Query psy6924
Match_columns 89
No_of_seqs 180 out of 1257
Neff 7.6
Searched_HMMs 29240
Date Fri Aug 16 21:56:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6924.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6924hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3eyt_A Uncharacterized protein 99.7 3.7E-17 1.3E-21 103.1 7.3 65 18-84 4-69 (158)
2 3lor_A Thiol-disulfide isomera 99.7 7E-17 2.4E-21 101.8 6.3 66 16-84 5-71 (160)
3 4fo5_A Thioredoxin-like protei 99.7 8.6E-17 2.9E-21 100.4 6.5 65 14-83 7-71 (143)
4 2obi_A PHGPX, GPX-4, phospholi 99.7 8.9E-17 3E-21 104.5 5.9 77 4-84 11-87 (183)
5 2f8a_A Glutathione peroxidase 99.7 1.3E-16 4.3E-21 106.9 5.6 62 19-83 25-86 (208)
6 3kij_A Probable glutathione pe 99.7 1.4E-16 4.9E-21 103.4 5.7 63 18-84 16-78 (180)
7 3eur_A Uncharacterized protein 99.6 2.4E-16 8.4E-21 98.2 6.2 64 17-84 8-74 (142)
8 3dwv_A Glutathione peroxidase- 99.6 1.2E-16 4.2E-21 104.6 4.9 65 16-84 22-86 (187)
9 3raz_A Thioredoxin-related pro 99.6 6.2E-16 2.1E-20 97.2 6.3 52 32-84 13-64 (151)
10 2i3y_A Epididymal secretory gl 99.6 3.8E-16 1.3E-20 105.7 5.6 63 18-84 33-95 (215)
11 2lrt_A Uncharacterized protein 99.6 7.5E-16 2.6E-20 97.6 6.6 66 14-83 9-74 (152)
12 2v1m_A Glutathione peroxidase; 99.6 5.8E-16 2E-20 98.3 5.4 63 18-84 9-71 (169)
13 3ewl_A Uncharacterized conserv 99.6 6.8E-16 2.3E-20 95.7 5.6 62 18-83 5-69 (142)
14 2p5q_A Glutathione peroxidase 99.6 6.1E-16 2.1E-20 98.3 5.4 63 17-83 9-71 (170)
15 2p31_A CL683, glutathione pero 99.6 7.2E-16 2.5E-20 100.3 5.3 64 17-84 26-89 (181)
16 2r37_A Glutathione peroxidase 99.6 7.9E-16 2.7E-20 103.3 5.1 62 19-84 16-77 (207)
17 3cmi_A Peroxiredoxin HYR1; thi 99.6 1.1E-15 3.9E-20 98.2 5.4 62 18-84 10-71 (171)
18 2gs3_A PHGPX, GPX-4, phospholi 99.6 1.5E-15 5E-20 99.1 5.8 64 17-84 26-89 (185)
19 3hcz_A Possible thiol-disulfid 99.6 1.7E-15 6E-20 93.8 5.8 66 14-83 5-70 (148)
20 3lwa_A Secreted thiol-disulfid 99.6 3.1E-15 1.1E-19 96.7 6.6 69 13-83 30-104 (183)
21 2lrn_A Thiol:disulfide interch 99.6 3.7E-15 1.3E-19 93.7 6.6 63 17-83 6-68 (152)
22 2hyx_A Protein DIPZ; thioredox 99.6 5.5E-15 1.9E-19 106.4 7.9 71 13-84 50-122 (352)
23 2vup_A Glutathione peroxidase- 99.6 3E-15 1E-19 98.0 5.7 63 18-84 26-88 (190)
24 3fw2_A Thiol-disulfide oxidore 99.6 6.6E-15 2.2E-19 92.4 6.9 64 16-83 7-75 (150)
25 3or5_A Thiol:disulfide interch 99.6 1E-14 3.6E-19 92.0 6.9 64 16-83 10-73 (165)
26 2b5x_A YKUV protein, TRXY; thi 99.5 8.1E-15 2.8E-19 90.6 6.2 64 17-83 4-67 (148)
27 1i5g_A Tryparedoxin II; electr 99.5 6.6E-15 2.3E-19 91.7 5.8 61 19-83 6-68 (144)
28 3fkf_A Thiol-disulfide oxidore 99.5 6E-15 2.1E-19 91.3 5.5 64 16-83 7-73 (148)
29 1jfu_A Thiol:disulfide interch 99.5 1.2E-14 4.3E-19 94.0 6.9 64 17-84 37-100 (186)
30 3u5r_E Uncharacterized protein 99.5 1.2E-14 4.1E-19 97.4 7.0 67 14-84 32-99 (218)
31 3gl3_A Putative thiol:disulfid 99.5 1.4E-14 4.7E-19 90.5 6.6 64 15-83 4-67 (152)
32 3hdc_A Thioredoxin family prot 99.5 2.8E-14 9.6E-19 90.3 8.0 66 14-83 15-80 (158)
33 2f9s_A Thiol-disulfide oxidore 99.5 1.8E-14 6.2E-19 90.2 6.4 62 19-84 5-66 (151)
34 3drn_A Peroxiredoxin, bacterio 99.5 1E-14 3.5E-19 93.0 5.2 64 17-84 5-70 (161)
35 3s9f_A Tryparedoxin; thioredox 99.5 6.9E-15 2.4E-19 94.6 4.2 49 33-83 39-88 (165)
36 1o73_A Tryparedoxin; electron 99.5 4.4E-14 1.5E-18 87.6 7.5 60 19-83 7-68 (144)
37 2cvb_A Probable thiol-disulfid 99.5 3.6E-14 1.2E-18 92.0 7.3 64 16-84 9-72 (188)
38 1xzo_A BSSCO, hypothetical pro 99.5 1.1E-14 3.7E-19 93.0 4.5 68 13-84 6-76 (174)
39 3gkn_A Bacterioferritin comigr 99.5 1.5E-14 5.2E-19 91.8 5.1 66 15-84 8-76 (163)
40 2ggt_A SCO1 protein homolog, m 99.5 1.9E-14 6.3E-19 90.9 5.4 61 19-83 2-67 (164)
41 1o8x_A Tryparedoxin, TRYX, TXN 99.5 2.7E-14 9.3E-19 89.2 6.1 60 19-83 7-68 (146)
42 4g2e_A Peroxiredoxin; redox pr 99.5 3.4E-15 1.1E-19 95.6 1.7 64 17-84 7-71 (157)
43 3kcm_A Thioredoxin family prot 99.5 4.8E-14 1.7E-18 88.2 7.0 62 18-83 6-67 (154)
44 2lja_A Putative thiol-disulfid 99.5 2.9E-14 1E-18 89.0 6.0 62 18-83 7-69 (152)
45 2c0d_A Thioredoxin peroxidase 99.5 1.5E-14 5.2E-19 97.8 4.5 69 14-84 25-97 (221)
46 3erw_A Sporulation thiol-disul 99.5 4.5E-14 1.5E-18 86.9 5.9 62 17-83 12-73 (145)
47 2pn8_A Peroxiredoxin-4; thiore 99.5 2.1E-14 7E-19 96.2 4.6 69 14-84 19-89 (211)
48 2h30_A Thioredoxin, peptide me 99.5 2.8E-14 9.5E-19 90.1 4.8 51 33-84 28-78 (164)
49 3ztl_A Thioredoxin peroxidase; 99.5 2.1E-14 7.2E-19 96.6 4.4 69 14-84 40-110 (222)
50 2k6v_A Putative cytochrome C o 99.5 3.7E-14 1.3E-18 90.1 5.0 63 17-84 13-79 (172)
51 1xvw_A Hypothetical protein RV 99.5 4.1E-14 1.4E-18 89.4 5.1 65 16-84 11-77 (160)
52 2l5o_A Putative thioredoxin; s 99.5 5.2E-14 1.8E-18 87.9 5.4 63 18-84 6-68 (153)
53 4evm_A Thioredoxin family prot 99.5 9.3E-14 3.2E-18 84.2 6.3 59 20-83 2-60 (138)
54 2rli_A SCO2 protein homolog, m 99.5 5.4E-14 1.8E-18 89.4 5.4 59 21-83 7-70 (171)
55 3ha9_A Uncharacterized thiored 99.5 5E-14 1.7E-18 89.4 5.2 61 17-83 14-74 (165)
56 2ywi_A Hypothetical conserved 99.5 4E-14 1.4E-18 92.1 4.7 65 17-84 21-86 (196)
57 1tp9_A Peroxiredoxin, PRX D (t 99.5 4E-14 1.4E-18 90.8 4.6 69 14-84 4-78 (162)
58 1qmv_A Human thioredoxin perox 99.5 5.9E-14 2E-18 92.2 5.3 67 15-84 6-75 (197)
59 1we0_A Alkyl hydroperoxide red 99.5 6.2E-14 2.1E-18 91.2 4.9 63 18-84 5-72 (187)
60 3ixr_A Bacterioferritin comigr 99.4 4.2E-14 1.4E-18 92.1 3.9 61 20-84 31-92 (179)
61 2wfc_A Peroxiredoxin 5, PRDX5; 99.4 6.5E-14 2.2E-18 90.9 4.7 66 16-84 5-74 (167)
62 1zof_A Alkyl hydroperoxide-red 99.4 6.1E-14 2.1E-18 92.1 4.4 66 17-84 4-74 (198)
63 1q98_A Thiol peroxidase, TPX; 99.4 1.2E-13 4.1E-18 88.5 5.6 65 14-84 17-82 (165)
64 1psq_A Probable thiol peroxida 99.4 2E-13 7E-18 87.2 6.7 66 13-84 15-81 (163)
65 1uul_A Tryparedoxin peroxidase 99.4 1E-13 3.5E-18 91.5 5.4 67 16-84 8-77 (202)
66 1lu4_A Soluble secreted antige 99.4 1.5E-13 5.3E-18 83.8 5.4 59 19-83 3-61 (136)
67 2jsy_A Probable thiol peroxida 99.4 1.3E-13 4.6E-18 87.8 5.3 65 14-84 18-83 (167)
68 3qpm_A Peroxiredoxin; oxidored 99.4 1.1E-13 3.8E-18 94.5 5.2 69 14-84 48-118 (240)
69 2ls5_A Uncharacterized protein 99.2 1E-14 3.5E-19 92.2 0.0 64 16-83 9-74 (159)
70 2a4v_A Peroxiredoxin DOT5; yea 99.4 6.2E-14 2.1E-18 89.0 3.7 65 14-83 7-74 (159)
71 2bmx_A Alkyl hydroperoxidase C 99.4 9.6E-14 3.3E-18 91.1 4.2 50 34-84 36-86 (195)
72 2i81_A 2-Cys peroxiredoxin; st 99.4 1.2E-13 4.3E-18 92.5 4.8 68 15-84 22-93 (213)
73 3kh7_A Thiol:disulfide interch 99.4 2.7E-13 9.2E-18 87.8 6.0 63 14-84 30-94 (176)
74 1zzo_A RV1677; thioredoxin fol 99.4 2.5E-13 8.6E-18 82.6 5.5 59 19-83 4-62 (136)
75 1zye_A Thioredoxin-dependent p 99.4 1.5E-13 5.1E-18 92.4 4.7 69 14-84 27-97 (220)
76 2h01_A 2-Cys peroxiredoxin; th 99.4 1.1E-13 3.9E-18 90.4 4.0 65 18-84 4-72 (192)
77 1n8j_A AHPC, alkyl hydroperoxi 99.4 1.4E-13 4.6E-18 90.2 4.3 64 18-84 5-71 (186)
78 2b7k_A SCO1 protein; metalloch 99.4 1.7E-13 5.8E-18 90.5 4.3 60 20-83 21-84 (200)
79 4gqc_A Thiol peroxidase, perox 99.4 2E-14 7E-19 92.8 -0.4 64 17-84 8-74 (164)
80 3zrd_A Thiol peroxidase; oxido 99.4 3.4E-13 1.1E-17 89.6 5.4 66 13-84 51-117 (200)
81 2yzh_A Probable thiol peroxida 99.4 3.6E-13 1.2E-17 86.5 5.3 65 14-84 21-86 (171)
82 1nm3_A Protein HI0572; hybrid, 99.4 2.4E-13 8.3E-18 91.8 4.6 67 15-84 4-76 (241)
83 3me7_A Putative uncharacterize 99.4 4.3E-13 1.5E-17 86.6 5.3 62 18-83 5-70 (170)
84 3mng_A Peroxiredoxin-5, mitoch 99.4 3.5E-13 1.2E-17 88.2 4.9 67 13-82 14-83 (173)
85 3uma_A Hypothetical peroxiredo 99.4 2.2E-13 7.4E-18 90.0 3.7 69 14-84 26-99 (184)
86 3tjj_A Peroxiredoxin-4; thiore 99.4 2.6E-13 9E-18 93.6 3.9 67 16-84 64-132 (254)
87 3ia1_A THIO-disulfide isomeras 99.4 7.7E-13 2.6E-17 82.8 5.7 61 14-82 5-65 (154)
88 2lus_A Thioredoxion; CR-Trp16, 99.1 4.7E-14 1.6E-18 87.1 0.0 49 33-82 14-66 (143)
89 4hde_A SCO1/SENC family lipopr 99.4 3.8E-13 1.3E-17 87.2 4.3 62 17-82 9-73 (170)
90 2av4_A Thioredoxin-like protei 99.4 9.3E-13 3.2E-17 86.1 5.6 34 43-76 40-73 (160)
91 1xvq_A Thiol peroxidase; thior 99.4 1E-12 3.5E-17 85.0 5.8 64 13-83 17-81 (175)
92 2pwj_A Mitochondrial peroxired 99.4 3.6E-13 1.2E-17 87.4 3.6 65 19-84 12-86 (171)
93 1z6n_A Hypothetical protein PA 99.4 5.3E-13 1.8E-17 87.1 4.1 36 40-75 50-85 (167)
94 3ul3_B Thioredoxin, thioredoxi 99.3 2.5E-12 8.5E-17 79.1 7.0 47 33-81 32-78 (128)
95 3p7x_A Probable thiol peroxida 99.3 6.5E-13 2.2E-17 85.0 4.3 65 13-84 19-84 (166)
96 2b1k_A Thiol:disulfide interch 99.3 1.3E-12 4.4E-17 83.0 5.4 62 16-83 24-86 (168)
97 3zzx_A Thioredoxin; oxidoreduc 99.3 7.8E-13 2.7E-17 80.1 4.1 36 40-75 16-51 (105)
98 3hxs_A Thioredoxin, TRXP; elec 99.3 2.6E-12 8.8E-17 79.7 5.7 47 33-81 41-87 (141)
99 3gix_A Thioredoxin-like protei 99.3 2.7E-12 9.1E-17 81.7 4.9 35 42-76 21-55 (149)
100 1kng_A Thiol:disulfide interch 99.3 4.2E-12 1.5E-16 79.2 5.3 60 17-83 11-78 (156)
101 1qgv_A Spliceosomal protein U5 99.2 1.3E-11 4.3E-16 78.0 6.0 38 43-81 22-59 (142)
102 2djj_A PDI, protein disulfide- 99.2 1.8E-11 6.1E-16 73.8 6.3 43 33-75 14-56 (121)
103 3qfa_C Thioredoxin; protein-pr 99.2 9E-12 3.1E-16 75.6 4.1 34 42-75 29-62 (116)
104 3p2a_A Thioredoxin 2, putative 99.2 2.2E-11 7.6E-16 76.3 6.0 47 33-81 45-91 (148)
105 1xcc_A 1-Cys peroxiredoxin; un 99.2 8.5E-12 2.9E-16 84.2 4.2 66 16-84 5-72 (220)
106 2v2g_A Peroxiredoxin 6; oxidor 99.2 7.4E-12 2.5E-16 85.4 4.0 64 16-84 5-70 (233)
107 1prx_A HORF6; peroxiredoxin, h 99.2 7.5E-12 2.6E-16 84.7 3.9 65 15-84 6-72 (224)
108 2l57_A Uncharacterized protein 99.2 1.7E-11 5.9E-16 74.7 5.0 42 40-82 22-63 (126)
109 2dj0_A Thioredoxin-related tra 99.2 9.9E-12 3.4E-16 77.1 3.9 42 41-82 23-64 (137)
110 4euy_A Uncharacterized protein 99.2 2.1E-11 7.2E-16 72.3 4.9 33 42-74 16-48 (105)
111 3f3q_A Thioredoxin-1; His TAG, 99.2 2E-11 7E-16 73.1 4.8 34 42-75 22-55 (109)
112 2fwh_A Thiol:disulfide interch 99.2 5.2E-12 1.8E-16 78.4 2.1 44 35-81 23-69 (134)
113 2dj3_A Protein disulfide-isome 99.2 6.5E-11 2.2E-15 72.5 6.8 39 43-81 24-63 (133)
114 3f9u_A Putative exported cytoc 99.2 3.6E-12 1.2E-16 81.7 1.1 47 35-83 39-88 (172)
115 3evi_A Phosducin-like protein 99.2 2.4E-11 8.2E-16 75.2 4.8 33 43-75 22-54 (118)
116 3qou_A Protein YBBN; thioredox 99.2 2E-11 6.8E-16 83.7 4.8 41 41-82 23-63 (287)
117 3d6i_A Monothiol glutaredoxin- 99.2 2.1E-11 7.1E-16 72.7 4.1 41 42-82 19-59 (112)
118 2pu9_C TRX-F, thioredoxin F-ty 99.2 3.6E-11 1.2E-15 71.7 5.2 35 41-75 21-55 (111)
119 2ppt_A Thioredoxin-2; thiredox 99.2 3.2E-11 1.1E-15 77.0 4.7 38 43-81 63-100 (155)
120 3die_A Thioredoxin, TRX; elect 99.1 6.5E-11 2.2E-15 69.4 5.4 39 42-81 17-55 (106)
121 3sbc_A Peroxiredoxin TSA1; alp 99.1 4.2E-11 1.4E-15 81.4 5.0 66 17-84 26-93 (216)
122 3h79_A Thioredoxin-like protei 99.1 6.5E-11 2.2E-15 72.4 5.4 32 43-74 32-63 (127)
123 2dj1_A Protein disulfide-isome 99.1 5.8E-11 2E-15 73.3 4.8 48 33-81 24-73 (140)
124 1gh2_A Thioredoxin-like protei 99.1 7.1E-11 2.4E-15 70.0 4.9 33 42-74 19-51 (107)
125 2voc_A Thioredoxin; electron t 99.1 8.6E-11 3E-15 70.4 5.3 38 43-81 16-53 (112)
126 2dbc_A PDCL2, unnamed protein 99.1 4E-11 1.4E-15 74.8 4.0 33 43-75 29-61 (135)
127 2trx_A Thioredoxin; electron t 99.1 1.5E-10 5E-15 68.3 6.1 39 42-81 18-56 (108)
128 3m9j_A Thioredoxin; oxidoreduc 99.1 7.9E-11 2.7E-15 69.1 4.9 35 41-75 17-51 (105)
129 1t00_A Thioredoxin, TRX; redox 99.1 9.1E-11 3.1E-15 69.8 5.2 38 43-81 22-59 (112)
130 1xfl_A Thioredoxin H1; AT3G510 99.1 1.1E-10 3.7E-15 71.7 5.6 38 42-81 36-73 (124)
131 1x5d_A Protein disulfide-isome 99.1 8.3E-11 2.8E-15 71.8 5.1 32 43-74 24-55 (133)
132 3cxg_A Putative thioredoxin; m 99.1 2.9E-11 1E-15 75.1 3.0 34 40-73 36-69 (133)
133 1nsw_A Thioredoxin, TRX; therm 99.1 9.6E-11 3.3E-15 68.8 5.1 39 42-81 15-53 (105)
134 3idv_A Protein disulfide-isome 99.1 5.8E-11 2E-15 78.9 4.6 48 33-81 22-71 (241)
135 3aps_A DNAJ homolog subfamily 99.1 1E-10 3.4E-15 70.7 5.1 38 43-81 20-57 (122)
136 1faa_A Thioredoxin F; electron 99.1 8.6E-11 3E-15 71.3 4.8 35 41-75 34-68 (124)
137 1sen_A Thioredoxin-like protei 99.1 9.3E-12 3.2E-16 80.2 0.4 48 26-74 29-76 (164)
138 2oe3_A Thioredoxin-3; electron 99.1 1.1E-10 3.9E-15 70.6 5.2 33 43-75 29-61 (114)
139 2dml_A Protein disulfide-isome 99.1 9.2E-11 3.2E-15 71.5 4.8 38 43-81 34-71 (130)
140 1ep7_A Thioredoxin CH1, H-type 99.1 1.1E-10 3.7E-15 69.3 5.0 38 44-82 24-61 (112)
141 2l5l_A Thioredoxin; structural 99.1 1.7E-10 5.9E-15 71.4 6.0 38 43-81 37-74 (136)
142 2o8v_B Thioredoxin 1; disulfid 99.1 1.8E-10 6.3E-15 71.1 6.0 39 42-81 38-76 (128)
143 2lst_A Thioredoxin; structural 98.7 9.3E-12 3.2E-16 76.2 0.0 47 28-75 4-53 (130)
144 1dby_A Chloroplast thioredoxin 99.1 1.5E-10 5E-15 68.3 5.2 38 43-81 18-55 (107)
145 2vlu_A Thioredoxin, thioredoxi 99.1 1.2E-10 4.2E-15 70.3 4.9 33 43-75 33-65 (122)
146 3fk8_A Disulphide isomerase; A 99.1 5.3E-11 1.8E-15 73.1 3.2 41 41-82 26-68 (133)
147 3dxb_A Thioredoxin N-terminall 99.1 1.3E-10 4.3E-15 77.8 5.2 38 43-81 29-66 (222)
148 1zma_A Bacterocin transport ac 99.1 1.3E-10 4.3E-15 70.2 4.7 33 43-75 28-60 (118)
149 1x5e_A Thioredoxin domain cont 99.1 1.3E-10 4.3E-15 70.8 4.7 40 42-82 21-60 (126)
150 2f51_A Thioredoxin; electron t 99.1 1.4E-10 4.9E-15 70.4 5.0 37 43-81 22-58 (118)
151 3gnj_A Thioredoxin domain prot 99.1 1.6E-10 5.6E-15 68.3 5.0 39 42-81 20-58 (111)
152 3q6o_A Sulfhydryl oxidase 1; p 99.1 1.9E-10 6.4E-15 77.6 5.8 39 43-81 29-69 (244)
153 3tco_A Thioredoxin (TRXA-1); d 99.1 2.4E-10 8.1E-15 67.2 5.4 35 42-76 19-53 (109)
154 2i4a_A Thioredoxin; acidophIle 99.1 3.1E-10 1.1E-14 66.6 5.8 39 42-81 18-56 (107)
155 1w4v_A Thioredoxin, mitochondr 99.1 2.1E-10 7.3E-15 69.5 5.2 38 43-81 30-67 (119)
156 1xwb_A Thioredoxin; dimerizati 99.1 3.6E-10 1.2E-14 66.2 5.8 39 42-81 18-56 (106)
157 3hz4_A Thioredoxin; NYSGXRC, P 99.1 2.2E-10 7.5E-15 71.4 5.1 38 43-81 23-60 (140)
158 1thx_A Thioredoxin, thioredoxi 99.0 2.4E-10 8.3E-15 67.8 5.0 39 42-81 23-61 (115)
159 3uvt_A Thioredoxin domain-cont 99.0 2E-10 6.9E-15 67.8 4.6 34 43-76 20-53 (111)
160 2xc2_A Thioredoxinn; oxidoredu 99.0 1.6E-10 5.6E-15 69.5 4.2 33 41-73 30-62 (117)
161 2ju5_A Thioredoxin disulfide i 99.0 2.1E-11 7.3E-16 77.5 0.0 48 33-82 37-88 (154)
162 1ti3_A Thioredoxin H, PTTRXH1; 99.0 3.8E-10 1.3E-14 66.9 5.5 33 42-74 24-56 (113)
163 3d22_A TRXH4, thioredoxin H-ty 99.0 2.5E-10 8.5E-15 70.5 4.7 34 42-75 44-77 (139)
164 2vim_A Thioredoxin, TRX; thior 99.0 3.4E-10 1.2E-14 66.1 5.1 34 41-74 16-49 (104)
165 1fb6_A Thioredoxin M; electron 99.0 3.7E-10 1.3E-14 66.1 5.1 38 43-81 17-54 (105)
166 1a0r_P Phosducin, MEKA, PP33; 99.0 2.5E-10 8.7E-15 78.6 5.1 33 43-75 132-164 (245)
167 1wou_A Thioredoxin -related pr 99.0 3E-10 1E-14 69.4 4.8 39 42-81 22-67 (123)
168 3kp8_A Vkorc1/thioredoxin doma 99.0 2.3E-12 7.8E-17 78.2 -4.8 39 35-74 4-42 (106)
169 2wz9_A Glutaredoxin-3; protein 99.0 3.4E-10 1.2E-14 71.6 4.9 33 42-74 30-62 (153)
170 2e0q_A Thioredoxin; electron t 99.0 4.9E-10 1.7E-14 65.0 5.2 34 42-75 14-47 (104)
171 2yzu_A Thioredoxin; redox prot 99.0 6.6E-10 2.2E-14 65.1 5.6 38 43-81 17-54 (109)
172 1syr_A Thioredoxin; SGPP, stru 99.0 5.3E-10 1.8E-14 66.8 5.2 33 43-75 25-57 (112)
173 1r26_A Thioredoxin; redox-acti 99.0 3.3E-10 1.1E-14 69.8 4.4 34 42-75 35-68 (125)
174 2j23_A Thioredoxin; immune pro 99.0 1.1E-10 3.8E-15 71.0 2.1 41 42-82 31-71 (121)
175 2qsi_A Putative hydrogenase ex 99.0 4.5E-10 1.5E-14 71.6 4.9 38 44-82 33-72 (137)
176 2vm1_A Thioredoxin, thioredoxi 99.0 4.9E-10 1.7E-14 66.9 4.8 32 43-74 27-58 (118)
177 2l6c_A Thioredoxin; oxidoreduc 99.0 3.6E-10 1.2E-14 67.7 4.1 35 41-75 16-50 (110)
178 2i1u_A Thioredoxin, TRX, MPT46 99.0 6.7E-10 2.3E-14 66.7 5.2 38 43-81 29-66 (121)
179 3emx_A Thioredoxin; structural 99.0 1.8E-10 6.1E-15 71.5 2.7 32 42-74 30-61 (135)
180 3f8u_A Protein disulfide-isome 99.0 5.5E-10 1.9E-14 81.5 5.6 39 43-81 369-408 (481)
181 3apq_A DNAJ homolog subfamily 99.0 7.6E-10 2.6E-14 73.2 5.1 39 42-81 112-150 (210)
182 1mek_A Protein disulfide isome 99.0 4.5E-10 1.5E-14 66.9 3.6 35 42-76 22-56 (120)
183 3ph9_A Anterior gradient prote 99.0 1.1E-10 3.8E-15 75.1 0.9 58 25-83 25-85 (151)
184 3ed3_A Protein disulfide-isome 98.9 8.3E-10 2.8E-14 77.3 5.1 34 43-76 34-67 (298)
185 3a2v_A Probable peroxiredoxin; 98.9 3.1E-10 1.1E-14 78.3 2.8 65 16-84 7-74 (249)
186 3tue_A Tryparedoxin peroxidase 98.9 4.6E-10 1.6E-14 76.4 3.5 67 17-84 29-97 (219)
187 1fo5_A Thioredoxin; disulfide 98.9 1.1E-09 3.9E-14 61.9 4.6 31 45-75 3-33 (85)
188 3keb_A Probable thiol peroxida 98.9 7.9E-10 2.7E-14 75.4 4.3 63 13-84 21-89 (224)
189 3uem_A Protein disulfide-isome 98.9 1.6E-09 5.5E-14 76.3 5.9 35 43-77 266-300 (361)
190 2qgv_A Hydrogenase-1 operon pr 98.9 5.9E-10 2E-14 71.3 3.3 40 43-82 33-74 (140)
191 3h93_A Thiol:disulfide interch 98.9 2.5E-09 8.5E-14 69.6 6.3 64 21-88 4-67 (192)
192 3hd5_A Thiol:disulfide interch 98.9 3.4E-09 1.1E-13 69.1 6.5 52 33-88 16-67 (195)
193 3t58_A Sulfhydryl oxidase 1; o 98.9 2.6E-09 8.8E-14 80.1 5.7 33 43-75 29-61 (519)
194 1v98_A Thioredoxin; oxidoreduc 98.9 4.8E-09 1.6E-13 65.0 5.8 35 46-81 52-86 (140)
195 2trc_P Phosducin, MEKA, PP33; 98.9 1.5E-09 5.1E-14 73.2 3.7 33 43-75 119-151 (217)
196 1nho_A Probable thioredoxin; b 98.9 1.1E-09 3.6E-14 62.0 2.4 30 46-75 3-32 (85)
197 2b5e_A Protein disulfide-isome 98.8 2.5E-09 8.5E-14 78.6 4.8 39 43-81 375-415 (504)
198 2kuc_A Putative disulphide-iso 98.8 5.5E-10 1.9E-14 68.0 1.1 45 35-81 19-66 (130)
199 1a8l_A Protein disulfide oxido 98.8 3.8E-09 1.3E-13 69.8 5.0 33 43-75 133-165 (226)
200 1wmj_A Thioredoxin H-type; str 98.8 6.5E-10 2.2E-14 67.5 0.9 34 42-75 34-67 (130)
201 2b5e_A Protein disulfide-isome 98.8 5E-09 1.7E-13 77.0 5.8 40 43-82 30-69 (504)
202 3ira_A Conserved protein; meth 98.8 1.6E-09 5.6E-14 71.1 2.8 55 27-83 22-80 (173)
203 1oaz_A Thioredoxin 1; immune s 98.8 1.1E-09 3.7E-14 67.2 1.8 39 42-81 19-71 (123)
204 1ilo_A Conserved hypothetical 98.8 5.6E-09 1.9E-13 58.2 4.6 34 47-81 2-35 (77)
205 2r2j_A Thioredoxin domain-cont 98.8 6.4E-09 2.2E-13 74.4 5.7 33 43-75 21-53 (382)
206 3hz8_A Thiol:disulfide interch 98.8 1.1E-08 3.8E-13 67.2 6.4 46 41-88 21-66 (193)
207 2hls_A Protein disulfide oxido 98.8 6.3E-09 2.2E-13 70.7 5.3 34 41-74 135-168 (243)
208 3qcp_A QSOX from trypanosoma b 98.8 7.5E-09 2.6E-13 77.1 6.1 34 43-76 41-74 (470)
209 3gyk_A 27KDA outer membrane pr 98.8 7.8E-09 2.7E-13 66.2 5.3 45 30-75 9-53 (175)
210 3idv_A Protein disulfide-isome 98.8 6.6E-09 2.3E-13 68.9 4.7 34 43-76 146-179 (241)
211 1sji_A Calsequestrin 2, calseq 98.8 9.5E-09 3.3E-13 72.6 5.3 39 43-82 27-72 (350)
212 3iv4_A Putative oxidoreductase 98.8 1E-08 3.5E-13 63.4 4.8 39 43-82 23-61 (112)
213 2yj7_A LPBCA thioredoxin; oxid 98.2 9.7E-10 3.3E-14 63.9 0.0 34 42-75 17-50 (106)
214 3ga4_A Dolichyl-diphosphooligo 98.7 1.6E-08 5.3E-13 66.9 5.4 32 43-74 36-74 (178)
215 3f8u_A Protein disulfide-isome 98.7 1.1E-08 3.9E-13 74.5 5.1 34 43-76 20-53 (481)
216 1un2_A DSBA, thiol-disulfide i 98.7 3.8E-09 1.3E-13 70.3 1.3 45 42-88 111-158 (197)
217 4f82_A Thioredoxin reductase; 98.7 1.2E-08 4.2E-13 67.3 3.5 50 34-84 37-90 (176)
218 4eo3_A Bacterioferritin comigr 98.7 3.8E-08 1.3E-12 69.8 6.1 58 19-84 3-61 (322)
219 2ywm_A Glutaredoxin-like prote 98.6 4.3E-08 1.5E-12 65.0 5.5 32 43-74 135-166 (229)
220 3apo_A DNAJ homolog subfamily 98.6 3.9E-08 1.3E-12 75.5 5.9 41 41-82 452-492 (780)
221 2znm_A Thiol:disulfide interch 98.6 7.7E-08 2.6E-12 62.4 6.1 59 26-88 6-64 (195)
222 3apo_A DNAJ homolog subfamily 98.6 4.3E-08 1.5E-12 75.3 5.1 38 43-81 674-711 (780)
223 2e7p_A Glutaredoxin; thioredox 98.5 2.2E-08 7.7E-13 60.0 1.4 30 42-72 17-46 (116)
224 1eej_A Thiol:disulfide interch 98.5 8.5E-08 2.9E-12 63.9 4.3 35 36-71 79-113 (216)
225 3feu_A Putative lipoprotein; a 98.5 1.4E-07 4.9E-12 61.6 4.3 41 44-88 22-62 (185)
226 2rem_A Disulfide oxidoreductas 98.4 7.5E-07 2.6E-11 57.5 7.1 58 26-87 8-66 (193)
227 3us3_A Calsequestrin-1; calciu 98.4 3.6E-07 1.2E-11 65.2 5.3 40 43-82 29-74 (367)
228 1z6m_A Conserved hypothetical 98.4 9.4E-07 3.2E-11 56.4 6.5 40 33-73 17-56 (175)
229 2djk_A PDI, protein disulfide- 98.4 3.1E-07 1.1E-11 56.8 3.8 33 43-76 22-54 (133)
230 2es7_A Q8ZP25_salty, putative 98.3 2.3E-07 8E-12 58.6 2.9 30 44-73 34-65 (142)
231 1a8l_A Protein disulfide oxido 98.3 5.5E-07 1.9E-11 59.3 4.1 32 41-72 19-51 (226)
232 3dml_A Putative uncharacterize 98.3 2.7E-07 9.3E-12 57.1 2.3 27 41-67 15-41 (116)
233 1ego_A Glutaredoxin; electron 98.3 7.1E-07 2.4E-11 50.5 3.9 28 48-75 3-30 (85)
234 2xhf_A Peroxiredoxin 5; oxidor 98.3 5.9E-07 2E-11 58.8 3.8 69 11-84 11-84 (171)
235 2fgx_A Putative thioredoxin; N 98.2 7.4E-07 2.5E-11 54.4 3.5 30 45-74 29-58 (107)
236 1wjk_A C330018D20RIK protein; 98.2 3.6E-07 1.2E-11 54.3 1.4 38 33-70 4-41 (100)
237 2k8s_A Thioredoxin; dimer, str 98.2 5.6E-07 1.9E-11 51.0 1.6 27 48-74 4-30 (80)
238 3l9v_A Putative thiol-disulfid 98.2 7.7E-07 2.6E-11 58.1 2.4 35 42-76 12-49 (189)
239 1t3b_A Thiol:disulfide interch 98.1 2E-06 6.8E-11 57.2 3.8 30 42-71 84-113 (211)
240 1ttz_A Conserved hypothetical 98.1 5.6E-07 1.9E-11 52.7 0.8 25 48-72 3-27 (87)
241 1hyu_A AHPF, alkyl hydroperoxi 98.1 2.3E-06 8E-11 63.5 4.0 33 42-74 115-147 (521)
242 3kp9_A Vkorc1/thioredoxin doma 98.0 8.7E-07 3E-11 62.4 0.5 29 45-73 198-226 (291)
243 1xiy_A Peroxiredoxin, pfaop; a 98.0 6.9E-06 2.4E-10 54.0 4.3 50 34-84 33-87 (182)
244 4dvc_A Thiol:disulfide interch 98.0 1.6E-05 5.6E-10 50.4 5.9 38 42-79 19-56 (184)
245 1v58_A Thiol:disulfide interch 98.0 1.5E-05 5.2E-10 53.9 6.0 37 35-72 89-125 (241)
246 2dlx_A UBX domain-containing p 97.9 1.1E-05 3.7E-10 51.8 4.1 23 41-63 39-61 (153)
247 3l9s_A Thiol:disulfide interch 97.9 8.1E-06 2.8E-10 53.6 3.5 36 41-76 18-56 (191)
248 2c0g_A ERP29 homolog, windbeut 97.8 2.5E-05 8.4E-10 53.7 5.1 29 43-75 32-62 (248)
249 2ywm_A Glutaredoxin-like prote 97.8 1.9E-05 6.4E-10 52.1 3.7 33 42-74 19-55 (229)
250 1kte_A Thioltransferase; redox 97.7 1.2E-05 4.2E-10 47.1 1.4 27 48-74 14-40 (105)
251 2qc7_A ERP31, ERP28, endoplasm 97.6 6.1E-05 2.1E-09 51.4 4.7 30 43-76 21-52 (240)
252 2hls_A Protein disulfide oxido 97.6 7.8E-05 2.7E-09 50.4 4.7 32 43-74 24-57 (243)
253 3uem_A Protein disulfide-isome 97.6 7.2E-05 2.5E-09 52.4 4.5 33 44-76 135-167 (361)
254 1h75_A Glutaredoxin-like prote 97.6 4.4E-05 1.5E-09 42.6 2.6 22 48-69 3-24 (81)
255 3gha_A Disulfide bond formatio 97.5 0.00029 1E-08 46.4 6.6 38 40-77 25-63 (202)
256 3c7m_A Thiol:disulfide interch 97.4 0.00017 5.8E-09 46.1 4.5 34 43-76 16-50 (195)
257 3gn3_A Putative protein-disulf 97.3 0.00035 1.2E-08 45.5 5.2 51 34-87 7-58 (182)
258 3gv1_A Disulfide interchange p 97.3 0.00013 4.6E-09 46.2 2.7 34 35-69 6-39 (147)
259 1r7h_A NRDH-redoxin; thioredox 97.3 0.00014 4.9E-09 39.6 2.2 22 48-69 3-24 (75)
260 3nzn_A Glutaredoxin; structura 97.1 0.0002 7E-09 42.1 2.1 23 48-70 24-46 (103)
261 3f4s_A Alpha-DSBA1, putative u 97.1 0.0012 4E-08 44.4 6.1 37 40-76 35-72 (226)
262 2hze_A Glutaredoxin-1; thiored 97.1 0.00017 5.9E-09 43.2 1.5 24 47-70 20-43 (114)
263 3rhb_A ATGRXC5, glutaredoxin-C 97.1 0.00027 9.2E-09 42.1 2.2 22 48-69 21-42 (113)
264 2cq9_A GLRX2 protein, glutared 97.1 0.0003 1E-08 43.3 2.4 24 46-70 28-51 (130)
265 3bci_A Disulfide bond protein 97.0 0.0011 3.8E-08 42.3 5.0 38 40-77 7-45 (186)
266 2ht9_A Glutaredoxin-2; thiored 97.0 0.00039 1.3E-08 43.9 2.7 24 46-70 50-73 (146)
267 3gmf_A Protein-disulfide isome 96.9 0.0022 7.5E-08 42.4 5.6 35 40-74 11-46 (205)
268 2klx_A Glutaredoxin; thioredox 96.9 0.00049 1.7E-08 39.1 2.1 22 48-69 8-29 (89)
269 3c1r_A Glutaredoxin-1; oxidize 96.7 0.00048 1.7E-08 41.7 1.5 22 48-69 27-49 (118)
270 1fov_A Glutaredoxin 3, GRX3; a 96.7 0.0011 3.8E-08 36.6 2.7 22 48-69 3-24 (82)
271 3qmx_A Glutaredoxin A, glutare 96.7 0.0011 3.8E-08 39.0 2.7 24 47-70 17-40 (99)
272 2yan_A Glutaredoxin-3; oxidore 96.7 0.001 3.5E-08 39.2 2.4 24 45-69 17-45 (105)
273 2khp_A Glutaredoxin; thioredox 96.5 0.0016 5.3E-08 37.0 2.6 22 48-69 8-29 (92)
274 3ic4_A Glutaredoxin (GRX-1); s 96.5 0.0013 4.4E-08 37.4 2.1 23 48-70 14-36 (92)
275 3msz_A Glutaredoxin 1; alpha-b 96.4 0.0018 6.2E-08 36.2 2.2 23 47-69 5-27 (89)
276 3h8q_A Thioredoxin reductase 3 96.1 0.0028 9.6E-08 37.9 2.2 20 50-69 21-40 (114)
277 3tdg_A DSBG, putative uncharac 96.1 0.004 1.4E-07 43.5 3.1 31 42-72 145-175 (273)
278 3ctg_A Glutaredoxin-2; reduced 95.7 0.0037 1.3E-07 38.5 1.5 22 48-69 39-61 (129)
279 2lqo_A Putative glutaredoxin R 95.4 0.0075 2.6E-07 35.3 2.1 21 48-68 6-26 (92)
280 1wik_A Thioredoxin-like protei 95.2 0.0084 2.9E-07 35.4 1.9 26 44-69 14-43 (109)
281 3l4n_A Monothiol glutaredoxin- 94.3 0.028 9.5E-07 34.6 2.6 22 48-69 16-37 (127)
282 1aba_A Glutaredoxin; electron 92.3 0.1 3.5E-06 29.2 2.6 22 48-69 2-27 (87)
283 3kzq_A Putative uncharacterize 92.1 0.32 1.1E-05 31.3 5.2 31 46-76 3-33 (208)
284 2wci_A Glutaredoxin-4; redox-a 91.8 0.052 1.8E-06 33.7 1.0 25 45-69 35-63 (135)
285 2l4c_A Endoplasmic reticulum r 91.8 0.27 9.4E-06 29.8 4.3 30 43-75 38-67 (124)
286 2axo_A Hypothetical protein AT 91.5 0.18 6.2E-06 35.0 3.6 29 45-73 43-71 (270)
287 4f9z_D Endoplasmic reticulum r 91.3 0.41 1.4E-05 31.3 5.1 32 45-76 132-163 (227)
288 3zyw_A Glutaredoxin-3; metal b 90.6 0.15 5.2E-06 30.3 2.3 26 43-69 14-44 (111)
289 2in3_A Hypothetical protein; D 90.3 0.59 2E-05 29.9 5.1 29 45-73 7-35 (216)
290 1nm3_A Protein HI0572; hybrid, 88.2 0.32 1.1E-05 31.9 2.7 24 46-69 170-193 (241)
291 1t1v_A SH3BGRL3, SH3 domain-bi 87.7 0.3 1E-05 27.6 2.0 21 48-68 4-30 (93)
292 3gx8_A Monothiol glutaredoxin- 87.1 0.39 1.3E-05 28.9 2.4 27 43-69 14-44 (121)
293 2wem_A Glutaredoxin-related pr 86.6 0.34 1.2E-05 29.2 1.9 27 43-69 18-48 (118)
294 3ipz_A Monothiol glutaredoxin- 86.6 0.42 1.4E-05 28.0 2.3 27 43-69 16-46 (109)
295 2ct6_A SH3 domain-binding glut 86.0 0.41 1.4E-05 28.2 2.0 21 48-68 10-36 (111)
296 1rw1_A Conserved hypothetical 85.3 0.59 2E-05 27.7 2.5 21 48-68 2-22 (114)
297 1z3e_A Regulatory protein SPX; 84.4 0.69 2.4E-05 28.1 2.6 21 48-68 3-23 (132)
298 2ec4_A FAS-associated factor 1 84.2 0.75 2.6E-05 29.7 2.8 23 41-63 52-74 (178)
299 2jvx_A NF-kappa-B essential mo 84.0 0.19 6.6E-06 23.3 -0.1 21 55-75 5-25 (28)
300 2kok_A Arsenate reductase; bru 82.3 0.93 3.2E-05 27.0 2.5 22 48-69 7-28 (120)
301 3l78_A Regulatory protein SPX; 79.8 1.3 4.4E-05 26.5 2.5 21 48-68 2-22 (120)
302 2g2q_A Glutaredoxin-2; thiored 79.7 0.32 1.1E-05 30.0 -0.3 34 45-78 2-35 (124)
303 2imf_A HCCA isomerase, 2-hydro 79.3 2.1 7.2E-05 27.2 3.6 28 47-74 2-29 (203)
304 1sji_A Calsequestrin 2, calseq 79.0 3.5 0.00012 28.4 4.9 31 45-75 246-276 (350)
305 2x8g_A Thioredoxin glutathione 76.3 1.6 5.3E-05 32.5 2.6 22 48-69 20-41 (598)
306 3fz4_A Putative arsenate reduc 75.4 2 6.9E-05 25.7 2.5 21 48-68 5-25 (120)
307 3us3_A Calsequestrin-1; calciu 74.0 5.4 0.00018 27.8 4.8 32 45-76 248-279 (367)
308 3gkx_A Putative ARSC family re 72.1 2.1 7.2E-05 25.7 2.0 21 48-68 6-26 (120)
309 1r4w_A Glutathione S-transfera 71.9 4 0.00014 26.4 3.5 28 46-73 6-33 (226)
310 1s3c_A Arsenate reductase; ARS 67.9 2.6 8.8E-05 26.0 1.8 20 49-68 5-24 (141)
311 4f9z_D Endoplasmic reticulum r 67.4 3.7 0.00013 26.5 2.6 29 43-74 26-54 (227)
312 2jad_A Yellow fluorescent prot 66.3 2 7E-05 30.9 1.2 17 48-64 263-279 (362)
313 3mjh_B Early endosome antigen 65.8 1.9 6.3E-05 20.7 0.6 21 55-75 7-27 (34)
314 1u6t_A SH3 domain-binding glut 65.7 3 0.0001 25.4 1.7 14 47-60 1-14 (121)
315 3rdw_A Putative arsenate reduc 64.4 2.6 8.9E-05 25.3 1.2 21 48-68 7-27 (121)
316 3gl5_A Putative DSBA oxidoredu 63.3 15 0.00051 24.1 5.0 33 44-76 1-33 (239)
317 3f0i_A Arsenate reductase; str 63.0 3.7 0.00013 24.5 1.8 21 48-68 6-26 (119)
318 3vhs_A ATPase wrnip1; zinc fin 50.9 2.6 9E-05 19.0 -0.3 11 55-65 8-18 (29)
319 2wul_A Glutaredoxin related pr 46.7 13 0.00045 22.2 2.3 16 54-69 33-48 (118)
320 3ghf_A Septum site-determining 43.9 33 0.0011 20.5 3.8 38 42-85 45-82 (120)
321 2h8l_A Protein disulfide-isome 37.3 32 0.0011 22.3 3.3 31 43-76 23-53 (252)
322 1th5_A NIFU1; iron-sulfur clus 35.5 36 0.0012 18.7 2.8 41 33-75 24-66 (74)
323 2ijr_A Hypothetical protein AP 31.2 17 0.00058 25.5 1.1 35 33-68 209-243 (300)
324 3ec3_A Protein disulfide-isome 30.4 43 0.0015 21.7 3.0 30 44-76 25-54 (250)
325 2kii_A Putative uncharacterize 28.6 1.1E+02 0.0038 19.1 5.3 38 41-80 122-159 (181)
326 1xhj_A Nitrogen fixation prote 27.3 90 0.0031 17.7 4.0 33 33-67 27-59 (88)
327 2ei9_A Non-LTR retrotransposon 25.7 1.4E+02 0.0047 19.2 4.8 41 44-84 88-128 (240)
328 3fz5_A Possible 2-hydroxychrom 25.1 70 0.0024 20.0 3.2 27 48-74 7-33 (202)
329 2fz5_A Flavodoxin; alpha/beta 22.5 77 0.0026 17.9 2.9 9 42-50 78-86 (137)
330 3rpp_A Glutathione S-transfera 21.7 64 0.0022 20.9 2.6 29 45-73 5-33 (234)
331 4hsp_A Hypothetical protein; P 21.3 40 0.0014 21.3 1.4 15 2-16 81-95 (150)
332 1ag9_A Flavodoxin; electron tr 21.1 1.5E+02 0.005 17.9 4.4 44 41-84 76-119 (175)
No 1
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.70 E-value=3.7e-17 Score=103.09 Aligned_cols=65 Identities=18% Similarity=0.541 Sum_probs=56.5
Q ss_pred ccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhh-ccHHHHHHHHhCcCCeEEEEEE
Q psy6924 18 FHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHI-LPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 18 ~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~-~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
-.+|+|. ..+|++.|+++++ ++++||++||+||++||++|+.+ +|.|++++++|+++++.++++.
T Consensus 4 ~~aP~f~-l~~~~~~g~~~~l-~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~ 69 (158)
T 3eyt_A 4 MKAPELQ-IQQWFNSATDLTL-ADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLH 69 (158)
T ss_dssp EECCCCC-EEEEESCSSCCCT-GGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEE
T ss_pred CcCCCce-ehhhhcCCCccCH-HHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEE
Confidence 4688887 3455566899999 89999999999999999999996 9999999999998888888664
No 2
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.68 E-value=7e-17 Score=101.80 Aligned_cols=66 Identities=24% Similarity=0.460 Sum_probs=56.8
Q ss_pred ccccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhh-ccHHHHHHHHhCcCCeEEEEEE
Q psy6924 16 AIFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHI-LPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 16 ~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~-~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
.+.++|+|. ..+|++ |+++++ ++++||+|||+||++||++|+.+ +|.+++++++|+++++.++++.
T Consensus 5 ~g~~~p~~~-~~~~~~-g~~~~l-~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~ 71 (160)
T 3lor_A 5 DNAPLLELD-VQEWVN-HEGLSN-EDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLH 71 (160)
T ss_dssp TTCCBCCCC-EEEESS-SCCCCH-HHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEE
T ss_pred CCCcCCCcc-cccccC-CCccCH-HHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEe
Confidence 345678887 345666 899999 89999999999999999999995 9999999999999888888764
No 3
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.67 E-value=8.6e-17 Score=100.39 Aligned_cols=65 Identities=5% Similarity=-0.122 Sum_probs=53.6
Q ss_pred ccccccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEE
Q psy6924 14 LVAIFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKT 83 (89)
Q Consensus 14 ~~~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~ 83 (89)
+..+-.+|+|.. . .+ |+++++ ++++||+|||+||++||++|+.++|.+++++++|+++++.++++
T Consensus 7 l~~G~~~P~f~l-~--~~-g~~~~l-~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~v 71 (143)
T 4fo5_A 7 VNPGDLAPRIEF-L--GN-DAKASF-HNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSI 71 (143)
T ss_dssp SSTTSBCCCCCC---------CCCS-CCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEE
T ss_pred cCCcccCCceEE-c--CC-CCEEEH-HHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEE
Confidence 334557899985 2 34 889999 89999999999999999999999999999999999888888865
No 4
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.66 E-value=8.9e-17 Score=104.51 Aligned_cols=77 Identities=9% Similarity=0.035 Sum_probs=59.6
Q ss_pred cccCCCCcccccccccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEE
Q psy6924 4 TGHCSFVPVPLVAIFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKT 83 (89)
Q Consensus 4 ~~~~~~~~~p~~~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~ 83 (89)
++.|+....++..+-.+|+|.... ++ |+++++ ++++||+|||+||++||++|+.++|.|++++++|+++++.++++
T Consensus 11 ~~~~~~~~~~~~~g~~~p~f~l~~--~~-G~~~~l-~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~v 86 (183)
T 2obi_A 11 GSACCASRDDWRCARSMHEFSAKD--ID-GHMVNL-DKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAF 86 (183)
T ss_dssp --------CCGGGCCSGGGCEEEB--TT-SCEEEG-GGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred chhhhhcccCCcccCcccceEEEc--CC-CCEeeH-HHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 466777766677777888887433 34 889999 89999999999999999999999999999999999988888876
Q ss_pred E
Q psy6924 84 F 84 (89)
Q Consensus 84 ~ 84 (89)
.
T Consensus 87 s 87 (183)
T 2obi_A 87 P 87 (183)
T ss_dssp E
T ss_pred E
Confidence 3
No 5
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.65 E-value=1.3e-16 Score=106.91 Aligned_cols=62 Identities=13% Similarity=0.149 Sum_probs=52.3
Q ss_pred cCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEE
Q psy6924 19 HGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKT 83 (89)
Q Consensus 19 ~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~ 83 (89)
.+|+|+... ++.|+++++ ++++||+|||+|||+||++|++++|.|++++++|+++++.||++
T Consensus 25 ~~p~f~l~~--~~~G~~v~l-~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v 86 (208)
T 2f8a_A 25 SVYAFSARP--LAGGEPVSL-GSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGF 86 (208)
T ss_dssp CGGGCEECB--TTCSSCEEG-GGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred ccCceEeee--CCCCCCccH-HHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEE
Confidence 456665322 222789999 89999999999999999999999999999999999988888875
No 6
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.65 E-value=1.4e-16 Score=103.44 Aligned_cols=63 Identities=11% Similarity=-0.036 Sum_probs=54.6
Q ss_pred ccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 18 FHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 18 ~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
-.+|+|.... ++ |+++++ ++++||+|||+||++||++|+.++|.|++++++|+++++.+|++.
T Consensus 16 ~~~p~f~l~d--~~-G~~v~l-~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is 78 (180)
T 3kij_A 16 NSFYAFEVKD--AK-GRTVSL-EKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFP 78 (180)
T ss_dssp CCGGGCEEEB--TT-SCEEEG-GGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEE
T ss_pred CcccceEEec--CC-CCEecH-HHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEE
Confidence 4667776432 34 889999 899999999999999999999999999999999999999888764
No 7
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.65 E-value=2.4e-16 Score=98.20 Aligned_cols=64 Identities=9% Similarity=0.102 Sum_probs=55.2
Q ss_pred cccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHH---HHHHhCcCCeEEEEEE
Q psy6924 17 IFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPIL---IRHILEYKRTHIIKTF 84 (89)
Q Consensus 17 ~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~---l~~~~~~~~~~vi~~~ 84 (89)
+-.+|+|.... .+ |+.+++ ++++||+|||+||++||++|+.++|.+++ ++++++++++.++++.
T Consensus 8 G~~ap~f~l~~--~~-g~~~~l-~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~ 74 (142)
T 3eur_A 8 GTKALNFTYTL--DS-GVKGTL-YQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIY 74 (142)
T ss_dssp TSBCCCCEEEE--TT-SCEEET-TTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEE
T ss_pred CCccCCcEEEc--CC-CCEeeH-HHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEE
Confidence 45788887433 34 889999 89999999999999999999999999999 9999998888888753
No 8
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.64 E-value=1.2e-16 Score=104.56 Aligned_cols=65 Identities=11% Similarity=0.012 Sum_probs=55.6
Q ss_pred ccccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 16 AIFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 16 ~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
....+|+|+... ++ |+++++ ++++||+|||+||++||++|+.++|.|++++++|+++++.+|++.
T Consensus 22 ~~~~~p~f~l~d--~~-G~~~~l-~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is 86 (187)
T 3dwv_A 22 AASSIFDFEVLD--AD-HKPYNL-VQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFP 86 (187)
T ss_dssp TCCSGGGSCCBB--TT-SCBCCG-GGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEE
T ss_pred CCCccCCeEEEc--CC-CCEeeH-HHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEE
Confidence 344677776433 34 899999 899999999999999999999999999999999999988888763
No 9
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.62 E-value=6.2e-16 Score=97.23 Aligned_cols=52 Identities=17% Similarity=0.275 Sum_probs=47.8
Q ss_pred CCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 32 TTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 32 ~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
.|+++++ ++++||+|||+||++||++|+.++|.+++++++++++++.++++-
T Consensus 13 ~G~~~~l-~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~ 64 (151)
T 3raz_A 13 DNTPQSL-QSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIA 64 (151)
T ss_dssp TCCEECG-GGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEE
T ss_pred CCCEecH-HHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEE
Confidence 3899999 899999999999999999999999999999999988888887653
No 10
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.62 E-value=3.8e-16 Score=105.65 Aligned_cols=63 Identities=13% Similarity=0.022 Sum_probs=53.3
Q ss_pred ccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 18 FHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 18 ~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
..+|+|+... ++.|+++++ ++++||+|||+|||+||++|+ ++|.|++++++|+++++.||++.
T Consensus 33 ~~~pdF~l~d--~~~G~~v~L-sd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs 95 (215)
T 2i3y_A 33 GTIYDYEAIA--LNKNEYVSF-KQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFP 95 (215)
T ss_dssp CCGGGCEEEB--SSSSCEEEG-GGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEE
T ss_pred CCcCCcEeee--CCCCCEEcH-HHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEE
Confidence 3567776332 222789999 899999999999999999999 99999999999999999999774
No 11
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.62 E-value=7.5e-16 Score=97.62 Aligned_cols=66 Identities=18% Similarity=0.109 Sum_probs=55.7
Q ss_pred ccccccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEE
Q psy6924 14 LVAIFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKT 83 (89)
Q Consensus 14 ~~~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~ 83 (89)
....-.+|+|.... .+ |+.+++ ++++||++||+||++||++|+.++|.+++++++|+++++.++++
T Consensus 9 ~~~g~~~p~f~l~~--~~-G~~~~l-~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i 74 (152)
T 2lrt_A 9 KIKEASIIDIQLKD--LK-GNTRSL-TDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQI 74 (152)
T ss_dssp SSCTTCSCCCCEEB--TT-SCEECT-TTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred hccCCCCCCeEEEc--CC-CCEEeH-HHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEE
Confidence 33445788887433 33 889999 88999999999999999999999999999999999988887765
No 12
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.61 E-value=5.8e-16 Score=98.32 Aligned_cols=63 Identities=14% Similarity=0.056 Sum_probs=53.8
Q ss_pred ccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 18 FHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 18 ~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
-.+|+|.... .+ |+++++ ++++||++||+||++||++|+.++|.+++++++|+++++.++++.
T Consensus 9 ~~~p~f~l~~--~~-G~~~~l-~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~ 71 (169)
T 2v1m_A 9 NSIYEFTVKD--IN-GVDVSL-EKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFP 71 (169)
T ss_dssp CSGGGCEEEB--TT-SCEEEG-GGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred cccccceeec--CC-CCCccH-HHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEE
Confidence 4567776332 33 889999 899999999999999999999999999999999999888888664
No 13
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.61 E-value=6.8e-16 Score=95.72 Aligned_cols=62 Identities=16% Similarity=0.305 Sum_probs=53.2
Q ss_pred ccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHH---HHHHhCcCCeEEEEE
Q psy6924 18 FHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPIL---IRHILEYKRTHIIKT 83 (89)
Q Consensus 18 ~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~---l~~~~~~~~~~vi~~ 83 (89)
-.+|+|.... .+ |+.+++ ++++||++||+||++||++|+.++|.+.+ ++++++++++.++++
T Consensus 5 ~~~p~f~l~~--~~-g~~~~l-~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v 69 (142)
T 3ewl_A 5 MKAADFTYVT--VH-GDNSRM-SRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAI 69 (142)
T ss_dssp SBCCCCEEEC--TT-CCEEEG-GGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEE
T ss_pred CcCCCCEEEC--CC-CCEEEh-hhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEE
Confidence 4678886432 34 889999 89999999999999999999999999998 999999888887765
No 14
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.61 E-value=6.1e-16 Score=98.30 Aligned_cols=63 Identities=14% Similarity=0.070 Sum_probs=53.6
Q ss_pred cccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEE
Q psy6924 17 IFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKT 83 (89)
Q Consensus 17 ~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~ 83 (89)
+-.+|+|.... .+ |+++++ ++++||+|||+||++||++|+.++|.|++++++|+++++.++++
T Consensus 9 g~~~p~f~l~~--~~-g~~~~l-~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v 71 (170)
T 2p5q_A 9 PESVHDFTVKD--AK-ENDVDL-SIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAF 71 (170)
T ss_dssp -CCGGGCEEEB--TT-SCEEEG-GGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CccccceEEEc--CC-CCEecH-HHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEE
Confidence 34677776332 34 889999 89999999999999999999999999999999999988888865
No 15
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.60 E-value=7.2e-16 Score=100.27 Aligned_cols=64 Identities=9% Similarity=-0.006 Sum_probs=54.1
Q ss_pred cccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 17 IFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 17 ~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
+-.+|+|.... ++ |+++++ ++++||+|||+||++||++|+.++|.|++++++|+++++.++++.
T Consensus 26 g~~~p~f~l~~--~~-G~~~~l-~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs 89 (181)
T 2p31_A 26 EQDFYDFKAVN--IR-GKLVSL-EKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFP 89 (181)
T ss_dssp -CCGGGCEEEB--TT-SCEEEG-GGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred CCccCceEeec--CC-CCEecH-HHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEE
Confidence 44677776432 33 889999 899999999999999999999999999999999999888888663
No 16
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.60 E-value=7.9e-16 Score=103.32 Aligned_cols=62 Identities=8% Similarity=-0.100 Sum_probs=52.5
Q ss_pred cCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 19 HGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 19 ~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
.+|+|+... ++.|+.+++ ++++||+|||+|||+||++| .++|.|++++++|+++++.||++.
T Consensus 16 ~~pdF~l~d--~~~G~~v~L-s~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs 77 (207)
T 2r37_A 16 TIYEYGALT--IDGEEYIPF-KQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFP 77 (207)
T ss_dssp CGGGCEEEB--TTSSCEEEG-GGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEE
T ss_pred ccCCeEeee--CCCCCEEcH-HHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEE
Confidence 567776332 221789999 89999999999999999999 799999999999999999998774
No 17
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.59 E-value=1.1e-15 Score=98.17 Aligned_cols=62 Identities=13% Similarity=0.029 Sum_probs=52.3
Q ss_pred ccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 18 FHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 18 ~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
..+|+|.... .+ |+++++ ++++||+|||+||++||++|+ ++|.|++++++|+++++.++++.
T Consensus 10 ~~~~~f~l~d--~~-G~~~~l-~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs 71 (171)
T 3cmi_A 10 SEFYKLAPVD--KK-GQPFPF-DQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFP 71 (171)
T ss_dssp CGGGGCCCBB--TT-SCBCCG-GGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEE
T ss_pred hheeeeEEEc--CC-CCEecH-HHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEE
Confidence 3456665332 23 889999 899999999999999999999 99999999999999888888763
No 18
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.59 E-value=1.5e-15 Score=99.11 Aligned_cols=64 Identities=8% Similarity=-0.029 Sum_probs=54.5
Q ss_pred cccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 17 IFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 17 ~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
+-.+|+|.... ++ |+++++ ++++||++||+||++||++|+.++|.|++++++|+++++.++++.
T Consensus 26 g~~~p~f~l~~--~~-G~~v~l-~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is 89 (185)
T 2gs3_A 26 ARSMHEFSAKD--ID-GHMVNL-DKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFP 89 (185)
T ss_dssp CCCGGGCEEEB--TT-SCEEEG-GGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred CCCcCCceeEc--CC-CCEeeH-HHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEE
Confidence 34677776332 33 889999 899999999999999999999999999999999999888888763
No 19
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.59 E-value=1.7e-15 Score=93.78 Aligned_cols=66 Identities=14% Similarity=0.087 Sum_probs=56.1
Q ss_pred ccccccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEE
Q psy6924 14 LVAIFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKT 83 (89)
Q Consensus 14 ~~~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~ 83 (89)
+..+-.+|+|.... .+ |+.+++ ++++||++||+||++||++|+.++|.+++++++|+++++.++.+
T Consensus 5 ~~~G~~~p~~~l~~--~~-g~~~~l-~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v 70 (148)
T 3hcz_A 5 LLLGKKAPNLYMTD--TT-GTYRYL-YDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAA 70 (148)
T ss_dssp CCTTSBCCCCCCBC--TT-SCBCCG-GGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEE
T ss_pred cCCCCcCCceEEec--CC-CCEEEh-HHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEE
Confidence 44456788887433 34 889999 89999999999999999999999999999999999988877765
No 20
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.58 E-value=3.1e-15 Score=96.74 Aligned_cols=69 Identities=16% Similarity=0.209 Sum_probs=56.1
Q ss_pred cccccccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCe------EEEEE
Q psy6924 13 PLVAIFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRT------HIIKT 83 (89)
Q Consensus 13 p~~~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~------~vi~~ 83 (89)
+...+-.+|+|.... ..+.|+++++ ++++||++||+||++||++|+.++|.|++++++|+++++ .++++
T Consensus 30 ~~~~g~~~p~f~l~~-~~~~g~~~~l-~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v 104 (183)
T 3lwa_A 30 DEADRQQLPDIGGDS-LMEEGTQINL-SDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGI 104 (183)
T ss_dssp CGGGCCCCCCCEEEB-SSSTTCEEEG-GGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEE
T ss_pred ccccCCCCCceeccc-cccCCcEecH-HHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEE
Confidence 345556788887432 2213899999 899999999999999999999999999999999998877 77755
No 21
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.58 E-value=3.7e-15 Score=93.74 Aligned_cols=63 Identities=19% Similarity=0.236 Sum_probs=53.6
Q ss_pred cccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEE
Q psy6924 17 IFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKT 83 (89)
Q Consensus 17 ~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~ 83 (89)
+-.+|+|.... .+ |+++++ ++++||+++|+||++||++|+.+.|.+++++++|+++++.++++
T Consensus 6 g~~~p~f~l~~--~~-G~~~~l-~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v 68 (152)
T 2lrn_A 6 GSVAPAITGID--LK-GNSVSL-NDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGV 68 (152)
T ss_dssp TEECCCCEEEC--SS-SCEEES-GGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEE
T ss_pred CCcCCCceeEc--CC-CCEEeH-HHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEE
Confidence 34678876332 33 889999 89999999999999999999999999999999999888877765
No 22
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.57 E-value=5.5e-15 Score=106.37 Aligned_cols=71 Identities=25% Similarity=0.521 Sum_probs=59.5
Q ss_pred cccccccCCCCcccccccc--CCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 13 PLVAIFHGRDFCTKQEWMN--TTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 13 p~~~~~~ap~~~~~~~~~~--~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
.+..+-.+|+|.+...|+. .|+++++ ++++||+|||+||++||++|+.++|.|++++++|+++++.+|++.
T Consensus 50 ~l~vG~~aPdF~~~~~wL~d~dG~~vsL-sdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs 122 (352)
T 2hyx_A 50 QLESCGTAPDLKGITGWLNTPGNKPIDL-KSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVH 122 (352)
T ss_dssp SCCCCCBCCCCCSCCEEESSGGGCCCCG-GGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred ccCCCCcCCCccccccccCCCCCCEEcH-HHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEE
Confidence 3445567899985555542 2789999 899999999999999999999999999999999998888888763
No 23
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.57 E-value=3e-15 Score=98.00 Aligned_cols=63 Identities=10% Similarity=0.004 Sum_probs=53.5
Q ss_pred ccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 18 FHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 18 ~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
-.+|+|.... .+ |+++++ ++++||+|||+||++||++|+.++|.|++++++|+++++.++++.
T Consensus 26 ~~~p~f~l~~--~~-G~~~~l-~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs 88 (190)
T 2vup_A 26 SSIFDFEVLD--AD-HKPYNL-VQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFP 88 (190)
T ss_dssp CSGGGSCCBB--TT-SSBCCG-GGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEE
T ss_pred CcccCeEEEc--CC-CCEEEH-HHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEE
Confidence 3567776332 33 889999 899999999999999999999999999999999999888888653
No 24
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.57 E-value=6.6e-15 Score=92.40 Aligned_cols=64 Identities=13% Similarity=0.014 Sum_probs=54.8
Q ss_pred ccccCCCCccccccccCCCcccccc--cCCCCEEEEEEeCCCChh--hhhhccHHHHHHHHh-CcCCeEEEEE
Q psy6924 16 AIFHGRDFCTKQEWMNTTEPLSLNS--HLKNKIVIMDFFTYCCIN--CMHILPIPILIRHIL-EYKRTHIIKT 83 (89)
Q Consensus 16 ~~~~ap~~~~~~~~~~~g~~~~l~~--~~~gk~vvv~Fwa~wC~~--C~~~~p~l~~l~~~~-~~~~~~vi~~ 83 (89)
.+-.+|+|.... ++ |+++++ + +++||+|||+||++||++ |+.++|.+++++++| +++++.++++
T Consensus 7 ~G~~~p~f~l~~--~~-g~~~~l-~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v 75 (150)
T 3fw2_A 7 IGKYAPFFSLPN--AK-GEKITR-SSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGI 75 (150)
T ss_dssp TTSBCCCCCEEB--TT-CCEECT-TSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEE
T ss_pred CCCcCCccEeEC--CC-CCEEec-chhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEE
Confidence 345788887433 34 889999 8 899999999999999999 999999999999999 8888887765
No 25
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.55 E-value=1e-14 Score=91.99 Aligned_cols=64 Identities=19% Similarity=0.340 Sum_probs=54.3
Q ss_pred ccccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEE
Q psy6924 16 AIFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKT 83 (89)
Q Consensus 16 ~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~ 83 (89)
.+-.+|+|.... ++ |+.+++ ++++||++||+||++||++|+.+.|.+++++++++++++.++++
T Consensus 10 ~g~~~p~~~l~~--~~-g~~~~l-~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v 73 (165)
T 3or5_A 10 RPTPAPSFSGVT--VD-GKPFSS-ASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGI 73 (165)
T ss_dssp CCCBCCCCEEEC--TT-SCEEEG-GGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEE
T ss_pred CCCCCCCceeeC--CC-CCEech-hHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEE
Confidence 344678886432 34 889999 88999999999999999999999999999999999988777755
No 26
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.55 E-value=8.1e-15 Score=90.57 Aligned_cols=64 Identities=14% Similarity=0.306 Sum_probs=53.3
Q ss_pred cccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEE
Q psy6924 17 IFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKT 83 (89)
Q Consensus 17 ~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~ 83 (89)
+-.+|+|......++ |+.+++ ++++||+++|+||++||++|+.+.|.+++++++++++ +.++.+
T Consensus 4 g~~~P~f~~~~~~~~-g~~~~~-~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v 67 (148)
T 2b5x_A 4 RQPMPELTGEKAWLN-GEVTRE-QLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ-LNVVAV 67 (148)
T ss_dssp TCBCCCCCCCSEEES-CCCCHH-HHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEE
T ss_pred CCCCCCCcccccccc-Ccccch-hhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC-cEEEEE
Confidence 346788875334455 889999 7899999999999999999999999999999999886 666654
No 27
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.55 E-value=6.6e-15 Score=91.68 Aligned_cols=61 Identities=15% Similarity=0.057 Sum_probs=49.9
Q ss_pred cCCC-CccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc-CCeEEEEE
Q psy6924 19 HGRD-FCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEY-KRTHIIKT 83 (89)
Q Consensus 19 ~ap~-~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~-~~~~vi~~ 83 (89)
.+|+ |.... .+ |+.+++ ++++||+|||+||++||++|+.++|.++++++++++ +++.++.+
T Consensus 6 ~~P~~f~l~~--~~-g~~~~l-~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v 68 (144)
T 1i5g_A 6 FFPYSTNVLK--GA-AADIAL-PSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLI 68 (144)
T ss_dssp SCSSCSEEEE--TT-EEEEEG-GGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEE
T ss_pred hCCCceEEEc--CC-CCEecH-HHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEE
Confidence 4566 55322 23 789999 899999999999999999999999999999999985 56766654
No 28
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.55 E-value=6e-15 Score=91.33 Aligned_cols=64 Identities=14% Similarity=0.133 Sum_probs=53.9
Q ss_pred ccccCCCCccccccccCCCcccccc--cCCCCEEEEEEeCCCChhhhhhccHHHHHHHHh-CcCCeEEEEE
Q psy6924 16 AIFHGRDFCTKQEWMNTTEPLSLNS--HLKNKIVIMDFFTYCCINCMHILPIPILIRHIL-EYKRTHIIKT 83 (89)
Q Consensus 16 ~~~~ap~~~~~~~~~~~g~~~~l~~--~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~-~~~~~~vi~~ 83 (89)
.+-.+|+|.... .+ |+.+++ + +++||++||+||++||++|+.++|.+++++++| +++++.++.+
T Consensus 7 ~g~~~p~~~l~~--~~-g~~~~l-~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v 73 (148)
T 3fkf_A 7 VGKSAPYFSLPN--EK-GEKLSR-SAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGI 73 (148)
T ss_dssp TTSBCCCCCEEB--TT-SCEECT-TSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEE
T ss_pred CCCcCCCeEeeC--CC-CCEEec-cccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEE
Confidence 345788887433 34 889998 8 889999999999999999999999999999999 8877877765
No 29
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.54 E-value=1.2e-14 Score=93.95 Aligned_cols=64 Identities=14% Similarity=0.304 Sum_probs=54.1
Q ss_pred cccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 17 IFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 17 ~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
+..+|+|.... .+ |+++++ ++++||++||+||++||++|+.++|.+++++++++++++.++++.
T Consensus 37 g~~~p~f~l~~--~~-G~~~~l-~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~ 100 (186)
T 1jfu_A 37 PLKLPDLAFED--AD-GKPKKL-SDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAIN 100 (186)
T ss_dssp CCBCCCCEEEC--TT-SCEEEG-GGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEE
T ss_pred CCcCCCcEeEc--CC-CCEeeH-HHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEE
Confidence 44677876432 23 889999 899999999999999999999999999999999998888877653
No 30
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.54 E-value=1.2e-14 Score=97.36 Aligned_cols=67 Identities=10% Similarity=0.118 Sum_probs=56.8
Q ss_pred ccccccCCCCccccccccCCCcccccccCCCC-EEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 14 LVAIFHGRDFCTKQEWMNTTEPLSLNSHLKNK-IVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 14 ~~~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk-~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
+..+-.+|+|.... .+ |+++++ ++++|| +|||+||++||++|+.++|.|++++++|+++++.+|++.
T Consensus 32 l~~G~~aP~f~l~~--~~-G~~v~l-~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs 99 (218)
T 3u5r_E 32 ITLGTRAADFVLPD--AG-GNLFTL-AEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAIN 99 (218)
T ss_dssp CCTTCBCCCCCEEC--TT-CCEECG-GGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEE
T ss_pred CCCCCcCCCcEeEC--CC-CCEEeH-HHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEE
Confidence 33455788887443 34 889999 899999 599999999999999999999999999999888888764
No 31
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.54 E-value=1.4e-14 Score=90.49 Aligned_cols=64 Identities=19% Similarity=0.258 Sum_probs=54.4
Q ss_pred cccccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEE
Q psy6924 15 VAIFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKT 83 (89)
Q Consensus 15 ~~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~ 83 (89)
..+-.+|+|.... .|+.+++ ++++||++||+||++||++|+.+.|.+++++++++++++.++.+
T Consensus 4 ~~G~~~P~f~l~~----~g~~~~l-~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v 67 (152)
T 3gl3_A 4 DKGDKAPDFALPG----KTGVVKL-SDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAV 67 (152)
T ss_dssp CTTSBCCCCEEEB----SSSEEEG-GGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCCCcCCceEeeC----CCCeEeH-HHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEE
Confidence 3455788887432 3889999 89999999999999999999999999999999999988777654
No 32
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.54 E-value=2.8e-14 Score=90.30 Aligned_cols=66 Identities=17% Similarity=0.260 Sum_probs=55.7
Q ss_pred ccccccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEE
Q psy6924 14 LVAIFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKT 83 (89)
Q Consensus 14 ~~~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~ 83 (89)
+..+-.+|+|.... ++ |+.+++ ++++||++||+||++||++|+.+.|.++++++++++.++.++.+
T Consensus 15 ~~~G~~~p~f~l~~--~~-g~~~~l-~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v 80 (158)
T 3hdc_A 15 VRTGALAPNFKLPT--LS-GENKSL-AQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAV 80 (158)
T ss_dssp CCTTSBCCCCEEEC--TT-SCEEES-GGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEE
T ss_pred cCCCCcCCCceeEc--CC-CCEEeh-HHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEE
Confidence 44455788886433 34 889999 88999999999999999999999999999999999888877765
No 33
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.53 E-value=1.8e-14 Score=90.17 Aligned_cols=62 Identities=21% Similarity=0.342 Sum_probs=52.4
Q ss_pred cCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 19 HGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 19 ~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
.+|+|.... .+ |+.+++ ++++||++||+||++||++|+.+.|.+++++++++++++.++.+.
T Consensus 5 ~~p~~~l~~--~~-g~~~~l-~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~ 66 (151)
T 2f9s_A 5 DAPNFVLED--TN-GKRIEL-SDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVN 66 (151)
T ss_dssp ECCCCEEEC--TT-CCEEEG-GGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred cCCcceeEc--CC-CCEEEH-HHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEE
Confidence 567776332 23 889999 899999999999999999999999999999999998777777653
No 34
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.52 E-value=1e-14 Score=92.99 Aligned_cols=64 Identities=16% Similarity=-0.015 Sum_probs=55.0
Q ss_pred cccCCCCccccccccCCCcccccccCCCCE-EEEEEe-CCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 17 IFHGRDFCTKQEWMNTTEPLSLNSHLKNKI-VIMDFF-TYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 17 ~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~-vvv~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
+-.+|+|.... .+ |+.+++ ++++||+ |||+|| ++||++|+.++|.|++++++|+++++.+|++.
T Consensus 5 G~~~P~f~l~~--~~-G~~~~l-~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs 70 (161)
T 3drn_A 5 GDKAPLFEGIA--DN-GEKISL-SDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVS 70 (161)
T ss_dssp TSBCCCCEEEE--TT-SCEEEG-GGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEE
T ss_pred CCcCCCeEeec--CC-CCEEEH-HHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 44788887443 34 889999 8999998 999999 99999999999999999999999888887653
No 35
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.52 E-value=6.9e-15 Score=94.61 Aligned_cols=49 Identities=20% Similarity=0.246 Sum_probs=44.5
Q ss_pred CCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc-CCeEEEEE
Q psy6924 33 TEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEY-KRTHIIKT 83 (89)
Q Consensus 33 g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~-~~~~vi~~ 83 (89)
| .+++ ++++||+|||+||++||++|++++|.|++++++|++ +++.++.+
T Consensus 39 g-~v~l-~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v 88 (165)
T 3s9f_A 39 D-TADM-DSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILA 88 (165)
T ss_dssp E-EECS-GGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEE
T ss_pred C-cccH-HHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEE
Confidence 6 8999 899999999999999999999999999999999987 56777654
No 36
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.52 E-value=4.4e-14 Score=87.62 Aligned_cols=60 Identities=17% Similarity=0.135 Sum_probs=49.0
Q ss_pred cCCCC-ccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc-CCeEEEEE
Q psy6924 19 HGRDF-CTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEY-KRTHIIKT 83 (89)
Q Consensus 19 ~ap~~-~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~-~~~~vi~~ 83 (89)
.+|++ .... .+ | .+++ ++++||++||+||++||++|+.++|.++++++++++ +++.++.+
T Consensus 7 ~~p~~~~l~~--~~-g-~~~l-~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i 68 (144)
T 1o73_A 7 YLPGATNLLS--KS-G-EVSL-GSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLI 68 (144)
T ss_dssp TSCTTCCBBC--TT-S-CBCS-GGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEE
T ss_pred hCccceEeec--CC-C-cCcH-HHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEE
Confidence 56775 4322 23 7 9999 899999999999999999999999999999999983 56666654
No 37
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.52 E-value=3.6e-14 Score=92.04 Aligned_cols=64 Identities=9% Similarity=-0.017 Sum_probs=53.6
Q ss_pred ccccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 16 AIFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 16 ~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
.+-.+|+|.... .+ |+.+++ ++++||+|||+||++||++|++++|.+++++++|+++ +.++++.
T Consensus 9 ~g~~~p~f~l~~--~~-G~~~~l-~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~ 72 (188)
T 2cvb_A 9 LESPLIDAELPD--PR-GGRYRL-SQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGIN 72 (188)
T ss_dssp TTCBCCCCEEEC--TT-SCEEEG-GGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEE
T ss_pred CCCCCCCceeec--CC-CCEEeH-HHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEE
Confidence 344678886432 34 889999 8999999999999999999999999999999999987 7777653
No 38
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.51 E-value=1.1e-14 Score=92.95 Aligned_cols=68 Identities=18% Similarity=0.207 Sum_probs=56.0
Q ss_pred cccccccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCCh-hhhhhccHHHHHHHHhCcCC--eEEEEEE
Q psy6924 13 PLVAIFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCI-NCMHILPIPILIRHILEYKR--THIIKTF 84 (89)
Q Consensus 13 p~~~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~-~C~~~~p~l~~l~~~~~~~~--~~vi~~~ 84 (89)
++..+-.+|+|.... .+ |+++++ ++++||++||+||++||+ +|+.++|.|.++++++++++ +.+|++.
T Consensus 6 ~l~~g~~~p~f~l~~--~~-G~~~~l-~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is 76 (174)
T 1xzo_A 6 KDPLNYEVEPFTFQN--QD-GKNVSL-ESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFS 76 (174)
T ss_dssp CSCCCEECCCCEEEC--TT-SCEEET-GGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred cCccccccCCcEEEc--CC-CCEEeh-hhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEE
Confidence 344455788887433 34 889999 899999999999999999 99999999999999998875 7777653
No 39
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.51 E-value=1.5e-14 Score=91.80 Aligned_cols=66 Identities=8% Similarity=-0.042 Sum_probs=55.9
Q ss_pred cccccCCCCc--cccccccCCCcccccccCCCCEEEEEEeC-CCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 15 VAIFHGRDFC--TKQEWMNTTEPLSLNSHLKNKIVIMDFFT-YCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 15 ~~~~~ap~~~--~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa-~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
..+-.+|+|. ... .+ |+++++ ++++||++||+||+ +||++|+.++|.|++++++|+++++.+|++.
T Consensus 8 ~~G~~~P~f~~~l~~--~~-G~~~~l-~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs 76 (163)
T 3gkn_A 8 VLELPAATFDLPLSL--SG-GTQTTL-RAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVS 76 (163)
T ss_dssp CCCCCGGGGGCCEEC--ST-TCEECS-GGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCcCCCccccccC--CC-CCEEEH-HHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 3445677776 433 33 899999 89999999999998 9999999999999999999999998888753
No 40
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.51 E-value=1.9e-14 Score=90.91 Aligned_cols=61 Identities=13% Similarity=0.110 Sum_probs=50.3
Q ss_pred cCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChh-hhhhccHHHHHHHHhCc----CCeEEEEE
Q psy6924 19 HGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCIN-CMHILPIPILIRHILEY----KRTHIIKT 83 (89)
Q Consensus 19 ~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~-C~~~~p~l~~l~~~~~~----~~~~vi~~ 83 (89)
.+|+|.... .+ |+++++ ++++||++||+||++||++ |+.++|.|+++++++++ +++.++++
T Consensus 2 ~ap~f~l~~--~~-G~~~~l-~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~v 67 (164)
T 2ggt_A 2 LGGPFSLTT--HT-GERKTD-KDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFI 67 (164)
T ss_dssp CCCCCEEEE--TT-SCEEEG-GGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEE
T ss_pred CCCCeEEEe--CC-CCEEeH-HHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEE
Confidence 356776332 23 889999 8999999999999999998 99999999999999976 36766654
No 41
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.51 E-value=2.7e-14 Score=89.20 Aligned_cols=60 Identities=13% Similarity=0.089 Sum_probs=49.2
Q ss_pred cCCC-CccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc-CCeEEEEE
Q psy6924 19 HGRD-FCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEY-KRTHIIKT 83 (89)
Q Consensus 19 ~ap~-~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~-~~~~vi~~ 83 (89)
.+|+ |.... ++ | .+++ ++++||+++|+||++||++|+.++|.++++++++++ +++.++.+
T Consensus 7 ~~P~~f~l~~--~~-g-~~~l-~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v 68 (146)
T 1o8x_A 7 YLPGIEKLRR--GD-G-EVEV-KSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFC 68 (146)
T ss_dssp TSTTCCEEEE--TT-E-EEEG-GGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEE
T ss_pred hCCCceEEEc--CC-C-CCcH-HHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEE
Confidence 4666 55322 34 7 9999 899999999999999999999999999999999984 56666654
No 42
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.50 E-value=3.4e-15 Score=95.63 Aligned_cols=64 Identities=16% Similarity=0.122 Sum_probs=50.0
Q ss_pred cccCCCCccccccccCCCcccccccCCCCEEEEEEe-CCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 17 IFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFF-TYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 17 ~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
+-+||+|+... .+ |+++++ ++++||+|||+|| ++||++|+.++|.++++++++++.++.++++.
T Consensus 7 G~~aPdF~l~~--~~-G~~~~l-~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs 71 (157)
T 4g2e_A 7 GELAPDFELPD--TE-LKKVKL-SALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGIS 71 (157)
T ss_dssp TSBCCCCEEEB--TT-SCEEEG-GGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEE
T ss_pred CCCCcCeEeEC--CC-CCEEeH-HHHCCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeec
Confidence 45789997443 23 899999 8999999999999 99999999999999999999999999888764
No 43
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.50 E-value=4.8e-14 Score=88.16 Aligned_cols=62 Identities=24% Similarity=0.426 Sum_probs=53.3
Q ss_pred ccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEE
Q psy6924 18 FHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKT 83 (89)
Q Consensus 18 ~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~ 83 (89)
-.+|+|.... .+ |+.+++ ++++||++||+||++||++|+.+.|.+++++++++++++.++.+
T Consensus 6 ~~~p~~~l~~--~~-g~~~~l-~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v 67 (154)
T 3kcm_A 6 NPAPDFTLNT--LN-GEVVKL-SDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCV 67 (154)
T ss_dssp SBCCCCEEEC--TT-SCEEEG-GGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEE
T ss_pred CCCCCeEEEc--CC-CCEEeh-hhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEE
Confidence 4678886433 33 889999 88999999999999999999999999999999999888777765
No 44
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.50 E-value=2.9e-14 Score=89.00 Aligned_cols=62 Identities=23% Similarity=0.339 Sum_probs=52.3
Q ss_pred ccCC-CCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEE
Q psy6924 18 FHGR-DFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKT 83 (89)
Q Consensus 18 ~~ap-~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~ 83 (89)
-.+| +|.... .+ |+.+++ ++++||+++|+||++||++|+.+.|.+++++++++++++.++.+
T Consensus 7 ~~~p~~f~l~~--~~-g~~~~l-~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v 69 (152)
T 2lja_A 7 NPSAASFSYPD--IN-GKTVSL-ADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSL 69 (152)
T ss_dssp CCCSSSCEEEE--TT-TEEEES-TTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEE
T ss_pred CCCCcccEeec--CC-CCEeeH-HHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEE
Confidence 3567 775322 23 889999 88999999999999999999999999999999999888877765
No 45
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.49 E-value=1.5e-14 Score=97.77 Aligned_cols=69 Identities=13% Similarity=0.058 Sum_probs=56.6
Q ss_pred ccccccCCCCccccccccCC--CcccccccC-CCCEEEEEEe-CCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 14 LVAIFHGRDFCTKQEWMNTT--EPLSLNSHL-KNKIVIMDFF-TYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 14 ~~~~~~ap~~~~~~~~~~~g--~~~~l~~~~-~gk~vvv~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
+..+-.+|+|.....+.+ | +++++ +++ +||+|||+|| ++||++|+.++|.|++++++|+++++.+|++.
T Consensus 25 l~~G~~aP~F~l~~~~~~-G~~~~v~L-~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is 97 (221)
T 2c0d_A 25 SLVTKKAYNFTAQGLNKN-NEIINVDL-SSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGIS 97 (221)
T ss_dssp -CTTSBCCCCEEEEECTT-SCEEEEEG-GGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEE
T ss_pred CCCCCCCCCeEEeccccC-CCccEEeH-HHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 444567899974332113 7 89999 898 9999999999 99999999999999999999998888888664
No 46
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.49 E-value=4.5e-14 Score=86.93 Aligned_cols=62 Identities=19% Similarity=0.272 Sum_probs=51.4
Q ss_pred cccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEE
Q psy6924 17 IFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKT 83 (89)
Q Consensus 17 ~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~ 83 (89)
+-.+|++.... ++ |+.+++ ++ +||++||+||++||++|+.++|.+++++++++++++.++.+
T Consensus 12 g~~~p~~~l~~--~~-g~~~~l-~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v 73 (145)
T 3erw_A 12 PAVPAVFLMKT--IE-GEDISI-PN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTV 73 (145)
T ss_dssp CCSCCEEEEEC--TT-SCEEEE-SC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEE
T ss_pred CCcCCCceeec--CC-CCEEeH-HH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 44677776322 33 889999 67 99999999999999999999999999999999777777755
No 47
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.49 E-value=2.1e-14 Score=96.19 Aligned_cols=69 Identities=9% Similarity=0.045 Sum_probs=56.8
Q ss_pred ccccccCCCCcccccccc-CCCcccccccCCCCEEEEEEe-CCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 14 LVAIFHGRDFCTKQEWMN-TTEPLSLNSHLKNKIVIMDFF-TYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 14 ~~~~~~ap~~~~~~~~~~-~g~~~~l~~~~~gk~vvv~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
+..+-.+|+|.... +.+ .|+++++ ++++||++||+|| ++||++|+.++|.|++++++|+++++.+|++.
T Consensus 19 ~~~G~~aP~f~l~~-~~~~~g~~v~l-~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is 89 (211)
T 2pn8_A 19 YFQSMPAPYWEGTA-VIDGEFKELKL-TDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACS 89 (211)
T ss_dssp CCSSCBCCCCEEEE-EETTEEEEEEG-GGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEE
T ss_pred CCCCCcCCCeEeec-ccCCCCcEEEH-HHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 34455789987432 112 2579999 8999999999999 99999999999999999999998888888764
No 48
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.48 E-value=2.8e-14 Score=90.10 Aligned_cols=51 Identities=18% Similarity=0.297 Sum_probs=46.9
Q ss_pred CCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 33 TEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 33 g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
|+.+++ ++++||++||+||++||++|+.++|.+++++++|+++++.+|++.
T Consensus 28 g~~~~~-~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~ 78 (164)
T 2h30_A 28 NRPASV-YLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVA 78 (164)
T ss_dssp SSBGGG-GCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEE
T ss_pred CCEeeH-HHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEE
Confidence 888998 789999999999999999999999999999999988888887664
No 49
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.48 E-value=2.1e-14 Score=96.60 Aligned_cols=69 Identities=13% Similarity=0.149 Sum_probs=56.6
Q ss_pred ccccccCCCCcccccccc-CCCcccccccCCCCEEEEEEeC-CCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 14 LVAIFHGRDFCTKQEWMN-TTEPLSLNSHLKNKIVIMDFFT-YCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 14 ~~~~~~ap~~~~~~~~~~-~g~~~~l~~~~~gk~vvv~Fwa-~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
+..+-.+|+|... .+.+ .|+++++ ++++||+|||+||+ +||++|+.++|.|++++++|+++++.+|++.
T Consensus 40 l~~G~~aP~f~l~-~~~d~~G~~v~l-~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is 110 (222)
T 3ztl_A 40 LLPNRPAPEFKGQ-AVINGEFKEICL-KDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACS 110 (222)
T ss_dssp CCSSEECCCCEEE-EEETTEEEEEEG-GGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEE
T ss_pred ccCCCCCCCeEEe-cccCCCCcEEeH-HHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 3445578999743 2212 2589999 89999999999996 9999999999999999999999888888653
No 50
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.48 E-value=3.7e-14 Score=90.14 Aligned_cols=63 Identities=24% Similarity=0.251 Sum_probs=51.9
Q ss_pred cccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChh-hhhhccHHHHHHHHhCcC---CeEEEEEE
Q psy6924 17 IFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCIN-CMHILPIPILIRHILEYK---RTHIIKTF 84 (89)
Q Consensus 17 ~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~-C~~~~p~l~~l~~~~~~~---~~~vi~~~ 84 (89)
+-.+|+|.... .+ | ++++ ++++||++||+||++||++ |+.++|.+++++++++++ ++.++++.
T Consensus 13 G~~~p~f~l~~--~~-g-~~~l-~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is 79 (172)
T 2k6v_A 13 NPKPVDFALEG--PQ-G-PVRL-SQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVS 79 (172)
T ss_dssp EEEECCCEEEC--SS-S-EEEG-GGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEE
T ss_pred CCCCCCeEEEc--CC-C-CCcH-HHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEE
Confidence 34588886433 34 8 9999 8999999999999999997 999999999999999875 57776553
No 51
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.47 E-value=4.1e-14 Score=89.42 Aligned_cols=65 Identities=15% Similarity=0.085 Sum_probs=54.5
Q ss_pred ccccCCCCccccccccCCCcccccccCCCC-EEEEEEe-CCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 16 AIFHGRDFCTKQEWMNTTEPLSLNSHLKNK-IVIMDFF-TYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 16 ~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk-~vvv~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
.+-.+|+|.... .+ |+.+++ ++++|| ++||+|| ++||++|+.++|.+++++++++++++.++++.
T Consensus 11 ~G~~~p~f~l~~--~~-G~~~~l-~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is 77 (160)
T 1xvw_A 11 VGATAPDFTLRD--QN-QQLVTL-RGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAIS 77 (160)
T ss_dssp TTSBCCCCEEEC--TT-SCEEEG-GGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEE
T ss_pred CCCCCCCeEeEc--CC-CCEEeH-HHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEe
Confidence 344678886432 23 889999 899998 9999998 99999999999999999999998888887653
No 52
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.47 E-value=5.2e-14 Score=87.93 Aligned_cols=63 Identities=16% Similarity=0.331 Sum_probs=53.7
Q ss_pred ccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 18 FHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 18 ~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
-.+|+|.... .+ |+.+++ ++++||++||+||++||++|+.+.|.+++++++++++++.++.+.
T Consensus 6 ~~~p~~~l~~--~~-g~~~~l-~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~ 68 (153)
T 2l5o_A 6 KTAPAFSLPD--LH-GKTVSN-ADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVA 68 (153)
T ss_dssp TTCCSCEEEC--TT-SCEEEH-HHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEE
T ss_pred CCCCCcEeec--CC-CCCccH-HHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEe
Confidence 3677876432 23 889999 789999999999999999999999999999999999888887654
No 53
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.47 E-value=9.3e-14 Score=84.20 Aligned_cols=59 Identities=22% Similarity=0.295 Sum_probs=48.9
Q ss_pred CCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEE
Q psy6924 20 GRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKT 83 (89)
Q Consensus 20 ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~ 83 (89)
+|+|.... .+ |+.+++ ++++||++||+||++||++|+.+.|.+++++++++ +++.++.+
T Consensus 2 ~p~f~l~~--~~-g~~~~l-~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~v~i 60 (138)
T 4evm_A 2 VADFELMG--VD-GKTYRL-SDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAG-DDYVVLTV 60 (138)
T ss_dssp CCCCEEEB--TT-SCEEEG-GGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCT-TTEEEEEE
T ss_pred CCcceeEC--CC-CCEEEH-HHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhC-CCcEEEEE
Confidence 56776332 23 889999 88999999999999999999999999999999965 45777765
No 54
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.47 E-value=5.4e-14 Score=89.43 Aligned_cols=59 Identities=17% Similarity=0.181 Sum_probs=49.0
Q ss_pred CCCccccccccCCCcccccccCCCCEEEEEEeCCCChh-hhhhccHHHHHHHHhCc----CCeEEEEE
Q psy6924 21 RDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCIN-CMHILPIPILIRHILEY----KRTHIIKT 83 (89)
Q Consensus 21 p~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~-C~~~~p~l~~l~~~~~~----~~~~vi~~ 83 (89)
|+|.... .+ |+++++ ++++||++||+||++||++ |+.++|.|++++++|++ +++.++++
T Consensus 7 p~f~l~~--~~-G~~~~l-~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~i 70 (171)
T 2rli_A 7 GDFHLLD--HR-GRARCK-ADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFI 70 (171)
T ss_dssp SCCEEEE--TT-SCEEET-TTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEE
T ss_pred CCeEEEe--CC-CCEEeH-HHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEE
Confidence 6665332 23 889999 8999999999999999998 99999999999999964 46776654
No 55
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.47 E-value=5e-14 Score=89.40 Aligned_cols=61 Identities=16% Similarity=0.326 Sum_probs=50.9
Q ss_pred cccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEE
Q psy6924 17 IFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKT 83 (89)
Q Consensus 17 ~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~ 83 (89)
+-.+|+|.... ++ |+.+++ ++++||++||+||++||++|+.++|.+++++++++ ++.++.+
T Consensus 14 g~~~p~~~l~~--~~-g~~~~l-~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i 74 (165)
T 3ha9_A 14 LEREASFSLTT--ID-GEVISL-NNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAI 74 (165)
T ss_dssp HHHHHCCCEEB--TT-SCEECG-GGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEE
T ss_pred cCcCCCCEeec--CC-CCEeeH-HHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEE
Confidence 34567776333 34 889999 89999999999999999999999999999999998 6666654
No 56
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.47 E-value=4e-14 Score=92.09 Aligned_cols=65 Identities=11% Similarity=0.114 Sum_probs=53.8
Q ss_pred cccCCCCccccccccCCCcccccccCCCC-EEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 17 IFHGRDFCTKQEWMNTTEPLSLNSHLKNK-IVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 17 ~~~ap~~~~~~~~~~~g~~~~l~~~~~gk-~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
+-.+|+|.... ..+ |+++++ ++++|| ++||+||++||++|+.++|.|++++++|+++++.++++.
T Consensus 21 g~~~p~f~l~~-~~~-G~~~~l-~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~ 86 (196)
T 2ywi_A 21 GKQAPPFALTN-VID-GNVVRL-EDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAIN 86 (196)
T ss_dssp TCBCCCCEEEE-TTT-CCEEEH-HHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEE
T ss_pred CCcCCceeeee-cCC-CCEEeH-HHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEE
Confidence 44678886430 234 889999 899998 599999999999999999999999999998888877654
No 57
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.47 E-value=4e-14 Score=90.78 Aligned_cols=69 Identities=16% Similarity=-0.080 Sum_probs=55.7
Q ss_pred ccccccCCCCccccccccCC--Cccccccc-CCCCEEEEEEe-CCCChhhh-hhccHHHHHHHHhCcCCeE-EEEEE
Q psy6924 14 LVAIFHGRDFCTKQEWMNTT--EPLSLNSH-LKNKIVIMDFF-TYCCINCM-HILPIPILIRHILEYKRTH-IIKTF 84 (89)
Q Consensus 14 ~~~~~~ap~~~~~~~~~~~g--~~~~l~~~-~~gk~vvv~Fw-a~wC~~C~-~~~p~l~~l~~~~~~~~~~-vi~~~ 84 (89)
+..+-.+|+|+......+ | +++++ ++ ++||+|||+|| ++||++|+ .++|.|++++++++++++. ++++.
T Consensus 4 ~~~G~~aP~f~l~~~~~~-G~~~~~~l-~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is 78 (162)
T 1tp9_A 4 IAVGDVLPDGKLAYFDEQ-DQLQEVSV-HSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCIS 78 (162)
T ss_dssp CCTTCBCCCCEEEEECTT-SCEEEEES-HHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCCCCCCCCeEEEeecCC-CCceeEeH-HHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE
Confidence 334557888874211123 7 89999 78 89999999999 89999999 9999999999999988888 88764
No 58
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.46 E-value=5.9e-14 Score=92.22 Aligned_cols=67 Identities=12% Similarity=0.010 Sum_probs=55.8
Q ss_pred cccccCCCCccccccccCC--CcccccccCCCCEEEEEEe-CCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 15 VAIFHGRDFCTKQEWMNTT--EPLSLNSHLKNKIVIMDFF-TYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 15 ~~~~~ap~~~~~~~~~~~g--~~~~l~~~~~gk~vvv~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
..+-.+|+|.... ..+ | +.+++ ++++||++||+|| ++||++|+.++|.|++++++|+++++.+|++.
T Consensus 6 ~~G~~aP~f~l~~-~~~-g~~~~v~l-~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is 75 (197)
T 1qmv_A 6 RIGKPAPDFKATA-VVD-GAFKEVKL-SDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVS 75 (197)
T ss_dssp CTTSBCCCCEEEE-EET-TEEEEEEG-GGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEE
T ss_pred cCCCCCCCeEeEe-ecC-CCccEEEH-HHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 3345789987432 223 6 89999 8999999999999 99999999999999999999998888887653
No 59
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.45 E-value=6.2e-14 Score=91.22 Aligned_cols=63 Identities=14% Similarity=0.096 Sum_probs=53.2
Q ss_pred ccCCCCccccccccCCC----cccccccCCCCEEEEEEe-CCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 18 FHGRDFCTKQEWMNTTE----PLSLNSHLKNKIVIMDFF-TYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 18 ~~ap~~~~~~~~~~~g~----~~~l~~~~~gk~vvv~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
-.+|+|.... .+ |+ ++++ ++++||++||+|| ++||++|+.++|.|++++++|+++++.++++.
T Consensus 5 ~~~P~f~l~~--~~-g~~~~~~~~l-~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs 72 (187)
T 1we0_A 5 TEVQPFRAQA--FQ-SGKDFFEVTE-ADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVS 72 (187)
T ss_dssp CBCCCCEEEE--EC-SSSCCEEEET-TTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred CcCCCeEEec--cC-CCccceEecH-HHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEE
Confidence 4678886432 23 66 8999 8999999999999 99999999999999999999998888877653
No 60
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.45 E-value=4.2e-14 Score=92.08 Aligned_cols=61 Identities=10% Similarity=-0.049 Sum_probs=53.2
Q ss_pred CCCCccccccccCCCcccccccCCCCEEEEEEe-CCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 20 GRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFF-TYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 20 ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
+|+|.... .+ |+++++ ++++||+|||.|| ++||++|+.++|.|++++++|+++++.++++.
T Consensus 31 aP~f~l~~--~~-G~~v~l-~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs 92 (179)
T 3ixr_A 31 LLNHPLML--SG-STCKTL-SDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVS 92 (179)
T ss_dssp HHHCCEEE--GG-GEEECG-GGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred CCCeeEEC--CC-CCEEeH-HHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEc
Confidence 77776433 23 889999 8999999999999 99999999999999999999999998888763
No 61
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.45 E-value=6.5e-14 Score=90.86 Aligned_cols=66 Identities=9% Similarity=-0.128 Sum_probs=54.7
Q ss_pred ccccCCCCccccccccCCCcccccccC-CCCEEEEEEe-CCCChhhhh-hccHHHHHHHHhCcCCe-EEEEEE
Q psy6924 16 AIFHGRDFCTKQEWMNTTEPLSLNSHL-KNKIVIMDFF-TYCCINCMH-ILPIPILIRHILEYKRT-HIIKTF 84 (89)
Q Consensus 16 ~~~~ap~~~~~~~~~~~g~~~~l~~~~-~gk~vvv~Fw-a~wC~~C~~-~~p~l~~l~~~~~~~~~-~vi~~~ 84 (89)
.+-.+|+|+... ..+ |+.+++ +++ +||+|||.|| ++||++|+. ++|.|++++++|+++++ .||++.
T Consensus 5 ~G~~aP~f~l~~-~~~-G~~v~L-~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is 74 (167)
T 2wfc_A 5 EGDKLPAVTVFG-ATP-NDKVNM-AELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMA 74 (167)
T ss_dssp TTCBCCCCEEES-SST-TCEEEH-HHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEE
T ss_pred CCCcCCCcEeec-CCC-CcEEeH-HHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 345788887441 123 789999 787 9999999986 999999999 99999999999998888 888764
No 62
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.44 E-value=6.1e-14 Score=92.10 Aligned_cols=66 Identities=17% Similarity=0.063 Sum_probs=54.4
Q ss_pred cccCCCCccccccccCCC---cccccccC-CCCEEEEEEe-CCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 17 IFHGRDFCTKQEWMNTTE---PLSLNSHL-KNKIVIMDFF-TYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 17 ~~~ap~~~~~~~~~~~g~---~~~l~~~~-~gk~vvv~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
+-.+|+|.... ....|+ ++++ +++ +||++||+|| ++||++|+.++|.|++++++|+++++.++++.
T Consensus 4 G~~~P~f~l~~-~~~~G~~~~~v~l-~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is 74 (198)
T 1zof_A 4 TKLAPDFKAPA-VLGNNEVDEHFEL-SKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVS 74 (198)
T ss_dssp TSBCCCCEEEE-ECTTSCEEEEEET-TTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEE
T ss_pred CCcCCceEeec-ccCCCcccceEEH-HHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEE
Confidence 34678887432 121377 8999 888 9999999999 99999999999999999999998888887663
No 63
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.44 E-value=1.2e-13 Score=88.53 Aligned_cols=65 Identities=11% Similarity=-0.000 Sum_probs=53.6
Q ss_pred ccccccCCCCccccccccCCCcccccccCCCCEEEEEEe-CCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 14 LVAIFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFF-TYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 14 ~~~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
+..+-.+|+|.... .+ |+.+++ ++++||++||+|| ++||++|+.++|.|++++++| +++.++++.
T Consensus 17 ~~~G~~~P~f~l~~--~~-G~~v~l-~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~Is 82 (165)
T 1q98_A 17 PQVGEIVENFILVG--ND-LADVAL-NDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCIS 82 (165)
T ss_dssp CCTTCBCCCCEEEC--TT-SCEEEG-GGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEEE
T ss_pred CCCCCCCCCeEEEC--CC-CCEEeh-HHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEEe
Confidence 34455788887433 23 889999 8999999999999 899999999999999999999 577777653
No 64
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.44 E-value=2e-13 Score=87.17 Aligned_cols=66 Identities=14% Similarity=-0.008 Sum_probs=53.8
Q ss_pred cccccccCCCCccccccccCCCcccccccCCCCEEEEEEeC-CCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 13 PLVAIFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFT-YCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 13 p~~~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa-~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
++..+-.+|+|.... .+ |+++++ ++++||++||+||+ +||++|+.++|.|++++++| +++.++++.
T Consensus 15 ~~~~G~~~P~f~l~~--~~-G~~v~l-~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is 81 (163)
T 1psq_A 15 QLQVGDKALDFSLTT--TD-LSKKSL-ADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVS 81 (163)
T ss_dssp CCCTTSBCCCCEEEC--TT-SCEEEG-GGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEE
T ss_pred CCCCCCCCCCEEEEc--CC-CcEeeH-HHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEE
Confidence 344455788887433 23 889999 89999999999995 99999999999999999999 577777653
No 65
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.44 E-value=1e-13 Score=91.50 Aligned_cols=67 Identities=12% Similarity=0.084 Sum_probs=55.5
Q ss_pred ccccCCCCccccccccCC--CcccccccCCCCEEEEEEe-CCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 16 AIFHGRDFCTKQEWMNTT--EPLSLNSHLKNKIVIMDFF-TYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 16 ~~~~ap~~~~~~~~~~~g--~~~~l~~~~~gk~vvv~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
.+-.+|+|.......+ | +.+++ ++++||++||+|| ++||++|+.++|.|++++++|+++++.+|++.
T Consensus 8 ~G~~aP~f~l~~~~~~-g~~~~v~l-~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is 77 (202)
T 1uul_A 8 DLHPAPDFNETALMPN-GTFKKVAL-TSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACS 77 (202)
T ss_dssp TTSBCCCCEEEEECTT-SCEEEEEG-GGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEE
T ss_pred CCCcCCCcEeeeeecC-CCccEEEH-HHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 3457889874332113 6 79999 8999999999999 99999999999999999999998888888764
No 66
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.43 E-value=1.5e-13 Score=83.82 Aligned_cols=59 Identities=15% Similarity=0.229 Sum_probs=48.0
Q ss_pred cCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEE
Q psy6924 19 HGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKT 83 (89)
Q Consensus 19 ~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~ 83 (89)
.+|++.... ++ |+.+++ ++++||+++|+||++||++|+.+.|.+++++++++ ++.++++
T Consensus 3 ~~p~~~l~~--~~-g~~~~l-~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v 61 (136)
T 1lu4_A 3 ERLQFTATT--LS-GAPFDG-ASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGI 61 (136)
T ss_dssp GGGCCEEEB--TT-SCEEEG-GGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEE
T ss_pred CCCCeEeec--CC-CCeecH-HHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEE
Confidence 456665322 23 889999 78899999999999999999999999999999997 5666654
No 67
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.43 E-value=1.3e-13 Score=87.83 Aligned_cols=65 Identities=15% Similarity=0.035 Sum_probs=53.4
Q ss_pred ccccccCCCCccccccccCCCcccccccCCCCEEEEEEeCCC-ChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 14 LVAIFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYC-CINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 14 ~~~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~w-C~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
+..+-.+|+|.... .+ |+++++ ++++||++||+||++| |++|+.++|.+++++++| +++.++++.
T Consensus 18 ~~~G~~~p~f~l~~--~~-G~~~~l-~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~is 83 (167)
T 2jsy_A 18 VKVGDQAPDFTVLT--NS-LEEKSL-ADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--GDVNVYTIS 83 (167)
T ss_dssp CCTTSCCCCCEEEB--TT-CCEEEH-HHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--SSCEEEEEE
T ss_pred cCCCCcCCceEEEC--CC-CCEeeH-HHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc--CCCEEEEEE
Confidence 44455788887432 33 889999 8999999999999999 999999999999999999 567777653
No 68
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.43 E-value=1.1e-13 Score=94.50 Aligned_cols=69 Identities=13% Similarity=0.079 Sum_probs=56.8
Q ss_pred ccccccCCCCcccccccc-CCCcccccccCCCCEEEEEEeC-CCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 14 LVAIFHGRDFCTKQEWMN-TTEPLSLNSHLKNKIVIMDFFT-YCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 14 ~~~~~~ap~~~~~~~~~~-~g~~~~l~~~~~gk~vvv~Fwa-~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
+..+-.+|+|.... +.+ .|+++++ ++++||+|||+||+ +||++|..++|.|++++++|+++++.+|++.
T Consensus 48 l~vG~~aPdF~l~~-~~d~~G~~vsL-sd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is 118 (240)
T 3qpm_A 48 AKISKPAPQWEGTA-VINGEFKELKL-SDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACS 118 (240)
T ss_dssp CCTTSBCCCCEEEE-EETTEEEEEEG-GGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred CCCCCCCCCcEeee-eeCCCCcEEEH-HHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 33456789997432 222 2569999 89999999999999 9999999999999999999999998888764
No 69
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.15 E-value=1e-14 Score=92.17 Aligned_cols=64 Identities=20% Similarity=0.255 Sum_probs=52.0
Q ss_pred ccccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHH-HHHHhC-cCCeEEEEE
Q psy6924 16 AIFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPIL-IRHILE-YKRTHIIKT 83 (89)
Q Consensus 16 ~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~-l~~~~~-~~~~~vi~~ 83 (89)
.+-.+|+|.... .+ |+.+++ ++++||+++|+||++||++|+.++|.+++ ++++++ +.++.++++
T Consensus 9 ~g~~~p~f~l~~--~~-g~~~~l-~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v 74 (159)
T 2ls5_A 9 IGEMAPDFTITL--TD-GKQVTL-SSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGI 74 (159)
Confidence 345677776332 23 889999 88999999999999999999999999998 998888 666666654
No 70
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.43 E-value=6.2e-14 Score=89.02 Aligned_cols=65 Identities=9% Similarity=-0.037 Sum_probs=53.7
Q ss_pred ccccccCCCCccccccccCCCcccccccCCCC--EEEEEEe-CCCChhhhhhccHHHHHHHHhCcCCeEEEEE
Q psy6924 14 LVAIFHGRDFCTKQEWMNTTEPLSLNSHLKNK--IVIMDFF-TYCCINCMHILPIPILIRHILEYKRTHIIKT 83 (89)
Q Consensus 14 ~~~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk--~vvv~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~ 83 (89)
+..+-.+|+|.... .+ |+++++ ++++|| +|||+|| ++||++|+.++|.|++++++|++++ .++++
T Consensus 7 ~~~G~~~P~f~l~~--~~-G~~v~l-~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~i 74 (159)
T 2a4v_A 7 LEIGDPIPDLSLLN--ED-NDSISL-KKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGL 74 (159)
T ss_dssp CCTTCBCCSCEEEC--TT-SCEEEH-HHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEE
T ss_pred CCCCCCCCCeEEEC--CC-CCEEeH-HHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEE
Confidence 44455788887433 23 889999 888887 8999997 9999999999999999999999888 77765
No 71
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.42 E-value=9.6e-14 Score=91.09 Aligned_cols=50 Identities=10% Similarity=0.118 Sum_probs=46.1
Q ss_pred CcccccccCCCCEEEEEEe-CCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 34 EPLSLNSHLKNKIVIMDFF-TYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 34 ~~~~l~~~~~gk~vvv~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
+++++ ++++||++||+|| ++||++|+.++|.|++++++|+++++.++++.
T Consensus 36 ~~v~l-~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs 86 (195)
T 2bmx_A 36 TTITS-DEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVS 86 (195)
T ss_dssp EEEET-TSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEE
T ss_pred cEeeH-HHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 68999 8999999999999 99999999999999999999998888887653
No 72
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.42 E-value=1.2e-13 Score=92.48 Aligned_cols=68 Identities=9% Similarity=0.079 Sum_probs=56.1
Q ss_pred cccccCCCCccccccccCC--CcccccccC-CCCEEEEEEe-CCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 15 VAIFHGRDFCTKQEWMNTT--EPLSLNSHL-KNKIVIMDFF-TYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 15 ~~~~~ap~~~~~~~~~~~g--~~~~l~~~~-~gk~vvv~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
..+-.+|+|.......+ | +.+++ +++ +||++||+|| ++||++|+.++|.|++++++|+++++.+|++.
T Consensus 22 ~~G~~aP~f~l~~~~~~-G~~~~v~l-~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is 93 (213)
T 2i81_A 22 YVGKEAPFFKAEAVFGD-NSFGEVNL-TQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCS 93 (213)
T ss_dssp CBTSBCCCCEEEEECTT-SCEEEEEG-GGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEE
T ss_pred cCCCcCCCeEeeccccC-CceeEEeH-HHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 34457899874332113 7 79999 898 9999999999 99999999999999999999998888888764
No 73
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.42 E-value=2.7e-13 Score=87.78 Aligned_cols=63 Identities=14% Similarity=0.088 Sum_probs=49.9
Q ss_pred ccccccCCCCccccccccCC--CcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 14 LVAIFHGRDFCTKQEWMNTT--EPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 14 ~~~~~~ap~~~~~~~~~~~g--~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
+..+-.+|+|.... .+ | +.+++ ++++||++||+||++||++|+.++|.+++++++ ++.++++.
T Consensus 30 ~~~G~~~P~f~l~~--~~-g~~~~~~l-~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~vs 94 (176)
T 3kh7_A 30 ALIGKPFPAFDLPS--VQ-DPARRLTE-ADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ----GVVIYGIN 94 (176)
T ss_dssp TTTTSBCCCCEEEB--SS-CTTSEEEG-GGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCEEEEEE
T ss_pred cccCCcCCCcEecc--cC-CCCceecH-HHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC----CCEEEEEe
Confidence 34455788887432 23 4 78998 899999999999999999999999999999876 46666543
No 74
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.42 E-value=2.5e-13 Score=82.55 Aligned_cols=59 Identities=14% Similarity=0.214 Sum_probs=48.1
Q ss_pred cCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEE
Q psy6924 19 HGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKT 83 (89)
Q Consensus 19 ~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~ 83 (89)
.+|++.... ++ |+.+++ ++++||+++|+||++||++|+.+.|.+++++++++ ++.++.+
T Consensus 4 ~~p~~~~~~--~~-g~~~~l-~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v 62 (136)
T 1zzo_A 4 AQLQFSAKT--LD-GHDFHG-ESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGV 62 (136)
T ss_dssp GGGCCEEEB--TT-SCEEEG-GGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEE
T ss_pred CCCCccccc--CC-CCEeeH-HHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEE
Confidence 456665322 33 889999 78899999999999999999999999999999998 5555544
No 75
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.41 E-value=1.5e-13 Score=92.39 Aligned_cols=69 Identities=12% Similarity=0.084 Sum_probs=56.5
Q ss_pred ccccccCCCCcccccccc-CCCcccccccCCCCEEEEEEe-CCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 14 LVAIFHGRDFCTKQEWMN-TTEPLSLNSHLKNKIVIMDFF-TYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 14 ~~~~~~ap~~~~~~~~~~-~g~~~~l~~~~~gk~vvv~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
+..+-.+|+|.... +.+ .|+++++ ++++||++||+|| ++||++|+.++|.|++++++|+++++.+|++.
T Consensus 27 l~~G~~aP~f~l~~-~~~~~g~~v~l-~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is 97 (220)
T 1zye_A 27 PAVTQHAPYFKGTA-VVSGEFKEISL-DDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVS 97 (220)
T ss_dssp CCTTSBCCCCEEEE-ECSSSEEEEEG-GGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred ccCCCCCCCcEEEe-eeCCCCcEEEH-HHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 33455789987432 222 3678999 8999999999999 99999999999999999999998888888663
No 76
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.41 E-value=1.1e-13 Score=90.44 Aligned_cols=65 Identities=12% Similarity=0.136 Sum_probs=53.8
Q ss_pred ccCCCCccccccccCC--CcccccccC-CCCEEEEEEe-CCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 18 FHGRDFCTKQEWMNTT--EPLSLNSHL-KNKIVIMDFF-TYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 18 ~~ap~~~~~~~~~~~g--~~~~l~~~~-~gk~vvv~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
-.+|+|.......+ | +.+++ +++ +||++||+|| ++||++|+.++|.|++++++|+++++.+|++.
T Consensus 4 ~~aP~f~l~~~~~~-G~~~~~~l-~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is 72 (192)
T 2h01_A 4 GQAPSFKAEAVFGD-NTFGEVSL-SDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCS 72 (192)
T ss_dssp SBCCCCEEEEECTT-SCEEEEEG-GGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEE
T ss_pred CcCCCcEeEeeecC-CceeEEeH-HHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 36788874322113 7 79999 888 9999999999 99999999999999999999988888887653
No 77
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.41 E-value=1.4e-13 Score=90.23 Aligned_cols=64 Identities=6% Similarity=-0.050 Sum_probs=53.5
Q ss_pred ccCCCCccccccccCC--CcccccccCCCCEEEEEEeC-CCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 18 FHGRDFCTKQEWMNTT--EPLSLNSHLKNKIVIMDFFT-YCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 18 ~~ap~~~~~~~~~~~g--~~~~l~~~~~gk~vvv~Fwa-~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
-.+|+|+... .+.| +++++ ++++||+|||+||+ +||++|+.++|.|++++++|+++++.++++.
T Consensus 5 ~~aP~f~l~~--~~~G~~~~v~l-~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is 71 (186)
T 1n8j_A 5 TKIKPFKNQA--FKNGEFIEVTE-KDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVS 71 (186)
T ss_dssp CBCCCCEEEE--EETTEEEEEEH-HHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred CcCCCcEeec--ccCCcceEEEH-HHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 4678887432 2126 78999 89999999999995 9999999999999999999998888888764
No 78
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.40 E-value=1.7e-13 Score=90.54 Aligned_cols=60 Identities=20% Similarity=0.167 Sum_probs=49.2
Q ss_pred CCCCccccccccCCCcccccccCCCCEEEEEEeCCCChh-hhhhccHHHHHHHHhCc---CCeEEEEE
Q psy6924 20 GRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCIN-CMHILPIPILIRHILEY---KRTHIIKT 83 (89)
Q Consensus 20 ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~-C~~~~p~l~~l~~~~~~---~~~~vi~~ 83 (89)
+|+|.... .+ |+++++ ++++||++||+||++||++ |+.++|.|+++++++++ .++.++++
T Consensus 21 ~p~f~l~d--~~-G~~v~l-~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~I 84 (200)
T 2b7k_A 21 GGPFHLED--MY-GNEFTE-KNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFI 84 (200)
T ss_dssp CCCCEEEE--TT-SCEEEG-GGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_pred CCCEEEEc--CC-CCEEeH-HHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEE
Confidence 47776432 23 889999 8999999999999999997 99999999999988874 36666654
No 79
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.40 E-value=2e-14 Score=92.84 Aligned_cols=64 Identities=17% Similarity=0.170 Sum_probs=55.3
Q ss_pred cccCCCCccccccccCCCcccccccC--CCCEEEEEEe-CCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 17 IFHGRDFCTKQEWMNTTEPLSLNSHL--KNKIVIMDFF-TYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 17 ~~~ap~~~~~~~~~~~g~~~~l~~~~--~gk~vvv~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
+-+||+|+... .+ |+++++ +++ +||+|||.|| ++||++|+.++|.+++++++|+++++.++++.
T Consensus 8 G~~aPdF~l~~--~~-G~~v~L-sd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is 74 (164)
T 4gqc_A 8 GEKAPDFTLPN--QD-FEPVNL-YEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAIS 74 (164)
T ss_dssp TSBCCCCEEEB--TT-SCEEEH-HHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEE
T ss_pred CCCCcCcEeEC--CC-CCEEEH-HHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEec
Confidence 44789997543 23 889999 787 8999999998 99999999999999999999999999888764
No 80
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.39 E-value=3.4e-13 Score=89.61 Aligned_cols=66 Identities=14% Similarity=0.073 Sum_probs=54.6
Q ss_pred cccccccCCCCccccccccCCCcccccccCCCCEEEEEEe-CCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 13 PLVAIFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFF-TYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 13 p~~~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
++..+-.+|+|.... .+ |+++++ ++++||+|||+|| ++||++|+.++|.|++++++| +++.++++.
T Consensus 51 ~l~~G~~aPdf~l~d--~~-G~~v~L-~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is 117 (200)
T 3zrd_A 51 LPQIGDKAKDFTLVA--KD-LSDVAL-SSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCIS 117 (200)
T ss_dssp CCCTTCBCCCCEEEC--TT-SCEEEG-GGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEE
T ss_pred cCCCCCCCCCeEEEC--CC-CCEEcH-HHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEE
Confidence 444556788887433 23 889999 8999999999999 789999999999999999999 577777654
No 81
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.39 E-value=3.6e-13 Score=86.47 Aligned_cols=65 Identities=6% Similarity=-0.109 Sum_probs=53.1
Q ss_pred ccccccCCCCccccccccCCCcccccccCCCCEEEEEEe-CCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 14 LVAIFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFF-TYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 14 ~~~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
+..+-.+|+|.... .+ |+++++ ++++||++||+|| ++||++|+.++|.++++++++ +++.++++.
T Consensus 21 l~~g~~~P~f~l~~--~~-G~~~~l-~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is 86 (171)
T 2yzh_A 21 LKVGDRAPEAVVVT--KD-LQEKIV-GGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVS 86 (171)
T ss_dssp CCTTSBCCCEEEEE--TT-SCEEEE-SSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEE
T ss_pred CCCCCcCCceEEEC--CC-CCEeeH-HHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEe
Confidence 33445788887432 23 889999 8999999999999 899999999999999999999 577777653
No 82
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.39 E-value=2.4e-13 Score=91.82 Aligned_cols=67 Identities=13% Similarity=0.068 Sum_probs=55.3
Q ss_pred cccccCCCCccccccccCCC--ccccccc-CCCCEEEEEEe-CCCChhhh-hhccHHHHHHHHhCcCCe-EEEEEE
Q psy6924 15 VAIFHGRDFCTKQEWMNTTE--PLSLNSH-LKNKIVIMDFF-TYCCINCM-HILPIPILIRHILEYKRT-HIIKTF 84 (89)
Q Consensus 15 ~~~~~ap~~~~~~~~~~~g~--~~~l~~~-~~gk~vvv~Fw-a~wC~~C~-~~~p~l~~l~~~~~~~~~-~vi~~~ 84 (89)
..+-.+|+|.... +..|+ ++++ ++ ++||+|||+|| ++||++|+ .++|.|++++++|+++++ .++++.
T Consensus 4 ~~G~~aP~f~l~~--~~~g~~~~v~l-~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is 76 (241)
T 1nm3_A 4 MEGKKVPQVTFRT--RQGDKWVDVTT-SELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVS 76 (241)
T ss_dssp CTTSBCCCCEEEE--EETTEEEEEEH-HHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCCCCCCeEEEc--ccCCCceeecH-HHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE
Confidence 3445788887432 22255 8999 78 89999999999 99999999 999999999999998888 888764
No 83
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.38 E-value=4.3e-13 Score=86.61 Aligned_cols=62 Identities=19% Similarity=0.150 Sum_probs=51.2
Q ss_pred ccCC-CCccccccccCCCcccccccCCCCEEEEEEeCCCCh-hhhhhccHHHHHHHHhCc--CCeEEEEE
Q psy6924 18 FHGR-DFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCI-NCMHILPIPILIRHILEY--KRTHIIKT 83 (89)
Q Consensus 18 ~~ap-~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~-~C~~~~p~l~~l~~~~~~--~~~~vi~~ 83 (89)
-.+| +|+... .+ |+++++ ++++||++||+||++||+ .|..+++.|+++++++++ .++.++++
T Consensus 5 ~~~P~~f~l~d--~~-G~~v~l-~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~i 70 (170)
T 3me7_A 5 TYVPGDITLVD--SY-GNEFQL-KNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITF 70 (170)
T ss_dssp CBCCTTCEEEE--TT-CCEEEG-GGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEE
T ss_pred CcCCCCeEEEc--CC-cCEEch-HHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEE
Confidence 3677 776433 23 899999 899999999999999997 699999999999999975 45777754
No 84
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.38 E-value=3.5e-13 Score=88.22 Aligned_cols=67 Identities=13% Similarity=0.023 Sum_probs=53.5
Q ss_pred cccccccCCCCccccccccCCCccccccc-CCCCEEEEE-EeCCCChhhh-hhccHHHHHHHHhCcCCeEEEE
Q psy6924 13 PLVAIFHGRDFCTKQEWMNTTEPLSLNSH-LKNKIVIMD-FFTYCCINCM-HILPIPILIRHILEYKRTHIIK 82 (89)
Q Consensus 13 p~~~~~~ap~~~~~~~~~~~g~~~~l~~~-~~gk~vvv~-Fwa~wC~~C~-~~~p~l~~l~~~~~~~~~~vi~ 82 (89)
|+..+-++|+|+... ..+ |+.+++ ++ ++||+|||. ||++||++|+ .++|.+++++++|+++++.+|+
T Consensus 14 ~~~vG~~aPdf~l~~-~~~-g~~v~L-~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~ 83 (173)
T 3mng_A 14 PIKVGDAIPAVEVFE-GEP-GNKVNL-AELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVA 83 (173)
T ss_dssp CCCTTCBCCCCEEEC-SST-TCEEEH-HHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEE
T ss_pred CCCCCCCCCCeEeee-CCC-CCEEEh-HHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEE
Confidence 344556899997541 123 889999 78 699966554 5699999999 5999999999999999998887
No 85
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.38 E-value=2.2e-13 Score=89.99 Aligned_cols=69 Identities=13% Similarity=0.015 Sum_probs=54.0
Q ss_pred ccccccCCCCccccccccCC-Cccccccc-CCCCEE-EEEEeCCCChhhhh-hccHHHHHHHHhCcCCeE-EEEEE
Q psy6924 14 LVAIFHGRDFCTKQEWMNTT-EPLSLNSH-LKNKIV-IMDFFTYCCINCMH-ILPIPILIRHILEYKRTH-IIKTF 84 (89)
Q Consensus 14 ~~~~~~ap~~~~~~~~~~~g-~~~~l~~~-~~gk~v-vv~Fwa~wC~~C~~-~~p~l~~l~~~~~~~~~~-vi~~~ 84 (89)
+..+-.+|+|+.... .+.| +.+++ ++ ++||+| |+.||++||++|+. ++|.+++++++|+++++. |+++.
T Consensus 26 l~vG~~aPdf~l~~~-~~~G~~~v~L-~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is 99 (184)
T 3uma_A 26 IAVGDKLPNATFKEK-TADGPVEVTT-ELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVA 99 (184)
T ss_dssp CCTTCBCCCCEEEEE-ETTEEEEEEH-HHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEE
T ss_pred CCCCCCCCCcEeecc-cCCCceEEeH-HHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEE
Confidence 455668999974331 1237 89999 78 899955 55567999999999 799999999999999988 77664
No 86
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.37 E-value=2.6e-13 Score=93.61 Aligned_cols=67 Identities=9% Similarity=0.018 Sum_probs=56.1
Q ss_pred ccccCCCCcccccccc-CCCcccccccCCCCEEEEEEe-CCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 16 AIFHGRDFCTKQEWMN-TTEPLSLNSHLKNKIVIMDFF-TYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 16 ~~~~ap~~~~~~~~~~-~g~~~~l~~~~~gk~vvv~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
.+-.+|+|.... +.+ .|+++++ ++++||+|||+|| ++||++|..++|.|++++++|+++++.||++.
T Consensus 64 vG~~aPdF~l~~-l~d~~G~~vsL-sd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS 132 (254)
T 3tjj_A 64 ISKPAPYWEGTA-VIDGEFKELKL-TDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACS 132 (254)
T ss_dssp TTSBCCCCEEEE-EETTEEEEEEG-GGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEE
T ss_pred CCCCCCCcEeee-ecCCCCcEEeH-HHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEc
Confidence 455789987432 222 2679999 8999999999999 99999999999999999999999998888764
No 87
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.37 E-value=7.7e-13 Score=82.77 Aligned_cols=61 Identities=13% Similarity=0.135 Sum_probs=49.2
Q ss_pred ccccccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEE
Q psy6924 14 LVAIFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIK 82 (89)
Q Consensus 14 ~~~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~ 82 (89)
+..+-.+|+|.... .+ |+.+++ ++++ |++||+||++||++|+.+.|.++++++++ ++.++.
T Consensus 5 l~~g~~~p~f~l~~--~~-g~~~~l-~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~---~v~~v~ 65 (154)
T 3ia1_A 5 VKPGEPLPDFLLLD--PK-GQPVTP-ATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET---GVPFYV 65 (154)
T ss_dssp CCSBEECCCCCEEC--TT-SCEECT-TTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH---CCCEEE
T ss_pred CCCCCcCCceEEEC--CC-CCEech-HHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc---CCeEEE
Confidence 34455788887433 23 889999 7888 99999999999999999999999999999 444443
No 88
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.07 E-value=4.7e-14 Score=87.11 Aligned_cols=49 Identities=24% Similarity=0.233 Sum_probs=42.5
Q ss_pred CCccccccc-CCCC-EEEEEEeCCCChhhhhhccHHHHHHHHhCc--CCeEEEE
Q psy6924 33 TEPLSLNSH-LKNK-IVIMDFFTYCCINCMHILPIPILIRHILEY--KRTHIIK 82 (89)
Q Consensus 33 g~~~~l~~~-~~gk-~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~--~~~~vi~ 82 (89)
|+.+++ ++ ++|| +++|+||++||++|+.++|.++++++++++ .++.++.
T Consensus 14 g~~~~l-~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~ 66 (143)
T 2lus_A 14 RCEVNA-NEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIF 66 (143)
Confidence 889999 78 8999 999999999999999999999999999953 3555554
No 89
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.37 E-value=3.8e-13 Score=87.18 Aligned_cols=62 Identities=15% Similarity=0.311 Sum_probs=50.7
Q ss_pred cccCCCCccccccccCCCcccccccCCCCEEEEEEeCCCCh-hhhhhccHHHHHHHHhCcCC--eEEEE
Q psy6924 17 IFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCI-NCMHILPIPILIRHILEYKR--THIIK 82 (89)
Q Consensus 17 ~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~-~C~~~~p~l~~l~~~~~~~~--~~vi~ 82 (89)
..++|+|+.... + |+++++ ++++||+|||+||.+||+ +|..+++.|.++++++++++ +.+|.
T Consensus 9 ~~~~PdF~L~d~--~-G~~v~l-~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~ 73 (170)
T 4hde_A 9 NWDLETFQFTNQ--D-GKPFGT-KDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVS 73 (170)
T ss_dssp CBCCCCCEEECT--T-SCEEEH-HHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCcCCCcEEECC--C-CCEEeH-HHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEe
Confidence 457899975432 3 899999 899999999999999997 79999999999998886544 55554
No 90
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.36 E-value=9.3e-13 Score=86.05 Aligned_cols=34 Identities=12% Similarity=0.164 Sum_probs=32.0
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcC
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYK 76 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~ 76 (89)
.+++|||+|||+||+||+++.|.|++++++++++
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~ 73 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKNF 73 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccCC
Confidence 5789999999999999999999999999999764
No 91
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.36 E-value=1e-12 Score=84.96 Aligned_cols=64 Identities=9% Similarity=0.030 Sum_probs=51.7
Q ss_pred cccccccCCCCccccccccCCCcccccccCCCCEEEEEEeCCC-ChhhhhhccHHHHHHHHhCcCCeEEEEE
Q psy6924 13 PLVAIFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYC-CINCMHILPIPILIRHILEYKRTHIIKT 83 (89)
Q Consensus 13 p~~~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~w-C~~C~~~~p~l~~l~~~~~~~~~~vi~~ 83 (89)
++..+-.+|+|.... .+ |+.+++ ++++||++||+||++| |++|+.++|.|++++++ +++.+|++
T Consensus 17 ~l~~G~~~P~f~l~~--~~-G~~v~l-~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~~v~vv~I 81 (175)
T 1xvq_A 17 LPAVGSPAPAFTLTG--GD-LGVISS-DQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA---SGATVLCV 81 (175)
T ss_dssp CCCTTSBCCCCEEEC--TT-SCEEEG-GGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH---TTCEEEEE
T ss_pred CCCcCCcCCCeEEEC--CC-CCEEeH-HHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh---cCCEEEEE
Confidence 344455788887433 23 889999 8999999999999999 99999999999999988 45666654
No 92
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.36 E-value=3.6e-13 Score=87.43 Aligned_cols=65 Identities=12% Similarity=0.114 Sum_probs=51.1
Q ss_pred cCCCCccccccc-cCC-----CcccccccC-CCC-EEEEEEeCCCChhhhhh-ccHHHHHHHHhCcCCeE-EEEEE
Q psy6924 19 HGRDFCTKQEWM-NTT-----EPLSLNSHL-KNK-IVIMDFFTYCCINCMHI-LPIPILIRHILEYKRTH-IIKTF 84 (89)
Q Consensus 19 ~ap~~~~~~~~~-~~g-----~~~~l~~~~-~gk-~vvv~Fwa~wC~~C~~~-~p~l~~l~~~~~~~~~~-vi~~~ 84 (89)
.+|+|+...... ..| +.+++ +++ +|| +||+.||++||++|+.+ +|.|++++++|+++++. |+++.
T Consensus 12 ~aP~f~l~~~~~~~~G~~~~~~~v~l-~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is 86 (171)
T 2pwj_A 12 AASNVSLQKARTWDEGVESKFSTTPV-NDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVA 86 (171)
T ss_dssp CSSSBCCCSCEECCCSSCTTCCCEEH-HHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEE
T ss_pred cCCCeEEecccccccCCccCcceEEH-HHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 678876432100 125 78999 785 996 77889999999999999 99999999999988888 87664
No 93
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.35 E-value=5.3e-13 Score=87.15 Aligned_cols=36 Identities=8% Similarity=0.146 Sum_probs=33.0
Q ss_pred ccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 40 SHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 40 ~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
++++|++++|+|||+|||+|+++.|.|+++++++++
T Consensus 50 ~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~~ 85 (167)
T 1z6n_A 50 QRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQPN 85 (167)
T ss_dssp HTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCTT
T ss_pred HHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCCC
Confidence 467899999999999999999999999999998863
No 94
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.35 E-value=2.5e-12 Score=79.06 Aligned_cols=47 Identities=15% Similarity=0.305 Sum_probs=39.7
Q ss_pred CCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 33 TEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 33 g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
++.++. ...+||+++|+||++||++|+++.|.++++++++++ ++.++
T Consensus 32 ~~~~~~-~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~v~~~ 78 (128)
T 3ul3_B 32 SNIING-VNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK-RIYLL 78 (128)
T ss_dssp CSSSSB-TTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GEEEE
T ss_pred ccHHHH-HHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEE
Confidence 455666 567999999999999999999999999999999985 34444
No 95
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.35 E-value=6.5e-13 Score=85.02 Aligned_cols=65 Identities=8% Similarity=-0.029 Sum_probs=52.9
Q ss_pred cccccccCCCCccccccccCCCcccccccCCCCEEEEEEe-CCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 13 PLVAIFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFF-TYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 13 p~~~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
++..+-.+|+|.... .+ |+++++ ++++||+++|+|| ++||++|+.++|.|++++++ +++.++++.
T Consensus 19 ~l~~G~~aP~f~l~~--~~-G~~~~l-~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~is 84 (166)
T 3p7x_A 19 QINEGDFAPDFTVLD--ND-LNQVTL-ADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLTIS 84 (166)
T ss_dssp CCCTTSBCCCCEEEC--TT-SCEEEG-GGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEEEE
T ss_pred cCCCCCCCCCeEEEc--CC-CCEEeH-HHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEEEE
Confidence 444556789997543 23 889999 8999999999999 78999999999999999877 567777654
No 96
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.34 E-value=1.3e-12 Score=83.04 Aligned_cols=62 Identities=10% Similarity=0.042 Sum_probs=47.0
Q ss_pred ccccCCCCccccccccCCCccccccc-CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEE
Q psy6924 16 AIFHGRDFCTKQEWMNTTEPLSLNSH-LKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKT 83 (89)
Q Consensus 16 ~~~~ap~~~~~~~~~~~g~~~~l~~~-~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~ 83 (89)
.+-.+|+|..... .+.|+.+++ .. .+||++||+||++||++|+.+.|.+++++++ ++.++++
T Consensus 24 ~G~~~P~f~l~~~-~~~g~~~~~-~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~v 86 (168)
T 2b1k_A 24 IGKPVPKFRLESL-DNPGQFYQA-DVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ----GIRVVGM 86 (168)
T ss_dssp TTSBCCCCEEEES-SSTTCEEEG-GGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCCEEEE
T ss_pred cCCcCCCeEeecc-cCCCcEeeh-hHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEE
Confidence 3456888874322 123778887 56 4999999999999999999999999999876 4555544
No 97
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.34 E-value=7.8e-13 Score=80.08 Aligned_cols=36 Identities=25% Similarity=0.463 Sum_probs=32.8
Q ss_pred ccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 40 SHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 40 ~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
++.++|+|+|+|||+||++|+.+.|.++++++++++
T Consensus 16 ~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~ 51 (105)
T 3zzx_A 16 NEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD 51 (105)
T ss_dssp HHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT
T ss_pred HhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC
Confidence 345789999999999999999999999999999975
No 98
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.32 E-value=2.6e-12 Score=79.69 Aligned_cols=47 Identities=23% Similarity=0.302 Sum_probs=40.0
Q ss_pred CCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 33 TEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 33 g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
+...++ +..+|++++|+||++||++|+.+.|.+++++++++++ +.++
T Consensus 41 ~~~~~l-~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~ 87 (141)
T 3hxs_A 41 NHSKEW-KYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGK-IYIY 87 (141)
T ss_dssp SCCCCC-CCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEE
T ss_pred cchhHH-HHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCc-eEEE
Confidence 456666 6778999999999999999999999999999999864 4443
No 99
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.29 E-value=2.7e-12 Score=81.66 Aligned_cols=35 Identities=14% Similarity=0.078 Sum_probs=32.5
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcC
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILEYK 76 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~ 76 (89)
.++++|||+|||+||++|+++.|.+++++++++++
T Consensus 21 ~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~ 55 (149)
T 3gix_A 21 TAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM 55 (149)
T ss_dssp CCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc
Confidence 46899999999999999999999999999999775
No 100
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.28 E-value=4.2e-12 Score=79.22 Aligned_cols=60 Identities=13% Similarity=0.249 Sum_probs=46.2
Q ss_pred cccCCCCccccccccCC--------CcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEE
Q psy6924 17 IFHGRDFCTKQEWMNTT--------EPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKT 83 (89)
Q Consensus 17 ~~~ap~~~~~~~~~~~g--------~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~ 83 (89)
+-.+|+|.... ++ | +.+++ ++++||+++|+||++||++|+.+.|.+++++++ .++.++.+
T Consensus 11 g~~~p~f~l~~--~~-g~~~~~~~~~~~~l-~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~---~~v~~v~v 78 (156)
T 1kng_A 11 GRPAPQTALPP--LE-GLQADNVQVPGLDP-AAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD---KRFQLVGI 78 (156)
T ss_dssp -CBCCCCCBCC--CT-TCEETTEECCCBCG-GGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC---TTSEEEEE
T ss_pred CCCCCCceeee--cc-CcccccccCceech-HHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc---CCeEEEEE
Confidence 34677776322 23 4 88999 789999999999999999999999999999776 33555544
No 101
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.24 E-value=1.3e-11 Score=77.95 Aligned_cols=38 Identities=16% Similarity=0.217 Sum_probs=33.5
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
.+++|+|+|||+||++|+.+.|.+++++++++++ +.++
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~ 59 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIY 59 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC-eEEE
Confidence 5899999999999999999999999999999764 4443
No 102
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.24 E-value=1.8e-11 Score=73.83 Aligned_cols=43 Identities=14% Similarity=0.214 Sum_probs=35.6
Q ss_pred CCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 33 TEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 33 g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
++.+......++++++|+||++||++|+++.|.++++++++++
T Consensus 14 ~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~ 56 (121)
T 2djj_A 14 AKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAK 56 (121)
T ss_dssp TTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTT
T ss_pred ccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhh
Confidence 4444431134789999999999999999999999999999986
No 103
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.22 E-value=9e-12 Score=75.56 Aligned_cols=34 Identities=21% Similarity=0.258 Sum_probs=32.1
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
.++++++|+||++||++|+++.|.++++++++++
T Consensus 29 ~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~ 62 (116)
T 3qfa_C 29 AGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN 62 (116)
T ss_dssp HTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC
Confidence 4799999999999999999999999999999976
No 104
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.21 E-value=2.2e-11 Score=76.29 Aligned_cols=47 Identities=19% Similarity=0.248 Sum_probs=37.6
Q ss_pred CCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 33 TEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 33 g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
++.+.. ...++++++|+||++||++|+++.|.+++++++++++ +.++
T Consensus 45 ~~~~~~-~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~-~~~~ 91 (148)
T 3p2a_A 45 AETLDK-LLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGK-VRFV 91 (148)
T ss_dssp TTTHHH-HTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT-CEEE
T ss_pred HHHHHH-HHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCc-eEEE
Confidence 344443 2357899999999999999999999999999999765 4444
No 105
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.21 E-value=8.5e-12 Score=84.16 Aligned_cols=66 Identities=9% Similarity=-0.069 Sum_probs=52.8
Q ss_pred ccccCCCCccccccccCCCcccccccCCCC--EEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 16 AIFHGRDFCTKQEWMNTTEPLSLNSHLKNK--IVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 16 ~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk--~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
.+-.+|+|+.... ...| ++++ ++++|| +||+.||++||+.|..+++.|++++++|+++++.+|++.
T Consensus 5 iG~~aP~F~l~~~-~~~G-~v~l-~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS 72 (220)
T 1xcc_A 5 LGATFPNFTAKAS-GIDG-DFEL-YKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFS 72 (220)
T ss_dssp TTCBCCCCEECBT-TCSS-CEEH-HHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEE
T ss_pred CCCCCCCcEeecc-cCCC-cEeH-HHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 3457888874332 1136 8999 899998 566667999999999999999999999999898888764
No 106
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.21 E-value=7.4e-12 Score=85.44 Aligned_cols=64 Identities=8% Similarity=-0.127 Sum_probs=54.3
Q ss_pred ccccCCCCccccccccCCCcccccccCCCC-EEEEEEe-CCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 16 AIFHGRDFCTKQEWMNTTEPLSLNSHLKNK-IVIMDFF-TYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 16 ~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk-~vvv~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
.+-.+|+|+.... + | .+++ ++++|+ ++||.|| ++||+.|..+++.|++++++|+++++.+|++.
T Consensus 5 iG~~aPdF~l~~~--~-G-~v~l-~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS 70 (233)
T 2v2g_A 5 LGEVFPNFEADST--I-G-KLKF-HDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALS 70 (233)
T ss_dssp TTCBCCCCEEEET--T-C-CEEH-HHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEE
T ss_pred CCCCCCCcEEecC--C-C-CEEH-HHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEc
Confidence 4457899874432 3 6 8999 899888 9999998 99999999999999999999999898888764
No 107
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.21 E-value=7.5e-12 Score=84.66 Aligned_cols=65 Identities=6% Similarity=-0.007 Sum_probs=53.3
Q ss_pred cccccCCCCccccccccCCCcccccccCCCC--EEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 15 VAIFHGRDFCTKQEWMNTTEPLSLNSHLKNK--IVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 15 ~~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk--~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
..+-.+|+|+.... + | ++++ ++++|+ +||+.||++||+.|..+++.|++++++|+++++.+|++.
T Consensus 6 ~~G~~aP~F~l~~~--~-G-~v~l-~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS 72 (224)
T 1prx_A 6 LLGDVAPNFEANTT--V-G-RIRF-HDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALS 72 (224)
T ss_dssp CTTCBCCCCEEEET--T-E-EEEH-HHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred CCcCCCCCcEEecC--C-C-CEEH-HHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEc
Confidence 34457899874432 3 6 8999 888887 677777999999999999999999999999998888764
No 108
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.21 E-value=1.7e-11 Score=74.71 Aligned_cols=42 Identities=17% Similarity=0.154 Sum_probs=36.1
Q ss_pred ccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEE
Q psy6924 40 SHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIK 82 (89)
Q Consensus 40 ~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~ 82 (89)
...+|++++|+||++||++|+++.|.+++++++++ .++.++.
T Consensus 22 ~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~ 63 (126)
T 2l57_A 22 EAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE-GKFNIYY 63 (126)
T ss_dssp TCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS-SSCEEEE
T ss_pred HHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc-CCeEEEE
Confidence 45689999999999999999999999999999997 3455554
No 109
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.20 E-value=9.9e-12 Score=77.13 Aligned_cols=42 Identities=19% Similarity=0.214 Sum_probs=36.3
Q ss_pred cCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEE
Q psy6924 41 HLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIK 82 (89)
Q Consensus 41 ~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~ 82 (89)
+.++++++|+|||+||++|+++.|.++++++++++.++.++.
T Consensus 23 ~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~ 64 (137)
T 2dj0_A 23 RDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGK 64 (137)
T ss_dssp HSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEE
T ss_pred cCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 446779999999999999999999999999999875665553
No 110
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.20 E-value=2.1e-11 Score=72.31 Aligned_cols=33 Identities=15% Similarity=0.135 Sum_probs=31.0
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhC
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILE 74 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~ 74 (89)
.++++++|+|||+||++|+++.|.+++++++++
T Consensus 16 ~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~ 48 (105)
T 4euy_A 16 EEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN 48 (105)
T ss_dssp TCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT
T ss_pred hcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC
Confidence 378999999999999999999999999999985
No 111
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.19 E-value=2e-11 Score=73.13 Aligned_cols=34 Identities=24% Similarity=0.477 Sum_probs=32.0
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
.++|+++|+||++||++|+++.|.++++++++++
T Consensus 22 ~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~ 55 (109)
T 3f3q_A 22 AQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ 55 (109)
T ss_dssp TSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT
T ss_pred hcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC
Confidence 4699999999999999999999999999999976
No 112
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.19 E-value=5.2e-12 Score=78.37 Aligned_cols=44 Identities=20% Similarity=0.392 Sum_probs=36.4
Q ss_pred cccccccCCCCEEEEEEeCCCChhhhhhccHH---HHHHHHhCcCCeEEE
Q psy6924 35 PLSLNSHLKNKIVIMDFFTYCCINCMHILPIP---ILIRHILEYKRTHII 81 (89)
Q Consensus 35 ~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l---~~l~~~~~~~~~~vi 81 (89)
...+ ++.+||++||+||++||++|+++.|.+ .++++++++ +.++
T Consensus 23 ~~~l-~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~--~~~~ 69 (134)
T 2fwh_A 23 NQAL-VEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD--TVLL 69 (134)
T ss_dssp HHHH-HHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT--SEEE
T ss_pred HHHH-HHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC--cEEE
Confidence 4445 566799999999999999999999999 999999874 5444
No 113
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.18 E-value=6.5e-11 Score=72.50 Aligned_cols=39 Identities=21% Similarity=0.373 Sum_probs=34.1
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcC-CeEEE
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYK-RTHII 81 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~-~~~vi 81 (89)
.+++++|+||++||++|+++.|.+++++++++++ .+.++
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~ 63 (133)
T 2dj3_A 24 PKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIA 63 (133)
T ss_dssp TTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEE
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 5899999999999999999999999999999864 34444
No 114
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.18 E-value=3.6e-12 Score=81.74 Aligned_cols=47 Identities=23% Similarity=0.417 Sum_probs=31.7
Q ss_pred cccccccCCCCEEEEEEeCCCChhhhhhccHH---HHHHHHhCcCCeEEEEE
Q psy6924 35 PLSLNSHLKNKIVIMDFFTYCCINCMHILPIP---ILIRHILEYKRTHIIKT 83 (89)
Q Consensus 35 ~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l---~~l~~~~~~~~~~vi~~ 83 (89)
.+.+ +..+||+|+|+|||+||++|+++.+.+ .++.+.+++ +++++++
T Consensus 39 ~~~~-a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v 88 (172)
T 3f9u_A 39 GMEY-ARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITL 88 (172)
T ss_dssp HHHH-HHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEE
T ss_pred HHHH-HHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEE
Confidence 3444 456899999999999999999973333 444444443 4555543
No 115
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.18 E-value=2.4e-11 Score=75.23 Aligned_cols=33 Identities=12% Similarity=0.193 Sum_probs=30.7
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
++++|+|+|||+||++|+.+.|.+++++++|++
T Consensus 22 ~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~ 54 (118)
T 3evi_A 22 EDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE 54 (118)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT
T ss_pred CCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC
Confidence 456999999999999999999999999999975
No 116
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.18 E-value=2e-11 Score=83.68 Aligned_cols=41 Identities=15% Similarity=0.225 Sum_probs=35.4
Q ss_pred cCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEE
Q psy6924 41 HLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIK 82 (89)
Q Consensus 41 ~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~ 82 (89)
..++++|+|+||++||++|+.+.|.+++++++++++ +.+++
T Consensus 23 ~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~ 63 (287)
T 3qou_A 23 QSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQ-FILAK 63 (287)
T ss_dssp TTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSS-SEEEE
T ss_pred hcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCC-eEEEE
Confidence 346999999999999999999999999999999864 44443
No 117
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.17 E-value=2.1e-11 Score=72.74 Aligned_cols=41 Identities=12% Similarity=0.194 Sum_probs=32.6
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEE
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIK 82 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~ 82 (89)
.++++++|+||++||++|+++.|.+++++++++..++.++.
T Consensus 19 ~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~ 59 (112)
T 3d6i_A 19 AGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLS 59 (112)
T ss_dssp TTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEE
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 35899999999999999999999999999996544555543
No 118
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.17 E-value=3.6e-11 Score=71.69 Aligned_cols=35 Identities=20% Similarity=0.186 Sum_probs=32.2
Q ss_pred cCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 41 HLKNKIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 41 ~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
+.++++++|+||++||++|+++.|.++++++++++
T Consensus 21 ~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~ 55 (111)
T 2pu9_C 21 AAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD 55 (111)
T ss_dssp TCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT
T ss_pred hcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC
Confidence 34789999999999999999999999999999975
No 119
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.16 E-value=3.2e-11 Score=77.01 Aligned_cols=38 Identities=16% Similarity=0.304 Sum_probs=34.0
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
.++++||+||++||++|+.+.|.+++++++++++ +.++
T Consensus 63 ~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~ 100 (155)
T 2ppt_A 63 DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQ-VRLA 100 (155)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-CEEE
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCC-EEEE
Confidence 6899999999999999999999999999999864 4444
No 120
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.15 E-value=6.5e-11 Score=69.43 Aligned_cols=39 Identities=23% Similarity=0.446 Sum_probs=34.6
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
.++++++|+||++||++|+.+.|.+++++++++++ +.++
T Consensus 17 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~ 55 (106)
T 3die_A 17 VESGVQLVDFWATACGPCKMIAPVLEELAADYEGK-ADIL 55 (106)
T ss_dssp SCSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT-CEEE
T ss_pred hcCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-cEEE
Confidence 38999999999999999999999999999999875 4443
No 121
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.14 E-value=4.2e-11 Score=81.42 Aligned_cols=66 Identities=12% Similarity=0.084 Sum_probs=56.6
Q ss_pred cccCCCCcccccccc-CCCcccccccCCCCEEEEEEe-CCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 17 IFHGRDFCTKQEWMN-TTEPLSLNSHLKNKIVIMDFF-TYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 17 ~~~ap~~~~~~~~~~-~g~~~~l~~~~~gk~vvv~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
+-+||+|+.... .+ .++.++| ++++||+|||.|| +.||+.|..+++.+++.+++|++.+.++|++.
T Consensus 26 G~~APdF~l~a~-~d~~~~~vsL-sd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS 93 (216)
T 3sbc_A 26 QKQAPTFKKTAV-VDGVFDEVSL-DKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFAS 93 (216)
T ss_dssp TSBCCCCCEEEE-ETTEEEEECG-GGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred CCcCCCCCCcce-ECCCCcEEeh-HHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEee
Confidence 446999984322 22 2568999 8999999999999 99999999999999999999999999999875
No 122
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.14 E-value=6.5e-11 Score=72.42 Aligned_cols=32 Identities=6% Similarity=-0.031 Sum_probs=30.0
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhC
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILE 74 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~ 74 (89)
.+++++|+|||+||++|+++.|.++++++++.
T Consensus 32 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~ 63 (127)
T 3h79_A 32 PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQS 63 (127)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCccHHHHHHhHHHHHHHHHHH
Confidence 58999999999999999999999999998764
No 123
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.13 E-value=5.8e-11 Score=73.27 Aligned_cols=48 Identities=15% Similarity=0.252 Sum_probs=37.9
Q ss_pred CCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCC--eEEE
Q psy6924 33 TEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKR--THII 81 (89)
Q Consensus 33 g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~--~~vi 81 (89)
++.+.. .-.+++++||+||++||++|+++.|.++++++++++++ +.++
T Consensus 24 ~~~~~~-~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~ 73 (140)
T 2dj1_A 24 DGNFDN-FVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVA 73 (140)
T ss_dssp TTTHHH-HHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEE
T ss_pred hHhHHH-HHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEE
Confidence 444443 23468999999999999999999999999999998753 4444
No 124
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.12 E-value=7.1e-11 Score=69.98 Aligned_cols=33 Identities=15% Similarity=0.341 Sum_probs=31.0
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhC
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILE 74 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~ 74 (89)
.++++++|+||++||++|+++.|.+++++++++
T Consensus 19 ~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~ 51 (107)
T 1gh2_A 19 AGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP 51 (107)
T ss_dssp TTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT
T ss_pred CCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC
Confidence 478999999999999999999999999999994
No 125
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.12 E-value=8.6e-11 Score=70.45 Aligned_cols=38 Identities=21% Similarity=0.346 Sum_probs=33.9
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
++++++|+||++||++|+++.|.+++++++++++ +.++
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~-v~~~ 53 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDK-LKIV 53 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTT-CEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC-cEEE
Confidence 8899999999999999999999999999999863 4444
No 126
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.12 E-value=4e-11 Score=74.78 Aligned_cols=33 Identities=9% Similarity=0.188 Sum_probs=30.7
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
+|++|||+|||+||++|+.+.|.+++++++|++
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~~ 61 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKFPE 61 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHCSS
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC
Confidence 568999999999999999999999999999863
No 127
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.12 E-value=1.5e-10 Score=68.34 Aligned_cols=39 Identities=23% Similarity=0.348 Sum_probs=33.9
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
..+++++|+||++||++|+.+.|.+++++++++++ +.++
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~ 56 (108)
T 2trx_A 18 KADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVA 56 (108)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEE
T ss_pred hcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCC-cEEE
Confidence 36899999999999999999999999999999764 4443
No 128
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.12 E-value=7.9e-11 Score=69.09 Aligned_cols=35 Identities=23% Similarity=0.352 Sum_probs=32.5
Q ss_pred cCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 41 HLKNKIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 41 ~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
+.++++++|+||++||++|+++.|.++++++++++
T Consensus 17 ~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~ 51 (105)
T 3m9j_A 17 AAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN 51 (105)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT
T ss_pred hcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC
Confidence 34799999999999999999999999999999976
No 129
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.12 E-value=9.1e-11 Score=69.79 Aligned_cols=38 Identities=29% Similarity=0.440 Sum_probs=33.6
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
.+++++|+||++||++|+++.|.+++++++++++ +.++
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~ 59 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDK-IEIV 59 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEE
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCC-eEEE
Confidence 5899999999999999999999999999999764 4444
No 130
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.12 E-value=1.1e-10 Score=71.66 Aligned_cols=38 Identities=21% Similarity=0.363 Sum_probs=33.4
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
.++++++|+||++||++|+.+.|.+++++++++ ++.++
T Consensus 36 ~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~ 73 (124)
T 1xfl_A 36 ESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--NVLFL 73 (124)
T ss_dssp HTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--SEEEE
T ss_pred hcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEE
Confidence 369999999999999999999999999999987 34444
No 131
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.12 E-value=8.3e-11 Score=71.77 Aligned_cols=32 Identities=13% Similarity=0.350 Sum_probs=30.5
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhC
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILE 74 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~ 74 (89)
.+++++|+||++||++|+++.|.+++++++++
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~ 55 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVK 55 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHH
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHH
Confidence 57999999999999999999999999999987
No 132
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.11 E-value=2.9e-11 Score=75.13 Aligned_cols=34 Identities=18% Similarity=0.202 Sum_probs=30.1
Q ss_pred ccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHh
Q psy6924 40 SHLKNKIVIMDFFTYCCINCMHILPIPILIRHIL 73 (89)
Q Consensus 40 ~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~ 73 (89)
++.+||+++|+|||+||++|+++.|.++++++++
T Consensus 36 ~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~ 69 (133)
T 3cxg_A 36 SSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY 69 (133)
T ss_dssp TC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE
T ss_pred HhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc
Confidence 4557899999999999999999999999988776
No 133
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.11 E-value=9.6e-11 Score=68.83 Aligned_cols=39 Identities=18% Similarity=0.306 Sum_probs=34.0
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
..+++++|+||++||++|+++.|.+++++++++++ +.++
T Consensus 15 ~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~ 53 (105)
T 1nsw_A 15 QGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADK-VTVA 53 (105)
T ss_dssp SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTT-CEEE
T ss_pred hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-cEEE
Confidence 46799999999999999999999999999999864 4443
No 134
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.11 E-value=5.8e-11 Score=78.92 Aligned_cols=48 Identities=19% Similarity=0.313 Sum_probs=38.8
Q ss_pred CCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCC--eEEE
Q psy6924 33 TEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKR--THII 81 (89)
Q Consensus 33 g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~--~~vi 81 (89)
++.+.. ...++++++|+|||+||++|+++.|.++++++++++++ +.++
T Consensus 22 ~~~~~~-~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~ 71 (241)
T 3idv_A 22 DANFDN-FVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVA 71 (241)
T ss_dssp TTTHHH-HHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEE
T ss_pred ccCHHH-HHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEE
Confidence 444443 34579999999999999999999999999999998764 4444
No 135
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.11 E-value=1e-10 Score=70.68 Aligned_cols=38 Identities=16% Similarity=0.320 Sum_probs=33.5
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
.+++++|+||++||++|+++.|.++++++++++ ++.++
T Consensus 20 ~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~ 57 (122)
T 3aps_A 20 GKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAG 57 (122)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEE
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEE
Confidence 688999999999999999999999999999986 34444
No 136
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.10 E-value=8.6e-11 Score=71.26 Aligned_cols=35 Identities=23% Similarity=0.294 Sum_probs=32.4
Q ss_pred cCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 41 HLKNKIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 41 ~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
+.++++++|+||++||++|+++.|.++++++++++
T Consensus 34 ~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~ 68 (124)
T 1faa_A 34 AAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD 68 (124)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT
T ss_pred hcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC
Confidence 34799999999999999999999999999999975
No 137
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.10 E-value=9.3e-12 Score=80.16 Aligned_cols=48 Identities=13% Similarity=0.146 Sum_probs=37.0
Q ss_pred ccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhC
Q psy6924 26 KQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILE 74 (89)
Q Consensus 26 ~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~ 74 (89)
...|.+..+.+.. ...+||+|||+|||+||++|+.+.|.++++++.++
T Consensus 29 ~i~w~~~~~~~~~-~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~ 76 (164)
T 1sen_A 29 HIHWRTLEDGKKE-AAASGLPLMVIIHKSWCGACKALKPKFAESTEISE 76 (164)
T ss_dssp TSCBCCHHHHHHH-HHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHH
T ss_pred cccccCHHHHHHH-HHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhh
Confidence 3445332345555 55689999999999999999999999999876654
No 138
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.10 E-value=1.1e-10 Score=70.62 Aligned_cols=33 Identities=18% Similarity=0.398 Sum_probs=31.4
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
++++++|+||++||++|+++.|.++++++++++
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~ 61 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD 61 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC
Confidence 689999999999999999999999999999976
No 139
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.10 E-value=9.2e-11 Score=71.54 Aligned_cols=38 Identities=13% Similarity=0.273 Sum_probs=33.5
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
.+++++|+||++||++|+++.|.+++++++++++ +.++
T Consensus 34 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~ 71 (130)
T 2dml_A 34 SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDV-VKVG 71 (130)
T ss_dssp CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTT-SEEE
T ss_pred CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCc-eEEE
Confidence 5889999999999999999999999999999864 4443
No 140
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.10 E-value=1.1e-10 Score=69.32 Aligned_cols=38 Identities=21% Similarity=0.357 Sum_probs=33.6
Q ss_pred CCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEE
Q psy6924 44 NKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIK 82 (89)
Q Consensus 44 gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~ 82 (89)
+++++|+||++||++|+.+.|.++++++++++ ++.++.
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~ 61 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLK 61 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEE
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEE
Confidence 89999999999999999999999999999986 455443
No 141
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.10 E-value=1.7e-10 Score=71.45 Aligned_cols=38 Identities=24% Similarity=0.365 Sum_probs=33.5
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
.+++++|+||++||++|+++.|.+++++++++++ +.++
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~ 74 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQ-IVIY 74 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTT-CEEE
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-EEEE
Confidence 5789999999999999999999999999999864 4444
No 142
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.10 E-value=1.8e-10 Score=71.06 Aligned_cols=39 Identities=21% Similarity=0.255 Sum_probs=34.2
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
.++++++|+||++||++|+++.|.+++++++++++ +.++
T Consensus 38 ~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~ 76 (128)
T 2o8v_B 38 KADGAILVDFWAEWCGPAKMIAPILDEIADEYQGK-LTVA 76 (128)
T ss_dssp TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTT-EEEE
T ss_pred hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEE
Confidence 37899999999999999999999999999999864 4444
No 143
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.68 E-value=9.3e-12 Score=76.17 Aligned_cols=47 Identities=21% Similarity=0.453 Sum_probs=38.5
Q ss_pred ccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHH---HHHHHHhCc
Q psy6924 28 EWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIP---ILIRHILEY 75 (89)
Q Consensus 28 ~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l---~~l~~~~~~ 75 (89)
.|...++.+++ +..+||+++|+||++||++|+.+.|.+ +++.+.+++
T Consensus 4 ~w~~~~~~~~~-~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~ 53 (130)
T 2lst_A 4 RWYPYPEALAL-AQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA 53 (130)
Confidence 34443456676 677899999999999999999999999 888887765
No 144
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.09 E-value=1.5e-10 Score=68.25 Aligned_cols=38 Identities=24% Similarity=0.329 Sum_probs=33.6
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
.+++++|+||++||++|+++.|.+++++++++++ +.++
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~ 55 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDK-LKCV 55 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEE
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCc-eEEE
Confidence 5899999999999999999999999999999864 4444
No 145
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.09 E-value=1.2e-10 Score=70.26 Aligned_cols=33 Identities=21% Similarity=0.410 Sum_probs=31.4
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
++++++|+||++||++|+.+.|.++++++++++
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~ 65 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN 65 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC
Confidence 689999999999999999999999999999976
No 146
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.09 E-value=5.3e-11 Score=73.12 Aligned_cols=41 Identities=12% Similarity=0.186 Sum_probs=34.7
Q ss_pred cCCCCEEEEEEeCCCChhhhhhccHHH--HHHHHhCcCCeEEEE
Q psy6924 41 HLKNKIVIMDFFTYCCINCMHILPIPI--LIRHILEYKRTHIIK 82 (89)
Q Consensus 41 ~~~gk~vvv~Fwa~wC~~C~~~~p~l~--~l~~~~~~~~~~vi~ 82 (89)
..+||+|+|+||++||++|+.+.|.++ ++++++++ ++.++.
T Consensus 26 ~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~ 68 (133)
T 3fk8_A 26 KRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK-HFEVVK 68 (133)
T ss_dssp HHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEE
T ss_pred HhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEE
Confidence 357999999999999999999999999 99988865 355543
No 147
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.08 E-value=1.3e-10 Score=77.75 Aligned_cols=38 Identities=24% Similarity=0.376 Sum_probs=34.0
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
++++++|+||++||++|+.+.|.+++++++++++ +.++
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~ 66 (222)
T 3dxb_A 29 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVA 66 (222)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEE
T ss_pred cCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-cEEE
Confidence 6899999999999999999999999999999875 4443
No 148
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.08 E-value=1.3e-10 Score=70.20 Aligned_cols=33 Identities=9% Similarity=-0.033 Sum_probs=30.7
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
.+++++|+||++||++|+++.|.+++++++++.
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~ 60 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFAGTLSGVVAETKA 60 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC
Confidence 578999999999999999999999999998864
No 149
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.08 E-value=1.3e-10 Score=70.81 Aligned_cols=40 Identities=20% Similarity=0.280 Sum_probs=33.6
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEE
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIK 82 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~ 82 (89)
+++ .++|+||++||++|+++.|.++++++++++.++.++.
T Consensus 21 ~~~-~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~ 60 (126)
T 1x5e_A 21 LEG-DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAK 60 (126)
T ss_dssp TSS-EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred hCC-CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEE
Confidence 344 4899999999999999999999999999875565554
No 150
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.08 E-value=1.4e-10 Score=70.44 Aligned_cols=37 Identities=27% Similarity=0.403 Sum_probs=32.5
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
.+++++|+||++||++|+.+.|.++++++++ .++.++
T Consensus 22 ~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~ 58 (118)
T 2f51_A 22 APGLVLVDFFATWCGPCQRLGQILPSIAEAN--KDVTFI 58 (118)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCeEEE
Confidence 5899999999999999999999999999998 344444
No 151
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.08 E-value=1.6e-10 Score=68.31 Aligned_cols=39 Identities=18% Similarity=0.215 Sum_probs=33.9
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
.++++++|+||++||++|+++.|.+++++++++++ +.++
T Consensus 20 ~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~-v~~~ 58 (111)
T 3gnj_A 20 DEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEES-FGFY 58 (111)
T ss_dssp TSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT-SEEE
T ss_pred hcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCc-eEEE
Confidence 36799999999999999999999999999999863 4443
No 152
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.07 E-value=1.9e-10 Score=77.59 Aligned_cols=39 Identities=13% Similarity=0.258 Sum_probs=34.0
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc--CCeEEE
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEY--KRTHII 81 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~--~~~~vi 81 (89)
.+++++|+|||+||++|+++.|.++++++++++ ..+.++
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~ 69 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLA 69 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEE
T ss_pred CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEE
Confidence 569999999999999999999999999999987 344444
No 153
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.07 E-value=2.4e-10 Score=67.17 Aligned_cols=35 Identities=26% Similarity=0.389 Sum_probs=32.5
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcC
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILEYK 76 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~ 76 (89)
.++++++|+||++||++|+.+.|.+++++++++++
T Consensus 19 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~ 53 (109)
T 3tco_A 19 RNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGK 53 (109)
T ss_dssp HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT
T ss_pred hcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCC
Confidence 36899999999999999999999999999999864
No 154
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.06 E-value=3.1e-10 Score=66.58 Aligned_cols=39 Identities=21% Similarity=0.304 Sum_probs=34.0
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
..+++++|.||++||++|+.+.|.++++++++++ ++.++
T Consensus 18 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~ 56 (107)
T 2i4a_A 18 KASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-KVTVA 56 (107)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-SEEEE
T ss_pred hCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC-cEEEE
Confidence 3689999999999999999999999999999986 34444
No 155
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.06 E-value=2.1e-10 Score=69.46 Aligned_cols=38 Identities=18% Similarity=0.194 Sum_probs=33.6
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
.+++++|+||++||++|+++.|.+++++++++++ +.++
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~-v~~~ 67 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGK-VVMA 67 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTS-SEEE
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-eEEE
Confidence 6899999999999999999999999999998764 4444
No 156
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.05 E-value=3.6e-10 Score=66.17 Aligned_cols=39 Identities=23% Similarity=0.472 Sum_probs=33.9
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
.++++++|.||++||++|+++.|.++++++++++ ++.++
T Consensus 18 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~ 56 (106)
T 1xwb_A 18 ASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD-NVVVL 56 (106)
T ss_dssp HTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEE
T ss_pred cCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC-CeEEE
Confidence 4789999999999999999999999999999863 34444
No 157
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.05 E-value=2.2e-10 Score=71.41 Aligned_cols=38 Identities=16% Similarity=0.184 Sum_probs=33.9
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
.+++++|+||++||++|+++.|.+++++++++++ +.++
T Consensus 23 ~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~ 60 (140)
T 3hz4_A 23 SKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSS-AVFG 60 (140)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEE
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCc-eEEE
Confidence 5899999999999999999999999999999874 4444
No 158
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.05 E-value=2.4e-10 Score=67.83 Aligned_cols=39 Identities=15% Similarity=0.339 Sum_probs=34.3
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
..+++++|+||++||++|+.+.|.+++++++++++ +.++
T Consensus 23 ~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~ 61 (115)
T 1thx_A 23 KAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDR-LKVV 61 (115)
T ss_dssp TCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEE
T ss_pred cCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCc-EEEE
Confidence 37899999999999999999999999999999865 4444
No 159
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.05 E-value=2e-10 Score=67.79 Aligned_cols=34 Identities=15% Similarity=0.220 Sum_probs=31.1
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcC
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYK 76 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~ 76 (89)
++++++|+||++||++|+++.|.++++++++.+.
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~ 53 (111)
T 3uvt_A 20 AEGITFIKFYAPWCGHCKTLAPTWEELSKKEFPG 53 (111)
T ss_dssp HSSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC
T ss_pred cCCcEEEEEECCCChhHHHhhHHHHHHHHHhhcc
Confidence 4889999999999999999999999999887654
No 160
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.05 E-value=1.6e-10 Score=69.48 Aligned_cols=33 Identities=33% Similarity=0.587 Sum_probs=30.8
Q ss_pred cCCCCEEEEEEeCCCChhhhhhccHHHHHHHHh
Q psy6924 41 HLKNKIVIMDFFTYCCINCMHILPIPILIRHIL 73 (89)
Q Consensus 41 ~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~ 73 (89)
+.++++++|+||++||++|+++.|.++++++++
T Consensus 30 ~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~ 62 (117)
T 2xc2_A 30 QHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY 62 (117)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS
T ss_pred hCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc
Confidence 347999999999999999999999999999888
No 161
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.04 E-value=2.1e-11 Score=77.46 Aligned_cols=48 Identities=19% Similarity=0.313 Sum_probs=38.1
Q ss_pred CCcccccccCCCCEEEEEEe-CCCChhhhhhccHH---HHHHHHhCcCCeEEEE
Q psy6924 33 TEPLSLNSHLKNKIVIMDFF-TYCCINCMHILPIP---ILIRHILEYKRTHIIK 82 (89)
Q Consensus 33 g~~~~l~~~~~gk~vvv~Fw-a~wC~~C~~~~p~l---~~l~~~~~~~~~~vi~ 82 (89)
++.+++ +..+||+|+|+|| |+||++|+++.|.+ .++.+.++ .++++++
T Consensus 37 ~~~~~~-a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~-~~~~~v~ 88 (154)
T 2ju5_A 37 AEALEH-SKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAG-VHLHMVE 88 (154)
T ss_dssp HHHHHH-HHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHH-HHCEEEE
T ss_pred HHHHHH-HHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhc-CcEEEEE
Confidence 556676 6678999999999 99999999999999 78766553 3455554
No 162
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.04 E-value=3.8e-10 Score=66.88 Aligned_cols=33 Identities=24% Similarity=0.439 Sum_probs=31.2
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhC
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILE 74 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~ 74 (89)
.++++++|.||++||++|+.+.|.+++++++++
T Consensus 24 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~ 56 (113)
T 1ti3_A 24 GSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP 56 (113)
T ss_dssp TSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC
Confidence 469999999999999999999999999999987
No 163
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.03 E-value=2.5e-10 Score=70.54 Aligned_cols=34 Identities=24% Similarity=0.265 Sum_probs=31.6
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
.+|++++|+||++||++|+.+.|.++++++++++
T Consensus 44 ~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~ 77 (139)
T 3d22_A 44 RDGKIVLANFSARWCGPSRQIAPYYIELSENYPS 77 (139)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT
T ss_pred hcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC
Confidence 4699999999999999999999999999999863
No 164
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.03 E-value=3.4e-10 Score=66.08 Aligned_cols=34 Identities=24% Similarity=0.520 Sum_probs=31.6
Q ss_pred cCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhC
Q psy6924 41 HLKNKIVIMDFFTYCCINCMHILPIPILIRHILE 74 (89)
Q Consensus 41 ~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~ 74 (89)
+.++++++|.||++||++|+.+.|.+++++++++
T Consensus 16 ~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~ 49 (104)
T 2vim_A 16 ENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP 49 (104)
T ss_dssp TTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT
T ss_pred hcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC
Confidence 3478999999999999999999999999999986
No 165
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.03 E-value=3.7e-10 Score=66.05 Aligned_cols=38 Identities=21% Similarity=0.309 Sum_probs=33.5
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
.+++++|.||++||++|+.+.|.+++++++++++ +.++
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~ 54 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGK-IAVY 54 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEE
T ss_pred CCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCc-eEEE
Confidence 5899999999999999999999999999999864 4443
No 166
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.03 E-value=2.5e-10 Score=78.60 Aligned_cols=33 Identities=9% Similarity=0.111 Sum_probs=31.5
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
++++|||+|||+||++|+.+.|.+.+++++|++
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~ 164 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYPM 164 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC
Confidence 589999999999999999999999999999975
No 167
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.02 E-value=3e-10 Score=69.45 Aligned_cols=39 Identities=15% Similarity=0.192 Sum_probs=33.9
Q ss_pred CCCCEEEEEEeCC-------CChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 42 LKNKIVIMDFFTY-------CCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 42 ~~gk~vvv~Fwa~-------wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
.++++++|+|||+ ||++|+.+.|.++++++++++ ++.++
T Consensus 22 ~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~ 67 (123)
T 1wou_A 22 HNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFI 67 (123)
T ss_dssp TTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEE
T ss_pred hCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEE
Confidence 3689999999999 999999999999999999875 34444
No 168
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.02 E-value=2.3e-12 Score=78.20 Aligned_cols=39 Identities=13% Similarity=0.088 Sum_probs=33.7
Q ss_pred cccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhC
Q psy6924 35 PLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILE 74 (89)
Q Consensus 35 ~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~ 74 (89)
.+++ ++..++++||+|||+||++|+++.|.+++++++++
T Consensus 4 ~~~l-a~~~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~ 42 (106)
T 3kp8_A 4 AVGL-AAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP 42 (106)
T ss_dssp HHHH-HHHHHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC
T ss_pred hhHH-HHhcCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC
Confidence 4556 56778899999999999999999999999987774
No 169
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.01 E-value=3.4e-10 Score=71.58 Aligned_cols=33 Identities=9% Similarity=0.259 Sum_probs=30.8
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhC
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILE 74 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~ 74 (89)
.+++++||+||++||++|+++.|.+++++++++
T Consensus 30 ~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~ 62 (153)
T 2wz9_A 30 KAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP 62 (153)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT
T ss_pred cCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC
Confidence 359999999999999999999999999999985
No 170
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.01 E-value=4.9e-10 Score=65.01 Aligned_cols=34 Identities=21% Similarity=0.451 Sum_probs=31.7
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
.++++++|.||++||++|+.+.|.++++++++++
T Consensus 14 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~ 47 (104)
T 2e0q_A 14 ASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ 47 (104)
T ss_dssp HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT
T ss_pred hcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC
Confidence 3689999999999999999999999999999976
No 171
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.00 E-value=6.6e-10 Score=65.10 Aligned_cols=38 Identities=29% Similarity=0.466 Sum_probs=33.5
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
.+++++|+||++||++|+.+.|.+++++++++++ +.++
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~ 54 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGK-LLVA 54 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTT-BEEE
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCc-eEEE
Confidence 6899999999999999999999999999999863 4443
No 172
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.00 E-value=5.3e-10 Score=66.84 Aligned_cols=33 Identities=30% Similarity=0.506 Sum_probs=31.2
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
++++++|+||++||++|+++.|.++++++++++
T Consensus 25 ~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~ 57 (112)
T 1syr_A 25 QNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK 57 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC
Confidence 789999999999999999999999999999874
No 173
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.00 E-value=3.3e-10 Score=69.81 Aligned_cols=34 Identities=15% Similarity=0.071 Sum_probs=31.4
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
.++++++|+||++||++|+++.|.++++++++++
T Consensus 35 ~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~ 68 (125)
T 1r26_A 35 SEDILTVAWFTAVWCGPCKTIERPMEKIAYEFPT 68 (125)
T ss_dssp HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCTT
T ss_pred ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC
Confidence 3789999999999999999999999999999953
No 174
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.00 E-value=1.1e-10 Score=71.04 Aligned_cols=41 Identities=24% Similarity=0.360 Sum_probs=35.6
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEE
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIK 82 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~ 82 (89)
.++++++|.||++||++|+.+.|.+++++++++++++.++.
T Consensus 31 ~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~ 71 (121)
T 2j23_A 31 GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYK 71 (121)
T ss_dssp SSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEE
T ss_pred cCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEE
Confidence 37899999999999999999999999999988876555553
No 175
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.00 E-value=4.5e-10 Score=71.64 Aligned_cols=38 Identities=11% Similarity=0.036 Sum_probs=32.7
Q ss_pred CCEEEEEEeCCCC--hhhhhhccHHHHHHHHhCcCCeEEEE
Q psy6924 44 NKIVIMDFFTYCC--INCMHILPIPILIRHILEYKRTHIIK 82 (89)
Q Consensus 44 gk~vvv~Fwa~wC--~~C~~~~p~l~~l~~~~~~~~~~vi~ 82 (89)
+++|||+|||+|| ++|+++.|.|++++++|+++ +.+++
T Consensus 33 ~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~-v~~~K 72 (137)
T 2qsi_A 33 GKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGR-LVAAE 72 (137)
T ss_dssp SSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTT-EEEEE
T ss_pred CCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCC-cEEEE
Confidence 4599999999999 99999999999999999764 44443
No 176
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=98.99 E-value=4.9e-10 Score=66.86 Aligned_cols=32 Identities=28% Similarity=0.441 Sum_probs=30.6
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhC
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILE 74 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~ 74 (89)
.+++++|+||++||++|+.+.|.+++++++++
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~ 58 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP 58 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC
Confidence 58999999999999999999999999999987
No 177
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=98.99 E-value=3.6e-10 Score=67.67 Aligned_cols=35 Identities=11% Similarity=0.035 Sum_probs=31.6
Q ss_pred cCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 41 HLKNKIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 41 ~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
-.++++++|+||++||++|+.+.|.++++++++++
T Consensus 16 ~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~ 50 (110)
T 2l6c_A 16 FEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAPQ 50 (110)
T ss_dssp HTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCTT
T ss_pred HHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCCC
Confidence 34679999999999999999999999999988864
No 178
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=98.99 E-value=6.7e-10 Score=66.66 Aligned_cols=38 Identities=24% Similarity=0.374 Sum_probs=33.4
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
.+++++|+||++||++|+.+.|.+++++++++++ +.++
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~ 66 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERATD-LTVA 66 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEE
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-eEEE
Confidence 6899999999999999999999999999999764 4443
No 179
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=98.99 E-value=1.8e-10 Score=71.52 Aligned_cols=32 Identities=19% Similarity=0.380 Sum_probs=29.3
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhC
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILE 74 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~ 74 (89)
+++ +++|+|||+||++|+++.|.+++++++++
T Consensus 30 ~~~-~vlv~F~a~wC~~C~~~~p~l~~l~~~~~ 61 (135)
T 3emx_A 30 LQG-DAILAVYSKTCPHCHRDWPQLIQASKEVD 61 (135)
T ss_dssp HTS-SEEEEEEETTCHHHHHHHHHHHHHHTTCC
T ss_pred hCC-cEEEEEECCcCHhhhHhChhHHHHHHHCC
Confidence 345 99999999999999999999999999886
No 180
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.98 E-value=5.5e-10 Score=81.46 Aligned_cols=39 Identities=23% Similarity=0.386 Sum_probs=34.8
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcC-CeEEE
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYK-RTHII 81 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~-~~~vi 81 (89)
.+++|+|+|||+||++|+++.|.++++++++++. ++.++
T Consensus 369 ~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~ 408 (481)
T 3f8u_A 369 ENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIA 408 (481)
T ss_dssp TTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEE
T ss_pred CCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEE
Confidence 5899999999999999999999999999999876 44444
No 181
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.96 E-value=7.6e-10 Score=73.19 Aligned_cols=39 Identities=13% Similarity=0.238 Sum_probs=34.3
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
.++++++|+||++||++|+.+.|.+++++++++++ +.++
T Consensus 112 ~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~-v~~~ 150 (210)
T 3apq_A 112 NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGL-LRIG 150 (210)
T ss_dssp HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTT-BEEE
T ss_pred ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCc-eEEE
Confidence 47899999999999999999999999999999764 4444
No 182
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=98.96 E-value=4.5e-10 Score=66.87 Aligned_cols=35 Identities=17% Similarity=0.353 Sum_probs=32.1
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcC
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILEYK 76 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~ 76 (89)
.++++++|+||++||++|+++.|.++++++++++.
T Consensus 22 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~ 56 (120)
T 1mek_A 22 AAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAE 56 (120)
T ss_dssp HHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTT
T ss_pred ccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhcc
Confidence 36899999999999999999999999999998764
No 183
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=98.95 E-value=1.1e-10 Score=75.10 Aligned_cols=58 Identities=10% Similarity=0.126 Sum_probs=38.2
Q ss_pred cccccccC-CCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHH--HHhCcCCeEEEEE
Q psy6924 25 TKQEWMNT-TEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIR--HILEYKRTHIIKT 83 (89)
Q Consensus 25 ~~~~~~~~-g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~--~~~~~~~~~vi~~ 83 (89)
....|... .+.+.. +...||+|+|+|||+||++|+.+.|.+.+.. .++.+..++.|.+
T Consensus 25 ~~i~W~~~~~~al~~-A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~v 85 (151)
T 3ph9_A 25 DDITWVQTYEEGLFY-AQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNL 85 (151)
T ss_dssp TTSCCCSSHHHHHHH-HHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEE
T ss_pred CCCcchhCHHHHHHH-HHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEe
Confidence 34455431 233444 4457999999999999999999999888642 2232335666554
No 184
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.94 E-value=8.3e-10 Score=77.26 Aligned_cols=34 Identities=15% Similarity=0.245 Sum_probs=32.0
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcC
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYK 76 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~ 76 (89)
.+++++|+|||+||++|+++.|.+++++++++++
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~ 67 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV 67 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC
Confidence 5889999999999999999999999999999874
No 185
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.94 E-value=3.1e-10 Score=78.30 Aligned_cols=65 Identities=9% Similarity=-0.066 Sum_probs=50.9
Q ss_pred ccccCCCCccccccccCCCcccccccC--CCCE-EEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 16 AIFHGRDFCTKQEWMNTTEPLSLNSHL--KNKI-VIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 16 ~~~~ap~~~~~~~~~~~g~~~~l~~~~--~gk~-vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
.+-.+|+|+... .+ | .+++.+++ +||+ ||+.||++||+.|..+++.+++++++|+++++.+|++.
T Consensus 7 iG~~aPdF~l~~--~~-G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS 74 (249)
T 3a2v_A 7 IGERFPEMEVTT--DH-G-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLS 74 (249)
T ss_dssp TTSBCCCEEEEE--TT-E-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEE
T ss_pred CCCCCCCeEEEc--CC-C-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEE
Confidence 345788887433 22 4 67762366 9996 56689999999999999999999999999898888764
No 186
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=98.94 E-value=4.6e-10 Score=76.38 Aligned_cols=67 Identities=15% Similarity=0.043 Sum_probs=56.8
Q ss_pred cccCCCCcccccccc-CCCcccccccCCCCEEEEEEe-CCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 17 IFHGRDFCTKQEWMN-TTEPLSLNSHLKNKIVIMDFF-TYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 17 ~~~ap~~~~~~~~~~-~g~~~~l~~~~~gk~vvv~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
+-.||+|+....+-+ .|+.++| ++++||+|||.|| +.||+.|..++..+++.+++|++.+..+|++.
T Consensus 29 G~~APdF~~~a~l~d~~g~~vsL-sd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS 97 (219)
T 3tue_A 29 NSPAPSFEEVALMPNGSFKKISL-SSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACS 97 (219)
T ss_dssp TSBCCCCEEEEECTTSCEEEEEG-GGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEE
T ss_pred CCcCCCCcccccccCCCCcEEeh-HHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEee
Confidence 446999974332222 2568999 8999999999999 99999999999999999999999999999875
No 187
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=98.93 E-value=1.1e-09 Score=61.87 Aligned_cols=31 Identities=16% Similarity=0.172 Sum_probs=29.1
Q ss_pred CEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 45 KIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 45 k~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
.++++.||++||++|+++.|.++++++++++
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~ 33 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD 33 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC
Confidence 5889999999999999999999999999974
No 188
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=98.92 E-value=7.9e-10 Score=75.41 Aligned_cols=63 Identities=5% Similarity=-0.216 Sum_probs=49.3
Q ss_pred cccccccCCCCccccccccCCCcccccccCCCCEEEEEEeCCC-Chhhh-----hhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 13 PLVAIFHGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYC-CINCM-----HILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 13 p~~~~~~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~w-C~~C~-----~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
++..+-.+|+|+... .+ |+.+++ ++++||+|||+||.+| |++|. .+++.++++ | +++.||++.
T Consensus 21 ~l~vG~~APdFtL~d--~~-G~~vsL-sd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~gv~VvgIS 89 (224)
T 3keb_A 21 FPRKGDYLPSFMLVD--DQ-KHDAAL-ESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PHLKLIVIT 89 (224)
T ss_dssp CCCTTCBCCCCEEEE--TT-SCEEEG-GGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TTSEEEEEE
T ss_pred cCCCCCCCCCeEEEC--CC-CCEEeH-HHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CCCEEEEEE
Confidence 344556899997533 23 889999 8899999999999998 99999 888877776 5 567777664
No 189
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.92 E-value=1.6e-09 Score=76.34 Aligned_cols=35 Identities=20% Similarity=0.406 Sum_probs=33.0
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCC
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYKR 77 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~ 77 (89)
.+++++|+|||+||++|+++.|.+++++++++++.
T Consensus 266 ~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~ 300 (361)
T 3uem_A 266 EKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHE 300 (361)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCS
T ss_pred CCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCC
Confidence 68999999999999999999999999999998764
No 190
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.92 E-value=5.9e-10 Score=71.33 Aligned_cols=40 Identities=3% Similarity=-0.249 Sum_probs=33.9
Q ss_pred CCCEEEEEEeCCC--ChhhhhhccHHHHHHHHhCcCCeEEEE
Q psy6924 43 KNKIVIMDFFTYC--CINCMHILPIPILIRHILEYKRTHIIK 82 (89)
Q Consensus 43 ~gk~vvv~Fwa~w--C~~C~~~~p~l~~l~~~~~~~~~~vi~ 82 (89)
.+++|||+|||+| |++|+++.|.|++++++|+++.+.+++
T Consensus 33 ~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~K 74 (140)
T 2qgv_A 33 QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAI 74 (140)
T ss_dssp TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEE
T ss_pred CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEE
Confidence 5678999999999 999999999999999999875344443
No 191
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.92 E-value=2.5e-09 Score=69.60 Aligned_cols=64 Identities=19% Similarity=0.404 Sum_probs=47.2
Q ss_pred CCCccccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEEeeec
Q psy6924 21 RDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTFQINF 88 (89)
Q Consensus 21 p~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~~~~~ 88 (89)
+++..+.++...++++.. +..++++|++||++|||+|+++.|.+.++.+++++ ++ .+..+|+.|
T Consensus 4 ~~~~eg~~y~~l~~p~~~--~~~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v-~~~~~p~~~ 67 (192)
T 3h93_A 4 DDYTAGKEYVELSSPVPV--SQPGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA-DV-HFVRLPALF 67 (192)
T ss_dssp GGCCBTTTBEECSSCCCC--SSTTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TE-EEEEEECCC
T ss_pred ccccCCCCceEecCCccc--CCCCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC-Ce-EEEEEehhh
Confidence 344445555443456554 34789999999999999999999999999999987 44 345667654
No 192
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.90 E-value=3.4e-09 Score=69.13 Aligned_cols=52 Identities=25% Similarity=0.513 Sum_probs=40.7
Q ss_pred CCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEEeeec
Q psy6924 33 TEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTFQINF 88 (89)
Q Consensus 33 g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~~~~~ 88 (89)
..++.. +..++++|++||++|||+|+++.|.++++.+++++ ++ .+..++++|
T Consensus 16 ~~~~~~--~~~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v-~~~~~~~~~ 67 (195)
T 3hd5_A 16 NPPMPS--DTPGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-DV-VLKQVPIAF 67 (195)
T ss_dssp SSCCCC--SSTTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TE-EEEEEECCS
T ss_pred cCCCcC--CCCCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC-Ce-EEEEEeccc
Confidence 344443 34789999999999999999999999999999987 34 444666654
No 193
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.87 E-value=2.6e-09 Score=80.10 Aligned_cols=33 Identities=12% Similarity=0.204 Sum_probs=31.5
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
.+++|+|+|||+||++|++++|.++++++++++
T Consensus 29 ~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~ 61 (519)
T 3t58_A 29 SSSAWAVEFFASWCGHAIAFAPTWKELANDVKD 61 (519)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGG
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhC
Confidence 579999999999999999999999999999987
No 194
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.86 E-value=4.8e-09 Score=64.95 Aligned_cols=35 Identities=20% Similarity=0.406 Sum_probs=30.6
Q ss_pred EEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 46 IVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 46 ~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
.++|+||++||++|+.+.|.+++++++++++ +.++
T Consensus 52 ~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~-v~~~ 86 (140)
T 1v98_A 52 LTLVDFFAPWCGPCRLVSPILEELARDHAGR-LKVV 86 (140)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEE
T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEE
Confidence 3999999999999999999999999999863 4444
No 195
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=98.86 E-value=1.5e-09 Score=73.15 Aligned_cols=33 Identities=6% Similarity=0.076 Sum_probs=30.8
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
+|++|||+||++||++|+.+.|.+.+++++|++
T Consensus 119 ~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~~ 151 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDALNSSLECLAAEYPM 151 (217)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHTTCTT
T ss_pred CCcEEEEEEECCCCccHHHHHHHHHHHHHHCCC
Confidence 569999999999999999999999999999963
No 196
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=98.85 E-value=1.1e-09 Score=62.00 Aligned_cols=30 Identities=13% Similarity=0.140 Sum_probs=27.9
Q ss_pred EEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 46 IVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 46 ~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
++++.||++||++|+++.|.++++++++++
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~ 32 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD 32 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC
Confidence 568999999999999999999999999985
No 197
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.84 E-value=2.5e-09 Score=78.59 Aligned_cols=39 Identities=15% Similarity=0.264 Sum_probs=33.6
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhC-c-CCeEEE
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILE-Y-KRTHII 81 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~-~-~~~~vi 81 (89)
.+++|+|+|||+||++|+.+.|.+++++++++ + ..+.++
T Consensus 375 ~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~ 415 (504)
T 2b5e_A 375 PKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIA 415 (504)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEE
T ss_pred CCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEE
Confidence 68999999999999999999999999999987 3 244444
No 198
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=98.84 E-value=5.5e-10 Score=68.04 Aligned_cols=45 Identities=18% Similarity=0.371 Sum_probs=34.1
Q ss_pred cccccccCCCCEEEEEEeCCCChhhhhhccHH---HHHHHHhCcCCeEEE
Q psy6924 35 PLSLNSHLKNKIVIMDFFTYCCINCMHILPIP---ILIRHILEYKRTHII 81 (89)
Q Consensus 35 ~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l---~~l~~~~~~~~~~vi 81 (89)
.+.+ +..+||+++|+||++||++|+.+.|.+ +++.+.++. .+.++
T Consensus 19 ~~~~-~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~ 66 (130)
T 2kuc_A 19 ALKR-AEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR-HFVNL 66 (130)
T ss_dssp HHHH-HHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH-HSEEE
T ss_pred HHHH-HHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc-CeEEE
Confidence 4454 446899999999999999999999998 677665543 34443
No 199
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.83 E-value=3.8e-09 Score=69.77 Aligned_cols=33 Identities=15% Similarity=0.167 Sum_probs=29.3
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
.+++++|+|||+||++|+++.|.++++++++++
T Consensus 133 ~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~ 165 (226)
T 1a8l_A 133 DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTK 165 (226)
T ss_dssp CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHhccc
Confidence 455559999999999999999999999999873
No 200
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.82 E-value=6.5e-10 Score=67.48 Aligned_cols=34 Identities=26% Similarity=0.366 Sum_probs=31.5
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
..+++++|+||++||++|+.+.|.++++++++++
T Consensus 34 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~ 67 (130)
T 1wmj_A 34 EAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPG 67 (130)
T ss_dssp TTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCTT
T ss_pred hcCCEEEEEEECCCChhHHHHHHHHHHHHHHCCC
Confidence 3689999999999999999999999999999873
No 201
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.82 E-value=5e-09 Score=76.97 Aligned_cols=40 Identities=20% Similarity=0.424 Sum_probs=35.7
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEE
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIK 82 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~ 82 (89)
.+++++|+|||+||++|+++.|.++++++++++.++.+++
T Consensus 30 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~ 69 (504)
T 2b5e_A 30 SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQ 69 (504)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEE
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEE
Confidence 6899999999999999999999999999999876555554
No 202
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.82 E-value=1.6e-09 Score=71.15 Aligned_cols=55 Identities=16% Similarity=0.187 Sum_probs=37.8
Q ss_pred cccccC-CCcccccccCCCCEEEEEEeCCCChhhhhhccH---HHHHHHHhCcCCeEEEEE
Q psy6924 27 QEWMNT-TEPLSLNSHLKNKIVIMDFFTYCCINCMHILPI---PILIRHILEYKRTHIIKT 83 (89)
Q Consensus 27 ~~~~~~-g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~---l~~l~~~~~~~~~~vi~~ 83 (89)
..|... ++.+.. +..+||+|+|+|||+||++|+.+.|. ..++++.+.+ .++++++
T Consensus 22 v~W~~~~~ea~~~-A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikV 80 (173)
T 3ira_A 22 VDWYPWGEEAFEK-ARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKV 80 (173)
T ss_dssp SCCBCSSHHHHHH-HHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEE
T ss_pred CCCCCcCHHHHHH-HHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHh-cCceeee
Confidence 456543 234555 55689999999999999999998872 2456655544 4666543
No 203
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=98.81 E-value=1.1e-09 Score=67.19 Aligned_cols=39 Identities=23% Similarity=0.348 Sum_probs=28.3
Q ss_pred CCCCEEEEEEeCCCCh--------------hhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 42 LKNKIVIMDFFTYCCI--------------NCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~--------------~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
.++++++|+||++||+ +|+++.|.+++++++++++ +.++
T Consensus 19 ~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~-~~~~ 71 (123)
T 1oaz_A 19 KADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGK-LTVA 71 (123)
T ss_dssp SCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEE
T ss_pred hCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCC-eEEE
Confidence 3689999999999999 9999999999999998763 4443
No 204
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=98.81 E-value=5.6e-09 Score=58.22 Aligned_cols=34 Identities=12% Similarity=0.159 Sum_probs=28.8
Q ss_pred EEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 47 VIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 47 vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
..|+||++||++|+.+.|.++++++++++ .+.++
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~ 35 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI-DAEFE 35 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC-CEEEE
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC-ceEEE
Confidence 35899999999999999999999999875 34444
No 205
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.80 E-value=6.4e-09 Score=74.41 Aligned_cols=33 Identities=12% Similarity=0.309 Sum_probs=30.8
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
.+++++|+|||+||++|+++.|.++++++++++
T Consensus 21 ~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~ 53 (382)
T 2r2j_A 21 NADVALVNFYADWCRFSQMLHPIFEEASDVIKE 53 (382)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHh
Confidence 578999999999999999999999999999853
No 206
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.80 E-value=1.1e-08 Score=67.22 Aligned_cols=46 Identities=20% Similarity=0.492 Sum_probs=39.3
Q ss_pred cCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEEeeec
Q psy6924 41 HLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTFQINF 88 (89)
Q Consensus 41 ~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~~~~~ 88 (89)
+..++++|++||++|||+|+++.|.++++.+++++ + +++..+++.|
T Consensus 21 ~~~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~-~-v~~~~~p~~~ 66 (193)
T 3hz8_A 21 QQAGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD-D-MYLRTEHVVW 66 (193)
T ss_dssp SSTTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT-T-EEEEEEECCC
T ss_pred CCCCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC-C-eEEEEecCCC
Confidence 34689999999999999999999999999999987 3 4566777765
No 207
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.80 E-value=6.3e-09 Score=70.74 Aligned_cols=34 Identities=18% Similarity=0.213 Sum_probs=31.2
Q ss_pred cCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhC
Q psy6924 41 HLKNKIVIMDFFTYCCINCMHILPIPILIRHILE 74 (89)
Q Consensus 41 ~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~ 74 (89)
++.++++++.|||+||++|+++.|.+++++++++
T Consensus 135 ~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~ 168 (243)
T 2hls_A 135 SLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAW 168 (243)
T ss_dssp HCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHH
T ss_pred HcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcc
Confidence 4578899999999999999999999999999983
No 208
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=98.80 E-value=7.5e-09 Score=77.08 Aligned_cols=34 Identities=15% Similarity=0.050 Sum_probs=31.2
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcC
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYK 76 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~ 76 (89)
.+++|||+|||+||++|+++.|.+++++++++++
T Consensus 41 ~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~ 74 (470)
T 3qcp_A 41 PLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVE 74 (470)
T ss_dssp GGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCS
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhh
Confidence 4589999999999999999999999999999843
No 209
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.79 E-value=7.8e-09 Score=66.15 Aligned_cols=45 Identities=16% Similarity=0.321 Sum_probs=38.9
Q ss_pred ccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 30 MNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 30 ~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
++++....+ ++..++++|++||++|||+|+++.|.++++.+++++
T Consensus 9 ~~~~~~~~~-G~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~ 53 (175)
T 3gyk_A 9 FNDPNAPVL-GNPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN 53 (175)
T ss_dssp HCCTTSCEE-ECTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT
T ss_pred hcCCCCCCc-CCCCCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC
Confidence 344556666 788999999999999999999999999999998865
No 210
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.77 E-value=6.6e-09 Score=68.87 Aligned_cols=34 Identities=18% Similarity=0.416 Sum_probs=31.6
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcC
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYK 76 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~ 76 (89)
.+++++|+||++||++|+.+.|.+++++++++++
T Consensus 146 ~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~ 179 (241)
T 3idv_A 146 DADIILVEFYAPWCGHCKKLAPEYEKAAKELSKR 179 (241)
T ss_dssp HCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTS
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhcc
Confidence 5789999999999999999999999999998764
No 211
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.76 E-value=9.5e-09 Score=72.56 Aligned_cols=39 Identities=13% Similarity=0.094 Sum_probs=33.5
Q ss_pred CCCEEEEEEeCCCChhhhhhccH-------HHHHHHHhCcCCeEEEE
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPI-------PILIRHILEYKRTHIIK 82 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~-------l~~l~~~~~~~~~~vi~ 82 (89)
++++++|+|||+||+ |++++|. ++++++++++.++.+.+
T Consensus 27 ~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~ 72 (350)
T 1sji_A 27 KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVM 72 (350)
T ss_dssp TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEE
T ss_pred hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEE
Confidence 578999999999999 9999999 89999999876655543
No 212
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=98.76 E-value=1e-08 Score=63.37 Aligned_cols=39 Identities=10% Similarity=-0.121 Sum_probs=32.2
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEE
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIK 82 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~ 82 (89)
.+++|+|.|+|+|||+|+++.|.+++++++ .+-.+..+.
T Consensus 23 ~~~~vvi~khatwCgpc~~~~~~~e~~~~~-~~v~~~~vd 61 (112)
T 3iv4_A 23 ENKYVFVLKHSETCPISANAYDQFNKFLYE-RDMDGYYLI 61 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHH-HTCCEEEEE
T ss_pred cCCCEEEEEECCcCHhHHHHHHHHHHHhcc-CCceEEEEE
Confidence 389999999999999999999999999885 444444443
No 213
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.22 E-value=9.7e-10 Score=63.93 Aligned_cols=34 Identities=29% Similarity=0.403 Sum_probs=31.4
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
..+++++|.||++||++|+.+.|.++++++++++
T Consensus 17 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~ 50 (106)
T 2yj7_A 17 KSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG 50 (106)
Confidence 3688999999999999999999999999998875
No 214
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.73 E-value=1.6e-08 Score=66.88 Aligned_cols=32 Identities=9% Similarity=0.163 Sum_probs=29.6
Q ss_pred CCCEEEEEEeC-------CCChhhhhhccHHHHHHHHhC
Q psy6924 43 KNKIVIMDFFT-------YCCINCMHILPIPILIRHILE 74 (89)
Q Consensus 43 ~gk~vvv~Fwa-------~wC~~C~~~~p~l~~l~~~~~ 74 (89)
++.+|||+||| .||++|+++.|.+++++++|.
T Consensus 36 ~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~ 74 (178)
T 3ga4_A 36 PGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIR 74 (178)
T ss_dssp TTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhh
Confidence 56799999999 499999999999999999986
No 215
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.73 E-value=1.1e-08 Score=74.49 Aligned_cols=34 Identities=15% Similarity=0.228 Sum_probs=32.0
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcC
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYK 76 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~ 76 (89)
.+++++|+|||+||++|+++.|.+++++++++++
T Consensus 20 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~ 53 (481)
T 3f8u_A 20 SAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI 53 (481)
T ss_dssp SSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT
T ss_pred CCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc
Confidence 4599999999999999999999999999999876
No 216
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.68 E-value=3.8e-09 Score=70.26 Aligned_cols=45 Identities=16% Similarity=0.481 Sum_probs=36.4
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHH---HHHHHHhCcCCeEEEEEEeeec
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIP---ILIRHILEYKRTHIIKTFQINF 88 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l---~~l~~~~~~~~~~vi~~~~~~~ 88 (89)
..++++||+||++|||+|+++.|.+ +++.++++++ + .+.-++++|
T Consensus 111 ~~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~-v-~~~~~~v~~ 158 (197)
T 1un2_A 111 VAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEG-V-KMTKYHVNF 158 (197)
T ss_dssp CTTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTT-C-CEEEEECSS
T ss_pred CCCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCC-C-EEEEeccCc
Confidence 4578999999999999999999998 9999999763 3 344456654
No 217
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=98.67 E-value=1.2e-08 Score=67.26 Aligned_cols=50 Identities=16% Similarity=0.041 Sum_probs=43.3
Q ss_pred CcccccccC-CCCE-EEEEEeCCCChhhhh-hccHHHHHHHHhCcCCe-EEEEEE
Q psy6924 34 EPLSLNSHL-KNKI-VIMDFFTYCCINCMH-ILPIPILIRHILEYKRT-HIIKTF 84 (89)
Q Consensus 34 ~~~~l~~~~-~gk~-vvv~Fwa~wC~~C~~-~~p~l~~l~~~~~~~~~-~vi~~~ 84 (89)
+.+++ +++ +||+ ||+.||+.|||.|.. ++|.+++.+++|++++. .|+++.
T Consensus 37 ~~vsL-sd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS 90 (176)
T 4f82_A 37 NACSV-RDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVS 90 (176)
T ss_dssp EEEEH-HHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred eEEeH-HHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 46888 776 9985 566889999999999 99999999999999998 888764
No 218
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=98.67 E-value=3.8e-08 Score=69.76 Aligned_cols=58 Identities=10% Similarity=0.058 Sum_probs=45.1
Q ss_pred cCCCCccccccccCCCcccccccCCCCEEEEEEe-CCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 19 HGRDFCTKQEWMNTTEPLSLNSHLKNKIVIMDFF-TYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 19 ~ap~~~~~~~~~~~g~~~~l~~~~~gk~vvv~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
++|+|+... .+ |++++| ++++||+|||+|| +.||+.|..+++.+++ ...+++.|+++.
T Consensus 3 k~p~F~l~~--~~-G~~~~L-sd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~----~~~~~~~v~gis 61 (322)
T 4eo3_A 3 RVKHFELLT--DE-GKTFTH-VDLYGKYTILFFFPKAGTSGSTREAVEFSR----ENFEKAQVVGIS 61 (322)
T ss_dssp BCCCCEEEE--TT-SCEEEG-GGTTTSEEEEEECSSTTSHHHHHHHHHHHH----SCCTTEEEEEEE
T ss_pred CCCCcEEEC--CC-cCEEeH-HHhCCCeEEEEEECCCCCCCCHHHHHHHHH----HhhCCCEEEEEe
Confidence 688887543 23 899999 8999999999999 6799999998877654 234467777654
No 219
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.64 E-value=4.3e-08 Score=64.96 Aligned_cols=32 Identities=19% Similarity=0.129 Sum_probs=28.7
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhC
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILE 74 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~ 74 (89)
.+++++++||++||++|+++.|.+++++++++
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~ 166 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAND 166 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHCC
Confidence 45566899999999999999999999999984
No 220
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.64 E-value=3.9e-08 Score=75.54 Aligned_cols=41 Identities=15% Similarity=0.095 Sum_probs=35.4
Q ss_pred cCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEE
Q psy6924 41 HLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIK 82 (89)
Q Consensus 41 ~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~ 82 (89)
+..+++++|+|||+||++|++++|.+++++++++++ +.+++
T Consensus 452 ~~~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~-v~~~~ 492 (780)
T 3apo_A 452 ASDKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQ-LKVGT 492 (780)
T ss_dssp TTCCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEE
T ss_pred HcCCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEE
Confidence 348999999999999999999999999999999864 44443
No 221
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.62 E-value=7.7e-08 Score=62.41 Aligned_cols=59 Identities=20% Similarity=0.579 Sum_probs=43.2
Q ss_pred ccccccCCCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEEeeec
Q psy6924 26 KQEWMNTTEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTFQINF 88 (89)
Q Consensus 26 ~~~~~~~g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~~~~~ 88 (89)
+.++...+.++. .+..++++|++||.+|||+|+.+.|.+.++.+++++ .+ .+..+++.|
T Consensus 6 g~~y~~~~~p~~--g~~~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v-~~~~~p~~~ 64 (195)
T 2znm_A 6 GEDYLVLDKPIP--QEQSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS-DA-YLRTEHVVW 64 (195)
T ss_dssp TTTEEECSSCCC--CSSSSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT-TE-EEEEEECCC
T ss_pred CCcceEecCCCC--CCCCCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC-ce-EEEEecccc
Confidence 334443334443 345789999999999999999999999999999876 33 445566543
No 222
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.60 E-value=4.3e-08 Score=75.34 Aligned_cols=38 Identities=13% Similarity=0.125 Sum_probs=33.6
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEE
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHII 81 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi 81 (89)
.+++++|+|||+||++|+++.|.+++++++++++ +.++
T Consensus 674 ~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~~-~~~~ 711 (780)
T 3apo_A 674 GKTHWVVDFYAPWSGPSQNFAPEFELLARMIKGK-VRAG 711 (780)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-CEEE
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-ceEE
Confidence 6899999999999999999999999999999763 4444
No 223
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.52 E-value=2.2e-08 Score=59.95 Aligned_cols=30 Identities=13% Similarity=0.234 Sum_probs=24.7
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHH
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHI 72 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~ 72 (89)
.+++++++ ||++||++|+++.|.|+++..+
T Consensus 17 ~~~~~vv~-f~a~~C~~C~~~~~~l~~~~~~ 46 (116)
T 2e7p_A 17 ASSAPVVV-FSKTYCGYCNRVKQLLTQVGAS 46 (116)
T ss_dssp HTSSSEEE-EECTTCHHHHHHHHHHHHHTCC
T ss_pred HcCCCEEE-EECCCChhHHHHHHHHHHcCCC
Confidence 35566766 9999999999999999988544
No 224
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.52 E-value=8.5e-08 Score=63.95 Aligned_cols=35 Identities=17% Similarity=0.156 Sum_probs=30.2
Q ss_pred ccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHH
Q psy6924 36 LSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRH 71 (89)
Q Consensus 36 ~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~ 71 (89)
+.+ .+..++++|+.||++|||+|+++.|.++++.+
T Consensus 79 ~~~-g~~~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~ 113 (216)
T 1eej_A 79 IVY-KAPQEKHVITVFTDITCGYCHKLHEQMADYNA 113 (216)
T ss_dssp EEE-CCTTCCEEEEEEECTTCHHHHHHHTTHHHHHH
T ss_pred eee-cCCCCCEEEEEEECCCCHHHHHHHHHHHHHHh
Confidence 344 45578999999999999999999999999875
No 225
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=98.46 E-value=1.4e-07 Score=61.61 Aligned_cols=41 Identities=20% Similarity=0.314 Sum_probs=34.4
Q ss_pred CCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEEeeec
Q psy6924 44 NKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTFQINF 88 (89)
Q Consensus 44 gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~~~~~ 88 (89)
++++||+|++.|||+|+++.|.++++.+++ + + .+.-+++.|
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~-~--v-~~~~~p~~~ 62 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA-G--T-DIGKMHITF 62 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH-T--S-CCEEEECCS
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh-C--C-eEEEEeccC
Confidence 789999999999999999999999999998 3 3 334566655
No 226
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.43 E-value=7.5e-07 Score=57.49 Aligned_cols=58 Identities=12% Similarity=0.196 Sum_probs=41.9
Q ss_pred ccccccCCCcccccccC-CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEEeee
Q psy6924 26 KQEWMNTTEPLSLNSHL-KNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTFQIN 87 (89)
Q Consensus 26 ~~~~~~~g~~~~l~~~~-~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~~~~ 87 (89)
+.++...+.|+. .+. .++++|+.||.++||+|..+.+.+.++.+++++ .+. +..+++.
T Consensus 8 g~~y~~~~~p~~--g~~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~-~~~~p~~ 66 (193)
T 2rem_A 8 GEDYVEIPDGRP--FAPLAGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK-DVR-FTLVPAV 66 (193)
T ss_dssp TTTEEECTTCCC--SSCCTTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TEE-EEEEECC
T ss_pred CCcceeccCCCC--CCCCCCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC-ceE-EEEeCcc
Confidence 444443344544 343 789999999999999999999999999999875 343 4445553
No 227
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.40 E-value=3.6e-07 Score=65.19 Aligned_cols=40 Identities=15% Similarity=-0.032 Sum_probs=31.3
Q ss_pred CCCEEEEEEeCCCChhhhhhc------cHHHHHHHHhCcCCeEEEE
Q psy6924 43 KNKIVIMDFFTYCCINCMHIL------PIPILIRHILEYKRTHIIK 82 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~------p~l~~l~~~~~~~~~~vi~ 82 (89)
.+++++|+|||+||++|+... |.++++++++++.++.+.+
T Consensus 29 ~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~ 74 (367)
T 3us3_A 29 KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGL 74 (367)
T ss_dssp HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEE
T ss_pred hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEE
Confidence 578999999999999974433 6889999998876655443
No 228
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.38 E-value=9.4e-07 Score=56.37 Aligned_cols=40 Identities=10% Similarity=0.196 Sum_probs=35.2
Q ss_pred CCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHh
Q psy6924 33 TEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHIL 73 (89)
Q Consensus 33 g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~ 73 (89)
.....+ ++..++++|+.|+.++||+|+.+.+.+.++.++|
T Consensus 17 ~~~~~~-G~~~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~ 56 (175)
T 1z6m_A 17 ETGLHI-GESNAPVKMIEFINVRCPYCRKWFEESEELLAQS 56 (175)
T ss_dssp SSSEEE-SCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCccc-CCCCCCeEEEEEECCCCcchHHHHHHHHHHHHHH
Confidence 445566 6778999999999999999999999999999888
No 229
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.37 E-value=3.1e-07 Score=56.76 Aligned_cols=33 Identities=6% Similarity=-0.221 Sum_probs=30.3
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcC
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYK 76 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~ 76 (89)
.+++|+++|||+ |++|+++.|.+++++++|+++
T Consensus 22 ~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk 54 (133)
T 2djk_A 22 AGIPLAYIFAET-AEERKELSDKLKPIAEAQRGV 54 (133)
T ss_dssp TTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT
T ss_pred CCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe
Confidence 467899999999 899999999999999999875
No 230
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.34 E-value=2.3e-07 Score=58.57 Aligned_cols=30 Identities=0% Similarity=-0.300 Sum_probs=22.9
Q ss_pred CCEEEEEEeCCC--ChhhhhhccHHHHHHHHh
Q psy6924 44 NKIVIMDFFTYC--CINCMHILPIPILIRHIL 73 (89)
Q Consensus 44 gk~vvv~Fwa~w--C~~C~~~~p~l~~l~~~~ 73 (89)
++.+||.||++| |++|+++.|.+++++++|
T Consensus 34 ~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~ 65 (142)
T 2es7_A 34 VGDGVILLSSDPRRTPEVSDNPVMIAELLREF 65 (142)
T ss_dssp CCSEEEEECCCSCC----CCHHHHHHHHHHTC
T ss_pred CCCEEEEEECCCCCCccHHHHHHHHHHHHHHh
Confidence 345788999987 999999999999999999
No 231
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.30 E-value=5.5e-07 Score=59.28 Aligned_cols=32 Identities=13% Similarity=0.342 Sum_probs=28.5
Q ss_pred cCCCCEEEEEEeCC-CChhhhhhccHHHHHHHH
Q psy6924 41 HLKNKIVIMDFFTY-CCINCMHILPIPILIRHI 72 (89)
Q Consensus 41 ~~~gk~vvv~Fwa~-wC~~C~~~~p~l~~l~~~ 72 (89)
+.+++++++.||++ ||++|+++.|.++++++.
T Consensus 19 ~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~ 51 (226)
T 1a8l_A 19 KMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL 51 (226)
T ss_dssp GCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT
T ss_pred hcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh
Confidence 35677889999999 999999999999999865
No 232
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=98.29 E-value=2.7e-07 Score=57.11 Aligned_cols=27 Identities=15% Similarity=0.182 Sum_probs=19.9
Q ss_pred cCCCCEEEEEEeCCCChhhhhhccHHH
Q psy6924 41 HLKNKIVIMDFFTYCCINCMHILPIPI 67 (89)
Q Consensus 41 ~~~gk~vvv~Fwa~wC~~C~~~~p~l~ 67 (89)
+-+...+||+|||+||++|+++.+.+.
T Consensus 15 ~~~~~~~LV~F~A~wC~~Ck~~~~~i~ 41 (116)
T 3dml_A 15 DDKAELRLLMFEQPGCLYCARWDAEIA 41 (116)
T ss_dssp ----CEEEEEEECTTCHHHHHHHHHTT
T ss_pred cccCCCEEEEEECCCCHHHHHHHHHHH
Confidence 345678999999999999999875443
No 233
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.29 E-value=7.1e-07 Score=50.48 Aligned_cols=28 Identities=11% Similarity=0.116 Sum_probs=25.3
Q ss_pred EEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 48 IMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 48 vv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
++.||++||++|++..+.|+++.+++++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~ 30 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDD 30 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSS
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCC
Confidence 6779999999999999999999988764
No 234
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=98.28 E-value=5.9e-07 Score=58.77 Aligned_cols=69 Identities=9% Similarity=-0.006 Sum_probs=55.0
Q ss_pred cccccccccCCCCccccccccCC--Cccccccc-CCCCEEEEEEe-CCCChhhhhhccHHHHHHHHhCcCCeE-EEEEE
Q psy6924 11 PVPLVAIFHGRDFCTKQEWMNTT--EPLSLNSH-LKNKIVIMDFF-TYCCINCMHILPIPILIRHILEYKRTH-IIKTF 84 (89)
Q Consensus 11 ~~p~~~~~~ap~~~~~~~~~~~g--~~~~l~~~-~~gk~vvv~Fw-a~wC~~C~~~~p~l~~l~~~~~~~~~~-vi~~~ 84 (89)
..|...+-++|+|+.. +.| +.+++ ++ ++||+|||.|+ +.|||.|..+.+.+++.++++++.+.. |+++.
T Consensus 11 ~~~~~vGd~aPdf~l~----~~g~~~~v~L-~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS 84 (171)
T 2xhf_A 11 GSPIKVGDIIPDVLVY----EDVPSKSFPI-HDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIA 84 (171)
T ss_dssp CCCCCTTCBCCCCEEE----CSSTTCEEET-HHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEE
T ss_pred CCcccCcCCCCCeEEe----cCCCCcEEEh-HHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 3455566789999854 224 78999 78 59998888876 469999999999999999999998885 77764
No 235
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.25 E-value=7.4e-07 Score=54.35 Aligned_cols=30 Identities=7% Similarity=0.061 Sum_probs=27.1
Q ss_pred CEEEEEEeCCCChhhhhhccHHHHHHHHhC
Q psy6924 45 KIVIMDFFTYCCINCMHILPIPILIRHILE 74 (89)
Q Consensus 45 k~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~ 74 (89)
..+|+.||++||++|++..|.|++++++++
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~~ 58 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKSW 58 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHSC
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhcC
Confidence 367889999999999999999999998874
No 236
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.20 E-value=3.6e-07 Score=54.34 Aligned_cols=38 Identities=13% Similarity=0.070 Sum_probs=28.3
Q ss_pred CCcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHH
Q psy6924 33 TEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIR 70 (89)
Q Consensus 33 g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~ 70 (89)
|....+.+....+++|+.||++||++|++..+.|+++.
T Consensus 4 ~~~~~l~~~~~~~~~v~~f~~~~C~~C~~~~~~L~~l~ 41 (100)
T 1wjk_A 4 GSSGNLSASNRALPVLTLFTKAPCPLCDEAKEVLQPYK 41 (100)
T ss_dssp CCCCCCCCSCCCCCEEEEEECSSCHHHHHHHHHTSTTS
T ss_pred CcchhhhhccCCCCEEEEEeCCCCcchHHHHHHHHHhh
Confidence 33334423445677889999999999999999988764
No 237
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.17 E-value=5.6e-07 Score=50.95 Aligned_cols=27 Identities=11% Similarity=0.053 Sum_probs=23.4
Q ss_pred EEEEeCCCChhhhhhccHHHHHHHHhC
Q psy6924 48 IMDFFTYCCINCMHILPIPILIRHILE 74 (89)
Q Consensus 48 vv~Fwa~wC~~C~~~~p~l~~l~~~~~ 74 (89)
++.||++||++|+++.+.++++.++++
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~ 30 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSK 30 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTT
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcC
Confidence 567999999999999999999876654
No 238
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=98.16 E-value=7.7e-07 Score=58.14 Aligned_cols=35 Identities=23% Similarity=0.539 Sum_probs=30.1
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHH---HHHHHHhCcC
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIP---ILIRHILEYK 76 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l---~~l~~~~~~~ 76 (89)
..++++||+||++|||+|+++.|.+ .++.++++++
T Consensus 12 ~~~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~ 49 (189)
T 3l9v_A 12 VVDAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQG 49 (189)
T ss_dssp CTTCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTT
T ss_pred CCCCCEEEEEECCCChhHHHHhHhccchHHHHHhCCCC
Confidence 4567999999999999999999987 6888888764
No 239
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.12 E-value=2e-06 Score=57.20 Aligned_cols=30 Identities=17% Similarity=0.211 Sum_probs=27.2
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHH
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRH 71 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~ 71 (89)
-.++++|+.||++|||+|+++.|.++++.+
T Consensus 84 ~~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~ 113 (211)
T 1t3b_A 84 KNEKHVVTVFMDITCHYCHLLHQQLKEYND 113 (211)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHTTHHHHHH
T ss_pred CCCCEEEEEEECCCCHhHHHHHHHHHHHHh
Confidence 367899999999999999999999999765
No 240
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.11 E-value=5.6e-07 Score=52.73 Aligned_cols=25 Identities=12% Similarity=0.057 Sum_probs=22.2
Q ss_pred EEEEeCCCChhhhhhccHHHHHHHH
Q psy6924 48 IMDFFTYCCINCMHILPIPILIRHI 72 (89)
Q Consensus 48 vv~Fwa~wC~~C~~~~p~l~~l~~~ 72 (89)
|+.||++||++|++..|.|+++..+
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~ 27 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAG 27 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCC
T ss_pred EEEEECCCCchHHHHHHHHHHHHHh
Confidence 6789999999999999999987654
No 241
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.09 E-value=2.3e-06 Score=63.47 Aligned_cols=33 Identities=12% Similarity=0.392 Sum_probs=30.3
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhC
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILE 74 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~ 74 (89)
..+++.++.||++||++|+++.|.+++++.+++
T Consensus 115 ~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~ 147 (521)
T 1hyu_A 115 IDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP 147 (521)
T ss_dssp CCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT
T ss_pred cCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC
Confidence 457789999999999999999999999999886
No 242
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.02 E-value=8.7e-07 Score=62.41 Aligned_cols=29 Identities=14% Similarity=0.088 Sum_probs=25.4
Q ss_pred CEEEEEEeCCCChhhhhhccHHHHHHHHh
Q psy6924 45 KIVIMDFFTYCCINCMHILPIPILIRHIL 73 (89)
Q Consensus 45 k~vvv~Fwa~wC~~C~~~~p~l~~l~~~~ 73 (89)
+..+++|||+||++|+++.|.++++++++
T Consensus 198 ~~~vV~F~A~WC~~Ck~l~p~le~lA~~l 226 (291)
T 3kp9_A 198 QIGGTMYGAYWCPHCQDQKELFGAAFDQV 226 (291)
T ss_dssp HTTCEEEECTTCHHHHHHHHHHGGGGGGS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 34468999999999999999999998766
No 243
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=97.98 E-value=6.9e-06 Score=54.01 Aligned_cols=50 Identities=10% Similarity=0.036 Sum_probs=41.7
Q ss_pred Cccccccc-CCCCEEEEEE-eCCCChhhh-hhccHHHHHHHHh-CcCCeE-EEEEE
Q psy6924 34 EPLSLNSH-LKNKIVIMDF-FTYCCINCM-HILPIPILIRHIL-EYKRTH-IIKTF 84 (89)
Q Consensus 34 ~~~~l~~~-~~gk~vvv~F-wa~wC~~C~-~~~p~l~~l~~~~-~~~~~~-vi~~~ 84 (89)
+.+++ ++ ++||+|||.| .+.|||.|. .+.+.+++.++++ +..+.. |+++.
T Consensus 33 ~~v~l-~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~~V~gvS 87 (182)
T 1xiy_A 33 TSIDT-HELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFDDIYCIT 87 (182)
T ss_dssp EEEEH-HHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCSEEEEEE
T ss_pred eeEeH-HHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 68888 67 6998877766 567999999 9999999999999 888874 77664
No 244
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.98 E-value=1.6e-05 Score=50.39 Aligned_cols=38 Identities=21% Similarity=0.466 Sum_probs=33.5
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeE
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTH 79 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~ 79 (89)
..++++||+|+...||+|+++.+.+.++.+++.++...
T Consensus 19 ~~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~ 56 (184)
T 4dvc_A 19 ASSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKF 56 (184)
T ss_dssp CCSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEE
T ss_pred CCCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEE
Confidence 35789999999999999999999999999999876543
No 245
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.97 E-value=1.5e-05 Score=53.88 Aligned_cols=37 Identities=11% Similarity=0.055 Sum_probs=31.1
Q ss_pred cccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHH
Q psy6924 35 PLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHI 72 (89)
Q Consensus 35 ~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~ 72 (89)
.+.+ .+..++++|+.||.+|||+|+++.+.++++.++
T Consensus 89 ~i~~-G~~~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~ 125 (241)
T 1v58_A 89 WLLD-GKKDAPVIVYVFADPFCPYCKQFWQQARPWVDS 125 (241)
T ss_dssp CEEE-SCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHT
T ss_pred CceE-CCCCCCeEEEEEECCCChhHHHHHHHHHHHHhC
Confidence 3444 555789999999999999999999999988765
No 246
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=97.90 E-value=1.1e-05 Score=51.77 Aligned_cols=23 Identities=13% Similarity=0.314 Sum_probs=20.4
Q ss_pred cCCCCEEEEEEeCCCChhhhhhc
Q psy6924 41 HLKNKIVIMDFFTYCCINCMHIL 63 (89)
Q Consensus 41 ~~~gk~vvv~Fwa~wC~~C~~~~ 63 (89)
..++|+|+|+|+++||.+|+.+.
T Consensus 39 k~~~K~vlvd~~a~wC~~C~~me 61 (153)
T 2dlx_A 39 QMQNKWLMINIQNVQDFACQCLN 61 (153)
T ss_dssp HHHTCEEEEEEECSCTTTHHHHH
T ss_pred HHcCCeEEEEEECCCCHhHHHHH
Confidence 34699999999999999999874
No 247
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.90 E-value=8.1e-06 Score=53.55 Aligned_cols=36 Identities=14% Similarity=0.416 Sum_probs=31.5
Q ss_pred cCCCCEEEEEEeCCCChhhhhhccHH---HHHHHHhCcC
Q psy6924 41 HLKNKIVIMDFFTYCCINCMHILPIP---ILIRHILEYK 76 (89)
Q Consensus 41 ~~~gk~vvv~Fwa~wC~~C~~~~p~l---~~l~~~~~~~ 76 (89)
...++++|++|+..+||+|+++.|.+ .++.++++++
T Consensus 18 p~~~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~ 56 (191)
T 3l9s_A 18 PVAGEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEG 56 (191)
T ss_dssp CCCSSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTT
T ss_pred CCCCCCeEEEEECCCChhHHHhChhccchHHHHHhCCCC
Confidence 34568999999999999999999987 6999999875
No 248
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=97.83 E-value=2.5e-05 Score=53.71 Aligned_cols=29 Identities=3% Similarity=-0.181 Sum_probs=26.5
Q ss_pred CCCEEEEEEe--CCCChhhhhhccHHHHHHHHhCc
Q psy6924 43 KNKIVIMDFF--TYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 43 ~gk~vvv~Fw--a~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
.+++|+|+|| |+||+ +.|.++++++++++
T Consensus 32 ~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~ 62 (248)
T 2c0g_A 32 RFPYSVVKFDIASPYGE----KHEAFTAFSKSAHK 62 (248)
T ss_dssp TSSEEEEEEEESSCCSH----HHHHHHHHHHHHHH
T ss_pred cCCCEEEEEECCCCCCc----cHHHHHHHHHHHhc
Confidence 5789999999 99998 99999999999965
No 249
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=97.77 E-value=1.9e-05 Score=52.06 Aligned_cols=33 Identities=15% Similarity=0.116 Sum_probs=25.7
Q ss_pred CCCCEEEEEE----eCCCChhhhhhccHHHHHHHHhC
Q psy6924 42 LKNKIVIMDF----FTYCCINCMHILPIPILIRHILE 74 (89)
Q Consensus 42 ~~gk~vvv~F----wa~wC~~C~~~~p~l~~l~~~~~ 74 (89)
.++.++|+.| |++||++|+.+.|.+.++++++.
T Consensus 19 ~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~ 55 (229)
T 2ywm_A 19 FKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAV 55 (229)
T ss_dssp CCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHH
T ss_pred ccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccC
Confidence 3455555555 58999999999999999988873
No 250
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.67 E-value=1.2e-05 Score=47.13 Aligned_cols=27 Identities=11% Similarity=0.162 Sum_probs=22.2
Q ss_pred EEEEeCCCChhhhhhccHHHHHHHHhC
Q psy6924 48 IMDFFTYCCINCMHILPIPILIRHILE 74 (89)
Q Consensus 48 vv~Fwa~wC~~C~~~~p~l~~l~~~~~ 74 (89)
++.|+++||++|++..+.|+++..+++
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~~~~~~~ 40 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQLPFKEG 40 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHHSCBCTT
T ss_pred EEEEEcCCCHhHHHHHHHHHHcCCCCC
Confidence 556999999999999999988755543
No 251
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=97.64 E-value=6.1e-05 Score=51.44 Aligned_cols=30 Identities=17% Similarity=-0.064 Sum_probs=26.9
Q ss_pred CCCEEEEEEeC--CCChhhhhhccHHHHHHHHhCcC
Q psy6924 43 KNKIVIMDFFT--YCCINCMHILPIPILIRHILEYK 76 (89)
Q Consensus 43 ~gk~vvv~Fwa--~wC~~C~~~~p~l~~l~~~~~~~ 76 (89)
.+++|+|+||| +||+ +.|.++++++++++.
T Consensus 21 ~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~ 52 (240)
T 2qc7_A 21 KSKFVLVKFDTQYPYGE----KQDEFKRLAENSASS 52 (240)
T ss_dssp GCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCC
Confidence 46899999999 9999 999999999999753
No 252
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=97.60 E-value=7.8e-05 Score=50.36 Aligned_cols=32 Identities=19% Similarity=0.199 Sum_probs=28.8
Q ss_pred CCCEEEEEEeCCC--ChhhhhhccHHHHHHHHhC
Q psy6924 43 KNKIVIMDFFTYC--CINCMHILPIPILIRHILE 74 (89)
Q Consensus 43 ~gk~vvv~Fwa~w--C~~C~~~~p~l~~l~~~~~ 74 (89)
-+++|+|.||++| |++|++..+.++++++.++
T Consensus 24 ~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~ 57 (243)
T 2hls_A 24 MVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESP 57 (243)
T ss_dssp CCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhcc
Confidence 3578999999999 9999999999999998853
No 253
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=97.58 E-value=7.2e-05 Score=52.40 Aligned_cols=33 Identities=15% Similarity=-0.047 Sum_probs=30.5
Q ss_pred CCEEEEEEeCCCChhhhhhccHHHHHHHHhCcC
Q psy6924 44 NKIVIMDFFTYCCINCMHILPIPILIRHILEYK 76 (89)
Q Consensus 44 gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~ 76 (89)
.++++|.|+++||++|++..|.+++++++++++
T Consensus 135 ~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~ 167 (361)
T 3uem_A 135 IKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK 167 (361)
T ss_dssp CCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT
T ss_pred CCcEEEEEEeCCchhHHHHHHHHHHHHHHccCc
Confidence 457899999999999999999999999999876
No 254
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.55 E-value=4.4e-05 Score=42.60 Aligned_cols=22 Identities=14% Similarity=0.116 Sum_probs=19.1
Q ss_pred EEEEeCCCChhhhhhccHHHHH
Q psy6924 48 IMDFFTYCCINCMHILPIPILI 69 (89)
Q Consensus 48 vv~Fwa~wC~~C~~~~p~l~~l 69 (89)
++.||++||++|++..+.|++.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~ 24 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR 24 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT
T ss_pred EEEEcCCCChhHHHHHHHHHHC
Confidence 5679999999999999888764
No 255
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=97.52 E-value=0.00029 Score=46.39 Aligned_cols=38 Identities=16% Similarity=0.178 Sum_probs=31.6
Q ss_pred ccCCCCEEEEEEeCCCChhhhhhccHH-HHHHHHhCcCC
Q psy6924 40 SHLKNKIVIMDFFTYCCINCMHILPIP-ILIRHILEYKR 77 (89)
Q Consensus 40 ~~~~gk~vvv~Fwa~wC~~C~~~~p~l-~~l~~~~~~~~ 77 (89)
.+..++++|+.|+...||.|+++.+.+ ..+.++|.+.+
T Consensus 25 G~~~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g 63 (202)
T 3gha_A 25 GKDDAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKG 63 (202)
T ss_dssp SCTTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTT
T ss_pred cCCCCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCC
Confidence 566789999999999999999998876 66777886544
No 256
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=97.44 E-value=0.00017 Score=46.14 Aligned_cols=34 Identities=12% Similarity=0.236 Sum_probs=30.2
Q ss_pred CCCEEEEEEeCCCChhhhhhccHH-HHHHHHhCcC
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIP-ILIRHILEYK 76 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l-~~l~~~~~~~ 76 (89)
.+++++|+||..+||+|....+.+ .++.++++++
T Consensus 16 ~~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~ 50 (195)
T 3c7m_A 16 NADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDI 50 (195)
T ss_dssp SCTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTT
T ss_pred CCCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCCc
Confidence 467889999999999999999999 9999988754
No 257
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=97.34 E-value=0.00035 Score=45.51 Aligned_cols=51 Identities=14% Similarity=-0.011 Sum_probs=39.2
Q ss_pred CcccccccCCCCEEEEEEeCCCChhhhhhccHHHHHHHHh-CcCCeEEEEEEeee
Q psy6924 34 EPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILIRHIL-EYKRTHIIKTFQIN 87 (89)
Q Consensus 34 ~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~-~~~~~~vi~~~~~~ 87 (89)
.++.+ . .++++|+.|....||.|++..+.+.++.+++ +++--.++..+|+.
T Consensus 7 d~~~~-g--~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~~p~~ 58 (182)
T 3gn3_A 7 DALSW-G--HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRLQSQP 58 (182)
T ss_dssp GSSEE-E--CCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEECCCT
T ss_pred ccccc-C--CCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEEcCCC
Confidence 34555 4 5789999999999999999999998887776 55545666666653
No 258
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.30 E-value=0.00013 Score=46.17 Aligned_cols=34 Identities=12% Similarity=0.052 Sum_probs=27.8
Q ss_pred cccccccCCCCEEEEEEeCCCChhhhhhccHHHHH
Q psy6924 35 PLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILI 69 (89)
Q Consensus 35 ~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l 69 (89)
.+.. ..-.++++|+.|+.++||+|++..+.++++
T Consensus 6 ai~~-~~~~a~~~vv~f~D~~Cp~C~~~~~~l~~l 39 (147)
T 3gv1_A 6 AIKE-VRGNGKLKVAVFSDPDCPFCKRLEHEFEKM 39 (147)
T ss_dssp SEEE-EETTCCEEEEEEECTTCHHHHHHHHHHTTC
T ss_pred Ceee-ecCCCCEEEEEEECCCChhHHHHHHHHhhc
Confidence 3444 455789999999999999999999887654
No 259
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.25 E-value=0.00014 Score=39.63 Aligned_cols=22 Identities=14% Similarity=0.184 Sum_probs=19.1
Q ss_pred EEEEeCCCChhhhhhccHHHHH
Q psy6924 48 IMDFFTYCCINCMHILPIPILI 69 (89)
Q Consensus 48 vv~Fwa~wC~~C~~~~p~l~~l 69 (89)
++.|+++||++|++..+.|+++
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~ 24 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA 24 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT
T ss_pred EEEEeCCCChHHHHHHHHHHHc
Confidence 5679999999999999888764
No 260
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.13 E-value=0.0002 Score=42.15 Aligned_cols=23 Identities=9% Similarity=0.218 Sum_probs=19.7
Q ss_pred EEEEeCCCChhhhhhccHHHHHH
Q psy6924 48 IMDFFTYCCINCMHILPIPILIR 70 (89)
Q Consensus 48 vv~Fwa~wC~~C~~~~p~l~~l~ 70 (89)
++.||++|||+|++..+.|++..
T Consensus 24 v~ly~~~~Cp~C~~ak~~L~~~~ 46 (103)
T 3nzn_A 24 VIMYGLSTCVWCKKTKKLLTDLG 46 (103)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHT
T ss_pred EEEEcCCCCchHHHHHHHHHHcC
Confidence 44599999999999999988764
No 261
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=97.13 E-value=0.0012 Score=44.40 Aligned_cols=37 Identities=14% Similarity=0.225 Sum_probs=31.5
Q ss_pred ccCCCCEEEEEEeCCCChhhhhhccH-HHHHHHHhCcC
Q psy6924 40 SHLKNKIVIMDFFTYCCINCMHILPI-PILIRHILEYK 76 (89)
Q Consensus 40 ~~~~gk~vvv~Fwa~wC~~C~~~~p~-l~~l~~~~~~~ 76 (89)
.+..++++|+.|+...||.|+++.+. +.++.++|.+.
T Consensus 35 G~~~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~ 72 (226)
T 3f4s_A 35 GDPKAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDT 72 (226)
T ss_dssp SCTTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTT
T ss_pred CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccC
Confidence 56678999999999999999999986 57888888543
No 262
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.08 E-value=0.00017 Score=43.22 Aligned_cols=24 Identities=25% Similarity=0.396 Sum_probs=20.0
Q ss_pred EEEEEeCCCChhhhhhccHHHHHH
Q psy6924 47 VIMDFFTYCCINCMHILPIPILIR 70 (89)
Q Consensus 47 vvv~Fwa~wC~~C~~~~p~l~~l~ 70 (89)
.|+.|+++||++|++..+.|+++.
T Consensus 20 ~vv~f~~~~Cp~C~~~~~~L~~~~ 43 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNALDILNKFS 43 (114)
T ss_dssp CEEEEECTTCHHHHHHHHHHTTSC
T ss_pred CEEEEEeCCChhHHHHHHHHHHcC
Confidence 456799999999999998887653
No 263
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.06 E-value=0.00027 Score=42.09 Aligned_cols=22 Identities=9% Similarity=0.283 Sum_probs=19.0
Q ss_pred EEEEeCCCChhhhhhccHHHHH
Q psy6924 48 IMDFFTYCCINCMHILPIPILI 69 (89)
Q Consensus 48 vv~Fwa~wC~~C~~~~p~l~~l 69 (89)
|+.|+++|||+|++..+.|+++
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~ 42 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRL 42 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT
T ss_pred EEEEECCCChhHHHHHHHHHHc
Confidence 4569999999999999888875
No 264
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.06 E-value=0.0003 Score=43.31 Aligned_cols=24 Identities=17% Similarity=0.285 Sum_probs=19.8
Q ss_pred EEEEEEeCCCChhhhhhccHHHHHH
Q psy6924 46 IVIMDFFTYCCINCMHILPIPILIR 70 (89)
Q Consensus 46 ~vvv~Fwa~wC~~C~~~~p~l~~l~ 70 (89)
.|+| |+++||++|++..+.|+++.
T Consensus 28 ~vvv-f~~~~Cp~C~~~~~~L~~~~ 51 (130)
T 2cq9_A 28 CVVI-FSKTSCSYCTMAKKLFHDMN 51 (130)
T ss_dssp SEEE-EECSSCSHHHHHHHHHHHHT
T ss_pred cEEE-EEcCCChHHHHHHHHHHHcC
Confidence 3444 99999999999999988863
No 265
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=97.02 E-value=0.0011 Score=42.34 Aligned_cols=38 Identities=16% Similarity=0.169 Sum_probs=29.3
Q ss_pred ccCCCCEEEEEEeCCCChhhhhhccHH-HHHHHHhCcCC
Q psy6924 40 SHLKNKIVIMDFFTYCCINCMHILPIP-ILIRHILEYKR 77 (89)
Q Consensus 40 ~~~~gk~vvv~Fwa~wC~~C~~~~p~l-~~l~~~~~~~~ 77 (89)
.+..++++|+.|+.+.||.|....+.+ .++.++|.+.+
T Consensus 7 G~~~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~ 45 (186)
T 3bci_A 7 SSKNGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNH 45 (186)
T ss_dssp ----CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTT
T ss_pred CCCCCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCC
Confidence 344678899999999999999999998 57878887533
No 266
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.01 E-value=0.00039 Score=43.92 Aligned_cols=24 Identities=17% Similarity=0.285 Sum_probs=19.9
Q ss_pred EEEEEEeCCCChhhhhhccHHHHHH
Q psy6924 46 IVIMDFFTYCCINCMHILPIPILIR 70 (89)
Q Consensus 46 ~vvv~Fwa~wC~~C~~~~p~l~~l~ 70 (89)
.|+| |+++||++|++..+.|+++.
T Consensus 50 ~Vvv-f~~~~Cp~C~~~k~~L~~~~ 73 (146)
T 2ht9_A 50 CVVI-FSKTSCSYCTMAKKLFHDMN 73 (146)
T ss_dssp SEEE-EECTTCHHHHHHHHHHHHHT
T ss_pred CEEE-EECCCChhHHHHHHHHHHcC
Confidence 3444 99999999999999988763
No 267
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=96.88 E-value=0.0022 Score=42.45 Aligned_cols=35 Identities=17% Similarity=0.296 Sum_probs=29.2
Q ss_pred ccCCCCEEEEEEeCCCChhhhhhccHHHHHHH-HhC
Q psy6924 40 SHLKNKIVIMDFFTYCCINCMHILPIPILIRH-ILE 74 (89)
Q Consensus 40 ~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~-~~~ 74 (89)
.+..++++|+.|....||.|++..+.+.+..+ +|-
T Consensus 11 G~~~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i 46 (205)
T 3gmf_A 11 GNPAAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMV 46 (205)
T ss_dssp SCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhc
Confidence 56678999999999999999999987765544 783
No 268
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=96.86 E-value=0.00049 Score=39.13 Aligned_cols=22 Identities=14% Similarity=0.113 Sum_probs=19.1
Q ss_pred EEEEeCCCChhhhhhccHHHHH
Q psy6924 48 IMDFFTYCCINCMHILPIPILI 69 (89)
Q Consensus 48 vv~Fwa~wC~~C~~~~p~l~~l 69 (89)
++.|+++||++|++..+.|++.
T Consensus 8 v~~y~~~~C~~C~~~~~~L~~~ 29 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLDKK 29 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHHc
Confidence 5679999999999998888775
No 269
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=96.74 E-value=0.00048 Score=41.72 Aligned_cols=22 Identities=14% Similarity=0.085 Sum_probs=17.4
Q ss_pred EEEEeCCCChhhhhh-ccHHHHH
Q psy6924 48 IMDFFTYCCINCMHI-LPIPILI 69 (89)
Q Consensus 48 vv~Fwa~wC~~C~~~-~p~l~~l 69 (89)
|+.|+++||++|++. .+.|+++
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~ 49 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKL 49 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTS
T ss_pred EEEEEcCCCcCHHHHHHHHHHHc
Confidence 445999999999998 7766554
No 270
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=96.70 E-value=0.0011 Score=36.62 Aligned_cols=22 Identities=9% Similarity=0.113 Sum_probs=18.7
Q ss_pred EEEEeCCCChhhhhhccHHHHH
Q psy6924 48 IMDFFTYCCINCMHILPIPILI 69 (89)
Q Consensus 48 vv~Fwa~wC~~C~~~~p~l~~l 69 (89)
++.|+++||++|++..+.+++.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~ 24 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK 24 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHHC
Confidence 4568999999999998888764
No 271
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=96.68 E-value=0.0011 Score=39.03 Aligned_cols=24 Identities=21% Similarity=0.173 Sum_probs=20.0
Q ss_pred EEEEEeCCCChhhhhhccHHHHHH
Q psy6924 47 VIMDFFTYCCINCMHILPIPILIR 70 (89)
Q Consensus 47 vvv~Fwa~wC~~C~~~~p~l~~l~ 70 (89)
-|+.|+++||++|++....|++..
T Consensus 17 ~v~vy~~~~Cp~C~~ak~~L~~~~ 40 (99)
T 3qmx_A 17 KIEIYTWSTCPFCMRALALLKRKG 40 (99)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHHT
T ss_pred CEEEEEcCCChhHHHHHHHHHHCC
Confidence 444699999999999999988763
No 272
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=96.65 E-value=0.001 Score=39.20 Aligned_cols=24 Identities=25% Similarity=0.247 Sum_probs=18.8
Q ss_pred CEEEEEEeC-----CCChhhhhhccHHHHH
Q psy6924 45 KIVIMDFFT-----YCCINCMHILPIPILI 69 (89)
Q Consensus 45 k~vvv~Fwa-----~wC~~C~~~~p~l~~l 69 (89)
+.|+| |+. +||++|++..+.|+++
T Consensus 17 ~~vvv-f~~g~~~~~~C~~C~~~~~~L~~~ 45 (105)
T 2yan_A 17 ASVML-FMKGNKQEAKCGFSKQILEILNST 45 (105)
T ss_dssp SSEEE-EESBCSSSBCTTHHHHHHHHHHHH
T ss_pred CCEEE-EEecCCCCCCCccHHHHHHHHHHC
Confidence 34555 666 9999999999888775
No 273
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=96.52 E-value=0.0016 Score=37.03 Aligned_cols=22 Identities=9% Similarity=0.170 Sum_probs=18.6
Q ss_pred EEEEeCCCChhhhhhccHHHHH
Q psy6924 48 IMDFFTYCCINCMHILPIPILI 69 (89)
Q Consensus 48 vv~Fwa~wC~~C~~~~p~l~~l 69 (89)
++.|+++||++|++..+.|++.
T Consensus 8 v~ly~~~~C~~C~~~~~~L~~~ 29 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALLARK 29 (92)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT
T ss_pred EEEEECCCChhHHHHHHHHHHc
Confidence 5679999999999988887764
No 274
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=96.49 E-value=0.0013 Score=37.40 Aligned_cols=23 Identities=13% Similarity=0.197 Sum_probs=19.4
Q ss_pred EEEEeCCCChhhhhhccHHHHHH
Q psy6924 48 IMDFFTYCCINCMHILPIPILIR 70 (89)
Q Consensus 48 vv~Fwa~wC~~C~~~~p~l~~l~ 70 (89)
++.|+++||++|++..+.|+++.
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~g 36 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREG 36 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHHcC
Confidence 55699999999999988888763
No 275
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=96.37 E-value=0.0018 Score=36.18 Aligned_cols=23 Identities=9% Similarity=-0.022 Sum_probs=19.0
Q ss_pred EEEEEeCCCChhhhhhccHHHHH
Q psy6924 47 VIMDFFTYCCINCMHILPIPILI 69 (89)
Q Consensus 47 vvv~Fwa~wC~~C~~~~p~l~~l 69 (89)
.++.|+++||++|++....|++.
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~ 27 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEEN 27 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT
T ss_pred EEEEEEcCCChhHHHHHHHHHHc
Confidence 36679999999999988877664
No 276
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=96.12 E-value=0.0028 Score=37.92 Aligned_cols=20 Identities=10% Similarity=0.114 Sum_probs=17.6
Q ss_pred EEeCCCChhhhhhccHHHHH
Q psy6924 50 DFFTYCCINCMHILPIPILI 69 (89)
Q Consensus 50 ~Fwa~wC~~C~~~~p~l~~l 69 (89)
.|+.+|||+|++..+.|+++
T Consensus 21 vy~~~~Cp~C~~ak~~L~~~ 40 (114)
T 3h8q_A 21 IFSKSYCPHSTRVKELFSSL 40 (114)
T ss_dssp EEECTTCHHHHHHHHHHHHT
T ss_pred EEEcCCCCcHHHHHHHHHHc
Confidence 39999999999998888775
No 277
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=96.08 E-value=0.004 Score=43.46 Aligned_cols=31 Identities=10% Similarity=-0.005 Sum_probs=26.9
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHH
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHI 72 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~ 72 (89)
-.|+.+|+.|+.+.||+|++..+.++++.+.
T Consensus 145 ~~gk~~I~vFtDp~CPYCkkl~~~l~~~l~~ 175 (273)
T 3tdg_A 145 ANKDKILYIVSDPMCPHCQKELTKLRDHLKE 175 (273)
T ss_dssp GGTTCEEEEEECTTCHHHHHHHHTHHHHHHH
T ss_pred CCCCeEEEEEECcCChhHHHHHHHHHHHhhC
Confidence 3588999999999999999999999976553
No 278
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=95.71 E-value=0.0037 Score=38.45 Aligned_cols=22 Identities=9% Similarity=0.096 Sum_probs=17.7
Q ss_pred EEEEeCCCChhhhhh-ccHHHHH
Q psy6924 48 IMDFFTYCCINCMHI-LPIPILI 69 (89)
Q Consensus 48 vv~Fwa~wC~~C~~~-~p~l~~l 69 (89)
|+.|+.+|||+|++. .+.|+++
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L~~~ 61 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLFQEL 61 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTS
T ss_pred EEEEECCCCCchHHHHHHHHHhc
Confidence 457899999999988 7666654
No 279
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=95.44 E-value=0.0075 Score=35.27 Aligned_cols=21 Identities=14% Similarity=0.276 Sum_probs=17.1
Q ss_pred EEEEeCCCChhhhhhccHHHH
Q psy6924 48 IMDFFTYCCINCMHILPIPIL 68 (89)
Q Consensus 48 vv~Fwa~wC~~C~~~~p~l~~ 68 (89)
|+.|+.+|||+|++....|++
T Consensus 6 I~vYs~~~Cp~C~~aK~~L~~ 26 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTALTA 26 (92)
T ss_dssp EEEEECTTCSSHHHHHHHHHH
T ss_pred EEEEcCCCCHhHHHHHHHHHh
Confidence 556999999999987776655
No 280
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=95.24 E-value=0.0084 Score=35.45 Aligned_cols=26 Identities=19% Similarity=0.034 Sum_probs=18.5
Q ss_pred CCEEEEEEeC----CCChhhhhhccHHHHH
Q psy6924 44 NKIVIMDFFT----YCCINCMHILPIPILI 69 (89)
Q Consensus 44 gk~vvv~Fwa----~wC~~C~~~~p~l~~l 69 (89)
...|+|+..+ +||++|++....|++.
T Consensus 14 ~~~vvvy~~g~~~~~~Cp~C~~ak~~L~~~ 43 (109)
T 1wik_A 14 KASVMLFMKGNKQEAKCGFSKQILEILNST 43 (109)
T ss_dssp TSSEEEEESSTTTCCCSSTHHHHHHHHHHT
T ss_pred cCCEEEEEecCCCCCCCchHHHHHHHHHHc
Confidence 3345554443 9999999988888764
No 281
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=94.29 E-value=0.028 Score=34.62 Aligned_cols=22 Identities=14% Similarity=0.036 Sum_probs=18.5
Q ss_pred EEEEeCCCChhhhhhccHHHHH
Q psy6924 48 IMDFFTYCCINCMHILPIPILI 69 (89)
Q Consensus 48 vv~Fwa~wC~~C~~~~p~l~~l 69 (89)
|+.|..+|||.|++....|++.
T Consensus 16 Vvvysk~~Cp~C~~ak~lL~~~ 37 (127)
T 3l4n_A 16 IIIFSKSTCSYSKGMKELLENE 37 (127)
T ss_dssp EEEEECTTCHHHHHHHHHHHHH
T ss_pred EEEEEcCCCccHHHHHHHHHHh
Confidence 5578899999999998888773
No 282
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=92.26 E-value=0.1 Score=29.19 Aligned_cols=22 Identities=9% Similarity=0.013 Sum_probs=17.5
Q ss_pred EEEEeCC----CChhhhhhccHHHHH
Q psy6924 48 IMDFFTY----CCINCMHILPIPILI 69 (89)
Q Consensus 48 vv~Fwa~----wC~~C~~~~p~l~~l 69 (89)
|+-|+.+ ||+.|++....|++.
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~ 27 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK 27 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc
Confidence 3457889 999999988777663
No 283
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=92.15 E-value=0.32 Score=31.34 Aligned_cols=31 Identities=16% Similarity=0.139 Sum_probs=27.4
Q ss_pred EEEEEEeCCCChhhhhhccHHHHHHHHhCcC
Q psy6924 46 IVIMDFFTYCCINCMHILPIPILIRHILEYK 76 (89)
Q Consensus 46 ~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~ 76 (89)
..|..|+..-||.|-...+.|+++.++++++
T Consensus 3 ~~I~~~~D~~CP~cy~~~~~l~~l~~~~~~~ 33 (208)
T 3kzq_A 3 IKLYYVHDPMCSWCWGYKPTIEKLKQQLPGV 33 (208)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHSCTT
T ss_pred eEEEEEECCCCchhhhhhHHHHHHHHhCCCC
Confidence 4677899999999999999999999999753
No 284
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=91.77 E-value=0.052 Score=33.74 Aligned_cols=25 Identities=4% Similarity=-0.032 Sum_probs=18.1
Q ss_pred CEEEEEEeC----CCChhhhhhccHHHHH
Q psy6924 45 KIVIMDFFT----YCCINCMHILPIPILI 69 (89)
Q Consensus 45 k~vvv~Fwa----~wC~~C~~~~p~l~~l 69 (89)
..|+|+.++ +||+.|++....|++.
T Consensus 35 ~~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~ 63 (135)
T 2wci_A 35 NPILLYMKGSPKLPSCGFSAQAVQALAAC 63 (135)
T ss_dssp CSEEEEESBCSSSBSSHHHHHHHHHHHTT
T ss_pred CCEEEEEEecCCCCCCccHHHHHHHHHHc
Confidence 346666665 8999999887777653
No 285
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=91.75 E-value=0.27 Score=29.84 Aligned_cols=30 Identities=17% Similarity=0.273 Sum_probs=24.2
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
.++++||-|+++||++| .+.+.++++.+.+
T Consensus 38 ~~~v~VVGfF~~~~~~~---~~~F~~~A~~~~d 67 (124)
T 2l4c_A 38 ATEVAVIGFFQDLEIPA---VPILHSMVQKFPG 67 (124)
T ss_dssp TSSEEEEEECSCTTSTH---HHHHHHHHHHCTT
T ss_pred cCCCEEEEEECCCCChh---HHHHHHHHHhCCC
Confidence 47899999999999988 4567888887733
No 286
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=91.47 E-value=0.18 Score=35.00 Aligned_cols=29 Identities=17% Similarity=0.040 Sum_probs=25.2
Q ss_pred CEEEEEEeCCCChhhhhhccHHHHHHHHh
Q psy6924 45 KIVIMDFFTYCCINCMHILPIPILIRHIL 73 (89)
Q Consensus 45 k~vvv~Fwa~wC~~C~~~~p~l~~l~~~~ 73 (89)
++.|..|+.++|+.|.+....|+++..++
T Consensus 43 ~~~VelyTs~gCp~C~~Ak~lL~~~~~~~ 71 (270)
T 2axo_A 43 KGVVELFTSQGCASCPPADEALRKMIQKG 71 (270)
T ss_dssp CCEEEEEECTTCTTCHHHHHHHHHHHHHT
T ss_pred CcEEEEEeCCCCCChHHHHHHHHHhhccC
Confidence 36788899999999999999999987764
No 287
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=91.28 E-value=0.41 Score=31.27 Aligned_cols=32 Identities=6% Similarity=-0.027 Sum_probs=27.3
Q ss_pred CEEEEEEeCCCChhhhhhccHHHHHHHHhCcC
Q psy6924 45 KIVIMDFFTYCCINCMHILPIPILIRHILEYK 76 (89)
Q Consensus 45 k~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~ 76 (89)
+.+++.|...||+.|....+.+++++++|+++
T Consensus 132 ~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~ 163 (227)
T 4f9z_D 132 QIHLLLIMNKASPEYEENMHRYQKAAKLFQGK 163 (227)
T ss_dssp CEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT
T ss_pred ceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC
Confidence 44556677889999999999999999999986
No 288
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=90.59 E-value=0.15 Score=30.26 Aligned_cols=26 Identities=12% Similarity=0.028 Sum_probs=18.7
Q ss_pred CCCEEEEEEeC-----CCChhhhhhccHHHHH
Q psy6924 43 KNKIVIMDFFT-----YCCINCMHILPIPILI 69 (89)
Q Consensus 43 ~gk~vvv~Fwa-----~wC~~C~~~~p~l~~l 69 (89)
+.++|+ -|.. +|||.|++....|++.
T Consensus 14 ~~~~Vv-lf~kg~~~~~~Cp~C~~ak~~L~~~ 44 (111)
T 3zyw_A 14 HAAPCM-LFMKGTPQEPRCGFSKQMVEILHKH 44 (111)
T ss_dssp TSSSEE-EEESBCSSSBSSHHHHHHHHHHHHT
T ss_pred hcCCEE-EEEecCCCCCcchhHHHHHHHHHHc
Confidence 444555 4566 9999999988777753
No 289
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=90.28 E-value=0.59 Score=29.86 Aligned_cols=29 Identities=24% Similarity=0.258 Sum_probs=24.2
Q ss_pred CEEEEEEeCCCChhhhhhccHHHHHHHHh
Q psy6924 45 KIVIMDFFTYCCINCMHILPIPILIRHIL 73 (89)
Q Consensus 45 k~vvv~Fwa~wC~~C~~~~p~l~~l~~~~ 73 (89)
++.|..|+...||.|....+.++++.+.+
T Consensus 7 ~~~I~~f~D~~CP~C~~~~~~~~~l~~~~ 35 (216)
T 2in3_A 7 KPVLWYIADPMCSWCWGFAPVIENIRQEY 35 (216)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEEECCCCchhhcchHHHHHHHhcC
Confidence 35677899999999998889999988743
No 290
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=88.22 E-value=0.32 Score=31.93 Aligned_cols=24 Identities=17% Similarity=0.019 Sum_probs=19.1
Q ss_pred EEEEEEeCCCChhhhhhccHHHHH
Q psy6924 46 IVIMDFFTYCCINCMHILPIPILI 69 (89)
Q Consensus 46 ~vvv~Fwa~wC~~C~~~~p~l~~l 69 (89)
..++.|+.+||+.|++....|++.
T Consensus 170 ~~i~ly~~~~Cp~C~~a~~~L~~~ 193 (241)
T 1nm3_A 170 ESISIFTKPGCPFCAKAKQLLHDK 193 (241)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHH
T ss_pred ceEEEEECCCChHHHHHHHHHHHc
Confidence 345668899999999988887764
No 291
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=87.66 E-value=0.3 Score=27.62 Aligned_cols=21 Identities=10% Similarity=-0.184 Sum_probs=14.7
Q ss_pred EEEEeCCCChhh------hhhccHHHH
Q psy6924 48 IMDFFTYCCINC------MHILPIPIL 68 (89)
Q Consensus 48 vv~Fwa~wC~~C------~~~~p~l~~ 68 (89)
|+-|+.++|+.| ++....|++
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~ 30 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDG 30 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHH
Confidence 445789999999 665555443
No 292
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=87.14 E-value=0.39 Score=28.89 Aligned_cols=27 Identities=7% Similarity=-0.140 Sum_probs=18.8
Q ss_pred CCCEEEEEEeC----CCChhhhhhccHHHHH
Q psy6924 43 KNKIVIMDFFT----YCCINCMHILPIPILI 69 (89)
Q Consensus 43 ~gk~vvv~Fwa----~wC~~C~~~~p~l~~l 69 (89)
+.+.|+|+--+ +|||.|++....|++.
T Consensus 14 ~~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~ 44 (121)
T 3gx8_A 14 ESAPVVLFMKGTPEFPKCGFSRATIGLLGNQ 44 (121)
T ss_dssp HSCSEEEEESBCSSSBCTTHHHHHHHHHHHH
T ss_pred ccCCEEEEEeccCCCCCCccHHHHHHHHHHc
Confidence 34445544444 4999999998888775
No 293
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=86.59 E-value=0.34 Score=29.17 Aligned_cols=27 Identities=19% Similarity=0.063 Sum_probs=18.3
Q ss_pred CCCEEEEEEeC----CCChhhhhhccHHHHH
Q psy6924 43 KNKIVIMDFFT----YCCINCMHILPIPILI 69 (89)
Q Consensus 43 ~gk~vvv~Fwa----~wC~~C~~~~p~l~~l 69 (89)
+.+.|+|+--+ +|||+|++....|++.
T Consensus 18 ~~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~ 48 (118)
T 2wem_A 18 KKDKVVVFLKGTPEQPQCGFSNAVVQILRLH 48 (118)
T ss_dssp HHSSEEEEESBCSSSBSSHHHHHHHHHHHHT
T ss_pred ccCCEEEEEecCCCCCccHHHHHHHHHHHHc
Confidence 34455554443 4999999988887764
No 294
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=86.58 E-value=0.42 Score=28.03 Aligned_cols=27 Identities=11% Similarity=0.056 Sum_probs=18.4
Q ss_pred CCCEEEEEEeC----CCChhhhhhccHHHHH
Q psy6924 43 KNKIVIMDFFT----YCCINCMHILPIPILI 69 (89)
Q Consensus 43 ~gk~vvv~Fwa----~wC~~C~~~~p~l~~l 69 (89)
+.+.|+|+-.+ +|||.|++....|++.
T Consensus 16 ~~~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~ 46 (109)
T 3ipz_A 16 NSEKVVLFMKGTRDFPMCGFSNTVVQILKNL 46 (109)
T ss_dssp TSSSEEEEESBCSSSBSSHHHHHHHHHHHHT
T ss_pred ccCCEEEEEecCCCCCCChhHHHHHHHHHHc
Confidence 44455554444 4999999988777764
No 295
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.98 E-value=0.41 Score=28.22 Aligned_cols=21 Identities=10% Similarity=-0.042 Sum_probs=14.9
Q ss_pred EEEEeCCCChhhh------hhccHHHH
Q psy6924 48 IMDFFTYCCINCM------HILPIPIL 68 (89)
Q Consensus 48 vv~Fwa~wC~~C~------~~~p~l~~ 68 (89)
|+.|..++|+.|+ +....|++
T Consensus 10 V~vy~~~~C~~C~~~~~~~~ak~~L~~ 36 (111)
T 2ct6_A 10 IRVFIASSSGFVAIKKKQQDVVRFLEA 36 (111)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCcccchhHHHHHHHHHH
Confidence 4467899999999 55555443
No 296
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=85.34 E-value=0.59 Score=27.71 Aligned_cols=21 Identities=5% Similarity=-0.195 Sum_probs=16.9
Q ss_pred EEEEeCCCChhhhhhccHHHH
Q psy6924 48 IMDFFTYCCINCMHILPIPIL 68 (89)
Q Consensus 48 vv~Fwa~wC~~C~~~~p~l~~ 68 (89)
+.-|..++|+.|++....|++
T Consensus 2 i~iY~~~~C~~C~kak~~L~~ 22 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDE 22 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 345788999999998877765
No 297
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=84.38 E-value=0.69 Score=28.12 Aligned_cols=21 Identities=10% Similarity=0.157 Sum_probs=17.3
Q ss_pred EEEEeCCCChhhhhhccHHHH
Q psy6924 48 IMDFFTYCCINCMHILPIPIL 68 (89)
Q Consensus 48 vv~Fwa~wC~~C~~~~p~l~~ 68 (89)
+.-|+.++|+.|++....|++
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~ 23 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEE 23 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHH
Confidence 446789999999998877776
No 298
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.22 E-value=0.75 Score=29.66 Aligned_cols=23 Identities=4% Similarity=-0.065 Sum_probs=19.8
Q ss_pred cCCCCEEEEEEeCCCChhhhhhc
Q psy6924 41 HLKNKIVIMDFFTYCCINCMHIL 63 (89)
Q Consensus 41 ~~~gk~vvv~Fwa~wC~~C~~~~ 63 (89)
.-++|+++|++.++||..|..+.
T Consensus 52 k~e~K~LlVyLhs~~~~~~~~f~ 74 (178)
T 2ec4_A 52 ARDRKLLAIYLHHDESVLTNVFC 74 (178)
T ss_dssp TTTCCEEEEEEECSSCSHHHHHH
T ss_pred hhhCcEEEEEEeCCCCccHHHHH
Confidence 45799999999999999987654
No 299
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=84.00 E-value=0.19 Score=23.25 Aligned_cols=21 Identities=19% Similarity=0.314 Sum_probs=18.4
Q ss_pred CChhhhhhccHHHHHHHHhCc
Q psy6924 55 CCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 55 wC~~C~~~~p~l~~l~~~~~~ 75 (89)
-|+-|+..+|.++.+..+|.+
T Consensus 5 ~CpvCk~q~Pd~kt~~~H~e~ 25 (28)
T 2jvx_A 5 CCPKCQYQAPDMDTLQIHVME 25 (28)
T ss_dssp ECTTSSCEESSHHHHHHHHHH
T ss_pred cCccccccCcChHHHHHHHHH
Confidence 499999999999999888754
No 300
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=82.26 E-value=0.93 Score=27.05 Aligned_cols=22 Identities=5% Similarity=-0.269 Sum_probs=17.4
Q ss_pred EEEEeCCCChhhhhhccHHHHH
Q psy6924 48 IMDFFTYCCINCMHILPIPILI 69 (89)
Q Consensus 48 vv~Fwa~wC~~C~~~~p~l~~l 69 (89)
+.-|..++|+.|++....|++.
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~~ 28 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLEDH 28 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHc
Confidence 4457889999999988777763
No 301
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=79.77 E-value=1.3 Score=26.54 Aligned_cols=21 Identities=14% Similarity=0.262 Sum_probs=17.1
Q ss_pred EEEEeCCCChhhhhhccHHHH
Q psy6924 48 IMDFFTYCCINCMHILPIPIL 68 (89)
Q Consensus 48 vv~Fwa~wC~~C~~~~p~l~~ 68 (89)
+.-|..++|+.|++....|++
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~ 22 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNR 22 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHH
Confidence 446788999999998877765
No 302
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=79.69 E-value=0.32 Score=30.02 Aligned_cols=34 Identities=15% Similarity=0.164 Sum_probs=28.0
Q ss_pred CEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCe
Q psy6924 45 KIVIMDFFTYCCINCMHILPIPILIRHILEYKRT 78 (89)
Q Consensus 45 k~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~ 78 (89)
|.+++-|--+-|+-|+.....+.++..+|.=.++
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~ledeY~ilrV 35 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEELKSEYDILHV 35 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHTTTTTEEEEEE
T ss_pred CceEEEeCCCccHHHHHHHHHHHHhhccccEEEE
Confidence 5789999999999999999889888777754333
No 303
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=79.30 E-value=2.1 Score=27.22 Aligned_cols=28 Identities=4% Similarity=-0.081 Sum_probs=24.8
Q ss_pred EEEEEeCCCChhhhhhccHHHHHHHHhC
Q psy6924 47 VIMDFFTYCCINCMHILPIPILIRHILE 74 (89)
Q Consensus 47 vvv~Fwa~wC~~C~~~~p~l~~l~~~~~ 74 (89)
.|..|+..-||.|....+.|+++.++++
T Consensus 2 ~I~~~~D~~CP~cy~~~~~l~~~~~~~~ 29 (203)
T 2imf_A 2 IVDFYFDFLSPFSYLANQRLSKLAQDYG 29 (203)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHC
T ss_pred eEEEEEeCCCHHHHHHHHHHHHHHHHcC
Confidence 3667889999999999999999999985
No 304
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=78.98 E-value=3.5 Score=28.38 Aligned_cols=31 Identities=16% Similarity=-0.002 Sum_probs=26.5
Q ss_pred CEEEEEEeCCCChhhhhhccHHHHHHHHhCc
Q psy6924 45 KIVIMDFFTYCCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 45 k~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~ 75 (89)
+..++.|...+|+.|....+.++++++++++
T Consensus 246 ~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~ 276 (350)
T 1sji_A 246 GIHIVAFAERSDPDGYEFLEILKQVARDNTD 276 (350)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHHHHHHHGGG
T ss_pred CcEEEEEEcCCCccHHHHHHHHHHHHHHhCC
Confidence 4455569999999999999999999999985
No 305
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=76.28 E-value=1.6 Score=32.45 Aligned_cols=22 Identities=14% Similarity=0.280 Sum_probs=18.0
Q ss_pred EEEEeCCCChhhhhhccHHHHH
Q psy6924 48 IMDFFTYCCINCMHILPIPILI 69 (89)
Q Consensus 48 vv~Fwa~wC~~C~~~~p~l~~l 69 (89)
++.|..+|||.|++....|++.
T Consensus 20 v~vy~~~~Cp~C~~~k~~L~~~ 41 (598)
T 2x8g_A 20 VILFSKTTCPYCKKVKDVLAEA 41 (598)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT
T ss_pred EEEEECCCChhHHHHHHHHHHC
Confidence 4568999999999888877764
No 306
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=75.41 E-value=2 Score=25.73 Aligned_cols=21 Identities=10% Similarity=-0.056 Sum_probs=17.2
Q ss_pred EEEEeCCCChhhhhhccHHHH
Q psy6924 48 IMDFFTYCCINCMHILPIPIL 68 (89)
Q Consensus 48 vv~Fwa~wC~~C~~~~p~l~~ 68 (89)
+.-|..++|+.|++....|++
T Consensus 5 i~iY~~~~C~~c~ka~~~L~~ 25 (120)
T 3fz4_A 5 LTFYEYPKCSTCRRAKAELDD 25 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHH
Confidence 445788999999998887765
No 307
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=74.04 E-value=5.4 Score=27.85 Aligned_cols=32 Identities=16% Similarity=0.002 Sum_probs=28.1
Q ss_pred CEEEEEEeCCCChhhhhhccHHHHHHHHhCcC
Q psy6924 45 KIVIMDFFTYCCINCMHILPIPILIRHILEYK 76 (89)
Q Consensus 45 k~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~ 76 (89)
++.++.|...+++.+......+++++++|+++
T Consensus 248 ~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~ 279 (367)
T 3us3_A 248 GIHIVAFAEEADPDGYEFLEILKSVAQDNTDN 279 (367)
T ss_dssp TEEEEEECCTTSHHHHHHHHHHHHHHHHTTTC
T ss_pred CcEEEEEEcCCChhHHHHHHHHHHHHHHcCCC
Confidence 46667799999999999999999999999985
No 308
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=72.12 E-value=2.1 Score=25.67 Aligned_cols=21 Identities=14% Similarity=0.121 Sum_probs=17.0
Q ss_pred EEEEeCCCChhhhhhccHHHH
Q psy6924 48 IMDFFTYCCINCMHILPIPIL 68 (89)
Q Consensus 48 vv~Fwa~wC~~C~~~~p~l~~ 68 (89)
+.-|..++|+.|++....|++
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~ 26 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIE 26 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 445789999999998877765
No 309
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=71.87 E-value=4 Score=26.43 Aligned_cols=28 Identities=11% Similarity=0.050 Sum_probs=24.1
Q ss_pred EEEEEEeCCCChhhhhhccHHHHHHHHh
Q psy6924 46 IVIMDFFTYCCINCMHILPIPILIRHIL 73 (89)
Q Consensus 46 ~vvv~Fwa~wC~~C~~~~p~l~~l~~~~ 73 (89)
+.|..|+..-||.|....+.|+++.+++
T Consensus 6 ~~I~~~~D~~CP~Cy~~~~~l~~l~~~~ 33 (226)
T 1r4w_A 6 RVLELFYDVLSPYSWLGFEVLCRYQHLW 33 (226)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHTTTS
T ss_pred ceEEEEEeCCChHHHHHHHHHHHHHHHc
Confidence 5677888999999999999999987665
No 310
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=67.89 E-value=2.6 Score=26.04 Aligned_cols=20 Identities=5% Similarity=-0.137 Sum_probs=16.4
Q ss_pred EEEeCCCChhhhhhccHHHH
Q psy6924 49 MDFFTYCCINCMHILPIPIL 68 (89)
Q Consensus 49 v~Fwa~wC~~C~~~~p~l~~ 68 (89)
.-|..++|+.|++....|++
T Consensus 5 tiY~~p~C~~crkak~~L~~ 24 (141)
T 1s3c_A 5 TIYHNPASGTSRNTLEMIRN 24 (141)
T ss_dssp EEECCTTCHHHHHHHHHHHH
T ss_pred EEEECCCChHHHHHHHHHHH
Confidence 35778999999998877765
No 311
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=67.43 E-value=3.7 Score=26.54 Aligned_cols=29 Identities=14% Similarity=0.293 Sum_probs=23.9
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhC
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILE 74 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~ 74 (89)
.++++||.|+++|| ....+.+.++++.++
T Consensus 26 ~~~v~vVgff~~~~---~~~~~~f~~~A~~l~ 54 (227)
T 4f9z_D 26 ATEVAVIGFFQDLE---IPAVPILHSMVQKFP 54 (227)
T ss_dssp TSSEEEEEECSCSC---STHHHHHHHHTTTCT
T ss_pred cCCeEEEEEecCCC---chhHHHHHHHHHhCC
Confidence 46899999999995 577888888888774
No 312
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=66.30 E-value=2 Score=30.90 Aligned_cols=17 Identities=18% Similarity=0.063 Sum_probs=13.0
Q ss_pred EEEEeCCCChhhhhhcc
Q psy6924 48 IMDFFTYCCINCMHILP 64 (89)
Q Consensus 48 vv~Fwa~wC~~C~~~~p 64 (89)
|+.|..+|||.|++...
T Consensus 263 VvVYsk~~CPyC~~Ak~ 279 (362)
T 2jad_A 263 IFVASKTYCPYSHAALN 279 (362)
T ss_dssp EEEEECTTCHHHHHHHH
T ss_pred EEEEEcCCCcchHHHHH
Confidence 33578899999987653
No 313
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=65.77 E-value=1.9 Score=20.71 Aligned_cols=21 Identities=24% Similarity=0.268 Sum_probs=17.2
Q ss_pred CChhhhhhccHHHHHHHHhCc
Q psy6924 55 CCINCMHILPIPILIRHILEY 75 (89)
Q Consensus 55 wC~~C~~~~p~l~~l~~~~~~ 75 (89)
-||.|+......++|.++|..
T Consensus 7 iCP~C~~~l~s~~~L~~Hye~ 27 (34)
T 3mjh_B 7 ICPQCMKSLGSADELFKHYEA 27 (34)
T ss_dssp ECTTTCCEESSHHHHHHHHHH
T ss_pred CCcHHHHHcCCHHHHHHHHHh
Confidence 399999999988888877753
No 314
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=65.75 E-value=3 Score=25.39 Aligned_cols=14 Identities=14% Similarity=0.074 Sum_probs=11.1
Q ss_pred EEEEEeCCCChhhh
Q psy6924 47 VIMDFFTYCCINCM 60 (89)
Q Consensus 47 vvv~Fwa~wC~~C~ 60 (89)
||..|.++.||.|.
T Consensus 1 ~V~vYtt~~c~~c~ 14 (121)
T 1u6t_A 1 VIRVYIASSSGSTA 14 (121)
T ss_dssp CEEEEECTTCSCHH
T ss_pred CEEEEecCCCCCcc
Confidence 45677899999993
No 315
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=64.45 E-value=2.6 Score=25.28 Aligned_cols=21 Identities=10% Similarity=0.138 Sum_probs=16.6
Q ss_pred EEEEeCCCChhhhhhccHHHH
Q psy6924 48 IMDFFTYCCINCMHILPIPIL 68 (89)
Q Consensus 48 vv~Fwa~wC~~C~~~~p~l~~ 68 (89)
+.-|..++|+.|++....|++
T Consensus 7 i~iY~~p~C~~c~ka~~~L~~ 27 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVEQ 27 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHHT
T ss_pred EEEEECCCCHHHHHHHHHHHH
Confidence 445788999999998877764
No 316
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=63.26 E-value=15 Score=24.14 Aligned_cols=33 Identities=6% Similarity=-0.057 Sum_probs=26.3
Q ss_pred CCEEEEEEeCCCChhhhhhccHHHHHHHHhCcC
Q psy6924 44 NKIVIMDFFTYCCINCMHILPIPILIRHILEYK 76 (89)
Q Consensus 44 gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~ 76 (89)
||..|-.|+..-||.|--..+.|+++.++++++
T Consensus 1 ~~~~I~~~~D~~cPwcyig~~~l~~a~~~~~~~ 33 (239)
T 3gl5_A 1 GHMRVEIWSDIACPWCYVGKARFEKALAAFPHR 33 (239)
T ss_dssp -CEEEEEEECSSCHHHHHHHHHHHHHHHTCTTG
T ss_pred CCeEEEEEEeCcCHhHHHHHHHHHHHHHhcCcc
Confidence 456666677779999999999999998888653
No 317
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=63.01 E-value=3.7 Score=24.49 Aligned_cols=21 Identities=10% Similarity=0.134 Sum_probs=16.7
Q ss_pred EEEEeCCCChhhhhhccHHHH
Q psy6924 48 IMDFFTYCCINCMHILPIPIL 68 (89)
Q Consensus 48 vv~Fwa~wC~~C~~~~p~l~~ 68 (89)
+.-|..++|+.|++....|++
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~ 26 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALLEN 26 (119)
T ss_dssp CEEECCTTCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 345678999999998877765
No 318
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=50.92 E-value=2.6 Score=19.01 Aligned_cols=11 Identities=27% Similarity=0.851 Sum_probs=9.4
Q ss_pred CChhhhhhccH
Q psy6924 55 CCINCMHILPI 65 (89)
Q Consensus 55 wC~~C~~~~p~ 65 (89)
.||-|++++|.
T Consensus 8 qcpvcqq~mpa 18 (29)
T 3vhs_A 8 QCPVCQQMMPA 18 (29)
T ss_dssp ECTTTCCEEEG
T ss_pred eChHHHHhCcH
Confidence 59999999885
No 319
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=46.73 E-value=13 Score=22.24 Aligned_cols=16 Identities=19% Similarity=0.029 Sum_probs=12.1
Q ss_pred CCChhhhhhccHHHHH
Q psy6924 54 YCCINCMHILPIPILI 69 (89)
Q Consensus 54 ~wC~~C~~~~p~l~~l 69 (89)
+.||.|++....|.+.
T Consensus 33 P~C~fc~~ak~lL~~~ 48 (118)
T 2wul_A 33 PQCGFSNAVVQILRLH 48 (118)
T ss_dssp BSSHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHh
Confidence 4799999887776553
No 320
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=43.88 E-value=33 Score=20.45 Aligned_cols=38 Identities=16% Similarity=0.003 Sum_probs=29.3
Q ss_pred CCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEEe
Q psy6924 42 LKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTFQ 85 (89)
Q Consensus 42 ~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~~ 85 (89)
++|.+|||++-.-- ....+..+.+.....++.++++-+
T Consensus 45 F~~aPVVlDl~~l~------~~~dl~~L~~~l~~~gl~~vGV~g 82 (120)
T 3ghf_A 45 LKHAPVVINVSGLE------SPVNWPELHKIVTSTGLRIIGVSG 82 (120)
T ss_dssp HTTCEEEEEEEECC------SSCCHHHHHHHHHTTTCEEEEEES
T ss_pred hCCCcEEEEccccC------ChHHHHHHHHHHHHcCCEEEEEeC
Confidence 58999999997553 124577888888888999998865
No 321
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=37.31 E-value=32 Score=22.34 Aligned_cols=31 Identities=13% Similarity=0.053 Sum_probs=22.8
Q ss_pred CCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcC
Q psy6924 43 KNKIVIMDFFTYCCINCMHILPIPILIRHILEYK 76 (89)
Q Consensus 43 ~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~ 76 (89)
.+++++|-|+++||. .....+.++++.++++
T Consensus 23 ~~~v~vvgff~~~~~---~~~~~f~~~A~~lr~~ 53 (252)
T 2h8l_A 23 DKDASIVGFFDDSFS---EAHSEFLKAASNLRDN 53 (252)
T ss_dssp SSSCEEEEEESCTTS---HHHHHHHHHHHHTTTT
T ss_pred cCCeEEEEEECCCCC---hHHHHHHHHHHhcccC
Confidence 356788899999854 5566788888888553
No 322
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=35.50 E-value=36 Score=18.70 Aligned_cols=41 Identities=12% Similarity=-0.031 Sum_probs=28.3
Q ss_pred C-CcccccccCCCCEEEEEEeCCCChhhhhhccHHHHH-HHHhCc
Q psy6924 33 T-EPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPILI-RHILEY 75 (89)
Q Consensus 33 g-~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l-~~~~~~ 75 (89)
| ..+.+ -+.++..|.|.+-.. |..|....-.+++. .++.++
T Consensus 24 GGGdvel-v~v~~g~V~v~l~Ga-C~gc~Tlk~gIe~~L~~~vpe 66 (74)
T 1th5_A 24 GGGGLQF-LMIKGPIVKVRLTGP-AAVVRTVRIAVSKKLREKIPS 66 (74)
T ss_dssp TCCCCCC-CEEETTEEEECCCSS-SSSSSSHHHHHHHHHHHHCTT
T ss_pred CCCcEEE-EEEeCCEEEEEEecC-CcchHHHHHHHHHHHHHHCCC
Confidence 5 77888 677788999999877 77896555445544 444544
No 323
>2ijr_A Hypothetical protein API92; structural genomics, PSI, protein structure initiative; 2.70A {Yersinia pseudotuberculosis} SCOP: e.66.1.1
Probab=31.20 E-value=17 Score=25.51 Aligned_cols=35 Identities=6% Similarity=-0.041 Sum_probs=24.1
Q ss_pred CCcccccccCCCCEEEEEEeCCCChhhhhhccHHHH
Q psy6924 33 TEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPIL 68 (89)
Q Consensus 33 g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~~ 68 (89)
|..+.. .......+-|+|=++||||.-..+..|.+
T Consensus 209 Gh~~~~-~r~g~~~L~v~FDTPW~PPs~ev~~~lS~ 243 (300)
T 2ijr_A 209 GQNIIW-QRDRINSLRLDFDSPSYPPSAELMGELSA 243 (300)
T ss_dssp CEEEEE-EEEETTEEEEEEEEESSCCCHHHHHHHHH
T ss_pred CCceeE-EeCCCCeEEEeccCCCCCChHHHHHHHhc
Confidence 334455 34456778889999999998776655443
No 324
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=30.41 E-value=43 Score=21.74 Aligned_cols=30 Identities=13% Similarity=-0.042 Sum_probs=23.4
Q ss_pred CCEEEEEEeCCCChhhhhhccHHHHHHHHhCcC
Q psy6924 44 NKIVIMDFFTYCCINCMHILPIPILIRHILEYK 76 (89)
Q Consensus 44 gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~ 76 (89)
.++++|-|++++|. ...+.+.+++++++++
T Consensus 25 ~~v~vVgff~~~~~---~~~~~F~~~A~~lr~~ 54 (250)
T 3ec3_A 25 DDVVILGVFQGVGD---PGYLQYQDAANTLRED 54 (250)
T ss_dssp SSCEEEEECSCTTC---HHHHHHHHHHHHHTTT
T ss_pred CCeEEEEEEcCCCc---hHHHHHHHHHHhhhcC
Confidence 67889999999864 6677788888887553
No 325
>2kii_A Putative uncharacterized protein; H-NOX, unknown function; HET: HEM; NMR {Shewanella oneidensis} PDB: 2kil_A*
Probab=28.59 E-value=1.1e+02 Score=19.14 Aligned_cols=38 Identities=11% Similarity=0.113 Sum_probs=29.7
Q ss_pred cCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEE
Q psy6924 41 HLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHI 80 (89)
Q Consensus 41 ~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~v 80 (89)
+..+.-..++..++++ -|.-....++.++++| +..+.|
T Consensus 122 ~~~~~~l~l~Y~S~R~-l~~~~~Gli~~~A~~f-~~~v~i 159 (181)
T 2kii_A 122 LLPNNQIALRYSSPRR-LCFCAEGLLFGAAQHF-QQKIQI 159 (181)
T ss_dssp ECSSSEEEEEEECTTC-CHHHHHHHHHHHHHHT-TCCEEE
T ss_pred ECCCCEEEEEEecCCC-hHHHHHHHHHHHHHHh-CCCeEE
Confidence 3445566788999998 9999999999999999 444433
No 326
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=27.28 E-value=90 Score=17.66 Aligned_cols=33 Identities=15% Similarity=0.186 Sum_probs=23.2
Q ss_pred CCcccccccCCCCEEEEEEeCCCChhhhhhccHHH
Q psy6924 33 TEPLSLNSHLKNKIVIMDFFTYCCINCMHILPIPI 67 (89)
Q Consensus 33 g~~~~l~~~~~gk~vvv~Fwa~wC~~C~~~~p~l~ 67 (89)
|..+.+ -+.++..|.|.+-+. |..|....-.+.
T Consensus 27 GGdvel-v~v~~g~V~V~L~Ga-C~gCpss~~TLk 59 (88)
T 1xhj_A 27 GGDCTL-VDVEDGIVKLQLHGA-CGTCPSSTITLK 59 (88)
T ss_dssp SCEEEE-EECCSSEEEEEEESS-CCSSCHHHHHHH
T ss_pred CCeEEE-EEEECCEEEEEEeec-CCCCcchHHHHH
Confidence 777888 678888999999887 445554444444
No 327
>2ei9_A Non-LTR retrotransposon R1BMKS ORF2 protein; four layered alpha beta sandwich, gene regulation; 2.00A {Bombyx mori}
Probab=25.73 E-value=1.4e+02 Score=19.23 Aligned_cols=41 Identities=12% Similarity=-0.122 Sum_probs=28.2
Q ss_pred CCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 44 NKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 44 gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
+.+.|+..|.+.-..-......++++.++..++.+++.|.|
T Consensus 88 ~~i~i~svY~P~~~~~~~~~~~l~~l~~~~~~~~~Ii~GDf 128 (240)
T 2ei9_A 88 WDLYMVSAYFQYSDPIDPYLHRLGNILDRLRGARVVICADT 128 (240)
T ss_dssp TTEEEEEEECCTTSCSHHHHHHHHHHHHHTTTSCEEEEEEC
T ss_pred ccEEEEEEEcCCCCchhHHHHHHHHHHHhcCCCcEEEEEec
Confidence 67899999998765544555667777655555667776665
No 328
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=25.09 E-value=70 Score=19.99 Aligned_cols=27 Identities=11% Similarity=0.006 Sum_probs=22.9
Q ss_pred EEEEeCCCChhhhhhccHHHHHHHHhC
Q psy6924 48 IMDFFTYCCINCMHILPIPILIRHILE 74 (89)
Q Consensus 48 vv~Fwa~wC~~C~~~~p~l~~l~~~~~ 74 (89)
|-.|+..-||.|--..+.|+++.+++.
T Consensus 7 I~~~~D~~cPwcyi~~~~l~~~~~~~~ 33 (202)
T 3fz5_A 7 IEFWFDFSSGYAFFAAQRIEALAAELG 33 (202)
T ss_dssp EEEEECTTCHHHHHHHTTHHHHHHHHT
T ss_pred eEEEEeCCCHHHHHHHHHHHHHHHHhC
Confidence 446778899999999999999988873
No 329
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=22.48 E-value=77 Score=17.93 Aligned_cols=9 Identities=44% Similarity=0.220 Sum_probs=4.8
Q ss_pred CCCCEEEEE
Q psy6924 42 LKNKIVIMD 50 (89)
Q Consensus 42 ~~gk~vvv~ 50 (89)
++||++.+-
T Consensus 78 l~~k~~~~~ 86 (137)
T 2fz5_A 78 LKGKKVGLF 86 (137)
T ss_dssp CSSCEEEEE
T ss_pred cCCCEEEEE
Confidence 456665543
No 330
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=21.67 E-value=64 Score=20.88 Aligned_cols=29 Identities=10% Similarity=-0.025 Sum_probs=23.3
Q ss_pred CEEEEEEeCCCChhhhhhccHHHHHHHHh
Q psy6924 45 KIVIMDFFTYCCINCMHILPIPILIRHIL 73 (89)
Q Consensus 45 k~vvv~Fwa~wC~~C~~~~p~l~~l~~~~ 73 (89)
+..|-.|+..-||.|--..+.|+++.+++
T Consensus 5 ~~~I~~~~D~~CPwcyi~~~~L~~~~~~~ 33 (234)
T 3rpp_A 5 PRTVELFYDVLSPYSWLGFEILCRYQNIW 33 (234)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHTTTS
T ss_pred CceEEEEEeCCCHHHHHHHHHHHHHHHHc
Confidence 45566778889999999989998887665
No 331
>4hsp_A Hypothetical protein; PF11736 family protein, DUF3299, structural genomics, joint for structural genomics, JCSG; HET: MSE; 2.45A {Pseudomonas aeruginosa}
Probab=21.33 E-value=40 Score=21.26 Aligned_cols=15 Identities=40% Similarity=0.747 Sum_probs=11.6
Q ss_pred CccccCCCCcccccc
Q psy6924 2 NYTGHCSFVPVPLVA 16 (89)
Q Consensus 2 ~~~~~~~~~~~p~~~ 16 (89)
-|-|+|.++|=|...
T Consensus 81 Py~GACiH~PPPPpN 95 (150)
T 4hsp_A 81 PYYGACIHVPPPPSN 95 (150)
T ss_dssp SSTTBTTTBCCCCGG
T ss_pred CCCCcCcCCCCCCCc
Confidence 388999999876654
No 332
>1ag9_A Flavodoxin; electron transport, reductive activation; HET: FMN BTB; 1.80A {Escherichia coli} SCOP: c.23.5.1 PDB: 1ahn_A*
Probab=21.10 E-value=1.5e+02 Score=17.94 Aligned_cols=44 Identities=16% Similarity=0.032 Sum_probs=23.7
Q ss_pred cCCCCEEEEEEeCCCChhhhhhccHHHHHHHHhCcCCeEEEEEE
Q psy6924 41 HLKNKIVIMDFFTYCCINCMHILPIPILIRHILEYKRTHIIKTF 84 (89)
Q Consensus 41 ~~~gk~vvv~Fwa~wC~~C~~~~p~l~~l~~~~~~~~~~vi~~~ 84 (89)
+++||.+.+--.+...+.-......+.++.+.+...+..+++.+
T Consensus 76 ~l~gk~vavfg~g~~~~~~~~f~~a~~~l~~~l~~~G~~~v~~~ 119 (175)
T 1ag9_A 76 DFNGKLVALFGCGDQEDYAEYFCDALGTIRDIIEPRGATIVGHW 119 (175)
T ss_dssp CCTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHTTTTCEECCCE
T ss_pred ccCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 46788766443332222222223456677777776677666543
Done!