BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6925
(131 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3MDJ|A Chain A, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase
Inhibitor, Bestatin
pdb|3MDJ|B Chain B, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase
Inhibitor, Bestatin
pdb|3MDJ|C Chain C, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase
Inhibitor, Bestatin
Length = 921
Score = 162 bits (409), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 92/131 (70%)
Query: 1 MSTYLVAVVVGEFDYVEETSSDGVLVRVYTPVGKREQGQFALHVASKVLPFYKDYFNIAY 60
MSTYLVA ++ +F+ V + + GV V VY K Q +AL A +L FY+DYF+I Y
Sbjct: 206 MSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKINQADYALDAAVTLLEFYEDYFSIPY 265
Query: 61 PLPKIDLVAVPDFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQWFG 120
PLPK DL A+PDF GAMENWGL TYRE LL D++ +SA ++ +I + V HELAHQWFG
Sbjct: 266 PLPKQDLAAIPDFQSGAMENWGLTTYRESALLFDAEKSSASSKLDITMTVAHELAHQWFG 325
Query: 121 NLVTMEWWTHL 131
NLVTMEWW L
Sbjct: 326 NLVTMEWWNDL 336
>pdb|3QNF|A Chain A, Crystal Structure Of The Open State Of Human Endoplasmic
Reticulum Aminopeptidase 1 Erap1
pdb|3QNF|B Chain B, Crystal Structure Of The Open State Of Human Endoplasmic
Reticulum Aminopeptidase 1 Erap1
pdb|3QNF|C Chain C, Crystal Structure Of The Open State Of Human Endoplasmic
Reticulum Aminopeptidase 1 Erap1
Length = 954
Score = 160 bits (406), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 91/131 (69%)
Query: 1 MSTYLVAVVVGEFDYVEETSSDGVLVRVYTPVGKREQGQFALHVASKVLPFYKDYFNIAY 60
MSTYLVA ++ +F+ V + + GV V VY K Q +AL A +L FY+DYF+I Y
Sbjct: 248 MSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKINQADYALDAAVTLLEFYEDYFSIPY 307
Query: 61 PLPKIDLVAVPDFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQWFG 120
PLPK DL A+PDF GAMENWGL TYRE LL D++ +SA ++ I + V HELAHQWFG
Sbjct: 308 PLPKQDLAAIPDFQSGAMENWGLTTYRESALLFDAEKSSASSKLGITMTVAHELAHQWFG 367
Query: 121 NLVTMEWWTHL 131
NLVTMEWW L
Sbjct: 368 NLVTMEWWNDL 378
>pdb|2YD0|A Chain A, Crystal Structure Of The Soluble Domain Of Human
Endoplasmic Reticulum Aminopeptidase 1 Erap1
Length = 897
Score = 160 bits (406), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 91/131 (69%)
Query: 1 MSTYLVAVVVGEFDYVEETSSDGVLVRVYTPVGKREQGQFALHVASKVLPFYKDYFNIAY 60
MSTYLVA ++ +F+ V + + GV V VY K Q +AL A +L FY+DYF+I Y
Sbjct: 197 MSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKINQADYALDAAVTLLEFYEDYFSIPY 256
Query: 61 PLPKIDLVAVPDFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQWFG 120
PLPK DL A+PDF GAMENWGL TYRE LL D++ +SA ++ I + V HELAHQWFG
Sbjct: 257 PLPKQDLAAIPDFQSGAMENWGLTTYRESALLFDAEKSSASSKLGITMTVAHELAHQWFG 316
Query: 121 NLVTMEWWTHL 131
NLVTMEWW L
Sbjct: 317 NLVTMEWWNDL 327
>pdb|3SE6|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum
Aminopeptidase 2
pdb|3SE6|B Chain B, Crystal Structure Of The Human Endoplasmic Reticulum
Aminopeptidase 2
Length = 967
Score = 154 bits (390), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 92/131 (70%)
Query: 1 MSTYLVAVVVGEFDYVEETSSDGVLVRVYTPVGKREQGQFALHVASKVLPFYKDYFNIAY 60
MSTYLVA +V +F + +S GV V +Y KR Q +AL + K+L FY+ YF+I Y
Sbjct: 259 MSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTHYALQASLKLLDFYEKYFDIYY 318
Query: 61 PLPKIDLVAVPDFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQWFG 120
PL K+DL+A+PDF+ GAMENWGL+TYRE LL D + +SA + + V+ HELAHQWFG
Sbjct: 319 PLSKLDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFG 378
Query: 121 NLVTMEWWTHL 131
NLVTMEWW +
Sbjct: 379 NLVTMEWWNDI 389
>pdb|4E36|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum
Aminopeptidase 2 Variant N392k
pdb|4E36|B Chain B, Crystal Structure Of The Human Endoplasmic Reticulum
Aminopeptidase 2 Variant N392k
Length = 967
Score = 154 bits (390), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 92/131 (70%)
Query: 1 MSTYLVAVVVGEFDYVEETSSDGVLVRVYTPVGKREQGQFALHVASKVLPFYKDYFNIAY 60
MSTYLVA +V +F + +S GV V +Y KR Q +AL + K+L FY+ YF+I Y
Sbjct: 259 MSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTHYALQASLKLLDFYEKYFDIYY 318
Query: 61 PLPKIDLVAVPDFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQWFG 120
PL K+DL+A+PDF+ GAMENWGL+TYRE LL D + +SA + + V+ HELAHQWFG
Sbjct: 319 PLSKLDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFG 378
Query: 121 NLVTMEWWTHL 131
NLVTMEWW +
Sbjct: 379 NLVTMEWWNDI 389
>pdb|4F5C|A Chain A, Crystal Structure Of The Spike Receptor Binding Domain Of
A Porcine Respiratory Coronavirus In Complex With The
Pig Aminopeptidase N Ectodomain
pdb|4F5C|B Chain B, Crystal Structure Of The Spike Receptor Binding Domain Of
A Porcine Respiratory Coronavirus In Complex With The
Pig Aminopeptidase N Ectodomain
Length = 959
Score = 152 bits (384), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 70/133 (52%), Positives = 95/133 (71%), Gaps = 2/133 (1%)
Query: 1 MSTYLVAVVVGEFDYVEETSSDGVLVRVYT-PVGKRE-QGQFALHVASKVLPFYKDYFNI 58
MSTYL+A +V EF V ET+ +GVL+R++ P E G +AL+V +L F+ +++N
Sbjct: 252 MSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNAIAEGHGMYALNVTGPILNFFANHYNT 311
Query: 59 AYPLPKIDLVAVPDFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQW 118
+YPLPK D +A+PDF+ GAMENWGLVTYRE LL D Q++S ++ + V+ HELAHQW
Sbjct: 312 SYPLPKSDQIALPDFNAGAMENWGLVTYRENALLFDPQSSSISNKERVVTVIAHELAHQW 371
Query: 119 FGNLVTMEWWTHL 131
FGNLVT+ WW L
Sbjct: 372 FGNLVTLAWWNDL 384
>pdb|4H5H|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Cleaved Poly-Alanine
pdb|4HOM|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Substance P
Length = 908
Score = 152 bits (384), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 70/133 (52%), Positives = 95/133 (71%), Gaps = 2/133 (1%)
Query: 1 MSTYLVAVVVGEFDYVEETSSDGVLVRVYT-PVGKRE-QGQFALHVASKVLPFYKDYFNI 58
MSTYL+A +V EF V ET+ +GVL+R++ P E G +AL+V +L F+ +++N
Sbjct: 208 MSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNAIAEGHGMYALNVTGPILNFFANHYNT 267
Query: 59 AYPLPKIDLVAVPDFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQW 118
+YPLPK D +A+PDF+ GAMENWGLVTYRE LL D Q++S ++ + V+ HELAHQW
Sbjct: 268 SYPLPKSDQIALPDFNAGAMENWGLVTYRENALLFDPQSSSISNKERVVTVIAHELAHQW 327
Query: 119 FGNLVTMEWWTHL 131
FGNLVT+ WW L
Sbjct: 328 FGNLVTLAWWNDL 340
>pdb|4FKE|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N
pdb|4FKH|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Alanine
pdb|4FKK|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Bestatin
Length = 909
Score = 152 bits (384), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 70/133 (52%), Positives = 95/133 (71%), Gaps = 2/133 (1%)
Query: 1 MSTYLVAVVVGEFDYVEETSSDGVLVRVYT-PVGKRE-QGQFALHVASKVLPFYKDYFNI 58
MSTYL+A +V EF V ET+ +GVL+R++ P E G +AL+V +L F+ +++N
Sbjct: 209 MSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNAIAEGHGMYALNVTGPILNFFANHYNT 268
Query: 59 AYPLPKIDLVAVPDFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQW 118
+YPLPK D +A+PDF+ GAMENWGLVTYRE LL D Q++S ++ + V+ HELAHQW
Sbjct: 269 SYPLPKSDQIALPDFNAGAMENWGLVTYRENALLFDPQSSSISNKERVVTVIAHELAHQW 328
Query: 119 FGNLVTMEWWTHL 131
FGNLVT+ WW L
Sbjct: 329 FGNLVTLAWWNDL 341
>pdb|4FYQ|A Chain A, Human Aminopeptidase N (Cd13)
pdb|4FYR|A Chain A, Human Aminopeptidase N (Cd13) In Complex With Bestatin
pdb|4FYS|A Chain A, Human Aminopeptidase N (Cd13) In Complex With Angiotensin
Iv
pdb|4FYT|A Chain A, Human Aminopeptidase N (Cd13) In Complex With Amastatin
Length = 903
Score = 151 bits (382), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 94/133 (70%), Gaps = 2/133 (1%)
Query: 1 MSTYLVAVVVGEFDYVEETSSDGVLVRVYTPVGK--REQGQFALHVASKVLPFYKDYFNI 58
MSTYL+A +V EFDYVE+ +S+GVL+R++ G +AL+V +L F+ +++
Sbjct: 211 MSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDT 270
Query: 59 AYPLPKIDLVAVPDFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQW 118
YPLPK D + +PDF+ GAMENWGLVTYRE LL D ++S+ ++ + V+ HELAHQW
Sbjct: 271 PYPLPKSDQIGLPDFNAGAMENWGLVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQW 330
Query: 119 FGNLVTMEWWTHL 131
FGNLVT+EWW L
Sbjct: 331 FGNLVTIEWWNDL 343
>pdb|4HOL|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Poly- Alanine
Length = 908
Score = 151 bits (381), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 69/133 (51%), Positives = 95/133 (71%), Gaps = 2/133 (1%)
Query: 1 MSTYLVAVVVGEFDYVEETSSDGVLVRVYT-PVGKRE-QGQFALHVASKVLPFYKDYFNI 58
MSTYL+A +V EF V ET+ +GVL+R++ P E G +AL+V +L F+ +++N
Sbjct: 208 MSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNAIAEGHGMYALNVTGPILNFFANHYNT 267
Query: 59 AYPLPKIDLVAVPDFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQW 118
+YPLPK D +A+PDF+ GAMENWGLVTYRE LL D Q++S ++ + V+ H+LAHQW
Sbjct: 268 SYPLPKSDQIALPDFNAGAMENWGLVTYRENALLFDPQSSSISNKERVVTVIAHQLAHQW 327
Query: 119 FGNLVTMEWWTHL 131
FGNLVT+ WW L
Sbjct: 328 FGNLVTLAWWNDL 340
>pdb|3Q7J|A Chain A, Engineered Thermoplasma Acidophilum F3 Factor Mimics Human
Aminopeptidase N (Apn) As A Target For Anticancer Drug
Development
pdb|3Q7J|B Chain B, Engineered Thermoplasma Acidophilum F3 Factor Mimics Human
Aminopeptidase N (Apn) As A Target For Anticancer Drug
Development
Length = 780
Score = 126 bits (316), Expect = 3e-30, Method: Composition-based stats.
Identities = 58/131 (44%), Positives = 88/131 (67%), Gaps = 4/131 (3%)
Query: 1 MSTYLVAVVVGEFDYVEETSSDGVLVRVYTPVGKREQGQFALHVASKVLPFYKDYFNIAY 60
MSTYL+ V +G+F Y E D L+ K + ++ L +A K + FY++YF I Y
Sbjct: 158 MSTYLLYVGIGKFRYEYEKYRDIDLILASL---KDIRSKYPLDMARKSVEFYENYFGIPY 214
Query: 61 PLPKIDLVAVPDFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQWFG 120
LPK+ L++VP+F GAMENWG +T+RE+ + + ++N++ ++N A V+ HE+AHQWFG
Sbjct: 215 ALPKMHLISVPEFGAGAMENWGAITFREIYMDI-AENSAVTVKRNSATVIAHEIAHQWFG 273
Query: 121 NLVTMEWWTHL 131
+LVTM+WW L
Sbjct: 274 DLVTMKWWNDL 284
>pdb|1Z1W|A Chain A, Crystal Structures Of The Tricorn Interacting Facor F3
From Thermoplasma Acidophilum, A Zinc Aminopeptidase In
Three Different Conformations
pdb|1Z5H|A Chain A, Crystal Structures Of The Tricorn Interacting Factor F3
From Thermoplasma Acidophilum
pdb|1Z5H|B Chain B, Crystal Structures Of The Tricorn Interacting Factor F3
From Thermoplasma Acidophilum
Length = 780
Score = 125 bits (314), Expect = 6e-30, Method: Composition-based stats.
Identities = 58/131 (44%), Positives = 88/131 (67%), Gaps = 4/131 (3%)
Query: 1 MSTYLVAVVVGEFDYVEETSSDGVLVRVYTPVGKREQGQFALHVASKVLPFYKDYFNIAY 60
MSTYL+ V +G+F Y E D L+ K + ++ L +A K + FY++YF I Y
Sbjct: 158 MSTYLLYVGIGKFRYEYEKYRDIDLILASL---KDIRSKYPLDMARKSVEFYENYFGIPY 214
Query: 61 PLPKIDLVAVPDFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQWFG 120
LPK+ L++VP+F GAMENWG +T+RE+ + + ++N++ ++N A V+ HE+AHQWFG
Sbjct: 215 ALPKMHLISVPEFGAGAMENWGAITFREIYMDI-AENSAVTVKRNSANVIAHEIAHQWFG 273
Query: 121 NLVTMEWWTHL 131
+LVTM+WW L
Sbjct: 274 DLVTMKWWNDL 284
>pdb|3T8V|A Chain A, A Bestatin-Based Chemical Biology Strategy Reveals
Distinct Roles For Malaria M1- And M17-Family
Aminopeptidases
Length = 895
Score = 85.1 bits (209), Expect = 1e-17, Method: Composition-based stats.
Identities = 49/133 (36%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 4 YLVAVVVGEFD-----YVEETSSDGVLVRVYTPVGKREQGQFALHVASKVLPFYKDYFNI 58
YL AVV G+ Y+ + + V + V++ + Q+AL K + F +DYF +
Sbjct: 188 YLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQWALECLKKSMAFDEDYFGL 247
Query: 59 AYPLPKIDLVAVPDFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQW 118
Y L +++LVAV DF+ GAMEN GL + LL +N+ + I VVGHE HQ+
Sbjct: 248 EYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHQY 307
Query: 119 FGNLVTMEWWTHL 131
GN VT+ W L
Sbjct: 308 TGNRVTLRDWFQL 320
>pdb|3EBI|A Chain A, Structure Of The M1 Alanylaminopeptidase From Malaria
Complexed With The Phosphinate Dipeptide Analog
Length = 890
Score = 85.1 bits (209), Expect = 1e-17, Method: Composition-based stats.
Identities = 49/133 (36%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 4 YLVAVVVGEFD-----YVEETSSDGVLVRVYTPVGKREQGQFALHVASKVLPFYKDYFNI 58
YL AVV G+ Y+ + + V + V++ + Q+AL K + F +DYF +
Sbjct: 189 YLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQWALECLKKSMAFDEDYFGL 248
Query: 59 AYPLPKIDLVAVPDFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQW 118
Y L +++LVAV DF+ GAMEN GL + LL +N+ + I VVGHE HQ+
Sbjct: 249 EYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHQY 308
Query: 119 FGNLVTMEWWTHL 131
GN VT+ W L
Sbjct: 309 TGNRVTLRDWFQL 321
>pdb|3EBG|A Chain A, Structure Of The M1 Alanylaminopeptidase From Malaria
pdb|3EBH|A Chain A, Structure Of The M1 Alanylaminopeptidase From Malaria
Complexed With Bestatin
Length = 889
Score = 85.1 bits (209), Expect = 1e-17, Method: Composition-based stats.
Identities = 49/133 (36%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 4 YLVAVVVGEFD-----YVEETSSDGVLVRVYTPVGKREQGQFALHVASKVLPFYKDYFNI 58
YL AVV G+ Y+ + + V + V++ + Q+AL K + F +DYF +
Sbjct: 188 YLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQWALECLKKSMAFDEDYFGL 247
Query: 59 AYPLPKIDLVAVPDFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQW 118
Y L +++LVAV DF+ GAMEN GL + LL +N+ + I VVGHE HQ+
Sbjct: 248 EYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHQY 307
Query: 119 FGNLVTMEWWTHL 131
GN VT+ W L
Sbjct: 308 TGNRVTLRDWFQL 320
>pdb|3Q43|A Chain A, X-Ray Crystal Structure Of Pfa-M1 Bound To Bestatin
Derivative 15
pdb|3Q44|A Chain A, X-Ray Crystal Structure Of Pfa-M1 Bound To Bestatin
Derivative 16
Length = 891
Score = 85.1 bits (209), Expect = 1e-17, Method: Composition-based stats.
Identities = 49/133 (36%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 4 YLVAVVVGEFD-----YVEETSSDGVLVRVYTPVGKREQGQFALHVASKVLPFYKDYFNI 58
YL AVV G+ Y+ + + V + V++ + Q+AL K + F +DYF +
Sbjct: 189 YLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQWALECLKKSMAFDEDYFGL 248
Query: 59 AYPLPKIDLVAVPDFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQW 118
Y L +++LVAV DF+ GAMEN GL + LL +N+ + I VVGHE HQ+
Sbjct: 249 EYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHQY 308
Query: 119 FGNLVTMEWWTHL 131
GN VT+ W L
Sbjct: 309 TGNRVTLRDWFQL 321
>pdb|2GTQ|A Chain A, Crystal Structure Of Aminopeptidase N From Human Pathogen
Neisseria Meningitidis
Length = 867
Score = 69.3 bits (168), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Query: 3 TYLVAVVVGEF----DYVEETSSDGVLVRVYTPVGKREQGQFALHVASKVLPFYKDYFNI 58
+YL A+V G+ DY S V + YT + + FA+ + + F +
Sbjct: 180 SYLFALVAGDLAVTEDYFTTXSGRNVKIEFYTTEADKPKVGFAVESLKNAXKWDETRFGL 239
Query: 59 AYPLPKIDLVAVPDFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQW 118
Y L +VAV DF+ GA EN GL + +L DS+ + + I VVGHE H W
Sbjct: 240 EYDLDIFXVVAVGDFNXGAXENKGLNIFNTKFVLADSRTATDTDFEGIESVVGHEYFHNW 299
Query: 119 FGNLVTMEWWTHL 131
GN VT W L
Sbjct: 300 TGNRVTCRDWFQL 312
>pdb|2HPO|A Chain A, Structure Of Aminopeptidase N From E. Coli Suggests A
Compartmentalized, Gated Active Site
pdb|2HPT|A Chain A, Crystal Structure Of E. Coli Pepn (Aminopeptidase N)in
Complex With Bestatin
pdb|3KED|A Chain A, Crystal Structure Of Aminopeptidase N In Complex With 2,4-
Diaminobutyric Acid
pdb|3B2P|A Chain A, Crystal Structure Of E. Coli Aminopeptidase N In Complex
With Arginine
pdb|3B2X|A Chain A, Crystal Structure Of E. Coli Aminopeptidase N In Complex
With Lysine
pdb|3B34|A Chain A, Crystal Structure Of E. Coli Aminopeptidase N In Complex
With Phenylalanine
pdb|3B37|A Chain A, Crystal Structure Of E. Coli Aminopeptidase N In Complex
With Tyrosine
pdb|3B3B|A Chain A, Crystal Structure Of E. Coli Aminopeptidase N In Complex
With Tryptophan
pdb|3QJX|A Chain A, Crystal Structure Of E. Coli Aminopeptidase N In Complex
With L-Serine
Length = 891
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Query: 4 YLVAVVVGEFDYVEET----SSDGVLVRVYTPVGKREQGQFALHVASKVLPFYKDYFNIA 59
YL A+V G+FD + +T S V + +Y G ++ +A+ + + ++ F +
Sbjct: 206 YLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPWAMTSLKNSMKWDEERFGLE 265
Query: 60 YPLPKIDLVAVPDFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQWF 119
Y L +VAV F+ GAMEN GL + +L + + +I V+GHE H W
Sbjct: 266 YDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEYFHNWT 325
Query: 120 GNLVTMEWWTHL 131
GN VT W L
Sbjct: 326 GNRVTCRDWFQL 337
>pdb|3PUU|A Chain A, Crystal Structure Of Glu121gln Mutant Of E. Coli
Aminopeptidase N
Length = 891
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Query: 4 YLVAVVVGEFDYVEET----SSDGVLVRVYTPVGKREQGQFALHVASKVLPFYKDYFNIA 59
YL A+V G+FD + +T S V + +Y G ++ +A+ + + ++ F +
Sbjct: 206 YLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPWAMTSLKNSMKWDEERFGLE 265
Query: 60 YPLPKIDLVAVPDFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQWF 119
Y L +VAV F+ GAMEN GL + +L + + +I V+GHE H W
Sbjct: 266 YDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEYFHNWT 325
Query: 120 GNLVTMEWWTHL 131
GN VT W L
Sbjct: 326 GNRVTCRDWFQL 337
>pdb|2DQ6|A Chain A, Crystal Structure Of Aminopeptidase N From Escherichia
Coli
pdb|2DQM|A Chain A, Crystal Structure Of Aminopeptidase N Complexed With
Bestatin
pdb|2ZXG|A Chain A, Aminopeptidase N Complexed With The Aminophosphinic
Inhibitor Of Pl250, A Transition State Analogue
Length = 870
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Query: 4 YLVAVVVGEFDYVEET----SSDGVLVRVYTPVGKREQGQFALHVASKVLPFYKDYFNIA 59
YL A+V G+FD + +T S V + +Y G ++ +A+ + + ++ F +
Sbjct: 185 YLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPWAMTSLKNSMKWDEERFGLE 244
Query: 60 YPLPKIDLVAVPDFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQWF 119
Y L +VAV F+ GAMEN GL + +L + + +I V+GHE H W
Sbjct: 245 YDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEYFHNWT 304
Query: 120 GNLVTMEWWTHL 131
GN VT W L
Sbjct: 305 GNRVTCRDWFQL 316
>pdb|3U9W|A Chain A, Structure Of Human Leukotriene A4 Hydrolase In Complex
With Inhibitor Sc57461a
Length = 608
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 15/129 (11%)
Query: 4 YLVAVVVGEFDYVEETSSDGVLVRVYTPVGKREQGQFALHVASKVLPFYKDYFNIAYPLP 63
YL+A+VVG E+ G V++ + E+ + +L +D Y
Sbjct: 198 YLIALVVGAL----ESRQIGPRTLVWSEKEQVEKSAYEFSETESMLKIAED-LGGPYVWG 252
Query: 64 KIDLVAVP-DFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQWFGNL 122
+ DL+ +P F G MEN L L D ++++ V+ HE++H W GNL
Sbjct: 253 QYDLLVLPPSFPYGGMENPCLTFVTPTLLAGD---------KSLSNVIAHEISHSWTGNL 303
Query: 123 VTMEWWTHL 131
VT + W H
Sbjct: 304 VTNKTWDHF 312
>pdb|1SQM|A Chain A, Structure Of [r563a] Leukotriene A4 Hydrolase
Length = 610
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 15/129 (11%)
Query: 4 YLVAVVVGEFDYVEETSSDGVLVRVYTPVGKREQGQFALHVASKVLPFYKDYFNIAYPLP 63
YL+A+VVG E+ G V++ + E+ + +L +D Y
Sbjct: 200 YLIALVVGAL----ESRQIGPRTLVWSEKEQVEKSAYEFSETESMLKIAED-LGGPYVWG 254
Query: 64 KIDLVAVP-DFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQWFGNL 122
+ DL+ +P F G MEN L L D ++++ V+ HE++H W GNL
Sbjct: 255 QYDLLVLPPSFPYGGMENPCLTFVTPTLLAGD---------KSLSNVIAHEISHSWTGNL 305
Query: 123 VTMEWWTHL 131
VT + W H
Sbjct: 306 VTNKTWDHF 314
>pdb|1GW6|A Chain A, Structure Of Leukotriene A4 Hydrolase D375n Mutant
Length = 610
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 15/129 (11%)
Query: 4 YLVAVVVGEFDYVEETSSDGVLVRVYTPVGKREQGQFALHVASKVLPFYKDYFNIAYPLP 63
YL+A+VVG E+ G V++ + E+ + +L +D Y
Sbjct: 200 YLIALVVGAL----ESRQIGPRTLVWSEKEQVEKSAYEFSETESMLKIAED-LGGPYVWG 254
Query: 64 KIDLVAVP-DFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQWFGNL 122
+ DL+ +P F G MEN L L D ++++ V+ HE++H W GNL
Sbjct: 255 QYDLLVLPPSFPYGGMENPCLTFVTPTLLAGD---------KSLSNVIAHEISHSWTGNL 305
Query: 123 VTMEWWTHL 131
VT + W H
Sbjct: 306 VTNKTWDHF 314
>pdb|2R59|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor Rb3041
pdb|3B7R|L Chain L, Leukotriene A4 Hydrolase Complexed With Inhibitor Rb3040
pdb|3B7U|X Chain X, Leukotriene A4 Hydrolase Complexed With Kelatorphan
Length = 616
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 15/129 (11%)
Query: 4 YLVAVVVGEFDYVEETSSDGVLVRVYTPVGKREQGQFALHVASKVLPFYKDYFNIAYPLP 63
YL+A+VVG E+ G V++ + E+ + +L +D Y
Sbjct: 206 YLIALVVGAL----ESRQIGPRTLVWSEKEQVEKSAYEFSETESMLKIAED-LGGPYVWG 260
Query: 64 KIDLVAVP-DFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQWFGNL 122
+ DL+ +P F G MEN L L D ++++ V+ HE++H W GNL
Sbjct: 261 QYDLLVLPPSFPYGGMENPCLTFVTPTLLAGD---------KSLSNVIAHEISHSWTGNL 311
Query: 123 VTMEWWTHL 131
VT + W H
Sbjct: 312 VTNKTWDHF 320
>pdb|3CHO|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex
With 2-Amino-N-[4-(Phenylmethoxy)phenyl]-Acetamide
pdb|3CHP|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex
With (3s)-3-Amino-4-Oxo-4-[(4-Phenylmethoxyphenyl)
Amino]butanoic Acid
pdb|3CHQ|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex
With N5-[4-(Phenylmethoxy)phenyl]-L-Glutamine
pdb|3CHR|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex
With 4-Amino-N-[4-(Phenylmethoxy)phenyl]-Butanamide
pdb|3CHS|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex
With (2s)-2-Amino-5-[[4-[(2s)-2-Hydroxy-2-Phenyl-
Ethoxy]phenyl]amino]-5-Oxo-Pentanoic Acid
Length = 610
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 15/129 (11%)
Query: 4 YLVAVVVGEFDYVEETSSDGVLVRVYTPVGKREQGQFALHVASKVLPFYKDYFNIAYPLP 63
YL+A+VVG E+ G V++ + E+ + +L +D Y
Sbjct: 200 YLIALVVGAL----ESRQIGPRTLVWSEKEQVEKSAYEFSETESMLKIAED-LGGPYVWG 254
Query: 64 KIDLVAVP-DFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQWFGNL 122
+ DL+ +P F G MEN L L D ++++ V+ HE++H W GNL
Sbjct: 255 QYDLLVLPPSFPYGGMENPCLTFVTPTLLAGD---------KSLSNVIAHEISHSWTGNL 305
Query: 123 VTMEWWTHL 131
VT + W H
Sbjct: 306 VTNKTWDHF 314
>pdb|1HS6|A Chain A, Structure Of Leukotriene A4 Hydrolase Complexed With
Bestatin.
pdb|2VJ8|A Chain A, Complex Of Human Leukotriene A4 Hydrolase With A
Hydroxamic Acid Inhibitor
pdb|3FTS|A Chain A, Leukotriene A4 Hydrolase In Complex With Resveratrol
pdb|3FTU|A Chain A, Leukotriene A4 Hydrolase In Complex With
Dihydroresveratrol
pdb|3FTV|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment N-
(Pyridin-3-Ylmethyl)aniline
pdb|3FTW|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragments N-
(Pyridin-3-Ylmethyl)aniline And Acetate
pdb|3FTX|A Chain A, Leukotriene A4 Hydrolase In Complex With
Dihydroresveratrol And Bestatin
pdb|3FTY|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 3-
(Benzyloxy)pyridin-2-Amine
pdb|3FU0|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 4-(4-
Fluorobenzoyl)pyridine
pdb|3FU3|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 4-(2-
Amino-1,3-Thiazol-4-Yl)phenol
pdb|3FU5|A Chain A, Leukotriene A4 Hydrolase In Complex With (5-Thiophen-2-
Ylthiophen-2-Yl)methylamine
pdb|3FU6|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment (4-
Thiophen-2-Ylphenyl)methanamine
pdb|3FUD|A Chain A, Leukotriene A4 Hydrolase In Complex With N-Methyl-1-(2-
Thiophen-2-Ylphenyl)methanamine
pdb|3FUE|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 5-
Chloroindole And Bestatin
pdb|3FUF|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 5-
Fluoroindole And Bestatin
pdb|3FUH|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 5-
Hydroxyindole And Bestatin
pdb|3FUI|A Chain A, Leukotriene A4 Hydrolase In Complex With N-Benzyl-4-[(2r)-
Pyrrolidin-2-Ylmethoxy]aniline
pdb|3FUJ|A Chain A, Leukotriene A4 Hydrolase In Complex With
5-[2-(1h-Pyrrol-1- Yl)ethoxy]-1h-Indole
pdb|3FUK|A Chain A, Leukotriene A4 Hydrolase In Complex With 1-[2-(1h-Indol-5-
Yloxy)ethyl]piperidine-4-Carboxylic Acid
pdb|3FUM|A Chain A, Leukotriene A4 Hydrolase In Complex With
(R)-Pyridin-4-Yl[4-
(2-Pyrrolidin-1-Ylethoxy)phenyl]methanol
pdb|3FUN|A Chain A, Leukotriene A4 Hydrolase In Complex With {4-[(2r)-
Pyrrolidin-2-Ylmethoxy]phenyl}(4-Thiophen-3-Ylphenyl)
Methanone
pdb|3FH5|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor
(2r)-2-[(4- Benzylphenoxy)methyl]pyrrolidine.
pdb|3FH7|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor
4-[(2s)-2-{[4-(4-
Chlorophenoxy)phenoxy]methyl}pyrrolidin-1-Yl]butanoate.
pdb|3FH8|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor 1-[2-(4-
Benzylphenoxy)ethyl]pyrrolidine.
pdb|3FHE|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor N-[3-(4-
Benzylphenoxy)propyl]-N-Methyl-Beta-Alanine.
pdb|3FTZ|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment
2-(pyridin-3- Ylmethoxy)aniline
pdb|3FUL|A Chain A, Leukotriene A4 Hydrolase In Complex With
Pyridin-4-Yl[4-(2-Pyrrolidin-
1-Ylethoxy)phenyl]methanone
pdb|4DPR|A Chain A, Structure Of Human Leukotriene A4 Hydrolase In Complex
With Inhibitor Captopril
Length = 611
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 15/129 (11%)
Query: 4 YLVAVVVGEFDYVEETSSDGVLVRVYTPVGKREQGQFALHVASKVLPFYKDYFNIAYPLP 63
YL+A+VVG E+ G V++ + E+ + +L +D Y
Sbjct: 201 YLIALVVGAL----ESRQIGPRTLVWSEKEQVEKSAYEFSETESMLKIAED-LGGPYVWG 255
Query: 64 KIDLVAVP-DFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQWFGNL 122
+ DL+ +P F G MEN L L D ++++ V+ HE++H W GNL
Sbjct: 256 QYDLLVLPPSFPYGGMENPCLTFVTPTLLAGD---------KSLSNVIAHEISHSWTGNL 306
Query: 123 VTMEWWTHL 131
VT + W H
Sbjct: 307 VTNKTWDHF 315
>pdb|3CIA|A Chain A, Crystal Structure Of Cold-Aminopeptidase From Colwellia
Psychrerythraea
pdb|3CIA|B Chain B, Crystal Structure Of Cold-Aminopeptidase From Colwellia
Psychrerythraea
pdb|3CIA|C Chain C, Crystal Structure Of Cold-Aminopeptidase From Colwellia
Psychrerythraea
pdb|3CIA|D Chain D, Crystal Structure Of Cold-Aminopeptidase From Colwellia
Psychrerythraea
Length = 605
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 19/131 (14%)
Query: 4 YLVAVVVGEFDYVEETSSDGVLVRVY---TPVGKREQGQFALHVASKVLPFYKDYFNIAY 60
YL+A+ VG+ ++ + G+ Y V + + Q + A ++ Y Y Y
Sbjct: 205 YLIAIGVGDLEFKAMSHQTGIYAESYILDAAVAEFDDTQAMIDKAEQM---YGKYRWGRY 261
Query: 61 PLPKIDLVAVPDFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQWFG 120
L L+ P F G MEN L + D +++ ++ HELAH W G
Sbjct: 262 DL----LMLPPSFPFGGMENPRLSFITPTVVAGD---------KSLVNLIAHELAHSWSG 308
Query: 121 NLVTMEWWTHL 131
NLVT E W L
Sbjct: 309 NLVTNESWRDL 319
>pdb|3B7S|A Chain A, [e296q]lta4h In Complex With Rsr Substrate
pdb|3B7T|A Chain A, [e296q]lta4h In Complex With Arg-Ala-Arg Substrate
Length = 616
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 15/129 (11%)
Query: 4 YLVAVVVGEFDYVEETSSDGVLVRVYTPVGKREQGQFALHVASKVLPFYKDYFNIAYPLP 63
YL+A+VVG E+ G V++ + E+ + +L +D Y
Sbjct: 206 YLIALVVGAL----ESRQIGPRTLVWSEKEQVEKSAYEFSETESMLKIAED-LGGPYVWG 260
Query: 64 KIDLVAVP-DFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQWFGNL 122
+ DL+ +P F G MEN L L D ++++ V+ H+++H W GNL
Sbjct: 261 QYDLLVLPPSFPYGGMENPCLTFVTPTLLAGD---------KSLSNVIAHQISHSWTGNL 311
Query: 123 VTMEWWTHL 131
VT + W H
Sbjct: 312 VTNKTWDHF 320
>pdb|1H19|A Chain A, Structure Of [e271q] Leukotriene A4 Hydrolase
Length = 611
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 15/129 (11%)
Query: 4 YLVAVVVGEFDYVEETSSDGVLVRVYTPVGKREQGQFALHVASKVLPFYKDYFNIAYPLP 63
YL+A+VVG E+ G V++ + E+ + +L +D Y
Sbjct: 201 YLIALVVGAL----ESRQIGPRTLVWSEKEQVEKSAYEFSETESMLKIAED-LGGPYVWG 255
Query: 64 KIDLVAVP-DFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQWFGNL 122
+ DL+ +P F G M+N L L D ++++ V+ HE++H W GNL
Sbjct: 256 QYDLLVLPPSFPYGGMQNPCLTFVTPTLLAGD---------KSLSNVIAHEISHSWTGNL 306
Query: 123 VTMEWWTHL 131
VT + W H
Sbjct: 307 VTNKTWDHF 315
>pdb|2XQ0|A Chain A, Structure Of Yeast Lta4 Hydrolase In Complex With Bestatin
Length = 632
Score = 38.5 bits (88), Expect = 0.001, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 32/65 (49%), Gaps = 9/65 (13%)
Query: 67 LVAVPDFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQWFGNLVTME 126
LV V + G ME+ + T+ LL A R NI V+ HELAH W GNLVT
Sbjct: 265 LVNVDSYPYGGMESPNM-TFATPTLL-------AHDRSNID-VIAHELAHSWSGNLVTNC 315
Query: 127 WWTHL 131
W H
Sbjct: 316 SWNHF 320
>pdb|2XPY|A Chain A, Structure Of Native Leukotriene A4 Hydrolase From
Saccharomyces Cerevisiae
pdb|2XPZ|A Chain A, Structure Of Native Yeast Lta4 Hydrolase
Length = 632
Score = 37.4 bits (85), Expect = 0.002, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 32/65 (49%), Gaps = 9/65 (13%)
Query: 67 LVAVPDFSCGAMENWGLVTYREVCLLVDSQNTSAITRQNIALVVGHELAHQWFGNLVTME 126
LV V + G ME+ + T+ L+ A R NI V+ HELAH W GNLVT
Sbjct: 265 LVNVDSYPYGGMESPNM-TFATPTLI-------AHDRSNID-VIAHELAHSWSGNLVTNC 315
Query: 127 WWTHL 131
W H
Sbjct: 316 SWNHF 320
>pdb|2DMG|A Chain A, Solution Structure Of The Third C2 Domain Of Kiaa1228
Protein
Length = 142
Score = 29.3 bits (64), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 26 VRVYTPVGKREQGQFALHVASKVL-PFYKDYFNIAYPLPKI 65
VR+Y KR G+ HV+ K L P + F+ + LP++
Sbjct: 48 VRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEV 88
>pdb|1DMT|A Chain A, Structure Of Human Neutral Endopeptidase Complexed With
Phosphoramidon
pdb|1R1H|A Chain A, Structural Analysis Of Neprilysin With Various Specific
And Potent Inhibitors
pdb|1R1I|A Chain A, Structural Analysis Of Neprilysin With Various Specific
And Potent Inhibitors
pdb|1R1J|A Chain A, Structural Analysis Of Neprilysin With Various Specific
And Potent Inhibitors
pdb|1Y8J|A Chain A, Crystal Structure Of Human Nep Complexed With An
Imidazo[4,5- C]pyridine Inhibitor
pdb|2QPJ|A Chain A, Human Nep Complexed With A Bifunctional NepDPP IV
INHIBITOR
pdb|2YB9|A Chain A, Crystal Structure Of Human Neutral Endopeptidase Complexed
With A Heteroarylalanine Diacid
Length = 696
Score = 26.9 bits (58), Expect = 2.8, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 11/45 (24%)
Query: 95 SQNTSAITRQNIALVVGHELAHQW---------FGNLVTMEWWTH 130
+Q ++++ I +V+GHE+ H + G+LV +WWT
Sbjct: 513 AQQSNSLNYGGIGMVIGHEITHGFDDNGRNFNKDGDLV--DWWTQ 555
>pdb|3ZUK|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Zinc
Metalloprotease Zmp1 In Complex With Inhibitor
pdb|3ZUK|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Zinc
Metalloprotease Zmp1 In Complex With Inhibitor
Length = 699
Score = 26.6 bits (57), Expect = 4.1, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 11/45 (24%)
Query: 94 DSQNTSAITRQNIALVVGHELAHQW---------FGNLVTMEWWT 129
D Q A I V+GHE+ H + GNLV +WWT
Sbjct: 511 DPQADEAANYGGIGAVIGHEIGHGFDDQGAKYDGDGNLV--DWWT 553
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.137 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,944,497
Number of Sequences: 62578
Number of extensions: 145406
Number of successful extensions: 257
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 215
Number of HSP's gapped (non-prelim): 35
length of query: 131
length of database: 14,973,337
effective HSP length: 88
effective length of query: 43
effective length of database: 9,466,473
effective search space: 407058339
effective search space used: 407058339
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 46 (22.3 bits)