEAIEIIRNG-DSTVRL 1112 (1145)
Q Consensus 1043 ~~lG~sl~gg~~~~~~~v~V~~V~~g--------g~A~~~G-~L~~GD~Il~ING~~v~~~s~~eav~~lk~~-~~~v~L 1112 (1145)
.++|+.+... ..+++|..|.++ |||+++| .|+ ||+|++|||+++.++. +++.+|+.. +.+|.|
T Consensus 737 ~g~G~~~~~~----~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~~g~~v~l 809 (1045)
T 1k32_A 737 GRIACDFKLD----GDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEKAGTSARI 809 (1045)
T ss_dssp CBCSEEEEEE----TTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTTTTSEEEE
T ss_pred ceecEEEEEe----CCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCCCCCEEEE
Confidence 3678877542 346899999998 9999999 489 9999999999999764 778888874 467999
Q ss_pred EEEeCCC
Q psy6910 1113 LIKRGGS 1119 (1145)
Q Consensus 1113 ~v~R~~~ 1119 (1145)
+|.|+++
T Consensus 810 ~v~r~~~ 816 (1045)
T 1k32_A 810 RLSGKGG 816 (1045)
T ss_dssp EEECSSS
T ss_pred EEECCCC
Confidence 9999763
No 486
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=95.60 E-value=0.00035 Score=77.42 Aligned_cols=88 Identities=15% Similarity=0.104 Sum_probs=69.1
Q ss_pred CcEEEEEecCCccCcccchhccccCCCCchHHHHhhhhcc--------CcceeecccccCCCCCCCcCCccEEEeCHHHH
Q psy6910 100 KTLTLRTVSSAYVTTDLRQFLNTRFPKGSVDHDLQNIIRD--------NLYLRTVPVTTRTPRDGELNGVDYTFLSIEEF 171 (1145)
Q Consensus 100 ~~v~~~~~p~~~~~~~~~~~~~l~f~k~~i~~~l~~~~~~--------~~~~~~v~~TTR~~r~~E~~g~~Y~fvs~~~f 171 (1145)
..+.+.++|++++ |++|...|.+.+.. .+| ..+++||++|+++|.+|++|||++..+|
T Consensus 10 ~~~i~i~GptgsG-------------Kt~la~~La~~~~~~iis~Ds~qvY-~~~~igTakp~~~E~~~v~hhlid~~~~ 75 (316)
T 3foz_A 10 PKAIFLMGPTASG-------------KTALAIELRKILPVELISVDSALIY-KGMDIGTAKPNAEELLAAPHRLLDIRDP 75 (316)
T ss_dssp CEEEEEECCTTSC-------------HHHHHHHHHHHSCEEEEECCTTTTB-TTCCTTTTCCCHHHHHHSCEETSSCBCT
T ss_pred CcEEEEECCCccC-------------HHHHHHHHHHhCCCcEEeccccccc-ccccccCCCCCHHHHcCCCEEEeccCCc
Confidence 4677888998886 77888887776421 245 4889999999999999999999999998
Q ss_pred HHHHHcCCEEEEEEeCCcccCCCccchhhhhcCCCCceeeec
Q psy6910 172 KQLEKSGCLLESGLYEGNHYGTPKPVKEPYVSLPQNVNLLPG 213 (1145)
Q Consensus 172 ~~~~~~~~flE~~~~~g~~YGt~~~~i~~~~~~g~~~~~il~ 213 (1145)
.+.... ++||......|+++.+.|+ ++|+-
T Consensus 76 ~e~~s~----------~~f~~~a~~~i~~i~~~g~--~pilV 105 (316)
T 3foz_A 76 SQAYSA----------ADFRRDALAEMADITAAGR--IPLLV 105 (316)
T ss_dssp TSCCCH----------HHHHHHHHHHHHHHHHTTC--EEEEE
T ss_pred cccccH----------HHHHHHHHHHHHHHHhCCC--cEEEE
Confidence 766544 4556667789999999988 76653
No 487
>1yw5_A Peptidyl prolyl CIS/trans isomerase; WW-domain, ppiase domain, ordered linker; 1.60A {Candida albicans}
Probab=95.07 E-value=0.017 Score=59.01 Aligned_cols=33 Identities=30% Similarity=0.734 Sum_probs=30.0
Q ss_pred CCCCCCcEEEEccC-CceEeeeCCCCceeccCCc
Q psy6910 294 GPLPPRWEKAYTEK-GEVYFIDHNSSTSSWLDPR 326 (1145)
Q Consensus 294 ~pLP~gWe~~~~~~-Gr~yyidh~t~tT~W~~Pr 326 (1145)
..||+|||.+++.+ |+.||.|..|+..+|..|.
T Consensus 6 ~~lp~~w~~~~s~s~~~~Yy~~~~~~~~~~~~~~ 39 (177)
T 1yw5_A 6 TGLPPNWTIRVSRSHNKEYFLNQSTNESSWDPPY 39 (177)
T ss_dssp CCCCTTEEEEECSSTTCEEEEETTTCCEESSCCT
T ss_pred CCCCchHHHHhcccCCchhhhhHHHhhHhhcCcc
Confidence 45999999999964 9999999999999999985
No 488
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=94.81 E-value=0.0023 Score=69.54 Aligned_cols=125 Identities=8% Similarity=-0.007 Sum_probs=75.6
Q ss_pred EEEEEecCCccCcccchhccccCCCCchHHHHhhhhcc-----Cc--ceeecccccCCCCCCCcCCccEEEeCHHHHHH-
Q psy6910 102 LTLRTVSSAYVTTDLRQFLNTRFPKGSVDHDLQNIIRD-----NL--YLRTVPVTTRTPRDGELNGVDYTFLSIEEFKQ- 173 (1145)
Q Consensus 102 v~~~~~p~~~~~~~~~~~~~l~f~k~~i~~~l~~~~~~-----~~--~~~~v~~TTR~~r~~E~~g~~Y~fvs~~~f~~- 173 (1145)
+.+.++|++++ |+++.+.|.+.+.- +. ...-..++|+.|+..|..|..|||++..++.+
T Consensus 3 li~I~G~~GSG-------------KSTla~~La~~~~~~~i~~D~~~~~~~~~~~t~~~~~~e~~~~~~~~~~~~~~~~~ 69 (253)
T 2ze6_A 3 LHLIYGPTCSG-------------KTDMAIQIAQETGWPVVALDRVQCCPQIATGSGRPLESELQSTRRIYLDSRPLTEG 69 (253)
T ss_dssp EEEEECCTTSS-------------HHHHHHHHHHHHCCCEEECCSGGGCGGGTTTTTCCCGGGGTTCCEECSCCCCGGGC
T ss_pred EEEEECCCCcC-------------HHHHHHHHHhcCCCeEEeccHHhccCCCccccCCCCHHHHhCCCeEEEeeeccccc
Confidence 66778888885 77888777665321 11 11234678999999999999999987543321
Q ss_pred HHHcCCEEEEEEeCCcccCCCccchhhhhcCCCCceeeecCCCChhhhhhhhcc-----cccccceeEecCCChhhhhhh
Q psy6910 174 LEKSGCLLESGLYEGNHYGTPKPVKEPYVSLPQNVNLLPGAHPSSEGKRKRNRS-----NVEAMASKSIEPDMKTNGFDN 248 (1145)
Q Consensus 174 ~~~~~~flE~~~~~g~~YGt~~~~i~~~~~~g~~~~~il~~~~~~~~~~~~~~~-----~~~~~~~ifi~pps~~~l~~r 248 (1145)
.... ..+.-.....+ ++++.|+ .+|++... ....+.+.+. ..+.. .||+.+|..+++.+|
T Consensus 70 ~~~~----------~~f~~~~~~~i-~~~~~g~--~vIl~gg~-~~~~~~~~~~~~~~~~~~~~-~i~l~~~~~e~l~~R 134 (253)
T 2ze6_A 70 ILDA----------ESAHRRLIFEV-DWRKSEE--GLILEGGS-ISLLNCMAKSPFWRSGFQWH-VKRLRLGDSDAFLTR 134 (253)
T ss_dssp SCCH----------HHHHHHHHHHH-HTTTTSS--EEEEEECC-HHHHHHHHHCTTTTSSCEEE-EEECCCCCHHHHHHH
T ss_pred cccH----------HHHHHHHHHHH-HHHhCCC--CeEEeccH-HHHHHHHHhcccccccCceE-EEEecchhHHHHHHH
Confidence 0000 01111234555 6667765 77776332 1122222111 12335 789999988999999
Q ss_pred hhccCC
Q psy6910 249 KTVNMG 254 (1145)
Q Consensus 249 l~~rg~ 254 (1145)
+.+|.+
T Consensus 135 l~~R~~ 140 (253)
T 2ze6_A 135 AKQRVA 140 (253)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999864
No 489
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.72 E-value=0.02 Score=48.30 Aligned_cols=29 Identities=7% Similarity=0.236 Sum_probs=27.1
Q ss_pred CceeeeCCCCceEEEeCCCceeeCcCCcc
Q psy6910 345 GWERIDDPAYGTYYIDHVNKQTQYENPVL 373 (1145)
Q Consensus 345 gWe~~~~~~g~~yyinh~~k~t~~~~P~~ 373 (1145)
.|-...+.+|++||+|..|++++|+.|.-
T Consensus 21 ~W~~v~T~dGR~fyyN~~Tk~S~WekP~e 49 (73)
T 2dk7_A 21 PWCVVWTGDERVFFYNPTTRLSMWDRPDD 49 (73)
T ss_dssp SCEEEEESSSCEEEEETTTTEECSSCCTT
T ss_pred CcEEEECCCCCEEEecCcccceeccCChH
Confidence 59999999999999999999999999953
No 490
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1
Probab=94.55 E-value=0.0012 Score=69.99 Aligned_cols=150 Identities=13% Similarity=-0.002 Sum_probs=80.6
Q ss_pred CCcEEEEEecCCccCcccchhccccCCCCchHHHHhhhhccCcceeecccccCC-CCCCCcCCccE-------EEeCHHH
Q psy6910 99 GKTLTLRTVSSAYVTTDLRQFLNTRFPKGSVDHDLQNIIRDNLYLRTVPVTTRT-PRDGELNGVDY-------TFLSIEE 170 (1145)
Q Consensus 99 ~~~v~~~~~p~~~~~~~~~~~~~l~f~k~~i~~~l~~~~~~~~~~~~v~~TTR~-~r~~E~~g~~Y-------~fvs~~~ 170 (1145)
...+.+.++|++++ |+|+.+.|.+.+ +.....+..++|. ++.++..|..+ .+++.+.
T Consensus 4 ~~~~I~l~G~~GsG-------------KsT~~~~La~~l--~~~~i~~d~~~~~~~~~~~~~g~~i~~~~~~g~~~~~~~ 68 (222)
T 1zak_A 4 DPLKVMISGAPASG-------------KGTQCELIKTKY--QLAHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVPDEI 68 (222)
T ss_dssp CSCCEEEEESTTSS-------------HHHHHHHHHHHH--CCEECCHHHHHHHHHHHTCHHHHHHHHHHHTTCCCCHHH
T ss_pred CCeEEEEECCCCCC-------------HHHHHHHHHHHh--CCceecHHHHHHHHHHcCCchhHHHHHHHHcCCcCCHHH
Confidence 34567778888885 777777777665 2222233333443 22233223221 2677777
Q ss_pred HHHHHHcCCEEEEEEeCCc-ccCCCcc--chhhhhcCCC--CceeeecCCCChhhhhhhhccc----ccccceeEecCCC
Q psy6910 171 FKQLEKSGCLLESGLYEGN-HYGTPKP--VKEPYVSLPQ--NVNLLPGAHPSSEGKRKRNRSN----VEAMASKSIEPDM 241 (1145)
Q Consensus 171 f~~~~~~~~flE~~~~~g~-~YGt~~~--~i~~~~~~g~--~~~~il~~~~~~~~~~~~~~~~----~~~~~~ifi~pps 241 (1145)
|..++++.-+.++...+|. ++|.++. .++.....+. ..++.|++++.....+...+.. ...+ .+|+.||+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~vidg~~~~~~~~~~l~~~~~~~~~vi~L~~~~~~~~~R~~~r~~~~~~g~~~-~~~~~pp~ 147 (222)
T 1zak_A 69 VVNMVKERLRQPDAQENGWLLDGYPRSYSQAMALETLEIRPDTFILLDVPDELLVERVVGRRLDPVTGKIY-HLKYSPPE 147 (222)
T ss_dssp HHHHHHHHHHSHHHHHTCEEEESCCCSHHHHHHHHTTTCCCSEEEEEECCHHHHHHHHTTEEECTTTCCEE-ESSSSCCC
T ss_pred HHHHHHHHHhhccccCCcEEEECCCCCHHHHHHHHHcCCCCCEEEEEECCHHHHHHHHHcCCcccccCCcc-ccccCCCc
Confidence 7766543322111111222 3454432 3333333322 3467777665433222221211 1234 78899999
Q ss_pred hhhhhhhhhccCCCCcccccccC
Q psy6910 242 KTNGFDNKTVNMGNSSDYELNDN 264 (1145)
Q Consensus 242 ~~~l~~rl~~rg~~s~~~i~~~~ 264 (1145)
.+++.+||..|+.+..+.+.+|+
T Consensus 148 ~~~~~~~l~~r~~d~~~~i~~Rl 170 (222)
T 1zak_A 148 NEEIASRLTQRFDDTEEKVKLRL 170 (222)
T ss_dssp SSGGGGGCBCCTTCCTTHHHHHH
T ss_pred ccccccccccCCCCCHHHHHHHH
Confidence 99999999999888888887664
No 491
>2dk1_A WW domain-binding protein 4; WBP-4, formin- binding protein 21, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=94.45 E-value=0.018 Score=45.42 Aligned_cols=29 Identities=24% Similarity=0.345 Sum_probs=26.8
Q ss_pred CceeeeCCCCceEEEeCCCceeeCcCCcc
Q psy6910 345 GWERIDDPAYGTYYIDHVNKQTQYENPVL 373 (1145)
Q Consensus 345 gWe~~~~~~g~~yyinh~~k~t~~~~P~~ 373 (1145)
.|.+..+++|+.||+|..|++++|+.|.-
T Consensus 8 ~W~e~~s~~G~~YYyN~~T~eS~WekP~~ 36 (50)
T 2dk1_A 8 RWVEGITSEGYHYYYDLISGASQWEKPEG 36 (50)
T ss_dssp CEEECCCSTTCCCEEESSSCCEESSCCTT
T ss_pred CeEEEECCCCCEEEEECCCCCEEeeCChh
Confidence 59999999999999999999999999953
No 492
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum}
Probab=90.75 E-value=0.027 Score=60.61 Aligned_cols=123 Identities=7% Similarity=-0.046 Sum_probs=74.2
Q ss_pred CCcEEEEEecCCccCcccchhccccCCCCchHHHHhhhhccCcceeecccccCCC-CCCCcCCccEEEeCHHHHHHHHHc
Q psy6910 99 GKTLTLRTVSSAYVTTDLRQFLNTRFPKGSVDHDLQNIIRDNLYLRTVPVTTRTP-RDGELNGVDYTFLSIEEFKQLEKS 177 (1145)
Q Consensus 99 ~~~v~~~~~p~~~~~~~~~~~~~l~f~k~~i~~~l~~~~~~~~~~~~v~~TTR~~-r~~E~~g~~Y~fvs~~~f~~~~~~ 177 (1145)
...+.+.++|++++ |+|+.+.|.+.+ ++....+..+.|.. +.++.. -++|.+.+.+
T Consensus 28 ~~~~I~l~G~~GsG-------------KsT~a~~L~~~~--g~~~is~~~~~r~~~~~~~~~--------g~~i~~~~~~ 84 (243)
T 3tlx_A 28 PDGRYIFLGAPGSG-------------KGTQSLNLKKSH--CYCHLSTGDLLREAAEKKTEL--------GLKIKNIINE 84 (243)
T ss_dssp CCEEEEEECCTTSS-------------HHHHHHHHHHHH--CCEEEEHHHHHHHHTTSSSHH--------HHHHHHHHHT
T ss_pred CCcEEEEECCCCCC-------------HHHHHHHHHHHh--CCeEEecHHHHHHHHhccchH--------HHHHHHHHhc
Confidence 55677888998886 889999998876 45555667777763 333332 2478888999
Q ss_pred CCEEEEEEeCCcccCCCccchhhhhcCCCCceeeecCCCChhhhh-hhhc------ccccccceeEecCCChhhhhhhhh
Q psy6910 178 GCLLESGLYEGNHYGTPKPVKEPYVSLPQNVNLLPGAHPSSEGKR-KRNR------SNVEAMASKSIEPDMKTNGFDNKT 250 (1145)
Q Consensus 178 ~~flE~~~~~g~~YGt~~~~i~~~~~~g~~~~~il~~~~~~~~~~-~~~~------~~~~~~~~ifi~pps~~~l~~rl~ 250 (1145)
|.|+++......++. .+... ..++ .+|+|..+...... .+.+ ..++. +|++..|. +++.+||.
T Consensus 85 g~~~~~~~~~~~~~~----~l~~~-~~~~--~~ildg~p~~~~q~~~l~~~l~~~~~~~d~--vi~l~~p~-e~~~~Rl~ 154 (243)
T 3tlx_A 85 GKLVDDQMVLSLVDE----KLKTP-QCKK--GFILDGYPRNVKQAEDLNKLLQKNQTKLDG--VFYFNVPD-EVLVNRIS 154 (243)
T ss_dssp TCCCCHHHHHHHHHH----HTTSG-GGSS--EEEEESCCCSHHHHHHHHHHHHHTTCCCCE--EEEEECCH-HHHHHHHH
T ss_pred CCCCcHHHHHHHHHH----HHhcc-cccC--CEEecCCCCcHHHHHHHHHHHHHcCCCCce--EEEEeCCH-HHHHHHHH
Confidence 998876444322221 11111 2244 67888665332211 1111 12333 45555555 89999999
Q ss_pred ccCC
Q psy6910 251 VNMG 254 (1145)
Q Consensus 251 ~rg~ 254 (1145)
+|+.
T Consensus 155 ~R~~ 158 (243)
T 3tlx_A 155 GRLI 158 (243)
T ss_dssp TEEE
T ss_pred cCCC
Confidence 8874
No 493
>1yw5_A Peptidyl prolyl CIS/trans isomerase; WW-domain, ppiase domain, ordered linker; 1.60A {Candida albicans}
Probab=90.71 E-value=0.21 Score=50.76 Aligned_cols=33 Identities=15% Similarity=0.465 Sum_probs=29.9
Q ss_pred CCCCCCceeeeCC-CCceEEEeCCCceeeCcCCc
Q psy6910 340 DELPYGWERIDDP-AYGTYYIDHVNKQTQYENPV 372 (1145)
Q Consensus 340 ~~LP~gWe~~~~~-~g~~yyinh~~k~t~~~~P~ 372 (1145)
..||+||+.+.+. .++.||.|..++..+|+.|.
T Consensus 6 ~~lp~~w~~~~s~s~~~~Yy~~~~~~~~~~~~~~ 39 (177)
T 1yw5_A 6 TGLPPNWTIRVSRSHNKEYFLNQSTNESSWDPPY 39 (177)
T ss_dssp CCCCTTEEEEECSSTTCEEEEETTTCCEESSCCT
T ss_pred CCCCchHHHHhcccCCchhhhhHHHhhHhhcCcc
Confidence 4699999999986 78999999999999999884
No 494
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6
Probab=90.51 E-value=0.019 Score=63.60 Aligned_cols=145 Identities=12% Similarity=0.037 Sum_probs=74.3
Q ss_pred CCCCcEEEEEecCCccCcccchhccccCCCCchHHHHhhhhc----------cCccee-ecccccCCCCCCCcCC-ccEE
Q psy6910 97 RSGKTLTLRTVSSAYVTTDLRQFLNTRFPKGSVDHDLQNIIR----------DNLYLR-TVPVTTRTPRDGELNG-VDYT 164 (1145)
Q Consensus 97 ~~~~~v~~~~~p~~~~~~~~~~~~~l~f~k~~i~~~l~~~~~----------~~~~~~-~v~~TTR~~r~~E~~g-~~Y~ 164 (1145)
..+..|....+|++++ |+|+.+.|.+.+. -+-|+. .+..+++.++++|.+| .+|.
T Consensus 2 s~~~~iIgItG~sGSG-------------KSTva~~L~~~lg~~~~~~~vI~~D~~~r~~~~~~~~~~~~~~~~g~~~~~ 68 (290)
T 1a7j_A 2 SKKHPIISVTGSSGAG-------------TSTVKHTFDQIFRREGVKAVSIEGDAFHRFNRADMKAELDRRYAAGDATFS 68 (290)
T ss_dssp CTTSCEEEEESCC----------------CCTHHHHHHHHHHHHTCCEEEEEGGGGBSCCHHHHHHHHHHHHHHTCTTCS
T ss_pred CCCceEEEEECCCCCC-------------HHHHHHHHHHHHhhcCCCeeEeecchhhcCCHHHhhhhhhhhhhccCcCcC
Confidence 3456677778888886 7788877766432 122322 3444554444555555 5565
Q ss_pred EeCHHHH--------HHHHHcCCEEEEEEe-----CCcccCCCccchhh--hh-cCCCCceeeecCCCChh---hhhhhh
Q psy6910 165 FLSIEEF--------KQLEKSGCLLESGLY-----EGNHYGTPKPVKEP--YV-SLPQNVNLLPGAHPSSE---GKRKRN 225 (1145)
Q Consensus 165 fvs~~~f--------~~~~~~~~flE~~~~-----~g~~YGt~~~~i~~--~~-~~g~~~~~il~~~~~~~---~~~~~~ 225 (1145)
|.+.+.| ...+..++.+++-.| ++..|+.....+.. .+ .... ++|++. +... .-..+.
T Consensus 69 ~fg~~~~d~~~l~~~l~~l~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~--vvIvEG-~~~~~~~~~~~v~ 145 (290)
T 1a7j_A 69 HFSYEANELKELERVFREYGETGQGRTRTYVHDDAEAARTGVAPGNFTDWRDFDSDSH--LLFYEG-LHGAVVNSEVNIA 145 (290)
T ss_dssp TTSGGGBCHHHHHHHHHHHHHHSCCEECCCC------CCSSCCTTSCCCCEECCSSCS--EEEEEE-SCTTCBCSSCBCG
T ss_pred CCChhhhcHHHHHHHHHHHHcCCcccceeeccccccccccCCCCCccccccccCCCCC--EEEEEe-cccccccchHhHH
Confidence 5333332 234456677788766 23677776555532 12 2222 566652 1110 001122
Q ss_pred cccccccceeEecCCChhhhhhhhhc----cCCCCcccc
Q psy6910 226 RSNVEAMASKSIEPDMKTNGFDNKTV----NMGNSSDYE 260 (1145)
Q Consensus 226 ~~~~~~~~~ifi~pps~~~l~~rl~~----rg~~s~~~i 260 (1145)
+. .+ . .|||.+|....+++|++. ||.+.++.+
T Consensus 146 ~~-~D-~-~IfV~a~~~~rl~Rrl~Rd~~~RG~s~e~v~ 181 (290)
T 1a7j_A 146 GL-AD-L-KIGVVPVINLEWIQKIHRDRATRGYTTEAVT 181 (290)
T ss_dssp GG-CS-E-EEEEEECHHHHHHHHHHHTSSSCCSCCCCHH
T ss_pred Hh-CC-E-EEEEECCHHHHHHHHhhhhhhhcCCChHHHH
Confidence 21 23 3 799999998888887753 365444433
No 495
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=90.14 E-value=0.2 Score=50.41 Aligned_cols=125 Identities=9% Similarity=0.015 Sum_probs=70.1
Q ss_pred CCcEEEEEecCCccCcccchhccccCCCCchHHHHhhhhccCcceeeccc----ccCCCCCC-CcCCccEEEeCHHHHHH
Q psy6910 99 GKTLTLRTVSSAYVTTDLRQFLNTRFPKGSVDHDLQNIIRDNLYLRTVPV----TTRTPRDG-ELNGVDYTFLSIEEFKQ 173 (1145)
Q Consensus 99 ~~~v~~~~~p~~~~~~~~~~~~~l~f~k~~i~~~l~~~~~~~~~~~~v~~----TTR~~r~~-E~~g~~Y~fvs~~~f~~ 173 (1145)
.+.+.+.++|++++ |+|+.+.|.+.+... |. .+.. .+++++.+ +.+|.+|. .
T Consensus 2 ~~~~i~l~G~~GsG-------------KST~a~~La~~l~~~-~~-~~~~D~~~~~~~~~~~~~~~~~~~~--~------ 58 (178)
T 1qhx_A 2 TTRMIILNGGSSAG-------------KSGIVRCLQSVLPEP-WL-AFGVDSLIEAMPLKMQSAEGGIEFD--A------ 58 (178)
T ss_dssp CCCEEEEECCTTSS-------------HHHHHHHHHHHSSSC-EE-EEEHHHHHHHSCGGGGTSTTSEEEC--T------
T ss_pred CceEEEEECCCCCC-------------HHHHHHHHHHhcCCC-eE-EeccchHhhhcchhhccchhhcccc--C------
Confidence 46788889999986 889999988875322 22 2221 24555433 34455542 0
Q ss_pred HHHcCCEEEEEEeCCcccCCCccchhhhhcCCCCceeeecCCCC-hhh-hhhhhccccc--ccceeEecCCChhhhhhhh
Q psy6910 174 LEKSGCLLESGLYEGNHYGTPKPVKEPYVSLPQNVNLLPGAHPS-SEG-KRKRNRSNVE--AMASKSIEPDMKTNGFDNK 249 (1145)
Q Consensus 174 ~~~~~~flE~~~~~g~~YGt~~~~i~~~~~~g~~~~~il~~~~~-~~~-~~~~~~~~~~--~~~~ifi~pps~~~l~~rl 249 (1145)
.+++.. .+....+|+.....+....+.|. .+|++.... ... ...+++.+.. .. +||+.+ +.+++.+|+
T Consensus 59 ---~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~--~vi~~~~~~~~~~~~~~~~~~~~~~~~~-~v~l~~-~~e~l~~R~ 130 (178)
T 1qhx_A 59 ---DGGVSI-GPEFRALEGAWAEGVVAMARAGA--RIIIDDVFLGGAAAQERWRSFVGDLDVL-WVGVRC-DGAVAEGRE 130 (178)
T ss_dssp ---TSCEEE-CHHHHHHHHHHHHHHHHHHHTTC--EEEEEECCTTTHHHHHHHHHHHTTCCEE-EEEEEC-CHHHHHHHH
T ss_pred ---CCcccc-chhHHHHHHHHHHHHHHHHhcCC--eEEEEeccccChHHHHHHHHHhcCCcEE-EEEEEC-CHHHHHHHH
Confidence 111121 11122445555556777777866 888887541 111 1222333322 23 566665 579999999
Q ss_pred hccCC
Q psy6910 250 TVNMG 254 (1145)
Q Consensus 250 ~~rg~ 254 (1145)
+.|+.
T Consensus 131 ~~r~~ 135 (178)
T 1qhx_A 131 TARGD 135 (178)
T ss_dssp HHTSS
T ss_pred HhhCC
Confidence 98874
No 496
>3le4_A Microprocessor complex subunit DGCR8; WW motif, dimerization, 3D domain swapping, heme binding, MI processing, heme, iron, metal-binding, nucleus; 1.70A {Homo sapiens}
Probab=88.40 E-value=0.55 Score=39.18 Aligned_cols=37 Identities=22% Similarity=0.550 Sum_probs=33.0
Q ss_pred ccCCCCCCCCcEEEEccCCceEeeeCCCCceeccCCc
Q psy6910 290 ELDLGPLPPRWEKAYTEKGEVYFIDHNSSTSSWLDPR 326 (1145)
Q Consensus 290 ~~~~~pLP~gWe~~~~~~Gr~yyidh~t~tT~W~~Pr 326 (1145)
.+...+||+||-+-.-.+|-..|+...||.-+|.+|=
T Consensus 23 ~~~~~~LPeGW~~v~H~SGmP~YlH~~trV~T~SrPY 59 (79)
T 3le4_A 23 RPPTEPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPY 59 (79)
T ss_dssp -CCCCCCCTTEEEEECTTSSEEEEETTTTEEESSCCC
T ss_pred CCcCCcCCCccEEEEecCCceEEEeccceEEeccCCe
Confidence 3456789999999998999999999999999999994
No 497
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=88.16 E-value=0.01 Score=66.47 Aligned_cols=87 Identities=10% Similarity=0.008 Sum_probs=61.9
Q ss_pred cEEEEEecCCccCcccchhccccCCCCchHHHHhhhhcc--------CcceeecccccCCCCCCCcCCccEEEeCHHHHH
Q psy6910 101 TLTLRTVSSAYVTTDLRQFLNTRFPKGSVDHDLQNIIRD--------NLYLRTVPVTTRTPRDGELNGVDYTFLSIEEFK 172 (1145)
Q Consensus 101 ~v~~~~~p~~~~~~~~~~~~~l~f~k~~i~~~l~~~~~~--------~~~~~~v~~TTR~~r~~E~~g~~Y~fvs~~~f~ 172 (1145)
.+.+.++|++++ |+++...|.+.+.- ..|. -.+++|++|+..|.+|+.|||++..+|.
T Consensus 6 ~~i~i~GptGsG-------------KTtla~~La~~l~~~iis~Ds~qvy~-~~~igTakp~~~e~~gvph~lid~~~~~ 71 (323)
T 3crm_A 6 PAIFLMGPTAAG-------------KTDLAMALADALPCELISVDSALIYR-GMDIGTAKPSRELLARYPHRLIDIRDPA 71 (323)
T ss_dssp EEEEEECCTTSC-------------HHHHHHHHHHHSCEEEEEECTTTTBT-TCCTTTTCCCHHHHHHSCEETSSCBCTT
T ss_pred cEEEEECCCCCC-------------HHHHHHHHHHHcCCcEEeccchhhhc-CCCcccCCCCHHHHcCCCEEEeeccCcc
Confidence 577888998886 77888777766421 1232 5688999999999999999999877665
Q ss_pred HHHHcCCEEEEEEeCCcccCCCccchhhhhcCCCCceeeec
Q psy6910 173 QLEKSGCLLESGLYEGNHYGTPKPVKEPYVSLPQNVNLLPG 213 (1145)
Q Consensus 173 ~~~~~~~flE~~~~~g~~YGt~~~~i~~~~~~g~~~~~il~ 213 (1145)
+....+.|+++. ...|+++++.|+ .+|+-
T Consensus 72 ~~~~~~~F~~~a----------~~~i~~i~~~g~--~~Ilv 100 (323)
T 3crm_A 72 ESYSAAEFRADA----------LAAMAKATARGR--IPLLV 100 (323)
T ss_dssp SCCCHHHHHHHH----------HHHHHHHHHTTC--EEEEE
T ss_pred cccCHHHHHHHH----------HHHHHHHHHcCC--eEEEE
Confidence 443333443332 677888888877 66664
No 498
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=86.84 E-value=0.036 Score=62.34 Aligned_cols=87 Identities=8% Similarity=0.003 Sum_probs=58.3
Q ss_pred cEEEEEecCCccCcccchhccccCCCCchHHHHhhhhcc------Cc-ceeecccccCCCCCCCcCCccEEEeCHHHHHH
Q psy6910 101 TLTLRTVSSAYVTTDLRQFLNTRFPKGSVDHDLQNIIRD------NL-YLRTVPVTTRTPRDGELNGVDYTFLSIEEFKQ 173 (1145)
Q Consensus 101 ~v~~~~~p~~~~~~~~~~~~~l~f~k~~i~~~l~~~~~~------~~-~~~~v~~TTR~~r~~E~~g~~Y~fvs~~~f~~ 173 (1145)
.+.+.++|++++ |+++...|.+.+.- .+ +.....++|+.|+..|..|+.|||++..++.+
T Consensus 8 ~lI~I~GptgSG-------------KTtla~~La~~l~~~iis~Ds~qvYr~~~i~Takp~~eE~~~v~hhl~di~~~~~ 74 (340)
T 3d3q_A 8 FLIVIVGPTASG-------------KTELSIEVAKKFNGEIISGDSMQVYQGMDIGTAKVTTEEMEGIPHYMIDILPPDA 74 (340)
T ss_dssp EEEEEECSTTSS-------------HHHHHHHHHHHTTEEEEECCSSTTBTTCCTTTTCCCTTTTTTCCEESSSCBCTTS
T ss_pred ceEEEECCCcCc-------------HHHHHHHHHHHcCCceeccccccccccccccccCCCHHHHHHHHHHHHHHhCCcc
Confidence 577788898885 77777777665421 11 13478899999999999999999988655443
Q ss_pred HHHcCCEEEEEEeCCcccCCCccchhhhhcCCCCceeee
Q psy6910 174 LEKSGCLLESGLYEGNHYGTPKPVKEPYVSLPQNVNLLP 212 (1145)
Q Consensus 174 ~~~~~~flE~~~~~g~~YGt~~~~i~~~~~~g~~~~~il 212 (1145)
.+..+.| .-.....+..++..|+ .+|+
T Consensus 75 ~~~~~dF----------~~~a~~~i~~i~~~g~--~~Il 101 (340)
T 3d3q_A 75 SFSAYEF----------KKRAEKYIKDITRRGK--VPII 101 (340)
T ss_dssp CCCHHHH----------HHHHHHHHHHHHHTTC--EEEE
T ss_pred ccCHHHH----------HHHHHHHHHHHHhCCC--cEEE
Confidence 2222222 2223566777777766 6666
No 499
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis}
Probab=84.58 E-value=0.14 Score=54.33 Aligned_cols=138 Identities=12% Similarity=-0.022 Sum_probs=77.6
Q ss_pred HHHHHHhhcCCCCcEEEEEecCCccCcccchhccccCCCCchHHHHhhhhccCcc---eeecccccCCCCCCCcCCccEE
Q psy6910 88 TIAWLNHCCRSGKTLTLRTVSSAYVTTDLRQFLNTRFPKGSVDHDLQNIIRDNLY---LRTVPVTTRTPRDGELNGVDYT 164 (1145)
Q Consensus 88 ~~~~l~~~~~~~~~v~~~~~p~~~~~~~~~~~~~l~f~k~~i~~~l~~~~~~~~~---~~~v~~TTR~~r~~E~~g~~Y~ 164 (1145)
.+.+....|. .|.+....+|.+++ |+|+++.|.+.+. ..| .+.| .+||.|+..+. |
T Consensus 14 ~~~~~~~~m~-~g~~I~~eG~~GsG-------------KsT~~~~l~~~l~-~~~~~~g~~v-~~~rep~~t~~-g---- 72 (227)
T 3v9p_A 14 AQTQGPGSMA-RGKFITFEGIDGAG-------------KTTHLQWFCDRLQ-ERLGPAGRHV-VVTREPGGTRL-G---- 72 (227)
T ss_dssp ---------C-CCCEEEEECCC----------------CHHHHHHHHHHHH-HHHGGGTCCE-EEEESSSSSHH-H----
T ss_pred HHHhcCcccc-CCeEEEEECCCCCC-------------HHHHHHHHHHHHH-hhccccceee-eeecCCCCChH-H----
Confidence 4444444443 67777777888876 8899988887763 221 2233 57899864432 2
Q ss_pred EeCHHHHHHHHHcCCEE---EEEEeCCcccCCCccchhhhhcCCCCceeeecCC-------------CChhhhhhhhccc
Q psy6910 165 FLSIEEFKQLEKSGCLL---ESGLYEGNHYGTPKPVKEPYVSLPQNVNLLPGAH-------------PSSEGKRKRNRSN 228 (1145)
Q Consensus 165 fvs~~~f~~~~~~~~fl---E~~~~~g~~YGt~~~~i~~~~~~g~~~~~il~~~-------------~~~~~~~~~~~~~ 228 (1145)
+.+.+.+.++++- |+-.|-.+.|..-.+.|++.+++|+ +||+|== ....-+..+.+..
T Consensus 73 ----~~ir~~l~~~~~~~~~~~llf~a~R~~~~~~~i~p~l~~g~--~VI~DRy~~S~~ayq~~~~gl~~~~~~~l~~~~ 146 (227)
T 3v9p_A 73 ----ETLREILLNQPMDLETEALLMFAGRREHLALVIEPALARGD--WVVSDRFTDATFAYQGGGRGLPRDKLEALERWV 146 (227)
T ss_dssp ----HHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTHHHHHHTTC--EEEEECCHHHHHHHHTTTTCCCHHHHHHHHHHH
T ss_pred ----HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCC--EEEEeccHhHHHHHhhhccCCCHHHHHHHHHHH
Confidence 5678888777532 2223556777777778999999977 8888711 0111122222211
Q ss_pred ---ccccceeEecCCChhhhhhhhhccC
Q psy6910 229 ---VEAMASKSIEPDMKTNGFDNKTVNM 253 (1145)
Q Consensus 229 ---~~~~~~ifi~pps~~~l~~rl~~rg 253 (1145)
+.+-.+||+..|. +++.+|+.+|+
T Consensus 147 ~~~~~PDl~I~Ldv~~-e~~~~Ri~~R~ 173 (227)
T 3v9p_A 147 QGGFQPDLTVLFDVPP-QIASARRGAVR 173 (227)
T ss_dssp HTTCCCSEEEEEECCS-SCGGGTTTCCC
T ss_pred hcCCCCCEEEEEeCCH-HHHHHHHHhcc
Confidence 2222156776664 88899999886
No 500
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=79.27 E-value=0.45 Score=50.43 Aligned_cols=125 Identities=14% Similarity=0.022 Sum_probs=72.3
Q ss_pred CCcEEEEEecCCccCcccchhccccCCCCchHHHHhhhhccCcceeecccccCCCCCCCcCCccEEEeCHHHHHHHHHcC
Q psy6910 99 GKTLTLRTVSSAYVTTDLRQFLNTRFPKGSVDHDLQNIIRDNLYLRTVPVTTRTPRDGELNGVDYTFLSIEEFKQLEKSG 178 (1145)
Q Consensus 99 ~~~v~~~~~p~~~~~~~~~~~~~l~f~k~~i~~~l~~~~~~~~~~~~v~~TTR~~r~~E~~g~~Y~fvs~~~f~~~~~~~ 178 (1145)
.|.+.+..+|++++ |+|+++.|.+.+.. -+ .+ .+||.|...+. -+.|.+++.++
T Consensus 25 ~g~~i~i~G~~GsG-------------KsT~~~~l~~~l~~-~~--~~-~~~~~p~~~~~---------g~~i~~~~~~~ 78 (229)
T 4eaq_A 25 MSAFITFEGPEGSG-------------KTTVINEVYHRLVK-DY--DV-IMTREPGGVPT---------GEEIRKIVLEG 78 (229)
T ss_dssp CCEEEEEECCTTSC-------------HHHHHHHHHHHHTT-TS--CE-EEECTTTTCHH---------HHHHHHHTTC-
T ss_pred CCeEEEEEcCCCCC-------------HHHHHHHHHHHHhc-CC--Cc-eeecCCCCCch---------HHHHHHHHhCC
Confidence 67777778888886 88999999888743 22 33 46777765432 35677777666
Q ss_pred CE-EEEEE---eCCcccCCCccchhhhhcCCCCceeeec----------CCC---Chhhhhhhhcc-----cccccceeE
Q psy6910 179 CL-LESGL---YEGNHYGTPKPVKEPYVSLPQNVNLLPG----------AHP---SSEGKRKRNRS-----NVEAMASKS 236 (1145)
Q Consensus 179 ~f-lE~~~---~~g~~YGt~~~~i~~~~~~g~~~~~il~----------~~~---~~~~~~~~~~~-----~~~~~~~if 236 (1145)
.+ -.+.+ |..+.|..-.+.|++.+++|+ ++|+| .-+ .......+.+. .|+. +||
T Consensus 79 ~~~~~~~~~ll~~a~r~~~~~~~i~~~l~~g~--~Vi~DRy~~s~~ayqg~~r~~~~~~~~~l~~~~~~~~~pd~--vi~ 154 (229)
T 4eaq_A 79 NDMDIRTEAMLFAASRREHLVLKVIPALKEGK--VVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDL--TIY 154 (229)
T ss_dssp --CCHHHHHHHHHHHHHHHCCCCCHHHHHTTC--EEEEECCHHHHCCCCCCCSCSCHHHHHHHHHHHHTTCCCSE--EEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC--EEEECCchhHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCE--EEE
Confidence 64 11111 223445555566788888877 88888 211 11111122211 2332 566
Q ss_pred ecCCChhhhhhhhhccCC
Q psy6910 237 IEPDMKTNGFDNKTVNMG 254 (1145)
Q Consensus 237 i~pps~~~l~~rl~~rg~ 254 (1145)
+..|. +++.+|+.+|++
T Consensus 155 L~~~~-e~~~~R~~~R~~ 171 (229)
T 4eaq_A 155 LNVSA-EVGRERIIKNSR 171 (229)
T ss_dssp EECCH-HHHHHHHHHC--
T ss_pred EeCCH-HHHHHHHHhcCC
Confidence 66664 899999999864
Done!