BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6919
(638 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P50747|BPL1_HUMAN Biotin--protein ligase OS=Homo sapiens GN=HLCS PE=1 SV=1
Length = 726
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/333 (37%), Positives = 202/333 (60%), Gaps = 36/333 (10%)
Query: 323 RHLNTK---KLGQLMKKMELEFCQSAASRAP-SEAYMPILVN-EAPSD--FNVDEYYRHL 375
+H++++ K GQL L F S S + + +P++ N EA S FN++ Y ++L
Sbjct: 405 KHVDSEGEIKSGQL----SLRFVSSYVSEVEITPSCIPVVTNMEAFSSEHFNLEIYRQNL 460
Query: 376 NTKKLGQLVIYSGVMSSSHNVLDG-----PTLLHGLTVIPRQQTQGTGRSNNIWLSPPGC 430
TK+LG++++++ V ++ +LDG P + GL VI +QT+G GR N+WLSP GC
Sbjct: 461 QTKQLGKVILFAEVTPTTMRLLDGLMFQTPQEM-GLIVIAARQTEGKGRGGNVWLSPVGC 519
Query: 431 AMFSMQLHIDLKSQLGKHLPLIQHIVAISIVLAVKSFN--QDIDLGIKWPNDLYVNGNVK 488
A+ ++ + I L+SQLG+ +P +QH++++++V AV+S QDI+L +KWPND+Y + +K
Sbjct: 520 ALSTLLISIPLRSQLGQRIPFVQHLMSVAVVEAVRSIPEYQDINLRVKWPNDIYYSDLMK 579
Query: 489 LGGIIVTSSILS-TFESQMAVCNIGVGMNLDNSQPTTCLNSI---FSANPSSPL--LSYE 542
+GG++V S+++ TF IG G N+ NS PT C+N + ++ + L L +
Sbjct: 580 IGGVLVNSTLMGETF-----YILIGCGFNVTNSNPTICINDLITEYNKQHKAELKPLRAD 634
Query: 543 QYFALVFNHLEQLMEGDFDE----IYDLYYKHWLHNNVNVTVVSERGEAQQVKIIGIDDF 598
A V LE+L++ D+ + LYY++W+H+ V + S E +V I+G+DD
Sbjct: 635 YLIARVVTVLEKLIKEFQDKGPNSVLPLYYRYWVHSGQQVHLGS--AEGPKVSIVGLDDS 692
Query: 599 GFLNVRSEEGYIFSVRPDGNTFDMLNGLIAPKQ 631
GFL V E G + +V PDGN+FDML LI PK+
Sbjct: 693 GFLQVHQEGGEVVTVHPDGNSFDMLRNLILPKR 725
>sp|Q920N2|BPL1_MOUSE Biotin--protein ligase OS=Mus musculus GN=Hlcs PE=1 SV=1
Length = 722
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 120/318 (37%), Positives = 192/318 (60%), Gaps = 31/318 (9%)
Query: 336 KMELEFCQSAASRAP-SEAYMPILVN-EAPSD--FNVDEYYRHLNTKKLGQLVIYSGVMS 391
K+ L+F S S A + + MP++ + EA S F+++ Y ++L T +LG++++++ V S
Sbjct: 413 KLSLQFVSSYTSEAEITPSSMPVVTDPEAFSSEHFSLETYRQNLQTTRLGKVILFAEVTS 472
Query: 392 SSHNVLDG-----PTLLHGLTVIPRQQTQGTGRSNNIWLSPPGCAMFSMQLHIDLKSQLG 446
++ ++LDG P + GL I +QTQG GR N WLSP GCA+ ++ + I L+SQLG
Sbjct: 473 TTMSLLDGLMFEMPQEM-GLIAIAVRQTQGKGRGPNAWLSPVGCALSTLLVFIPLRSQLG 531
Query: 447 KHLPLIQHIVAISIVLAVKSFN--QDIDLGIKWPNDLYVNGNVKLGGIIVTSSILS-TFE 503
+ +P +QH++++++V AV+S +DI+L +KWPND+Y + +K+GG++V S+++ TF
Sbjct: 532 QRIPFVQHLMSLAVVEAVRSIPGYEDINLRVKWPNDIYYSDLMKIGGVLVNSTLMGETF- 590
Query: 504 SQMAVCNIGVGMNLDNSQPTTCLNSIFSANPSS------PLLSYEQYFALVFNHLEQLME 557
IG G N+ NS PT C+N + + PL + + A LE+L++
Sbjct: 591 ----YILIGCGFNVTNSNPTICINDLIEEHNKQHGAGLKPLRA-DCLIARAVTVLEKLID 645
Query: 558 GDFDEIYD----LYYKHWLHNNVNVTVVSERGEAQQVKIIGIDDFGFLNVRSEEGYIFSV 613
D+ D LYYK+W+H V + S G Q I+G+DD GFL V E+G + +V
Sbjct: 646 RFQDQGPDGVLPLYYKYWVHGGQQVRLGSTEGP--QASIVGLDDSGFLQVHQEDGGVVTV 703
Query: 614 RPDGNTFDMLNGLIAPKQ 631
PDGN+FDML LI PK+
Sbjct: 704 HPDGNSFDMLRNLIVPKR 721
>sp|O14353|BPL1_SCHPO Biotin--protein ligase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=bpl1 PE=3 SV=1
Length = 631
Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 156/309 (50%), Gaps = 44/309 (14%)
Query: 358 LVNEAPSDFNVDEYYRHLNTKKLGQLVIYSGVMSSSHNVLDG-----PTLLHGLTVIPRQ 412
+ +A F+++ Y + +N + G +I + V+ S+ +LD + G TV+
Sbjct: 330 ICKKAKPSFDLELYAKLINGCRFGLPIIVAPVIRSTQTLLDKNYRFLDSTNTGFTVLGNY 389
Query: 413 QTQGTGRSNNIWLSPPGCAMFSMQLHIDLKSQLGKHLPLIQHIVAISIVLAVKSFN---Q 469
QT G GR N+W+SP G FS +++D K+ + L Q+++A+++V ++ + +
Sbjct: 390 QTAGRGRGQNMWVSPYGTLAFSFIINVDAKNFSTTPIALFQYLMALAVVRGIREYAPGYE 449
Query: 470 DIDLGIKWPNDLYVNGN-----------VKLGGIIVTSSILSTFESQMAVCNIGVGMNLD 518
+I IKWPND+YV + +KL GIIVTS+ + + +G G+N+
Sbjct: 450 NIPAFIKWPNDVYVRVDKGGINFQGKQYMKLSGIIVTSN----YRKNVLHLVVGCGINVS 505
Query: 519 NSQPTTCLNSIF------SANPSSPLLSYEQYFALVFNHLEQ----LMEGDFDEIYDLYY 568
N PT LN++ S NP S+E+ A V N ++ L+E F I YY
Sbjct: 506 NLGPTVSLNTLVDEWNKNSDNPRLEKFSFEKLLASVLNQFDRYHRLLLEEGFSLILPEYY 565
Query: 569 KHWLHNNVNVTVVSERGEAQQVKIIGI-DDFGF-----LNVRSEEGY-IFSVRPDGNTFD 621
++WLH+N V + S + I GI DFGF LN +E + ++PDGN+FD
Sbjct: 566 QYWLHSNQTVNLAS----GGKAIIQGITSDFGFLLAQLLNENNEPTTKVVHLQPDGNSFD 621
Query: 622 MLNGLIAPK 630
++ LI K
Sbjct: 622 LMRNLITRK 630
>sp|Q9VAI0|GNA1_DROME Probable glucosamine 6-phosphate N-acetyltransferase OS=Drosophila
melanogaster GN=CG1969 PE=2 SV=1
Length = 219
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 70/90 (77%)
Query: 8 NVFHFAERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDD 67
N F RF +MKAS DY VTVIEDTR ++IG SL++E+KFIH CA++G++E+VVV+D
Sbjct: 70 NRTQFLTRFSQMKASGDYFVTVIEDTRKNEIIGAASLVIERKFIHNCAVRGRLEDVVVND 129
Query: 68 TYRGKELGKLLIAVLVKLAKHFQCYKLTLD 97
TYRGK+LGKL++ + LA+ CYK++LD
Sbjct: 130 TYRGKQLGKLIVVTVSLLAEELGCYKMSLD 159
>sp|P48445|BPL1_YEAST Biotin--protein ligase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=BPL1 PE=1 SV=1
Length = 690
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 156/330 (47%), Gaps = 70/330 (21%)
Query: 365 DFNVDEYYRHLNTKK-LGQLVIYSGVMSSSHNVLDG----------PTLLHGLTVIPRQQ 413
+F++ EY+++LN + +G L++Y V++S+ +L+ TLLH T+ Q
Sbjct: 364 NFDMKEYFKYLNVQNTIGSLLLYGEVVTSTSTILNNNKSLLSSIPESTLLHVGTI----Q 419
Query: 414 TQGTGRSNNIWLSPPGCAMFSMQLHIDLKSQLGKH---LPLIQHIVAISIVLAVKSFN-- 468
G GR N W++P G + + + L+S + + +Q++ ++ A+ S+
Sbjct: 420 VSGRGRGGNTWINPKGVCASTAVVTMPLQSPVTNRNISVVFVQYLSMLAYCKAILSYAPG 479
Query: 469 -QDIDLGIKWPNDLY--------------VN----------GNVKLGGIIVTSSILST-F 502
DI + IKWPNDLY VN G+++ + ++ +++T F
Sbjct: 480 FSDIPVRIKWPNDLYALSPTYYKRKNLKLVNTGFEHTKLPLGDIEPAYLKISGLLVNTHF 539
Query: 503 ESQMAVCNIGVGMNLDNSQPTTCLNS---IFSANPSS------PLLSYEQYFALVFNHLE 553
+ +G G+NL + PTT L + I + P + E+ AL N+LE
Sbjct: 540 INNKYCLLLGCGINLTSDGPTTSLQTWIDILNEERQQLHLDLLPAIKAEKLQALYMNNLE 599
Query: 554 ----QLMEGDFDEIYDLYYKHWLHNNVNVTVVSERGEAQQVKIIGI-DDFGFLNVRSE-- 606
Q + EI YY+ WLH+N VT + + G Q + I GI +D+G L +
Sbjct: 600 VILKQFINYGAAEILPSYYELWLHSNQIVT-LPDHGNTQAM-ITGITEDYGLLIAKELVS 657
Query: 607 ------EGYIFSVRPDGNTFDMLNGLIAPK 630
G +++++PDGNTFD+ LIA K
Sbjct: 658 GSSTQFTGNVYNLQPDGNTFDIFKSLIAKK 687
Score = 33.9 bits (76), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 79/150 (52%), Gaps = 14/150 (9%)
Query: 187 DFNVDEYYRHLNTKK-LGQLVIYSGVMSSSHNVLVSSQTSVSTLVGSSAIFIFLMVIRSQ 245
+F++ EY+++LN + +G L++Y V++S+ +L ++++ +S++ S+ + + + + +
Sbjct: 364 NFDMKEYFKYLNVQNTIGSLLLYGEVVTSTSTILNNNKSLLSSIPESTLLHVGTIQVSGR 423
Query: 246 VLKMVYTAGYLIGHPE---AKTKLLDTA-RKLYTKKTQSVVQMKKME-LEFCQSAASRAP 300
G +P+ A T ++ + T + SVV ++ + L +C++ S AP
Sbjct: 424 G-----RGGNTWINPKGVCASTAVVTMPLQSPVTNRNISVVFVQYLSMLAYCKAILSYAP 478
Query: 301 SEAYMPILVNEAPSDFNV--DEYYRHLNTK 328
+ +P+ + + P+D YY+ N K
Sbjct: 479 GFSDIPVRI-KWPNDLYALSPTYYKRKNLK 507
>sp|Q5RAL9|GNA1_PONAB Glucosamine 6-phosphate N-acetyltransferase OS=Pongo abelii
GN=GNPNAT1 PE=2 SV=2
Length = 184
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 61/87 (70%)
Query: 11 HFAERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYR 70
F + F MK S DY VTV+ED Q++ T +LI+E KFIH CA +G++E+VVV D R
Sbjct: 70 QFMKSFEHMKKSGDYYVTVVEDVTLGQIVATATLIIEHKFIHSCAKRGRVEDVVVSDECR 129
Query: 71 GKELGKLLIAVLVKLAKHFQCYKLTLD 97
GK+LGKLL++ L L+K CYK+TL+
Sbjct: 130 GKQLGKLLLSTLTLLSKKLNCYKITLE 156
>sp|Q96EK6|GNA1_HUMAN Glucosamine 6-phosphate N-acetyltransferase OS=Homo sapiens
GN=GNPNAT1 PE=1 SV=1
Length = 184
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 61/87 (70%)
Query: 11 HFAERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYR 70
F + F MK S DY VTV+ED Q++ T +LI+E KFIH CA +G++E+VVV D R
Sbjct: 70 QFMKSFEHMKKSGDYYVTVVEDVTLGQIVATATLIIEHKFIHSCAKRGRVEDVVVSDECR 129
Query: 71 GKELGKLLIAVLVKLAKHFQCYKLTLD 97
GK+LGKLL++ L L+K CYK+TL+
Sbjct: 130 GKQLGKLLLSTLTLLSKKLNCYKITLE 156
>sp|Q9JK38|GNA1_MOUSE Glucosamine 6-phosphate N-acetyltransferase OS=Mus musculus
GN=Gnpnat1 PE=2 SV=1
Length = 184
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 61/87 (70%)
Query: 11 HFAERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYR 70
F + F MK S DY VTV+ED Q++ T +LI+E KFIH CA +G++E+VVV D R
Sbjct: 70 QFMKSFEHMKKSGDYYVTVVEDVTLGQIVATATLIIEHKFIHSCAKRGRVEDVVVSDECR 129
Query: 71 GKELGKLLIAVLVKLAKHFQCYKLTLD 97
GK+LGKLL++ L L+K CYK+TL+
Sbjct: 130 GKQLGKLLLSTLTLLSKKLNCYKITLE 156
>sp|Q9LFU9|GNA1_ARATH Glucosamine 6-phosphate N-acetyltransferase OS=Arabidopsis thaliana
GN=GNA1 PE=1 SV=1
Length = 149
Score = 76.6 bits (187), Expect = 6e-13, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 12 FAERFHRMKA-SQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYR 70
F RF +++ D+++ VIE+ + ++ TGS+++E+KF+ C G IE+VVVD +R
Sbjct: 37 FDRRFEEIRSYGDDHVICVIEEETSGKIAATGSVMIEKKFLRNCGKAGHIEDVVVDSRFR 96
Query: 71 GKELGKLLIAVLVKLAKHFQCYKLTLDFS 99
GK+LGK ++ L+ K CYK+ LD S
Sbjct: 97 GKQLGKKVVEFLMDHCKSMGCYKVILDCS 125
>sp|Q17427|GNA1_CAEEL Glucosamine 6-phosphate N-acetyltransferase OS=Caenorhabditis
elegans GN=gna-1 PE=1 SV=1
Length = 165
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 12 FAERFHRMKAS-QDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYR 70
F +RF M+ S +Y + VIED+ +++V+ + SL++E KFIH +G++E+VVVD R
Sbjct: 54 FEKRFEAMRTSVPNYHIVVIEDSNSQKVVASASLVVEMKFIHGAGSRGRVEDVVVDTEMR 113
Query: 71 GKELGKLLIAVLVKLAKHFQCYKLTLD 97
++LG +L+ LV L K YK++L+
Sbjct: 114 RQKLGAVLLKTLVSLGKSLGVYKISLE 140
>sp|Q54WR8|GNA1_DICDI Glucosamine 6-phosphate N-acetyltransferase 1 OS=Dictyostelium
discoideum GN=gna1 PE=3 SV=1
Length = 157
Score = 73.9 bits (180), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 11 HFAERFHRMKASQD-YLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTY 69
F ERF+++K D Y + V D + ++I GSL +E+KFI C G IE++VV++ Y
Sbjct: 39 QFIERFNQIKKQSDTYFLIVAVDVKLNKIIACGSLFVEKKFIRNCGKCGHIEDIVVNNNY 98
Query: 70 RGKELGKLLIAVLVKLAKHFQCYKLTLDFS 99
RGK LG +I L + CYK+ LD S
Sbjct: 99 RGKNLGLRIIEQLKCIGSQAGCYKIILDCS 128
>sp|P43577|GNA1_YEAST Glucosamine 6-phosphate N-acetyltransferase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=GNA1 PE=1
SV=1
Length = 159
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 47/69 (68%)
Query: 29 VIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGKELGKLLIAVLVKLAKH 88
VI D RT+ V TG++I+E+K IHE L G IE++ V+ Y+G+ LGKLLI LV +
Sbjct: 66 VIVDKRTETVAATGNIIIERKIIHELGLCGHIEDIAVNSKYQGQGLGKLLIDQLVTIGFD 125
Query: 89 FQCYKLTLD 97
+ CYK+ LD
Sbjct: 126 YGCYKIILD 134
>sp|E0U174|BIRA_BACPZ Bifunctional protein BirA OS=Bacillus subtilis subsp. spizizenii
(strain ATCC 23059 / NRRL B-14472 / W23) GN=birA PE=3
SV=1
Length = 325
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 109/259 (42%), Gaps = 23/259 (8%)
Query: 363 PSDFNVDEYYRHLNTKKLGQLVIYSGVMSSSHNV---LDGPTLLHGLTVIPRQQTQGTGR 419
P + E L T+ +GQ +IY V+SS+ L G V+ +QT G GR
Sbjct: 65 PGKLSESEIRFGLKTEVMGQHLIYQDVISSTQKTAHELANNNAPEGTLVVADKQTAGRGR 124
Query: 420 SNNIWLSPPGCAMF-SMQLHIDLKSQLGKHLPLIQHIVAISIVLAVKSFNQDIDLGIKWP 478
+ +W S G ++ S+ L D+ Q L L+ + + + A DI KWP
Sbjct: 125 MSRVWHSQEGNGIWMSLILRPDIPLQKTPQLTLLAAVAVVQGIEAAAGIQTDI----KWP 180
Query: 479 NDLYVNGNVKLGGIIVTSSILSTFESQMAVCNIGVGMNLDNSQPTTCLNSIFSANPSSPL 538
ND+ +NG +G I+T + E ++ IG+G+N+ N Q + + S
Sbjct: 181 NDILINGKKTVG--ILTE--MQAEEDRVRSVIIGIGINV-NQQSDDFPDELKDIATSLSQ 235
Query: 539 LSYE--------QYFALVFN-HLEQLMEGDFDEIYDLYYKHWLHNNVNVTVVSERGEAQQ 589
S E Q+ L F M F I L+ + L N+ + G
Sbjct: 236 ASGEKIDRAGVIQHILLCFEKRYRDYMTHGFTPIKLLWESYALGIGTNMRARTLNGTFYG 295
Query: 590 VKIIGIDDFGFLNVRSEEG 608
K +GIDD G L + ++EG
Sbjct: 296 -KALGIDDEGVLLLETQEG 313
>sp|P0CI75|BIRA_BACSU Bifunctional protein BirA OS=Bacillus subtilis (strain 168) GN=birA
PE=1 SV=1
Length = 325
Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 112/259 (43%), Gaps = 23/259 (8%)
Query: 363 PSDFNVDEYYRHLNTKKLGQLVIYSGVMSSSHNV---LDGPTLLHGLTVIPRQQTQGTGR 419
P + E L T+ +GQ +IY V+SS+ L G V+ +QT G GR
Sbjct: 65 PGKLSESEIRFGLKTEVMGQHLIYHDVLSSTQKTAHELANNNAPEGTLVVADKQTAGRGR 124
Query: 420 SNNIWLSPPGCAMF-SMQLHIDLKSQLGKHLPLIQHIVAISIVLAVKSFNQDIDLGIKWP 478
+ +W S G ++ S+ L D+ Q P + + A+++V ++ I IKWP
Sbjct: 125 MSRVWHSQEGNGVWMSLILRPDIPLQ---KTPQLTLLAAVAVVQGIEEA-AGIQTDIKWP 180
Query: 479 NDLYVNGNVKLGGIIVTSSILSTFESQMAVCNIGVGMNLDNSQPTTCLNSIFSANPSSPL 538
ND+ +NG +G I+T + E ++ IG+G+N+ N QP + + S
Sbjct: 181 NDILINGKKTVG--ILTE--MQAEEDRVRSVIIGIGINV-NQQPNDFPDELKDIATSLSQ 235
Query: 539 LSYE--------QYFALVFN-HLEQLMEGDFDEIYDLYYKHWLHNNVNVTVVSERGEAQQ 589
+ E Q+ L F M F I L+ + L N+ + G
Sbjct: 236 AAGEKIDRAGVIQHILLCFEKRYRDYMTHGFTPIKLLWESYALGIGTNMRARTLNGTFYG 295
Query: 590 VKIIGIDDFGFLNVRSEEG 608
K +GIDD G L + + EG
Sbjct: 296 -KALGIDDEGVLLLETNEG 313
>sp|Q5U9F2|GNA1_ORYSJ Glucosamine 6-phosphate N-acetyltransferase 1 OS=Oryza sativa
subsp. japonica GN=GNA1 PE=1 SV=1
Length = 165
Score = 65.5 bits (158), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 12 FAERFHRMKA-SQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYR 70
F RF + A D+LV V ED T ++ G++++E+KFI C G +E+VVVD R
Sbjct: 54 FRARFEELAALGADHLVLVAEDAATGRLAAAGAVLVERKFIRRCGRVGHVEDVVVDAAAR 113
Query: 71 GKELGKLLIAVLVKLAKHFQCYKLTLD 97
G+ LG+ ++ LV+ A+ CYK+ ++
Sbjct: 114 GRGLGERVVRRLVEHARGRGCYKVIIN 140
>sp|O13738|GNA1_SCHPO Glucosamine 6-phosphate N-acetyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=gna1 PE=3 SV=1
Length = 111
Score = 64.7 bits (156), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 47/75 (62%)
Query: 25 YLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGKELGKLLIAVLVK 84
Y + V+ED + VIGT +L LE+KF+ + G IEEV+V ++ K +GKL++ L+K
Sbjct: 9 YYIIVVEDLESHHVIGTATLFLERKFLRGKGICGHIEEVIVHPDHQRKAIGKLMVLTLIK 68
Query: 85 LAKHFQCYKLTLDFS 99
LA YK+ LD S
Sbjct: 69 LAFSLNSYKVILDCS 83
>sp|Q5UPZ9|GNA1_MIMIV Probable glucosamine 6-phosphate N-acetyltransferase
OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L316 PE=3
SV=1
Length = 148
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 37 QVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLTL 96
+++G+ ++++E KFIH + G IE+VVVD YR +GKLLI + + + +CYK+ L
Sbjct: 60 KIVGSTTVLIEPKFIHNLSSVGHIEDVVVDQNYRLHGIGKLLIVKAIDICRQERCYKIIL 119
Query: 97 DFSFYTC 103
D S C
Sbjct: 120 DCSDKVC 126
>sp|C7IZ16|GNA2_ORYSJ Probable glucosamine 6-phosphate N-acetyltransferase 2 OS=Oryza
sativa subsp. japonica GN=Os02g0717700 PE=2 SV=2
Length = 166
Score = 58.9 bits (141), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 1 MSKLPTSNVFHFAERFHRMKA-SQDYLVTVIEDTRTKQ--VIGTGSLILEQKFIHECALK 57
+S P FA F + A D+++ V ED + ++ TG L +E+KF+
Sbjct: 42 LSACPDLTASEFAACFADLAALGDDHVILVAEDPAAPESRILATGCLFVERKFLRGGGKV 101
Query: 58 GKIEEVVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLTLD 97
G +E+VVVD RG+ LG ++ LV++AK CYK+ LD
Sbjct: 102 GHVEDVVVDAAARGRGLGLRVVRRLVEIAKEAGCYKVILD 141
>sp|O93806|GNA1_CANAX Glucosamine 6-phosphate N-acetyltransferase OS=Candida albicans
GN=GNA1 PE=3 SV=1
Length = 149
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 38 VIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLTLD 97
V+ TG L +E+K IHEC G IE++ V + +GK+LG L+ L K+A+ CYK+ LD
Sbjct: 65 VVATGMLFVEKKLIHECGKVGHIEDISVAKSEQGKKLGYYLVTSLTKVAQENDCYKVILD 124
Query: 98 FS 99
S
Sbjct: 125 CS 126
>sp|P46363|BIRA_HAEIN Bifunctional protein BirA OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=birA PE=3 SV=1
Length = 302
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 110/251 (43%), Gaps = 41/251 (16%)
Query: 386 YSGVMSSSH-----NVLDGPTLLHGLTVIPRQQTQGTGRSNNIWLSP-PGCAMFSMQLHI 439
Y ++SS++ N+L +L G + QT G GR WLSP G MFS
Sbjct: 74 YQPIISSTNEWILQNIL---SLKKGDLCVAEYQTAGRGRRGRQWLSPFAGQIMFSFYWAF 130
Query: 440 DLKSQLGKHLPLIQHIVAISIVLAVKSFNQDIDLGIKWPNDLYVNGNVKLGGIIVTSSIL 499
D K + I +S+V+ + + + +++ +KWPND+ + KLGGI+V +
Sbjct: 131 DPK----------KSIEGLSLVIGL-AIAEVLNVQVKWPNDILFDER-KLGGILVE---I 175
Query: 500 STFESQMAVCNIGVGMNLDNSQPTTCLNSIFSANPSSPLLSYEQYFALVFNHLEQLM--- 556
+ ++ M IG+G+N+ S+ T P + + + HL +
Sbjct: 176 ANHKNGMLNLVIGIGINVSLSKQTEISQPYAEVCEIDPDVERQTLLPKLIQHLYTRLNIF 235
Query: 557 -EGDFDEIYDLYYKHW-LHNNVNVTVVSERGEAQQVKIIGIDDFGFLNVRSEEGYIFSVR 614
+ DE + ++ + +N + V++E+G ++ GID+ G+L V
Sbjct: 236 EQNGIDEEFQQAWQSYNAFSNSEINVLTEQGVISGIE-QGIDERGYLKVLC--------- 285
Query: 615 PDGNTFDMLNG 625
GN M NG
Sbjct: 286 --GNKIQMFNG 294
>sp|Q5F5C8|BICOA_NEIG1 Bifunctional enzyme BirA/CoaX OS=Neisseria gonorrhoeae (strain ATCC
700825 / FA 1090) GN=birA/coaX PE=3 SV=1
Length = 592
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 112/281 (39%), Gaps = 34/281 (12%)
Query: 370 EYYRHLNTKKLGQLVIYSGVMSSSHNVLD----GPTLLHGLTVIPRQQTQGTGRSNNIWL 425
E R L + Q + SS+ +L+ P H + Q++G GR W
Sbjct: 71 EGLRDLGERSGFQTALKHECASSNDEILELARIAPDKAHKTICVTHLQSKGRGRQGRKWS 130
Query: 426 SPPG-CAMFSMQLHIDLKS-QLGKHLPLIQHIVAISIVLAVKSFNQDIDLGIKWPNDLYV 483
G C MFS D +LG P + A++ A+ ++ IKWPNDL V
Sbjct: 131 HRLGECLMFSFGWAFDRPQYELGSLSP----VAALACRRALGCLG--LETQIKWPNDLVV 184
Query: 484 NGNVKLGGIIVTSSILSTFESQMAVCNIGVGMNLDNS-QPTTCLNSIFS-----ANPSSP 537
G KLGGI++ + + +AV IG+ L + + S+F N +
Sbjct: 185 -GRDKLGGILIET--VRAGGKTVAVVGIGINFVLPKEVENAASVQSLFQTASRRGNADAA 241
Query: 538 LLSYEQYFALVFNHLEQLMEGDFDEIYDLYYKHWLHNNVNVTVVSERGEAQQVKIIGIDD 597
+L E A + LEQ E F + Y + V ++ + + + G+D
Sbjct: 242 VL-LETLLAELGAVLEQYAEEGFAPFLNEYETANRDHGKAVLLLRDGETVCEGTVKGVDG 300
Query: 598 FGFLNVRSEEGYI------FSVRPDGNTFDMLNGLIAPKQP 632
G L++ + EG S+RPD + + PK+P
Sbjct: 301 RGVLHLETAEGEQTVVSGEISLRPDNRSVSV------PKRP 335
>sp|Q9JXF1|BICOA_NEIMB Bifunctional enzyme BirA/CoaX OS=Neisseria meningitidis serogroup B
(strain MC58) GN=birA/coaX PE=3 SV=1
Length = 592
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 66/150 (44%), Gaps = 15/150 (10%)
Query: 370 EYYRHLNTKKLGQLVIYSGVMSSSHNVLD----GPTLLHGLTVIPRQQTQGTGRSNNIWL 425
E R L + Q + SS+ +L+ P H + Q++G GR W
Sbjct: 71 EGLRELGERSGFQTALKHECASSNDEILELARIAPDKAHKTICVTHLQSKGRGRQGRKWS 130
Query: 426 SPPG-CAMFSMQLHIDL-KSQLGKHLPLIQHIVAISIVLAVKSFNQDIDLGIKWPNDLYV 483
G C MFS D + +LG P + A++ A+ D+ IKWPNDL V
Sbjct: 131 HRLGECLMFSFGWVFDRPQYELGSLSP----VAAVACRRALSRLGLDVQ--IKWPNDLVV 184
Query: 484 NGNVKLGGIIVTSSILSTFESQMAVCNIGV 513
G KLGGI++ + + T +AV IG+
Sbjct: 185 -GRDKLGGILIET--VRTGGKTVAVVGIGI 211
>sp|Q59014|BPL_METJA Putative biotin ligase OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=MJ1619 PE=1 SV=1
Length = 237
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 17/115 (14%)
Query: 408 VIPRQQTQGTGRSNNIWLSPPGCAMFSMQLHIDLKSQLGKHLPLIQHIVAISIVLAVKSF 467
V+ +Q G GR +W S G FSM L L + +I +V I I+ +K++
Sbjct: 29 VLADKQNNGKGRWGRVWYSDEGGLYFSMVLDSKLYNP-----KVINLLVPICIIEVLKNY 83
Query: 468 NQDIDLGIKWPNDLYVNGN---VKLGGIIVTSSILSTFESQMAVCNIGVGMNLDN 519
D +LG+K+PND+ V N KLGG IL+ + IG+G+N++N
Sbjct: 84 -VDKELGLKFPNDIMVKVNDNYKKLGG------ILTELTDDYMI--IGIGINVNN 129
>sp|Q9JWI7|BICOA_NEIMA Bifunctional enzyme BirA/CoaX OS=Neisseria meningitidis serogroup A
/ serotype 4A (strain Z2491) GN=birA/coaX PE=3 SV=1
Length = 592
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 64/150 (42%), Gaps = 15/150 (10%)
Query: 370 EYYRHLNTKKLGQLVIYSGVMSSSHNVLD----GPTLLHGLTVIPRQQTQGTGRSNNIWL 425
E R L + Q + SS+ +L+ P H + Q++G GR W
Sbjct: 71 EGLRELGERSGFQTALKHECASSNDEILELARIAPDKAHKTICVTHLQSKGRGRQGRKWS 130
Query: 426 SPPG-CAMFSMQLHIDLKS-QLGKHLPLIQHIVAISIVLAVKSFNQDIDLGIKWPNDLYV 483
G C MFS D +LG P + A++ A+ + IKWPNDL V
Sbjct: 131 HRLGECLMFSFGWVFDRPQYELGSLSP----VAAVACRRALSRLG--LKTQIKWPNDLVV 184
Query: 484 NGNVKLGGIIVTSSILSTFESQMAVCNIGV 513
G KLGGI++ + + T +AV IG+
Sbjct: 185 -GRDKLGGILIET--VRTGGKTVAVVGIGI 211
>sp|P29906|BIRA_PARDE Biotin--[acetyl-CoA-carboxylase] synthetase OS=Paracoccus
denitrificans GN=birA PE=3 SV=1
Length = 240
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 24/222 (10%)
Query: 400 PTLLHGLTVIPRQQTQGTGRSNNIWLSPPGCAMFSMQLHIDLKSQLGKHLPLIQHIVAIS 459
P L V+ R+Q G GR W+ P G ++ L + L + A++
Sbjct: 17 PGLSGSAWVLAREQFAGRGRRGREWVMPAGNFAGTLVLRPQGGALAAAQL---SFVAALA 73
Query: 460 IVLAVK-SFNQDIDLGIKWPNDLYVNGNVKLGGIIVTSSILSTFESQMAVCNIGVGMNLD 518
+ A+ + L IKWPND+ +NG K+ GI++ SS + AV +G+G+NL
Sbjct: 74 LYDALGLACGPAARLAIKWPNDVLLNGG-KVAGILLESS--GSGPGVQAVA-VGIGVNLA 129
Query: 519 NSQPTTCLNSIFSANP-------SSPLLSYEQYFALV---FNHLE-QLMEGDFDEIYDLY 567
+ + A P + + E++ L+ F + QL F I + +
Sbjct: 130 GAPDAGAVEP--GATPPVSVQGETGHAVDPEEFLDLLAPAFARWQAQLDTYGFAPIRNAW 187
Query: 568 YKHWLHNNVNVTVVSERGEAQQVKII-GIDDFGFLNVRSEEG 608
+ +++ G A+ I GIDD G L +R G
Sbjct: 188 LAR--AARLGEPIIARTGTAESHGIFEGIDDSGALILRGPAG 227
>sp|P06709|BIRA_ECOLI Bifunctional protein BirA OS=Escherichia coli (strain K12) GN=birA
PE=1 SV=1
Length = 321
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 20/162 (12%)
Query: 366 FNVDEYYRHLNTKK-LGQL-----VIYSGVMSSSHNVLDG-PTLLHGLTVIPRQQTQGTG 418
+++ E + LN K+ LGQL + + S++ +LD L G I Q G G
Sbjct: 58 YSLPEPIQLLNAKQILGQLDGGSVAVLPVIDSTNQYLLDRIGELKSGDACIAEYQQAGRG 117
Query: 419 RSNNIWLSPPGCAMF-SMQLHIDLKSQLGKHLPLIQHIVAISIVLA--VKSFNQDIDLGI 475
R W SP G ++ SM ++ L L+ I IV+A ++ D + +
Sbjct: 118 RRGRKWFSPFGANLYLSMFWRLEQGPAAAIGLSLV-----IGIVMAEVLRKLGAD-KVRV 171
Query: 476 KWPNDLYVNGNVKLGGIIVTSSILSTFESQMAVCNIGVGMNL 517
KWPNDLY+ + KL GI+V L+ A IG G+N+
Sbjct: 172 KWPNDLYLQ-DRKLAGILVE---LTGKTGDAAQIVIGAGINM 209
>sp|P37416|BIRA_SALTY Bifunctional protein BirA OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=birA PE=3 SV=2
Length = 320
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 17/156 (10%)
Query: 366 FNVDEYYRHLNTKKLGQLVIYSGVMSSSHNVLDG-PTLLHGLTVIPRQQTQGTGRSNNIW 424
+ D + L++ G + + + S++ +LD L G + Q G GR W
Sbjct: 67 LDADRIHSQLDS---GNVAVLPVIDSTNQYLLDRIGELRSGDACVAEYQQAGRGRRGRKW 123
Query: 425 LSPPGCAMF-SMQLHIDLKSQLGKHLPLIQHIVAISIVLA--VKSFNQDIDLGIKWPNDL 481
SP G ++ SM ++ L L+ I IV+A ++ D + +KWPNDL
Sbjct: 124 FSPFGANLYLSMYWRLEQGPAAAIGLSLV-----IGIVMAEVLRKLGAD-KVRVKWPNDL 177
Query: 482 YVNGNVKLGGIIVTSSILSTFESQMAVCNIGVGMNL 517
Y+ + KL GI+V L+ A IG G+N+
Sbjct: 178 YLL-DRKLAGILVE---LTGKTGDAAQIVIGAGINM 209
>sp|Q7TSH2|KPBB_MOUSE Phosphorylase b kinase regulatory subunit beta OS=Mus musculus
GN=Phkb PE=1 SV=1
Length = 1085
Score = 37.0 bits (84), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 519 NSQPTTCLNSIFSANPSSPLLSYEQYFALVFN 550
+ +PTTCL+S+FS + LLSYE+Y L N
Sbjct: 134 DPRPTTCLHSVFSVHTGDELLSYEEYGHLQIN 165
>sp|Q93100|KPBB_HUMAN Phosphorylase b kinase regulatory subunit beta OS=Homo sapiens
GN=PHKB PE=1 SV=3
Length = 1093
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 519 NSQPTTCLNSIFSANPSSPLLSYEQYFALVFN 550
+ +PTTCL+S+F+ + LLSYE+Y L N
Sbjct: 142 DPRPTTCLHSVFNVHTGDELLSYEEYGHLQIN 173
>sp|Q54MP9|NAA30_DICDI N-alpha-acetyltransferase 30 OS=Dictyostelium discoideum
GN=DDB_G0285803 PE=3 SV=1
Length = 185
Score = 35.4 bits (80), Expect = 1.4, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 37 QVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLTL 96
Q+IG +I+ +K H+ +G I +VVD T+R +++G LI + ++ +C ++ L
Sbjct: 81 QLIG---VIISKKQTHKLLERGYIGMIVVDKTFRRQKIGSTLIKLTIEKMIEMKCDEVVL 137
Query: 97 DFSFYTCWKLS-YIFLMVIRSQVLKMVYTAG 126
+ F +S Y L R + L YT G
Sbjct: 138 ETIFTNIQAISLYENLGFTRIKRLFRYYTMG 168
>sp|Q92ZA4|PHK2_RHIME Probable phosphoketolase 2 OS=Rhizobium meliloti (strain 1021)
GN=RA0587 PE=3 SV=2
Length = 779
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 7/130 (5%)
Query: 190 VDEYYRHLNTKKLGQLVIYSGVMSSSHNVLVSSQTSVSTLVGSSAIFIFLMV-----IRS 244
+D Y+R N +GQ+ + + L + + G++ FL V I++
Sbjct: 1 MDAYWRAANYLSVGQIYLRDNPLLKQKLTLADVKPRLLGHWGTTPGLNFLYVHLNRLIQT 60
Query: 245 QVLKMVYTAGYLIGHPE--AKTKLLDTARKLYTKKTQSVVQMKKMELEFCQSAASRAPSE 302
L M+Y G G P A T L T +LY + +Q +K++ +F +
Sbjct: 61 HDLNMIYVTGPGHGGPGLVANTYLEGTYSELYPEVSQDEAGIKRLFTQFSYPGGIPSHVA 120
Query: 303 AYMPILVNEA 312
A +P +NE
Sbjct: 121 AEVPGSINEG 130
>sp|P12798|KPBB_RABIT Phosphorylase b kinase regulatory subunit beta OS=Oryctolagus
cuniculus GN=PHKB PE=1 SV=3
Length = 1093
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 519 NSQPTTCLNSIFSANPSSPLLSYEQYFALVFN 550
+ +PTTCL+S+F+ + LLSYE+Y L N
Sbjct: 142 DPRPTTCLHSLFNVHTGDELLSYEEYGHLQIN 173
>sp|Q6BV76|ATM_DEBHA Serine/threonine-protein kinase TEL1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=TEL1 PE=3 SV=3
Length = 2948
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 54/129 (41%), Gaps = 21/129 (16%)
Query: 277 KTQSVVQMKKMELEFCQSAASRAPSEAYMPILVNEAPSDFNVDEYYRHLNTKKLGQLMKK 336
K + V +KK E+E +S SR MP+ +E N YY L + +G+L
Sbjct: 2336 KLEKSVDLKKSEIEELKSHYSR------MPVAADEKK---NAQRYYSKLKAQYIGELSDL 2386
Query: 337 MELEFCQSAASRAPSEAYMPILVNEAPSDFNVDEYY----RHLNTKKLGQLVIYSGVMSS 392
L+ S E Y+ ++ + +D N+D+++ H N L +S
Sbjct: 2387 NSLKGSICEFSDKAVEFYLKSILTDGDNDENLDKFFALWLEHSNKDDLH--------VSI 2438
Query: 393 SHNVLDGPT 401
S NVL P
Sbjct: 2439 SDNVLSLPN 2447
>sp|Q9SA37|CHX1_ARATH Cation/H(+) antiporter 1 OS=Arabidopsis thaliana GN=CHX1 PE=2 SV=1
Length = 785
Score = 34.3 bits (77), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 87/235 (37%), Gaps = 33/235 (14%)
Query: 143 RKLYTKKTQSVVQMKKMELEFCQSAASRAPSEAYMPILVNEA--PSDFNVDEYYRHLNTK 200
RK+ ++ + V M+ M E C + S ++P ++ N E +RH+N K
Sbjct: 522 RKIMVRQVKLVAPMENMHEEICNATEDLRVSIVFLPFHKHQRIDGKTTNDGEVFRHMNRK 581
Query: 201 KLGQLVIYSGVMSSSHNVLVSSQTSVSTLVGSSAIFIFLMVIRSQVLKMVYTAGYLIGHP 260
L Q G+ N+ T L GS ++ + A G P
Sbjct: 582 VLKQAQCSIGIF-VDRNI-----TGFHQLHGSDSV--------------QHVAALFFGGP 621
Query: 261 EAK-----TKLLDTARKLYTKKTQSVVQMKKMELEFCQSAASRAPSEAYMPILV-----N 310
+ + K L +++ Q V K E + A ++ +E ++ I+ N
Sbjct: 622 DDREALSLCKWLTNNSQIHLTVIQFVADDSKTE-KIVGDAVTKENNEVFLEIVSEDQTEN 680
Query: 311 EAPSDFNVDEYYRHLNTKKLGQLMKKMELEFCQSAASRAPSEAYMPILVNEAPSD 365
E F + Y+R + T ++G + K++ R E Y +V + D
Sbjct: 681 ETDRIFLEEFYHRFVTTGQVGFIEKRVSNGMQTLTILREIGEMYSLFVVGKNRGD 735
>sp|Q04681|PMFA_PROMH Major fimbrial subunit OS=Proteus mirabilis (strain HI4320) GN=pmfA
PE=1 SV=1
Length = 184
Score = 32.7 bits (73), Expect = 9.2, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 14/134 (10%)
Query: 278 TQSVVQMKKMELEFCQSAASRAPSEAYMPILVNEAPSDFNVDEYYRHLNTKKLGQLMKKM 337
T+ +Q+K E SA A S + P++V DF+ N +K G + K +
Sbjct: 34 TKGEIQLKG---EIVNSACGLAASSS--PVIV-----DFSEIPTSALANLQKAGNIKKDI 83
Query: 338 ELEFCQSAASRAPSEAYMPILVNEAPSDFNVDEYYRHLNTKKLGQLVIYSGVMSSSHNVL 397
EL+ C + ++ + +Y P +VN D + N G ++ +G + N
Sbjct: 84 ELQDCDTTVAKTATVSYTPSVVNAVNKDL---ASFVSGNASGAGIGLMDAGSKAVKWNTA 140
Query: 398 DGPT-LLHGLTVIP 410
P L++G++ IP
Sbjct: 141 TTPVQLINGVSKIP 154
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 226,056,922
Number of Sequences: 539616
Number of extensions: 9386260
Number of successful extensions: 23167
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 23105
Number of HSP's gapped (non-prelim): 48
length of query: 638
length of database: 191,569,459
effective HSP length: 124
effective length of query: 514
effective length of database: 124,657,075
effective search space: 64073736550
effective search space used: 64073736550
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)