Query psy6923
Match_columns 113
No_of_seqs 151 out of 1115
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 21:55:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6923.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6923hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2iqy_A Phosphatidylethanolamin 100.0 9.3E-30 3.2E-34 187.6 8.1 96 1-98 71-169 (190)
2 2jyz_A CG7054-PA, GH14779P, PE 100.0 2.2E-29 7.4E-34 184.0 7.7 95 1-98 60-159 (179)
3 3axy_A Protein heading DATE 3A 99.9 1.4E-27 4.8E-32 173.3 7.7 90 1-98 71-161 (170)
4 2gzq_A Phosphatidylethanolamin 99.9 4.2E-27 1.4E-31 174.7 6.7 92 1-92 83-187 (200)
5 1wko_A Terminal flower 1 prote 99.9 5.6E-27 1.9E-31 171.5 6.3 91 1-98 75-166 (180)
6 1wpx_B Carboxypeptidase Y inhi 99.9 4.8E-26 1.6E-30 170.5 6.5 91 1-92 94-207 (220)
7 1fux_A Hypothetical 19.5 kDa p 99.8 2.5E-19 8.6E-24 129.6 3.7 59 1-65 52-132 (166)
8 3n08_A Putative phosphatidylet 99.7 2.7E-18 9.1E-23 122.9 7.4 61 1-65 48-121 (153)
9 1fjj_A Hypothetical 17.1 kDa p 99.7 1.7E-18 5.6E-23 124.5 4.0 58 1-65 51-129 (159)
10 2evv_A Hypothetical protein HP 99.6 3.8E-16 1.3E-20 116.6 2.8 59 1-65 78-170 (207)
No 1
>2iqy_A Phosphatidylethanolamine-binding protein 1; alpha-beta, hydrolase inhibitor; 1.40A {Rattus norvegicus} PDB: 2iqx_A 1b7a_A* 1a44_A 1beh_A 1bd9_A 2l7w_A 2qyq_A* 1kn3_A
Probab=99.96 E-value=9.3e-30 Score=187.63 Aligned_cols=96 Identities=32% Similarity=0.551 Sum_probs=84.2
Q ss_pred CcCCCCCCCCCCCCCCeEEEEEeCcCCCCCCCCceeecccCCCCCCCCCCCcEEEEEeeeecCCCCCccccc---ccCCC
Q psy6923 1 MVDPDAPSRKDQKLSPILHYLVGNIPGHDVNKGHIIADYRGAMPPKGSGRTSSQWITEVKQLGNSGTINQSR---AAGFF 77 (113)
Q Consensus 1 mvDPDaP~~~~~~~~~~lHwlv~nI~~~~~~~g~~~~~Y~gP~Pp~g~g~HRY~f~lyf~Q~~~~~~~~~~r---~~~~~ 77 (113)
|+|||+|++.++++++|+|||++||+++++..|+.+++|+||+||+|+|.|||+|+|| +|+..+ .+.+.+ .....
T Consensus 71 m~DpDaP~~~~p~~~~~~HWlv~nIp~~~~~~G~~~~~Y~gP~Pp~g~g~HRY~f~ly-~q~~~l-~~~~~~l~~~~~~~ 148 (190)
T 2iqy_A 71 LTDPDAPSRKDPKFREWHHFLVVNMKGNDISSGTVLSEYVGSGPPKDTGLHRYVWLVY-EQEQPL-NCDEPILSNKSGDN 148 (190)
T ss_dssp EEESSSSCSSSCTTCCEEEEEEEEEETTBGGGSEEEECCCCCCCCTTSCCEEEEEEEE-ECSSCC-CCCSCCBCTTCCTT
T ss_pred EECCCCCCCCCCCcCCEEEEEEeCCChhccccCccccceeCCCCcCCCCceEEEEEEE-EeCCcc-CcchhhccCCCccc
Confidence 8999999999999999999999999999888999999999999999999999999995 999876 333212 34568
Q ss_pred CCCcCHhHHHHHHcCCCCCCC
Q psy6923 78 QPGVKVCHIIADYRGAMPPKG 98 (113)
Q Consensus 78 R~~F~vr~F~~k~~~~~~~~G 98 (113)
|.+|++++|+++|++..|.||
T Consensus 149 R~~F~~~~F~~~~~Lg~pVA~ 169 (190)
T 2iqy_A 149 RGKFKVESFRKKYHLGAPVAG 169 (190)
T ss_dssp CSSCCHHHHHHHTTCCSCSEE
T ss_pred CCCcCHHHHHHHhCCCCeeEE
Confidence 999999999999998766654
No 2
>2jyz_A CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular modeling, chemical shift variations, titration, unknown function; NMR {Drosophila melanogaster}
Probab=99.96 E-value=2.2e-29 Score=183.99 Aligned_cols=95 Identities=33% Similarity=0.470 Sum_probs=83.8
Q ss_pred CcCCCCCCCCCCCCCCeEEEEEeCcCCC--CCCCCceeecccCCCCCCCCCCCcEEEEEeeeecCCCCCccccc---ccC
Q psy6923 1 MVDPDAPSRKDQKLSPILHYLVGNIPGH--DVNKGHIIADYRGAMPPKGSGRTSSQWITEVKQLGNSGTINQSR---AAG 75 (113)
Q Consensus 1 mvDPDaP~~~~~~~~~~lHwlv~nI~~~--~~~~g~~~~~Y~gP~Pp~g~g~HRY~f~lyf~Q~~~~~~~~~~r---~~~ 75 (113)
|+|||+|++.++++++|+|||++|||++ ++..|+.+++|.||+|++|+|.|||+|+|| +|+..+. ...+ ...
T Consensus 60 m~DpDaP~~~~p~~~~~~HWlv~nIp~~~~~l~~g~~~~~Y~gP~Pp~g~g~HRY~f~ly-~q~~~l~--~~~~l~~~~~ 136 (179)
T 2jyz_A 60 MVDPDAPTRQDPKYREILHWSVVNIPGSNENPSGGHSLADYVGSGPPKDTGLHRYIFLLY-RQENKIE--ETPTISNTTR 136 (179)
T ss_dssp EECCCSSCTTCCSSCCCSCCEEECCCTTSSSTTSSEEEECCCSCCSCGGGCSEEEEEEEE-EECSCCC--CSSCBCTTCC
T ss_pred EeCCCCCCCccCCCccEEEEEEECCCCCccccCcccccccccCCCCCCCCCceEEEEEEE-EcCCcCC--chhhccCCCc
Confidence 8999999999999999999999999998 788899999999999999999999999995 9998763 2111 245
Q ss_pred CCCCCcCHhHHHHHHcCCCCCCC
Q psy6923 76 FFQPGVKVCHIIADYRGAMPPKG 98 (113)
Q Consensus 76 ~~R~~F~vr~F~~k~~~~~~~~G 98 (113)
..|.+|++++|+++|++..|+||
T Consensus 137 ~~R~~F~~~~F~~~~~Lg~pvA~ 159 (179)
T 2jyz_A 137 TGRLNFNARDFAAKHGLGEPIAA 159 (179)
T ss_dssp SSSCCCCTHHHHHHTTCCSCSEE
T ss_pred ccCCCcCHHHHHHHhCCCCccEE
Confidence 68999999999999999777776
No 3
>3axy_A Protein heading DATE 3A; phosphatidylethanolamine-binding protein, 14-3-3 protein, BZ protein, floral induction; HET: SEP; 2.40A {Oryza sativa japonica group} PDB: 1wkp_A
Probab=99.94 E-value=1.4e-27 Score=173.31 Aligned_cols=90 Identities=30% Similarity=0.468 Sum_probs=78.8
Q ss_pred CcCCCCCCCCCCCCCCeEEEEEeCcCCC-CCCCCceeecccCCCCCCCCCCCcEEEEEeeeecCCCCCcccccccCCCCC
Q psy6923 1 MVDPDAPSRKDQKLSPILHYLVGNIPGH-DVNKGHIIADYRGAMPPKGSGRTSSQWITEVKQLGNSGTINQSRAAGFFQP 79 (113)
Q Consensus 1 mvDPDaP~~~~~~~~~~lHwlv~nI~~~-~~~~g~~~~~Y~gP~Pp~g~g~HRY~f~lyf~Q~~~~~~~~~~r~~~~~R~ 79 (113)
|+|||+|++.++++++|+|||++||+++ +...|+++++|.||+|+ +|.|||+|+|| +|+..+ .+.+ ...|.
T Consensus 71 m~DpDaP~~~~p~~~~~~HWlv~nIp~~~~~~~G~~~~~Y~gP~Pp--~G~HRY~f~ly-~q~~~l-~~~~----p~~R~ 142 (170)
T 3axy_A 71 MVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMSYESPRPT--MGIHRLVFVLF-QQLGRQ-TVYA----PGWRQ 142 (170)
T ss_dssp EEETTCSCTTSCTTCSEEEEEEEEEETTSBGGGSEEEECCCCCCCC--SSCEEEEEEEE-ECSSCC-CCCC----CSCST
T ss_pred EECCCCCCCccCCCccEEEEEEeCCCCCccccCCceeceecCCCCC--CCcEEEEEEEE-ecCCcc-CCCC----ccccC
Confidence 8999999999999999999999999998 56778899999999999 56899999995 999876 3332 35899
Q ss_pred CcCHhHHHHHHcCCCCCCC
Q psy6923 80 GVKVCHIIADYRGAMPPKG 98 (113)
Q Consensus 80 ~F~vr~F~~k~~~~~~~~G 98 (113)
+|++++|+++|++..|.||
T Consensus 143 ~F~~~~F~~~~~Lg~Pva~ 161 (170)
T 3axy_A 143 NFNTKDFAELYNLGSPVAA 161 (170)
T ss_dssp TCCHHHHHHHTTCCSCSEE
T ss_pred CcCHHHHHHHhCCCCcEEE
Confidence 9999999999998877665
No 4
>2gzq_A Phosphatidylethanolamine-binding protein; structural genomics, PSI, protein structure initiative; HET: MSE; 1.30A {Plasmodium vivax} PDB: 2r77_A
Probab=99.94 E-value=4.2e-27 Score=174.72 Aligned_cols=92 Identities=25% Similarity=0.387 Sum_probs=76.9
Q ss_pred CcCCCCCCCCCCCCCCeEEEEEeCcCCCCCCCCc-----eeecccCCCCCCCCCCCcEEEEEe-eeecCCCCC--ccccc
Q psy6923 1 MVDPDAPSRKDQKLSPILHYLVGNIPGHDVNKGH-----IIADYRGAMPPKGSGRTSSQWITE-VKQLGNSGT--INQSR 72 (113)
Q Consensus 1 mvDPDaP~~~~~~~~~~lHwlv~nI~~~~~~~g~-----~~~~Y~gP~Pp~g~g~HRY~f~ly-f~Q~~~~~~--~~~~r 72 (113)
|+|||||++.++++++|+|||++|||++++..|. .+++|+||+||+|+|.|||+|+|| |+|+.+... ++..+
T Consensus 83 m~DPDaP~~~~~~~~~~~HWlv~nIp~~~~~~g~~~~~~~~~~Y~gP~Pp~g~g~HRYvF~l~~fkQ~~~~~~~~~p~~~ 162 (200)
T 2gzq_A 83 MIDPDFPSRRRPDGRDYVHWAVSGIKSKELVKGTDKNCITLLPYVGPSIKKGTGLHRISFILSLVKEENKGNVTGVPLYR 162 (200)
T ss_dssp EEETTCSCSSCCTTCSEEEEEEEEECSSEEETTCCTTCEEEECCCCCCCCTTSCCEEEEEEEEEEEGGGTTCBTTBCCCC
T ss_pred EECCCCCCCCCCCCCCEEEEEEeCCCcCcccCCccCCCcceeeeeCCCCcCCCCcceEEEEEEEecccCcccccccCccc
Confidence 8999999999999999999999999998665554 799999999999999999999996 799987621 11111
Q ss_pred -ccCCCCCCcCHh----HHHHHHcC
Q psy6923 73 -AAGFFQPGVKVC----HIIADYRG 92 (113)
Q Consensus 73 -~~~~~R~~F~vr----~F~~k~~~ 92 (113)
....+|.+|+++ +|++++++
T Consensus 163 ~~~~~~R~~F~~~~gv~~F~~~~gL 187 (200)
T 2gzq_A 163 GEHYITRVKFNNCQSAYNVIQMNDM 187 (200)
T ss_dssp CGGGCCTTHHHHTCCHHHHHHHTTC
T ss_pred cccccccCccccchhhHHHHHHcCC
Confidence 334589999987 89999976
No 5
>1wko_A Terminal flower 1 protein; CIS-peptide, PEBP, signaling protein; 1.80A {Arabidopsis thaliana} PDB: 1qou_A
Probab=99.93 E-value=5.6e-27 Score=171.50 Aligned_cols=91 Identities=24% Similarity=0.353 Sum_probs=78.0
Q ss_pred CcCCCCCCCCCCCCCCeEEEEEeCcCCCC-CCCCceeecccCCCCCCCCCCCcEEEEEeeeecCCCCCcccccccCCCCC
Q psy6923 1 MVDPDAPSRKDQKLSPILHYLVGNIPGHD-VNKGHIIADYRGAMPPKGSGRTSSQWITEVKQLGNSGTINQSRAAGFFQP 79 (113)
Q Consensus 1 mvDPDaP~~~~~~~~~~lHwlv~nI~~~~-~~~g~~~~~Y~gP~Pp~g~g~HRY~f~lyf~Q~~~~~~~~~~r~~~~~R~ 79 (113)
|+|||+|++.++++++|+|||++|||++. ...|..+++|.||+|+ +|.|||+|+|| +|+..+ .+.+ ....|.
T Consensus 75 m~DPDaP~~~~p~~~~~~HWlv~nIp~~~~~~~G~~~~~Y~gP~Pp--~G~HRYvf~ly-~q~~~l-~~~~---~~~~R~ 147 (180)
T 1wko_A 75 MIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPS--IGIHRFVFVLF-RQKQRR-VIFP---NIPSRD 147 (180)
T ss_dssp EEECSCSBTTBCTTCCEEEEEEEEEETTSBGGGSEEEECCCCCCCC--SSCEEEEEEEE-ECCTTC-CCCC---CCCCST
T ss_pred EeCCCCCCCccCCCccEEEEEEeccCcCccccCCceeeeeCCCCCC--CCceEEEEEEE-ecCCcc-CCCC---CccccC
Confidence 89999999999999999999999999883 4568999999999998 66899999995 999876 3222 245899
Q ss_pred CcCHhHHHHHHcCCCCCCC
Q psy6923 80 GVKVCHIIADYRGAMPPKG 98 (113)
Q Consensus 80 ~F~vr~F~~k~~~~~~~~G 98 (113)
+|++++|+++|++..|.||
T Consensus 148 ~F~~~~F~~~~~Lg~PVa~ 166 (180)
T 1wko_A 148 HFNTRKFAVEYDLGLPVAA 166 (180)
T ss_dssp TCCHHHHHHHTTCCSEEEE
T ss_pred CcCHHHHHHHhCCCCcEEE
Confidence 9999999999998776654
No 6
>1wpx_B Carboxypeptidase Y inhibitor; carboxypeptidase inhibitor, serine proteinase inhibitor, Pro inhibitor complex; HET: NAG NDG; 2.70A {Saccharomyces cerevisiae} SCOP: b.17.1.1
Probab=99.92 E-value=4.8e-26 Score=170.53 Aligned_cols=91 Identities=30% Similarity=0.442 Sum_probs=74.0
Q ss_pred CcCCCCCCCCCCCCCCeEEEEEeCcCCCC---------C--------CCC-ceeecccCCCCCCCCCCCcEEEEEeeeec
Q psy6923 1 MVDPDAPSRKDQKLSPILHYLVGNIPGHD---------V--------NKG-HIIADYRGAMPPKGSGRTSSQWITEVKQL 62 (113)
Q Consensus 1 mvDPDaP~~~~~~~~~~lHwlv~nI~~~~---------~--------~~g-~~~~~Y~gP~Pp~g~g~HRY~f~lyf~Q~ 62 (113)
|+|||+|++.++++++|+||+++|||++. + +.+ ...++|.|||||+|+|.|||+|+|| +|+
T Consensus 94 m~DpDaP~~~~p~~~~~~HW~v~nIp~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~Y~gP~Pp~g~g~HRY~f~ly-a~~ 172 (220)
T 1wpx_B 94 MTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLY-KQP 172 (220)
T ss_dssp EEESSSSCSSCCTTCSEEEEEEEEEEECC---------CCEEEEEEECTTCEEEECCCCCCCCTTSCCEEEEEEEE-ECC
T ss_pred EECCCCCCCCCCCcCcEEEEEEEccCCCccccccccCCCCccceEeecCCccccccccCCCCccCCCCceEEEEEE-ecC
Confidence 79999999999999999999999999861 1 235 6789999999999999999999996 999
Q ss_pred CCCCC----ccccc-ccCCCCCCcCHhHHHHHHcC
Q psy6923 63 GNSGT----INQSR-AAGFFQPGVKVCHIIADYRG 92 (113)
Q Consensus 63 ~~~~~----~~~~r-~~~~~R~~F~vr~F~~k~~~ 92 (113)
..+.. ....| .++.+|..|++|+|+++|++
T Consensus 173 ~~l~~~~~~~~~~R~~f~~~~~~f~~~~F~~~~~L 207 (220)
T 1wpx_B 173 KGVDSSKFSKIKDRPNWGYGTPATGVGKWAKENNL 207 (220)
T ss_dssp TTCCGGGSCCCCCSBGGGCCSSSCSHHHHHHTTTC
T ss_pred CcCCccccCCcccccCCCccccchhHHHHHHHhCC
Confidence 87521 12233 44555666669999999987
No 7
>1fux_A Hypothetical 19.5 kDa protein in EMRE-RUS intergenic region; beta protein, unknown function; 1.81A {Escherichia coli} SCOP: b.17.1.2
Probab=99.76 E-value=2.5e-19 Score=129.56 Aligned_cols=59 Identities=32% Similarity=0.400 Sum_probs=48.8
Q ss_pred CcCCCCCCCCCCCCCCeEEEEEeCcCCC--CCCCCc-------------------eeecccCCCCCCCCCCCcEEEEEee
Q psy6923 1 MVDPDAPSRKDQKLSPILHYLVGNIPGH--DVNKGH-------------------IIADYRGAMPPKGSGRTSSQWITEV 59 (113)
Q Consensus 1 mvDPDaP~~~~~~~~~~lHwlv~nI~~~--~~~~g~-------------------~~~~Y~gP~Pp~g~g~HRY~f~lyf 59 (113)
|+|||||++ ++|+||+++|||++ .+..|. ..++|.|||||+|+|.|||+|+||
T Consensus 52 ~~DPDAP~~-----~~~~HW~v~nIp~~~~~l~~g~~~~~~~~l~~g~~~g~nd~g~~~Y~GP~PP~g~g~HRY~F~ly- 125 (166)
T 1fux_A 52 VYDPDAPTG-----SGWWHWTVVNIPATVTYLPVDAGRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVW- 125 (166)
T ss_dssp EEETTSTTT-----TCEEEEEEEEEETTCCEECTTTTCTTCTTSCTTCEECCCTTSSSSCCCBCCCTTCCCEECEEEEE-
T ss_pred EECCCCCCC-----CcEEEeEEeCcCCCcccccCCccccccccCCCCcEEeecCCCCccccCCCCcCCCCcEEEEEEEe-
Confidence 799999975 37999999999986 233221 378999999999999999999996
Q ss_pred eecC-CC
Q psy6923 60 KQLG-NS 65 (113)
Q Consensus 60 ~Q~~-~~ 65 (113)
+|+. .+
T Consensus 126 ald~~~l 132 (166)
T 1fux_A 126 ALKTEKI 132 (166)
T ss_dssp EESCSCC
T ss_pred EeccccC
Confidence 9987 44
No 8
>3n08_A Putative phosphatidylethanolamine-binding protein; eukarytic homolog RAF kinase inhibitor protein (RKIP). csgid structural genomics; 1.25A {Chlamydia trachomatis} SCOP: b.17.1.0
Probab=99.74 E-value=2.7e-18 Score=122.94 Aligned_cols=61 Identities=18% Similarity=0.224 Sum_probs=50.6
Q ss_pred CcCCCCCCCCCCCCCCeEEEEEeCcCCC--CCCCCc-----------eeecccCCCCCCCCCCCcEEEEEeeeecCCC
Q psy6923 1 MVDPDAPSRKDQKLSPILHYLVGNIPGH--DVNKGH-----------IIADYRGAMPPKGSGRTSSQWITEVKQLGNS 65 (113)
Q Consensus 1 mvDPDaP~~~~~~~~~~lHwlv~nI~~~--~~~~g~-----------~~~~Y~gP~Pp~g~g~HRY~f~lyf~Q~~~~ 65 (113)
|+|||||++.++ .++|+||+++|||++ .+.+|. ....|.|||||+|+ |||+|+|| +|+..+
T Consensus 48 ~~DpDAPs~~~~-~~~~~HWvv~nIp~~~~~l~~g~~~g~~~g~n~~g~~~Y~GP~PP~g~--HrY~F~vy-Ald~~L 121 (153)
T 3n08_A 48 VEDPDVPPSVRE-DGLWIHWIVYNLSPVVSNLAEGAQIFAVQGLNTAGEIGYCPPCPPDAK--HRYYFYAY-ALDVVL 121 (153)
T ss_dssp EEETTSCTTTCT-TSCEEEEEEEEECTTCCEECTTCCCSSEECBCTTSSBSCCCCCCSSSC--EEEEEEEE-EESSCC
T ss_pred EECCCCCCccCC-CCcEEEEEEEcCCCCcccccCCCCCCceEeecCCCCccccCCcCcCCC--EEEEEEEE-EECCcC
Confidence 789999998765 479999999999986 343332 36789999999987 99999996 998765
No 9
>1fjj_A Hypothetical 17.1 kDa protein in MODC-BIOA intergenic region; PEPB family, lipid binding protein; HET: MSE EPE; 1.66A {Escherichia coli} SCOP: b.17.1.2 PDB: 1vi3_A*
Probab=99.73 E-value=1.7e-18 Score=124.51 Aligned_cols=58 Identities=31% Similarity=0.453 Sum_probs=47.8
Q ss_pred CcCCCCCCCCCCCCCCeEEEEEeCcCCC--CCCCCc------------------eeecccCCCCCCCCCCCcEEEEEeee
Q psy6923 1 MVDPDAPSRKDQKLSPILHYLVGNIPGH--DVNKGH------------------IIADYRGAMPPKGSGRTSSQWITEVK 60 (113)
Q Consensus 1 mvDPDaP~~~~~~~~~~lHwlv~nI~~~--~~~~g~------------------~~~~Y~gP~Pp~g~g~HRY~f~lyf~ 60 (113)
|+|||+|++ ++|+||+++|||++ .+..|. ..++|.|||||+|+ .|||+|+|| +
T Consensus 51 ~~DPDAP~~-----~~~~HW~v~nIp~~~~~l~~g~~~~~~~~~~g~~~g~n~~g~~~Y~GP~PP~g~-~HRY~F~ly-a 123 (159)
T 1fjj_A 51 CYDPDAPTG-----SGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGE-THRYIFTVH-A 123 (159)
T ss_dssp EEETTSTTT-----TCEEEEEEEEEETTCCEECTTGGGTSSCCCTTCEECBCTTSSBSCCCBCCSTTC-CEEEEEEEE-E
T ss_pred EECCCCCCC-----CcEEEEEEEccCCCccccCCCcccccccCCCCcEEeecCCCCCcccCCCCcCCC-ceEEEEEEE-E
Confidence 799999976 37999999999986 233321 37899999999999 999999996 9
Q ss_pred ecC-CC
Q psy6923 61 QLG-NS 65 (113)
Q Consensus 61 Q~~-~~ 65 (113)
|+. .+
T Consensus 124 ld~~~l 129 (159)
T 1fjj_A 124 LDIERI 129 (159)
T ss_dssp ESSSCC
T ss_pred ccCccc
Confidence 986 44
No 10
>2evv_A Hypothetical protein HP0218; alpha-beta structure, dimer, structural genomics, PSI, prote structure initiative; HET: MSE; 2.59A {Helicobacter pylori}
Probab=99.58 E-value=3.8e-16 Score=116.58 Aligned_cols=59 Identities=25% Similarity=0.333 Sum_probs=45.6
Q ss_pred CcCCCCCCCCCCCCCCeEEEEEeCcCCCCCCCC--------------------cee-------------ecccCCCCCCC
Q psy6923 1 MVDPDAPSRKDQKLSPILHYLVGNIPGHDVNKG--------------------HII-------------ADYRGAMPPKG 47 (113)
Q Consensus 1 mvDPDaP~~~~~~~~~~lHwlv~nI~~~~~~~g--------------------~~~-------------~~Y~gP~Pp~g 47 (113)
|+|||||++. .++|+||+++||+...+..| ... +.|.|||||.|
T Consensus 78 m~DPDAP~~~---g~~~~HWvv~NI~~~~l~eg~~~~~~g~~qG~N~~~~~~g~~~~~~~~k~~~~~~~~~Y~GP~PP~G 154 (207)
T 2evv_A 78 LIDHDAQKVC---GMPFVHWVVGNIAHNVLEENASMMDKRIVQGVNSLTQGFIRSPLNESEKQRSNLNNSVYIGPMPPNG 154 (207)
T ss_dssp EEETTHHHHH---SSCEEEEEEEEECSSEECTTHHHHCSSSEECCCTTCSCSTTCSSCHHHHHHHHHHTCSCCCCCCSSS
T ss_pred EECCCCCCCC---CCcEEEEEEeCCCCCccccCcccCCCCceecccccccccccccccccccccccccccccCCCCCCCC
Confidence 7899999864 35899999999965543322 111 88999999965
Q ss_pred CCCCcEEEEEeeeecC-CC
Q psy6923 48 SGRTSSQWITEVKQLG-NS 65 (113)
Q Consensus 48 ~g~HRY~f~lyf~Q~~-~~ 65 (113)
.|||+|+|| +|+. .+
T Consensus 155 --~HRYvF~vy-ALd~~~L 170 (207)
T 2evv_A 155 --DHHYLIQVY-ALDIPKL 170 (207)
T ss_dssp --CEEEEEEEE-EESSSCC
T ss_pred --cEEEEEEEE-EecCccC
Confidence 799999996 9987 44
Done!