BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy6917
MWKDEVQDKLYMDPVGDVYPNETKVIWKFNESTLDDWIVTTDSDHNEGLSKASLAIPFSK
FFLQSKGRIQDIQNPLDTDRISSIGLSLVDQNNGPFQLELDYIGIEYDPNHTEEFAYEMY
LFENEVRGIVNW

High Scoring Gene Products

Symbol, full name Information P value
CG7598 protein from Drosophila melanogaster 2.3e-29
ndufaf1
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1
gene_product from Danio rerio 1.0e-23
NDUFAF1
Uncharacterized protein
protein from Gallus gallus 8.8e-23
NDUFAF1
Uncharacterized protein
protein from Canis lupus familiaris 2.0e-21
Ndufaf1
NADH dehydrogenase (ubiquinone) complex I, assembly factor 1
gene from Rattus norvegicus 1.4e-17
Ndufaf1
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1
protein from Mus musculus 1.7e-17
NDUFAF1
Complex I intermediate-associated protein 30, mitochondrial
protein from Homo sapiens 2.3e-17
NDUFAF1
Uncharacterized protein
protein from Bos taurus 4.7e-16

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy6917
        (132 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0039689 - symbol:CG7598 species:7227 "Drosophila m...   215  2.3e-29   2
ZFIN|ZDB-GENE-050306-9 - symbol:ndufaf1 "NADH dehydrogena...   225  1.0e-23   2
UNIPROTKB|E1BZH1 - symbol:NDUFAF1 "Uncharacterized protei...   217  8.8e-23   2
UNIPROTKB|E2RPE7 - symbol:NDUFAF1 "Uncharacterized protei...   201  2.0e-21   2
RGD|1306202 - symbol:Ndufaf1 "NADH dehydrogenase (ubiquin...   215  1.4e-17   1
MGI|MGI:1916952 - symbol:Ndufaf1 "NADH dehydrogenase (ubi...   214  1.7e-17   1
UNIPROTKB|Q9Y375 - symbol:NDUFAF1 "Complex I intermediate...   213  2.3e-17   1
UNIPROTKB|E1BAZ2 - symbol:NDUFAF1 "Uncharacterized protei...   202  4.7e-16   1


>FB|FBgn0039689 [details] [associations]
            symbol:CG7598 species:7227 "Drosophila melanogaster"
            [GO:0005747 "mitochondrial respiratory chain complex I"
            evidence=ISS] [GO:0017004 "cytochrome complex assembly"
            evidence=NAS] [GO:0006119 "oxidative phosphorylation" evidence=ISS]
            EMBL:AE014297 GO:GO:0051082 GO:GO:0005747 GO:GO:0006120
            InterPro:IPR008979 SUPFAM:SSF49785 EMBL:AY060912 RefSeq:NP_651718.1
            UniGene:Dm.3797 ProteinModelPortal:Q9VAI1 PaxDb:Q9VAI1 PRIDE:Q9VAI1
            EnsemblMetazoa:FBtr0085473 GeneID:43503 KEGG:dme:Dmel_CG7598
            UCSC:CG7598-RA FlyBase:FBgn0039689 eggNOG:NOG318203
            GeneTree:ENSGT00390000007200 InParanoid:Q9VAI1 OMA:EIDYVGL
            OrthoDB:EOG49S4P7 PhylomeDB:Q9VAI1 GenomeRNAi:43503 NextBio:834276
            Bgee:Q9VAI1 GermOnline:CG7598 InterPro:IPR013857 Pfam:PF08547
            Uniprot:Q9VAI1
        Length = 296

 Score = 215 (80.7 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
 Identities = 39/67 (58%), Positives = 51/67 (76%)

Query:    56 IPFSKFFLQSKGRIQDIQNPLDTDRISSIGLSLVDQN--NGPFQLELDYIGIEYDPNHTE 113
             IPFSKFFL SKGR+QD Q  +  +R++  G S+  +   +GPF LE+DY+G+EYDP+H E
Sbjct:   221 IPFSKFFLSSKGRVQDRQGAIPLNRVTHFGFSVAAKKGMDGPFGLEIDYVGLEYDPSHRE 280

Query:   114 EFAYEMY 120
             EFAYEMY
Sbjct:   281 EFAYEMY 287

 Score = 126 (49.4 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
 Identities = 24/57 (42%), Positives = 35/57 (61%)

Query:     1 MWKDEVQDKLYMDPVGDVYPNETKVIWKFNE-STLDDWIVTTDSDHNEGLSKASLAI 56
             +W+ EV+++   DP+    P ET V++ F     LD W VTTD+DH EG S A+L +
Sbjct:    66 LWRQEVKEQFESDPILVFRPGETDVVFDFKAPDVLDKWTVTTDADHGEGKSTATLEL 122


>ZFIN|ZDB-GENE-050306-9 [details] [associations]
            symbol:ndufaf1 "NADH dehydrogenase (ubiquinone) 1
            alpha subcomplex, assembly factor 1" species:7955 "Danio rerio"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] ZFIN:ZDB-GENE-050306-9 InterPro:IPR008979
            SUPFAM:SSF49785 GeneTree:ENSGT00390000007200 InterPro:IPR013857
            Pfam:PF08547 CTD:51103 HOGENOM:HOG000231763 HOVERGEN:HBG050960
            EMBL:BX284673 EMBL:BC090683 IPI:IPI00495424 RefSeq:NP_001013326.1
            UniGene:Dr.81793 STRING:Q5CZW0 Ensembl:ENSDART00000035940
            Ensembl:ENSDART00000144379 GeneID:503714 KEGG:dre:503714
            InParanoid:Q5CZW0 NextBio:20866269 Uniprot:Q5CZW0
        Length = 304

 Score = 225 (84.3 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
 Identities = 42/65 (64%), Positives = 54/65 (83%)

Query:    56 IPFSKFFLQSKGRIQDIQNPLDTDRISSIGLSLVDQNNGPFQLELDYIGIEYDPNHTEEF 115
             IPFSKFFL S+GRIQD Q+PL  D+I++IG +L D+ +GPFQLE+D+IG+  D  HTEEF
Sbjct:   236 IPFSKFFLSSRGRIQDSQHPLWLDKINTIGFTLGDKADGPFQLEIDFIGLNNDCAHTEEF 295

Query:   116 AYEMY 120
             AYE+Y
Sbjct:   296 AYELY 300

 Score = 62 (26.9 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
 Identities = 10/32 (31%), Positives = 22/32 (68%)

Query:    14 PVGDVYPNETKVIWKFN-ESTLDDWIVTTDSD 44
             P+ +    +T+V+W+F    +L++WIV++D +
Sbjct:    94 PIIEHMLEQTRVVWEFRGPESLNEWIVSSDQE 125


>UNIPROTKB|E1BZH1 [details] [associations]
            symbol:NDUFAF1 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
            GO:GO:0005739 InterPro:IPR008979 SUPFAM:SSF49785
            GeneTree:ENSGT00390000007200 InterPro:IPR013857 Pfam:PF08547
            CTD:51103 OMA:CAMISRI EMBL:AADN02033532 IPI:IPI00575208
            RefSeq:XP_421138.1 UniGene:Gga.5524 UniGene:Gga.55275
            Ensembl:ENSGALT00000013981 GeneID:423214 KEGG:gga:423214
            NextBio:20825716 Uniprot:E1BZH1
        Length = 303

 Score = 217 (81.4 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
 Identities = 40/67 (59%), Positives = 54/67 (80%)

Query:    54 LAIPFSKFFLQSKGRIQDIQNPLDTDRISSIGLSLVDQNNGPFQLELDYIGIEYDPNHTE 113
             + IPFSKFFL S+GR+QD Q+P+  D+IS++G +L D+ +GPFQLE+D+IG+  D  HTE
Sbjct:   231 IKIPFSKFFLSSRGRVQDDQHPIWLDKISTLGFTLGDKVDGPFQLEIDFIGLLNDRAHTE 290

Query:   114 EFAYEMY 120
             EFAYE Y
Sbjct:   291 EFAYETY 297

 Score = 61 (26.5 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
 Identities = 14/45 (31%), Positives = 26/45 (57%)

Query:     3 KDEVQDKLYMDPVGDVYPN----ETKVIWKFN-ESTLDDWIVTTD 42
             K E +D L + P G  +      +TKV+W+F  +  L+ W++++D
Sbjct:    77 KKETEDHL-VGPDGHSFSQYLLEQTKVMWEFRTQEDLNKWVISSD 120


>UNIPROTKB|E2RPE7 [details] [associations]
            symbol:NDUFAF1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
            GO:GO:0005739 InterPro:IPR008979 SUPFAM:SSF49785
            GeneTree:ENSGT00390000007200 InterPro:IPR013857 Pfam:PF08547
            CTD:51103 OMA:CAMISRI EMBL:AAEX03016074 RefSeq:XP_544629.2
            ProteinModelPortal:E2RPE7 Ensembl:ENSCAFT00000015158 GeneID:487505
            KEGG:cfa:487505 NextBio:20861088 Uniprot:E2RPE7
        Length = 328

 Score = 201 (75.8 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
 Identities = 39/63 (61%), Positives = 49/63 (77%)

Query:    56 IPFSKFFLQSKGRIQDIQNPLDTDRISSIGLSLVDQNNGPFQLELDYIGIEYDPNHTEEF 115
             IPFSKFF  ++GRI+D Q  L  D+ISSIG +L D+ +GPF LE+D+IG+  DP HTEEF
Sbjct:   255 IPFSKFFYSNQGRIRDAQYQLLLDKISSIGFTLADKVDGPFFLEIDFIGVFTDPAHTEEF 314

Query:   116 AYE 118
             AYE
Sbjct:   315 AYE 317

 Score = 68 (29.0 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
 Identities = 12/30 (40%), Positives = 20/30 (66%)

Query:    14 PVGDVYPNETKVIWKFN-ESTLDDWIVTTD 42
             P+ +V   + KV+W+F  +  LD W+VT+D
Sbjct:   113 PLHEVLLEQAKVVWQFRGKEDLDKWMVTSD 142


>RGD|1306202 [details] [associations]
            symbol:Ndufaf1 "NADH dehydrogenase (ubiquinone) complex I,
            assembly factor 1" species:10116 "Rattus norvegicus" [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
            evidence=IEA;ISO] RGD:1306202 GO:GO:0005739 InterPro:IPR008979
            SUPFAM:SSF49785 GeneTree:ENSGT00390000007200 InterPro:IPR013857
            Pfam:PF08547 OMA:CAMISRI IPI:IPI00373108 Ensembl:ENSRNOT00000006874
            Uniprot:F1LWG4
        Length = 330

 Score = 215 (80.7 bits), Expect = 1.4e-17, P = 1.4e-17
 Identities = 40/63 (63%), Positives = 51/63 (80%)

Query:    56 IPFSKFFLQSKGRIQDIQNPLDTDRISSIGLSLVDQNNGPFQLELDYIGIEYDPNHTEEF 115
             IPFSKFF  ++GRI+D+Q PL  D+ISSIG +L D+ +GPF LE+D+IG+  DP HTEEF
Sbjct:   257 IPFSKFFFSNQGRIRDVQGPLILDKISSIGFTLSDKVDGPFFLEIDFIGVFTDPAHTEEF 316

Query:   116 AYE 118
             AYE
Sbjct:   317 AYE 319


>MGI|MGI:1916952 [details] [associations]
            symbol:Ndufaf1 "NADH dehydrogenase (ubiquinone) 1 alpha
            subcomplex, assembly factor 1" species:10090 "Mus musculus"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=IDA] [GO:0008137 "NADH dehydrogenase
            (ubiquinone) activity" evidence=IEA] [GO:0008150
            "biological_process" evidence=ND] [GO:0055114 "oxidation-reduction
            process" evidence=IEA] MGI:MGI:1916952 GO:GO:0005739
            InterPro:IPR008979 SUPFAM:SSF49785 eggNOG:NOG318203
            GeneTree:ENSGT00390000007200 InterPro:IPR013857 Pfam:PF08547
            CTD:51103 HOGENOM:HOG000231763 HOVERGEN:HBG050960 OrthoDB:EOG4QJRP1
            EMBL:AK010328 EMBL:AK050343 EMBL:BC018422 IPI:IPI00226687
            RefSeq:NP_081451.3 UniGene:Mm.5390 ProteinModelPortal:Q9CWX2
            DIP:DIP-59193N STRING:Q9CWX2 PhosphoSite:Q9CWX2 PaxDb:Q9CWX2
            PRIDE:Q9CWX2 Ensembl:ENSMUST00000028768 GeneID:69702 KEGG:mmu:69702
            InParanoid:Q9CWX2 NextBio:330128 Bgee:Q9CWX2 Genevestigator:Q9CWX2
            GermOnline:ENSMUSG00000027305 Uniprot:Q9CWX2
        Length = 328

 Score = 214 (80.4 bits), Expect = 1.7e-17, P = 1.7e-17
 Identities = 39/63 (61%), Positives = 51/63 (80%)

Query:    56 IPFSKFFLQSKGRIQDIQNPLDTDRISSIGLSLVDQNNGPFQLELDYIGIEYDPNHTEEF 115
             IPFSKFF  ++GR++D+Q PL  D+ISSIG +L D+ +GPF LE+D+IG+  DP HTEEF
Sbjct:   255 IPFSKFFFSNQGRVRDVQGPLVLDKISSIGFTLSDKVDGPFFLEIDFIGVFTDPAHTEEF 314

Query:   116 AYE 118
             AYE
Sbjct:   315 AYE 317


>UNIPROTKB|Q9Y375 [details] [associations]
            symbol:NDUFAF1 "Complex I intermediate-associated protein
            30, mitochondrial" species:9606 "Homo sapiens" [GO:0006461 "protein
            complex assembly" evidence=NAS] [GO:0005747 "mitochondrial
            respiratory chain complex I" evidence=NAS] [GO:0051082 "unfolded
            protein binding" evidence=NAS] [GO:0006120 "mitochondrial electron
            transport, NADH to ubiquinone" evidence=NAS] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA]
            GO:GO:0006461 GO:GO:0051082 Orphanet:2609 GO:GO:0005747
            GO:GO:0006120 InterPro:IPR008979 SUPFAM:SSF49785 eggNOG:NOG318203
            InterPro:IPR013857 Pfam:PF08547 EMBL:AF151823 EMBL:BC000780
            IPI:IPI00032560 RefSeq:NP_057097.2 UniGene:Hs.106529
            ProteinModelPortal:Q9Y375 IntAct:Q9Y375 MINT:MINT-1438635
            STRING:Q9Y375 PhosphoSite:Q9Y375 DMDM:21542405 PaxDb:Q9Y375
            PeptideAtlas:Q9Y375 PRIDE:Q9Y375 Ensembl:ENST00000260361
            GeneID:51103 KEGG:hsa:51103 UCSC:uc001znx.3 CTD:51103
            GeneCards:GC15M041681 HGNC:HGNC:18828 HPA:HPA039933 HPA:HPA040064
            MIM:606934 neXtProt:NX_Q9Y375 Orphanet:289527 PharmGKB:PA134934729
            HOGENOM:HOG000231763 HOVERGEN:HBG050960 InParanoid:Q9Y375
            OMA:CAMISRI OrthoDB:EOG4QJRP1 PhylomeDB:Q9Y375 GenomeRNAi:51103
            NextBio:53823 Bgee:Q9Y375 CleanEx:HS_NDUFAF1 Genevestigator:Q9Y375
            GermOnline:ENSG00000137806 Uniprot:Q9Y375
        Length = 327

 Score = 213 (80.0 bits), Expect = 2.3e-17, P = 2.3e-17
 Identities = 39/63 (61%), Positives = 51/63 (80%)

Query:    56 IPFSKFFLQSKGRIQDIQNPLDTDRISSIGLSLVDQNNGPFQLELDYIGIEYDPNHTEEF 115
             IPFSKFF  ++GRI+D+Q+ L  D+ISSIG +L D+ +GPF LE+D+IG+  DP HTEEF
Sbjct:   254 IPFSKFFFSNRGRIRDVQHELPLDKISSIGFTLADKVDGPFFLEIDFIGVFTDPAHTEEF 313

Query:   116 AYE 118
             AYE
Sbjct:   314 AYE 316


>UNIPROTKB|E1BAZ2 [details] [associations]
            symbol:NDUFAF1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005739 "mitochondrion" evidence=IEA] GO:GO:0005739
            InterPro:IPR008979 SUPFAM:SSF49785 GeneTree:ENSGT00390000007200
            InterPro:IPR013857 Pfam:PF08547 CTD:51103 OMA:CAMISRI
            EMBL:DAAA02028561 IPI:IPI00700906 RefSeq:NP_001193003.1
            UniGene:Bt.73254 Ensembl:ENSBTAT00000014270 GeneID:541232
            KEGG:bta:541232 NextBio:20879082 Uniprot:E1BAZ2
        Length = 328

 Score = 202 (76.2 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 39/63 (61%), Positives = 49/63 (77%)

Query:    56 IPFSKFFLQSKGRIQDIQNPLDTDRISSIGLSLVDQNNGPFQLELDYIGIEYDPNHTEEF 115
             IPFSKFF  ++GRI+D Q  L  D+ISSIG +L D+ +GPF LE+D+IG+  DP HTEEF
Sbjct:   255 IPFSKFFFSNQGRIRDAQYQLLLDKISSIGFTLADKVDGPFFLEIDFIGVFTDPAHTEEF 314

Query:   116 AYE 118
             AYE
Sbjct:   315 AYE 317


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.137   0.418    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      132       132   0.00091  102 3  11 22  0.46    31
                                                     30  0.43    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  562 (60 KB)
  Total size of DFA:  148 KB (2091 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  14.09u 0.09s 14.18t   Elapsed:  00:00:43
  Total cpu time:  14.09u 0.09s 14.18t   Elapsed:  00:00:55
  Start:  Thu Aug 15 11:59:16 2013   End:  Thu Aug 15 12:00:11 2013

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