RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy6919
(638 letters)
>2eay_A Biotin [acetyl-COA-carboxylase] ligase; biotin biosynthesis, dimer,
X-RAY diffraction, structural genomics, NPPSFA; 1.95A
{Aquifex aeolicus} PDB: 3efs_A* 3fjp_A 3efr_A*
Length = 233
Score = 121 bits (307), Expect = 1e-31
Identities = 48/219 (21%), Positives = 85/219 (38%), Gaps = 38/219 (17%)
Query: 404 HGLTVIPRQQTQGTGRSNNIWLSPPGCAMFSMQLHIDLKSQLGKHLPLIQHIVAISIVLA 463
+G ++ +QT+G GR WLS G FS L+ L + LPL ++ +S+ A
Sbjct: 25 YGTALVADRQTKGRGRLGRKWLSQEGGLYFSFLLNPKEFENLLQ-LPL---VLGLSVSEA 80
Query: 464 VKSFNQDIDLGIKWPNDLYVNGNVKLGGIIVTSSILSTFESQMAVCNIGVGMNLDNS--- 520
++ +I +KWPND+Y K+ G++ E +G+G+N++
Sbjct: 81 LEEIT-EIPFSLKWPNDVYFQEK-KVSGVLC--------ELSKDKLIVGIGINVNQREIP 130
Query: 521 ----QPTTCLNSIFSANPSSPLLSYEQYFALVFNHLEQL----MEGDFDEIYDLYYKHWL 572
T L I + + V + + E F E L
Sbjct: 131 EEIKDRATTLYEITGKDWDRKEV-----LLKVLKRISENLKKFKEKSFKEFKGKIESKML 185
Query: 573 HNNVNVTVVSER---GEAQQVKIIGIDDFGFLNVRSEEG 608
+ V ++ E G+ +G+ + G + +EEG
Sbjct: 186 YLGEEVKLLGEGKITGKL-----VGLSEKGGALILTEEG 219
>2dxu_A Biotin--[acetyl-COA-carboxylase] ligase; biotin biosynthesis,
dimer, X-RAY diffraction, structural genomics, NPPSFA;
HET: BT5; 1.28A {Pyrococcus horikoshii} PDB: 2dzc_A
2ejg_A* 2e3y_A* 2e41_A* 2e64_A 2ejf_A* 2zgw_A* 1wqw_A*
1wpy_A* 1wq7_A 1wnl_A* 1x01_A* 2dkg_A* 2dth_A* 2dti_A*
2dto_A* 2fyk_A* 2djz_A* 2hni_A 2e10_A ...
Length = 235
Score = 121 bits (306), Expect = 2e-31
Identities = 60/255 (23%), Positives = 104/255 (40%), Gaps = 38/255 (14%)
Query: 375 LNTKKLGQLVIYSGVMSSSHNVLDGPTLLHGLTVIPRQQTQGTGRSNNIWLSPPGCAMFS 434
L T +G+ VIY ++S++ L G ++ +QT G G N W SP G S
Sbjct: 4 LKTSIIGRRVIYFQEITSTNEFAKTSYLEEGTVIVADKQTMGHGALNRKWESPEGGLWLS 63
Query: 435 MQLHIDLKSQLGKHLPLIQHIVAISIVLAVKSFNQDIDLGIKWPNDLYVNGNVKLGGIIV 494
+ L + + + + A+ +V +K F+ ID IKWPND+ VN K+ G++V
Sbjct: 64 IVLSPKVPQKDLPKIVF---LGAVGVVETLKEFS--IDGRIKWPNDVLVNYK-KIAGVLV 117
Query: 495 TSSILSTFESQMAVCNIGVGMNLDNS--QPTTCLNSIFSANPSSPLLSYEQYFALVFNHL 552
E + +G+G+N++N T + + + F + +L
Sbjct: 118 --------EGKGDKIVLGIGLNVNNKVPNGATSMKLELGSEVPLLSV-----FRSLITNL 164
Query: 553 EQ----LMEGDFDEIYDLYYKHWLHNNVNVTVVSE-RGEAQQVKIIGIDDFGFLNVRSEE 607
++ ++ D + + L V + G A IDDFG L +R +
Sbjct: 165 DRLYLNFLKNPMDILNLVRDNMILGVRVKILGDGSFEGIA-----EDIDDFGRLIIRLDS 219
Query: 608 GYIF-------SVRP 615
G + S+R
Sbjct: 220 GEVKKVIYGDVSLRF 234
>2ej9_A Putative biotin ligase; biotin biosynthesis, monomer, X-RAY
diffraction, structural genomics, NPPSFA; HET: BTN;
2.00A {Methanocaldococcus jannaschii}
Length = 237
Score = 114 bits (287), Expect = 6e-29
Identities = 57/233 (24%), Positives = 89/233 (38%), Gaps = 42/233 (18%)
Query: 404 HGLTVIPRQQTQGTGRSNNIWLSPPGCAMFSMQLHIDLKSQLGKHLPLIQHIVAISIVLA 463
V+ +Q G GR +W S G FSM L L + +I +V I I+
Sbjct: 25 RNFIVLADKQNNGKGRWGRVWYSDEGGLYFSMVLDSKL-----YNPKVINLLVPICIIEV 79
Query: 464 VKSFNQDIDLGIKWPNDLYVNGNV---KLGGIIVTSSILSTFESQMAVCNIGVGMNLDNS 520
+K++ D +LG+K+PND+ V N KLGGI+ E IG+G+N++N
Sbjct: 80 LKNYV-DKELGLKFPNDIMVKVNDNYKKLGGILT--------ELTDDYMIIGIGINVNNQ 130
Query: 521 ------QPTTCLNSIFSANPSSPLLSYEQYFALVFNHLEQLM------EGDFDEIYDLYY 568
+ L I + + E + E D EI Y
Sbjct: 131 IRNEIREIAISLKEITGKELDKVEI-----LSNFLKTFESYLEKLKNKEIDDYEILKKYK 185
Query: 569 KHWLHNNVNVTVVSERGEAQQVKIIGIDDFGFLNVRSEEGY-------IFSVR 614
K+ + V ++ E K+ ID G + + +E+G VR
Sbjct: 186 KYSITIGKQVKILLSNNEIITGKVYDIDFDGIV-LGTEKGIERIPSGICIHVR 237
>3rkx_A Biotin-[acetyl-COA-carboxylase] ligase; biotin protein ligase, 3
domains, enzyme DNA binding, biotin coupling domains;
2.10A {Staphylococcus aureus} PDB: 3rir_A* 3rkw_A
3rky_A* 3v7c_A* 3v7s_A* 4dq2_A*
Length = 323
Score = 116 bits (292), Expect = 1e-28
Identities = 47/273 (17%), Positives = 92/273 (33%), Gaps = 38/273 (13%)
Query: 361 EAPSDFNVDEYYRHLNTKKLGQLVIYSGVMSSSHNVL-----DGPTLLHGLTVIPRQQTQ 415
+ P + ++ + L + S+ ++ +QT+
Sbjct: 62 QLPDIWYQGIIDQYTKSSALFDFSEVYDSIDSTQLAAKKSLVGNQ---SSFFILSDEQTK 118
Query: 416 GTGRSNNIWLSPPGCA-MFSMQLHIDLKSQLGKHLPLIQHIVAISIVLAVKSFNQDIDLG 474
G GR N W S G S+ L ++ + L +A+ I A++ F+ ++
Sbjct: 119 GRGRFNRHWSSSKGQGLWMSVVLRPNVAFSMISKFNLF---IALGIRDAIQHFS-QDEVK 174
Query: 475 IKWPNDLYVNGNVKLGGIIVTSSILSTFESQMAVCNIGVGMNLDNS---------QPTTC 525
+KWPND+Y++ K+ G + + + G+G+NL T
Sbjct: 175 VKWPNDIYIDNG-KVCGFLTEMVANN---DGIEAIICGIGINLTQQLENFDESIRHRATS 230
Query: 526 LNSIFSANPS-SPLLSYEQYFALVFNHLEQ----LMEGDFDEIYDLYYKHWLHNNVNVTV 580
+ L + +E+ + F EI + Y N +
Sbjct: 231 IQLHDKNKLDRYQFL------ERLLQEIEKRYNQFLTLPFSEIREEYNAASNIWNRTLLF 284
Query: 581 VSERGEAQQVKIIGIDDFGFLNVRSEEGYIFSV 613
+ + + I +D G+L VR E G +
Sbjct: 285 TENDKQ-FKGQAIDLDYDGYLIVRDEAGESHRL 316
>3rux_A BIRA bifunctional protein; biotin-protein ligase, ligase-ligase
inhibitor complex; HET: BS5; 1.70A {Mycobacterium
tuberculosis} PDB: 3l1a_A 3l2z_A 2cgh_A
Length = 270
Score = 106 bits (266), Expect = 9e-26
Identities = 42/216 (19%), Positives = 73/216 (33%), Gaps = 27/216 (12%)
Query: 404 HGLTVIPRQQTQGTGRSNNIWLSPPGCAM-FSMQLHIDLKSQLGKHLPLIQHIVAISIVL 462
G+ +I QT G GR W + + S+ + + + + ++++
Sbjct: 58 DGVVLIAEHQTAGRGRHGRGWAATARAQIILSVGVRVVDVPV--QAWGWLSLAAGLAVLD 115
Query: 463 AVKSFN--QDIDLGIKWPNDLYVNGNVKLGGIIVTSSILSTFESQMAVCNIGVGMNLDNS 520
+V + G+KWPND+ G KL GI+ E +GVG+N+ +
Sbjct: 116 SVAPLIAVPPAETGLKWPNDVLARGG-KLAGILA--------EVAQPFVVLGVGLNVTQA 166
Query: 521 -----QPTTCLNSIFSANPSSPLLSYEQYFALVFNHLEQLM---EGDFDEIYDLYYKHWL 572
T L + A P + + + LE + ++ Y L
Sbjct: 167 PEEVDPDATSLLDLGVAAPDRNRI-----ASRLLRELEARIIQWRNANPQLAADYRARSL 221
Query: 573 HNNVNVTVVSERGEAQQVKIIGIDDFGFLNVRSEEG 608
V V G+ IDD G L +
Sbjct: 222 TIGSRVRVELPGGQDVVGIARDIDDQGRLCLDVGGR 257
>1bia_A BIRA bifunctional protein; transcription regulation; 2.30A
{Escherichia coli} SCOP: a.4.5.1 b.34.1.1 d.104.1.2 PDB:
1bib_A* 1hxd_A* 2ewn_A*
Length = 321
Score = 106 bits (266), Expect = 2e-25
Identities = 48/231 (20%), Positives = 73/231 (31%), Gaps = 34/231 (14%)
Query: 404 HGLTVIPRQQTQGTGRSNNIWLSPPGCA-MFSMQLHIDLKSQLGKHLPLIQHIVAISIVL 462
G I Q G GR W SP G SM ++ L L+ + I +
Sbjct: 103 SGDACIAEYQQAGRGRRGRKWFSPFGANLYLSMFWRLEQGPAAAIGLSLV---IGIVMAE 159
Query: 463 AVKSFNQDIDLGIKWPNDLYVNGNVKLGGIIVTSSILSTFESQMAVCNIGVGMNLDNS-- 520
++ + +KWPNDLY+ KL GI+V + + A IG G+N+
Sbjct: 160 VLRKLG-ADKVRVKWPNDLYLQDR-KLAGILVELTGKT---GDAAQIVIGAGINMAMRRV 214
Query: 521 ------QPTTCLNSIFSANPSSPLLSYEQYFALVFNHLEQL----MEGDFDEIYDLYYKH 570
Q L + L A++ L + + K
Sbjct: 215 EESVVNQGWITLQE------AGINLDRNTLAAMLIRELRAALELFEQEGLAPYLSRWEKL 268
Query: 571 WLHNNVNVTVVSERGEAQQVKIIGIDDFGFLNVRSEEG--YIF----SVRP 615
N V ++ E GID G L + + S+R
Sbjct: 269 DNFINRPVKLIIGDKE-IFGISRGIDKQGALLLEQDGIIKPWMGGEISLRS 318
>3t90_A Glucose-6-phosphate acetyltransferase 1; GNAT fold, glcnac
biosynthesis, alpha/beta protein; HET: EPE; 1.50A
{Arabidopsis thaliana}
Length = 149
Score = 92.2 bits (229), Expect = 3e-22
Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 6/96 (6%)
Query: 12 FAERFHRMKASQD-YLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYR 70
F RF +++ D +++ VIE+ + ++ TGS+++E+KF+ C G IE+VVVD +R
Sbjct: 37 FDRRFEEIRSYGDDHVICVIEEETSGKIAATGSVMIEKKFLRNCGKAGHIEDVVVDSRFR 96
Query: 71 GKELGKLLIAVLVKLAKHFQCYKLTLD-----FSFY 101
GK+LGK ++ L+ K CYK+ LD FY
Sbjct: 97 GKQLGKKVVEFLMDHCKSMGCYKVILDCSVENKVFY 132
>3bfm_A Biotin protein ligase-like protein of unknown FUN; structural
genomics, joint center for structural genomics, J
protein structure initiative; HET: 2PE; 1.70A
{Silicibacter SP}
Length = 235
Score = 94.3 bits (234), Expect = 6e-22
Identities = 31/229 (13%), Positives = 73/229 (31%), Gaps = 35/229 (15%)
Query: 400 PTLLHGLTVIP---------RQQTQGTGRSNNIWLSPPGCAMFSMQLHIDLKSQLGKHLP 450
P L+ G P ++ G ++ ++ L ++ +
Sbjct: 9 PPLMTGEAAGPGQDPFDLACQKAELGVDAGLVVYELGTDVLRAALVLAPEVPLAKAMAML 68
Query: 451 LIQHIVAISIVLAVKSF-NQDIDLGIKWPNDLYVNGNVKLGGIIVTSSILSTFESQMAVC 509
+ + A+ + ++ + + W L +NG + G + + +S ++Q
Sbjct: 69 PV---CGVGFQNALGALAPPEVAVHLDWNGALRINGA-RCGRLRIAASTDDP-DTQPDWL 123
Query: 510 NIGVGMNLDNS------QPTTCLNSIFSANPSSPLLSYEQYFALVFNHLE----QLMEGD 559
+G+ + L T L + A+ ++P L H + EG+
Sbjct: 124 VVGLDLPLWPEGDGGETPDETALYAEGCADVAAPRL-----LESWARHCLHWINRWDEGE 178
Query: 560 FDEIYDLYYKHWLHNNVNVTVVSERGEAQQVKIIGIDDFGFLNVRSEEG 608
+ I+ + T G +G+D+ + +R E
Sbjct: 179 LETIHGEWRGLAHGMGEARTEAGRSGTF-----LGVDEDFGMLLRDETT 222
>4ag7_A Glucosamine-6-phosphate N-acetyltransferase; HET: COA; 1.55A
{Caenorhabditis elegans} PDB: 4ag9_A*
Length = 165
Score = 91.1 bits (226), Expect = 1e-21
Identities = 37/96 (38%), Positives = 60/96 (62%), Gaps = 6/96 (6%)
Query: 12 FAERFHRMKAS-QDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYR 70
F +RF M+ S +Y + VIED+ +++V+ + SL++E KFIH +G++E+VVVD R
Sbjct: 54 FEKRFEAMRTSVPNYHIVVIEDSNSQKVVASASLVVEMKFIHGAGSRGRVEDVVVDTEMR 113
Query: 71 GKELGKLLIAVLVKLAKHFQCYKLTLDFS-----FY 101
++LG +L+ LV L K YK++L+ FY
Sbjct: 114 RQKLGAVLLKTLVSLGKSLGVYKISLECVPELLPFY 149
>2o28_A Glucosamine 6-phosphate N-acetyltransferase; structural genomics,
structural genomics consortium, SGC; HET: 16G COA; 1.80A
{Homo sapiens} PDB: 2huz_A* 3cxq_A* 3cxs_A 3cxp_A
Length = 184
Score = 90.4 bits (224), Expect = 4e-21
Identities = 47/95 (49%), Positives = 63/95 (66%), Gaps = 5/95 (5%)
Query: 12 FAERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRG 71
F + F MK S DY VTV+ED Q++ T +LI+E KFIH CA +G++E+VVV D RG
Sbjct: 71 FMKSFEHMKKSGDYYVTVVEDVTLGQIVATATLIIEHKFIHSCAKRGRVEDVVVSDECRG 130
Query: 72 KELGKLLIAVLVKLAKHFQCYKLTLDFS-----FY 101
K+LGKLL++ L L+K CYK+TL+ FY
Sbjct: 131 KQLGKLLLSTLTLLSKKLNCYKITLECLPQNVGFY 165
>3i3g_A N-acetyltransferase; malaria, structural genomics, structural
genomics consortium, SGC,; 1.86A {Trypanosoma brucei}
PDB: 3fb3_A
Length = 161
Score = 85.9 bits (213), Expect = 7e-20
Identities = 29/84 (34%), Positives = 45/84 (53%)
Query: 14 ERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGKE 73
M+ + V T +++G+ SL+++ KF G IE+VVVD +YRG
Sbjct: 53 ANIADMRRRAGIVTKVFCHQPTGRIVGSASLMIQPKFTRGGRAVGHIEDVVVDPSYRGAG 112
Query: 74 LGKLLIAVLVKLAKHFQCYKLTLD 97
LGK LI L ++++ CYK+ LD
Sbjct: 113 LGKALIMDLCEISRSKGCYKVILD 136
>1i12_A Glucosamine-phosphate N-acetyltransferase; GNAT, alpha/beta; HET:
ACO; 1.30A {Saccharomyces cerevisiae} SCOP: d.108.1.1
PDB: 1i1d_A* 1i21_A
Length = 160
Score = 83.3 bits (206), Expect = 5e-19
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 11 HFAERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYR 70
+ K Y VI D RT+ V TG++I+E+K IHE L G IE++ V+ Y+
Sbjct: 49 ATVWNDNEDKKIMQYNPMVIVDKRTETVAATGNIIIERKIIHELGLCGHIEDIAVNSKYQ 108
Query: 71 GKELGKLLIAVLVKLAKHFQCYKLTLDFS-----FY 101
G+ LGKLLI LV + + CYK+ LD FY
Sbjct: 109 GQGLGKLLIDQLVTIGFDYGCYKIILDCDEKNVKFY 144
>2dxq_A AGR_C_4057P, acetyltransferase; structural genomics, PSI-2, protein
struc initiative, midwest center for structural
genomics, MCSG; 1.80A {Agrobacterium tumefaciens str}
Length = 150
Score = 82.5 bits (204), Expect = 1e-18
Identities = 18/87 (20%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Query: 11 HFAERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYR 70
F M A + V + + + T +L++ IE VV + R
Sbjct: 37 EAGAVFAAMLAQPGLTIFVATEN--GKPVATATLLIVPNLTRAARPYAFIENVVTLEARR 94
Query: 71 GKELGKLLIAVLVKLAKHFQCYKLTLD 97
G+ G+ ++ ++ A CYK+ L
Sbjct: 95 GRGYGRTVVRHAIETAFGANCYKVMLL 121
>2vez_A Putative glucosamine 6-phosphate acetyltransferase;
acyltransferase; HET: ACO G6P; 1.45A {Aspergillus
fumigatus} PDB: 2vxk_A*
Length = 190
Score = 82.3 bits (203), Expect = 3e-18
Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 12 FAERFHRMKA-SQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYR 70
+ R+ ++A S +Y + V+ D +++GTGSL++E+KFIH + G IE++ V+ +
Sbjct: 80 WNSRYEWIRARSDEYYLLVVCDG-EGRIVGTGSLVVERKFIHSLGMVGHIEDIAVEKGQQ 138
Query: 71 GKELGKLLIAVLVKLAKHFQCYKLTLDFS-----FY 101
GK+LG +I L +A+ CYK LD S FY
Sbjct: 139 GKKLGLRIIQALDYVAEKVGCYKTILDCSEANEGFY 174
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 69.1 bits (168), Expect = 3e-12
Identities = 102/679 (15%), Positives = 220/679 (32%), Gaps = 196/679 (28%)
Query: 9 VFHFAERFHR---MKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVV- 64
+ F + F K QD +++ +I + + + L K EE+V
Sbjct: 22 LSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWT-LLSKQEEMVQ 80
Query: 65 --VDDTYRGKELGKLLIAVLVKLAKHFQCYKLTLDFSFYT-----CWKLSYIF--LMVIR 115
V++ R L+ + + + ++ Y + + +F V R
Sbjct: 81 KFVEEVLR-INYKFLMSPI------KTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSR 133
Query: 116 SQ-------VLKMVYTAGYLIGHPEA---KTKL-LDTARKL----------------YTK 148
Q L + A ++ KT + LD
Sbjct: 134 LQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN 193
Query: 149 KTQSVVQM-KKMELEFCQSAASRAPSEAYMPILVNEAPSDFNVDEYYRHLNTKKLGQ-LV 206
++V++M +K+ + + SR+ + + + ++ ++ R L +K L+
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR-----RLLKSKPYENCLL 248
Query: 207 IYSGVMSSSH-NVL-VSSQTSVSTLVGSSAIFIFLMVIRSQVLKMVYTAGYLIGHPEAKT 264
+ V ++ N +S + ++T + FL + + + + + L E K+
Sbjct: 249 VLLNVQNAKAWNAFNLSCKILLTT--RFKQVTDFLSAATTTHISLDHHSMTL-TPDEVKS 305
Query: 265 KLLDTARKLYTKKTQSVVQMKKMELEFCQSAASRAPSEAY--MPILVN---EAPSDF-NV 318
LL + + +L P E P ++ E+ D
Sbjct: 306 LLL------------KYLDCRPQDL----------PREVLTTNPRRLSIIAESIRDGLAT 343
Query: 319 DEYYRHLNTKKLGQLMKKMELEFCQSAASRAPSEAYMPILVNEAPSDFNVDEYYRHLNTK 378
+ ++H+N KL ++ + L + A R + + + V F H+ T
Sbjct: 344 WDNWKHVNCDKLTTII-ESSLNVLEPAEYR---KMFDRLSV------FPPSA---HIPTI 390
Query: 379 KLGQL---VIYSGVMSSSHNVLDGPTLLHGLTVIPRQQTQGTGRSNNIWLSPPGCAMFSM 435
L + VI S VM V++ LH +++ +Q + T +I+L +
Sbjct: 391 LLSLIWFDVIKSDVMV----VVN---KLHKYSLVEKQPKESTISIPSIYL--------EL 435
Query: 436 QLHIDLKSQLGKHLPLIQHIVAISIVLAVKSFNQDIDLGIKWPNDLYVNGNVKLGGIIVT 495
++ ++ + L H ++ H K+F+ D DL + D Y
Sbjct: 436 KVKLENEYAL--HRSIVDH------YNIPKTFDSD-DLIPPY-LDQYF------------ 473
Query: 496 SSILSTFESQMAVCNIGVGM-NLDNSQPTTCLNSIF---------------SANPSSPLL 539
+ +IG + N+++ + T +F + N S +L
Sbjct: 474 ------YS------HIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSIL 521
Query: 540 S-------YEQYFALVFNHLEQLMEGDFDEIYDLYYKHWLHNNVNVTVVSERGEAQQVKI 592
+ Y+ Y E+L + + +L + S+ + +
Sbjct: 522 NTLQQLKFYKPYICDNDPKYERL-------VNAI--LDFLPKIEENLICSKYTDLLR--- 569
Query: 593 IGIDDFGFLNVRSEEGYIF 611
+ E+ IF
Sbjct: 570 -----IALMA---EDEAIF 580
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 64.7 bits (157), Expect = 8e-11
Identities = 85/573 (14%), Positives = 155/573 (27%), Gaps = 228/573 (39%)
Query: 4 LPTSNVFHFA---ERFH-------RMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHE 53
+PT++ F + E+F+ A+ D T E L KF+
Sbjct: 22 VPTASFFIASQLQEQFNKILPEPTEGFAADDEPTTPAE--------------LVGKFLGY 67
Query: 54 CALKGKIEEVVVDDTYRGKELGKLLIAVLVKLAKHFQCYKL------TLDFSFYTCWKLS 107
+ V+ + G + ++L L F+ L L +
Sbjct: 68 VSSL-------VEPSKVG-QFDQVLNLCL----TEFENCYLEGNDIHALAAKLLQENDTT 115
Query: 108 YIFLMVIRSQVLKMVYTAGYLIGHPEAKT---KLLDTA---------------------- 142
+V +++K TA + P K L
Sbjct: 116 ----LVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFE 171
Query: 143 --RKLYTKKT-QSVVQMKKMELEFCQSAASRAPSEAYMPILVNEAPSDFNVDEYYRH-LN 198
R LY +T +V + + +A L + + ++ + LN
Sbjct: 172 ELRDLY--QTYHVLVG------DLIKFSAET---------LSELIRTTLDAEKVFTQGLN 214
Query: 199 TKK-------------------------LGQLVIY------------------SGVMSSS 215
+ + QL Y G S
Sbjct: 215 ILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHS 274
Query: 216 HNVLVSSQTSVST------LVGSSAI-FIFLMVIRSQ-----------VLKMVYTAGYLI 257
++ + + + + AI +F + +R +L+
Sbjct: 275 QGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENN--E 332
Query: 258 GHPEAKTKLLDTARKLYTKKTQSVVQMKKMELE-FCQSAASRAPSEAYMPI-LVNEAPSD 315
G P + +L S+ + + +++ + S P+ + I LVN +
Sbjct: 333 GVP---SPML------------SISNLTQEQVQDYVNKTNSHLPAGKQVEISLVN-GAKN 376
Query: 316 FNVD---EYYRHLNTKKLGQLMK-KMELEFCQSAA---SRAP--SEAYMPI-------LV 359
V + LN L K K QS R S ++P+ L+
Sbjct: 377 LVVSGPPQSLYGLNL----TLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSHLL 432
Query: 360 NEA----------------PSDFNVDEY-------YRHLNTKKLGQLV--IYSG------ 388
A D + Y R L+ ++V I
Sbjct: 433 VPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVDCIIRLPVKWET 492
Query: 389 --VMSSSHNVLD-GPTLLHGLTVIPRQQTQGTG 418
++H +LD GP GL V+ + GTG
Sbjct: 493 TTQFKATH-ILDFGPGGASGLGVLTHRNKDGTG 524
Score = 56.2 bits (135), Expect = 3e-08
Identities = 70/508 (13%), Positives = 136/508 (26%), Gaps = 201/508 (39%)
Query: 161 LEFCQSAASRAPSEAYMPIL---VNEAPSDFNVDEYYRHLNTKKLGQLVIYSGVMSSSHN 217
L + S + + +L + E + + L + H
Sbjct: 65 LGYVSSLVEPSKVGQFDQVLNLCLTEFENCY--------LEGNDI-------------HA 103
Query: 218 VLVSSQTSVSTLVGSSAIFIFLMVIRSQVLKMVYTAGYLIGHPEAKT---KLLDTA---- 270
+ T + +++K TA + P K L
Sbjct: 104 LAAKLLQENDTTLVK----------TKELIKNYITARIMAKRPFDKKSNSALFRAVGEGN 153
Query: 271 --------------------RKLYTKKT-QSVVQMKKMELEFCQSAASRAPSEAYMPILV 309
R LY +T +V + + +A L
Sbjct: 154 AQLVAIFGGQGNTDDYFEELRDLY--QTYHVLVG------DLIKFSAET---------LS 196
Query: 310 NEAPSDFNVDEYYRH-LNTKKLGQLMKKMELEFCQSAASRAPSEAY-------MPI---- 357
+ + ++ + LN + + ++ S P + Y P+
Sbjct: 197 ELIRTTLDAEKVFTQGLN---ILEWLEN---------PSNTPDKDYLLSIPISCPLIGVI 244
Query: 358 -LVNEA----PSDFNVDEYYRHLN-TKKLGQLVIYSGVMSSSH-------NVLDGPTLL- 403
L + F E +L Q ++ + ++ + +V T+L
Sbjct: 245 QLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLF 304
Query: 404 -HGLTVIPRQQTQGTGRSNNIWLSP-------------PGCAMFS--------MQLHIDL 441
G+ R + ++ L P P M S +Q +++
Sbjct: 305 FIGV----RCY-EAYPNTS---LPPSILEDSLENNEGVP-SPMLSISNLTQEQVQDYVN- 354
Query: 442 KSQLGKHLPLIQHIVAISIVLAVKSFNQDIDLGIKWPNDLYVNG--NVKLGGIIVTSSIL 499
+ HLP + + I L VNG N+ +V+
Sbjct: 355 --KTNSHLPAGKQ---VEISL--------------------VNGAKNL-----VVSGPPQ 384
Query: 500 STFESQMAVCNIGVGMNLDNSQ-PTTCLNSIFSAN--P-SSPLLSYEQYFALVFNHLEQL 555
S + + + LD S+ P + FS P +SP F H L
Sbjct: 385 SLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASP-------F-----H-SHL 431
Query: 556 MEGDFDEIY-DLYYKH--WLHNNVNVTV 580
+ D I DL + + ++ + V
Sbjct: 432 LVPASDLINKDLVKNNVSFNAKDIQIPV 459
Score = 43.9 bits (103), Expect = 2e-04
Identities = 58/457 (12%), Positives = 123/457 (26%), Gaps = 158/457 (34%)
Query: 218 VLVSSQTSVSTLVGSSAIFIFLMVIRSQVLKMVY--TAGYLIGH-PEAKTKLLDTARKLY 274
L LV +A F ++ Q K++ T G+ P +L+ + +
Sbjct: 10 TLSHGSLEHVLLV-PTASFFIASQLQEQFNKILPEPTEGFAADDEPTTPAELV--GK--F 64
Query: 275 TKKTQSVVQMKKMELEFCQSAASRAPSEAYMPIL---VNEAPSDF----NVDEYYRHLNT 327
L + S + + +L + E + + ++ L
Sbjct: 65 --------------LGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQ 110
Query: 328 KKLGQLMKKMELEFCQSAASRAPSEAYMPILVNEAPSDFNVDEYYRHLNTKKLGQLVIYS 387
+ L+K EL ++ A A P ++ S +R + + I+
Sbjct: 111 ENDTTLVKTKEL--IKNYI-TARIMAKRPF-DKKSNSAL-----FRAVGEGNAQLVAIFG 161
Query: 388 GVMSSSHNVLDGPTLLHGLTVIPRQQTQGTGRSNNIWL---------SPPGCAMFSMQLH 438
G QG + + L
Sbjct: 162 G--------------------------QGN---TDDYFEELRDLYQTYHV--------LV 184
Query: 439 IDLKSQLGKHL-PLIQHIVAISIVLAVKSFNQDIDLGIKW-------PNDLYVNGN-VKL 489
DL + L LI+ + K F Q +++ ++W P+ Y+ +
Sbjct: 185 GDLIKFSAETLSELIRTTLDAE-----KVFTQGLNI-LEWLENPSNTPDKDYLLSIPISC 238
Query: 490 GGIIVTSSILSTFESQMAVCNIGVGMNLDNSQP-----TTCLNSIFSANPSSPLLSYEQY 544
I V L+ + + + +G + T + +A + S+E +
Sbjct: 239 PLIGVIQ--LAHY---VVTAKL-LGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESF 292
Query: 545 FALVFNHLEQLMEGDFDEIYDLYYKHWLHNNVNVTVVSERG-EAQQVKIIGIDDFGFLNV 603
F V + L F ++ G + + ++
Sbjct: 293 FVSVRKAITVL----F----------FI------------GVRCYEA-------YPNTSL 319
Query: 604 RSE---------EG---YIFSVRPDGNTFDMLNGLIA 628
EG + S+ T + + +
Sbjct: 320 PPSILEDSLENNEGVPSPMLSIS--NLTQEQVQDYVN 354
Score = 39.3 bits (91), Expect = 0.004
Identities = 51/290 (17%), Positives = 92/290 (31%), Gaps = 96/290 (33%)
Query: 244 SQVLKM---VYTAGYLIGHPEAKTKLLDTARKLYTKKT-----QSVVQ--MKKMELEFCQ 293
SQ M +Y A+ + + A + K T +V + + F
Sbjct: 1626 SQEQGMGMDLYKT-----SKAAQ-DVWNRA-DNHFKDTYGFSILDIVINNPVNLTIHF-G 1677
Query: 294 SAASRAPSEAYMPILVNEAPSDFNV--DEYYRHLNTKKLGQLM---KKMEL---EFCQSA 345
+ E Y ++ E D + ++ ++ +N + +K L +F Q A
Sbjct: 1678 GEKGKRIRENYSAMIF-ETIVDGKLKTEKIFKEIN-EHSTSYTFRSEKGLLSATQFTQPA 1735
Query: 346 ---ASRAPSEAYMPILVNEAPSDFNVDEYYR-HLNTKKLGQ---LVIYSGVMSSSHNVLD 398
+A E ++ D + H LG+ L + VMS
Sbjct: 1736 LTLMEKAAFEDL------KSKGLIPADATFAGH----SLGEYAALASLADVMSIE----S 1781
Query: 399 GPTLLH--GLTV---IPRQQTQGTGRSNNIWLSPPGCAMFSMQLHIDLKSQLGKHLPLIQ 453
++ G+T+ +PR + GRSN + M
Sbjct: 1782 LVEVVFYRGMTMQVAVPRDE---LGRSN-----------YGM------------------ 1809
Query: 454 HIVAISIVLAVKSFNQD-----IDLGIKWPNDL--YVNGNVKLGGIIVTS 496
+AI+ SF+Q+ ++ K L VN NV+ V +
Sbjct: 1810 --IAINPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVE-NQQYVAA 1856
Score = 33.1 bits (75), Expect = 0.40
Identities = 42/279 (15%), Positives = 77/279 (27%), Gaps = 94/279 (33%)
Query: 67 DTYRGKELGKLLIAVLVK-----LAKHF---------QCY-KLTLDFSFYTCWKLSYIFL 111
D + G I +V L HF + Y + + K IF
Sbjct: 1650 DNHFKDTYG-FSILDIVINNPVNLTIHFGGEKGKRIRENYSAMIFETIVDGKLKTEKIFK 1708
Query: 112 MVIRSQVLKMVYTAGYLIGHPEAKTKLLDTARKLYTKKTQ------SVVQMKKME----- 160
+ + Y + LL T+ TQ + ++
Sbjct: 1709 EINEH-------STSYTFRSEKG---LLSA-----TQFTQPALTLMEKAAFEDLKSKGLI 1753
Query: 161 ----------L-EFCQSA-ASRAPSEAYMPI-----LVNEAPSDFNVDEYYRHLNTKKLG 203
L E+ +A AS A M I +V +YR G
Sbjct: 1754 PADATFAGHSLGEY--AALASLA---DVMSIESLVEVV-----------FYR-------G 1790
Query: 204 QL----VIYSGVMSSSHNVLVSSQTSVSTLVGSSAIFIFLMVIRSQVLKMV----Y-TAG 254
V + S++ ++ + V+ A+ + + + +V Y
Sbjct: 1791 MTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVEN 1850
Query: 255 --YLI-GHPEAKTKLLDTARKLYTKKTQSVVQMKKMELE 290
Y+ G A + + + +K + K + LE
Sbjct: 1851 QQYVAAGDLRALDTVTNVLNFIKLQKIDIIELQKSLSLE 1889
Score = 33.1 bits (75), Expect = 0.41
Identities = 18/135 (13%), Positives = 43/135 (31%), Gaps = 38/135 (28%)
Query: 457 AIS---IVLAVKSFNQDIDLGIKWPNDLYVNGNVKLGGIIVTSSILSTFESQMAVCNIGV 513
A S + L+ S + + P + + + F +
Sbjct: 3 AYSTRPLTLSHGSLEHVLLV----PTASFFIASQ----------LQEQFNKIL------- 41
Query: 514 GMNLDNSQPTTCLNSIFSANPSSPLLSYEQYFALVFNHLEQLMEGDFDEIYDLYYKH--- 570
+PT + P++P ++ V + +E G FD++ +L
Sbjct: 42 ------PEPTEGFAA--DDEPTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFEN 93
Query: 571 -WLHNNVNV-TVVSE 583
+L N ++ + ++
Sbjct: 94 CYLEGN-DIHALAAK 107
Score = 29.2 bits (65), Expect = 5.1
Identities = 32/156 (20%), Positives = 52/156 (33%), Gaps = 53/156 (33%)
Query: 480 DLYVNGNVKLGGII-----VTSSILSTFESQMAVCNIGVGMNL-DNSQP---TTCLNSIF 530
+ V+G +K I ++S TF S+ + ++ +QP + F
Sbjct: 1694 ETIVDGKLKTEKIFKEINEHSTSY--TFRSEKGL------LSATQFTQPALTLMEK-AAF 1744
Query: 531 S---ANPSSPLLSY-------EQYFALVFNHLEQLMEGDFDEIYDLYYKHWLHNNVNVTV 580
+ P + E Y AL L +M + L V V
Sbjct: 1745 EDLKSKGLIPADATFAGHSLGE-YAALA--SLADVM--SIE---SL-----------VEV 1785
Query: 581 VSERGEAQQVKIIGIDDFGFLNVRSEEGYIFSVRPD 616
V RG QV + D+ G RS G + ++ P
Sbjct: 1786 VFYRGMTMQVAVPR-DELG----RSNYG-MIAINPG 1815
>3t9y_A Acetyltransferase, GNAT family; PSI-biology, structural genomics,
midwest center for structu genomics, MCSG; HET: PGE;
2.00A {Staphylococcus aureus}
Length = 150
Score = 57.9 bits (140), Expect = 3e-10
Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Query: 12 FAERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRG 71
+R ++ DY + ++ ++IG + + A +I V+ +R
Sbjct: 38 LKKRLKKITNHDDYFLLLLIKE--NKIIGLSGMCKMMFYEK-NAEYMRILAFVIHSEFRK 94
Query: 72 KELGKLLIAVLVKLAKHFQCYKLTLD 97
K GK L+A + +K C +TL+
Sbjct: 95 KGYGKRLLADSEEFSKRLNCKAITLN 120
>1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold,
structural genomics, PSI, P structure initiative; 2.00A
{Bacillus halodurans} SCOP: d.108.1.1
Length = 153
Score = 57.9 bits (140), Expect = 4e-10
Identities = 15/84 (17%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Query: 13 AERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGK 72
F +K ++ + V + +++G + ++ + + IE V RG+
Sbjct: 43 VRAFKEIKKDKNNELIVACNGE--EIVGMLQVTFTPYLTYQGSWRATIEGVRTHSAARGQ 100
Query: 73 ELGKLLIAVLVKLAKHFQCYKLTL 96
+G L+ ++ AK C+ + L
Sbjct: 101 GIGSQLVCWAIERAKERGCHLIQL 124
>3mgd_A Predicted acetyltransferase; structural genomics, PSI-2, protein
structure initiative, no structural genomics consortium,
NESG; HET: ACO; 1.90A {Clostridium acetobutylicum}
Length = 157
Score = 50.9 bits (122), Expect = 9e-08
Identities = 17/89 (19%), Positives = 33/89 (37%), Gaps = 5/89 (5%)
Query: 12 FAERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGK---IEEVVVDDT 68
F+ A+ + + E+ Q+I T ++ G+ I + + T
Sbjct: 38 LTRYFNNKLANNLLVEWIAEEN--NQIIATAAIAFIDFPPTYTNKTGRKGYITNMYTEPT 95
Query: 69 YRGKELGKLLIAVLVKLAKHFQCYKLTLD 97
RG + ++ LV AK +K+ L
Sbjct: 96 SRGNGIATGMLDRLVNEAKERNIHKICLV 124
>2r1i_A GCN5-related N-acetyltransferase; YP_831484.1, putative
acetyltransferase, arthrobacter SP. FB acetyltransferase
(GNAT) family; HET: MSE; 1.65A {Arthrobacter SP}
Length = 172
Score = 48.6 bits (116), Expect = 8e-07
Identities = 21/95 (22%), Positives = 32/95 (33%), Gaps = 11/95 (11%)
Query: 5 PTSNVFHFAERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGK---IE 61
PT A R + A +D +V + + G L F G ++
Sbjct: 50 PTPGTDELASRLSHLLAGEDVVVLLAGE----PPTGLAVLS----FRPNVWYPGPVAILD 101
Query: 62 EVVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLTL 96
E+ V RG LG L+A L + L +
Sbjct: 102 ELYVRPGRRGHRLGSALLAASCGLVRSRGGALLEI 136
>4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure
initiati northeast structural genomics consortium, NESG,
transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A*
Length = 164
Score = 45.4 bits (108), Expect = 8e-06
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Query: 14 ERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGK---IEEVVVDDTYR 70
RF + V V D +++ + L Q + + K I ++ VD+T R
Sbjct: 43 SRFQAAVQGEKSTVLVFVD-EREKIGAYSVIHLVQTPLLPTMQQRKTVYISDLCVDETRR 101
Query: 71 GKELGKLLIAVLVKLAKHFQCYKLTLD 97
G +G+L+ ++ K Q + LD
Sbjct: 102 GGGIGRLIFEAIISYGKAHQVDAIELD 128
>2q0y_A GCN5-related N-acetyltransferase; YP_295895.1, acetyltransferase
(GNAT) family, structural genomics, joint center for ST
genomics; HET: MSE; 1.80A {Ralstonia eutropha JMP134}
Length = 153
Score = 43.2 bits (102), Expect = 4e-05
Identities = 15/91 (16%), Positives = 30/91 (32%), Gaps = 6/91 (6%)
Query: 11 HFAERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIH----ECALKGKIEEVVVD 66
F + A Y V+E+ + L++ + H +G I + VD
Sbjct: 39 PFRDWLLPRLADGSYFGWVMEEG--GAPLAGIGLMVIEWPPHPSHPLQDKRGYILNLYVD 96
Query: 67 DTYRGKELGKLLIAVLVKLAKHFQCYKLTLD 97
++R + +G+ L+ L
Sbjct: 97 PSHRERGIGQALMNRAEAEFAERGIAFAVLH 127
>1on0_A YYCN protein; structural genomics, alpha-beta protein with
anti-parallel B strands, PSI, protein structure
initiative; 2.20A {Bacillus subtilis} SCOP: d.108.1.1
Length = 158
Score = 42.9 bits (101), Expect = 6e-05
Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Query: 12 FAERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRG 71
F + R + + + ++ K ++G + E + + A I + + + YRG
Sbjct: 47 FTDLLPRGLETPHHHLWSLKL-NEKDIVGWLWIHAEPEHPQQEAF---IYDFGLYEPYRG 102
Query: 72 KELGKLLIAVLVKLAKHFQCYKLTLD 97
K K +A L + A+ KL+L
Sbjct: 103 KGYAKQALAALDQAARSMGIRKLSLH 128
>1ufh_A YYCN protein; alpha and beta, fold, acetyltransferase, structural
genomics, PSI, protein structure initiative; 2.20A
{Bacillus subtilis subsp} SCOP: d.108.1.1
Length = 180
Score = 42.5 bits (100), Expect = 1e-04
Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Query: 12 FAERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRG 71
F + R + + + ++ K ++G + E + + A I + + + YRG
Sbjct: 71 FTDLLPRGLETPHHHLWSLKL-NEKDIVGWLWIHAEPEHPQQEAF---IYDFGLYEPYRG 126
Query: 72 KELGKLLIAVLVKLAKHFQCYKLTLD 97
K K +A L + A+ KL+L
Sbjct: 127 KGYAKQALAALDQAARSMGIRKLSLH 152
>2atr_A Acetyltransferase, GNAT family; MCSG, structural genomics, PSI,
protein structure INIT midwest center for structural
genomics; 2.01A {Streptococcus pneumoniae} SCOP:
d.108.1.1
Length = 138
Score = 41.0 bits (96), Expect = 2e-04
Identities = 12/93 (12%), Positives = 34/93 (36%), Gaps = 14/93 (15%)
Query: 14 ERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGKE 73
E + + + ++ V+G L+ + +++++V +Y+ +
Sbjct: 32 EMLEQALSHSLVIYLALDG---DAVVGLIRLV------GDGFSSVFVQDLIVLPSYQRQG 82
Query: 74 LGKLLIAVLVKLAKHFQCYKLTLDFS-----FY 101
+G L+ + K +L + + FY
Sbjct: 83 IGSSLMKEALGNFKEAYQVQLATEETEKNVGFY 115
>4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for
structural genomics of infectious diseases (csgid
national institute of allergy and infectious diseases;
HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A
4e8o_A
Length = 166
Score = 41.3 bits (97), Expect = 2e-04
Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 4/86 (4%)
Query: 14 ERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALK--GKIEEVVVDDTYRG 71
+ H++ A + L + Q I + ++++ G +E + V +R
Sbjct: 52 QEMHQLLAEKYALQLLAYSDH--QAIAMLEASIRFEYVNGTETSPVGFLEGIYVLPAHRR 109
Query: 72 KELGKLLIAVLVKLAKHFQCYKLTLD 97
+ +LI AK F C + D
Sbjct: 110 SGVATMLIRQAEVWAKQFSCTEFASD 135
>3jvn_A Acetyltransferase; alpha-beta protein, structural genomics, PSI-2,
protein STRU initiative, northeast structural genomics
consortium, NESG; 2.61A {Vibrio fischeri}
Length = 166
Score = 40.8 bits (96), Expect = 3e-04
Identities = 15/98 (15%), Positives = 36/98 (36%), Gaps = 12/98 (12%)
Query: 14 ERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALK--GKIEEVVVDDTYRG 71
+ R + +V V E +IG + + L I+E+ ++ YR
Sbjct: 45 KSIARYLDDPECMVYVAEMD--DVIIGFITGHFCELISTVSKLVMMATIDELYIEKEYRR 102
Query: 72 KELGKLLIAVLVKLAKHFQCYKLTLDF--------SFY 101
+ + + L+ + + K + ++ ++ FY
Sbjct: 103 EGVAEQLMMRIEQELKDYGVKEIFVEVWDFNKGALEFY 140
>3s6f_A Hypothetical acetyltransferase; acyl-COA N-acyltransferases,
structural genomics, joint CENT structural genomics,
JCSG; HET: MSE COA; 1.19A {Deinococcus radiodurans}
Length = 145
Score = 40.2 bits (94), Expect = 4e-04
Identities = 17/91 (18%), Positives = 27/91 (29%), Gaps = 11/91 (12%)
Query: 14 ERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGKE 73
E R+ V QVIG + + + I + V +R
Sbjct: 38 ETLWRILDRAAVFVLARTPD--GQVIGFVNALSDGILA------ASIPLLEVQAGWRSLG 89
Query: 74 LGKLLIAVLVKLAKHFQCYKLTLD---FSFY 101
LG L+ ++ L+ D FY
Sbjct: 90 LGSELMRRVLTELGDLYMVDLSCDDDVVPFY 120
>1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside
ribostamycin; HET: COA RIO; 2.00A {Salmonella
enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A*
2vbq_A*
Length = 165
Score = 39.8 bits (93), Expect = 7e-04
Identities = 12/87 (13%), Positives = 30/87 (34%), Gaps = 4/87 (4%)
Query: 13 AERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALK--GKIEEVVVDDTYR 70
+ + + IG + +++ C +E + V ++R
Sbjct: 51 LADGEEILQADHLASFIAMADG--VAIGFADASIRHDYVNGCDSSPVVFLEGIFVLPSFR 108
Query: 71 GKELGKLLIAVLVKLAKHFQCYKLTLD 97
+ + K LIA + + + C ++ D
Sbjct: 109 QRGVAKQLIAAVQRWGTNKGCREMASD 135
>1bo4_A Protein (serratia marcescens aminoglycoside-3-N-
acetyltransferase); eubacterial aminoglyco resistance,
GCN5-related N-acetyltransferase; HET: SPD COA; 2.30A
{Serratia marcescens} SCOP: d.108.1.1
Length = 168
Score = 39.8 bits (93), Expect = 7e-04
Identities = 13/72 (18%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
Query: 25 YLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGKELGKLLIAVLVK 84
L ++ V+G + + KF + + I ++ V +R + + LI +L
Sbjct: 78 ALAAFDQE----AVVGALAAYVLPKF-EQPRSEIYIYDLAVSGEHRRQGIATALINLLKH 132
Query: 85 LAKHFQCYKLTL 96
A Y + +
Sbjct: 133 EANALGAYVIYV 144
>1ghe_A Acetyltransferase; acyl coenzyme A complex; HET: ACO; 1.55A
{Pseudomonas syringae PV} SCOP: d.108.1.1 PDB: 1j4j_A*
Length = 177
Score = 39.8 bits (93), Expect = 0.001
Identities = 20/99 (20%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 1 MSKLPTSNVFHFAERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKF--IHECALKG 58
M+ L + + + A+ L+ V+ + V+ + L L QK ++ ++
Sbjct: 38 MADLDMQQAYAWCDGLKADIAAGSLLLWVVAED--DNVLASAQLSLCQKPNGLNRAEVQK 95
Query: 59 KIEEVVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLTLD 97
++V + RG+ LG+ L+ + ++A + L LD
Sbjct: 96 ----LMVLPSARGRGLGRQLMDEVEQVAVKHKRGLLHLD 130
>1m4i_A Aminoglycoside 2'-N-acetyltransferase; COA binding motif; HET: COA
KAN PAP; 1.50A {Mycobacterium tuberculosis} SCOP:
d.108.1.1 PDB: 1m4d_A* 1m4g_A* 1m44_A*
Length = 181
Score = 39.2 bits (91), Expect = 0.001
Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 9/72 (12%)
Query: 37 QVIGTGSLILEQKFIHECALK-GKIEEVVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLT 95
+I ++I + AL+ G +E V V +RG+ L L+ + ++ + Y+L
Sbjct: 57 AIIAHAAVIQRRLIYRGNALRCGYVEGVAVRADWRGQRLVSALLDAVEQVMRG--AYQLG 114
Query: 96 LDF------SFY 101
Y
Sbjct: 115 ALSSSARARRLY 126
>3dsb_A Putative acetyltransferase; APC60368.2, ST genomics, PSI-2, protein
structure initiative, midwest CENT structural genomics,
MCSG; HET: MSE; 1.48A {Clostridium difficile}
Length = 157
Score = 38.6 bits (90), Expect = 0.002
Identities = 14/73 (19%), Positives = 22/73 (30%), Gaps = 6/73 (8%)
Query: 25 YLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGKELGKLLIAVLVK 84
Y V + D +V+ E I+ V VD YR K + L +
Sbjct: 57 YHVYTVFD----KVVAQIMYTYEWS-DWRNGNFLWIQSVYVDKEYRRKGIFNYLFNYIKN 111
Query: 85 LAK-HFQCYKLTL 96
+ + L
Sbjct: 112 ICDKDENIVGMRL 124
>3e0k_A Amino-acid acetyltransferase; N-acetylglutamate synthase, structu
genomics, PSI-2, protein structure initiative; HET: MSE;
2.52A {Vibrio parahaemolyticus}
Length = 150
Score = 38.2 bits (89), Expect = 0.002
Identities = 20/129 (15%), Positives = 40/129 (31%), Gaps = 24/129 (18%)
Query: 23 QDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGKELGKLLIAVL 82
+ + + +IG +L + + K ++ V + YR G LL+ +
Sbjct: 43 GKFTIIEKDG----LIIGCAAL-----YPYSEERKAEMACVAIHPDYRDGNRGLLLLNYM 93
Query: 83 VKLAKHFQCYKLTLDFSFYTCWKLSYIFLMVIRSQVLKMVYTAGYLIGHPEAKTKLLDTA 142
+K ++ + + W F V + P AK L +
Sbjct: 94 KHRSKSENINQIFVLTTHSLHWFREQGFYEVGVDYL-------------PGAKQGLYNFQ 140
Query: 143 R--KLYTKK 149
R K+
Sbjct: 141 RKSKILALD 149
>1vkc_A Putative acetyl transferase; structural genomics, pyrococcus
furiosus southeast collaboratory for structural
genomics, secsg; 1.89A {Pyrococcus furiosus} SCOP:
d.108.1.1
Length = 158
Score = 38.2 bits (89), Expect = 0.002
Identities = 14/84 (16%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
Query: 14 ERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGKE 73
E F + + ++ V + +++G + + + + I ++ V RG
Sbjct: 50 ELFESLLSQGEHKFFVALN-ERSELLGHVWICITLDTVDYVKI-AYIYDIEVVKWARGLG 107
Query: 74 LGKLLIAVLVKLAKHFQCYKLTLD 97
+G L+ + AK K+ L
Sbjct: 108 IGSALLRKAEEWAKERGAKKIVLR 131
>2eui_A Probable acetyltransferase; dimer, structural genomics, PSI,
protein structure initiative; 2.80A {Pseudomonas
aeruginosa PAO1} SCOP: d.108.1.1
Length = 153
Score = 38.2 bits (89), Expect = 0.002
Identities = 4/37 (10%), Positives = 17/37 (45%)
Query: 60 IEEVVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLTL 96
+ ++ V + R + + L+ ++A+ ++ +
Sbjct: 81 LNDIYVAEEARRQLVADHLLQHAKQMARETHAVRMRV 117
>2jdc_A Glyphosate N-acetyltransferase; GNAT; HET: CAO; 1.6A {Bacillus
licheniformis} SCOP: d.108.1.1 PDB: 2bsw_A* 2jdd_A*
Length = 146
Score = 37.5 bits (87), Expect = 0.003
Identities = 9/71 (12%), Positives = 25/71 (35%), Gaps = 5/71 (7%)
Query: 36 KQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLT 95
++I S + + + ++ + + YR ++ G LI ++ + L
Sbjct: 48 GKLISIASFHQAEHSELQGQKQYQLRGMATLEGYREQKAGSSLIKHAEEILRKRGADLLW 107
Query: 96 LD-----FSFY 101
+ +Y
Sbjct: 108 CNARTSASGYY 118
>2pdo_A Acetyltransferase YPEA; alpha-beta-alpha sandwich, structural
genomics, PSI-2, prote structure initiative; HET: MSE;
2.00A {Shigella flexneri 2A}
Length = 144
Score = 37.0 bits (86), Expect = 0.005
Identities = 16/85 (18%), Positives = 28/85 (32%), Gaps = 9/85 (10%)
Query: 13 AERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGK 72
R L V E +V+GT + +G + V +RG+
Sbjct: 34 EMDIERKMNHDVSLFLVAEVN--GEVVGTVMGGYDGH-------RGSAYYLGVHPEFRGR 84
Query: 73 ELGKLLIAVLVKLAKHFQCYKLTLD 97
+ L+ L K C K+ ++
Sbjct: 85 GIANALLNRLEKKLIARGCPKIQIN 109
>1q2y_A Protein YJCF, similar to hypothetical proteins; GCN5-related
N-acetyltransferase superfamily fold, NYSGXRC, PSI,
protein structure initiative; 2.00A {Bacillus subtilis}
SCOP: d.108.1.1
Length = 140
Score = 36.8 bits (86), Expect = 0.006
Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 7/62 (11%)
Query: 36 KQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLT 95
++ +G G ++ GK+E + V ++R +G +++ L K A
Sbjct: 51 EKPVGAGRWRMKDG-------YGKLERICVLKSHRSAGVGGIIMKALEKAAADGGASGFI 103
Query: 96 LD 97
L+
Sbjct: 104 LN 105
>1wwz_A Hypothetical protein PH1933; structural genomics, pyrococcus
horikoshii OT3, riken struct genomics/proteomics
initiative, RSGI; HET: ACO; 1.75A {Pyrococcus
horikoshii} SCOP: d.108.1.1
Length = 159
Score = 37.1 bits (86), Expect = 0.006
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Query: 11 HFAERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYR 70
+ + + AS + V + D +++G + +E + G I E VVD ++
Sbjct: 45 YIKWCWKK--ASDGFFVAKVGD----KIVGFIVCDKDWFSKYEGRIVGAIHEFVVDKKFQ 98
Query: 71 GKELGKLLIAVLVKLAK 87
GK +G+ L+ +
Sbjct: 99 GKGIGRKLLITCLDFLG 115
>3fyn_A Integron gene cassette protein HFX_CASS3; integron cassette
protein, mobIle metagenome, structural genomics, PSI-2;
1.45A {Uncultured bacterium}
Length = 176
Score = 37.0 bits (86), Expect = 0.006
Identities = 7/37 (18%), Positives = 14/37 (37%)
Query: 60 IEEVVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLTL 96
+++ V RGK LG + + + L +
Sbjct: 103 VDDFFVRPNARGKGLGAAALQTVKQGCCDLGVRALLV 139
>1y7r_A Hypothetical protein SA2161; structural genomics, protein structure
initiative, PSI, midwest center for structural genomics;
1.70A {Staphylococcus aureus} SCOP: d.108.1.1
Length = 133
Score = 36.4 bits (84), Expect = 0.007
Identities = 15/83 (18%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Query: 14 ERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGKE 73
E + + + VT+ + ++IG G +I + +I ++ V +Y+G+
Sbjct: 29 EAAEKGLPNALFTVTLYDK---DRLIGMGRVI------GDGGTVFQIVDIAVLKSYQGQA 79
Query: 74 LGKLLIAVLVKLAKHFQCYKLTL 96
G L++ ++K K+ + +
Sbjct: 80 YGSLIMEHIMKYIKNVSVESVYV 102
>2ae6_A Acetyltransferase, GNAT family; GCN5-related N-acetyltransferase
(GNAT), alpha-beta, structu genomics, PSI, protein
structure initiative; HET: GOL; 2.19A {Enterococcus
faecalis} SCOP: d.108.1.1
Length = 166
Score = 36.9 bits (86), Expect = 0.007
Identities = 11/84 (13%), Positives = 30/84 (35%), Gaps = 8/84 (9%)
Query: 14 ERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIE-EVVVDDTYRGK 72
+ + V + Q+ G + A + + + V ++ +
Sbjct: 44 AAYQEKMKDETIFVAISGQ----QLAGFIEV---HPPTSLAAHQKQWLLSIGVSPDFQDQ 96
Query: 73 ELGKLLIAVLVKLAKHFQCYKLTL 96
+G L++ + +A+ +KL+L
Sbjct: 97 GIGGSLLSYIKDMAEISGIHKLSL 120
>1u6m_A Acetyltransferase, GNAT family; structural genomics, PSI, protein
structure initiative; 2.40A {Enterococcus faecalis}
SCOP: d.108.1.1
Length = 199
Score = 37.3 bits (86), Expect = 0.007
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 60 IEEVVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLTLD 97
++ + VD+ +RG +G L+ L ++AK L L+
Sbjct: 115 LDTISVDERFRGMGIGSKLLDALPEVAKASGKQALGLN 152
>3c26_A Putative acetyltransferase TA0821; NP_394282.1, A putative
acetyltransferase, acetyltransferase family, structural
genomics; 2.00A {Thermoplasma acidophilum dsm 1728}
Length = 266
Score = 37.8 bits (87), Expect = 0.008
Identities = 10/87 (11%), Positives = 25/87 (28%), Gaps = 11/87 (12%)
Query: 11 HFAERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYR 70
+ + R V + + + T + + + V YR
Sbjct: 48 YVDKVIERWVNDGSVYVLRVSG----RPVATIHMEKLPDGSVM------LGGLRVHPEYR 97
Query: 71 GKELGKLLIAVLVKLAKHFQCYKLTLD 97
G LG ++ ++ + + +L
Sbjct: 98 GSRLGMSIMQETIQFLRG-KTERLRSA 123
>1n71_A AAC(6')-II; aminoglycoside 6'-N-acetyltransferase, antibiotic
resistance, coenzyme A; HET: COA; 1.80A {Enterococcus
faecium} SCOP: d.108.1.1 PDB: 2a4n_A* 1b87_A*
Length = 180
Score = 36.3 bits (83), Expect = 0.013
Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 7/85 (8%)
Query: 13 AERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGK 72
+ + + + D +++G I Q I ++ +VV+ + R
Sbjct: 33 SAEEVEEMMNPERIAVAAVDQ--DELVGFIGAI-PQYGITGW----ELHPLVVESSRRKN 85
Query: 73 ELGKLLIAVLVKLAKHFQCYKLTLD 97
++G L+ L K + L
Sbjct: 86 QIGTRLVNYLEKEVASRGGITIYLG 110
>2fiw_A GCN5-related N-acetyltransferase:aminotransferase II;
alpha-beta-alpha sandwich, GCN4-related
acetyltransferase, S genomics, PSI; HET: ACO; 2.35A
{Rhodopseudomonas palustris} SCOP: d.108.1.1
Length = 172
Score = 35.9 bits (83), Expect = 0.014
Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 19/94 (20%)
Query: 13 AERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGK 72
+F + Q L+ ++ +G SL I+ + V Y G+
Sbjct: 52 EAKFAARLSGQLTLIATLQG----VPVGFASLKGP----------DHIDMLYVHPDYVGR 97
Query: 73 ELGKLLIAVLVKLAKHFQCYKLTLDFS-----FY 101
++G LI L KLA LT+D S F+
Sbjct: 98 DVGTTLIDALEKLAGARGALILTVDASDNAAEFF 131
>2ge3_A Probable acetyltransferase; structural GEN PSI, protein structure
initiative, midwest center for struc genomics, MCSG;
HET: ACO; 2.25A {Agrobacterium tumefaciens} SCOP:
d.108.1.1
Length = 170
Score = 35.8 bits (83), Expect = 0.015
Identities = 17/100 (17%), Positives = 32/100 (32%), Gaps = 12/100 (12%)
Query: 1 MSKLPTSNVFHFAERF-HRMKASQDYLVTVIEDTRTKQVIGTGSLILEQ--KFIHECALK 57
+S L + ++ V + + VIG + + H L
Sbjct: 35 LSFLEAPPLEAVRAFVLDMIENDHPQFVAIADG----DVIGWCDIRRQDRATRAHCGTL- 89
Query: 58 GKIEEVVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLTLD 97
+ + YR K LG L+ + A F +++ L
Sbjct: 90 ----GMGILPAYRNKGLGARLMRRTLDAAHEFGLHRIELS 125
>3pp9_A Putative streptothricin acetyltransferase; toxin production
resistance, infectious diseases, structural genomics;
HET: MSE ACO; 1.60A {Bacillus anthracis}
Length = 187
Score = 36.0 bits (83), Expect = 0.015
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 58 GKIEEVVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLTLD 97
IE++ VD YR +GK LIA + AK + L+
Sbjct: 101 AYIEDITVDKKYRTLGVGKRLIAQAKQWAKEGNMPGIMLE 140
>2bei_A Diamine acetyltransferase 2; SSAT2, BC011751, AAH11751, thialysine
N-acetyltransferase, structural genomics, protein
structure initiative, PSI; HET: ACO; 1.84A {Homo
sapiens} SCOP: d.108.1.1 PDB: 2q4v_A*
Length = 170
Score = 35.7 bits (82), Expect = 0.018
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 60 IEEVVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLTL 96
+E++ V YRG+ +G +I + ++A C + L
Sbjct: 91 LEDIYVMPEYRGQGIGSKIIKKVAEVALDKGCSQFRL 127
>2fe7_A Probable N-acetyltransferase; structural genomics, pseudomonas
aerugi PSI, protein structure initiative; 2.00A
{Pseudomonas aeruginosa ucbpp-pa14} SCOP: d.108.1.1
Length = 166
Score = 35.0 bits (81), Expect = 0.033
Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 12/64 (18%)
Query: 50 FIHECALKGK----IEEVVVDDTYRGKELGKLLIAVLVKLAKHFQCYKL---TLDF---- 98
F G+ +E++ V YRG G+ L+ L + A C +L LD+
Sbjct: 77 FYSYSTWLGRNGIYLEDLYVTPEYRGVGAGRRLLRELAREAVANDCGRLEWSVLDWNQPA 136
Query: 99 -SFY 101
FY
Sbjct: 137 IDFY 140
>3g8w_A Lactococcal prophage PS3 protein 05; APC61042, acetyltransferase,
staphylococcus epidermidis ATCC structural genomics;
HET: NHE FLC; 2.70A {Staphylococcus epidermidis atcc
12228}
Length = 169
Score = 34.8 bits (80), Expect = 0.035
Identities = 12/88 (13%), Positives = 26/88 (29%), Gaps = 12/88 (13%)
Query: 12 FAERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQ--KFIHECALKGKIEEVVVDDTY 69
+ +D +++ T +L H K +E V
Sbjct: 44 LKTILSNHTDYWNIFGAFEDD----ELVATCTLKQMNYVGKCH----KAILENNFVK--N 93
Query: 70 RGKELGKLLIAVLVKLAKHFQCYKLTLD 97
+ + + LI +++ AK L +
Sbjct: 94 NDEIVNRELINHIIQYAKEQNIETLMIA 121
>1qsm_A HPA2 histone acetyltransferase; protein-acetyl coenzyme A complex;
HET: ACO; 2.40A {Saccharomyces cerevisiae} SCOP:
d.108.1.1 PDB: 1qso_A
Length = 152
Score = 34.6 bits (80), Expect = 0.036
Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 17/85 (20%)
Query: 29 VIEDTRTKQVIGTGSLILEQKFIHECALKGK----IEEVVVDDTYRGKELGKLLIAVLVK 84
V ++ ++++IG + F H K I ++ VD+ R K G LI +
Sbjct: 56 VAVESSSEKIIG-----MINFFNHMTTWDFKDKIYINDLYVDENSRVKGAGGKLIQFVYD 110
Query: 85 LAKHFQCYKL---TLDF-----SFY 101
A + T + Y
Sbjct: 111 EADKLGTPSVYWCTDESNHRAQLLY 135
>3f8k_A Protein acetyltransferase; GCN5-related N-acetyltransferase; HET:
COA; 1.84A {Sulfolobus solfataricus P2}
Length = 160
Score = 34.6 bits (80), Expect = 0.037
Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 17/86 (19%)
Query: 14 ERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEE--VVVDDTYRG 71
E ++ +++D++ + E +V+G SL + E +VV YR
Sbjct: 43 EDAKKIASNEDHVTFLAEVDG--KVVGEASLH------KDG-------EFSLVVHRNYRT 87
Query: 72 KELGKLLIAVLVKLAKHFQCYKLTLD 97
+G LL+ L++ AK +
Sbjct: 88 LGIGTLLVKTLIEEAKKSGLSTVKFY 113
>3i9s_A Integron cassette protein; oyster POND, woods HOLE,
acetyltransferase, structural genomics, PSI-2, protein
structure initiative; 2.20A {Vibrio cholerae}
Length = 183
Score = 34.7 bits (80), Expect = 0.043
Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 12/64 (18%)
Query: 50 FIHECALKGK----IEEVVVDDTYRGKELGKLLIAVLVKLAKHFQCYKL---TLDF---- 98
I A K ++++ V + RGK +G L+ L +A C +L
Sbjct: 92 TIMFPAPKLSGQMYMKDLFVSSSARGKGIGLQLMKHLATIAITHNCQRLDWTAESTNPTA 151
Query: 99 -SFY 101
FY
Sbjct: 152 GKFY 155
>2ozh_A Hypothetical protein XCC2953; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2; 1.40A {Xanthomonas campestris PV}
Length = 142
Score = 33.8 bits (77), Expect = 0.058
Identities = 10/55 (18%), Positives = 22/55 (40%)
Query: 42 GSLILEQKFIHECALKGKIEEVVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLTL 96
G + + I + A + +V V +RG+ K L+ ++ + +L
Sbjct: 54 GRQVAFARVISDYATFAYLGDVFVLPEHRGRGYSKALMDAVMAHPDLQGLRRFSL 108
>2b5g_A Diamine acetyltransferase 1; structural genomics, PSI, protein
structure initiative, NEW research center for structural
genomics, nysgxrc; HET: ALY; 1.70A {Homo sapiens} SCOP:
d.108.1.1 PDB: 2b4d_A* 2jev_A* 2g3t_A 2f5i_A 2b3u_A
2b3v_A* 2b4b_A* 2b58_A* 2fxf_A* 3bj7_A* 3bj8_A*
Length = 171
Score = 33.8 bits (77), Expect = 0.080
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 60 IEEVVVDDTYRGKELGKLLIAVLVKLAKHFQCYKL 94
+E+ V YRG +G ++ L ++A +C +
Sbjct: 91 LEDFFVMSDYRGFGIGSEILKNLSQVAMRCRCSSM 125
>3efa_A Putative acetyltransferase; structural genom 2, protein structure
initiative, midwest center for structu genomics, MCSG;
2.42A {Lactobacillus plantarum WCFS1}
Length = 147
Score = 33.4 bits (77), Expect = 0.087
Identities = 7/40 (17%), Positives = 12/40 (30%)
Query: 58 GKIEEVVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLTLD 97
+ V YRG G+ L+ + A +
Sbjct: 72 MRFGRVCTRKAYRGHGWGRQLLTAAEEWATQRGFTHGEIH 111
>3ld2_A SMU.2055, putative acetyltransferase; HET: COA; 2.50A
{Streptococcus mutans}
Length = 197
Score = 33.3 bits (76), Expect = 0.13
Identities = 13/80 (16%), Positives = 30/80 (37%), Gaps = 12/80 (15%)
Query: 12 FAERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFI---HECALKGKIEEVVVDDT 68
+ + +++ +LV I+D +++G F H + V +
Sbjct: 70 KDQIIQKFESNTHFLVAKIKD----KIVGVLDYSSLYPFPSGQHIVTF-----GIAVAEK 120
Query: 69 YRGKELGKLLIAVLVKLAKH 88
R K +G+ L+ + + K
Sbjct: 121 ERRKGIGRALVQIFLNEVKS 140
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 33.2 bits (75), Expect = 0.16
Identities = 14/90 (15%), Positives = 33/90 (36%), Gaps = 17/90 (18%)
Query: 257 IGHPEAKTKLLDTARKLYTKKTQSVVQMKKMELEFCQSAASRAPSEAYMPILVNEAPSDF 316
I + T+ ++ RK ++ Q + L+ +A+ E +A D
Sbjct: 74 IAQADRLTQEPESIRKW--REEQ------RKRLQELDAASKVMEQE-----WREKAKKD- 119
Query: 317 NVDEYYRHLNTK--KLGQLMKKMELEFCQS 344
++E+ + + + K + + F Q
Sbjct: 120 -LEEWNQRQSEQVEKNKINNRIADKAFYQQ 148
>2i79_A Acetyltransferase, GNAT family; acetyl coenzyme *A, structur
genomics, PSI-2, protein structure initiative; HET: ACO;
2.10A {Streptococcus pneumoniae}
Length = 172
Score = 32.7 bits (75), Expect = 0.17
Identities = 14/89 (15%), Positives = 33/89 (37%), Gaps = 10/89 (11%)
Query: 12 FAERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQ--KFIHECALKGKIEEVVVDDTY 69
++ +S + + + ++ G ++ +Q + H L +V+ Y
Sbjct: 46 MEIFLNKQASSDNQITLLAFLN--GKIAGIVNITADQRKRVRHIGDL-----FIVIGKRY 98
Query: 70 RGKELGKLLIAVLVKLAK-HFQCYKLTLD 97
LG LL+ ++ A+ +L L
Sbjct: 99 WNNGLGSLLLEEAIEWAQASGILRRLQLT 127
>2fia_A Acetyltransferase; structural genomics, PSI, protein structu
initiative, midwest center for structural genomics,
MCSG; 2.60A {Enterococcus faecalis} SCOP: d.108.1.1
Length = 162
Score = 32.5 bits (74), Expect = 0.18
Identities = 11/62 (17%), Positives = 19/62 (30%), Gaps = 5/62 (8%)
Query: 36 KQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLT 95
+ + + +EQ+ ++ Y K G LL L K A K+
Sbjct: 59 EMIFSMATFCMEQEQDF-----VWLKRFATSPNYIAKGYGSLLFHELEKRAVWEGRRKMY 113
Query: 96 LD 97
Sbjct: 114 AQ 115
>1y9k_A IAA acetyltransferase; structural genomics, midwest center for
structural genomics bacillus cereus ATCC 14579, PSI;
2.39A {Bacillus cereus atcc 14579} SCOP: d.108.1.1
Length = 157
Score = 32.3 bits (74), Expect = 0.21
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 37 QVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLTL 96
VIG L+ + E I + V + +GK +GK L+ V+ AK + KL +
Sbjct: 47 SVIGVYVLLETRPKTME------IMNIAVAEHLQGKGIGKKLLRHAVETAKGYGMSKLEV 100
Query: 97 D 97
Sbjct: 101 G 101
>2gan_A 182AA long hypothetical protein; alpha-beta protein., structural
genomics, PSI, protein struc initiative; 2.10A
{Pyrococcus horikoshii} SCOP: d.108.1.1
Length = 190
Score = 32.4 bits (73), Expect = 0.25
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 58 GKIEEVVVDDTYRGKELGKLLIAVLVKLAKH--FQCYKLTLD 97
G IE VVD ++GK +G L+ VK + Y +T
Sbjct: 107 GLIEFFVVDPEFQGKGIGSTLLEFAVKRLRSLGKDPYVVTFP 148
>1yvk_A Hypothetical protein BSU33890; ALPHS-beta protein, structural
genomics, PSI, protein structure initiative; HET: COA;
3.01A {Bacillus subtilis subsp} SCOP: d.108.1.1
Length = 163
Score = 32.0 bits (73), Expect = 0.30
Identities = 11/61 (18%), Positives = 24/61 (39%), Gaps = 6/61 (9%)
Query: 37 QVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLTL 96
++ G L+ + E I + V ++ + K GK L+ ++ AK + +
Sbjct: 49 ELAGVYVLLKTRPQTVE------IVNIAVKESLQKKGFGKQLVLDAIEKAKKLGADTIEI 102
Query: 97 D 97
Sbjct: 103 G 103
>3d8p_A Acetyltransferase of GNAT family; NP_373092.1, structural GE joint
center for structural genomics, JCSG, protein structu
initiative; 2.20A {Staphylococcus aureus subsp}
Length = 163
Score = 32.0 bits (73), Expect = 0.33
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 36 KQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLT 95
+ ++GT LI + ALK ++ VD YR ++GK L+ ++ K +
Sbjct: 63 QNIVGTIGLIRLDN--NMSALK----KMFVDKGYRNLKIGKKLLDKVIMTCKEQNIDGIY 116
Query: 96 LD 97
L
Sbjct: 117 LG 118
>1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural
genomics, PSI, protein structure initiative; 1.70A
{Bacillus subtilis} SCOP: d.108.1.1
Length = 157
Score = 31.6 bits (72), Expect = 0.42
Identities = 15/85 (17%), Positives = 25/85 (29%), Gaps = 13/85 (15%)
Query: 12 FAERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRG 71
F E F +T + + G Q I V +R
Sbjct: 36 FFEHFQDT-----SFITSEHN----SMTGFLIGFQSQSDPET----AYIHFSGVHPDFRK 82
Query: 72 KELGKLLIAVLVKLAKHFQCYKLTL 96
++GK L V ++ K C ++
Sbjct: 83 MQIGKQLYDVFIETVKQRGCTRVKC 107
>2r7h_A Putative D-alanine N-acetyltransferase of GNAT FA; putative
acetyltransferase of the GNAT family; 1.85A
{Desulfovibrio desulfuricans subsp}
Length = 177
Score = 31.7 bits (72), Expect = 0.45
Identities = 13/85 (15%), Positives = 22/85 (25%), Gaps = 7/85 (8%)
Query: 12 FAERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRG 71
E A + V ED + G + + V +
Sbjct: 56 VDEHLMHGAACGYHFVFATEDDD---MAGYACYGPTPATEGTY----DLYWIAVAPHRQH 108
Query: 72 KELGKLLIAVLVKLAKHFQCYKLTL 96
LG+ L+A +V + L
Sbjct: 109 SGLGRALLAEVVHDVRLTGGRLLFA 133
>2i6c_A Putative acetyltransferase; GNAT family, structural genomic,
structur genomics, PSI-2, protein structure initiative;
HET: MSE EPE; 1.30A {Pseudomonas aeruginosa} SCOP:
d.108.1.1 PDB: 3pgp_A*
Length = 160
Score = 31.2 bits (71), Expect = 0.52
Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 9/76 (11%)
Query: 12 FAERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRG 71
A+ + + V V + QV+G + Q CA + ++V RG
Sbjct: 39 VAQLAAAIAERRGSTVAVHDG----QVLGFANFYQWQHG-DFCA----LGNMMVAPAARG 89
Query: 72 KELGKLLIAVLVKLAK 87
+ + LI V+ LA+
Sbjct: 90 LGVARYLIGVMENLAR 105
>3gy9_A GCN5-related N-acetyltransferase; YP_001815201.1, putative
acetyltransferase; HET: MSE COA SO4; 1.52A
{Exiguobacterium sibiricum 255-15} PDB: 3gya_A*
Length = 150
Score = 30.7 bits (69), Expect = 0.64
Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 7/49 (14%)
Query: 58 GKIEEVVVDDTYRGKELGKLLIAVLVKLAK-HFQCYKLTLD----FSFY 101
G+I V V R +G L+ ++ A + L L FY
Sbjct: 77 GRIRHVYVLPEARSHGIGTALLEKIMSEAFLTYDR--LVLYSEQADPFY 123
>1vhs_A Similar to phosphinothricin acetyltransferase; structural genomics,
unknown function; 1.80A {Bacillus subtilis} SCOP:
d.108.1.1
Length = 175
Score = 31.0 bits (71), Expect = 0.67
Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
Query: 13 AERFHRMKA-SQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVV-VDDTYR 70
+R ++ + V ED V S + F A E + +D+ R
Sbjct: 39 EDRMEWFSGHTESRPLYVAED-ENGNVAAWISF---ETFYGRPAYNKTAEVSIYIDEACR 94
Query: 71 GKELGKLLIAVLVKLAK 87
GK +G L+ +++A
Sbjct: 95 GKGVGSYLLQEALRIAP 111
>2oh1_A Acetyltransferase, GNAT family; YP_013287.1, structural genom joint
center for structural genomics, JCSG, protein structu
initiative; HET: MSE UNL; 1.46A {Listeria monocytogenes
str}
Length = 179
Score = 31.0 bits (70), Expect = 0.74
Identities = 9/38 (23%), Positives = 15/38 (39%)
Query: 60 IEEVVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLTLD 97
+ ++V + G L K +I KL + LD
Sbjct: 106 LHRIMVSRAFSGISLSKQMIYFAEKLGIEMSVPFIRLD 143
>1cjw_A Protein (serotonin N-acetyltransferase); HET: COT; 1.80A {Ovis
aries} SCOP: d.108.1.1 PDB: 1b6b_A
Length = 166
Score = 30.5 bits (69), Expect = 0.84
Identities = 13/96 (13%), Positives = 30/96 (31%), Gaps = 16/96 (16%)
Query: 11 HFAERFHRMKASQDYLVTVIEDTRTKQVIG--TGSLILEQKFIHECALKGK-------IE 61
+ L +E +++ GSL E++ E + +
Sbjct: 40 EVQHFLT--LCPELSLGWFVEG----RLVAFIIGSLWDEERLTQESLALHRPRGHSAHLH 93
Query: 62 EVVVDDTYRGKELGKLLI-AVLVKLAKHFQCYKLTL 96
+ V ++R + G +L+ L + + L
Sbjct: 94 ALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAVL 129
>3kkw_A Putative uncharacterized protein; acetyltransferase, GNAT family,
structural genomics, PSI, protein structure initiative;
1.41A {Pseudomonas aeruginosa PAO1}
Length = 182
Score = 30.9 bits (70), Expect = 0.89
Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 10/76 (13%)
Query: 13 AERF-HRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRG 71
+ + + V V + QV+G + + + CAL ++V RG
Sbjct: 61 VAQLAAAIAERRGSTVAVHDG----QVLGFANF-YQWQHGDFCAL----GNMMVAPAARG 111
Query: 72 KELGKLLIAVLVKLAK 87
+ + LI V+ LA+
Sbjct: 112 LGVARYLIGVMENLAR 127
>4fd5_A Arylalkylamine N-acetyltransferase 2; GNAT; 1.64A {Aedes aegypti}
PDB: 4fd6_A
Length = 222
Score = 30.9 bits (69), Expect = 0.94
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 63 VVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLTLDFSFYTCWKL 106
+ VD +RGK L K LI +LA + D + ++
Sbjct: 136 LSVDSRFRGKGLAKKLIEKSEELALDRGFQVMKTDATGAFSQRV 179
>2ob0_A Human MAK3 homolog; acetyltransferase, structural genomics
consortium, SGC; HET: ACO; 1.80A {Homo sapiens} PDB:
2psw_A* 3tfy_A*
Length = 170
Score = 30.4 bits (69), Expect = 1.0
Identities = 12/79 (15%), Positives = 25/79 (31%), Gaps = 8/79 (10%)
Query: 19 MKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGKELG-KL 77
++ + + D +G ++ + + I + YR +G K+
Sbjct: 41 LEVGELAKLAYFND----IAVGAVCCRVDH---SQNQKRLYIMTLGCLAPYRRLGIGTKM 93
Query: 78 LIAVLVKLAKHFQCYKLTL 96
L VL K + L
Sbjct: 94 LNHVLNICEKDGTFDNIYL 112
>2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha
acetylation, GCN5-N-acetyltransferase, ribosomal Pro
acetyltransferase, GNAT; HET: COA; 2.4A {Salmonella
typhimurium} PDB: 2cnm_A* 2cns_A*
Length = 160
Score = 29.9 bits (68), Expect = 1.3
Identities = 8/34 (23%), Positives = 17/34 (50%)
Query: 63 VVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLTL 96
+ VD ++ + LG++L+ L+ + L L
Sbjct: 69 IAVDPDFQRRGLGRMLLEHLIDELETRGVVTLWL 102
>2fl4_A Spermine/spermidine acetyltransferase; structural genomics, protein
structure initiative, midwest center for structural
genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP:
d.108.1.1
Length = 149
Score = 30.1 bits (68), Expect = 1.3
Identities = 16/79 (20%), Positives = 31/79 (39%), Gaps = 9/79 (11%)
Query: 20 KASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGKELGK-LL 78
++ I D Q+IG Q ++ ++D ++G+ GK
Sbjct: 41 DQFPEWESAGIYDG--NQLIGYAMYGRWQDGRVW------LDRFLIDQRFQGQGYGKAAC 92
Query: 79 IAVLVKLAKHFQCYKLTLD 97
+++KL + +Q KL L
Sbjct: 93 RLLMLKLIEKYQTNKLYLS 111
>1r57_A Conserved hypothetical protein; GCN5, N-acetyltransferase,
structural genomics, PSI, protein structure initiative;
NMR {Staphylococcus aureus} SCOP: d.108.1.1 PDB: 2h5m_A*
Length = 102
Score = 29.0 bits (65), Expect = 1.3
Identities = 12/76 (15%), Positives = 23/76 (30%), Gaps = 24/76 (31%)
Query: 60 IEEVVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLTLDFSFYTCWKLSYIFLMVIRSQVL 119
I+ V D G+ +GK L+ +V+ A+ K+ +C
Sbjct: 38 IDHTGVSDELGGQGVGKKLLKAVVEHARE-NNLKIIA-----SCS--------------- 76
Query: 120 KMVYTAGYLIGHPEAK 135
+ L +
Sbjct: 77 ---FAKHMLEKEDSYQ 89
>2aj6_A Hypothetical protein MW0638; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2; HET: MSE UNL; 1.63A {Staphylococcus aureus subsp}
SCOP: d.108.1.1
Length = 159
Score = 29.8 bits (67), Expect = 1.7
Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 12/83 (14%)
Query: 17 HRMKASQDYLVTVIEDTRTKQVIG--TGSLILEQKFIHECALKGKIEEVVVDDTYRGKEL 74
R++ + D + + E+ Q+I G E+ ++ IE + V+ +R +
Sbjct: 58 SRLEHTNDKIY-IYENE--GQLIAFIWGHFSNEKSMVN-------IELLYVEPQFRKLGI 107
Query: 75 GKLLIAVLVKLAKHFQCYKLTLD 97
L L K AK +++
Sbjct: 108 ATQLKIALEKWAKTMNAKRISNT 130
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling;
HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB:
4avb_A* 4avc_A*
Length = 333
Score = 30.4 bits (68), Expect = 2.0
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 63 VVVDDTYRGKELGKLLIAVLVKLAK 87
V D Y+G+ +G LI L A+
Sbjct: 238 FTVADAYQGRGIGSFLIGALSVAAR 262
>3qb8_A A654L protein; GNAT N-acetyltransferase, acetyltransferase, COA,
spermine, spermidine, transferase; HET: COA; 1.50A
{Paramecium bursaria chlorella virus 1}
Length = 197
Score = 29.9 bits (67), Expect = 2.0
Identities = 5/37 (13%), Positives = 12/37 (32%)
Query: 63 VVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLTLDFS 99
+ GK L L+ ++ + + D +
Sbjct: 113 FAIGSEVTGKGLATKLLKKTIEESSSHGFKYIYGDCT 149
>4fd4_A Arylalkylamine N-acetyltransferase like 5B; GNAT; 1.95A {Aedes
aegypti}
Length = 217
Score = 29.8 bits (66), Expect = 2.3
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 63 VVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLTLDFS 99
+ VD TYRG LG+ L+ + L+K ++ DF+
Sbjct: 132 LAVDPTYRGHSLGQRLLQFQMDLSKKLGFKAISGDFT 168
>3ddd_A Putative acetyltransferase; NP_142035.1, structural genomi center
for structural genomics, JCSG, protein structure INI
PSI-2; HET: COA; 2.25A {Pyrococcus horikoshii}
Length = 288
Score = 29.9 bits (67), Expect = 2.4
Identities = 12/73 (16%), Positives = 29/73 (39%), Gaps = 12/73 (16%)
Query: 25 YLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGKELGKLLIAVLVK 84
L+ ++D + +G G + K I + V Y+ + +G + L++
Sbjct: 65 CLLAFLKD----EPVGMGCIFFYNKQAW-------IGLMGVKKAYQRRGIGTEVFRRLLE 113
Query: 85 LAKHFQCYKLTLD 97
+ + + + LD
Sbjct: 114 IGRR-KVDTIRLD 125
>1tiq_A Protease synthase and sporulation negative regulatory protein PAI
1; alpha-beta protein, structural genomics, PSI; HET:
COA; 1.90A {Bacillus subtilis} SCOP: d.108.1.1
Length = 180
Score = 29.3 bits (66), Expect = 2.6
Identities = 12/85 (14%), Positives = 34/85 (40%), Gaps = 3/85 (3%)
Query: 13 AERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALK-GKIEEVVVDDTYRG 71
E+ + ++ I ++ G + ++ E + +IE + + ++++
Sbjct: 47 TEQLEKELSNMSSQFFFIYFD--HEIAGYVKVNIDDAQSEEMGAESLEIERIYIKNSFQK 104
Query: 72 KELGKLLIAVLVKLAKHFQCYKLTL 96
LGK L+ +++A + L
Sbjct: 105 HGLGKHLLNKAIEIALERNKKNIWL 129
>3bln_A Acetyltransferase GNAT family; NP_981174.1, structural genom
joint center for structural genomics, JCSG, protein
structu initiative, PSI-2; HET: MSE MRD GOL; 1.31A
{Bacillus cereus}
Length = 143
Score = 28.8 bits (65), Expect = 2.6
Identities = 8/82 (9%), Positives = 24/82 (29%), Gaps = 13/82 (15%)
Query: 9 VFHFAER---FHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVV 65
V R ++ ++ + G + +C + ++V
Sbjct: 23 VIGNDSRRNYIKHSIDEGRCVIVKEDN----SISGFLTY---DTNFFDCTF---LSLIIV 72
Query: 66 DDTYRGKELGKLLIAVLVKLAK 87
T R + L++ ++ +
Sbjct: 73 SPTKRRRGYASSLLSYMLSHSP 94
>3dr6_A YNCA; acetyltransferase, csgid target, essential gene, IDP00086,
structural genomics, center for STRU genomics of
infectious diseases; HET: MSE; 1.75A {Salmonella
typhimurium} PDB: 3dr8_A*
Length = 174
Score = 29.1 bits (66), Expect = 3.2
Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 12/80 (15%)
Query: 13 AERFHRMKASQD----YLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEE-VVVDD 67
R +A Q LV+ V G S + + +E V V
Sbjct: 40 DNRLAWYEARQLLGYPVLVSEENG----VVTGYASF---GDWRSFDGFRYTVEHSVYVHP 92
Query: 68 TYRGKELGKLLIAVLVKLAK 87
++GK LG+ L++ L+ A+
Sbjct: 93 AHQGKGLGRKLLSRLIDEAR 112
>2x7b_A N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulfolobus
solfataricus}
Length = 168
Score = 28.9 bits (65), Expect = 3.3
Identities = 14/80 (17%), Positives = 32/80 (40%), Gaps = 10/80 (12%)
Query: 23 QDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEE-----VVVDDTYRGKELG-K 76
+ V ++++ V+G +E F + L + + + V + YR K +
Sbjct: 52 LAFFVAIVDN----SVVGYIMPRIEWGFSNIKQLPSLVRKGHVVSIAVLEEYRRKGIATT 107
Query: 77 LLIAVLVKLAKHFQCYKLTL 96
LL A + + + ++ L
Sbjct: 108 LLEASMKSMKNDYNAEEIYL 127
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate;
VHS, FYVE, zinc finger, superhelix, transferase; HET:
CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2
g.50.1.1
Length = 220
Score = 28.6 bits (63), Expect = 5.0
Identities = 11/102 (10%), Positives = 22/102 (21%)
Query: 14 ERFHRMKASQDYLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGKE 73
H +++ + +LE A + + + DT +
Sbjct: 75 APVHEEVFTKENCEMFSSFLESTPHENVRQKMLELVQTWAYAFRSSDKYQAIKDTMTILK 134
Query: 74 LGKLLIAVLVKLAKHFQCYKLTLDFSFYTCWKLSYIFLMVIR 115
L + F C + F R
Sbjct: 135 AKGHTFPELREADAMFTADTAPNWADGRVCHRCRVEFTFTNR 176
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 28.4 bits (62), Expect = 5.3
Identities = 10/52 (19%), Positives = 13/52 (25%), Gaps = 28/52 (53%)
Query: 133 EAKT-KLLDTARKLYTKKTQSVVQMKKMELEFCQSAASRAPSEAYMPIL-VN 182
E + K L + KLY A A P L +
Sbjct: 18 EKQALKKLQASLKLY------------------------ADDSA--PALAIK 43
Score = 28.4 bits (62), Expect = 5.3
Identities = 10/52 (19%), Positives = 13/52 (25%), Gaps = 28/52 (53%)
Query: 261 EAKT-KLLDTARKLYTKKTQSVVQMKKMELEFCQSAASRAPSEAYMPIL-VN 310
E + K L + KLY A A P L +
Sbjct: 18 EKQALKKLQASLKLY------------------------ADDSA--PALAIK 43
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty
acid synthase, acyl-carrier-protein, beta-ketoacyl RED
beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces
cerevisiae}
Length = 1688
Score = 29.1 bits (65), Expect = 5.4
Identities = 8/39 (20%), Positives = 13/39 (33%), Gaps = 2/39 (5%)
Query: 472 DLGIKWPNDLYVNGNVKLGGIIVTSSI--LSTFESQMAV 508
GI P ++Y +V G S + +S
Sbjct: 1026 ASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKD 1064
>1l1l_A Ribonucleoside triphosphate reductase; 10-stranded alpha-beta
barrel, central finger loop, oxidoreductase; 1.75A
{Lactobacillus leichmannii} SCOP: c.7.1.4
Length = 739
Score = 29.0 bits (63), Expect = 5.7
Identities = 7/30 (23%), Positives = 12/30 (40%)
Query: 562 EIYDLYYKHWLHNNVNVTVVSERGEAQQVK 591
+W N V+ T+ + E QV+
Sbjct: 633 ATQAFLQTYWSDNAVSCTITFQDSEGDQVE 662
>1yr0_A AGR_C_1654P, phosphinothricin acetyltransferase; structural
genomics, protein structure initiative, NYSGXRC, PSI;
2.00A {Agrobacterium tumefaciens str} SCOP: d.108.1.1
Length = 175
Score = 27.9 bits (63), Expect = 6.2
Identities = 16/80 (20%), Positives = 26/80 (32%), Gaps = 12/80 (15%)
Query: 13 AERFHRMKASQD----YLVTVIEDTRTKQVIGTGSLILEQKFIHECALKGKIEEVV-VDD 67
R A +V +++ +V G S + + E V V
Sbjct: 41 ENRKDWFAARTSRGFPVIVAILDG----KVAGYASY---GDWRAFDGYRHTREHSVYVHK 93
Query: 68 TYRGKELGKLLIAVLVKLAK 87
RG +GK L+ L+ A
Sbjct: 94 DARGHGIGKRLMQALIDHAG 113
>2e5a_A Lipoyltransferase 1; lipoyl-AMP, ligase; HET: LAQ; 2.10A {Bos
taurus} PDB: 3a7u_A
Length = 347
Score = 28.8 bits (64), Expect = 6.2
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 460 IVLAVKSFNQDIDLGIKWPNDLYVNGNVKLGG 491
+V A+K+ + +D+ DL ++G K+ G
Sbjct: 107 VVRALKAVHPHLDVQATKRFDLLLDGQFKISG 138
>4fd7_A Putative arylalkylamine N-acetyltransferase 7; GNAT, COA binding;
1.80A {Aedes aegypti}
Length = 238
Score = 28.3 bits (62), Expect = 7.7
Identities = 7/37 (18%), Positives = 15/37 (40%)
Query: 63 VVVDDTYRGKELGKLLIAVLVKLAKHFQCYKLTLDFS 99
+ VD YRG+ + ++ + L + F+
Sbjct: 153 LSVDPKYRGRGIATEILRARIPLCRAVGLKLSATCFT 189
>2q7b_A Acetyltransferase, GNAT family; NP_689019.1, structural GEN joint
center for structural genomics, JCSG; HET: MSE FLC;
2.00A {Streptococcus agalactiae 2603V}
Length = 181
Score = 27.5 bits (61), Expect = 9.1
Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 8/63 (12%)
Query: 37 QVIGTGSLILEQKFIHECALKGKIEEVVVDDTYRGKE--LGKLLIAVLVKLAKHFQCYKL 94
+V+G+ +L+ LK + YRG LG+ L + A+ + ++
Sbjct: 81 KVVGSIALLRIDD--KTAVLK----KFFTYPKYRGNPVRLGRKLFERFMLFARASKFTRI 134
Query: 95 TLD 97
LD
Sbjct: 135 VLD 137
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.320 0.134 0.387
Gapped
Lambda K H
0.267 0.0478 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 9,370,084
Number of extensions: 556644
Number of successful extensions: 1108
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1071
Number of HSP's successfully gapped: 111
Length of query: 638
Length of database: 6,701,793
Length adjustment: 100
Effective length of query: 538
Effective length of database: 3,909,693
Effective search space: 2103414834
Effective search space used: 2103414834
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.5 bits)