BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6930
(162 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O95180|CAC1H_HUMAN Voltage-dependent T-type calcium channel subunit alpha-1H OS=Homo
sapiens GN=CACNA1H PE=1 SV=4
Length = 2353
Score = 112 bits (280), Expect = 1e-24, Method: Composition-based stats.
Identities = 66/99 (66%), Positives = 78/99 (78%), Gaps = 2/99 (2%)
Query: 1 MAKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAH 60
MA G+RALLDTV+QALPQVGNLGLLF LLFFI+AALGVELFGRLECS++ PC+GL HA
Sbjct: 1731 MATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGRLECSEDNPCEGLSRHAT 1790
Query: 61 FSNFGMAFLTLFRVDMDMDKSSHMDKSSHMDKSSHKDTH 99
FSNFGMAFLTLFRV + + M + + + S +D H
Sbjct: 1791 FSNFGMAFLTLFRVSTGDNWNGIMKDT--LRECSREDKH 1827
Score = 37.0 bits (84), Expect = 0.050, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 15/86 (17%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELF-GRL---------ECSDELP 51
A G++ +++T++ +L +GN+ L+ F IF LGV+LF G+ S +
Sbjct: 1413 APGLKLVVETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYCEGPDTRNISTKAQ 1472
Query: 52 CQG-----LGEHAHFSNFGMAFLTLF 72
C+ + +F N G A ++LF
Sbjct: 1473 CRAAHYRWVRRKYNFDNLGQALMSLF 1498
Score = 32.0 bits (71), Expect = 1.8, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query: 4 GIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG-----RLECSDELPCQGLGEH 58
+R L +++ + V L L FIF+ LG+ LFG + + D +P +
Sbjct: 900 ALRRQLVVLVKTMDNVATFCTLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVP-----DR 954
Query: 59 AHFSNFGMAFLTLFRV 74
+F + A +T+F++
Sbjct: 955 KNFDSLLWAIVTVFQI 970
>sp|O88427|CAC1H_MOUSE Voltage-dependent T-type calcium channel subunit alpha-1H OS=Mus
musculus GN=Cacna1h PE=2 SV=3
Length = 2365
Score = 110 bits (276), Expect = 3e-24, Method: Composition-based stats.
Identities = 61/74 (82%), Positives = 68/74 (91%)
Query: 1 MAKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAH 60
MA G+RALLDTV+QALPQVGNLGLLF LLFFI+AALGVELFGRLECS++ PC+GL HA
Sbjct: 1742 MATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGRLECSEDNPCEGLSRHAT 1801
Query: 61 FSNFGMAFLTLFRV 74
F+NFGMAFLTLFRV
Sbjct: 1802 FTNFGMAFLTLFRV 1815
Score = 37.0 bits (84), Expect = 0.049, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 15/86 (17%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELF-GRL---ECSDELPCQGLGE 57
A G++ +++T++ +L +GN+ L+ F IF LGV+LF G+ E +D E
Sbjct: 1424 APGLKLVVETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYCEGTDTRNITTKAE 1483
Query: 58 -HA----------HFSNFGMAFLTLF 72
HA +F N G A ++LF
Sbjct: 1484 CHAAHYRWVRRKYNFDNLGQALMSLF 1509
Score = 35.0 bits (79), Expect = 0.19, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Query: 4 GIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG-----RLECSDELPCQGLGEH 58
+R L +M+ + V +L L FIF+ LG+ LFG + + D +P +
Sbjct: 897 ALRRQLVVLMRTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDSGDTVP-----DR 951
Query: 59 AHFSNFGMAFLTLFRV 74
+F + A +T+F++
Sbjct: 952 KNFDSLLWAIVTVFQI 967
>sp|Q9EQ60|CAC1H_RAT Voltage-dependent T-type calcium channel subunit alpha-1H OS=Rattus
norvegicus GN=Cacna1h PE=2 SV=2
Length = 2359
Score = 110 bits (276), Expect = 3e-24, Method: Composition-based stats.
Identities = 61/74 (82%), Positives = 68/74 (91%)
Query: 1 MAKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAH 60
MA G+RALLDTV+QALPQVGNLGLLF LLFFI+AALGVELFGRLECS++ PC+GL HA
Sbjct: 1736 MATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGRLECSEDNPCEGLSRHAT 1795
Query: 61 FSNFGMAFLTLFRV 74
F+NFGMAFLTLFRV
Sbjct: 1796 FTNFGMAFLTLFRV 1809
Score = 37.0 bits (84), Expect = 0.051, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 15/86 (17%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELF-GRL---ECSDELPCQGLGE 57
A G++ +++T++ +L +GN+ L+ F IF LGV+LF G+ E +D E
Sbjct: 1424 APGLKLVVETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYCEGTDTRNITTKAE 1483
Query: 58 -HA----------HFSNFGMAFLTLF 72
HA +F N G A ++LF
Sbjct: 1484 CHAAHYRWVRRKYNFDNLGQALMSLF 1509
Score = 35.0 bits (79), Expect = 0.20, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Query: 4 GIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG-----RLECSDELPCQGLGEH 58
+R L +M+ + V +L L FIF+ LG+ LFG + + D +P +
Sbjct: 897 ALRRQLVVLMRTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDSGDTVP-----DR 951
Query: 59 AHFSNFGMAFLTLFRV 74
+F + A +T+F++
Sbjct: 952 KNFDSLLWAIVTVFQI 967
>sp|Q9Z0Y8|CAC1I_RAT Voltage-dependent T-type calcium channel subunit alpha-1I OS=Rattus
norvegicus GN=Cacna1i PE=2 SV=3
Length = 2201
Score = 105 bits (261), Expect = 2e-22, Method: Composition-based stats.
Identities = 58/74 (78%), Positives = 66/74 (89%)
Query: 1 MAKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAH 60
MA G+RALLDTV+QALPQVGNLGLLF LLFFI+AALGVELFG+L C+DE PC+G+ HA
Sbjct: 1560 MATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLVCNDENPCEGMSRHAT 1619
Query: 61 FSNFGMAFLTLFRV 74
F NFGMAFLTLF+V
Sbjct: 1620 FENFGMAFLTLFQV 1633
Score = 35.8 bits (81), Expect = 0.13, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 27/40 (67%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELF 41
A G++ +++T++ +L +GN+ L+ F IF LGV+LF
Sbjct: 1248 APGLKLVVETLISSLKPIGNIVLICCAFFIIFGILGVQLF 1287
Score = 35.4 bits (80), Expect = 0.15, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Query: 4 GIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG-----RLECSDELPCQGLGEH 58
+R L +M+ + V +L L FIF+ LG+ +FG R + D +P +
Sbjct: 705 ALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLRTDTGDTVP-----DR 759
Query: 59 AHFSNFGMAFLTLFRV 74
+F + A +T+F++
Sbjct: 760 KNFDSLLWAIVTVFQI 775
>sp|Q9P0X4|CAC1I_HUMAN Voltage-dependent T-type calcium channel subunit alpha-1I OS=Homo
sapiens GN=CACNA1I PE=1 SV=1
Length = 2223
Score = 104 bits (260), Expect = 2e-22, Method: Composition-based stats.
Identities = 58/74 (78%), Positives = 66/74 (89%)
Query: 1 MAKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAH 60
MA G+RALLDTV+QALPQVGNLGLLF LLFFI+AALGVELFG+L C+DE PC+G+ HA
Sbjct: 1601 MATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLVCNDENPCEGMSRHAT 1660
Query: 61 FSNFGMAFLTLFRV 74
F NFGMAFLTLF+V
Sbjct: 1661 FENFGMAFLTLFQV 1674
Score = 35.8 bits (81), Expect = 0.12, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 15/86 (17%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELF-GRL---------ECSDELP 51
A G++ +++T++ +L +GN+ L+ F IF LGV+LF G+ ++
Sbjct: 1289 APGLKLVVETLISSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYHCLGVDTRNITNRSD 1348
Query: 52 CQG-----LGEHAHFSNFGMAFLTLF 72
C + +F N G A ++LF
Sbjct: 1349 CMAANYRWVHHKYNFDNLGQALMSLF 1374
Score = 35.4 bits (80), Expect = 0.16, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Query: 4 GIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG-----RLECSDELPCQGLGEH 58
+R L +M+ + V +L L FIF+ LG+ +FG R + D +P +
Sbjct: 747 ALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLRTDTGDTVP-----DR 801
Query: 59 AHFSNFGMAFLTLFRV 74
+F + A +T+F++
Sbjct: 802 KNFDSLLWAIVTVFQI 817
>sp|O43497|CAC1G_HUMAN Voltage-dependent T-type calcium channel subunit alpha-1G OS=Homo
sapiens GN=CACNA1G PE=2 SV=3
Length = 2377
Score = 103 bits (257), Expect = 4e-22, Method: Composition-based stats.
Identities = 62/74 (83%), Positives = 65/74 (87%)
Query: 1 MAKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAH 60
MA G+RALLDTVMQALPQVGNLGLLF LLFFIFAALGVELFG LEC + PC+GLG HA
Sbjct: 1725 MAVGMRALLDTVMQALPQVGNLGLLFMLLFFIFAALGVELFGDLECDETHPCEGLGRHAT 1784
Query: 61 FSNFGMAFLTLFRV 74
F NFGMAFLTLFRV
Sbjct: 1785 FRNFGMAFLTLFRV 1798
Score = 38.5 bits (88), Expect = 0.017, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 17/87 (19%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELF----------------GRLE 45
A+G++ +++T+M +L +GN+ ++ F IF LGV+LF + +
Sbjct: 1395 AQGLKLVVETLMSSLKPIGNIVVICCAFFIIFGILGVQLFKGKFFVCQGEDTRNITNKSD 1454
Query: 46 CSDELPCQGLGEHAHFSNFGMAFLTLF 72
C+ E + + +F N G A ++LF
Sbjct: 1455 CA-EASYRWVRHKYNFDNLGQALMSLF 1480
Score = 33.5 bits (75), Expect = 0.54, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 9 LDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHFSNFGMAF 68
L +M+ + V +L L FIF+ LG+ LFG + + E L + +F + A
Sbjct: 855 LVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFG-CKFASERDGDTLPDRKNFDSLLWAI 913
Query: 69 LTLFRV 74
+T+F++
Sbjct: 914 VTVFQI 919
>sp|O54898|CAC1G_RAT Voltage-dependent T-type calcium channel subunit alpha-1G OS=Rattus
norvegicus GN=Cacna1g PE=2 SV=2
Length = 2254
Score = 101 bits (251), Expect = 2e-21, Method: Composition-based stats.
Identities = 61/74 (82%), Positives = 64/74 (86%)
Query: 1 MAKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAH 60
MA G+RALL TVMQALPQVGNLGLLF LLFFIFAALGVELFG LEC + PC+GLG HA
Sbjct: 1693 MAVGMRALLHTVMQALPQVGNLGLLFMLLFFIFAALGVELFGDLECDETHPCEGLGRHAT 1752
Query: 61 FSNFGMAFLTLFRV 74
F NFGMAFLTLFRV
Sbjct: 1753 FRNFGMAFLTLFRV 1766
Score = 38.9 bits (89), Expect = 0.015, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 17/87 (19%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELF----------------GRLE 45
A+G++ +++T+M +L +GN+ ++ F IF LGV+LF + +
Sbjct: 1374 AQGLKLVVETLMSSLKPIGNIVVICCAFFIIFGILGVQLFKGKFFVCQGEDTRNITNKSD 1433
Query: 46 CSDELPCQGLGEHAHFSNFGMAFLTLF 72
C+ E + + +F N G A ++LF
Sbjct: 1434 CA-EASYRWVRHKYNFDNLGQALMSLF 1459
Score = 33.9 bits (76), Expect = 0.48, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 9 LDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHFSNFGMAF 68
L +M+ + V +L L FIF+ LG+ LFG + + E L + +F + A
Sbjct: 856 LVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFG-CKFASERDGDTLPDRKNFDSLLWAI 914
Query: 69 LTLFRV 74
+T+F++
Sbjct: 915 VTVFQI 920
>sp|Q9UI33|SCNBA_HUMAN Sodium channel protein type 11 subunit alpha OS=Homo sapiens
GN=SCN11A PE=1 SV=2
Length = 1791
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
A+GIR LL +M +LP + N+GLL FL+ FI+A LG+ F ++ P G+ + +F
Sbjct: 1480 ARGIRTLLFALMMSLPSLFNIGLLLFLIMFIYAILGMNWFSKVN-----PESGIDDIFNF 1534
Query: 62 SNFGMAFLTLFRVDMDMDKS---SHMDKSSHMDKSSHKDTHLHSI 103
F + L LF++ S M +S SS ++ HL I
Sbjct: 1535 KTFASSMLCLFQISTSAGWDSLLSPMLRSKESCNSSSENCHLPGI 1579
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELP--CQGLG------ 56
+ L+ + ++ +G+L ++ ++ FIF+ +G++LFGR S + P C G
Sbjct: 687 LNTLIKIIGNSVGALGSLTVVLVIVIFIFSVVGMQLFGRSFNSQKSPKLCNPTGPTVSCL 746
Query: 57 EHAHFSNFGMAFLTLFRV 74
H H +F +FL +FR+
Sbjct: 747 RHWHMGDFWHSFLVVFRI 764
>sp|Q15858|SCN9A_HUMAN Sodium channel protein type 9 subunit alpha OS=Homo sapiens GN=SCN9A
PE=1 SV=3
Length = 1988
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FI+A G+ F ++ D G+ + +F
Sbjct: 1627 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKED-----GINDMFNF 1681
Query: 62 SNFGMAFLTLFRV 74
FG + + LF++
Sbjct: 1682 ETFGNSMICLFQI 1694
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRL--ECSDELPCQGLGEHAHFS 62
+ L+ + ++ +GNL L+ ++ FIFA +G++LFG+ EC ++ H +
Sbjct: 852 LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINDDCTLPRWHMN 911
Query: 63 NFGMAFLTLFRV 74
+F +FL +FRV
Sbjct: 912 DFFHSFLIVFRV 923
Score = 32.7 bits (73), Expect = 0.92, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 27/40 (67%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG 42
+G+R +++ ++ A+P + N+ L+ + + IF+ +GV LF
Sbjct: 1305 EGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFA 1344
>sp|Q62968|SCNAA_RAT Sodium channel protein type 10 subunit alpha OS=Rattus norvegicus
GN=Scn10a PE=1 SV=1
Length = 1956
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FI++ G+ F + DE G+ + +F
Sbjct: 1591 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMASFANV--VDE---AGIDDMFNF 1645
Query: 62 SNFGMAFLTLFRV 74
FG + L LF++
Sbjct: 1646 KTFGNSMLCLFQI 1658
Score = 34.7 bits (78), Expect = 0.24, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 27/40 (67%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG 42
+G+R ++D ++ A+P + N+ L+ + + IF+ +GV LF
Sbjct: 1266 EGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFA 1305
Score = 30.8 bits (68), Expect = 3.9, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 13/78 (16%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHA----- 59
+ L+ + ++ +GNL + ++ FIFA +G +L S++ C+ G
Sbjct: 772 LNTLIKIIGNSVGALGNLTFILAIIVFIFALVGKQLL-----SEDYGCRKDGVSVWNGEK 826
Query: 60 ---HFSNFGMAFLTLFRV 74
H +F +FL +FR+
Sbjct: 827 LRWHMCDFFHSFLVVFRI 844
>sp|Q6QIY3|SCNAA_MOUSE Sodium channel protein type 10 subunit alpha OS=Mus musculus
GN=Scn10a PE=1 SV=2
Length = 1958
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FI++ G+ F + DE G+ + +F
Sbjct: 1591 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMASFANV--IDE---AGIDDMFNF 1645
Query: 62 SNFGMAFLTLFRV 74
FG + L LF++
Sbjct: 1646 KTFGNSMLCLFQI 1658
Score = 35.0 bits (79), Expect = 0.23, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 27/40 (67%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG 42
+G+R ++D ++ A+P + N+ L+ + + IF+ +GV LF
Sbjct: 1266 EGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFA 1305
>sp|O88420|SCN8A_RAT Sodium channel protein type 8 subunit alpha OS=Rattus norvegicus
GN=Scn8a PE=1 SV=1
Length = 1978
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FIF+ G+ F ++ G+ + +F
Sbjct: 1632 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHE-----AGIDDMFNF 1686
Query: 62 SNFGMAFLTLFRV 74
FG + + LF++
Sbjct: 1687 ETFGNSMICLFQI 1699
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGR--LECSDELPCQGLGEHAHFS 62
+ L+ + ++ +GNL L+ ++ FIFA +G++LFG+ EC ++ + H +
Sbjct: 859 LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINQECKLPRWHMN 918
Query: 63 NFGMAFLTLFRV 74
+F +FL +FRV
Sbjct: 919 DFFHSFLIVFRV 930
Score = 33.1 bits (74), Expect = 0.85, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 27/40 (67%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG 42
+G+R +++ ++ A+P + N+ L+ + + IF+ +GV LF
Sbjct: 1309 EGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFA 1348
>sp|Q9WTU3|SCN8A_MOUSE Sodium channel protein type 8 subunit alpha OS=Mus musculus GN=Scn8a
PE=1 SV=1
Length = 1978
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FIF+ G+ F ++ G+ + +F
Sbjct: 1632 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHE-----AGIDDMFNF 1686
Query: 62 SNFGMAFLTLFRV 74
FG + + LF++
Sbjct: 1687 ETFGNSMICLFQI 1699
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGR--LECSDELPCQGLGEHAHFS 62
+ L+ + ++ +GNL L+ ++ FIFA +G++LFG+ EC ++ + H +
Sbjct: 859 LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKISQECKLPRWHMN 918
Query: 63 NFGMAFLTLFRV 74
+F +FL +FRV
Sbjct: 919 DFFHSFLIVFRV 930
Score = 33.1 bits (74), Expect = 0.82, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 27/99 (27%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELF-GRL---------------EC 46
+G+R +++ ++ A+P + N+ L+ + + IF+ +GV LF G+ E
Sbjct: 1309 EGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEIRFEIDEV 1368
Query: 47 SDELPCQGLGE-----------HAHFSNFGMAFLTLFRV 74
+++ C+ L E +F N G +L L +V
Sbjct: 1369 NNKTDCEKLMEGNNTEIRWKNVKINFDNVGAGYLALLQV 1407
>sp|Q9UQD0|SCN8A_HUMAN Sodium channel protein type 8 subunit alpha OS=Homo sapiens GN=SCN8A
PE=1 SV=1
Length = 1980
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FIF+ G+ F ++ G+ + +F
Sbjct: 1634 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHE-----AGIDDMFNF 1688
Query: 62 SNFGMAFLTLFRV 74
FG + + LF++
Sbjct: 1689 ETFGNSMICLFQI 1701
Score = 39.3 bits (90), Expect = 0.011, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGR--LECSDELPCQGLGEHAHFS 62
+ L+ + ++ +GNL L+ ++ FIFA +G++LFG+ EC ++ H
Sbjct: 861 LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINQDCELPRWHMH 920
Query: 63 NFGMAFLTLFRV 74
+F +FL +FRV
Sbjct: 921 DFFHSFLIVFRV 932
Score = 34.3 bits (77), Expect = 0.33, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 27/99 (27%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG-------------RLECSD- 48
+G+R +++ ++ A+P + N+ L+ + + IF+ +GV LF R E D
Sbjct: 1311 EGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEIRFEIEDV 1370
Query: 49 --ELPCQGLGE-----------HAHFSNFGMAFLTLFRV 74
+ C+ L E +F N G +L L +V
Sbjct: 1371 NNKTECEKLMEGNNTEIRWKNVKINFDNVGAGYLALLQV 1409
>sp|O08562|SCN9A_RAT Sodium channel protein type 9 subunit alpha OS=Rattus norvegicus
GN=Scn9a PE=1 SV=1
Length = 1984
Score = 52.8 bits (125), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FI+A G+ F ++ G+ + +F
Sbjct: 1625 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKE-----AGINDMFNF 1679
Query: 62 SNFGMAFLTLFRV 74
FG + + LF++
Sbjct: 1680 ETFGNSMICLFQI 1692
Score = 40.8 bits (94), Expect = 0.004, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGR--LECSDELPCQGLGEHAHFS 62
+ L+ + ++ +GNL L+ ++ FIFA +G++LFG+ EC ++ H +
Sbjct: 851 LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINVDCKLPRWHMN 910
Query: 63 NFGMAFLTLFRV 74
+F +FL +FRV
Sbjct: 911 DFFHSFLIVFRV 922
Score = 33.1 bits (74), Expect = 0.85, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 27/40 (67%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG 42
+G+R +++ ++ A+P + N+ L+ + + IF+ +GV LF
Sbjct: 1303 EGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFA 1342
>sp|Q62205|SCN9A_MOUSE Sodium channel protein type 9 subunit alpha OS=Mus musculus GN=Scn9a
PE=1 SV=2
Length = 1984
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FI+A G+ F ++ G+ + +F
Sbjct: 1625 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKE-----AGINDMFNF 1679
Query: 62 SNFGMAFLTLFRV 74
FG + + LF++
Sbjct: 1680 ETFGNSMICLFQI 1692
Score = 39.7 bits (91), Expect = 0.009, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGR--LECSDELPCQGLGEHAHFS 62
+ L+ + ++ +GNL L+ ++ FIFA +G++LFG+ EC ++ H +
Sbjct: 851 LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINENCKLPRWHMN 910
Query: 63 NFGMAFLTLFRV 74
+F +FL +FRV
Sbjct: 911 DFFHSFLIVFRV 922
Score = 33.1 bits (74), Expect = 0.87, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 27/40 (67%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG 42
+G+R +++ ++ A+P + N+ L+ + + IF+ +GV LF
Sbjct: 1303 EGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFA 1342
>sp|Q2XVR7|SC4AA_TAKRU Sodium channel protein type 4 subunit alpha A OS=Takifugu rubripes
GN=scn4aa PE=3 SV=1
Length = 1892
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
A+GIR LL +M +LP + N+GLL FL+ FIF+ G+ F ++ G+ + +F
Sbjct: 1505 ARGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKE-----AGINDMFNF 1559
Query: 62 SNFGMAFLTLFRV 74
FG + + LF++
Sbjct: 1560 ETFGSSIICLFQI 1572
Score = 39.3 bits (90), Expect = 0.011, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGR--LECSDELPCQGLGEHAHFS 62
+ L+ + ++ +GNL L+ ++ FIFA +G++LFG+ +C ++ H +
Sbjct: 720 LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKISSDCELPRWHMN 779
Query: 63 NFGMAFLTLFRV 74
+F +FL +FR+
Sbjct: 780 DFFHSFLIVFRI 791
Score = 33.1 bits (74), Expect = 0.86, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 27/40 (67%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG 42
+G+R +++ ++ A+P + N+ L+ + + IF+ +GV LF
Sbjct: 1183 EGMRVVVNALIGAIPSIFNVLLVCLIFWLIFSIMGVNLFA 1222
>sp|P08104|SCN3A_RAT Sodium channel protein type 3 subunit alpha OS=Rattus norvegicus
GN=Scn3a PE=1 SV=1
Length = 1951
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FI+A G+ F ++ G+ + +F
Sbjct: 1589 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKE-----AGIDDMFNF 1643
Query: 62 SNFGMAFLTLFRV 74
FG + + LF++
Sbjct: 1644 ETFGNSMICLFQI 1656
Score = 40.8 bits (94), Expect = 0.004, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGR--LECSDELPCQGLGEHAHFS 62
+ L+ + ++ +GNL L+ ++ FIFA +G++LFG+ EC ++ H +
Sbjct: 819 LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINVDCKLPRWHMN 878
Query: 63 NFGMAFLTLFRV 74
+F +FL +FRV
Sbjct: 879 DFFHSFLIVFRV 890
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 23/95 (24%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELF-GRL---------------EC 46
+G+R +++ ++ A+P + N+ L+ + + IF+ +GV LF G+ E
Sbjct: 1270 EGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGNMFEIKEV 1329
Query: 47 SDELPCQGLGEHA-------HFSNFGMAFLTLFRV 74
++ CQ LG+ A +F N G +L L +V
Sbjct: 1330 NNFSDCQALGKQARWKNVKVNFDNVGAGYLALLQV 1364
>sp|Q28644|SCN9A_RABIT Sodium channel protein type 9 subunit alpha OS=Oryctolagus cuniculus
GN=SCN9A PE=2 SV=1
Length = 1984
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FI+A G+ F ++ G+ + +F
Sbjct: 1624 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKE-----AGINDMFNF 1678
Query: 62 SNFGMAFLTLFRV 74
FG + + LF++
Sbjct: 1679 ETFGNSMICLFQI 1691
Score = 39.3 bits (90), Expect = 0.011, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGR--LECSDELPCQGLGEHAHFS 62
+ L+ + ++ +GNL L+ ++ FIFA +G++LFG+ EC ++ H +
Sbjct: 849 LNMLIKIIGNSVGPLGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINDDCSLPRWHMN 908
Query: 63 NFGMAFLTLFRV 74
+F +FL +FRV
Sbjct: 909 DFFHSFLIVFRV 920
Score = 32.7 bits (73), Expect = 0.89, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 27/40 (67%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG 42
+G+R +++ ++ A+P + N+ L+ + + IF+ +GV LF
Sbjct: 1302 EGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFA 1341
>sp|Q9NY46|SCN3A_HUMAN Sodium channel protein type 3 subunit alpha OS=Homo sapiens GN=SCN3A
PE=1 SV=2
Length = 2000
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FI+A G+ F ++ G+ + +F
Sbjct: 1638 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKE-----AGIDDMFNF 1692
Query: 62 SNFGMAFLTLFRV 74
FG + + LF++
Sbjct: 1693 ETFGNSMICLFQI 1705
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGR--LECSDELPCQGLGEHAHFS 62
+ L+ + ++ +GNL L+ ++ FIFA +G++LFG+ EC ++ H +
Sbjct: 868 LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINDDCTLPRWHMN 927
Query: 63 NFGMAFLTLFRV 74
+F +FL +FRV
Sbjct: 928 DFFHSFLIVFRV 939
Score = 37.7 bits (86), Expect = 0.028, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 23/95 (24%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELF-GRL---------------EC 46
+G+R +++ ++ A+P + N+ L+ + + IF+ +GV LF G+ +
Sbjct: 1319 EGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNMTTGNMFDISDV 1378
Query: 47 SDELPCQGLGEHA-------HFSNFGMAFLTLFRV 74
++ CQ LG+ A +F N G +L L +V
Sbjct: 1379 NNLSDCQALGKQARWKNVKVNFDNVGAGYLALLQV 1413
>sp|Q2XVR5|SC4AA_TETNG Sodium channel protein type 4 subunit alpha A OS=Tetraodon
nigroviridis GN=scn4aa PE=3 SV=2
Length = 1863
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
A+GIR LL +M +LP + N+GLL FL+ FIF+ G+ F ++ G+ + +F
Sbjct: 1485 ARGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKE-----AGIDDMFNF 1539
Query: 62 SNFGMAFLTLFRV 74
FG + + LF++
Sbjct: 1540 ETFGSSIICLFQI 1552
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGR--LECSDELPCQGLGEHAHFS 62
+ L+ + ++ +GNL L+ ++ FIFA +G++LFG+ +C ++ + H +
Sbjct: 700 LNMLIKIIGSSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKISTECELPRWHMN 759
Query: 63 NFGMAFLTLFRV 74
+F +FL +FR+
Sbjct: 760 DFFHSFLIVFRI 771
Score = 33.1 bits (74), Expect = 0.86, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 27/40 (67%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG 42
+G+R +++ ++ A+P + N+ L+ + + IF+ +GV LF
Sbjct: 1163 EGMRVVVNALIGAIPSIFNVLLVCLIFWLIFSIMGVNLFA 1202
>sp|Q2XVR3|SC4AA_DANRE Sodium channel protein type 4 subunit alpha A OS=Danio rerio
GN=scn4aa PE=2 SV=2
Length = 1829
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FIF+ G+ F ++ G+ + +F
Sbjct: 1431 AKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKQ-----AGIDDIFNF 1485
Query: 62 SNFGMAFLTLFRV 74
FG + + LF +
Sbjct: 1486 ETFGGSIICLFEI 1498
Score = 38.1 bits (87), Expect = 0.024, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGR--LECSDELPCQGLGEHAHFS 62
+ L+ + ++ +GNL L+ ++ FIFA +G++LFG+ +C ++ H +
Sbjct: 690 LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKISEDCELPRWHMN 749
Query: 63 NFGMAFLTLFRV 74
+F +FL +FR+
Sbjct: 750 DFFHSFLIVFRI 761
Score = 32.7 bits (73), Expect = 0.97, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 27/40 (67%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG 42
+G+R +++ ++ A+P + N+ L+ + + IF+ +GV LF
Sbjct: 1110 EGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFA 1149
>sp|Q9R053|SCNBA_MOUSE Sodium channel protein type 11 subunit alpha OS=Mus musculus
GN=Scn11a PE=1 SV=2
Length = 1765
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
A+GIR LL +M +LP + N+GLL FL+ FI+A G+ F +++ G+ + +F
Sbjct: 1459 ARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGMNWFSKVKRG-----SGIDDIFNF 1513
Query: 62 SNFGMAFLTLFRV 74
F + L LF++
Sbjct: 1514 DTFSGSMLCLFQI 1526
Score = 33.1 bits (74), Expect = 0.84, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG-RLECSDELPCQGLGEHAHFSN 63
+ L+ + ++ +GNL ++ ++ FIF+ +G+ LFG + + + L H +
Sbjct: 684 LNTLIKIIGHSVGALGNLTVVLTIVVFIFSVVGMRLFGAKFNKTCSTSPESL-RRWHMGD 742
Query: 64 FGMAFLTLFRV 74
F +FL +FR+
Sbjct: 743 FYHSFLVVFRI 753
Score = 32.0 bits (71), Expect = 1.6, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 25/39 (64%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELF 41
+G++ +++ +M A+P + N+ L+ + + IF LGV F
Sbjct: 1141 EGMKVVVNALMSAIPAILNVLLVCLIFWLIFCILGVNFF 1179
>sp|P04775|SCN2A_RAT Sodium channel protein type 2 subunit alpha OS=Rattus norvegicus
GN=Scn2a PE=1 SV=1
Length = 2005
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FI+A G+ F ++ G+ + +F
Sbjct: 1643 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKRE-----VGIDDMFNF 1697
Query: 62 SNFGMAFLTLFRV 74
FG + + LF++
Sbjct: 1698 ETFGNSMICLFQI 1710
Score = 39.3 bits (90), Expect = 0.011, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGR--LECSDELPCQGLGEHAHFS 62
+ L+ + ++ +GNL L+ ++ FIFA +G++LFG+ EC ++ H
Sbjct: 867 LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKISNDCELPRWHMH 926
Query: 63 NFGMAFLTLFRV 74
+F +FL +FRV
Sbjct: 927 HFFHSFLIVFRV 938
Score = 34.3 bits (77), Expect = 0.35, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 26/98 (26%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELF-GRL-EC-------------- 46
+G+R +++ ++ A+P + N+ L+ + + IF+ +GV LF G+ C
Sbjct: 1321 EGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVSVV 1380
Query: 47 SDELPCQGLGE----------HAHFSNFGMAFLTLFRV 74
++ CQ L E +F N G+ +L+L +V
Sbjct: 1381 NNYSECQALIESNQTARWKNVKVNFDNVGLGYLSLLQV 1418
>sp|P04774|SCN1A_RAT Sodium channel protein type 1 subunit alpha OS=Rattus norvegicus
GN=Scn1a PE=2 SV=1
Length = 2009
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FI+A G+ F ++ G+ + +F
Sbjct: 1653 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKRE-----VGIDDMFNF 1707
Query: 62 SNFGMAFLTLFRV 74
FG + + LF++
Sbjct: 1708 ETFGNSMICLFQI 1720
Score = 39.7 bits (91), Expect = 0.008, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGR--LECSDELPCQGLGEHAHFS 62
+ L+ + ++ +GNL L+ ++ FIFA +G++LFG+ +C ++ H +
Sbjct: 876 LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIATDCKLPRWHMN 935
Query: 63 NFGMAFLTLFRV 74
+F +FL +FRV
Sbjct: 936 DFFHSFLIVFRV 947
Score = 33.5 bits (75), Expect = 0.68, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 27/40 (67%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG 42
+G+R +++ ++ A+P + N+ L+ + + IF+ +GV LF
Sbjct: 1331 EGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFA 1370
>sp|P35498|SCN1A_HUMAN Sodium channel protein type 1 subunit alpha OS=Homo sapiens GN=SCN1A
PE=1 SV=2
Length = 2009
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FI+A G+ F ++ G+ + +F
Sbjct: 1653 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKRE-----VGIDDMFNF 1707
Query: 62 SNFGMAFLTLFRV 74
FG + + LF++
Sbjct: 1708 ETFGNSMICLFQI 1720
Score = 39.7 bits (91), Expect = 0.008, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGR--LECSDELPCQGLGEHAHFS 62
+ L+ + ++ +GNL L+ ++ FIFA +G++LFG+ +C ++ H +
Sbjct: 876 LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIASDCQLPRWHMN 935
Query: 63 NFGMAFLTLFRV 74
+F +FL +FRV
Sbjct: 936 DFFHSFLIVFRV 947
Score = 33.5 bits (75), Expect = 0.68, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 27/40 (67%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG 42
+G+R +++ ++ A+P + N+ L+ + + IF+ +GV LF
Sbjct: 1331 EGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFA 1370
>sp|Q99250|SCN2A_HUMAN Sodium channel protein type 2 subunit alpha OS=Homo sapiens GN=SCN2A
PE=1 SV=3
Length = 2005
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FI+A G+ F ++ G+ + +F
Sbjct: 1643 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKRE-----VGIDDMFNF 1697
Query: 62 SNFGMAFLTLFRV 74
FG + + LF++
Sbjct: 1698 ETFGNSMICLFQI 1710
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGR--LECSDELPCQGLGEHAHFS 62
+ L+ + ++ +GNL L+ ++ FIFA +G++LFG+ EC ++ H
Sbjct: 867 LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKISNDCELPRWHMH 926
Query: 63 NFGMAFLTLFRV 74
+F +FL +FRV
Sbjct: 927 DFFHSFLIVFRV 938
Score = 33.1 bits (74), Expect = 0.70, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 27/40 (67%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG 42
+G+R +++ ++ A+P + N+ L+ + + IF+ +GV LF
Sbjct: 1321 EGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFA 1360
>sp|P02719|SCNA_ELEEL Sodium channel protein OS=Electrophorus electricus PE=2 SV=1
Length = 1820
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FIF+ G+ F ++ G+ + +F
Sbjct: 1434 AKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKQG-----GVDDIFNF 1488
Query: 62 SNFGMAFLTLFRV 74
FG + + LF +
Sbjct: 1489 ETFGNSMICLFEI 1501
Score = 36.6 bits (83), Expect = 0.072, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 14/74 (18%)
Query: 8 LLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGR------LECSD--ELPCQGLGEHA 59
L+ + ++ +GNL ++ ++ FIFA +G +LFG+ + SD ELP
Sbjct: 677 LIKIICNSVGALGNLTIVLAIIVFIFALVGFQLFGKNYKEYVCKISDDCELP------RW 730
Query: 60 HFSNFGMAFLTLFR 73
H ++F +FL +FR
Sbjct: 731 HMNDFFHSFLIVFR 744
Score = 31.6 bits (70), Expect = 2.2, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 48/97 (49%), Gaps = 25/97 (25%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELF-GRL-EC----SDE-LPCQGL 55
+G++ ++ ++ A+P + N+ L+ + + IF+ +GV LF G+ C +DE LP + +
Sbjct: 1113 EGMKVVVRALLGAIPSIMNVLLVCLMFWLIFSIMGVNLFAGKFYRCINTTTDEILPVEEV 1172
Query: 56 GEHA------------------HFSNFGMAFLTLFRV 74
+ ++ N GM +L+L +V
Sbjct: 1173 NNRSDCMALMYTNEVRWVNLKVNYDNAGMGYLSLLQV 1209
>sp|Q20JQ7|SC4AB_DANRE Sodium channel protein type 4 subunit alpha B OS=Danio rerio
GN=scn4ab PE=2 SV=1
Length = 1784
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FIF+ G+ F ++ E+ G+ + +F
Sbjct: 1408 AKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVK--KEV---GIDDMMNF 1462
Query: 62 SNFGMAFLTLFRV 74
FG + + +F +
Sbjct: 1463 ETFGNSIICMFMI 1475
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 14/78 (17%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG--------RLECSDELPCQGLG 56
+ L+ + ++ +GNL L+ ++ FIFA +G++LFG ++ ELP
Sbjct: 676 LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYTDSVCKISSDCELP----- 730
Query: 57 EHAHFSNFGMAFLTLFRV 74
H ++F AFL +FRV
Sbjct: 731 -RWHMADFFHAFLIIFRV 747
>sp|P15390|SCN4A_RAT Sodium channel protein type 4 subunit alpha OS=Rattus norvegicus
GN=Scn4a PE=2 SV=1
Length = 1840
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FI++ G+ F ++ G+ + +F
Sbjct: 1458 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKE-----SGIDDMFNF 1512
Query: 62 SNFGMAFLTLFRV 74
FG + + LF +
Sbjct: 1513 ETFGNSIICLFEI 1525
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGR--LECSDELPCQGLGEHAHFS 62
+ L+ + ++ +GNL L+ ++ FIFA +G++LFG+ EC ++ H +
Sbjct: 680 LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIASDCNLPRWHMN 739
Query: 63 NFGMAFLTLFRV 74
+F +FL +FR+
Sbjct: 740 DFFHSFLIVFRI 751
Score = 33.5 bits (75), Expect = 0.58, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 27/40 (67%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG 42
+G+R +++ ++ A+P + N+ L+ + + IF+ +GV LF
Sbjct: 1137 EGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFA 1176
>sp|Q9ER60|SCN4A_MOUSE Sodium channel protein type 4 subunit alpha OS=Mus musculus GN=Scn4a
PE=2 SV=1
Length = 1841
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FI++ G+ F ++ G+ + +F
Sbjct: 1459 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKE-----SGIDDMFNF 1513
Query: 62 SNFGMAFLTLFRV 74
FG + + LF +
Sbjct: 1514 ETFGNSIICLFEI 1526
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGR--LECSDELPCQGLGEHAHFS 62
+ L+ + ++ +GNL L+ ++ FIFA +G++LFG+ EC ++ H
Sbjct: 680 LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIASDCSLPRWHMH 739
Query: 63 NFGMAFLTLFRV 74
+F +FL +FR+
Sbjct: 740 DFFHSFLIVFRI 751
Score = 33.5 bits (75), Expect = 0.58, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 27/40 (67%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG 42
+G+R +++ ++ A+P + N+ L+ + + IF+ +GV LF
Sbjct: 1138 EGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFA 1177
>sp|P35499|SCN4A_HUMAN Sodium channel protein type 4 subunit alpha OS=Homo sapiens GN=SCN4A
PE=1 SV=4
Length = 1836
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FI++ G+ F ++ G+ + +F
Sbjct: 1465 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKE-----SGIDDMFNF 1519
Query: 62 SNFGMAFLTLFRV 74
FG + + LF +
Sbjct: 1520 ETFGNSIICLFEI 1532
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGR----LECSDELPCQGLGEHAH 60
+ L+ + ++ +GNL L+ ++ FIFA +G++LFG+ C L C H H
Sbjct: 686 LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIALDCNLPRWHMH 745
Query: 61 FSNFGMAFLTLFRV 74
+F +FL +FR+
Sbjct: 746 --DFFHSFLIVFRI 757
Score = 34.3 bits (77), Expect = 0.40, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 49/97 (50%), Gaps = 25/97 (25%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELF-GRL---------------EC 46
+G+R +++ ++ A+P + N+ L+ + + IF+ +GV LF G+ E
Sbjct: 1144 EGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERFDISEV 1203
Query: 47 SDELPCQGL---GE------HAHFSNFGMAFLTLFRV 74
+++ C+ L G+ ++ N G+ +L+L +V
Sbjct: 1204 NNKSECESLMHTGQVRWLNVKVNYDNVGLGYLSLLQV 1240
>sp|P22316|CAC1S_CYPCA Dihydropyridine-sensitive L-type skeletal muscle calcium channel
subunit alpha-1 OS=Cyprinus carpio PE=2 SV=1
Length = 1852
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
++GIR LL T +++ + ++GLL +LFFI+A +G+++FG++ D + + +F
Sbjct: 1271 SEGIRNLLWTFIKSFQALPHVGLLIVMLFFIYAVIGMQMFGKVALVDGTE---INRNNNF 1327
Query: 62 SNFGMAFLTLFRV 74
F A L LFRV
Sbjct: 1328 QTFPQAVLLLFRV 1340
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 7/60 (11%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELF-GRL-ECSDEL-----PCQG 54
AKG++ ++ + A+ +GN+ L+ LL F+FA +GV+LF G+L C+D L CQG
Sbjct: 927 AKGLKHVVQCMFVAIKTIGNIVLVTMLLDFMFACIGVQLFKGKLYYCTDPLQKTAEECQG 986
>sp|O88457|SCNBA_RAT Sodium channel protein type 11 subunit alpha OS=Rattus norvegicus
GN=Scn11a PE=1 SV=1
Length = 1765
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
A+GIR LL +M +LP + N+GLL FL+ FI+A G+ F +++ G+ + +F
Sbjct: 1459 ARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGMSWFSKVKKG-----SGIDDIFNF 1513
Query: 62 SNFGMAFLTLFRV 74
F + L LF++
Sbjct: 1514 ETFTGSMLCLFQI 1526
Score = 34.7 bits (78), Expect = 0.28, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG-----RLECSDELPCQGLGEHA 59
+ L+ + ++ +GNL ++ ++ FIF+ +G+ LFG + E P +
Sbjct: 682 LNTLIKIIGHSVGALGNLTVVLTIVVFIFSVVGMRLFGTKFNKTAYATQERPRR----RW 737
Query: 60 HFSNFGMAFLTLFRV 74
H NF +FL +FR+
Sbjct: 738 HMDNFYHSFLVVFRI 752
>sp|Q05973|SCN1_LOLBL Sodium channel protein 1 brain OS=Loligo bleekeri PE=2 SV=1
Length = 1522
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKG+R LL ++ +LP + N+G L L+ FI+ +G+ FG+++ S L + +F
Sbjct: 1214 AKGMRKLLFALVISLPALFNIGALLMLVMFIYTIIGMSSFGQIKLSG-----ALNDQVNF 1268
Query: 62 SNFGMAFLTLFRV 74
FG FL L R+
Sbjct: 1269 QTFGKTFLLLVRL 1281
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 20/92 (21%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELF-GRL--------------ECS 47
+G++ +++ +M ++P + N+ L+ + + IFA +GV+LF G+ E +
Sbjct: 895 QGMKIIVNALMLSIPSIFNVLLVCVVFWLIFAIMGVQLFAGKFYKCVNETNMRIPPTEVA 954
Query: 48 DELPCQG-----LGEHAHFSNFGMAFLTLFRV 74
+++ C + + +F N G AFL LF+V
Sbjct: 955 NKIECYNKNYTWVNSNVNFDNVGGAFLALFQV 986
>sp|P15389|SCN5A_RAT Sodium channel protein type 5 subunit alpha OS=Rattus norvegicus
GN=Scn5a PE=2 SV=1
Length = 2019
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FI++ G+ F ++ G+ + +F
Sbjct: 1642 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFAYVKWE-----AGIDDMFNF 1696
Query: 62 SNFGMAFLTLFRV 74
F + L LF++
Sbjct: 1697 QTFANSMLCLFQI 1709
Score = 43.5 bits (101), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGR--LECSDELPCQGLGEHAHFS 62
+ L+ + ++ +GNL L+ ++ FIFA +G++LFG+ E + GL H
Sbjct: 826 LNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYSELRHRISDSGLLPRWHMM 885
Query: 63 NFGMAFLTLFRV 74
+F AFL +FR+
Sbjct: 886 DFFHAFLIIFRI 897
Score = 33.1 bits (74), Expect = 0.85, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 27/40 (67%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG 42
+G+R +++ ++ A+P + N+ L+ + + IF+ +GV LF
Sbjct: 1320 EGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFA 1359
>sp|Q9JJV9|SCN5A_MOUSE Sodium channel protein type 5 subunit alpha OS=Mus musculus GN=Scn5a
PE=1 SV=2
Length = 2019
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FI++ G+ F ++ G+ + +F
Sbjct: 1642 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFAYVKWE-----AGIDDMFNF 1696
Query: 62 SNFGMAFLTLFRV 74
F + L LF++
Sbjct: 1697 QTFANSMLCLFQI 1709
Score = 43.5 bits (101), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGR--LECSDELPCQGLGEHAHFS 62
+ L+ + ++ +GNL L+ ++ FIFA +G++LFG+ E + GL H
Sbjct: 825 LNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYSELRHRISDSGLLPRWHMM 884
Query: 63 NFGMAFLTLFRV 74
+F AFL +FR+
Sbjct: 885 DFFHAFLIIFRI 896
Score = 33.1 bits (74), Expect = 0.85, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 27/40 (67%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG 42
+G+R +++ ++ A+P + N+ L+ + + IF+ +GV LF
Sbjct: 1320 EGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFA 1359
>sp|Q14524|SCN5A_HUMAN Sodium channel protein type 5 subunit alpha OS=Homo sapiens GN=SCN5A
PE=1 SV=2
Length = 2016
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FI++ G+ F ++ G+ + +F
Sbjct: 1640 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFAYVKWE-----AGIDDMFNF 1694
Query: 62 SNFGMAFLTLFRV 74
F + L LF++
Sbjct: 1695 QTFANSMLCLFQI 1707
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGR----LECSDELPCQGLGEHAH 60
+ L+ + ++ +GNL L+ ++ FIFA +G++LFG+ L SD GL H
Sbjct: 825 LNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYSELRDSD----SGLLPRWH 880
Query: 61 FSNFGMAFLTLFRV 74
+F AFL +FR+
Sbjct: 881 MMDFFHAFLIIFRI 894
Score = 34.3 bits (77), Expect = 0.38, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 26/98 (26%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVEL----FGRL--ECSDELP----- 51
+G+R +++ ++ A+P + N+ L+ + + IF+ +GV L FGR + +LP
Sbjct: 1318 EGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGRCINQTEGDLPLNYTI 1377
Query: 52 ------CQGL---GE------HAHFSNFGMAFLTLFRV 74
C+ L GE +F N G +L L +V
Sbjct: 1378 VNNKSQCESLNLTGELYWTKVKVNFDNVGAGYLALLQV 1415
>sp|Q9Y5Y9|SCNAA_HUMAN Sodium channel protein type 10 subunit alpha OS=Homo sapiens
GN=SCN10A PE=1 SV=2
Length = 1956
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FI++ G+ F + G+ + +F
Sbjct: 1590 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSSFPHVRWE-----AGIDDMFNF 1644
Query: 62 SNFGMAFLTLFRV 74
F + L LF++
Sbjct: 1645 QTFANSMLCLFQI 1657
Score = 35.0 bits (79), Expect = 0.23, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 27/40 (67%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG 42
+G+R ++D ++ A+P + N+ L+ + + IF+ +GV LF
Sbjct: 1265 EGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFA 1304
Score = 30.0 bits (66), Expect = 6.7, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGE---HAHF 61
+ L+ + ++ +GNL ++ ++ F+FA +G +L G ++ E H
Sbjct: 773 LNTLIKIIGNSVGALGNLTIILAIIVFVFALVGKQLLGENYRNNRKNISAPHEDWPRWHM 832
Query: 62 SNFGMAFLTLFRV 74
+F +FL +FR+
Sbjct: 833 HDFFHSFLIVFRI 845
>sp|Q9W0Y8|SCN60_DROME Sodium channel protein 60E OS=Drosophila melanogaster GN=NaCP60E PE=2
SV=5
Length = 2821
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL ++ +LP + N+G L L+ FI+A LG+ LFG ++ L + +F
Sbjct: 2157 AKGIRKLLFALVVSLPALFNIGALLGLITFIYAILGMSLFGNVKLQG-----ALDDMVNF 2211
Query: 62 SNFGMAFLTLFRV 74
FG + LFR+
Sbjct: 2212 QTFGRSMQLLFRL 2224
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 20/92 (21%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG---------------RLECS 47
+G+R +++ +M A+P + N+ L+ + + IF+ +GV+ FG E +
Sbjct: 1839 QGMRIVVNALMYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKFFKCVNEMGELLPITEVN 1898
Query: 48 DELPC-----QGLGEHAHFSNFGMAFLTLFRV 74
D+ C + F + GM +L L +V
Sbjct: 1899 DKWDCIEQNYTWINSKITFDHVGMGYLALLQV 1930
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHFSNF 64
++ LL ++ + +GNL L+ ++ +IFA +G++LF + ++ + +F++F
Sbjct: 795 MKVLLSIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTPEKFDPDPV-PRWNFNDF 853
Query: 65 GMAFLTLFRV 74
+F+ +FR+
Sbjct: 854 FHSFMMIFRI 863
>sp|O46669|SCNAA_CANFA Sodium channel protein type 10 subunit alpha OS=Canis familiaris
GN=SCN10A PE=2 SV=1
Length = 1962
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FI++ G+ F + G+ + +F
Sbjct: 1597 AKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMASFPHVSWE-----AGIDDMFNF 1651
Query: 62 SNFGMAFLTLFRV 74
F + L LF++
Sbjct: 1652 QTFANSMLCLFQI 1664
Score = 33.9 bits (76), Expect = 0.43, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 26/40 (65%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG 42
+G+R ++D ++ A+P + N+ L+ + + IF+ +GV F
Sbjct: 1272 EGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSTMGVNFFA 1311
Score = 30.4 bits (67), Expect = 4.9, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEH---AHF 61
+ L+ + ++ +GNL ++ ++ F+FA +G +L G + E H
Sbjct: 782 LNTLIKIIGNSVGALGNLTIILAIIVFVFALVGKQLLGENYRDNRRNISAPNEEWPRWHM 841
Query: 62 SNFGMAFLTLFRV 74
+F +FL +FR+
Sbjct: 842 HDFFHSFLIVFRI 854
Score = 30.4 bits (67), Expect = 5.5, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 4 GIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELF-GRLECSDELPCQGLGEHAHFS 62
G++ ++ ++ ++ ++ ++ +L +FA +G++LF G L+ C L E ++S
Sbjct: 231 GLKVIVGALIHSVRKLADVTILTVFCLSVFALVGLQLFKGNLKNKCVKNCAALNETGNYS 290
Query: 63 NFG 65
++G
Sbjct: 291 SYG 293
>sp|Q2XVR6|SC4AB_TAKRU Sodium channel protein type 4 subunit alpha B OS=Takifugu rubripes
GN=scn4ab PE=3 SV=1
Length = 1719
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FIF+ G+ F ++ + L + + +F
Sbjct: 1354 AKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVK-KEAL----IDDMFNF 1408
Query: 62 SNFGMAFLTLFRV 74
FG + + LF +
Sbjct: 1409 ETFGNSMICLFMI 1421
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGR--LECSDELPCQGLGEHAHFS 62
+ L+ + ++ +GNL L+ ++ FIFA +G++LFG+ +C + + H +
Sbjct: 621 LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKDCVCRISEDCVLPRWHMN 680
Query: 63 NFGMAFLTLFRV 74
+F AFL +FRV
Sbjct: 681 DFFHAFLIIFRV 692
Score = 32.3 bits (72), Expect = 1.2, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 27/40 (67%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG 42
+G+R +++ ++ A+P + N+ L+ + + IF+ +GV LF
Sbjct: 1031 EGMRVVVNALVGAVPSIFNVLLVCLIFWLIFSIMGVNLFA 1070
>sp|Q2XVR4|SC4AB_TETNG Sodium channel protein type 4 subunit alpha B OS=Tetraodon
nigroviridis GN=scn4ab PE=3 SV=1
Length = 1715
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL FL+ FIF+ G+ F ++ + + +F
Sbjct: 1350 AKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKE-----AMIDDMFNF 1404
Query: 62 SNFGMAFLTLFRV 74
FG + + LF +
Sbjct: 1405 ETFGNSMICLFMI 1417
Score = 40.0 bits (92), Expect = 0.007, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGR--LECSDELPCQGLGEHAHFS 62
+ L+ + ++ +GNL L+ ++ FIFA +G++LFG+ +C + H +
Sbjct: 623 LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKDCVCRISEDCKLPRWHMN 682
Query: 63 NFGMAFLTLFRV 74
+F AFL +FRV
Sbjct: 683 DFFHAFLIIFRV 694
Score = 32.3 bits (72), Expect = 1.2, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 27/40 (67%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG 42
+G+R +++ ++ A+P + N+ L+ + + IF+ +GV LF
Sbjct: 1027 EGMRVVVNALVGAVPSIFNVLLVCLIFWLIFSIMGVNLFA 1066
>sp|Q28371|SCN4A_HORSE Sodium channel protein type 4 subunit alpha OS=Equus caballus
GN=SCN4A PE=1 SV=1
Length = 1834
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL +M +LP + N+GLL L+ FI++ G+ F ++ G+ + +F
Sbjct: 1462 AKGIRTLLFALMMSLPALFNIGLLLILVMFIYSIFGMSNFAYVKKE-----SGIDDMFNF 1516
Query: 62 SNFGMAFLTLFRV 74
FG + + LF +
Sbjct: 1517 ETFGNSIICLFEI 1529
Score = 33.1 bits (74), Expect = 0.84, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 27/40 (67%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG 42
+G+R +++ ++ A+P + N+ L+ + + IF+ +GV LF
Sbjct: 1141 EGMRVVVNALLGAIPSIMNVLLVCLIFWVIFSIMGVNLFA 1180
>sp|P35500|SCNA_DROME Sodium channel protein para OS=Drosophila melanogaster GN=para PE=2
SV=3
Length = 2131
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
AKGIR LL + +LP + N+ LL FL+ FIFA G+ F ++ G+ + +F
Sbjct: 1731 AKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKEK-----SGINDVYNF 1785
Query: 62 SNFGMAFLTLFRV 74
FG + + LF++
Sbjct: 1786 KTFGQSMILLFQM 1798
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 20/92 (21%)
Query: 3 KGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFG--RLECSDE---------LP 51
+G+R +++ ++QA+P + N+ L+ + + IFA +GV+LF +C D +P
Sbjct: 1414 QGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCEDMNGTKLSHEIIP 1473
Query: 52 ----CQG-----LGEHAHFSNFGMAFLTLFRV 74
C+ + +F + G A+L LF+V
Sbjct: 1474 NRNACESENYTWVNSAMNFDHVGNAYLCLFQV 1505
Score = 39.3 bits (90), Expect = 0.012, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 8 LLDTVM-QALPQVGNLGLLFFLLFFIFAALGVELFGR--LECSDELPCQGLGEHAHFSNF 64
LL ++M + + +GNL + ++ FIFA +G++LFG+ + D P G +F++F
Sbjct: 928 LLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHKDRFP-DGDLPRWNFTDF 986
Query: 65 GMAFLTLFRV 74
+F+ +FRV
Sbjct: 987 MHSFMIVFRV 996
>sp|P56699|CAC1E_DIPOM Probable voltage-dependent R-type calcium channel subunit alpha-1E
OS=Diplobatis ommata PE=2 SV=1
Length = 2223
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHFSNF 64
IR LL T +Q+ + + LL +LFFI+A +G++LFG + D P + H +F F
Sbjct: 1541 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQLFGNIGLDDHTP---INRHNNFHTF 1597
Query: 65 GMAFLTLFR 73
A + LFR
Sbjct: 1598 FNALMLLFR 1606
Score = 33.5 bits (75), Expect = 0.64, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 5 IRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELF 41
++A+ D V+ +L V N+ +++ L FIFA + V+LF
Sbjct: 1227 LKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLF 1263
>sp|P15381|CAC1C_RABIT Voltage-dependent L-type calcium channel subunit alpha-1C
OS=Oryctolagus cuniculus GN=CACNA1C PE=1 SV=1
Length = 2171
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
+GIR LL T +++ + + LL +LFFI+A +G+++FG++ +D + + +F
Sbjct: 1373 GEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALNDTTE---INRNNNF 1429
Query: 62 SNFGMAFLTLFR 73
F A L LFR
Sbjct: 1430 QTFPQAVLLLFR 1441
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 7/60 (11%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELF-GRL-ECSD-----ELPCQG 54
AKG++ ++ V A+ +GN+ ++ LL F+FA +GV+LF G+L CSD E C+G
Sbjct: 1042 AKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGKLYTCSDSSKQTEAECKG 1101
>sp|Q13936|CAC1C_HUMAN Voltage-dependent L-type calcium channel subunit alpha-1C OS=Homo
sapiens GN=CACNA1C PE=1 SV=4
Length = 2221
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
+GIR LL T +++ + + LL +LFFI+A +G+++FG++ +D + + +F
Sbjct: 1391 GEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALNDTTE---INRNNNF 1447
Query: 62 SNFGMAFLTLFR 73
F A L LFR
Sbjct: 1448 QTFPQAVLLLFR 1459
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 7/60 (11%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELF-GRL-ECSD-----ELPCQG 54
AKG++ ++ V A+ +GN+ ++ LL F+FA +GV+LF G+L CSD E C+G
Sbjct: 1032 AKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGKLYTCSDSSKQTEAECKG 1091
>sp|P07293|CAC1S_RABIT Voltage-dependent L-type calcium channel subunit alpha-1S
OS=Oryctolagus cuniculus GN=CACNA1S PE=1 SV=1
Length = 1873
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
A+G+R LL T +++ + + LL +LFFI+A +G+++FG++ D + + +F
Sbjct: 1250 AEGVRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQMFGKIALVDG---TQINRNNNF 1306
Query: 62 SNFGMAFLTLFR 73
F A L LFR
Sbjct: 1307 QTFPQAVLLLFR 1318
Score = 38.1 bits (87), Expect = 0.025, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 27/100 (27%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELF-GR-LECSD-----ELPCQG 54
AKG++ ++ V A+ +GN+ L+ LL F+FA +GV+LF G+ C+D E C+G
Sbjct: 911 AKGLKHVVQCVFVAIRTIGNIVLVTTLLQFMFACIGVQLFKGKFFSCNDLSKMTEEECRG 970
Query: 55 --------------------LGEHAHFSNFGMAFLTLFRV 74
+ HF N A ++LF V
Sbjct: 971 YYYVYKDGDPTQMELRPRQWIHNDFHFDNVLSAMMSLFTV 1010
>sp|Q13698|CAC1S_HUMAN Voltage-dependent L-type calcium channel subunit alpha-1S OS=Homo
sapiens GN=CACNA1S PE=1 SV=4
Length = 1873
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELFGRLECSDELPCQGLGEHAHF 61
A+G+R LL T +++ + + LL +LFFI+A +G+++FG++ D + + +F
Sbjct: 1250 AEGVRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQMFGKIALVDG---TQINRNNNF 1306
Query: 62 SNFGMAFLTLFR 73
F A L LFR
Sbjct: 1307 QTFPQAVLLLFR 1318
Score = 37.4 bits (85), Expect = 0.036, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 7/60 (11%)
Query: 2 AKGIRALLDTVMQALPQVGNLGLLFFLLFFIFAALGVELF-GR-LECSD-----ELPCQG 54
AKG++ ++ + A+ +GN+ L+ LL F+FA +GV+LF G+ C+D E C+G
Sbjct: 911 AKGLKHVVQCMFVAISTIGNIVLVTTLLQFMFACIGVQLFKGKFFRCTDLSKMTEEECRG 970
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,008,423
Number of Sequences: 539616
Number of extensions: 2132979
Number of successful extensions: 11376
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 150
Number of HSP's that attempted gapping in prelim test: 10019
Number of HSP's gapped (non-prelim): 1413
length of query: 162
length of database: 191,569,459
effective HSP length: 108
effective length of query: 54
effective length of database: 133,290,931
effective search space: 7197710274
effective search space used: 7197710274
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)