BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6932
(150 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|114051175|ref|NP_001040389.1| signal recognition particle 19 kDa protein [Bombyx mori]
gi|95102718|gb|ABF51300.1| signal recognition particle 19 kDa protein [Bombyx mori]
Length = 148
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/135 (60%), Positives = 104/135 (77%), Gaps = 1/135 (0%)
Query: 7 KKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKL 66
KKH+DVERW+CIYPAY+N KKTLAEGRR+PK+ V+NPT+++I DVL TGL+ +ENKL
Sbjct: 12 KKHSDVERWICIYPAYLNSKKTLAEGRRLPKSVCVENPTHQEIRDVLLATGLRVGVENKL 71
Query: 67 YPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQ 126
Y RE SKE RGR RVQ+KNDDG+PVNP+FPTRE+VM ++G IPKLK+RQ + +Q
Sbjct: 72 YSRECSKEMLYRGRIRVQIKNDDGAPVNPEFPTRESVMKYIGESIPKLKTRQNRPV-EQQ 130
Query: 127 NQQRDLSGGGGGGKK 141
Q + + GKK
Sbjct: 131 PQPTNQAISKAKGKK 145
>gi|442762437|gb|JAA73377.1| Putative signal recognition particle subunit srp19, partial [Ixodes
ricinus]
Length = 150
Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 80/129 (62%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Query: 2 ATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYH 61
A + +K+H+D ERWVC+ PAYIN KKTLAEGRR+P++K V+NPTY++I DVL TG K
Sbjct: 2 AYLASKQHSDRERWVCLCPAYINSKKTLAEGRRLPRSKCVENPTYQEIRDVLDATGFKVG 61
Query: 62 IENKLYPREISKEHFV-RGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK 120
+ENKLYPRE +K+ + RGR RVQLKNDD +PVNP +PTR+AVMLH+ +IP+LKSR +
Sbjct: 62 VENKLYPREQNKDSLLYRGRIRVQLKNDDETPVNPQYPTRKAVMLHVCDMIPRLKSRTQR 121
Query: 121 QANSEQNQQ 129
QA EQ Q
Sbjct: 122 QAGGEQASQ 130
>gi|149689198|gb|ABR27967.1| signal recognition particle [Triatoma infestans]
Length = 148
Score = 171 bits (433), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 78/114 (68%), Positives = 95/114 (83%)
Query: 7 KKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKL 66
K+++D ERW+CIYPAYIN KKTLAEGRR+PK KA++NPTY++I DVLS G+K +ENK+
Sbjct: 8 KQYSDRERWICIYPAYINSKKTLAEGRRVPKDKAIENPTYQEIRDVLSAAGMKVGVENKM 67
Query: 67 YPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK 120
Y RE SKE GR RVQLKNDDG+P+N DFPTR +VMLHL +IPKLK+RQGK
Sbjct: 68 YSRERSKELLYIGRIRVQLKNDDGTPLNSDFPTRNSVMLHLCTMIPKLKTRQGK 121
>gi|427786499|gb|JAA58701.1| Putative signal recognition particle protein 19 [Rhipicephalus
pulchellus]
Length = 152
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 101/129 (78%), Gaps = 1/129 (0%)
Query: 2 ATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYH 61
A + +K+H+D ERWVCIYPAYIN KKTLAEGRR+PK++ V+NPTY++I DVL TG K
Sbjct: 4 AYLASKQHSDRERWVCIYPAYINSKKTLAEGRRLPKSQCVENPTYQEIRDVLDATGFKVG 63
Query: 62 IENKLYPREISKEHFV-RGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK 120
+ENKLYPRE +K+ + RGR RVQLKNDD +P NP +PTR+A+M H+ +IP+LK+R +
Sbjct: 64 VENKLYPREQNKDSLLYRGRIRVQLKNDDSTPCNPQYPTRKALMHHICDMIPRLKTRTQR 123
Query: 121 QANSEQNQQ 129
Q ++Q Q
Sbjct: 124 QGGADQQAQ 132
>gi|91077040|ref|XP_967879.1| PREDICTED: similar to signal recognition particle [Tribolium
castaneum]
gi|270001745|gb|EEZ98192.1| hypothetical protein TcasGA2_TC000621 [Tribolium castaneum]
Length = 152
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/114 (67%), Positives = 92/114 (80%)
Query: 7 KKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKL 66
KKH+D ERW+CIYPAYIN KKT+A+GRRI K K V+NPT++++ DVLS GL+ +ENKL
Sbjct: 16 KKHSDRERWICIYPAYINSKKTVAQGRRIAKEKCVENPTHQEMRDVLSAAGLQVGVENKL 75
Query: 67 YPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK 120
Y RE SKE RGR R+QLK DDG+PVN DFPTRE+VMLHL +IPKLK RQ K
Sbjct: 76 YSRERSKELLYRGRIRIQLKKDDGTPVNKDFPTRESVMLHLCEMIPKLKIRQNK 129
>gi|357616155|gb|EHJ70039.1| signal recognition particle 19 kDa protein [Danaus plexippus]
Length = 148
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/135 (59%), Positives = 102/135 (75%), Gaps = 1/135 (0%)
Query: 7 KKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKL 66
KKHTD++RW+CIYPAY+N KKTLAEGR++P+ V+NPT+++I DVL TTGL+ +ENKL
Sbjct: 12 KKHTDLQRWICIYPAYLNSKKTLAEGRKLPRDICVENPTHQEIRDVLFTTGLRIGVENKL 71
Query: 67 YPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQ 126
YPRE SKE RGR RV+LKNDDG+P+ ++PTREAVM H+ IPKLK+RQ + A +Q
Sbjct: 72 YPRERSKEMLYRGRIRVELKNDDGTPIKDEYPTREAVMRHIVESIPKLKTRQNRPA-EQQ 130
Query: 127 NQQRDLSGGGGGGKK 141
Q S GKK
Sbjct: 131 PQAVQQSSNKSKGKK 145
>gi|156549036|ref|XP_001607942.1| PREDICTED: signal recognition particle 19 kDa protein-like isoform
1 [Nasonia vitripennis]
Length = 147
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 77/120 (64%), Positives = 96/120 (80%)
Query: 6 TKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENK 65
TK H+D ERW+CIYPAYIN KK+LAEGR++ K K V+NPT+++I DVL + GL +ENK
Sbjct: 8 TKNHSDRERWICIYPAYINSKKSLAEGRKLTKEKCVENPTHQEIRDVLLSVGLNVGVENK 67
Query: 66 LYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSE 125
L+PRE SKE RGR RVQLKN+DG+P NPDFP+R++++ LG IPKLKSRQGKQA E
Sbjct: 68 LHPRERSKELLYRGRIRVQLKNNDGTPFNPDFPSRDSLLSFLGTNIPKLKSRQGKQAAGE 127
>gi|383862491|ref|XP_003706717.1| PREDICTED: signal recognition particle 19 kDa protein-like
[Megachile rotundata]
Length = 163
Score = 164 bits (416), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 74/129 (57%), Positives = 98/129 (75%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
+A +KKH+D ERW+CIYP Y+N K+TLA GR++ K K V+NPT+++I DVL G
Sbjct: 20 LAWNSSKKHSDRERWICIYPVYLNSKRTLAGGRKLAKDKCVENPTHQEIRDVLVAAGFNV 79
Query: 61 HIENKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK 120
+ENKL+PRE SKE RGR RVQLKNDDG+PV P+FP+R++V+ ++G IPKLK+RQGK
Sbjct: 80 GVENKLHPRERSKELLYRGRIRVQLKNDDGTPVKPEFPSRDSVLAYIGTTIPKLKTRQGK 139
Query: 121 QANSEQNQQ 129
Q EQ+ Q
Sbjct: 140 QTTGEQSAQ 148
>gi|380024212|ref|XP_003695899.1| PREDICTED: signal recognition particle 19 kDa protein-like [Apis
florea]
Length = 159
Score = 164 bits (416), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 74/124 (59%), Positives = 97/124 (78%)
Query: 6 TKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENK 65
+KKH+D ERW+CIYP Y+N K+TLAEGR++ K K V+NPT+++I DVL G +ENK
Sbjct: 21 SKKHSDRERWICIYPVYLNSKRTLAEGRKLAKDKCVENPTHQEIRDVLVAAGFNVGVENK 80
Query: 66 LYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSE 125
L+PRE SKE RGR RVQLKNDDG+PV P+FPTR++V+ ++G IPKLK+RQGK ++ E
Sbjct: 81 LHPRERSKELLYRGRIRVQLKNDDGTPVKPEFPTRDSVLAYVGTTIPKLKTRQGKHSSGE 140
Query: 126 QNQQ 129
Q Q
Sbjct: 141 QFSQ 144
>gi|346469265|gb|AEO34477.1| hypothetical protein [Amblyomma maculatum]
Length = 152
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/127 (59%), Positives = 99/127 (77%), Gaps = 1/127 (0%)
Query: 4 IDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE 63
+ +K+++D ERW+CIYPAYIN KKTLAEGRR+PK+K V+NPTY++I DVL TG K +E
Sbjct: 6 LASKQNSDRERWICIYPAYINSKKTLAEGRRLPKSKCVENPTYQEIRDVLDATGFKVGVE 65
Query: 64 NKLYPREISKEHFV-RGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQA 122
NKLYPRE +K+ + RGR RVQLKNDD +P NP +PTR A+M H+ +IP+LK+R +Q
Sbjct: 66 NKLYPREQNKDSLLYRGRIRVQLKNDDDTPCNPQYPTRNALMHHVCEMIPRLKTRTQRQG 125
Query: 123 NSEQNQQ 129
+EQ Q
Sbjct: 126 GAEQPAQ 132
>gi|332375192|gb|AEE62737.1| unknown [Dendroctonus ponderosae]
Length = 152
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/123 (64%), Positives = 95/123 (77%), Gaps = 1/123 (0%)
Query: 7 KKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKL 66
KKH++ ERW+CIYPAYIN KKTLAEGRRIPK K V+NP +++I DVL GL +ENKL
Sbjct: 17 KKHSERERWICIYPAYINSKKTLAEGRRIPKGKCVENPNFQEIRDVLDAAGLNVLVENKL 76
Query: 67 YPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQ 126
Y RE SKE RGR RVQLKNDDG+ FPTR++++LHLG +IPKLKSRQ K ++SEQ
Sbjct: 77 YSRERSKELLYRGRIRVQLKNDDGTLCKSSFPTRDSLLLHLGDMIPKLKSRQHK-SSSEQ 135
Query: 127 NQQ 129
Q
Sbjct: 136 PAQ 138
>gi|328778273|ref|XP_001123181.2| PREDICTED: signal recognition particle 19 kDa protein [Apis
mellifera]
Length = 163
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 73/124 (58%), Positives = 96/124 (77%)
Query: 6 TKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENK 65
+KKH+D ERW+CIYP Y+N K+TLAEGR++ K K V+NPT+++I DVL G +ENK
Sbjct: 25 SKKHSDRERWICIYPVYLNSKRTLAEGRKLAKDKCVENPTHQEIRDVLVAAGFNVGVENK 84
Query: 66 LYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSE 125
L+PRE SKE RGR RVQLKNDDG+PV +FPTR++V+ ++G IPKLK+RQGK ++ E
Sbjct: 85 LHPRERSKELLYRGRIRVQLKNDDGTPVKSEFPTRDSVLAYVGTTIPKLKTRQGKHSSGE 144
Query: 126 QNQQ 129
Q Q
Sbjct: 145 QFSQ 148
>gi|24659997|ref|NP_477135.2| signal recognition particle protein 19 [Drosophila melanogaster]
gi|85700155|sp|P49963.2|SRP19_DROME RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|7295253|gb|AAF50575.1| signal recognition particle protein 19 [Drosophila melanogaster]
gi|19528625|gb|AAL90427.1| RH65975p [Drosophila melanogaster]
gi|220949426|gb|ACL87256.1| Srp19-PA [synthetic construct]
gi|220958640|gb|ACL91863.1| Srp19-PA [synthetic construct]
Length = 160
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/128 (57%), Positives = 92/128 (71%)
Query: 8 KHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLY 67
KH D+ERW+CIYPAYINRKKT EGRR+PK VDNP+Y +I DVLS + L++ +ENK Y
Sbjct: 16 KHNDMERWICIYPAYINRKKTRQEGRRLPKENCVDNPSYIEIRDVLSVSNLQFLMENKKY 75
Query: 68 PREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQN 127
RE S E RGR RVQL+N DG+ N DFPTRE++MLH+ + IP+LK+RQ K +S
Sbjct: 76 CRENSSEMEFRGRVRVQLRNVDGTLYNNDFPTRESIMLHIASKIPQLKTRQNKSGDSYHQ 135
Query: 128 QQRDLSGG 135
Q + S
Sbjct: 136 QSQPQSNA 143
>gi|345487020|ref|XP_003425608.1| PREDICTED: signal recognition particle 19 kDa protein-like isoform
2 [Nasonia vitripennis]
Length = 139
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/112 (64%), Positives = 90/112 (80%)
Query: 14 RWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREISK 73
RW+CIYPAYIN KK+LAEGR++ K K V+NPT+++I DVL + GL +ENKL+PRE SK
Sbjct: 8 RWICIYPAYINSKKSLAEGRKLTKEKCVENPTHQEIRDVLLSVGLNVGVENKLHPRERSK 67
Query: 74 EHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSE 125
E RGR RVQLKN+DG+P NPDFP+R++++ LG IPKLKSRQGKQA E
Sbjct: 68 ELLYRGRIRVQLKNNDGTPFNPDFPSRDSLLSFLGTNIPKLKSRQGKQAAGE 119
>gi|350405168|ref|XP_003487347.1| PREDICTED: signal recognition particle 19 kDa protein-like [Bombus
impatiens]
Length = 169
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 89/113 (78%)
Query: 7 KKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKL 66
KKH+D ERW+CIYP Y+N K+TLA GR++PK K V+NPTY++I DVL G +ENK
Sbjct: 32 KKHSDRERWICIYPVYLNSKRTLAGGRKLPKDKCVENPTYQEIRDVLVAAGFNVGVENKR 91
Query: 67 YPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+PRE SKE RGR RVQLKNDDG+PV P+FPTR++V+ ++G IPKLK+RQG
Sbjct: 92 HPRERSKELLFRGRIRVQLKNDDGTPVKPEFPTRDSVLAYVGTTIPKLKTRQG 144
>gi|195588442|ref|XP_002083967.1| GD13067 [Drosophila simulans]
gi|194195976|gb|EDX09552.1| GD13067 [Drosophila simulans]
Length = 160
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 93/130 (71%)
Query: 6 TKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENK 65
+ KH D+ERW+C+YPAYINRKKT EGRR+PK VDNP+Y +I DVLS + L++ +ENK
Sbjct: 14 SMKHNDMERWICVYPAYINRKKTRQEGRRLPKENCVDNPSYIEIRDVLSVSNLQFLMENK 73
Query: 66 LYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSE 125
Y RE S E RGR RVQL+N DG+ N DFPTRE++MLH+ + IP+LK+RQ K +S
Sbjct: 74 KYCRENSSEMEFRGRVRVQLRNVDGTLYNNDFPTRESIMLHIASKIPQLKTRQNKPGDSY 133
Query: 126 QNQQRDLSGG 135
Q + S
Sbjct: 134 HQQSQPQSNA 143
>gi|322795981|gb|EFZ18605.1| hypothetical protein SINV_01964 [Solenopsis invicta]
Length = 146
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 71/125 (56%), Positives = 96/125 (76%)
Query: 5 DTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN 64
+KKH++ ERWVCIYP YIN K++LA GR++ K K V+NPT+++I DVL GL +EN
Sbjct: 7 SSKKHSERERWVCIYPIYINSKRSLAGGRKLAKDKCVENPTHQEIRDVLLQAGLNVGVEN 66
Query: 65 KLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANS 124
KL+P+E SKE RGR RVQLKNDDG+P +FPTR++++ ++G I KLK+RQGKQ++S
Sbjct: 67 KLHPKERSKEPLFRGRIRVQLKNDDGTPYRSEFPTRDSLLEYVGTSISKLKTRQGKQSSS 126
Query: 125 EQNQQ 129
EQ Q
Sbjct: 127 EQASQ 131
>gi|195338145|ref|XP_002035686.1| GM13769 [Drosophila sechellia]
gi|194128779|gb|EDW50822.1| GM13769 [Drosophila sechellia]
Length = 160
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 92/130 (70%)
Query: 6 TKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENK 65
+ KH D+ERW+CIYPAYIN KKT EGRR+PK VDNP+Y +I DVLS + L++ +ENK
Sbjct: 14 SMKHNDMERWICIYPAYINSKKTRQEGRRLPKENCVDNPSYIEIRDVLSVSNLQFLMENK 73
Query: 66 LYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSE 125
Y RE S E RGR RVQL+N DG+ N DFPTRE++MLH+ + IP+LK+RQ K +S
Sbjct: 74 KYCRENSSEMEFRGRVRVQLRNVDGTLYNNDFPTRESIMLHIASKIPQLKTRQNKPGDSY 133
Query: 126 QNQQRDLSGG 135
Q + S
Sbjct: 134 HQQSQPQSNA 143
>gi|239790370|dbj|BAH71750.1| ACYPI002245 [Acyrthosiphon pisum]
Length = 143
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/132 (56%), Positives = 93/132 (70%), Gaps = 1/132 (0%)
Query: 1 MATI-DTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLK 59
M++I KK +D RW+CIYPAY+N KKTLAEGR +PK AV+NPTY++I +V+ +G
Sbjct: 1 MSSIYAEKKPSDRSRWICIYPAYLNNKKTLAEGRIVPKKFAVENPTYQEILEVVKASGFN 60
Query: 60 YHIENKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+ENK YPRE SKE RGR RVQLKNDDG+P N FP+RE++M H G IPKLKSR
Sbjct: 61 AEVENKQYPRECSKEWHFRGRIRVQLKNDDGTPFNQTFPSRESLMKHCGVQIPKLKSRAM 120
Query: 120 KQANSEQNQQRD 131
K EQ + +
Sbjct: 121 KVPGPEQQNKNE 132
>gi|307191264|gb|EFN74911.1| Signal recognition particle 19 kDa protein [Camponotus floridanus]
Length = 134
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 94/130 (72%)
Query: 9 HTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYP 68
H RWVCIYP Y+N K++L EGR++ K K V+NPT+++I DVL G +ENKL+P
Sbjct: 1 HDAFYRWVCIYPIYLNNKRSLKEGRKLAKDKCVENPTHQEIRDVLVAGGFNVGVENKLHP 60
Query: 69 REISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQ 128
+E SKE RGR R+QLKNDDG+P+ PDFPTR++++ ++G IPKLK+RQGKQ++SEQ
Sbjct: 61 KERSKEPLYRGRIRIQLKNDDGTPLRPDFPTRDSLLAYIGITIPKLKTRQGKQSSSEQAS 120
Query: 129 QRDLSGGGGG 138
Q S G
Sbjct: 121 QPSASTSKKG 130
>gi|197260662|gb|ACH56831.1| signal recognition particle [Simulium vittatum]
Length = 150
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/113 (62%), Positives = 86/113 (76%)
Query: 8 KHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLY 67
KH+D ERWVCIYPAYIN KK+ EGR + K V+NPTY++I DVL T L+ IENKLY
Sbjct: 10 KHSDRERWVCIYPAYINSKKSRQEGRILRKDICVENPTYQEIKDVLGVTNLRLIIENKLY 69
Query: 68 PREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK 120
PRE +KE RGR RVQLKNDDGSP + DFPTR+ +++H+ IP+LKSRQ K
Sbjct: 70 PRERNKEQLFRGRIRVQLKNDDGSPFSKDFPTRDNLLVHIATTIPQLKSRQNK 122
>gi|332019828|gb|EGI60289.1| Signal recognition particle 19 kDa protein [Acromyrmex echinatior]
Length = 196
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 101/139 (72%), Gaps = 3/139 (2%)
Query: 6 TKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENK 65
T ++T +RW+CIYP Y+N K++LA GR++ K K V+NPT+++I DVL GL +ENK
Sbjct: 58 TSEYTVFDRWICIYPIYLNNKRSLANGRKLAKDKCVENPTHQEIRDVLLAAGLNVGVENK 117
Query: 66 LYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSE 125
L+P+E SKE RGR RVQLKNDDG+PV +FPTR++++ ++G I KLK+RQGKQ++SE
Sbjct: 118 LHPKERSKEPLFRGRIRVQLKNDDGTPVKSEFPTRDSLLEYVGTSISKLKTRQGKQSSSE 177
Query: 126 QNQQRDLSG---GGGGGKK 141
Q Q S G G G++
Sbjct: 178 QASQPSTSTSKKGKGKGRR 196
>gi|307214691|gb|EFN89620.1| Signal recognition particle 19 kDa protein [Harpegnathos saltator]
Length = 146
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 98/125 (78%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
+A +K+H++ ERW+CIYP Y+N K++LA+GR++ K K V+NPT+++I DVL G
Sbjct: 3 LAWNPSKRHSERERWICIYPIYLNSKRSLADGRKLTKNKCVENPTHQEIRDVLVAVGFNV 62
Query: 61 HIENKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK 120
+ENK +P+E SKE RGR RVQLKNDDG+P+ P++PTR++++ ++G IPKLK+RQGK
Sbjct: 63 GVENKQHPKERSKEPIYRGRIRVQLKNDDGTPIRPEYPTRDSLLEYVGTTIPKLKTRQGK 122
Query: 121 QANSE 125
Q+++E
Sbjct: 123 QSSNE 127
>gi|194747645|ref|XP_001956262.1| GF25121 [Drosophila ananassae]
gi|190623544|gb|EDV39068.1| GF25121 [Drosophila ananassae]
Length = 162
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/117 (58%), Positives = 88/117 (75%)
Query: 8 KHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLY 67
KH+D+ERW+CIYPAYIN KKT EGRR+PK V+NPTY +I DVLS T L++ +EN Y
Sbjct: 16 KHSDMERWICIYPAYINSKKTRQEGRRLPKENCVENPTYIEIRDVLSVTNLQFLVENMKY 75
Query: 68 PREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANS 124
RE S E RGR RVQL+N DG+ N DFP+RE++M+H+ + IP+LK+RQ K +S
Sbjct: 76 CREKSSELQYRGRVRVQLRNADGTLFNNDFPSRESIMIHIASKIPQLKTRQNKSGDS 132
>gi|340726182|ref|XP_003401440.1| PREDICTED: signal recognition particle 19 kDa protein-like [Bombus
terrestris]
Length = 153
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/117 (58%), Positives = 89/117 (76%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
+A +KKH+D ERW+CIYP Y+N K+TLA GR++PK K V+NPTY++I DVL G
Sbjct: 11 LAWNPSKKHSDRERWICIYPVYLNSKRTLAGGRKLPKDKCVENPTYQEIRDVLVAAGFNV 70
Query: 61 HIENKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSR 117
+ENK +PRE SKE RGR RVQLKNDDG+PV +FPTR++V+ ++G IPKLK+R
Sbjct: 71 GVENKQHPRERSKELLFRGRIRVQLKNDDGTPVKSEFPTRDSVLAYVGTTIPKLKTR 127
>gi|157107957|ref|XP_001650015.1| hypothetical protein AaeL_AAEL004914 [Aedes aegypti]
gi|108879454|gb|EAT43679.1| AAEL004914-PA [Aedes aegypti]
Length = 159
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 66/118 (55%), Positives = 92/118 (77%)
Query: 8 KHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLY 67
+H+D ERWVCIYPAYIN+KKT EGRRIPK + VDNP++++I D++ + L +ENK Y
Sbjct: 16 QHSDRERWVCIYPAYINKKKTRQEGRRIPKEQCVDNPSFQEIRDIMHSLNLNVIVENKQY 75
Query: 68 PREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSE 125
RE SKE RGR RVQL+N+DGSP+ ++P R+++++HLG +IP+LK+RQGK A +
Sbjct: 76 SREKSKELAFRGRIRVQLRNNDGSPILKEYPDRDSLLVHLGKMIPQLKTRQGKPAEPQ 133
>gi|195492527|ref|XP_002094030.1| GE20421 [Drosophila yakuba]
gi|194180131|gb|EDW93742.1| GE20421 [Drosophila yakuba]
Length = 161
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 86/115 (74%)
Query: 6 TKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENK 65
+ KH+D+ERW+CIYPAYIN K+T EGRR+PK VDNPTY +I DVLS + L + +ENK
Sbjct: 14 SMKHSDMERWICIYPAYINSKRTRQEGRRLPKENCVDNPTYTEIRDVLSVSNLPFLVENK 73
Query: 66 LYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK 120
Y RE S E RGR RVQL+N DG+ N DFPTRE++M H+ + IP+LK+RQ K
Sbjct: 74 KYSRENSSELEFRGRVRVQLRNVDGTLYNGDFPTRESIMQHIASKIPQLKTRQNK 128
>gi|194865510|ref|XP_001971465.1| GG14974 [Drosophila erecta]
gi|190653248|gb|EDV50491.1| GG14974 [Drosophila erecta]
Length = 161
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 69/128 (53%), Positives = 89/128 (69%)
Query: 8 KHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLY 67
KH+D+ERW+CIYPAYIN K+T EGRR+PK VDNPTY +I DVLS + L + +ENK Y
Sbjct: 16 KHSDMERWICIYPAYINSKRTRQEGRRLPKENCVDNPTYIEIRDVLSVSNLPFLVENKKY 75
Query: 68 PREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQN 127
RE S E RGR RVQL+ DG+ N DF TRE++M+H+ + IP+LK+RQ K +S
Sbjct: 76 CRENSNELEFRGRVRVQLRVADGTLYNSDFATRESIMMHIASKIPQLKTRQNKTGDSYHQ 135
Query: 128 QQRDLSGG 135
Q + S
Sbjct: 136 QSQPQSNA 143
>gi|274324135|ref|NP_001162109.1| signal recognition particle 19 kDa protein-like [Acyrthosiphon
pisum]
gi|239791568|dbj|BAH72232.1| ACYPI002560 [Acyrthosiphon pisum]
Length = 125
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/109 (61%), Positives = 82/109 (75%)
Query: 7 KKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKL 66
KK +D RW+CIYPAY+N KKTLAEGR +PK AV+NPTY++I +V+ +G +ENK
Sbjct: 8 KKPSDRSRWICIYPAYLNNKKTLAEGRIVPKKFAVENPTYQEILEVVKASGFNAEVENKQ 67
Query: 67 YPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLK 115
YPRE SKE RGR RVQLKNDDG+P N FP+RE++M H G IPKLK
Sbjct: 68 YPRECSKEWHFRGRIRVQLKNDDGTPFNQTFPSRESLMKHCGVQIPKLK 116
>gi|195428725|ref|XP_002062416.1| GK16666 [Drosophila willistoni]
gi|194158501|gb|EDW73402.1| GK16666 [Drosophila willistoni]
Length = 166
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 85/114 (74%)
Query: 7 KKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKL 66
K H +VERW+C+YPAYIN KKT EGRR+PK V+NPTY ++ DVLS + + +ENK
Sbjct: 15 KTHNEVERWICLYPAYINSKKTRQEGRRLPKENCVENPTYMEMRDVLSVANMHFVVENKQ 74
Query: 67 YPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK 120
Y RE S+E RGR RVQL+N DG+ N +FPTREA+MLH+ + IP+LK+RQ K
Sbjct: 75 YCREKSRELQFRGRVRVQLRNADGTLYNNEFPTREAIMLHVASKIPQLKTRQNK 128
>gi|443724435|gb|ELU12447.1| hypothetical protein CAPTEDRAFT_172694 [Capitella teleta]
Length = 162
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/110 (62%), Positives = 84/110 (76%), Gaps = 1/110 (0%)
Query: 9 HTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYP 68
H D ERWVCIYP YIN KKTLAEGRR+P K VDNP Y +I DV + GL +ENK++P
Sbjct: 20 HADRERWVCIYPLYINSKKTLAEGRRVPLTKGVDNPLYSEIRDVCAAAGLTLGVENKVHP 79
Query: 69 REI-SKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSR 117
RE+ S++ RGR RVQLKN+DGSPVN FPTR++++L+LG IPKLK R
Sbjct: 80 REMDSRDTKSRGRIRVQLKNEDGSPVNDKFPTRQSILLYLGETIPKLKGR 129
>gi|195013017|ref|XP_001983790.1| GH16090 [Drosophila grimshawi]
gi|193897272|gb|EDV96138.1| GH16090 [Drosophila grimshawi]
Length = 161
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 85/113 (75%)
Query: 8 KHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLY 67
KH +VERW+CIYPAYIN KKT EGRR+P+ VDNPTY +I DVLS + + + +ENK Y
Sbjct: 16 KHNEVERWICIYPAYINSKKTRQEGRRLPQENCVDNPTYVEIRDVLSVSNMHFVVENKQY 75
Query: 68 PREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK 120
RE S+E RGR RVQL+N DG+ + +FPTRE++M H+ + IP+LK+RQ K
Sbjct: 76 CREKSRELQFRGRVRVQLRNADGTLCSSEFPTRESIMQHVASKIPQLKTRQNK 128
>gi|195376187|ref|XP_002046878.1| GJ12246 [Drosophila virilis]
gi|194154036|gb|EDW69220.1| GJ12246 [Drosophila virilis]
Length = 158
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 85/113 (75%)
Query: 8 KHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLY 67
KHT+VERW+CIYPAYIN KKT EGRR+PK V+NPTY +I DVLS + +++ +ENK Y
Sbjct: 16 KHTEVERWICIYPAYINSKKTRQEGRRLPKENCVENPTYVEIRDVLSVSNVQFVVENKQY 75
Query: 68 PREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK 120
RE S+E RGR RVQL+N DG+ N +F TRE++M H+ IP+LK+RQ K
Sbjct: 76 CREKSRELQFRGRVRVQLRNADGTLCNSEFSTRESIMRHVAGKIPQLKTRQNK 128
>gi|58392070|ref|XP_319081.2| AGAP009948-PA [Anopheles gambiae str. PEST]
gi|55236165|gb|EAA14124.2| AGAP009948-PA [Anopheles gambiae str. PEST]
Length = 150
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/114 (60%), Positives = 86/114 (75%)
Query: 7 KKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKL 66
KKH+D ERWVCIYPAYINRKK+ EGRRIPK VD+P+ ++I DVL + +E K
Sbjct: 14 KKHSDRERWVCIYPAYINRKKSRQEGRRIPKQYCVDDPSPQEIRDVLQALNMNVLVELKQ 73
Query: 67 YPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK 120
YPRE S+E RGR RVQL+NDDG+P+N ++ TR++V+LHLG IP LKSRQ K
Sbjct: 74 YPRERSRELQCRGRIRVQLRNDDGAPLNSEYATRDSVLLHLGKTIPLLKSRQAK 127
>gi|321456181|gb|EFX67295.1| hypothetical protein DAPPUDRAFT_302042 [Daphnia pulex]
Length = 149
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 88/121 (72%)
Query: 7 KKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKL 66
KK +D ERW+C+YPAYI+ KT +GRR+PK++AVD PT +I DVL+ K +E K
Sbjct: 13 KKPSDPERWICVYPAYIDSNKTRVDGRRVPKSRAVDKPTCSEICDVLTAANFKVGVEPKF 72
Query: 67 YPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQ 126
YPRE SKE +RGR RVQLKN+DG+PVNP FP+R++V+L++G IP LKSR K Q
Sbjct: 73 YPREPSKEDEMRGRVRVQLKNEDGTPVNPAFPSRDSVLLYIGEKIPHLKSRVFKSGGDGQ 132
Query: 127 N 127
+
Sbjct: 133 S 133
>gi|170054138|ref|XP_001862990.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874510|gb|EDS37893.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 173
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 68/116 (58%), Positives = 86/116 (74%)
Query: 9 HTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYP 68
H+D ERWVCIYPAY+NRKKT EGRR+P A VDNPT+++I DVL L +ENKLY
Sbjct: 18 HSDRERWVCIYPAYLNRKKTRQEGRRLPLAHCVDNPTFQEIRDVLQVLKLNVIVENKLYT 77
Query: 69 REISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANS 124
RE SKE RGR RVQL+ DDG PV ++ TR++V+L+LG IP+LK+R G+ N+
Sbjct: 78 REKSKELAYRGRIRVQLRQDDGEPVLEEYSTRDSVLLYLGDTIPQLKTRMGRAENA 133
>gi|1016766|gb|AAA79181.1| signal recognition particle 19 kDa protein [Drosophila
melanogaster]
Length = 163
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 86/122 (70%)
Query: 14 RWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREISK 73
RW+CIYPAYINRKKT EGRR+PK VDNP+Y +I D +S + L++ +ENK Y RE S
Sbjct: 25 RWICIYPAYINRKKTRQEGRRLPKENCVDNPSYIEIRDAVSVSNLQFLMENKKYCRENSS 84
Query: 74 EHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQRDLS 133
E RGR RVQL+N DG+ N DFPTRE++MLH+ + IP+LK+RQ K +S Q + S
Sbjct: 85 EMEFRGRVRVQLRNVDGTLYNIDFPTRESIMLHIASKIPQLKTRQNKSGDSYHQQSQPQS 144
Query: 134 GG 135
Sbjct: 145 NA 146
>gi|158286673|ref|XP_308859.3| AGAP006895-PA [Anopheles gambiae str. PEST]
gi|157020581|gb|EAA03966.3| AGAP006895-PA [Anopheles gambiae str. PEST]
Length = 165
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 86/114 (75%)
Query: 7 KKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKL 66
KKH+D ERWVCIYPAYINRKK+ EGRRIPK VD+P+ ++I DVL + +E K
Sbjct: 29 KKHSDRERWVCIYPAYINRKKSRQEGRRIPKQCCVDDPSPQEIRDVLQALNMNVLVELKQ 88
Query: 67 YPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK 120
YPRE S+E RGR RVQL+NDDG+P+N ++ TR++++LHLG IP LKSRQ K
Sbjct: 89 YPRERSRELQCRGRIRVQLRNDDGAPLNSEYATRDSILLHLGKTIPLLKSRQAK 142
>gi|195126084|ref|XP_002007504.1| GI12354 [Drosophila mojavensis]
gi|193919113|gb|EDW17980.1| GI12354 [Drosophila mojavensis]
Length = 156
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 83/113 (73%)
Query: 8 KHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLY 67
KH +VERW+CIYPAYIN KKT EGRR+PK V+NPTY +I DVLS L++ +ENK Y
Sbjct: 16 KHNEVERWICIYPAYINSKKTRQEGRRLPKENCVENPTYVEIRDVLSVCNLQFVVENKQY 75
Query: 68 PREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK 120
RE S+E RGR RVQL+N DG+ N DF TRE+VM ++ IP+LK+RQ K
Sbjct: 76 CREKSRELQFRGRVRVQLRNADGTLCNKDFSTRESVMKYVAGKIPQLKTRQNK 128
>gi|198463113|ref|XP_001352691.2| GA18198 [Drosophila pseudoobscura pseudoobscura]
gi|198151118|gb|EAL30190.2| GA18198 [Drosophila pseudoobscura pseudoobscura]
Length = 169
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 85/117 (72%)
Query: 8 KHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLY 67
KH +ERW+CIYPAYIN KKT EGRR+PK V+NP Y ++ DVLS T + + +E Y
Sbjct: 16 KHNQMERWICIYPAYINSKKTRQEGRRLPKENCVENPHYHEMRDVLSVTNMHFLVETLKY 75
Query: 68 PREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANS 124
PREISKE RGR RVQL+N DG+ + DFP+RE++M ++ IP+LK+RQ K A+S
Sbjct: 76 PREISKEAQFRGRIRVQLRNADGTLCSKDFPSRESIMQYIAGKIPQLKTRQNKSADS 132
>gi|195174422|ref|XP_002027973.1| GL21099 [Drosophila persimilis]
gi|194115683|gb|EDW37726.1| GL21099 [Drosophila persimilis]
Length = 165
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 85/117 (72%)
Query: 8 KHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLY 67
KH +ERW+CIYPAYIN KKT EGRR+PK V+NP Y ++ DVLS T + + +E Y
Sbjct: 16 KHNQMERWICIYPAYINSKKTRQEGRRLPKENCVENPHYHEMRDVLSVTNMHFLVETLKY 75
Query: 68 PREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANS 124
PREISKE RGR RVQL+N DG+ + DFP+RE++M ++ IP+LK+RQ K A+S
Sbjct: 76 PREISKEPQFRGRIRVQLRNADGTLCSKDFPSRESIMQYIAGKIPQLKTRQNKSADS 132
>gi|198425576|ref|XP_002131265.1| PREDICTED: similar to signal recognition particle 19 [Ciona
intestinalis]
Length = 142
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 89/126 (70%), Gaps = 1/126 (0%)
Query: 10 TDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPR 69
+ ER++CIYPAY+N KKTLAEGRRIPK A +NPT+ +I DV GLK +ENK YPR
Sbjct: 7 SSSERFLCIYPAYLNSKKTLAEGRRIPKKSACENPTFGEIKDVCIAAGLKPLVENKFYPR 66
Query: 70 EISKEHFV-RGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQ 128
E+ K RGR RVQLKN+DGS V+P FP ++ ++LH+G +IPKLK+R K + + +Q
Sbjct: 67 ELYKSDAASRGRVRVQLKNEDGSLVDPRFPNKKTLLLHVGEMIPKLKARTSKGGSGDGSQ 126
Query: 129 QRDLSG 134
+G
Sbjct: 127 TSSQAG 132
>gi|327276631|ref|XP_003223071.1| PREDICTED: signal recognition particle 19 kDa protein-like [Anolis
carolinensis]
Length = 144
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 90/131 (68%), Gaps = 1/131 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + TD R++CIYPAYIN KKT+AEGRRIP KA++NPT +I DV GL
Sbjct: 1 MAWAASSLPTDKSRFICIYPAYINNKKTIAEGRRIPLDKAIENPTSTEIQDVCVAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+YPRE +++ RGR R+QLK +DG+P P FPTR+AVML+ IPKLK+R
Sbjct: 61 LLEKNKMYPREWNRDAQYRGRVRIQLKQEDGNPCQPQFPTRKAVMLYAAETIPKLKTRTQ 120
Query: 120 KQANSEQNQQR 130
K S+Q+ Q+
Sbjct: 121 KMGGSDQSLQQ 131
>gi|225716802|gb|ACO14247.1| Signal recognition particle 19 kDa protein [Esox lucius]
Length = 141
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/138 (50%), Positives = 90/138 (65%), Gaps = 12/138 (8%)
Query: 6 TKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENK 65
+K D ER++CIYPA+IN KKTLAEGRRIP KAV+NPT +I DVL+ G+ ++ENK
Sbjct: 5 SKNPADKERFICIYPAFINSKKTLAEGRRIPTEKAVENPTCAEIRDVLTAAGMNVYVENK 64
Query: 66 LYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSE 125
+YPRE +++ RGR RVQLK DDG+ N FP+R+ VM ++ IPKLKSR K
Sbjct: 65 MYPREWNRDVQFRGRVRVQLKQDDGTLYNDKFPSRKDVMFYVAETIPKLKSRTQK----- 119
Query: 126 QNQQRDLSGGGGGGKKQG 143
GGG +QG
Sbjct: 120 -------GGGGDTSSQQG 130
>gi|225716720|gb|ACO14206.1| Signal recognition particle 19 kDa protein [Esox lucius]
Length = 140
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/138 (50%), Positives = 90/138 (65%), Gaps = 12/138 (8%)
Query: 6 TKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENK 65
+K D ER++CIYPA+IN KKTLAEGRRIP KAV+NPT +I DVL+ G+ ++ENK
Sbjct: 5 SKNPADKERFICIYPAFINSKKTLAEGRRIPTEKAVENPTCAEIRDVLTAAGMNVYVENK 64
Query: 66 LYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSE 125
+YPRE +++ RGR RVQLK DDG+ N FP+R+ VM ++ IPKLKSR K
Sbjct: 65 MYPREWNRDVQFRGRVRVQLKQDDGTLYNDKFPSRKDVMFYVAETIPKLKSRTQK----- 119
Query: 126 QNQQRDLSGGGGGGKKQG 143
GGG +QG
Sbjct: 120 -------GGGGDTSSQQG 130
>gi|312376380|gb|EFR23483.1| hypothetical protein AND_12793 [Anopheles darlingi]
Length = 165
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 94/137 (68%), Gaps = 5/137 (3%)
Query: 7 KKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKL 66
KKH+D ERW+CIYP YINRKKT EGRR+PK VD+P+ ++I DVL + + +E K
Sbjct: 29 KKHSDRERWICIYPTYINRKKTRQEGRRLPKENCVDDPSIQEIRDVLQSINMNLLLELKQ 88
Query: 67 YPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQ 126
YPRE S+E RGR RVQL++D G+P+N ++PTR+++++H+G IP LKSRQ K
Sbjct: 89 YPRERSRELQHRGRVRVQLRDDGGNPLNHEYPTRDSLLVHVGKTIPMLKSRQTKTP---- 144
Query: 127 NQQRDLSGGGGGGKKQG 143
+Q ++ G K+G
Sbjct: 145 -EQAPVAATTSAGPKKG 160
>gi|47086995|ref|NP_998508.1| signal recognition particle 19 kDa protein [Danio rerio]
gi|31419453|gb|AAH53168.1| Signal recognition particle 19 [Danio rerio]
Length = 141
Score = 138 bits (347), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 71/138 (51%), Positives = 87/138 (63%), Gaps = 12/138 (8%)
Query: 6 TKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENK 65
T D ER++CIYPAYIN KKTLAEGRRIP KAV+NPT +I VLS GL H+EN
Sbjct: 5 TTNPADKERFLCIYPAYINSKKTLAEGRRIPTDKAVENPTCAEIQGVLSAAGLNVHVENS 64
Query: 66 LYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSE 125
+YPRE +++ RGR RVQLK +DGS F +R+ VM ++ +IPKLKSR K
Sbjct: 65 MYPREWNRDVQFRGRVRVQLKMEDGSFCQDKFTSRKDVMFYVAEMIPKLKSRTQK----- 119
Query: 126 QNQQRDLSGGGGGGKKQG 143
SGG G +QG
Sbjct: 120 -------SGGAEAGAQQG 130
>gi|350537979|ref|NP_001232313.1| putative signal recognition particle 19 kDa [Taeniopygia guttata]
gi|197127441|gb|ACH43939.1| putative signal recognition particle 19 kDa [Taeniopygia guttata]
gi|197127442|gb|ACH43940.1| putative signal recognition particle 19 kDa [Taeniopygia guttata]
gi|197127443|gb|ACH43941.1| putative signal recognition particle 19 kDa [Taeniopygia guttata]
gi|197129835|gb|ACH46333.1| putative signal recognition particle 19 kDa [Taeniopygia guttata]
Length = 146
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 87/121 (71%), Gaps = 1/121 (0%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
D ER++CIYPAY+N KKT+AEGRRIP KAV+NPT +I DV + G +E NK+YPR
Sbjct: 13 DKERFICIYPAYLNNKKTIAEGRRIPIDKAVENPTSTEIQDVCAAVGFNVLLEKNKMYPR 72
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQ 129
E +++ RGR R+QLK DDG+P P FPTR++VML+ IPKLK+R K S+Q+ Q
Sbjct: 73 EWNRDVQYRGRVRIQLKQDDGNPCLPQFPTRKSVMLYAAETIPKLKTRTQKMGGSDQSLQ 132
Query: 130 R 130
+
Sbjct: 133 Q 133
>gi|363744626|ref|XP_001233375.2| PREDICTED: signal recognition particle 19 kDa protein [Gallus
gallus]
Length = 144
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 87/121 (71%), Gaps = 1/121 (0%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
D ER++CIYPAY+N KKT+AEGRRIP KAV+NPT +I DV + G +E NK+YPR
Sbjct: 11 DKERFICIYPAYLNNKKTIAEGRRIPIDKAVENPTSTEIQDVCAAVGFNVLLEKNKMYPR 70
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQ 129
E +++ RGR R+QLK DDG+P P FPTR++VML+ IPKLK+R K S+Q+ Q
Sbjct: 71 EWNRDVQYRGRVRIQLKQDDGNPCLPQFPTRKSVMLYAAETIPKLKTRTQKMGGSDQSLQ 130
Query: 130 R 130
+
Sbjct: 131 Q 131
>gi|156403855|ref|XP_001640123.1| predicted protein [Nematostella vectensis]
gi|156227256|gb|EDO48060.1| predicted protein [Nematostella vectensis]
Length = 148
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 84/116 (72%), Gaps = 1/116 (0%)
Query: 13 ERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN-KLYPREI 71
+RWV +YPAY+N ++T+ +GRR+PKAKAVDNPT +I D+ ++ L +EN K YP+E
Sbjct: 13 DRWVTVYPAYLNSRRTVCQGRRVPKAKAVDNPTVSEIRDICTSQNLSCELENNKFYPKES 72
Query: 72 SKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQN 127
+K+ +GR R+QLKN DG+PVN D P R+A+ LG +IPKLK+RQ K S+ N
Sbjct: 73 AKDVVCKGRVRIQLKNSDGTPVNADIPNRKALFCFLGEMIPKLKTRQTKTGQSDGN 128
>gi|197127440|gb|ACH43938.1| putative signal recognition particle 19 kDa [Taeniopygia guttata]
Length = 146
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 86/121 (71%), Gaps = 1/121 (0%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
D ER++CIYPAY+N KKT+AEGRRIP KAV+NPT +I DV + G +E NK+YPR
Sbjct: 13 DKERFICIYPAYLNNKKTIAEGRRIPIDKAVENPTSTEIQDVCAAVGFNVLLEKNKMYPR 72
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQ 129
E +++ RGR R+QLK DDG+P P FPTR++VML IPKLK+R K S+Q+ Q
Sbjct: 73 EWNRDVQYRGRVRIQLKQDDGNPCLPQFPTRKSVMLDAAETIPKLKTRTQKMGGSDQSLQ 132
Query: 130 R 130
+
Sbjct: 133 Q 133
>gi|449280186|gb|EMC87536.1| Signal recognition particle 19 kDa protein, partial [Columba livia]
Length = 131
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/118 (55%), Positives = 85/118 (72%), Gaps = 1/118 (0%)
Query: 14 RWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREIS 72
R++CIYPAY+N KKT+AEGRRIP KAV+NPT +I DV + G +E NK+YPRE +
Sbjct: 1 RFICIYPAYLNNKKTIAEGRRIPIDKAVENPTSTEIQDVCAAAGFNVLLEKNKMYPREWN 60
Query: 73 KEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQR 130
++ RGR R+QLK DDG+P P FPTR++VML+ IPKLK+R K S+QN Q+
Sbjct: 61 RDVQYRGRVRIQLKQDDGNPCLPQFPTRKSVMLYAAETIPKLKTRTQKMGGSDQNLQQ 118
>gi|301767594|ref|XP_002919215.1| PREDICTED: signal recognition particle 19 kDa protein-like
[Ailuropoda melanoleuca]
Length = 144
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 66/131 (50%), Positives = 90/131 (68%), Gaps = 1/131 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ RGR RVQLK DDGS FP+R++VML++ +IPKLK+R
Sbjct: 61 FLEKNKMYSREWNRDVQYRGRVRVQLKQDDGSLCLVQFPSRKSVMLYVAEMIPKLKTRTQ 120
Query: 120 KQANSEQNQQR 130
K +Q+ Q+
Sbjct: 121 KTGGGDQSLQQ 131
>gi|225714838|gb|ACO13265.1| Signal recognition particle 19 kDa protein [Esox lucius]
Length = 141
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 88/125 (70%), Gaps = 3/125 (2%)
Query: 13 ERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREIS 72
+R++CIYP+Y+N KKTLAEGRRIP KAV+NPT +I DVL+ G K +ENK+YPRE +
Sbjct: 12 DRFICIYPSYVNSKKTLAEGRRIPAEKAVENPTCAEISDVLTAAGAKVLVENKMYPREWN 71
Query: 73 KEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQRDL 132
++ RGR RVQLK +DG+ + F TR+ VM++ +IPKLK+R K A ++ Q+
Sbjct: 72 RDVTFRGRVRVQLKEEDGTLCSEKFATRKDVMIYCAEMIPKLKTRTQKGAGADSGSQQ-- 129
Query: 133 SGGGG 137
G GG
Sbjct: 130 -GDGG 133
>gi|432114680|gb|ELK36519.1| Signal recognition particle 19 kDa protein [Myotis davidii]
Length = 144
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 66/131 (50%), Positives = 89/131 (67%), Gaps = 1/131 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNA 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R
Sbjct: 61 FLEKNKMYSREWNRDAQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQ 120
Query: 120 KQANSEQNQQR 130
K S+Q Q+
Sbjct: 121 KTGGSDQTLQQ 131
>gi|426349644|ref|XP_004042401.1| PREDICTED: signal recognition particle 19 kDa protein [Gorilla
gorilla gorilla]
Length = 144
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 90/131 (68%), Gaps = 1/131 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACATARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R
Sbjct: 61 FLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQ 120
Query: 120 KQANSEQNQQR 130
K ++Q+ Q+
Sbjct: 121 KTGGADQSLQQ 131
>gi|355691519|gb|EHH26704.1| Signal recognition particle 19 kDa protein [Macaca mulatta]
gi|355758817|gb|EHH61524.1| Signal recognition particle 19 kDa protein [Macaca fascicularis]
gi|380787755|gb|AFE65753.1| signal recognition particle 19 kDa protein isoform 1 [Macaca
mulatta]
gi|383410249|gb|AFH28338.1| signal recognition particle 19 kDa protein isoform 1 [Macaca
mulatta]
gi|384948992|gb|AFI38101.1| signal recognition particle 19 kDa protein isoform 1 [Macaca
mulatta]
Length = 144
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 90/131 (68%), Gaps = 1/131 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R
Sbjct: 61 FLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQ 120
Query: 120 KQANSEQNQQR 130
K ++Q+ Q+
Sbjct: 121 KAGGADQSLQQ 131
>gi|15012087|gb|AAH10947.1| Signal recognition particle 19kDa [Homo sapiens]
Length = 144
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 90/131 (68%), Gaps = 1/131 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACTAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R
Sbjct: 61 FLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQ 120
Query: 120 KQANSEQNQQR 130
K ++Q+ Q+
Sbjct: 121 KTGGADQSLQQ 131
>gi|4507213|ref|NP_003126.1| signal recognition particle 19 kDa protein isoform 1 [Homo sapiens]
gi|334848147|ref|NP_001229349.1| signal recognition particle 19kDa [Pan troglodytes]
gi|332221461|ref|XP_003259879.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 isoform 1 [Nomascus
leucogenys]
gi|85543356|sp|Q5RBR1.2|SRP19_PONAB RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|115502457|sp|P09132.3|SRP19_HUMAN RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|36113|emb|CAA31280.1| unnamed protein product [Homo sapiens]
gi|119569384|gb|EAW48999.1| hCG2039564, isoform CRA_c [Homo sapiens]
gi|189053124|dbj|BAG34746.1| unnamed protein product [Homo sapiens]
gi|306921413|dbj|BAJ17786.1| signal recognition particle 19kDa [synthetic construct]
gi|410224066|gb|JAA09252.1| signal recognition particle 19kDa [Pan troglodytes]
gi|410248680|gb|JAA12307.1| signal recognition particle 19kDa [Pan troglodytes]
gi|410295666|gb|JAA26433.1| signal recognition particle 19kDa [Pan troglodytes]
gi|410352151|gb|JAA42679.1| signal recognition particle 19kDa [Pan troglodytes]
Length = 144
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 90/131 (68%), Gaps = 1/131 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R
Sbjct: 61 FLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQ 120
Query: 120 KQANSEQNQQR 130
K ++Q+ Q+
Sbjct: 121 KTGGADQSLQQ 131
>gi|197100382|ref|NP_001125454.1| signal recognition particle 19 kDa protein [Pongo abelii]
gi|55728098|emb|CAH90799.1| hypothetical protein [Pongo abelii]
Length = 146
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 90/131 (68%), Gaps = 1/131 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 3 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNV 62
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R
Sbjct: 63 FLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQ 122
Query: 120 KQANSEQNQQR 130
K ++Q+ Q+
Sbjct: 123 KTGGADQSLQQ 133
>gi|225715664|gb|ACO13678.1| Signal recognition particle 19 kDa protein [Esox lucius]
Length = 141
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 87/125 (69%), Gaps = 3/125 (2%)
Query: 13 ERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREIS 72
+R++CIYP+Y+N KKTLAEGRRIP KAV+NPT +I DVL+ G K +ENK+YPRE +
Sbjct: 12 DRFICIYPSYVNSKKTLAEGRRIPAEKAVENPTCAEISDVLTAAGAKVLVENKMYPREWN 71
Query: 73 KEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQRDL 132
++ RGR RVQLK +DG+ + F TR+ VM++ +IPKLK R K A ++ Q+
Sbjct: 72 RDVTFRGRVRVQLKEEDGTLCSEKFATRKDVMIYCAEMIPKLKPRTQKGAGADSGSQQ-- 129
Query: 133 SGGGG 137
G GG
Sbjct: 130 -GDGG 133
>gi|345324663|ref|XP_001507018.2| PREDICTED: signal recognition particle 19 kDa protein-like isoform
1 [Ornithorhynchus anatinus]
Length = 174
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 86/126 (68%), Gaps = 1/126 (0%)
Query: 5 DTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE- 63
D D +R++CIYPAY+N KKT+AEGRRIP KAV+NPT +I DV + GL +E
Sbjct: 35 DEMSPADKDRFICIYPAYLNNKKTIAEGRRIPVEKAVENPTSTEIQDVCAAVGLNVLVEK 94
Query: 64 NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQAN 123
NK+Y RE +++ RGR R+QLK DDGS P FP+R++VML+ +IPKLK+R K +
Sbjct: 95 NKMYSREWNRDMQYRGRVRIQLKRDDGSLCFPQFPSRKSVMLYAAEMIPKLKTRTQKSGS 154
Query: 124 SEQNQQ 129
+ N Q
Sbjct: 155 GDHNYQ 160
>gi|350580987|ref|XP_003480936.1| PREDICTED: signal recognition particle 19 kDa protein-like [Sus
scrofa]
Length = 144
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 89/131 (67%), Gaps = 1/131 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R
Sbjct: 61 FLEKNKMYSREWNRDLQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQ 120
Query: 120 KQANSEQNQQR 130
K +Q+ Q+
Sbjct: 121 KTGGGDQSLQQ 131
>gi|225716128|gb|ACO13910.1| Signal recognition particle 19 kDa protein [Esox lucius]
Length = 141
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 87/125 (69%), Gaps = 3/125 (2%)
Query: 13 ERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREIS 72
+R +CIYP+Y+N KKTLAEGRRIP KAV+NPT +I DVL+ G + +ENK+YPRE +
Sbjct: 12 DRLICIYPSYVNSKKTLAEGRRIPAEKAVENPTCAEISDVLTAAGARVLVENKMYPREWN 71
Query: 73 KEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQRDL 132
++ RGR RVQLK +DG+ + F TR+ VM++ +IPKLK+R K A ++ Q+
Sbjct: 72 RDVTFRGRVRVQLKEEDGTLCSEKFATRKDVMIYCAEMIPKLKTRTQKGAGADSGSQQ-- 129
Query: 133 SGGGG 137
G GG
Sbjct: 130 -GDGG 133
>gi|410949070|ref|XP_003981247.1| PREDICTED: signal recognition particle 19 kDa protein isoform 1
[Felis catus]
Length = 144
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 89/131 (67%), Gaps = 1/131 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R
Sbjct: 61 FLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQ 120
Query: 120 KQANSEQNQQR 130
K +Q+ Q+
Sbjct: 121 KTGGGDQSLQQ 131
>gi|194220023|ref|XP_001503600.2| PREDICTED: signal recognition particle 19 kDa protein-like isoform
1 [Equus caballus]
Length = 146
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/133 (49%), Positives = 90/133 (67%), Gaps = 3/133 (2%)
Query: 1 MATIDTKKHTDVERWV--CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGL 58
MA + + +RWV CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPAEQDRWVSFCIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGL 60
Query: 59 KYHIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSR 117
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML++ +IPKLK+R
Sbjct: 61 NVFLERNKMYSREWNRDAQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYVAEMIPKLKTR 120
Query: 118 QGKQANSEQNQQR 130
K +Q+ Q+
Sbjct: 121 TQKTGGGDQSLQQ 133
>gi|281351901|gb|EFB27485.1| hypothetical protein PANDA_007819 [Ailuropoda melanoleuca]
Length = 142
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 89/127 (70%), Gaps = 1/127 (0%)
Query: 5 DTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE- 63
+T+ + R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL +E
Sbjct: 3 ETRCASFCGRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNVFLEK 62
Query: 64 NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQAN 123
NK+Y RE +++ RGR RVQLK DDGS FP+R++VML++ +IPKLK+R K
Sbjct: 63 NKMYSREWNRDVQYRGRVRVQLKQDDGSLCLVQFPSRKSVMLYVAEMIPKLKTRTQKTGG 122
Query: 124 SEQNQQR 130
+Q+ Q+
Sbjct: 123 GDQSLQQ 129
>gi|160333840|ref|NP_079803.2| signal recognition particle 19 kDa protein [Mus musculus]
gi|12835178|dbj|BAB23179.1| unnamed protein product [Mus musculus]
gi|30704886|gb|AAH51932.1| Srp19 protein [Mus musculus]
gi|74187565|dbj|BAE36729.1| unnamed protein product [Mus musculus]
gi|74214555|dbj|BAE31124.1| unnamed protein product [Mus musculus]
gi|148664666|gb|EDK97082.1| signal recognition particle 19, isoform CRA_a [Mus musculus]
Length = 144
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 90/131 (68%), Gaps = 1/131 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNA 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML++ +IPKLK+R
Sbjct: 61 FLEKNKMYSREWNRDVQFRGRVRVQLKQEDGSLCLVQFPSRKSVMLYVAEMIPKLKTRTQ 120
Query: 120 KQANSEQNQQR 130
K ++ + Q+
Sbjct: 121 KSGGADPSLQQ 131
>gi|12846431|dbj|BAB27165.1| unnamed protein product [Mus musculus]
Length = 135
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 90/131 (68%), Gaps = 1/131 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNA 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML++ +IPKLK+R
Sbjct: 61 FLEKNKMYSREWNRDVQFRGRVRVQLKQEDGSLCLVQFPSRKSVMLYVAEMIPKLKTRTQ 120
Query: 120 KQANSEQNQQR 130
K ++ + Q+
Sbjct: 121 KSGGADPSLQQ 131
>gi|326935164|ref|XP_003213647.1| PREDICTED: signal recognition particle 19 kDa protein-like, partial
[Meleagris gallopavo]
Length = 130
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 84/117 (71%), Gaps = 1/117 (0%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISK 73
++CIYPAY+N KKT+AEGRRIP KAV+NPT +I DV + G +E NK+YPRE ++
Sbjct: 1 FICIYPAYLNNKKTIAEGRRIPIDKAVENPTSTEIQDVCAAIGFNVLLEKNKMYPREWNR 60
Query: 74 EHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQR 130
+ RGR R+QLK DDG+P P FPTR++VML+ IPKLK+R K S+Q+ Q+
Sbjct: 61 DVQYRGRVRIQLKQDDGNPCLPQFPTRKSVMLYAAETIPKLKTRTQKMGGSDQSLQQ 117
>gi|77735907|ref|NP_001029650.1| signal recognition particle 19 kDa protein [Bos taurus]
gi|110816430|sp|Q3ZBG7.1|SRP19_BOVIN RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|73586868|gb|AAI03305.1| Signal recognition particle 19kDa [Bos taurus]
gi|296483759|tpg|DAA25874.1| TPA: signal recognition particle 19 kDa protein [Bos taurus]
gi|440900130|gb|ELR51329.1| Signal recognition particle 19 kDa protein [Bos grunniens mutus]
Length = 144
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 89/131 (67%), Gaps = 1/131 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV + GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCAAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R
Sbjct: 61 FLEKNKMYSREWNRDLQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQ 120
Query: 120 KQANSEQNQQR 130
K +Q+ Q+
Sbjct: 121 KTGGGDQSLQQ 131
>gi|356582501|ref|NP_001239220.1| signal recognition particle 19 kDa protein [Canis lupus familiaris]
Length = 144
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 89/131 (67%), Gaps = 1/131 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + + +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPAEQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R
Sbjct: 61 FLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQ 120
Query: 120 KQANSEQNQQR 130
K +Q+ Q+
Sbjct: 121 KTGGGDQSLQQ 131
>gi|351703225|gb|EHB06144.1| Signal recognition particle 19 kDa protein [Heterocephalus glaber]
Length = 144
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 88/131 (67%), Gaps = 1/131 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNA 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R
Sbjct: 61 FLEKNKMYSREWNRDIQYRGRVRVQLKQEDGSLCLGQFPSRKSVMLYAAEMIPKLKTRTQ 120
Query: 120 KQANSEQNQQR 130
K + N Q+
Sbjct: 121 KTGGGDPNLQQ 131
>gi|426232421|ref|XP_004010221.1| PREDICTED: signal recognition particle 19 kDa protein isoform 1
[Ovis aries]
Length = 144
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 89/131 (67%), Gaps = 1/131 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV + GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCAAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R
Sbjct: 61 FLEKNKMYSREWNRDLQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQ 120
Query: 120 KQANSEQNQQR 130
K +Q+ Q+
Sbjct: 121 KTGVGDQSLQQ 131
>gi|296193964|ref|XP_002744754.1| PREDICTED: signal recognition particle 19 kDa protein-like isoform
1 [Callithrix jacchus]
Length = 144
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 91/144 (63%), Gaps = 13/144 (9%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACASARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTAAEIQDVCSAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R
Sbjct: 61 FLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQ 120
Query: 120 KQANSEQNQQRDLSGGGGGGKKQG 143
K +GGG +QG
Sbjct: 121 K------------TGGGDPSLQQG 132
>gi|410922214|ref|XP_003974578.1| PREDICTED: signal recognition particle 19 kDa protein-like
[Takifugu rubripes]
Length = 141
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 87/132 (65%), Gaps = 3/132 (2%)
Query: 6 TKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENK 65
T+ D ER++CIYP YIN KKTLAEGRRIP KAV+NP+ +I DVL+ GL +ENK
Sbjct: 5 TENPADKERFICIYPVYINSKKTLAEGRRIPSEKAVENPSCSEIRDVLTAAGLNVLVENK 64
Query: 66 LYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSE 125
++PRE +++ RGR RVQLK DGS F +R+ VM ++ +IPKLK+R K +
Sbjct: 65 MHPREWNRDVQFRGRVRVQLKQTDGSFCLDKFSSRKDVMFYVAEMIPKLKTRTQKSGGGD 124
Query: 126 QNQQRDLSGGGG 137
N Q+ G GG
Sbjct: 125 INSQQ---GEGG 133
>gi|403256118|ref|XP_003920744.1| PREDICTED: signal recognition particle 19 kDa protein isoform 1
[Saimiri boliviensis boliviensis]
Length = 144
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 91/144 (63%), Gaps = 13/144 (9%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R
Sbjct: 61 FLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQ 120
Query: 120 KQANSEQNQQRDLSGGGGGGKKQG 143
K +GGG +QG
Sbjct: 121 K------------TGGGDPSLQQG 132
>gi|318102156|ref|NP_001187797.1| signal recognition particle 19 kDa protein [Ictalurus punctatus]
gi|308321670|gb|ADO27986.1| signal recognition particle 19 kda protein [Ictalurus furcatus]
gi|308323995|gb|ADO29133.1| signal recognition particle 19 kda protein [Ictalurus punctatus]
Length = 141
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 86/138 (62%), Gaps = 12/138 (8%)
Query: 6 TKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENK 65
T D R++CIYPAYIN KKTLAEGRRIP KAV+NP+ +I DVL+ G+ ENK
Sbjct: 5 TNNPADENRYLCIYPAYINSKKTLAEGRRIPVEKAVENPSCAEIKDVLTAAGMNVRFENK 64
Query: 66 LYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSE 125
LYPRE +++ RGR RVQ+K +DGS F +++ VM ++ +IPKLK+R K
Sbjct: 65 LYPREWNRDVQFRGRVRVQIKQEDGSLCQEKFISKKDVMFYVAEMIPKLKTRTQK----- 119
Query: 126 QNQQRDLSGGGGGGKKQG 143
SGG G +QG
Sbjct: 120 -------SGGSDTGAQQG 130
>gi|432960826|ref|XP_004086484.1| PREDICTED: signal recognition particle 19 kDa protein-like [Oryzias
latipes]
Length = 140
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 84/125 (67%)
Query: 10 TDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPR 69
D ER+VC+YP YIN KKTLAEGRRIP KAV+NP+ +I DVL+ G+ ++ENK++PR
Sbjct: 9 ADKERFVCLYPVYINSKKTLAEGRRIPTEKAVENPSCGEIRDVLTAAGMNVYVENKMHPR 68
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQ 129
E +++ RGR RVQLK DGS F R+ VM+++ +IPKLK+R K + N Q
Sbjct: 69 EWNRDVQFRGRVRVQLKQSDGSLCQDKFKCRKDVMVYVAEMIPKLKTRTQKSGGGDPNSQ 128
Query: 130 RDLSG 134
+ G
Sbjct: 129 QGEGG 133
>gi|157817949|ref|NP_001099627.1| signal recognition particle 19 kDa protein [Rattus norvegicus]
gi|149017170|gb|EDL76221.1| signal recognition particle 19 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|187469798|gb|AAI67043.1| Signal recognition particle 19 [Rattus norvegicus]
Length = 144
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 89/131 (67%), Gaps = 1/131 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPINKAVENPTATEIQDVCSAVGLNA 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML++ +IPKLK+R
Sbjct: 61 FLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYVAEMIPKLKTRTQ 120
Query: 120 KQANSEQNQQR 130
K ++ + Q+
Sbjct: 121 KSGGADPSLQQ 131
>gi|395831768|ref|XP_003788963.1| PREDICTED: signal recognition particle 19 kDa protein [Otolemur
garnettii]
Length = 144
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 88/131 (67%), Gaps = 1/131 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV GL
Sbjct: 1 MACAAVRSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCLAVGLNA 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R
Sbjct: 61 FLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQ 120
Query: 120 KQANSEQNQQR 130
K +Q+ Q+
Sbjct: 121 KTGGGDQSLQQ 131
>gi|344265979|ref|XP_003405058.1| PREDICTED: signal recognition particle 19 kDa protein-like isoform
1 [Loxodonta africana]
Length = 144
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 87/131 (66%), Gaps = 1/131 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP KAV+NPT +I DV GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPINKAVENPTATEIQDVCLAVGLNA 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NKLY RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R
Sbjct: 61 FLEKNKLYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQ 120
Query: 120 KQANSEQNQQR 130
K +Q+ Q+
Sbjct: 121 KTGGGDQSLQQ 131
>gi|47215357|emb|CAG12591.1| unnamed protein product [Tetraodon nigroviridis]
Length = 141
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 87/138 (63%), Gaps = 12/138 (8%)
Query: 6 TKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENK 65
T+ D ER++CIYP YIN KKTLAEGRRIP KAV+NP+ +I DVL+ GL +E+K
Sbjct: 5 TQNPADKERFICIYPVYINSKKTLAEGRRIPSEKAVENPSCSEIRDVLTAAGLNVLVESK 64
Query: 66 LYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSE 125
++PRE +++ RGR RVQLK DGS F +R+ VM ++ +IPKLK+R K
Sbjct: 65 MHPREWNRDVQFRGRVRVQLKQTDGSFCQDKFTSRKDVMFYVAEMIPKLKARTQK----- 119
Query: 126 QNQQRDLSGGGGGGKKQG 143
SGGG +QG
Sbjct: 120 -------SGGGDMSSQQG 130
>gi|209733712|gb|ACI67725.1| Signal recognition particle 19 kDa protein [Salmo salar]
gi|303666761|gb|ADM16240.1| Signal recognition particle 19 kDa protein [Salmo salar]
Length = 141
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 83/118 (70%)
Query: 13 ERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREIS 72
ER++CIYP+Y+N KKTLAEGRR+P KAV+NPT +I DVL+ G +ENK+Y RE S
Sbjct: 12 ERFICIYPSYVNSKKTLAEGRRMPAEKAVENPTCAEIRDVLTAAGANVLVENKMYSREWS 71
Query: 73 KEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQR 130
++ RGR RVQLK +DG+ + F +R+ VM++ +IPKLK+R K A ++ Q+
Sbjct: 72 RDVTFRGRVRVQLKQEDGTLCSDKFASRKDVMIYCAEMIPKLKTRTQKGAGADSGSQQ 129
>gi|126333798|ref|XP_001374129.1| PREDICTED: signal recognition particle 19 kDa protein-like
[Monodelphis domestica]
Length = 143
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/131 (50%), Positives = 89/131 (67%), Gaps = 2/131 (1%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA D + D +R++CIYPAY+N KKT+AEGRRIP KAV+NPT +I DV GL
Sbjct: 1 MAYAD-RSPADKDRFICIYPAYLNNKKTIAEGRRIPMDKAVENPTATEIQDVCLAVGLNV 59
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
H+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R
Sbjct: 60 HVEKNKMYSREWNRDLQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQ 119
Query: 120 KQANSEQNQQR 130
K +Q+ Q+
Sbjct: 120 KTGGGDQSLQQ 130
>gi|16975176|pdb|1JID|A Chain A, Human Srp19 In Complex With Helix 6 Of Human Srp Rna
gi|288965787|pdb|3KTV|B Chain B, Crystal Structure Of The Human Srp19S-Domain Srp Rna
Complex
gi|288965788|pdb|3KTV|D Chain D, Crystal Structure Of The Human Srp19S-Domain Srp Rna
Complex
Length = 128
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 83/118 (70%), Gaps = 1/118 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSR 117
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R
Sbjct: 61 FLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTR 118
>gi|348536084|ref|XP_003455527.1| PREDICTED: signal recognition particle 19 kDa protein-like
[Oreochromis niloticus]
Length = 141
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 89/138 (64%), Gaps = 12/138 (8%)
Query: 6 TKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENK 65
T+ D ER+VC+YP YIN KKTLAEGRRI KAV+NP+ +I DVL+ G+ ++ENK
Sbjct: 5 TQNPADKERFVCLYPVYINSKKTLAEGRRISVEKAVENPSCTEIRDVLAAAGMNVYMENK 64
Query: 66 LYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSE 125
++PRE +++ +GR RVQ+K DGSP F +R+ VM+++ +IPKLK+R K
Sbjct: 65 IHPREWNRDGQFKGRVRVQIKQADGSPCQDKFSSRKDVMIYVAEMIPKLKTRTQK----- 119
Query: 126 QNQQRDLSGGGGGGKKQG 143
SGGG +QG
Sbjct: 120 -------SGGGDTSSQQG 130
>gi|431907955|gb|ELK11562.1| Signal recognition particle 19 kDa protein [Pteropus alecto]
Length = 144
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 88/131 (67%), Gaps = 1/131 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCLAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ +GR RVQLK +DGS FP+R++VML+ +IPKLK+R
Sbjct: 61 FLEKNKMYSREWNRDVQYKGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQ 120
Query: 120 KQANSEQNQQR 130
K +Q+ Q+
Sbjct: 121 KTGGGDQSLQQ 131
>gi|213514416|ref|NP_001134585.1| signal recognition particle 19 kDa protein [Salmo salar]
gi|209734480|gb|ACI68109.1| Signal recognition particle 19 kDa protein [Salmo salar]
gi|209737260|gb|ACI69499.1| Signal recognition particle 19 kDa protein [Salmo salar]
Length = 141
Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 83/118 (70%)
Query: 13 ERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREIS 72
ER++CIYP+Y+N KKTLAEGRRIP KAV+NPT +I DVL+ G +ENK+Y RE +
Sbjct: 12 ERFICIYPSYVNSKKTLAEGRRIPAEKAVENPTCAEIRDVLTAAGANVLVENKMYSREWN 71
Query: 73 KEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQR 130
++ RGR RVQLK +DG+ + F +R+ VM++ +IPKLK+R K A ++ Q+
Sbjct: 72 RDVTFRGRVRVQLKQEDGTLCSDKFASRKDVMIYCAEMIPKLKTRTQKGAGADSGSQQ 129
>gi|291410677|ref|XP_002721616.1| PREDICTED: signal recognition particle 19kDa [Oryctolagus
cuniculus]
Length = 144
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 92/144 (63%), Gaps = 13/144 (9%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + + +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPAEQDRFICIYPAYLNNKKTIAEGRRIPVSKAVENPTATEIQDVCSAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ +GR RVQLK +DGS FP+R++VML++ +IPKLK+R
Sbjct: 61 LLEKNKMYSREWNRDVQYKGRVRVQLKQEDGSLCLLQFPSRKSVMLYVAEMIPKLKTRTQ 120
Query: 120 KQANSEQNQQRDLSGGGGGGKKQG 143
K +GGG +QG
Sbjct: 121 K------------AGGGDPSLQQG 132
>gi|209738170|gb|ACI69954.1| Signal recognition particle 19 kDa protein [Salmo salar]
Length = 141
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 82/118 (69%)
Query: 13 ERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREIS 72
ER++CIYP+Y+N KKTLAEGRRIP KAV+NPT +I DVL+ G +ENK+Y RE +
Sbjct: 12 ERFICIYPSYVNSKKTLAEGRRIPAEKAVENPTCAEIRDVLTAAGANVLVENKMYSREWN 71
Query: 73 KEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQR 130
++ RGR RVQLK +DG+ + F +R+ VM + +IPKLK+R K A ++ Q+
Sbjct: 72 RDVTFRGRVRVQLKQEDGTLCSDKFASRKDVMTYCAEMIPKLKTRTQKGAGADSGSQQ 129
>gi|225706546|gb|ACO09119.1| Signal recognition particle 19 kDa protein [Osmerus mordax]
Length = 157
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/133 (46%), Positives = 85/133 (63%), Gaps = 12/133 (9%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPRE 70
D +R++CIYPAY+N KKTLAEGRRIP KA +NPT +I DVL+ G +EN +Y RE
Sbjct: 10 DKDRYICIYPAYVNSKKTLAEGRRIPSEKAAENPTCVEIRDVLTAAGANILVENSMYSRE 69
Query: 71 ISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQR 130
+++ RGR RVQ+K +DG+ + F TR+ VM+++ +IPKLK+R K
Sbjct: 70 WNRDVTFRGRVRVQMKQEDGTLCSDKFATRKDVMIYVAEMIPKLKTRSQK---------- 119
Query: 131 DLSGGGGGGKKQG 143
SGG G +QG
Sbjct: 120 --SGGADSGSQQG 130
>gi|209733628|gb|ACI67683.1| Signal recognition particle 19 kDa protein [Salmo salar]
Length = 141
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 82/118 (69%)
Query: 13 ERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREIS 72
ER++CIYP+Y+N KKTLAEGRRIP KAV+NP +I DVL+ G +ENK+Y RE +
Sbjct: 12 ERFICIYPSYVNSKKTLAEGRRIPAEKAVENPACAEIRDVLTAAGANVLVENKMYSREWN 71
Query: 73 KEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQR 130
++ RGR RVQLK +DG+ + F +R+ VM++ +IPKLK+R K A ++ Q+
Sbjct: 72 RDVTFRGRVRVQLKQEDGTLCSDKFASRKDVMIYCAEMIPKLKTRTQKGAGADSGSQQ 129
>gi|72043106|ref|XP_784942.1| PREDICTED: signal recognition particle 19 kDa protein-like
[Strongylocentrotus purpuratus]
Length = 142
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 85/130 (65%), Gaps = 2/130 (1%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + T D RW+CIYPAYIN KKT+AEGR+IPK +A++NPT ++ DV + GL
Sbjct: 1 MAHLSTNP-ADKNRWICIYPAYINSKKTVAEGRKIPKERALENPTLAELRDVCQSVGLPV 59
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E +K+YPR+ +++ RGR RVQLKN DG+ V F TR+ VM L IP LKSR
Sbjct: 60 AMEGSKMYPRDQNRDPTFRGRVRVQLKNADGTYVLEQFKTRQDVMFQLTERIPMLKSRTQ 119
Query: 120 KQANSEQNQQ 129
KQ EQ Q
Sbjct: 120 KQGGGEQQPQ 129
>gi|259089257|ref|NP_001158666.1| signal recognition particle 19 kDa protein [Oncorhynchus mykiss]
gi|225705696|gb|ACO08694.1| Signal recognition particle 19 kDa protein [Oncorhynchus mykiss]
Length = 141
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 83/118 (70%)
Query: 13 ERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREIS 72
+R++CIYP+Y+N KKTLAEGR+IP KAV+NPT +I DVL+ G +ENK+Y RE +
Sbjct: 12 DRFICIYPSYVNSKKTLAEGRQIPAEKAVENPTCAEIRDVLTAAGANVLVENKMYSREWN 71
Query: 73 KEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQR 130
++ RGR RVQLK +DG+ + F +R+ VM++ +IPKLK+R K A ++ Q+
Sbjct: 72 RDATFRGRVRVQLKQEDGTLCSDKFASRKDVMIYCAEMIPKLKTRTQKGAGADSGSQQ 129
>gi|27728702|gb|AAO18673.1| signal recognition particle 19 kDa protein [Branchiostoma belcheri
tsingtauense]
Length = 141
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
Query: 7 KKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKL 66
K +D +R++CIYPAYIN +KT+ +GRRIP+ K VDNPT +I DVL G +ENK
Sbjct: 5 KPFSDKDRFICIYPAYINSRKTIPQGRRIPQEKGVDNPTATEIRDVLQAGGFNIVLENKA 64
Query: 67 YPREI-SKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSR 117
Y RE+ ++ +RGR RVQLKNDDGS VN +P R++V L++ IPKLK+R
Sbjct: 65 YTRELFHRDQNLRGRVRVQLKNDDGSAVNDKYPNRKSVYLYVAETIPKLKTR 116
>gi|21542243|sp|Q9D7A6.1|SRP19_MOUSE RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|12844192|dbj|BAB26271.1| unnamed protein product [Mus musculus]
Length = 144
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 86/126 (68%), Gaps = 1/126 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++ IYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACSAARPPADQDRFIFIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNA 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML++ +IPKLK+R
Sbjct: 61 FLEKNKMYSREWNRDVQFRGRVRVQLKQEDGSLCLVQFPSRKSVMLYVAEMIPKLKTRTQ 120
Query: 120 KQANSE 125
K ++
Sbjct: 121 KSGGAD 126
>gi|395749932|ref|XP_002828302.2| PREDICTED: uncharacterized protein LOC100455968 [Pongo abelii]
Length = 283
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 90/142 (63%), Gaps = 6/142 (4%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACTAVRFPAKQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSEVGLNI 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ RGR RVQLK +DGS FP+ ++VML+ +IPKLK R
Sbjct: 61 FLEKNKMYSREWNRDVHYRGRVRVQLKQEDGSLCLVQFPSCKSVMLYAAEIIPKLKRRTQ 120
Query: 120 KQANSEQNQQRDLSGGGGGGKK 141
K +Q+ Q+ G G KK
Sbjct: 121 KTGGGDQSLQQ-----GEGSKK 137
>gi|260803340|ref|XP_002596548.1| hypothetical protein BRAFLDRAFT_267682 [Branchiostoma floridae]
gi|229281806|gb|EEN52560.1| hypothetical protein BRAFLDRAFT_267682 [Branchiostoma floridae]
Length = 141
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
Query: 7 KKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKL 66
K ++D +R++CIYPAYIN ++T+ +GRRIP+ K VDNPT +I DVL G +ENK
Sbjct: 5 KPYSDKDRFICIYPAYINSRRTIPQGRRIPQEKGVDNPTATEIRDVLQAGGFTIVLENKA 64
Query: 67 YPREI-SKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSR 117
Y +E+ ++ +RGR RVQLKNDDGSPVN +P R++V L++ IPKLK+R
Sbjct: 65 YAKELFHRDPNLRGRIRVQLKNDDGSPVNDKYPNRKSVYLYVAETIPKLKTR 116
>gi|24159062|pdb|1MFQ|B Chain B, Crystal Structure Analysis Of A Ternary S-Domain Complex
Of Human Signal Recognition Particle
gi|48425475|pdb|1RY1|B Chain B, Structure Of The Signal Recognition Particle Interacting
With The Elongation-Arrested Ribosome
gi|110590374|pdb|2GO5|B Chain B, Structure Of Signal Recognition Particle Receptor (Sr) In
Complex With Signal Recognition Particle (Srp) And
Ribosome Nascent Chain Complex
gi|119390385|pdb|2J37|B Chain B, Model Of Mammalian Srp Bound To 80s Rncs
Length = 108
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 78/105 (74%), Gaps = 1/105 (0%)
Query: 14 RWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREIS 72
R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL +E NK+Y RE +
Sbjct: 2 RFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNVFLEKNKMYSREWN 61
Query: 73 KEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSR 117
++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R
Sbjct: 62 RDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTR 106
>gi|58331946|ref|NP_001011122.1| signal recognition particle 19kDa [Xenopus (Silurana) tropicalis]
gi|54038270|gb|AAH84521.1| signal recognition particle 19 [Xenopus (Silurana) tropicalis]
gi|89273857|emb|CAJ81643.1| signal recognition particle [Xenopus (Silurana) tropicalis]
Length = 142
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 89/138 (64%), Gaps = 5/138 (3%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA ++ K H V+R++CIYPAY+N KKT+AEGRRIP KAV NPT +I D+ L
Sbjct: 1 MANLE-KSHASVDRFICIYPAYLNSKKTIAEGRRIPIEKAVQNPTCSEIADICRANKLNA 59
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E +K+Y RE +++ RGR RVQL+N+DGS +R+A+ML + IPKLK+R
Sbjct: 60 VVEGDKMYTREWNRDTQFRGRVRVQLRNEDGSSCVDKLSSRKAIMLRVAEEIPKLKTRTQ 119
Query: 120 KQANSEQNQQRDLSGGGG 137
K +Q+ Q+ G GG
Sbjct: 120 KSGGGDQSAQQ---GEGG 134
>gi|170590085|ref|XP_001899803.1| Signal recognition particle 19 kDa protein [Brugia malayi]
gi|158592722|gb|EDP31319.1| Signal recognition particle 19 kDa protein, putative [Brugia
malayi]
Length = 146
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 83/114 (72%), Gaps = 1/114 (0%)
Query: 6 TKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-N 64
TK +D RW+CIYP Y+N +KT+A+GRR+ K KAVD+PT ++I D+LS GLK +E
Sbjct: 7 TKALSDECRWICIYPLYMNSRKTVAQGRRVSKNKAVDSPTAQEIFDILSNAGLKVKLEKQ 66
Query: 65 KLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
K++P + +++ +GR RVQL NDDGS + FPTR ++ML+ ++PKLK+RQ
Sbjct: 67 KMHPLDPNRDANSQGRVRVQLHNDDGSLCDQKFPTRMSLMLYACEMVPKLKTRQ 120
>gi|148229874|ref|NP_001088221.1| signal recognition particle 19kDa [Xenopus laevis]
gi|54038561|gb|AAH84166.1| LOC495049 protein [Xenopus laevis]
Length = 142
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 88/138 (63%), Gaps = 5/138 (3%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA ++ K V+R++CIYPAY+N KKT+AEGRRIP KAV NPT +I D+ L
Sbjct: 1 MANLE-KSPASVDRFICIYPAYLNSKKTIAEGRRIPIEKAVQNPTCLEIADICRANKLNV 59
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E +K+Y RE +++ RGR RVQLKN+DG+ +R+AVML + IPKLK+R
Sbjct: 60 VVEGDKMYTREWNRDAQFRGRVRVQLKNEDGTVCVEKLSSRKAVMLRVAEEIPKLKTRTQ 119
Query: 120 KQANSEQNQQRDLSGGGG 137
K +Q+ Q+ G GG
Sbjct: 120 KSGGGDQSAQQ---GEGG 134
>gi|225713888|gb|ACO12790.1| Signal recognition particle 19 kDa protein [Lepeophtheirus
salmonis]
Length = 160
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 83/125 (66%), Gaps = 4/125 (3%)
Query: 7 KKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGL-KYHIENK 65
K H D ERWV IYP Y+N+ +TL EGRRI K+ V+NPTY +I D L G K+ I++K
Sbjct: 18 KGHADPERWVSIYPTYLNKNRTLKEGRRIEKSICVENPTYSEIRDALLQGGWNKFLIQDK 77
Query: 66 LYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK---QA 122
YPRE S+E RG+ RVQLK+++G + ++PTR +++ +LG IPK++ Q K A
Sbjct: 78 EYPRERSREMLYRGKIRVQLKDEEGEALREEYPTRASILHYLGKEIPKIRETQKKAQISA 137
Query: 123 NSEQN 127
SE N
Sbjct: 138 KSEAN 142
>gi|355721864|gb|AES07402.1| signal recognition particle 19kDa [Mustela putorius furo]
Length = 109
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 76/109 (69%), Gaps = 1/109 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLG 108
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML++
Sbjct: 61 FLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYVA 109
>gi|312084922|ref|XP_003144473.1| signal recognition particle protein [Loa loa]
gi|307760363|gb|EFO19597.1| SRP19 protein [Loa loa]
Length = 146
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 83/114 (72%), Gaps = 1/114 (0%)
Query: 6 TKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-N 64
TK ++ +W+CIYP Y+N +KT+A+GRR+ K KAVD+PT ++I D+LS G+K +E
Sbjct: 7 TKPPSEECKWICIYPLYMNSRKTIAQGRRVNKNKAVDSPTAQEIYDILSNAGMKVKLEKQ 66
Query: 65 KLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
K++P + +++ +GR RVQL NDDGS + FPTR ++ML+ ++PKLK+RQ
Sbjct: 67 KMHPLDPNRDANAQGRVRVQLWNDDGSLCDEKFPTRMSLMLYACEMVPKLKTRQ 120
>gi|397514169|ref|XP_003827368.1| PREDICTED: LOW QUALITY PROTEIN: signal recognition particle 19 kDa
protein-like [Pan paniscus]
Length = 203
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 81/119 (68%), Gaps = 1/119 (0%)
Query: 13 ERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREI 71
+R++CIYPA++N KKT+AEGRRIP +KAV+NPT +I DV S GL +E N +Y RE
Sbjct: 72 DRFICIYPAFLNNKKTIAEGRRIPTSKAVENPTATEIQDVCSEVGLNVFLEKNXMYSREW 131
Query: 72 SKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQR 130
+++ RG RVQL +DGS FP+ ++VML+ +IPKLK R K+ +Q+ Q+
Sbjct: 132 NRDVQYRGSKRVQLTQEDGSLCLVQFPSCKSVMLYAAEIIPKLKRRTQKRGGGDQSLQQ 190
>gi|226372736|gb|ACO51993.1| Signal recognition particle 19 kDa protein [Rana catesbeiana]
Length = 142
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 85/132 (64%), Gaps = 4/132 (3%)
Query: 7 KKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NK 65
K +TD R++CIYPAYIN KKT+AEGRRIP +AV NPT +I DV L IE +K
Sbjct: 6 KLYTDPSRFICIYPAYINNKKTIAEGRRIPIERAVQNPTCTEIADVCRANKLNAIIEADK 65
Query: 66 LYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSE 125
+Y RE +++ +GR RVQL+N+DG+P +R+A+M+ + IPKLK+R K +
Sbjct: 66 MYTREWNRDVQYKGRVRVQLRNEDGTPCVEKLQSRKAIMIRVAEEIPKLKTRTQKTGGGD 125
Query: 126 QNQQRDLSGGGG 137
Q Q+ G GG
Sbjct: 126 QAVQQ---GEGG 134
>gi|221110583|ref|XP_002156611.1| PREDICTED: signal recognition particle 19 kDa protein-like [Hydra
magnipapillata]
Length = 140
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 81/122 (66%), Gaps = 1/122 (0%)
Query: 5 DTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE- 63
+T + +RWV IYP+YIN +T EGR+I K+KAV+NP +I DVL +E
Sbjct: 4 NTSDPSSQQRWVIIYPSYINSCRTKEEGRKIAKSKAVENPKAAEIRDVLQYHNFNTLLEE 63
Query: 64 NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQAN 123
NK YPR+ K+ +GR +VQ+K DG+PV+ +PTR+A+ML L +IPKLK RQ K A+
Sbjct: 64 NKQYPRDSFKDALCKGRVKVQIKQADGTPVSLQYPTRKALMLLLAEMIPKLKGRQLKGAS 123
Query: 124 SE 125
+E
Sbjct: 124 AE 125
>gi|301631119|ref|XP_002944654.1| PREDICTED: signal recognition particle 19 kDa protein-like, partial
[Xenopus (Silurana) tropicalis]
Length = 129
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 80/124 (64%), Gaps = 4/124 (3%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISK 73
++CIYPAY+N KKT+AEGRRIP KAV NPT +I D+ L +E +K+Y RE ++
Sbjct: 1 FICIYPAYLNSKKTIAEGRRIPIEKAVQNPTCSEIADICRANKLNAVVEGDKMYTREWNR 60
Query: 74 EHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQRDLS 133
+ RGR RVQL+N+DGS +R+A+ML + IPKLK+R K +Q+ Q+
Sbjct: 61 DTQFRGRVRVQLRNEDGSSCVDKLSSRKAIMLRVAEEIPKLKTRTQKSGGGDQSAQQ--- 117
Query: 134 GGGG 137
G GG
Sbjct: 118 GEGG 121
>gi|350580991|ref|XP_003480938.1| PREDICTED: signal recognition particle 19 kDa protein-like [Sus
scrofa]
Length = 110
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGA 109
+E NK+Y RE +++ RGR RVQLK +DGS FP+ + L G+
Sbjct: 61 FLEKNKMYSREWNRDLQYRGRVRVQLKQEDGSLCLVQFPSHYTMSLTFGS 110
>gi|56756100|gb|AAW26228.1| SJCHGC02662 protein [Schistosoma japonicum]
gi|226489763|emb|CAX75032.1| Signal recognition particle protein 19 [Schistosoma japonicum]
gi|226489767|emb|CAX75034.1| Signal recognition particle protein 19 [Schistosoma japonicum]
Length = 148
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 80/122 (65%), Gaps = 1/122 (0%)
Query: 9 HTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYP 68
H+ ERW+C+YPAY+N ++T A+GR++ VDNP + ++ +L L Y +E K++P
Sbjct: 15 HSAKERWICVYPAYLNNRRTRAQGRKLSVEHCVDNPKHSEVTMILGKLSLDYLLETKVHP 74
Query: 69 REI-SKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQN 127
+E + E + R RV LKNDDGSPVN FP R++++ +LG +P ++SR+ ++S
Sbjct: 75 KERDAFEPMNKWRVRVHLKNDDGSPVNEQFPNRQSLLTYLGKALPVVRSRRPATSSSSTT 134
Query: 128 QQ 129
+Q
Sbjct: 135 EQ 136
>gi|119569382|gb|EAW48997.1| hCG2039564, isoform CRA_a [Homo sapiens]
Length = 104
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 71/104 (68%), Gaps = 1/104 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAV 103
+E NK+Y RE +++ RGR RVQLK +DGS FP+R+ V
Sbjct: 61 FLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKLV 104
>gi|296193966|ref|XP_002744755.1| PREDICTED: signal recognition particle 19 kDa protein-like isoform
2 [Callithrix jacchus]
Length = 110
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACASARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTAAEIQDVCSAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGA 109
+E NK+Y RE +++ RGR RVQLK +DGS FP+ + L G+
Sbjct: 61 FLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSHYTLSLTSGS 110
>gi|426349646|ref|XP_004042402.1| PREDICTED: signal recognition particle 19 kDa protein [Gorilla
gorilla gorilla]
gi|426349650|ref|XP_004042404.1| PREDICTED: signal recognition particle 19 kDa protein [Gorilla
gorilla gorilla]
Length = 110
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACATARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGA 109
+E NK+Y RE +++ RGR RVQLK +DGS FP+ + L G+
Sbjct: 61 FLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSHYTLSLTSGS 110
>gi|403256120|ref|XP_003920745.1| PREDICTED: signal recognition particle 19 kDa protein isoform 2
[Saimiri boliviensis boliviensis]
Length = 110
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGA 109
+E NK+Y RE +++ RGR RVQLK +DGS FP+ + L G+
Sbjct: 61 FLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSHCTLSLTSGS 110
>gi|338713361|ref|XP_003362885.1| PREDICTED: signal recognition particle 19 kDa protein-like isoform
2 [Equus caballus]
Length = 112
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/112 (49%), Positives = 72/112 (64%), Gaps = 3/112 (2%)
Query: 1 MATIDTKKHTDVERWV--CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGL 58
MA + + +RWV CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPAEQDRWVSFCIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGL 60
Query: 59 KYHIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGA 109
+E NK+Y RE +++ RGR RVQLK +DGS FP+ + L G+
Sbjct: 61 NVFLERNKMYSREWNRDAQYRGRVRVQLKQEDGSLCLVQFPSHYTLSLTFGS 112
>gi|323510705|ref|NP_001191128.1| signal recognition particle 19 kDa protein isoform 6 [Homo sapiens]
gi|332221467|ref|XP_003259882.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 isoform 4 [Nomascus
leucogenys]
gi|119569381|gb|EAW48996.1| hCG2040106 [Homo sapiens]
Length = 101
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTR 100
+E NK+Y RE +++ RGR RVQLK +DGS FP+R
Sbjct: 61 FLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSR 101
>gi|323510696|ref|NP_001191122.1| signal recognition particle 19 kDa protein isoform 2 [Homo sapiens]
gi|332221463|ref|XP_003259880.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 isoform 2 [Nomascus
leucogenys]
gi|441598669|ref|XP_004087474.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 [Nomascus leucogenys]
gi|116284337|gb|AAH17830.1| SRP19 protein [Homo sapiens]
gi|119569385|gb|EAW49000.1| hCG2039564, isoform CRA_d [Homo sapiens]
Length = 110
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGA 109
+E NK+Y RE +++ RGR RVQLK +DGS FP+ + L G+
Sbjct: 61 FLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSHYTLSLTSGS 110
>gi|226489769|emb|CAX75035.1| Signal recognition particle protein 19 [Schistosoma japonicum]
Length = 148
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 80/122 (65%), Gaps = 1/122 (0%)
Query: 9 HTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYP 68
H+ ERW+C+YPAY+N ++T A+GR++ VDNP + ++ +L L Y +E K++P
Sbjct: 15 HSAKERWICVYPAYLNNRRTRAQGRKLSVEHCVDNPKHSEVTMILGKLSLDYLLETKVHP 74
Query: 69 REI-SKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQN 127
++ + E + R RV LKNDDGSPVN FP R++++ +LG +P ++SR+ ++S
Sbjct: 75 KKRDAFEPMNKWRVRVHLKNDDGSPVNEQFPNRQSLLTYLGKALPVVRSRRPATSSSSTT 134
Query: 128 QQ 129
+Q
Sbjct: 135 EQ 136
>gi|196001153|ref|XP_002110444.1| hypothetical protein TRIADDRAFT_22815 [Trichoplax adhaerens]
gi|190586395|gb|EDV26448.1| hypothetical protein TRIADDRAFT_22815 [Trichoplax adhaerens]
Length = 151
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 76/119 (63%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
M+ K + +RW+C+YP YI++ K + EGRR+ K KA +NPT ++I D+ + G
Sbjct: 1 MSAYLPKDPSAPQRWICVYPVYIDKNKKIPEGRRVCKEKACENPTAEEIRDICRSQGFDA 60
Query: 61 HIENKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
IE K YPR ++ +GR R+++ N+D + NP F TR+ +++ +G +IPKLKSRQ
Sbjct: 61 EIERKQYPRNSYFDNPSKGRVRIRMFNNDQTLANPKFKTRKQLLVFIGEMIPKLKSRQA 119
>gi|291396420|ref|XP_002714443.1| PREDICTED: signal recognition particle 19kDa [Oryctolagus
cuniculus]
Length = 147
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 79/125 (63%), Gaps = 5/125 (4%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDD----VLSTT 56
MA + D +R++CIYP Y+N KKT+AEGR IP +KAV+NPT ++ D V S
Sbjct: 1 MACAIVQSLADQDRFMCIYPVYLNNKKTIAEGRWIPISKAVENPTATELQDVRSGVCSAV 60
Query: 57 GLKYHIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLK 115
GL +E NK+Y RE +++ RGRA+VQL +DGS FP+ ++VML+ + P LK
Sbjct: 61 GLHVFLEKNKMYSRERNRDVQYRGRAQVQLSQEDGSLYLVQFPSCKSVMLYAAEMTPNLK 120
Query: 116 SRQGK 120
+R K
Sbjct: 121 TRAQK 125
>gi|426232423|ref|XP_004010222.1| PREDICTED: signal recognition particle 19 kDa protein isoform 2
[Ovis aries]
Length = 110
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV + GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCAAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGA 109
+E NK+Y RE +++ RGR RVQLK +DGS FP+ + L G+
Sbjct: 61 FLEKNKMYSREWNRDLQYRGRVRVQLKQEDGSLCLVQFPSLYILSLTSGS 110
>gi|390459738|ref|XP_003732359.1| PREDICTED: signal recognition particle 19 kDa protein-like
[Callithrix jacchus]
Length = 129
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACASARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTAAEIQDVCSAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPT 99
+E NK+Y RE +++ RGR RVQLK +DGS FP+
Sbjct: 61 FLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPS 100
>gi|410949074|ref|XP_003981249.1| PREDICTED: signal recognition particle 19 kDa protein isoform 3
[Felis catus]
Length = 103
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPT 99
+E NK+Y RE +++ RGR RVQLK +DGS FP+
Sbjct: 61 FLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPS 100
>gi|335283330|ref|XP_003123883.2| PREDICTED: signal recognition particle 19 kDa protein-like isoform
1 [Sus scrofa]
Length = 114
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPT 99
+E NK+Y RE +++ RGR RVQLK +DGS FP+
Sbjct: 61 FLEKNKMYSREWNRDLQYRGRVRVQLKQEDGSLCLVQFPS 100
>gi|348587418|ref|XP_003479465.1| PREDICTED: signal recognition particle 19 kDa protein-like [Cavia
porcellus]
Length = 151
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNA 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPT 99
IE NK+Y RE +++ RGR RVQLK +DGS FP+
Sbjct: 61 FIEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLGQFPS 100
>gi|256075186|ref|XP_002573901.1| signal recognition particle 19 kD protein [Schistosoma mansoni]
gi|353231948|emb|CCD79303.1| putative signal recognition particle 19 kD protein [Schistosoma
mansoni]
Length = 148
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 73/107 (68%), Gaps = 1/107 (0%)
Query: 13 ERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREI- 71
ERWVC+YPAY+N ++T A+GR++ VDNP + ++ +L L Y +E K++P+E
Sbjct: 19 ERWVCVYPAYLNNRRTRAQGRKLSVEHCVDNPKHSEVTMILGKLSLDYLLETKVHPKERD 78
Query: 72 SKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
+ E + R RV LKNDDGSPVN FP R++++ +LG +P ++SR+
Sbjct: 79 AFEPMNKWRVRVHLKNDDGSPVNEQFPNRQSLLSYLGKALPVVRSRR 125
>gi|341883181|gb|EGT39116.1| hypothetical protein CAEBREN_16712 [Caenorhabditis brenneri]
Length = 143
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 73/107 (68%), Gaps = 2/107 (1%)
Query: 13 ERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREI 71
+RWV IYPAYI++KKT +GRRI K AV+NPT +I DVL+ G +E K YPR+
Sbjct: 14 KRWVVIYPAYIDKKKTTKQGRRISKLLAVENPTSVEIHDVLAAVGFNPLLERTKCYPRDG 73
Query: 72 SKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
+++ V+GR R QLKNDDG+P + TRE V + +IPKLK+RQ
Sbjct: 74 ERDYEVQGRVRFQLKNDDGTPKHAQ-KTREEVFKMVADMIPKLKTRQ 119
>gi|308498441|ref|XP_003111407.1| hypothetical protein CRE_03666 [Caenorhabditis remanei]
gi|308240955|gb|EFO84907.1| hypothetical protein CRE_03666 [Caenorhabditis remanei]
Length = 142
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 78/120 (65%), Gaps = 3/120 (2%)
Query: 1 MAT-IDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLK 59
MAT + + + +RWV IYPAYI++KKT +GR+I K AVDNPT +I DVL+ G
Sbjct: 1 MATGLSAEPLSSQKRWVVIYPAYIDKKKTTKQGRKISKLLAVDNPTSAEIHDVLAAVGFN 60
Query: 60 YHIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
+E K YPR+ ++ V+GR RVQLKNDDG+P + TR+ V +IPKLK+RQ
Sbjct: 61 PLLERTKCYPRDGDRDFEVQGRVRVQLKNDDGTPKHAQ-KTRDEVFKLAAEMIPKLKTRQ 119
>gi|224121158|ref|XP_002318513.1| predicted protein [Populus trichocarpa]
gi|222859186|gb|EEE96733.1| predicted protein [Populus trichocarpa]
Length = 136
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 76/133 (57%), Gaps = 5/133 (3%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
++++WV +YP YIN KKT+AEGRRI KA +NPT +I D L + IE +K YPR
Sbjct: 8 NIKKWVVLYPVYINSKKTIAEGRRISAEKACENPTCVEIGDCCGHLKLPFAIEIDKAYPR 67
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQ 129
+ + GR RV LK +DGS NP P+R+ +M H+ L+P+ R KQ +
Sbjct: 68 DFMQV----GRVRVLLKREDGSLCNPAIPSRKQLMFHVAELVPRHPGRTKKQEPASTANV 123
Query: 130 RDLSGGGGGGKKQ 142
G GG KK+
Sbjct: 124 STSKSGKGGRKKR 136
>gi|357164229|ref|XP_003579989.1| PREDICTED: signal recognition particle 19 kDa protein-like
[Brachypodium distachyon]
Length = 139
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
Query: 10 TDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYP 68
+ +++W IYP Y+N KKT+AEGRRI AKA +PT +I D + + IE +K YP
Sbjct: 10 SSIKKWNVIYPVYLNSKKTVAEGRRIAAAKACADPTCSEILDSCTYLKIPCKIEQDKAYP 69
Query: 69 REISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQ 121
R+ F RGR RVQL+N+DGSPVNP T++ +M+ + L+PK + R KQ
Sbjct: 70 RDF----FQRGRVRVQLQNEDGSPVNPAIRTKKQLMIQIAELVPKHQGRTKKQ 118
>gi|351725015|ref|NP_001235798.1| uncharacterized protein LOC100500027 [Glycine max]
gi|255628607|gb|ACU14648.1| unknown [Glycine max]
Length = 137
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 83/140 (59%), Gaps = 5/140 (3%)
Query: 4 IDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE 63
+D + +++++W+ +YP YIN KKT+AEGRRI AKA +NPT +I D S L + IE
Sbjct: 1 MDGAELSNIKKWIVMYPVYINSKKTMAEGRRIGLAKACENPTCAEIGDCCSYLKLPFAIE 60
Query: 64 -NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQA 122
+K YPR+ + RGR RV LK +DG+ N +R+ +M+ + ++P+ R KQ
Sbjct: 61 IDKAYPRDFMQ----RGRVRVLLKKEDGTLFNSTISSRKQLMVKVAEMVPRHHGRTKKQE 116
Query: 123 NSEQNQQRDLSGGGGGGKKQ 142
S + + G GGKK+
Sbjct: 117 TSSTSTAGPSTKSGKGGKKR 136
>gi|357164226|ref|XP_003579988.1| PREDICTED: signal recognition particle 19 kDa protein-like
[Brachypodium distachyon]
Length = 139
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
Query: 10 TDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYP 68
+ +++W IYP Y+N KKT+AEGRRI AKA +PT +I D + + IE +K YP
Sbjct: 10 SSIKKWNVIYPVYLNSKKTVAEGRRIAAAKACADPTCNEILDSCTYLKIPCKIEQDKAYP 69
Query: 69 REISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQ 121
R+ F RGR RVQL+N+DGSPVNP T++ +M+ + L+PK + R KQ
Sbjct: 70 RDF----FQRGRVRVQLQNEDGSPVNPAIRTKKQLMIQIAELVPKHQGRTKKQ 118
>gi|226532524|ref|NP_001148793.1| signal recognition particle 19 kDa protein [Zea mays]
gi|194696834|gb|ACF82501.1| unknown [Zea mays]
gi|195609450|gb|ACG26555.1| signal recognition particle 19 kDa protein [Zea mays]
gi|195622204|gb|ACG32932.1| signal recognition particle 19 kDa protein [Zea mays]
gi|195628030|gb|ACG35845.1| signal recognition particle 19 kDa protein [Zea mays]
gi|195649103|gb|ACG44019.1| signal recognition particle 19 kDa protein [Zea mays]
gi|223975521|gb|ACN31948.1| unknown [Zea mays]
gi|223975625|gb|ACN32000.1| unknown [Zea mays]
gi|414584853|tpg|DAA35424.1| TPA: Signal recognition particle protein isoform 1 [Zea mays]
gi|414584854|tpg|DAA35425.1| TPA: Signal recognition particle protein isoform 2 [Zea mays]
gi|414586985|tpg|DAA37556.1| TPA: Signal recognition particle protein isoform 1 [Zea mays]
gi|414586986|tpg|DAA37557.1| TPA: Signal recognition particle protein isoform 2 [Zea mays]
Length = 146
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 77/130 (59%), Gaps = 13/130 (10%)
Query: 1 MATIDTKKHTD--------VERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDV 52
MAT +T + D +++W IYP Y+N KKT+AEGRRI AKA +PT +I D
Sbjct: 1 MATSNTARMEDGGGDLRSTIKKWNIIYPVYLNSKKTVAEGRRIAAAKACPDPTCIEIADC 60
Query: 53 LSTTGLKYHIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALI 111
S + + IE +K YPR+ F GR RVQLK DDGSPVNP T++ +M+ + L+
Sbjct: 61 CSHLKIPHAIELDKAYPRDF----FQVGRVRVQLKKDDGSPVNPAIKTKKQLMIQVAELV 116
Query: 112 PKLKSRQGKQ 121
PK R KQ
Sbjct: 117 PKHHGRTKKQ 126
>gi|148909466|gb|ABR17831.1| unknown [Picea sitchensis]
Length = 154
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 3 TIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI 62
TI + +++RW+ IYP YIN KKTLAEGRRI KA +NPT +I D L I
Sbjct: 15 TIMEEDQPNIKRWIVIYPVYINSKKTLAEGRRIRAKKACENPTCVEIADSCIYLKLPCVI 74
Query: 63 E-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQ 121
E +K YPR+ + RGR RVQLK +DGS VNP P+R+ +ML + ++P+ R KQ
Sbjct: 75 EADKAYPRDFMQ----RGRVRVQLKREDGSLVNPAIPSRKELMLRIAEMVPRHHGRIKKQ 130
Query: 122 ANS 124
+
Sbjct: 131 EQA 133
>gi|168059929|ref|XP_001781952.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666598|gb|EDQ53248.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 135
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 69/115 (60%), Gaps = 5/115 (4%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
D RWV IYP YIN KKTLAEGRRI +KA +NPT +I D L IE +K Y R
Sbjct: 3 DTSRWVVIYPVYINSKKTLAEGRRICASKACENPTVVEIGDCCQYLRLPCAIEIDKAYSR 62
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANS 124
+ + RGR RVQLK DDG+ VN P+R+ + L + L+PK R KQ +S
Sbjct: 63 DFMQ----RGRVRVQLKRDDGTLVNSAIPSRKTLFLKVAELVPKHHGRSKKQDHS 113
>gi|268564169|ref|XP_002639033.1| Hypothetical protein CBG22282 [Caenorhabditis briggsae]
Length = 160
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 4 IDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE 63
+ ++ ++ +RWV IYPAYI++KKT +GR+I K AV+NPT +I DVL+ G +E
Sbjct: 23 VASEALSNPKRWVVIYPAYIDKKKTSKQGRKISKLLAVENPTSVEIHDVLAAVGFNPLLE 82
Query: 64 -NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
K YPR+ ++ V+GR RVQLKNDDG+P + TR+ V + +IPKLK+RQ
Sbjct: 83 RTKCYPRDGERDFEVQGRVRVQLKNDDGTPKHTQ-KTRDEVFKMVAEMIPKLKTRQ 137
>gi|345324665|ref|XP_003430842.1| PREDICTED: signal recognition particle 19 kDa protein-like isoform
2 [Ornithorhynchus anatinus]
Length = 150
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 72/125 (57%), Gaps = 23/125 (18%)
Query: 5 DTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN 64
D D +R++CIYPAY+N KKT+AEGRRIP K +N
Sbjct: 35 DEMSPADKDRFICIYPAYLNNKKTIAEGRRIPVEK-----------------------KN 71
Query: 65 KLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANS 124
K+Y RE +++ RGR R+QLK DDGS P FP+R++VML+ +IPKLK+R K +
Sbjct: 72 KMYSREWNRDMQYRGRVRIQLKRDDGSLCFPQFPSRKSVMLYAAEMIPKLKTRTQKSGSG 131
Query: 125 EQNQQ 129
+ N Q
Sbjct: 132 DHNYQ 136
>gi|242073286|ref|XP_002446579.1| hypothetical protein SORBIDRAFT_06g018340 [Sorghum bicolor]
gi|241937762|gb|EES10907.1| hypothetical protein SORBIDRAFT_06g018340 [Sorghum bicolor]
Length = 141
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 70/111 (63%), Gaps = 5/111 (4%)
Query: 12 VERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPRE 70
+++W IYP Y+N KKT+AEGRRI AKA +PT +I D S + + IE +K YPR+
Sbjct: 13 IKKWNVIYPVYLNSKKTVAEGRRIAAAKACPDPTCVEIADCCSHLKIPHAIELDKAYPRD 72
Query: 71 ISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQ 121
F GR RVQLK DDGSPVNP T++ +M+ + L+PK R KQ
Sbjct: 73 F----FQVGRVRVQLKKDDGSPVNPAIKTKKQLMIQIAELVPKHHGRTKKQ 119
>gi|402903220|ref|XP_003914474.1| PREDICTED: signal recognition particle 19 kDa protein-like [Papio
anubis]
Length = 129
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 76/118 (64%), Gaps = 2/118 (1%)
Query: 13 ERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREI 71
+R++CIYPAY++ KT+AEGRRIP ++AV+NPT +I DV S GL +E NK+Y RE
Sbjct: 13 DRFICIYPAYLS-SKTIAEGRRIPVSEAVENPTATEIQDVCSEVGLNVFLEKNKMYSREW 71
Query: 72 SKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQ 129
+ + R R RVQLK +DG F + ++VML+ + PKLK R K +Q+ Q
Sbjct: 72 NHDVQYRDRVRVQLKQEDGGLSLVQFLSCKSVMLYAAEITPKLKRRTQKTGGGDQSLQ 129
>gi|255556540|ref|XP_002519304.1| signal recognition particle 19 kD protein, putative [Ricinus
communis]
gi|223541619|gb|EEF43168.1| signal recognition particle 19 kD protein, putative [Ricinus
communis]
Length = 136
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 74/118 (62%), Gaps = 5/118 (4%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
++++WV +YP YIN KKT+A+GRRI KA +NPT +I D S L + IE +K YPR
Sbjct: 8 NIKKWVVLYPVYINSKKTIAQGRRICTTKACENPTCVEIGDCCSHLKLPFAIEIDKAYPR 67
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQN 127
+ + GR RV LK +DG+ NP PTR+ +MLH+ L+P+ R KQ ++ +
Sbjct: 68 DFMQI----GRVRVLLKREDGTLYNPAIPTRKQLMLHVAELVPRHPGRTKKQESASTS 121
>gi|115467942|ref|NP_001057570.1| Os06g0342100 [Oryza sativa Japonica Group]
gi|1711507|sp|P49964.1|SRP19_ORYSJ RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|624221|gb|AAB65810.1| signal recognition particle 19 kDa protein subunit SRP19 [Oryza
sativa Japonica Group]
gi|54290895|dbj|BAD61555.1| signal recognition particle 19 kDa protein subunit SRP19 [Oryza
sativa Japonica Group]
gi|54290948|dbj|BAD61629.1| signal recognition particle 19 kDa protein subunit SRP19 [Oryza
sativa Japonica Group]
gi|113595610|dbj|BAF19484.1| Os06g0342100 [Oryza sativa Japonica Group]
gi|215765513|dbj|BAG87210.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218198120|gb|EEC80547.1| hypothetical protein OsI_22854 [Oryza sativa Indica Group]
Length = 136
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 10 TDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYP 68
+ +++W IYP Y+N KKT+AEGRRI KA +PT +I D S + + IE +K YP
Sbjct: 8 SSIKKWNVIYPVYLNSKKTVAEGRRIASGKACPDPTCVEIADCCSHLKIPHAIELDKAYP 67
Query: 69 REISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQ 121
R+ F GR RVQLK DDGSPVNP T++ +M+ + L+PK R KQ
Sbjct: 68 RDF----FQVGRVRVQLKKDDGSPVNPAIKTKKQLMIQIAELVPKHHGRTKKQ 116
>gi|224133252|ref|XP_002321521.1| predicted protein [Populus trichocarpa]
gi|222868517|gb|EEF05648.1| predicted protein [Populus trichocarpa]
Length = 136
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 71/112 (63%), Gaps = 5/112 (4%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
++++WV +YP YIN KKT+AEGRRI KA +NPT +I D S L + IE +K YPR
Sbjct: 8 NIKKWVVLYPVYINSKKTIAEGRRISVEKACENPTCVEIGDCCSHLKLPFAIEIDKAYPR 67
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQ 121
+ + GR RV LK +DGS NP P+R+ +MLH+ L+P+ R KQ
Sbjct: 68 DFMQV----GRVRVLLKREDGSLSNPAIPSRKQLMLHVAELVPRHPGRTKKQ 115
>gi|358248038|ref|NP_001240053.1| uncharacterized protein LOC100801614 [Glycine max]
gi|255638480|gb|ACU19549.1| unknown [Glycine max]
Length = 137
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 83/140 (59%), Gaps = 5/140 (3%)
Query: 4 IDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE 63
+DT + ++++W+ +YP YIN KKT+AEGRRI AKA +NPT +I D S L + IE
Sbjct: 1 MDTSELPNLKKWIVMYPVYINSKKTMAEGRRIGLAKACENPTCAEIGDCCSYLKLPFAIE 60
Query: 64 -NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQA 122
+K YPR+ + RGR RV LK +DG+ N +R+ +M+ + ++P+ R KQ
Sbjct: 61 IDKAYPRDFMQ----RGRVRVLLKKEDGTLFNSAISSRKQLMVKVAEMVPRHHGRTKKQD 116
Query: 123 NSEQNQQRDLSGGGGGGKKQ 142
+ + + G GGKK+
Sbjct: 117 PASTSTAGPSTKSGKGGKKR 136
>gi|449459788|ref|XP_004147628.1| PREDICTED: signal recognition particle 19 kDa protein-like [Cucumis
sativus]
gi|449530907|ref|XP_004172433.1| PREDICTED: signal recognition particle 19 kDa protein-like [Cucumis
sativus]
Length = 134
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 72/112 (64%), Gaps = 5/112 (4%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
+++RWV +YP YIN KKT+AEGRRI +KA +NPT +I D S L + IE +K YPR
Sbjct: 7 NIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPR 66
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQ 121
+ + RGR RVQLK +DG+ NP +R+ +ML + L+P+ R KQ
Sbjct: 67 DFMQ----RGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVPRHPGRTKKQ 114
>gi|426349648|ref|XP_004042403.1| PREDICTED: signal recognition particle 19 kDa protein [Gorilla
gorilla gorilla]
Length = 120
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 76/130 (58%), Gaps = 23/130 (17%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +K
Sbjct: 1 MACATARSPADQDRFICIYPAYLNNKKTIAEGRRIPISK--------------------- 39
Query: 61 HIENKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK 120
+NK+Y RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R K
Sbjct: 40 --KNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQK 97
Query: 121 QANSEQNQQR 130
++Q+ Q+
Sbjct: 98 TGGADQSLQQ 107
>gi|326428758|gb|EGD74328.1| hypothetical protein PTSG_12433 [Salpingoeca sp. ATCC 50818]
Length = 156
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 73/115 (63%), Gaps = 6/115 (5%)
Query: 6 TKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTG--LKYHIE 63
T T+ ERWV +YPAYI+ +KT+A+GRRIPK KAVD P +DI +S+ L +E
Sbjct: 5 TTDPTNPERWVVVYPAYIDSEKTIAQGRRIPKEKAVDKPDIRDIIRAVSSDDFQLPAKVE 64
Query: 64 NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
NK Y R ++ RGR R QLKN DGS VNP+FP R+A+ +L I + R+
Sbjct: 65 NKAYCR----DYLTRGRLRAQLKNADGSLVNPEFPDRKALYCYLADKIKHSEERK 115
>gi|323510698|ref|NP_001191123.1| signal recognition particle 19 kDa protein isoform 3 [Homo sapiens]
gi|441598666|ref|XP_004087473.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 [Nomascus leucogenys]
Length = 120
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 76/130 (58%), Gaps = 23/130 (17%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +K
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISK--------------------- 39
Query: 61 HIENKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK 120
+NK+Y RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R K
Sbjct: 40 --KNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQK 97
Query: 121 QANSEQNQQR 130
++Q+ Q+
Sbjct: 98 TGGADQSLQQ 107
>gi|388502370|gb|AFK39251.1| unknown [Medicago truncatula]
Length = 138
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 82/135 (60%), Gaps = 7/135 (5%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
+++W+ +YP YIN KKT+AEGRRI +K+ +NPT +I D + L + IE +K YPR
Sbjct: 7 SIKKWIVLYPVYINSKKTVAEGRRIGISKSCENPTCVEIGDCCNFLKLPFAIELDKAYPR 66
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQ--ANSEQN 127
+ + RGR RV LKN+DG+ +NP +R+ +ML + ++PK R KQ A++
Sbjct: 67 DFMQ----RGRVRVLLKNEDGTLINPSIASRKQLMLRVAEMVPKHHGRTKKQETASTTIA 122
Query: 128 QQRDLSGGGGGGKKQ 142
+ G GGKK+
Sbjct: 123 TAGPSNKSGKGGKKR 137
>gi|405955071|gb|EKC22324.1| Signal recognition particle 19 kDa protein [Crassostrea gigas]
Length = 106
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Query: 8 KHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLY 67
KH+D ERW+CIYPAYIN +KT+ EGRR+PK K V+NPTY +I DVL +G IENK+Y
Sbjct: 17 KHSDRERWICIYPAYINSRKTVTEGRRLPKDKCVENPTYNEIKDVLLASGFGIGIENKVY 76
Query: 68 PREIS-KEHFVRGRARVQ 84
PRE+ ++ VRGR RV
Sbjct: 77 PRELDHRDPKVRGRIRVH 94
>gi|255575754|ref|XP_002528776.1| signal recognition particle 19 kD protein, putative [Ricinus
communis]
gi|223531779|gb|EEF33598.1| signal recognition particle 19 kD protein, putative [Ricinus
communis]
Length = 136
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 71/112 (63%), Gaps = 5/112 (4%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
++++WV +YP YIN KKT+A+GRRI +KA +NPT +I D S L + IE +K YPR
Sbjct: 8 NIKKWVVLYPVYINSKKTIAQGRRICTSKACENPTCVEIGDCCSHLKLPFAIEIDKAYPR 67
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQ 121
+ + GR RV LK DG+ NP PTR+ +MLH+ L+P+ R KQ
Sbjct: 68 DFMQI----GRVRVLLKRGDGTLYNPAIPTRKQLMLHVAELVPRHPGRTKKQ 115
>gi|453222677|ref|NP_490855.3| Protein F37F2.2 [Caenorhabditis elegans]
gi|403411187|emb|CCD70777.2| Protein F37F2.2 [Caenorhabditis elegans]
Length = 142
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 79/119 (66%), Gaps = 2/119 (1%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
M ++ ++ + +RW+ IYPAYI++KKT +GR+I + AV+NPT +I DVL+ G
Sbjct: 1 MTSVASEPLSSQKRWIVIYPAYIDKKKTAKQGRKISQILAVENPTSVEIHDVLAAVGFNP 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
+E K YPR+ ++ V+GR RVQLKNDDG+ + + TR+ + + +IPKLK+RQ
Sbjct: 61 LLERTKCYPRDGERDFEVQGRVRVQLKNDDGTAKH-EQKTRDEIFKMVAEMIPKLKTRQ 118
>gi|350580989|ref|XP_003480937.1| PREDICTED: signal recognition particle 19 kDa protein-like [Sus
scrofa]
Length = 120
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 75/130 (57%), Gaps = 23/130 (17%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +K
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISK--------------------- 39
Query: 61 HIENKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK 120
+NK+Y RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R K
Sbjct: 40 --KNKMYSREWNRDLQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQK 97
Query: 121 QANSEQNQQR 130
+Q+ Q+
Sbjct: 98 TGGGDQSLQQ 107
>gi|52783428|sp|O61749.3|SRP19_CAEEL RecName: Full=Probable signal recognition particle 19 kDa protein;
Short=SRP19
Length = 160
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 79/119 (66%), Gaps = 2/119 (1%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
M ++ ++ + +RW+ IYPAYI++KKT +GR+I + AV+NPT +I DVL+ G
Sbjct: 1 MTSVASEPLSSQKRWIVIYPAYIDKKKTAKQGRKISQILAVENPTSVEIHDVLAAVGFNP 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
+E K YPR+ ++ V+GR RVQLKNDDG+ + + TR+ + + +IPKLK+RQ
Sbjct: 61 LLERTKCYPRDGERDFEVQGRVRVQLKNDDGTAKH-EQKTRDEIFKMVAEMIPKLKTRQ 118
>gi|410949072|ref|XP_003981248.1| PREDICTED: signal recognition particle 19 kDa protein isoform 2
[Felis catus]
Length = 120
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 75/130 (57%), Gaps = 23/130 (17%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +K
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISK--------------------- 39
Query: 61 HIENKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK 120
+NK+Y RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R K
Sbjct: 40 --KNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQK 97
Query: 121 QANSEQNQQR 130
+Q+ Q+
Sbjct: 98 TGGGDQSLQQ 107
>gi|255070567|ref|XP_002507365.1| type II secretory pathway family [Micromonas sp. RCC299]
gi|226522640|gb|ACO68623.1| type II secretory pathway family [Micromonas sp. RCC299]
Length = 176
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 69/107 (64%), Gaps = 5/107 (4%)
Query: 13 ERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLS-TTGLKYHIENKLYPREI 71
+R V IYP+YIN + ++AEGRRIPK A D P +I DVL + L +E+K YP
Sbjct: 18 DRRVIIYPSYINSRCSVAEGRRIPKDAACDAPNVLEIRDVLEKSMKLPCEVEDKSYP--- 74
Query: 72 SKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
K+ + RGR RV +K DDG+P+ +FPTR AVML + L+PK RQ
Sbjct: 75 -KDFWQRGRVRVTIKKDDGTPIAREFPTRRAVMLEIARLVPKHPGRQ 120
>gi|444732191|gb|ELW72498.1| Signal recognition particle 19 kDa protein [Tupaia chinensis]
Length = 113
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPADQDRFLCIYPAYLNNKKTNAEGRRIPVSKAVENPTATEIQDVCSVVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPT 99
+E NK+ RE +++ RGR RVQLK DGS FP+
Sbjct: 61 LLEKNKMSSREWNRDVQYRGRVRVQLKQGDGSLCLVQFPS 100
>gi|344265981|ref|XP_003405059.1| PREDICTED: signal recognition particle 19 kDa protein-like isoform
2 [Loxodonta africana]
Length = 120
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 74/130 (56%), Gaps = 23/130 (17%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP K
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPINK--------------------- 39
Query: 61 HIENKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK 120
+NKLY RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R K
Sbjct: 40 --KNKLYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQK 97
Query: 121 QANSEQNQQR 130
+Q+ Q+
Sbjct: 98 TGGGDQSLQQ 107
>gi|148664667|gb|EDK97083.1| signal recognition particle 19, isoform CRA_b [Mus musculus]
Length = 120
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 76/130 (58%), Gaps = 23/130 (17%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +K
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISK--------------------- 39
Query: 61 HIENKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK 120
+NK+Y RE +++ RGR RVQLK +DGS FP+R++VML++ +IPKLK+R K
Sbjct: 40 --KNKMYSREWNRDVQFRGRVRVQLKQEDGSLCLVQFPSRKSVMLYVAEMIPKLKTRTQK 97
Query: 121 QANSEQNQQR 130
++ + Q+
Sbjct: 98 SGGADPSLQQ 107
>gi|326511385|dbj|BAJ87706.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518933|dbj|BAJ92627.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 140
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 10 TDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYP 68
+ +++W IYP Y+N KKT+AEGRRI AKA +PT +I D + + IE +K YP
Sbjct: 13 SSIKKWKIIYPVYLNSKKTVAEGRRIAAAKACPDPTCIEIADSCAHLKIPRAIELDKAYP 72
Query: 69 REISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQ 121
R+ F GR RVQL NDDGSPVNP T++ +M+ + L+PK R KQ
Sbjct: 73 RDF----FQVGRVRVQLTNDDGSPVNPAIRTKKQLMIQIAELVPKHHGRTKKQ 121
>gi|426232425|ref|XP_004010223.1| PREDICTED: signal recognition particle 19 kDa protein isoform 3
[Ovis aries]
Length = 120
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 75/130 (57%), Gaps = 23/130 (17%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +K
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISK--------------------- 39
Query: 61 HIENKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK 120
+NK+Y RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R K
Sbjct: 40 --KNKMYSREWNRDLQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQK 97
Query: 121 QANSEQNQQR 130
+Q+ Q+
Sbjct: 98 TGVGDQSLQQ 107
>gi|338713363|ref|XP_003362886.1| PREDICTED: signal recognition particle 19 kDa protein-like isoform
3 [Equus caballus]
Length = 122
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 75/132 (56%), Gaps = 25/132 (18%)
Query: 1 MATIDTKKHTDVERWV--CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGL 58
MA + + +RWV CIYPAY+N KKT+AEGRRIP +K
Sbjct: 1 MACAAARSPAEQDRWVSFCIYPAYLNNKKTIAEGRRIPISK------------------- 41
Query: 59 KYHIENKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
NK+Y RE +++ RGR RVQLK +DGS FP+R++VML++ +IPKLK+R
Sbjct: 42 ----RNKMYSREWNRDAQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYVAEMIPKLKTRT 97
Query: 119 GKQANSEQNQQR 130
K +Q+ Q+
Sbjct: 98 QKTGGGDQSLQQ 109
>gi|391331315|ref|XP_003740095.1| PREDICTED: signal recognition particle 19 kDa protein-like
[Metaseiulus occidentalis]
Length = 194
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 72/114 (63%), Gaps = 2/114 (1%)
Query: 7 KKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN-K 65
+KH++ ERW+ ++P Y+N+ KT+AEGRR+PK AV++P ++I L G +E K
Sbjct: 21 RKHSEHERWIHVFPIYLNKNKTVAEGRRVPKEVAVEDPITREIVIALQQKGFDLFVEGYK 80
Query: 66 LYPREISKEH-FVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
++PRE+ KE+ +R R RV K+D+G P+N +FP + + + I L RQ
Sbjct: 81 VHPREVDKENVLMRSRVRVHFKDDNGKPINSEFPNKRKLFKMICEFISGLDYRQ 134
>gi|149017171|gb|EDL76222.1| signal recognition particle 19 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 120
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 75/130 (57%), Gaps = 23/130 (17%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP K
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPINK--------------------- 39
Query: 61 HIENKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK 120
+NK+Y RE +++ RGR RVQLK +DGS FP+R++VML++ +IPKLK+R K
Sbjct: 40 --KNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYVAEMIPKLKTRTQK 97
Query: 121 QANSEQNQQR 130
++ + Q+
Sbjct: 98 SGGADPSLQQ 107
>gi|297736791|emb|CBI25992.3| unnamed protein product [Vitis vinifera]
Length = 212
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 70/112 (62%), Gaps = 5/112 (4%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
++++W+ YP YIN KKT+AEGRR+ +KA +NPT +I D S L + IE +K YPR
Sbjct: 84 NIKKWIVFYPVYINSKKTIAEGRRLSTSKACENPTCVEIGDCCSHLKLPFAIEIDKAYPR 143
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQ 121
+ + RGR RV LK +DG+ NP +R+ +M H+ L+P+ R KQ
Sbjct: 144 DFMQ----RGRVRVLLKKEDGTLYNPAISSRKELMRHVAELVPRHPGRVKKQ 191
>gi|355701973|gb|EHH29326.1| hypothetical protein EGK_09721, partial [Macaca mulatta]
Length = 126
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 76/120 (63%), Gaps = 6/120 (5%)
Query: 13 ERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREI 71
+R++CIY AY++ KT+AEGRRIP +KAV+NPT +I DV S GL +E NK+Y RE
Sbjct: 10 DRFICIYAAYLS-NKTIAEGRRIPISKAVENPTATEIQDVCSEVGLNVFLEKNKMYSRE- 67
Query: 72 SKEHFVR--GRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQ 129
+ H V+ R RVQL+ +DG F + ++VML+ + PKLK R K +Q+ Q
Sbjct: 68 -RNHDVQHGDRVRVQLRQEDGGLCLAQFLSCKSVMLYAAEITPKLKRRTQKTGGGDQSLQ 126
>gi|225432142|ref|XP_002265249.1| PREDICTED: signal recognition particle 19 kDa protein [Vitis
vinifera]
Length = 135
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 70/112 (62%), Gaps = 5/112 (4%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
++++W+ YP YIN KKT+AEGRR+ +KA +NPT +I D S L + IE +K YPR
Sbjct: 7 NIKKWIVFYPVYINSKKTIAEGRRLSTSKACENPTCVEIGDCCSHLKLPFAIEIDKAYPR 66
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQ 121
+ + RGR RV LK +DG+ NP +R+ +M H+ L+P+ R KQ
Sbjct: 67 DFMQ----RGRVRVLLKKEDGTLYNPAISSRKELMRHVAELVPRHPGRVKKQ 114
>gi|391336483|ref|XP_003742609.1| PREDICTED: signal recognition particle 19 kDa protein-like
[Metaseiulus occidentalis]
Length = 194
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 73/114 (64%), Gaps = 2/114 (1%)
Query: 7 KKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN-K 65
+KH++ ERW+ ++P Y+N+ KT+AEGRR+PK AV++P ++I L G +E K
Sbjct: 21 RKHSEHERWIHVFPIYLNKNKTVAEGRRVPKEVAVEDPITREIVIALQQKGFDLFVEGYK 80
Query: 66 LYPREISKEH-FVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
++PRE+ KE+ +R R RV ++D+G P++P+FP + + + I + RQ
Sbjct: 81 VHPREVDKENVLMRSRVRVHFRDDNGKPIHPEFPNKRKLFRMICESIGGMDYRQ 134
>gi|449460339|ref|XP_004147903.1| PREDICTED: signal recognition particle 19 kDa protein-like isoform
1 [Cucumis sativus]
gi|449460341|ref|XP_004147904.1| PREDICTED: signal recognition particle 19 kDa protein-like isoform
2 [Cucumis sativus]
Length = 135
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 70/112 (62%), Gaps = 5/112 (4%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
+++RWV +YP YIN KKT+AEGRRI +KA +NPT +I D L + IE +K YPR
Sbjct: 7 NIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPR 66
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQ 121
+ + RGR RV LK +DG+ NP +R+ +ML + L+P+ R KQ
Sbjct: 67 DFMQ----RGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVPRHPGRTKKQ 114
>gi|354480782|ref|XP_003502583.1| PREDICTED: signal recognition particle 19 kDa protein-like
[Cricetulus griseus]
Length = 122
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 69/103 (66%), Gaps = 1/103 (0%)
Query: 29 LAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEHFVRGRARVQLKN 87
L GRRIP +KAV+NPT +I DV S GL +E NK+Y RE +++ RGR RVQL+
Sbjct: 7 LESGRRIPISKAVENPTATEIQDVCSAVGLNAFLEKNKMYSREWNRDVQYRGRVRVQLRQ 66
Query: 88 DDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQR 130
+DGS FP+R++VML++ +IPKLK+R K ++ + Q+
Sbjct: 67 EDGSLCLVQFPSRKSVMLYVAEMIPKLKTRTQKTGGADPSLQQ 109
>gi|294953405|ref|XP_002787747.1| Signal recognition particle 19 kDa protein, putative [Perkinsus
marinus ATCC 50983]
gi|239902771|gb|EER19543.1| Signal recognition particle 19 kDa protein, putative [Perkinsus
marinus ATCC 50983]
Length = 162
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 71/122 (58%), Gaps = 4/122 (3%)
Query: 8 KHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLY 67
K D+ RW +YP Y+N KT+ EGRRI KAK V+NPT ++ + + +E+K Y
Sbjct: 13 KQVDISRWNILYPNYLNAVKTVPEGRRIAKAKCVENPTVVEMGEACRELHIPCVLEDKCY 72
Query: 68 PREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQN 127
PR+ VRGR RV+L +D+G P+ + P + ++ +G +IP LKSR +E+N
Sbjct: 73 PRDW----LVRGRLRVKLSDDNGKPLVSEIPGKRQLLEKMGEVIPTLKSRTHPVKKAEEN 128
Query: 128 QQ 129
Sbjct: 129 HH 130
>gi|355755061|gb|EHH58928.1| hypothetical protein EGM_08898, partial [Macaca fascicularis]
Length = 126
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 74/118 (62%), Gaps = 2/118 (1%)
Query: 13 ERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREI 71
+R++CIY AY++ KT+AEGRRIP +KAV+NPT +I DV S GL +E NK+Y RE
Sbjct: 10 DRFICIYAAYLS-NKTIAEGRRIPISKAVENPTATEIQDVCSEVGLNVFLEKNKMYSRER 68
Query: 72 SKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQ 129
+ + R RVQL+ +DG F + ++V+L+ + PKLK R K +Q+ Q
Sbjct: 69 NHDVQYGDRVRVQLRQEDGGLCLAQFLSCKSVILYAAEITPKLKRRTQKTGGGDQSLQ 126
>gi|297736744|emb|CBI25945.3| unnamed protein product [Vitis vinifera]
Length = 169
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 69/112 (61%), Gaps = 5/112 (4%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
++++W+ YP YIN KKT+AEGRR+ +KA +NPT +I D S L + IE +K YPR
Sbjct: 41 NIKKWIVFYPVYINSKKTIAEGRRLSTSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPR 100
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQ 121
+ + RGR RV LK +DG+ NP + + +M H+ L+P+ R KQ
Sbjct: 101 DFMQ----RGRVRVLLKKEDGTLYNPAISSHKDLMRHVAELVPRHPGRVKKQ 148
>gi|209878438|ref|XP_002140660.1| signal recognition particle 19 protein [Cryptosporidium muris RN66]
gi|209556266|gb|EEA06311.1| signal recognition particle 19 protein, putative [Cryptosporidium
muris RN66]
Length = 146
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 76/138 (55%), Gaps = 4/138 (2%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
M T + TDV RW IYPAYI++ KT+++GR I ++ P ++ ++ G+ Y
Sbjct: 1 MVTPLSSDDTDVSRWKVIYPAYIDKNKTISKGRLISTRHCIECPNVAEMAEICVQLGIPY 60
Query: 61 HIENKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK 120
IE K YPR+ V GR R +L N DG N + T++ +++H+G IPKLKSR +
Sbjct: 61 KIECKRYPRDF----MVLGRLRYKLFNKDGDAFNDEILTKKMLLIHMGQNIPKLKSRLSQ 116
Query: 121 QANSEQNQQRDLSGGGGG 138
+S + +G G G
Sbjct: 117 INSSSSSSSSSSTGKGTG 134
>gi|440798969|gb|ELR20030.1| signal recognition particle 19 kDa protein [Acanthamoeba
castellanii str. Neff]
Length = 133
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
Query: 13 ERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREI 71
++W IYP Y+N KKT A+GR+I K KA +NPT ++I DV G K +E +K +PR+
Sbjct: 7 KKWSVIYPVYVNSKKTAADGRKIAKVKACENPTAQEIYDVCKHLGFKCELEADKAFPRDF 66
Query: 72 SKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
+ +GR RV ++ + S V+PD T+ A+M+ LG LIP+L+SRQ
Sbjct: 67 MQ----KGRVRVLVQENKQS-VHPDIHTKAALMVKLGELIPRLQSRQ 108
>gi|313238721|emb|CBY13744.1| unnamed protein product [Oikopleura dioica]
Length = 190
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 9/112 (8%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREISKE 74
W IYP Y+N+ +T +GRRI K AV+NPT+ +I ++L G K +ENK++PRE +
Sbjct: 47 WPAIYPIYLNKFRTREQGRRIGKENAVENPTFYEIKEILEHEGFKVFVENKVHPREPDRF 106
Query: 75 HFV---------RGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSR 117
+ RGR + Q K +DG+ NP F + + H+ +IPKLKSR
Sbjct: 107 FPLGPPPMGNPHRGRVKFQYKKEDGTLCNPKFENKLKLYTHVAQMIPKLKSR 158
>gi|302855304|ref|XP_002959148.1| hypothetical protein VOLCADRAFT_78252 [Volvox carteri f.
nagariensis]
gi|300255467|gb|EFJ39771.1| hypothetical protein VOLCADRAFT_78252 [Volvox carteri f.
nagariensis]
Length = 155
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 68/115 (59%), Gaps = 7/115 (6%)
Query: 13 ERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREIS 72
+R V +YP Y++ KT+AEGRRIPK A ++P ++ D L+ IE K YPR+
Sbjct: 4 DRRVIVYPQYLDSTKTVAEGRRIPKTLACEDPFTNELYDCCKLLKLESQIEAKHYPRD-- 61
Query: 73 KEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSR---QGKQANS 124
+GR RVQLK +DG P+NP+ P R +M+ L LIPK R +G+Q +
Sbjct: 62 --WLPKGRIRVQLKGEDGKPINPEIPDRRTLMVKLAELIPKHPGRASGKGRQQTT 114
>gi|422293560|gb|EKU20860.1| signal recognition particle subunit SRP19 [Nannochloropsis gaditana
CCMP526]
Length = 172
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 72/110 (65%), Gaps = 6/110 (5%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
D + +V ++P Y++ +KTL +GRRIPK KA NP+ DI D+L L + +E +K YPR
Sbjct: 65 DSKTFVTVWPNYLDAEKTLFQGRRIPKEKACPNPSVHDISDLLVQWELAHIVEQHKRYPR 124
Query: 70 EISKEHFVRGRARVQLKND-DGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
+ GR RV+LK+ G+P++PDFP+R A++L LG IP L SR+
Sbjct: 125 DW----LSYGRVRVELKDPITGAPLHPDFPSRRALLLKLGESIPGLSSRK 170
>gi|357165494|ref|XP_003580402.1| PREDICTED: signal recognition particle 19 kDa protein-like
[Brachypodium distachyon]
Length = 108
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 63/101 (62%), Gaps = 7/101 (6%)
Query: 10 TDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPR 69
+ +++W IYP Y+N KKT+AEGRRI AKA +PT +I D + + IE+K YPR
Sbjct: 10 SSIKKWDIIYPVYLNSKKTVAEGRRIAAAKACADPTCNEILDSCAYLKIPCKIEDKAYPR 69
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGAL 110
+ F RGR RVQLKN+ GSPVNP T + L +G L
Sbjct: 70 DF----FQRGRVRVQLKNEAGSPVNPAIRTSD---LSVGEL 103
>gi|325186366|emb|CCA20872.1| transmembrane protein putative [Albugo laibachii Nc14]
Length = 255
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 72/112 (64%), Gaps = 6/112 (5%)
Query: 8 KHTDVER-WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NK 65
K T ++R ++ IYP YIN K LA GRR PK++A DNP +++ ++ + L + IE +K
Sbjct: 109 KDTPIDRSFITIYPNYINALKALALGRRTPKSQACDNPLVEELSEICAYFNLPHLIETHK 168
Query: 66 LYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSR 117
YPR + V GR RV+L+N NP+ +R+ +M+ +G+LIPKL+SR
Sbjct: 169 RYPR----DWMVLGRVRVRLRNASNEWENPNIQSRKQLMVQMGSLIPKLQSR 216
>gi|299116245|emb|CBN74594.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 203
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 67/111 (60%), Gaps = 5/111 (4%)
Query: 8 KHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN-KL 66
+ DV + + I+P ++ +T+ GRRIPKA +PT +D+ VL L + +E K
Sbjct: 53 RRMDVSKLIVIWPNNVDSTRTIKRGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKA 112
Query: 67 YPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSR 117
YPRE +V GR RV+L ++DG P NP+ P R ++M +G L+P LKSR
Sbjct: 113 YPRE----PWVLGRVRVRLADEDGVPWNPEVPDRPSLMKKMGELMPNLKSR 159
>gi|226489765|emb|CAX75033.1| Signal recognition particle protein 19 [Schistosoma japonicum]
Length = 103
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 9 HTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYP 68
H+ ERW+C+YPAY+N ++T A+GR++ VDNP + ++ +L L Y +E K++P
Sbjct: 15 HSAKERWICVYPAYLNNRRTRAQGRKLSVEHCVDNPKHSEVTMILGKLSLDYLLETKVHP 74
Query: 69 RE-ISKEHFVRGRARVQLKNDDGSPVN 94
+E + E + R RV LKNDDGSPVN
Sbjct: 75 KERDAFEPMNKWRVRVHLKNDDGSPVN 101
>gi|15221088|ref|NP_175250.1| signal recognition particle subunit SRP19 [Arabidopsis thaliana]
gi|21542239|sp|Q943Z6.1|SRP19_ARATH RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|16612311|gb|AAL27515.1|AF439847_1 At1g48160/F21D18_11 [Arabidopsis thaliana]
gi|21593920|gb|AAM65885.1| signal recognition particle 19 kDa protein subunit, putative
[Arabidopsis thaliana]
gi|21928099|gb|AAM78078.1| At1g48160/F21D18_11 [Arabidopsis thaliana]
gi|332194136|gb|AEE32257.1| signal recognition particle subunit SRP19 [Arabidopsis thaliana]
Length = 145
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 66/108 (61%), Gaps = 5/108 (4%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
++++WV IYP YIN KKT+AEGRRI +K+ +NP +I D L +E +K YPR
Sbjct: 7 NIKKWVVIYPVYINSKKTVAEGRRISVSKSCENPNCIEISDCCKHLKLPSAVEIDKAYPR 66
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSR 117
+ + GR RVQLK +DG+ +NP +R+ +M + L+P+ R
Sbjct: 67 DFMQV----GRVRVQLKREDGTLLNPAITSRKHLMQKIAELVPRHPER 110
>gi|159488302|ref|XP_001702153.1| subunit of the signal recognition particle [Chlamydomonas
reinhardtii]
gi|158271338|gb|EDO97159.1| subunit of the signal recognition particle [Chlamydomonas
reinhardtii]
Length = 143
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 4/113 (3%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREISKEH 75
+ IYPAY+ K++A+GRRIPK AV+ P+ +I + GL E K YPR E
Sbjct: 1 IVIYPAYLEMGKSMAKGRRIPKELAVEEPSVFEIAECCKQLGLDALPEGKHYPR----EW 56
Query: 76 FVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQ 128
+GR RV LK +DG+PVNP P R ++ L ++PK R + + N+
Sbjct: 57 LPKGRVRVALKKEDGTPVNPAVPDRRTLLFKLAEMVPKCAGRVNGRPKALANK 109
>gi|297852432|ref|XP_002894097.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339939|gb|EFH70356.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 145
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 65/105 (61%), Gaps = 5/105 (4%)
Query: 10 TDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYP 68
++++WV IYP YIN KKT+AEGRRI +K+ +NP +I D L +E +K YP
Sbjct: 6 VNIKKWVVIYPVYINSKKTVAEGRRISVSKSCENPNCIEISDCCKHLKLPSAVEIDKAYP 65
Query: 69 REISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPK 113
R+ + GR RVQLK +DG+ +NP +R+ ++ + L+P+
Sbjct: 66 RDFMQV----GRVRVQLKREDGTLLNPSITSRKHLLQKIAELVPR 106
>gi|302816286|ref|XP_002989822.1| hypothetical protein SELMODRAFT_160456 [Selaginella moellendorffii]
gi|302820669|ref|XP_002992001.1| hypothetical protein SELMODRAFT_134534 [Selaginella moellendorffii]
gi|300140243|gb|EFJ06969.1| hypothetical protein SELMODRAFT_134534 [Selaginella moellendorffii]
gi|300142388|gb|EFJ09089.1| hypothetical protein SELMODRAFT_160456 [Selaginella moellendorffii]
Length = 140
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 61/104 (58%), Gaps = 5/104 (4%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPRE 70
D+ RWV +YP YIN KKTLAEGRRI A +NPT +I + L E + +
Sbjct: 7 DISRWVIVYPVYINSKKTLAEGRRIAANLACENPTLGEIVESCHLLKLSTAAEPE---KA 63
Query: 71 ISKEHFVRGRARVQL--KNDDGSPVNPDFPTREAVMLHLGALIP 112
S++ RGR RVQL KN +PVNP +R+A+ML + L+P
Sbjct: 64 YSRDFMQRGRVRVQLFQKNAPKTPVNPGITSRKALMLKIAELVP 107
>gi|348681400|gb|EGZ21216.1| hypothetical protein PHYSODRAFT_299044 [Phytophthora sojae]
Length = 271
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 68/110 (61%), Gaps = 5/110 (4%)
Query: 10 TDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYP 68
T + YP YI+ KKT+ +GRRI +A+A + P ++ +V + L + +E K YP
Sbjct: 127 TPTASFFTFYPNYIDNKKTVQQGRRISQAQACEAPLADEMSEVCTYFKLPHVLEPAKKYP 186
Query: 69 REISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
R+ V GR RV+L DDG+P NP+ PTR+ +M+ + LIPKL+SR+
Sbjct: 187 RD----WLVSGRIRVRLVRDDGAPENPEIPTRKVLMVKMAELIPKLQSRK 232
>gi|297796539|ref|XP_002866154.1| hypothetical protein ARALYDRAFT_357880 [Arabidopsis lyrata subsp.
lyrata]
gi|297311989|gb|EFH42413.1| hypothetical protein ARALYDRAFT_357880 [Arabidopsis lyrata subsp.
lyrata]
Length = 145
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 66/109 (60%), Gaps = 5/109 (4%)
Query: 10 TDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYP 68
++++WV IYP YIN KKT+AEGRRI +K+ +NP +I D L +E +K YP
Sbjct: 6 VNIKKWVVIYPVYINSKKTVAEGRRISVSKSCENPNCIEISDCCKHLKLPSAVEIDKAYP 65
Query: 69 REISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSR 117
R+ + GR RVQLK +DG+ +NP +R+ ++ + L+P+ R
Sbjct: 66 RDFMQV----GRVRVQLKREDGTLLNPAITSRKHLLQKIAELVPRHPER 110
>gi|26331876|dbj|BAC29668.1| unnamed protein product [Mus musculus]
gi|148664668|gb|EDK97084.1| signal recognition particle 19, isoform CRA_c [Mus musculus]
Length = 113
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
Query: 38 AKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPD 96
+AV+NPT +I DV S GL +E NK+Y RE +++ RGR RVQLK +DGS
Sbjct: 7 VQAVENPTATEIQDVCSAVGLNAFLEKNKMYSREWNRDVQFRGRVRVQLKQEDGSLCLVQ 66
Query: 97 FPTREAVMLHLGALIPKLKSRQGKQANSEQNQQR 130
FP+R++VML++ +IPKLK+R K ++ + Q+
Sbjct: 67 FPSRKSVMLYVAEMIPKLKTRTQKSGGADPSLQQ 100
>gi|301121576|ref|XP_002908515.1| transmembrane protein, putative [Phytophthora infestans T30-4]
gi|262103546|gb|EEY61598.1| transmembrane protein, putative [Phytophthora infestans T30-4]
Length = 268
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 66/110 (60%), Gaps = 5/110 (4%)
Query: 10 TDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYP 68
T ++ YP YI+ KKT+ +GRRIPK A + P ++ +V + L + +E K YP
Sbjct: 126 TPTSTFMTFYPNYIDDKKTVQQGRRIPKLSACEAPIADEMSEVCTYFKLPHVLEPAKKYP 185
Query: 69 REISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
R+ V GR RV+L DDG+P N D P R+ +M+ + LIPKL+SR+
Sbjct: 186 RD----WLVSGRIRVRLLRDDGTPENADIPNRKTLMIKMAELIPKLQSRK 231
>gi|449516587|ref|XP_004165328.1| PREDICTED: signal recognition particle 19 kDa protein-like [Cucumis
sativus]
Length = 114
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
+++RWV +YP YIN KKT+AEGRRI +KA +NPT +I D L + IE +K YPR
Sbjct: 7 NIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPR 66
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGAL 110
+ + RGR RV LK +DG+ NP + +A G
Sbjct: 67 DFMQ----RGRVRVLLKKEDGTLSNPAITSSKASSCLFGPF 103
>gi|167535434|ref|XP_001749391.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772257|gb|EDQ85912.1| predicted protein [Monosiga brevicollis MX1]
Length = 167
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 70/118 (59%), Gaps = 9/118 (7%)
Query: 6 TKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVL----STTGLKYH 61
TK ++ R+V +YPAYIN + T+ EGRRI K AV+NPT ++I +L + GL
Sbjct: 5 TKDPSNPARFVVLYPAYINARLTVQEGRRIAKELAVENPTPREILTILLKLQAEKGLTIK 64
Query: 62 IE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
E NK Y S+++ GRARVQLKN DGS + PD TR+ + ++ I + R+
Sbjct: 65 FEGNKHY----SRDYLQVGRARVQLKNSDGSAICPDIQTRKQLWCYVAQQIKNIPERK 118
>gi|242018697|ref|XP_002429810.1| Signal recognition particle 19 kDa protein, putative [Pediculus
humanus corporis]
gi|212514828|gb|EEB17072.1| Signal recognition particle 19 kDa protein, putative [Pediculus
humanus corporis]
Length = 91
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 52 VLSTTGLKYHIENKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALI 111
L + G+K +E K Y RE S E F GR RV LKNDDG+PVNP++PTR+++M L LI
Sbjct: 3 ALYSQGIKCELEYKKYSRERSNEPFHTGRVRVHLKNDDGTPVNPNYPTRKSIMYLLADLI 62
Query: 112 PKLKSRQGKQA 122
PKLK+R KQ+
Sbjct: 63 PKLKTRASKQS 73
>gi|8778511|gb|AAF79519.1|AC023673_7 F21D18.11 [Arabidopsis thaliana]
Length = 242
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
++++WV IYP YIN KKT+AEGRRI +K+ +NP +I D L +E +K YPR
Sbjct: 7 NIKKWVVIYPVYINSKKTVAEGRRISVSKSCENPNCIEISDCCKHLKLPSAVEIDKAYPR 66
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNP 95
+ + GR RVQLK +DG+ +NP
Sbjct: 67 DFMQV----GRVRVQLKREDGTLLNP 88
>gi|412993884|emb|CCO14395.1| Signal recognition particle 19 kDa protein [Bathycoccus prasinos]
Length = 226
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 59/98 (60%), Gaps = 5/98 (5%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLST-TGLKYHIENKLYPREISKE 74
+CIY YI+ KT+ +GR++ K D P +I + + L +E+K Y S++
Sbjct: 61 MCIYAPYIDENKTVKQGRKLKKELCCDRPYPFEIKEAIEKGMNLPCDLEDKCY----SRD 116
Query: 75 HFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIP 112
+ RGR RV+ KN+DG+P NP+FPTR ++++ L+P
Sbjct: 117 FWERGRVRVEYKNEDGTPKNPEFPTRRSILIECARLVP 154
>gi|328769775|gb|EGF79818.1| hypothetical protein BATDEDRAFT_25645 [Batrachochytrium
dendrobatidis JAM81]
Length = 214
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 61/104 (58%), Gaps = 5/104 (4%)
Query: 13 ERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKL-YPREI 71
+RW CIYP YI++ K+ AEGRR+ K++AV NP + + + GL +E K +PR
Sbjct: 49 KRWTCIYPVYIDQDKSYAEGRRVSKSQAVKNPAAIYMAEAVQRLGLTSVVEPKCRHPR-- 106
Query: 72 SKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLK 115
+ F GR RVQ+ G P++P + + +++ + +++P K
Sbjct: 107 --DPFTFGRIRVQIHTTAGKPISPIYFNKRQLLIKIASMLPACK 148
>gi|344243516|gb|EGV99619.1| Signal recognition particle 19 kDa protein [Cricetulus griseus]
Length = 110
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 62/98 (63%), Gaps = 5/98 (5%)
Query: 38 AKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPD 96
+KAV+NPT I DV S GL +E NK+Y RE +++ RGR RVQL+ +DGS
Sbjct: 1 SKAVENPTATVIRDVCSAVGLNAFLEKNKMYSREWNRDVQYRGRVRVQLRQEDGSLCLVQ 60
Query: 97 FP----TREAVMLHLGALIPKLKSRQGKQANSEQNQQR 130
FP +R++VML++ +IPKLK+R K ++ + Q+
Sbjct: 61 FPSRYMSRKSVMLYVAEMIPKLKTRTQKTGGADPSLQQ 98
>gi|444726874|gb|ELW67392.1| Signal recognition particle 19 kDa protein [Tupaia chinensis]
Length = 211
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 39/50 (78%)
Query: 14 RWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE 63
R+VCIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL +E
Sbjct: 98 RFVCIYPAYLNNKKTIAEGRRIPVSKAVENPTATEIQDVCSAVGLNVFLE 147
>gi|221504862|gb|EEE30527.1| signal recognition particle 19 kDa protein, putative [Toxoplasma
gondii VEG]
Length = 214
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
Query: 10 TDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN-KLYP 68
D RW +YPAYIN+K+T A GRR+ + AV++P ++ + + IE K YP
Sbjct: 89 VDRSRWQIVYPAYINKKRTAAMGRRVQLSIAVEDPKVDEMKKICDHFNIPAAIEYVKRYP 148
Query: 69 REISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSR 117
R+ H GR R QLK+++ N + P ++ +M + LIP+LKSR
Sbjct: 149 RDWLLSH---GRLRFQLKDENDQLHNQEIPNKKILMRRMCELIPQLKSR 194
>gi|237840003|ref|XP_002369299.1| signal recognition particle 19 kDa protein, putative [Toxoplasma
gondii ME49]
gi|211966963|gb|EEB02159.1| signal recognition particle 19 kDa protein, putative [Toxoplasma
gondii ME49]
gi|221484678|gb|EEE22972.1| signal recognition particle 19 kDa protein, putative [Toxoplasma
gondii GT1]
Length = 222
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
Query: 10 TDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN-KLYP 68
D RW +YPAYIN+K+T A GRR+ + AV++P ++ + + IE K YP
Sbjct: 97 VDRSRWQIVYPAYINKKRTAAMGRRVQLSIAVEDPKVDEMKKICDHFNIPAAIEYVKRYP 156
Query: 69 REISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSR 117
R+ H GR R QLK+++ N + P ++ +M + LIP+LKSR
Sbjct: 157 RDWLLSH---GRLRFQLKDENDQLHNQEIPNKKILMRRMCELIPQLKSR 202
>gi|320163276|gb|EFW40175.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 160
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Query: 6 TKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVL-STTGLKYHIE- 63
T T+V RWV +YP YIN +KTL +GRR+ D+PT +++ V+ + L+ +E
Sbjct: 5 TTDPTNVARWVVVYPIYINSRKTLEQGRRLGVGYCCDSPTAQEVALVVKANLKLECILEW 64
Query: 64 NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSR 117
K YPR+ + RGR RVQL + + P+N P R+ ++ ++ I K+ +R
Sbjct: 65 EKAYPRDFMQ----RGRVRVQLFDANKKPLNSGIPNRQTLLKYIALQINKIPNR 114
>gi|167390796|ref|XP_001739506.1| signal recognition particle 19 kDa protein [Entamoeba dispar
SAW760]
gi|165896779|gb|EDR24106.1| signal recognition particle 19 kDa protein, putative [Entamoeba
dispar SAW760]
Length = 122
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 6 TKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENK 65
T++ D RWV IYPAYI+ + T+A+GR++ K AV P D+ T + + +E +
Sbjct: 3 TQQKVDTSRWVVIYPAYIDGELTIAQGRKVSKEIAVKQPNVFDLKKACETLKVNFALEKQ 62
Query: 66 LYPREISKEHFVRGRARVQLKNDDGSPVNP 95
Y S++ +V GR R+QLK+++G + P
Sbjct: 63 RY----SRQQWVMGRVRIQLKDENGVGITP 88
>gi|148706728|gb|EDL38675.1| mCG1039359 [Mus musculus]
Length = 67
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
Query: 13 ERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKL 66
+R++CIYPAY+N KKT+A+GRRIP +KAV+NPT ++ DV S GL +E NKL
Sbjct: 13 DRFICIYPAYLNNKKTIAKGRRIPISKAVENPTTTEVQDVCSAVGLNAFLEKNKL 67
>gi|281208686|gb|EFA82862.1| signal recognition particle 19 kDa subunit [Polysphondylium
pallidum PN500]
Length = 161
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 4 IDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE 63
++T + ++W IYP YIN + T EGRR K K+V NP ++I GL IE
Sbjct: 19 VNTANIPNFKKWTIIYPHYINSELTKDEGRRTAKDKSVKNPGIEEIARCCGAAGLSAVIE 78
Query: 64 N-KLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALI 111
+ K YP + F RGR RVQ+ ND G+P+ P + +ML + I
Sbjct: 79 STKGYP----SDFFQRGRVRVQMLNDQGAPIIPTIKNKTELMLFIAEKI 123
>gi|67607891|ref|XP_666844.1| SRP19-domain protein [Cryptosporidium hominis TU502]
gi|54657911|gb|EAL36616.1| SRP19-domain protein [Cryptosporidium hominis]
Length = 170
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 10/129 (7%)
Query: 6 TKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENK 65
T+ D +W IYP+Y+N T + GR V++PT +I +V G+ +E+K
Sbjct: 6 TQADQDTSKWKIIYPSYLNSNNTKSSGRLSSLIHCVEDPTVAEIAEVCIQLGIPCKVESK 65
Query: 66 LYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK----- 120
Y R+ GR R QL ++ G N T++ ++ +G +IPKLK+RQ
Sbjct: 66 RYSRDCR----TLGRVRFQLFDESGRAFNDRILTKKILLNQIGIMIPKLKNRQNTTSSVI 121
Query: 121 -QANSEQNQ 128
ANS N+
Sbjct: 122 DNANSRNNK 130
>gi|66475470|ref|XP_627551.1| signal recognition particle SPR19 [Cryptosporidium parvum Iowa II]
gi|46229283|gb|EAK90132.1| signal recognition particle SPR19 [Cryptosporidium parvum Iowa II]
Length = 174
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 10/129 (7%)
Query: 6 TKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENK 65
T+ D +W IYP+Y+N T + GR V++PT +I +V G+ +E+K
Sbjct: 10 TQADQDTSKWKIIYPSYLNSNNTKSSGRLSSLIHCVEDPTIAEIAEVCIQLGIPCKVESK 69
Query: 66 LYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK----- 120
Y SK+ GR R QL ++ G N T++ ++ +G +IPKLK+RQ
Sbjct: 70 RY----SKDCRTLGRVRFQLFDESGRAFNDRILTKKILLNQIGIMIPKLKNRQNTTSSVI 125
Query: 121 -QANSEQNQ 128
ANS N+
Sbjct: 126 DHANSRNNK 134
>gi|401404034|ref|XP_003881632.1| putative signal recognition particle 19 kDa protein [Neospora
caninum Liverpool]
gi|325116045|emb|CBZ51599.1| putative signal recognition particle 19 kDa protein [Neospora
caninum Liverpool]
Length = 237
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 24/129 (18%)
Query: 10 TDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN----- 64
D RW +YPAYIN+K+T A GRR+ + AV++P ++ + + IE
Sbjct: 93 VDRSRWQIVYPAYINKKRTTAMGRRVQLSIAVEDPKVDEMKKICDHLNIPAAIEYADSGF 152
Query: 65 ----------------KLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLG 108
K YPR+ H GR R QL++++ NP+ P ++A+M +
Sbjct: 153 TGLAMLLFSVMVNAQLKKYPRDWLLSH---GRLRFQLRDENDQLHNPEIPHKKALMCRMC 209
Query: 109 ALIPKLKSR 117
LIP+LKSR
Sbjct: 210 ELIPQLKSR 218
>gi|403373161|gb|EJY86495.1| Signal recognition particle, SRP19 subunit [Oxytricha trifallax]
Length = 229
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 64/105 (60%), Gaps = 5/105 (4%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISK 73
W+C+YP Y N K++AEGRR+ KA+AV NP ++ +L +K+ IE +++P++
Sbjct: 83 WICVYPCYFNSNKSVAEGRRVTKARAVPNPQMPELSHILQFVRVKHVIEPQRMHPKDWQH 142
Query: 74 EHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
GR ++ L ++ G+ ++P +++ + + L+P+ K+RQ
Sbjct: 143 P----GRIKICLFDELGNTIHPKITSKKLLFDCICDLLPQHKARQ 183
>gi|300123451|emb|CBK24724.2| unnamed protein product [Blastocystis hominis]
Length = 129
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Query: 18 IYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREISKEHFV 77
+YP+YI+ ++ +GR++ + +NPT +++ GL IE K YP K+ +V
Sbjct: 1 MYPSYIDSSMSVKDGRKVRADLSCENPTVQEVAKACIQLGLDCLIEPKRYP----KKWWV 56
Query: 78 RGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQ 126
GR R+++ N DGSP N +R+ + +G +IP+++ + +Q ++ Q
Sbjct: 57 PGRCRIRIHNADGSPCNKSVNSRKELFHEVGKVIPQIRQQMREQMSASQ 105
>gi|339249309|ref|XP_003373642.1| signal recognition protein [Trichinella spiralis]
gi|316970191|gb|EFV54169.1| signal recognition protein [Trichinella spiralis]
Length = 85
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 21/87 (24%)
Query: 14 RWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREISK 73
RW YP YIN K+TL +GRRIP AKAV+NPT ++I ++L
Sbjct: 12 RWASFYPVYINVKRTLRQGRRIPLAKAVENPTSQEIYEILKNAAFN-------------- 57
Query: 74 EHFVRGRARVQLKNDDGSPVNPDFPTR 100
+++LK+ DG PVNPD P R
Sbjct: 58 -------VKLELKHADGRPVNPDLPNR 77
>gi|407038210|gb|EKE38992.1| SRP19 protein [Entamoeba nuttalli P19]
Length = 122
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 4 IDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE 63
+ T++ D RW+ IYPAYI+ + T+A+GR++ K +V P D+ T + + +E
Sbjct: 1 MTTQQKVDTSRWIVIYPAYIDSELTIAQGRKVSKEVSVKQPNVFDLKKACETLKVNFVLE 60
Query: 64 NKLYPREISKEHFVRGRARVQLKNDDG 90
+ Y S++ +V GR R+QLK+++G
Sbjct: 61 KQRY----SRQQWVMGRVRIQLKDENG 83
>gi|67475490|ref|XP_653439.1| Signal recognition particle 19 kDa protein [Entamoeba histolytica
HM-1:IMSS]
gi|56470385|gb|EAL48051.1| Signal recognition particle 19 kDa protein, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449709941|gb|EMD49106.1| signal recognition particle 19 kDa protein, putative [Entamoeba
histolytica KU27]
Length = 122
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 6 TKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENK 65
T++ D RW+ IYPAYI+ + T+A+GR++ K +V P D+ T + + +E +
Sbjct: 3 TQQKVDTSRWIVIYPAYIDSELTIAQGRKVSKEVSVKQPNVFDLKKACETLKVNFVLEKQ 62
Query: 66 LYPREISKEHFVRGRARVQLKNDDG 90
Y S++ +V GR R+QLK+++G
Sbjct: 63 RY----SRQQWVMGRVRIQLKDENG 83
>gi|303273718|ref|XP_003056212.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
gi|226462296|gb|EEH59588.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
Length = 109
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 64/113 (56%), Gaps = 6/113 (5%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLST-TGLKYHIENKLYPREISKE 74
V IYP Y+N ++A+GR++ ++ D P +I DV+ L IE+K + S++
Sbjct: 1 VIIYPVYLNANASVADGRKLARSACCDAPHVLEIRDVIEKHLKLPCEIEDKHH----SRD 56
Query: 75 HFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ-GKQANSEQ 126
+ RGR RV LK DDG P+ + TR A++ + +IPK +R G A+ E+
Sbjct: 57 TWQRGRVRVTLKKDDGMPLAREISTRGALLTEVARMIPKHPARTPGTSAHKER 109
>gi|154282357|ref|XP_001541974.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150410154|gb|EDN05542.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 261
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
Query: 11 DVERWV-CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI--ENKLY 67
D+ R+ C+YP Y ++ ++ AEGR++ K AV+NP +DI D + GL+ I KL+
Sbjct: 68 DIPRYYQCLYPIYFDKTRSRAEGRKVNKKLAVENPLARDILDAVQVLGLRVGILEPEKLH 127
Query: 68 PREISKEHFVRGRARVQLKNDDGSPVN 94
P++ + GR RVQLK DDG+PV
Sbjct: 128 PKDWANP----GRVRVQLKTDDGTPVT 150
>gi|325090754|gb|EGC44064.1| signal recognition particle SEC65 subunit [Ajellomyces capsulatus
H88]
Length = 261
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
Query: 11 DVERWV-CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI--ENKLY 67
D+ R+ C+YP Y ++ ++ AEGR++ K AV+NP +DI D + GL+ I KL+
Sbjct: 68 DIPRYYQCLYPIYFDKTRSRAEGRKVNKKLAVENPLARDILDAVQVLGLRVGILEPEKLH 127
Query: 68 PREISKEHFVRGRARVQLKNDDGSPVN 94
P++ + GR RVQLK DDG+PV
Sbjct: 128 PKDWANP----GRVRVQLKTDDGTPVT 150
>gi|225561315|gb|EEH09595.1| signal recognition particle SEC65 subunit [Ajellomyces capsulatus
G186AR]
Length = 261
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
Query: 11 DVERWV-CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI--ENKLY 67
D+ R+ C+YP Y ++ ++ AEGR++ K AV+NP +DI D + GL+ I KL+
Sbjct: 68 DIPRYYQCLYPIYFDKTRSRAEGRKVNKKLAVENPLARDILDAVQVLGLRVGILEPEKLH 127
Query: 68 PREISKEHFVRGRARVQLKNDDGSPVN 94
P++ + GR RVQLK DDG+PV
Sbjct: 128 PKDWANP----GRVRVQLKTDDGTPVT 150
>gi|307106786|gb|EFN55031.1| hypothetical protein CHLNCDRAFT_134874 [Chlorella variabilis]
Length = 160
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 13/107 (12%)
Query: 16 VCIYPAYINRKKTLAEGRRIPK---------AKAVDNPTYKDIDDVLSTTGLKYHIENKL 66
V +YP Y++ +KT+A+GRRIPK A + + +++ L+ E K
Sbjct: 9 VIVYPNYLDNRKTVAQGRRIPKELGELPPAAAVPSAPNAIEIYECIINGLKLEAEAEMKS 68
Query: 67 YPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPK 113
YPR+ V GR RV+L+ +DGS NPD PTR A++L + L+P+
Sbjct: 69 YPRD----WMVPGRVRVKLRGEDGSLANPDIPTRRALLLKVAELVPR 111
>gi|261191634|ref|XP_002622225.1| signal recognition particle protein [Ajellomyces dermatitidis
SLH14081]
gi|239589991|gb|EEQ72634.1| signal recognition particle protein [Ajellomyces dermatitidis
SLH14081]
gi|239612600|gb|EEQ89587.1| signal recognition particle protein [Ajellomyces dermatitidis ER-3]
gi|327356895|gb|EGE85752.1| signal recognition particle protein [Ajellomyces dermatitidis ATCC
18188]
Length = 262
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
Query: 11 DVERWV-CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI--ENKLY 67
D+ R+ C+YP Y ++ ++ AEGR++ K AV+NP +DI D + GL+ I KL+
Sbjct: 69 DIPRYYQCLYPVYFDKTRSRAEGRKVSKKLAVENPLARDILDAVQVLGLRVGILEPEKLH 128
Query: 68 PREISKEHFVRGRARVQLKNDDGSPVN 94
P++ + GR RVQLK +DG+PV
Sbjct: 129 PKDWANP----GRVRVQLKTEDGTPVT 151
>gi|384493146|gb|EIE83637.1| hypothetical protein RO3G_08342 [Rhizopus delemar RA 99-880]
Length = 244
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREISKE 74
WVC+YP YI+ K+ EGR+I K K + +P + + GL ENK +PR+
Sbjct: 90 WVCVYPCYIDVDKSAQEGRKIAKQKGIKDPHAYHMALAVQRLGLSVVYENKRHPRDWVN- 148
Query: 75 HFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIP 112
GR RVQLK +D +NP +R+ + + + L+P
Sbjct: 149 ---IGRIRVQLKGNDRFYINPKLTSRKQLFIAIAELMP 183
>gi|67516721|ref|XP_658246.1| hypothetical protein AN0642.2 [Aspergillus nidulans FGSC A4]
gi|40746029|gb|EAA65185.1| hypothetical protein AN0642.2 [Aspergillus nidulans FGSC A4]
Length = 1387
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
C+YP Y ++ +T AEGR++ AV+NP +DI D + GL+ E KL+P++ +
Sbjct: 61 CLYPVYFDKTRTRAEGRKVGTELAVENPLARDIVDAVQMLGLRVGFEPEKLHPKDWANP- 119
Query: 76 FVRGRARVQLKNDDGSPVN 94
GR RVQLK+++G PVN
Sbjct: 120 ---GRVRVQLKDENGEPVN 135
>gi|392558478|gb|EIW51666.1| signal recognition particle SRP19 subunit [Trametes versicolor
FP-101664 SS1]
Length = 309
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 58/108 (53%), Gaps = 7/108 (6%)
Query: 10 TDVERWVCIYPAYINRKKTLAEG-RRIPKAKAVDNPTYKDIDDVLSTTGL-KYHIENKLY 67
T +RW CIYP YI+ K+ G RRIP+AK+V P KDI D + GL H NK +
Sbjct: 83 TPYKRWTCIYPIYIDAKRPCGRGERRIPRAKSVWWPLSKDIADATNRLGLGTLHEVNKAH 142
Query: 68 PREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLK 115
PR+ GR RVQ K DG VNP T++ ++ + I LK
Sbjct: 143 PRDWENP----GRVRVQWKK-DGRFVNPAIKTKKQLLEMIAMQIQMLK 185
>gi|67516723|ref|XP_658247.1| hypothetical protein AN0643.2 [Aspergillus nidulans FGSC A4]
gi|40745992|gb|EAA65148.1| hypothetical protein AN0643.2 [Aspergillus nidulans FGSC A4]
gi|259489090|tpe|CBF89073.1| TPA: signal recognition particle 19 kDa protein, putative
(AFU_orthologue; AFUA_1G16820) [Aspergillus nidulans
FGSC A4]
Length = 257
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISK 73
+ C+YP Y ++ +T AEGR++ AV+NP +DI D + GL+ E KL+P++ +
Sbjct: 59 YQCLYPVYFDKTRTRAEGRKVGTELAVENPLARDIVDAVQMLGLRVGFEPEKLHPKDWAN 118
Query: 74 EHFVRGRARVQLKNDDGSPVN 94
GR RVQLK+++G PVN
Sbjct: 119 P----GRVRVQLKDENGEPVN 135
>gi|226295071|gb|EEH50491.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 267
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 56/85 (65%), Gaps = 6/85 (7%)
Query: 11 DVER-WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYP 68
DV R + C+YP Y ++ ++ AEGR++ K+ AV+NP +DI D + GL+ +E +KL+P
Sbjct: 74 DVPRNYQCLYPVYFDKTRSRAEGRKVNKSLAVENPLARDIMDAVQVLGLQVGLEPDKLHP 133
Query: 69 REISKEHFVRGRARVQLKNDDGSPV 93
++ + GR RV LK +DG+P+
Sbjct: 134 KDWANP----GRVRVLLKMEDGTPL 154
>gi|295656844|ref|XP_002789004.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285437|gb|EEH41003.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 267
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 56/85 (65%), Gaps = 6/85 (7%)
Query: 11 DVER-WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYP 68
DV R + C+YP Y ++ ++ AEGR++ K+ AV+NP +DI D + GL+ +E +KL+P
Sbjct: 74 DVPRNYQCLYPVYFDKTRSRAEGRKVNKSLAVENPLARDIVDAVQVLGLQVGLEPDKLHP 133
Query: 69 REISKEHFVRGRARVQLKNDDGSPV 93
++ + GR RV LK +DG+P+
Sbjct: 134 KDWANP----GRVRVLLKMEDGTPL 154
>gi|225677762|gb|EEH16046.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 267
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 56/85 (65%), Gaps = 6/85 (7%)
Query: 11 DVER-WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYP 68
DV R + C+YP Y ++ ++ AEGR++ K+ AV+NP +DI D + GL+ +E +KL+P
Sbjct: 74 DVPRNYQCLYPVYFDKTRSRAEGRKVNKSLAVENPLARDIVDAVQVLGLQVGLEPDKLHP 133
Query: 69 REISKEHFVRGRARVQLKNDDGSPV 93
++ + GR RV LK +DG+P+
Sbjct: 134 KDWANP----GRVRVLLKMEDGTPL 154
>gi|145341252|ref|XP_001415727.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575950|gb|ABO94019.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 105
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLS-TTGLKYHIENKLYPREISKE 74
V +YP YI+ +++A+GRRI + AV++P ++ D G++ +E+K Y S++
Sbjct: 1 VVVYPPYIDAARSVAKGRRIAREDAVEHPHALEVADACERALGMRCELEDKAY----SRD 56
Query: 75 HFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALI 111
+ RGR RV+ K DDGS V + TR ++ + A +
Sbjct: 57 FWCRGRVRVEWKRDDGSFVREELNTRGKLLRAIAAAV 93
>gi|357120603|ref|XP_003562015.1| PREDICTED: uncharacterized protein LOC100838659 [Brachypodium
distachyon]
Length = 215
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 10/84 (11%)
Query: 18 IYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREISKEHFV 77
IYP Y+N KKT+ E A +PT +I D + + IE+K YPR+ F
Sbjct: 133 IYPVYLNSKKTVVEA----AANGCADPTCNEILDSCAYLKIPCKIEDKAYPRDF----FQ 184
Query: 78 RGRARV--QLKNDDGSPVNPDFPT 99
RGR RV QLKN+DGSPVNP T
Sbjct: 185 RGRVRVRVQLKNEDGSPVNPAIRT 208
>gi|222635525|gb|EEE65657.1| hypothetical protein OsJ_21245 [Oryza sativa Japonica Group]
Length = 101
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 38/112 (33%)
Query: 10 TDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPR 69
+ +++W IYP Y+N KKTL +K YPR
Sbjct: 8 SSIKKWNVIYPVYLNSKKTL----------------------------------DKAYPR 33
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQ 121
+ F GR RVQLK DDGSPVNP T++ +M+ + L+PK R KQ
Sbjct: 34 DF----FQVGRVRVQLKKDDGSPVNPAIKTKKQLMIQIAELVPKHHGRTKKQ 81
>gi|358255669|dbj|GAA57352.1| signal recognition particle subunit SRP19 [Clonorchis sinensis]
Length = 83
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 9 HTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKL 66
H+ ERW+CIYP YIN ++T A GR+I + K VDNP + ++ VL L++ +E K+
Sbjct: 15 HSAKERWICIYPCYINSRRTRARGRKISEEKGVDNPKHSEVTFVLGKLSLEHALETKV 72
>gi|145541690|ref|XP_001456533.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424345|emb|CAK89136.1| unnamed protein product [Paramecium tetraurelia]
Length = 147
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKL-YPREISK 73
W IYP YI+ T A+GRR+ K V P +I LS+ GL++ I+ +PR+I
Sbjct: 14 WKTIYPPYIDSTLTAAQGRRLGKINCVPYPQLMEISQCLSSLGLRHVIDQHAGFPRDI-- 71
Query: 74 EHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
F +GR +V+L +D P NP + ++ + LI + +R+
Sbjct: 72 --FKQGRIKVRLYAEDKKPYNPQVKCKHTLLQSIAKLIKSIPNRK 114
>gi|296803472|ref|XP_002842589.1| signal recognition particle SEC65 subunit [Arthroderma otae CBS
113480]
gi|238838908|gb|EEQ28570.1| signal recognition particle SEC65 subunit [Arthroderma otae CBS
113480]
Length = 272
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 11 DVER-WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYP 68
D+ R + C+YP Y ++ +T AEGRR+ + AVD+P KDI D GL E +KL+P
Sbjct: 77 DIPRSYQCLYPVYFDKSRTRAEGRRVSRKLAVDSPLAKDILDATQLLGLTVGFEPDKLHP 136
Query: 69 REISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLG 108
++ S GR RV LK++D P + + + H+
Sbjct: 137 KDWSNP----GRVRVMLKDEDRRPASSSIKNKHLLYTHVA 172
>gi|255957119|ref|XP_002569312.1| Pc21g23450 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591023|emb|CAP97242.1| Pc21g23450 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 295
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISK 73
+ C+YP Y ++ ++ AEGR++ AV+NP +DI D + GL +E KL+P++ +
Sbjct: 72 FSCLYPVYFDKSRSRAEGRKVGAELAVENPLARDIVDAVQMLGLNAGLEPEKLHPKDWAN 131
Query: 74 EHFVRGRARVQLKNDDGSPVNP 95
GR RVQ+KN+DG NP
Sbjct: 132 P----GRVRVQVKNEDGQLANP 149
>gi|145230235|ref|XP_001389426.1| signal recognition particle protein [Aspergillus niger CBS 513.88]
gi|134055543|emb|CAK37189.1| unnamed protein product [Aspergillus niger]
Length = 267
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 14 RWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREIS 72
R+ C+YP Y ++ +T AEGR++ AV+NP +DI D + GL E KL+P++ +
Sbjct: 60 RYQCLYPIYFDKSRTRAEGRKVGGELAVENPLARDIVDAVQMLGLNVGFEPEKLHPKDWA 119
Query: 73 KEHFVRGRARVQLKNDDGSPVN 94
GR RV LKN+DG VN
Sbjct: 120 NP----GRVRVLLKNEDGKLVN 137
>gi|145536101|ref|XP_001453778.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421511|emb|CAK86381.1| unnamed protein product [Paramecium tetraurelia]
Length = 147
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 7/118 (5%)
Query: 4 IDTKKHTDVER--WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYH 61
+ T + VE W IYP YI+ T A+GRR+ K+ V P +I LS+ GL++
Sbjct: 1 MQTPEQIKVESKTWKTIYPPYIDSTLTTAQGRRLGKSNCVPYPQLMEISQCLSSLGLRHV 60
Query: 62 IENKL-YPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
I+ +P++I F +GR +V+L +D P NP + ++ + LI + +R+
Sbjct: 61 IDQHAGFPKDI----FKQGRIKVRLYAEDKKPYNPQIKCKHTLLQTIAKLIKSIPNRK 114
>gi|327293501|ref|XP_003231447.1| signal recognition particle protein [Trichophyton rubrum CBS
118892]
gi|326466563|gb|EGD92016.1| signal recognition particle protein [Trichophyton rubrum CBS
118892]
Length = 290
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 11 DVER-WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYP 68
D+ R + C+Y Y ++ +T AEGRR+ + AV++P KDI D GL E +KL+P
Sbjct: 86 DIPRSYQCLYAVYFDKSRTRAEGRRVSRKLAVESPLAKDILDATQLLGLSVGFEPDKLHP 145
Query: 69 REISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALI 111
++ S GR RV LK++DG P + + + H+ +
Sbjct: 146 KDWSNP----GRVRVMLKDEDGRPAHSSIKNKHHLYTHVAQYL 184
>gi|121700647|ref|XP_001268588.1| signal recognition particle, putative [Aspergillus clavatus NRRL 1]
gi|119396731|gb|EAW07162.1| signal recognition particle, putative [Aspergillus clavatus NRRL 1]
Length = 259
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 10/100 (10%)
Query: 2 ATIDTKKHTDVERWV-----CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTT 56
++I T+ + R + C+YP Y ++ ++ AEGR++ A++NP +DI D + +
Sbjct: 39 SSIPTRPAPEPRREIPKHFQCLYPVYFDKTRSRAEGRKVGAELAIENPLARDIVDAVQSL 98
Query: 57 GLKYHIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNP 95
GL E KL+P++ + GR RV LK++DG+ VNP
Sbjct: 99 GLNVGFEPEKLHPKDWANP----GRVRVMLKDEDGNLVNP 134
>gi|359477421|ref|XP_003631975.1| PREDICTED: signal recognition particle 19 kDa protein-like [Vitis
vinifera]
Length = 62
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENK 65
++++W+ YP YIN KKT+AEGRR+ +KA +NPT +I D S L + IE K
Sbjct: 7 NIKKWIVFYPVYINSKKTIAEGRRLSTSKACENPTCAEIGDCCSHLKLPFAIEEK 61
>gi|428169179|gb|EKX38115.1| hypothetical protein GUITHDRAFT_40062, partial [Guillardia theta
CCMP2712]
Length = 105
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI--ENKLYPREISK 73
V IY YIN+ KT+ EGRRI A ++PT +I +V + + ENK YPR+
Sbjct: 6 VVIYSPYINKSKTVQEGRRISLKDACEDPTAWEILEVCKRLFPEDCVQGENKGYPRDYEA 65
Query: 74 EH-FVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPK 113
+ +RGR RV+L DG P NP+ TR+ + + LIPK
Sbjct: 66 QWPPMRGRIRVRL-FKDGKPTNPEITTRKQLYKKVAELIPK 105
>gi|303323884|ref|XP_003071931.1| SRP19 protein [Coccidioides posadasii C735 delta SOWgp]
gi|240111638|gb|EER29786.1| SRP19 protein [Coccidioides posadasii C735 delta SOWgp]
Length = 224
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 11 DVER-WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYP 68
D+ R + C+YP Y ++ ++ EGR++ + AV NP +DI D + GL+ E +K++P
Sbjct: 38 DIPRHYQCVYPVYFDKARSRVEGRKVSRKLAVANPLARDILDAVQLLGLEAGFEPDKIHP 97
Query: 69 REISKEHFVRGRARVQLKNDDGSPVN 94
++ + GR RV LK +DG PVN
Sbjct: 98 KDWANP----GRVRVHLKREDGQPVN 119
>gi|119185855|ref|XP_001243534.1| hypothetical protein CIMG_02975 [Coccidioides immitis RS]
gi|392870239|gb|EAS32034.2| signal recognition particle protein [Coccidioides immitis RS]
Length = 240
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 11 DVER-WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYP 68
D+ R + C+YP Y ++ ++ EGR++ + AV NP +DI D + GL+ E +K++P
Sbjct: 54 DIPRHYQCVYPVYFDKARSRVEGRKVSRKLAVANPLARDILDAVQLLGLEAGFEPDKIHP 113
Query: 69 REISKEHFVRGRARVQLKNDDGSPVN 94
++ + GR RV LK +DG PVN
Sbjct: 114 KDWANP----GRVRVHLKREDGQPVN 135
>gi|320032140|gb|EFW14095.1| signal recognition particle SEC65 subunit [Coccidioides posadasii
str. Silveira]
Length = 240
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 11 DVER-WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYP 68
D+ R + C+YP Y ++ ++ EGR++ + AV NP +DI D + GL+ E +K++P
Sbjct: 54 DIPRHYQCVYPVYFDKARSRVEGRKVSRKLAVANPLARDILDAVQLLGLEAGFEPDKIHP 113
Query: 69 REISKEHFVRGRARVQLKNDDGSPVN 94
++ + GR RV LK +DG PVN
Sbjct: 114 KDWANP----GRVRVHLKREDGQPVN 135
>gi|302499396|ref|XP_003011694.1| hypothetical protein ARB_02248 [Arthroderma benhamiae CBS 112371]
gi|291175246|gb|EFE31054.1| hypothetical protein ARB_02248 [Arthroderma benhamiae CBS 112371]
Length = 290
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 11 DVER-WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYP 68
D+ R + C+Y Y ++ +T AEGRR+ + AV++P KDI D GL E +KL+P
Sbjct: 86 DIPRSYQCLYAVYFDKSRTRAEGRRVSRKLAVESPLAKDILDATQLLGLSVGFEPDKLHP 145
Query: 69 REISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALI 111
++ S GR RV LK+++G P + + + H+ +
Sbjct: 146 KDWSNP----GRVRVMLKDEEGRPAHSSIKNKHHLYTHVAQYL 184
>gi|115397399|ref|XP_001214291.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192482|gb|EAU34182.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 256
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISK 73
+ C+YP Y ++ ++ AEGR++ AV+NP +DI D GL E KL+P++ +
Sbjct: 57 YQCLYPVYFDKSRSRAEGRKVGAELAVENPLARDILDATQMLGLTAGFEPEKLHPKDWAN 116
Query: 74 EHFVRGRARVQLKNDDGSPVNP 95
GR RV LKN++G VNP
Sbjct: 117 P----GRVRVMLKNENGQSVNP 134
>gi|119569383|gb|EAW48998.1| hCG2039564, isoform CRA_b [Homo sapiens]
Length = 78
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%)
Query: 66 LYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSE 125
+Y RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R K ++
Sbjct: 1 MYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQKTGGAD 60
Query: 126 QNQQR 130
Q+ Q+
Sbjct: 61 QSLQQ 65
>gi|326483023|gb|EGE07033.1| signal recognition particle SEC65 subunit [Trichophyton equinum CBS
127.97]
Length = 281
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 11 DVER-WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYP 68
D+ R + C+Y Y ++ +T EGRR+ + AV++P KDI D GL E +KL+P
Sbjct: 86 DIPRSYQCLYAVYFDKSRTRVEGRRVSRKLAVESPLAKDILDATQLLGLSVGFEPDKLHP 145
Query: 69 REISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLG 108
++ S GR RV LK++DG P + + + H+
Sbjct: 146 KDWSNP----GRVRVMLKDEDGRPAHSSIKNKHHLYTHIA 181
>gi|452822470|gb|EME29489.1| signal recognition particle subunit SRP19 isoform 1 [Galdieria
sulphuraria]
Length = 143
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Query: 12 VERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPRE 70
+RW+CIYP YI+ +L +GR+I K D P+ ++I G + +E +K +PR
Sbjct: 16 AKRWICIYPVYIDASCSLFQGRKISKHLCSDTPSAEEIAKSCEQLGFETLLESDKKHPR- 74
Query: 71 ISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQAN 123
++F +GR RV L N+ + TR+ ++ + I + + + G + N
Sbjct: 75 ---DNFRKGRIRVHLFNEQHKSLVSVIETRKQLLTKVSQCILEQRLKHGYKGN 124
>gi|315043770|ref|XP_003171261.1| signal recognition particle SEC65 subunit [Arthroderma gypseum CBS
118893]
gi|311345050|gb|EFR04253.1| signal recognition particle SEC65 subunit [Arthroderma gypseum CBS
118893]
Length = 290
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 11 DVER-WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYP 68
D+ R + C+Y Y ++ +T AEGRR+ + AV++P KDI D GL E +KL+P
Sbjct: 86 DIPRSYQCLYAVYFDKSRTRAEGRRVSRKLAVESPLAKDILDATQLLGLNVGFEPDKLHP 145
Query: 69 REISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLG 108
++ S GR RV LK+++G P + + + H+
Sbjct: 146 KDWSNP----GRVRVMLKDEEGRPAHSSIKNKHHLYTHVA 181
>gi|326475874|gb|EGD99883.1| signal recognition particle protein [Trichophyton tonsurans CBS
112818]
Length = 290
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 11 DVER-WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYP 68
D+ R + C+Y Y ++ +T EGRR+ + AV++P KDI D GL E +KL+P
Sbjct: 86 DIPRSYQCLYAVYFDKSRTRVEGRRVSRKLAVESPLAKDILDATQLLGLSVGFEPDKLHP 145
Query: 69 REISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLG 108
++ S GR RV LK++DG P + + + H+
Sbjct: 146 KDWSNP----GRVRVMLKDEDGRPAHSSIKNKHHLYTHIA 181
>gi|302652362|ref|XP_003018033.1| hypothetical protein TRV_07957 [Trichophyton verrucosum HKI 0517]
gi|291181634|gb|EFE37388.1| hypothetical protein TRV_07957 [Trichophyton verrucosum HKI 0517]
Length = 290
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 11 DVER-WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYP 68
D+ R + C+Y Y ++ +T AEGRR+ + AV++P KDI D GL E +KL+P
Sbjct: 86 DIPRSYQCLYAVYFDKSRTRAEGRRVSRKLAVESPLAKDILDATQLLGLSVGFEPDKLHP 145
Query: 69 REISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALI 111
++ S GR RV LK+++G P + + + H+ +
Sbjct: 146 KDWSNP----GRVRVMLKDEEGRPAHSSIKNKHHLYTHVAQYL 184
>gi|195093509|ref|XP_001997729.1| GH23602 [Drosophila grimshawi]
gi|193891580|gb|EDV90446.1| GH23602 [Drosophila grimshawi]
Length = 102
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%)
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK 120
E+ +E RGR RVQL+N DG+ + +FPTRE++M H+ + IP+LK+RQ K
Sbjct: 19 EVERELQFRGRVRVQLRNADGTLCSSEFPTRESIMQHVASKIPQLKTRQNK 69
>gi|440300806|gb|ELP93253.1| signal recognition particle 19 kDa protein, putative [Entamoeba
invadens IP1]
Length = 123
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPRE 70
+ +RWV IYPAY++ + ++GR+I K ++ +P+ D+ L + +E + YPR
Sbjct: 6 ETKRWVVIYPAYMDSELKTSQGRKISKEDSIKSPSIFDLKKGCELLNLHFALERQKYPR- 64
Query: 71 ISKEHFVRGRARVQLKNDDGSPVN 94
+ +V GR RV+LK++ P +
Sbjct: 65 ---QQWVMGRVRVELKDESNQPTS 85
>gi|238483859|ref|XP_002373168.1| signal recognition particle 19 kDa protein, putative [Aspergillus
flavus NRRL3357]
gi|317140126|ref|XP_003189240.1| signal recognition particle protein [Aspergillus oryzae RIB40]
gi|220701218|gb|EED57556.1| signal recognition particle 19 kDa protein, putative [Aspergillus
flavus NRRL3357]
Length = 265
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISK 73
+ C+YP Y ++ +T AEGR++ AV+NP +DI D GL+ E KL+P++ +
Sbjct: 63 YQCLYPVYFDKSRTRAEGRKVGAELAVENPLARDIVDAAQMLGLQVGFEPEKLHPKDWAN 122
Query: 74 EHFVRGRARVQLKNDDGSPVNPDF 97
GR RV LK++DG NP
Sbjct: 123 P----GRVRVLLKDEDGKLANPQI 142
>gi|402219306|gb|EJT99380.1| signal recognition particle SRP19 subunit [Dacryopinax sp. DJM-731
SS1]
Length = 272
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 15 WVCIYPAYINRKKTLAEG-RRIPKAKAVDNPTYKDIDDVLSTTGLK-YHIENKLYPREIS 72
W +YP YI+ K+ L + RRIP+AK+V P D+ + + G H + K +P++
Sbjct: 91 WTTLYPIYIDAKRPLHKNERRIPRAKSVWWPLSSDMGEACARLGFNTLHDQGKRHPKDWE 150
Query: 73 KEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALI 111
GR +VQ K D G VNP PT++ ++LH+ A +
Sbjct: 151 NP----GRVKVQFKKD-GRLVNPSIPTKKKLLLHVAAYV 184
>gi|74183264|dbj|BAE22558.1| unnamed protein product [Mus musculus]
Length = 78
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%)
Query: 66 LYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSE 125
+Y RE +++ RGR RVQLK +DGS FP+R++VML++ +IPKLK+R K ++
Sbjct: 1 MYSREWNRDVQFRGRVRVQLKQEDGSLCLVQFPSRKSVMLYVAEMIPKLKTRTQKSGGAD 60
Query: 126 QNQQR 130
+ Q+
Sbjct: 61 PSHQQ 65
>gi|358365448|dbj|GAA82070.1| signal recognition particle 19 kDa protein, partial [Aspergillus
kawachii IFO 4308]
Length = 148
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISK 73
+ C+YP Y ++ ++ AEGR++ AV+NP +DI D + GL E KL+P++ +
Sbjct: 61 YQCLYPIYFDKSRSRAEGRKVGSELAVENPLARDIVDAVQMLGLNVGFEPEKLHPKDWAN 120
Query: 74 EHFVRGRARVQLKNDDGSPVN 94
GR RV LKN+DG VN
Sbjct: 121 P----GRVRVLLKNEDGKLVN 137
>gi|350638476|gb|EHA26832.1| hypothetical protein ASPNIDRAFT_170225 [Aspergillus niger ATCC
1015]
Length = 1372
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
C+YP Y ++ +T AEGR++ AV+NP +DI D + GL E KL+P++ +
Sbjct: 63 CLYPIYFDKSRTRAEGRKVGSELAVENPLARDIVDAVQMLGLNVGFEPEKLHPKDWANP- 121
Query: 76 FVRGRARVQLKNDDGSPVN 94
GR RV LK++DG VN
Sbjct: 122 ---GRVRVLLKDEDGKLVN 137
>gi|425780832|gb|EKV18828.1| Signal recognition particle 19 kDa protein, putative [Penicillium
digitatum PHI26]
gi|425783069|gb|EKV20938.1| Signal recognition particle 19 kDa protein, putative [Penicillium
digitatum Pd1]
Length = 284
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISK 73
+ C+YP Y ++ ++ AEGR++ AV+NP +DI D + GL +E KL+P++ +
Sbjct: 64 FSCLYPVYFDKTRSRAEGRKVGAELAVENPLARDIVDAVQMLGLNAGLEPEKLHPKDWAN 123
Query: 74 EHFVRGRARVQLKNDDGSPVNPDF 97
GR RVQ+K ++G NP+
Sbjct: 124 P----GRVRVQVKKENGQLANPNI 143
>gi|66820220|ref|XP_643744.1| signal recognition particle 19 kDa subunit [Dictyostelium
discoideum AX4]
gi|74857460|sp|Q554G7.1|SRP19_DICDI RecName: Full=Signal recognition particle 19 kDa protein homolog
gi|60471932|gb|EAL69886.1| signal recognition particle 19 kDa subunit [Dictyostelium
discoideum AX4]
Length = 178
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 4 IDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE 63
+D ++W +YP +IN + T +GR++ K V NPT +I + + GL IE
Sbjct: 9 VDVSTIPGFKKWYIVYPNHINSELTKEKGRKVSKEHGVKNPTLPEIAEATAQLGLPCIIE 68
Query: 64 -NKLYPREISKEHFVRGRARVQLKNDDGS-PVNPDFPTREAVMLHLGALI 111
+K YP KE F+RGR R+ D + P NP P + +++ + I
Sbjct: 69 TSKGYP----KEFFLRGRLRINFFCDGTTMPRNPHIPNKTVLLVKIAERI 114
>gi|242778746|ref|XP_002479301.1| signal recognition particle 19 kDa protein, putative [Talaromyces
stipitatus ATCC 10500]
gi|218722920|gb|EED22338.1| signal recognition particle 19 kDa protein, putative [Talaromyces
stipitatus ATCC 10500]
Length = 265
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
C+Y Y ++ +T EGR++ AV+NP +DI D GL+ E KL+P++ +
Sbjct: 65 CLYAVYFDKTRTRTEGRQVSSKVAVENPLARDILDACQQLGLRVGFEPEKLHPKDWANP- 123
Query: 76 FVRGRARVQLKNDDGSPVNP 95
GR RVQLK++DG+ +NP
Sbjct: 124 ---GRVRVQLKDEDGNLLNP 140
>gi|449543704|gb|EMD34679.1| hypothetical protein CERSUDRAFT_116869 [Ceriporiopsis subvermispora
B]
Length = 312
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 10 TDVERWVCIYPAYINRKKTLAEG-RRIPKAKAVDNPTYKDIDDVLSTTGL-KYHIENKLY 67
T ++W C+YP Y++ K+ G RR+P+ ++V P KD+ D GL H NK +
Sbjct: 80 TPYKKWTCVYPIYLDAKRPYGRGERRVPRQRSVWWPLSKDVADAAVRLGLGALHEVNKAH 139
Query: 68 PREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALI 111
PR+ GR R+Q K DG+P+NP T++ ++ L I
Sbjct: 140 PRDWENP----GRVRIQWKK-DGNPMNPAIRTKKQLIEMLALQI 178
>gi|71032097|ref|XP_765690.1| signal recognition particle [Theileria parva strain Muguga]
gi|68352647|gb|EAN33407.1| signal recognition particle, putative [Theileria parva]
Length = 129
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 9 HTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN-KLY 67
D W IYP Y+++ T ++GR+I + AV PT ++I V + + +E K Y
Sbjct: 5 EVDSSNWNIIYPTYLDKDCTSSQGRKINLSVAVSKPTIEEIKIVCEKLNIPHVVEEKKRY 64
Query: 68 PREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
PR V GR RV L++ S N T++ VM + LI +LK+RQ
Sbjct: 65 PR----NWMVPGRVRVCLRD---SETNEKTRTKKQVMCEIATLISQLKTRQ 108
>gi|290987527|ref|XP_002676474.1| predicted protein [Naegleria gruberi]
gi|284090076|gb|EFC43730.1| predicted protein [Naegleria gruberi]
Length = 76
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
+V R IYP YI++ KTL++GR+I K K V+NP +I D+ + Y +E K YP+
Sbjct: 1 EVNRMQIIYPVYIDKNKTLSQGRKIAKEKCVENPKATEIADICQHLKIPYELEKTKRYPQ 60
Query: 70 EISKEHFVRGRARVQLKNDD 89
E F GR RV LK +
Sbjct: 61 ----EPFEFGRVRVLLKKES 76
>gi|340500915|gb|EGR27749.1| signal recognition particle 19 kda protein, putative
[Ichthyophthirius multifiliis]
Length = 138
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISK 73
W IYP Y++ + EGRRI K + V N K+I + L + +E +K YPR
Sbjct: 14 WKTIYPQYLDSLFSRQEGRRISKDQGVPNINIKEIAEALQKIRVPTVVEVHKSYPRSFQ- 72
Query: 74 EHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
++GR +V LK++D VNP F +++ + L + I + RQ
Sbjct: 73 ---IKGRVKVMLKDEDKKLVNPIFKSKKQLYLRICQEIKQTSERQ 114
>gi|399216542|emb|CCF73229.1| unnamed protein product [Babesia microti strain RI]
Length = 139
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
D W +YP YI++ K+ + GR++ VDNPT +I V LK IE K +P
Sbjct: 5 DTCSWNIVYPCYIDKSKSCSGGRKVAAQYTVDNPTVDEIKLVCDRLELKCLIEREKSHP- 63
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSE 125
K+ +GR RV L ++ + N T+ ++ +G++IP LKSRQ + S+
Sbjct: 64 ---KDWPPKGRVRVYLPSNTNT-SNSQVITKLQLLRKVGSMIPMLKSRQELPSTSK 115
>gi|330792370|ref|XP_003284262.1| hypothetical protein DICPUDRAFT_27302 [Dictyostelium purpureum]
gi|325085835|gb|EGC39235.1| hypothetical protein DICPUDRAFT_27302 [Dictyostelium purpureum]
Length = 185
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 4 IDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE 63
+D + ++WV IYP YIN + T GR+I K AV NP +I + S G IE
Sbjct: 23 VDITRIPGFKQWVIIYPPYINSECTKDRGRKISKENAVKNPNLIEIAEATSAIGFSSVIE 82
Query: 64 -NKLYPREISKEHFVRGRARVQLK 86
NK YP KE F RGR R+ +
Sbjct: 83 PNKGYP----KEFFQRGRVRINFE 102
>gi|119494357|ref|XP_001264074.1| signal recognition particle 19 kDa protein homolog [Neosartorya
fischeri NRRL 181]
gi|119412236|gb|EAW22177.1| signal recognition particle 19 kDa protein homolog [Neosartorya
fischeri NRRL 181]
Length = 257
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
C+YP Y ++ ++ EGR++ A++NP +DI D + GL E KL+P++ +
Sbjct: 59 CLYPVYFDKTRSRGEGRKVGTELAIENPLARDIVDAVQMLGLNVGFEPEKLHPKDWANP- 117
Query: 76 FVRGRARVQLKNDDGSPVNP 95
GR RV LK++DG+ +NP
Sbjct: 118 ---GRVRVMLKDEDGNLINP 134
>gi|336375126|gb|EGO03462.1| hypothetical protein SERLA73DRAFT_174951 [Serpula lacrymans var.
lacrymans S7.3]
gi|336388078|gb|EGO29222.1| hypothetical protein SERLADRAFT_456704 [Serpula lacrymans var.
lacrymans S7.9]
Length = 310
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 10 TDVERWVCIYPAYINRKKTLAEG-RRIPKAKAVDNPTYKDIDDVLSTTGLK-YHIENKLY 67
T ++W CIYP YI+ K++ G RRIP+ K+V P KDI D GL+ H NK +
Sbjct: 87 TPYKKWTCIYPIYIDAKRSYGTGERRIPREKSVWWPLSKDIADASVRLGLRSLHEVNKAH 146
Query: 68 PREISKEHFVRGRARVQLKND 88
PR+ GR RVQ K D
Sbjct: 147 PRDWENP----GRVRVQWKKD 163
>gi|429328699|gb|AFZ80459.1| signal recognition particle 19 kD protein, putative [Babesia equi]
Length = 130
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
D W IYP Y+++ T GRR+ + AV PT ++I V +K+ +E K YPR
Sbjct: 9 DTSDWTVIYPTYLDKNATTTRGRRVSLSLAVPKPTVEEIKLVCERLNVKHVVEPGKCYPR 68
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
+ V GR RV LK+ D +++ ++ + +LI +LK+RQ
Sbjct: 69 ----DWLVPGRVRVLLKDPDS---GEKTRSKKQLLNEIASLISQLKTRQ 110
>gi|70996590|ref|XP_753050.1| signal recognition particle 19 kDa protein [Aspergillus fumigatus
Af293]
gi|66850685|gb|EAL91012.1| signal recognition particle 19 kDa protein, putative [Aspergillus
fumigatus Af293]
gi|159131786|gb|EDP56899.1| signal recognition particle 19 kDa protein homolog [Aspergillus
fumigatus A1163]
Length = 257
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
C+YP Y ++ ++ AEGR++ A +NP +DI D + GL E KL+P++ +
Sbjct: 59 CLYPVYFDKTRSRAEGRKVGIELATENPLARDIVDAVQMLGLNVGFEPEKLHPKDWANP- 117
Query: 76 FVRGRARVQLKNDDGSPVNP 95
GR RV LK++DG+ +NP
Sbjct: 118 ---GRVRVMLKDEDGNLINP 134
>gi|124805888|ref|XP_001350566.1| signal recognition particle SRP19, putative [Plasmodium falciparum
3D7]
gi|23496690|gb|AAN36246.1| signal recognition particle SRP19, putative [Plasmodium falciparum
3D7]
gi|326787501|gb|AEA07717.1| signal recognition particle 19 [Plasmodium falciparum]
Length = 152
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 3 TIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI 62
TID K D RW IYP Y+N+KK + EGRRI V +PT +I + Y I
Sbjct: 25 TIDESK--DYSRWKIIYPNYLNKKKKVNEGRRINLKYCVSDPTVDEIALACKELNVSYVI 82
Query: 63 E-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGAL 110
E K YPR + + GR R++L N + +N F + + L L +
Sbjct: 83 EKKKYYPR----DWLIEGRIRIKLPNQNNDILNK-FELMKKIGLKLQTI 126
>gi|221061339|ref|XP_002262239.1| signal recognition particle 19 kd protein [Plasmodium knowlesi
strain H]
gi|193811389|emb|CAQ42117.1| signal recognition particle 19 kd protein,putative [Plasmodium
knowlesi strain H]
Length = 137
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
D RW IYP Y+NRKK + EGR+I V +P+ +I ++Y +E NK YPR
Sbjct: 15 DYSRWKIIYPNYLNRKKKVKEGRKINLDYCVADPSVDEIALACKELQVQYVVEKNKYYPR 74
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+ V GR R+++ + S + F A+M +G + +K+ G
Sbjct: 75 ----DWLVEGRIRIKMPDSGSSNIYSKF----ALMKQIGLKLQTIKANVG 116
>gi|258578489|ref|XP_002543426.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237903692|gb|EEP78093.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 139
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
CIYP Y + ++ AEGR++ K AV NP KDI D + GL E KL+P++ +
Sbjct: 60 CIYPIYFDATRSRAEGRKVTKKLAVRNPLAKDILDAVQLLGLNAGFEPEKLHPKDWANP- 118
Query: 76 FVRGRARVQLKNDDGSPVN 94
GR RV LK++DG +N
Sbjct: 119 ---GRIRVLLKHEDGRLIN 134
>gi|323448282|gb|EGB04183.1| hypothetical protein AURANDRAFT_16327 [Aureococcus anophagefferens]
Length = 99
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Query: 18 IYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEHF 76
I+P IN KK +++GRRI A ++P +++ +V L + IE K PR+++
Sbjct: 2 IWPNNINSKKFISQGRRISVEHACEDPIVQEMSEVCQYLNLTHVIEPYKSLPRDVAAYP- 60
Query: 77 VRGRARVQLKND-DGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
GR RVQL D DG VN +R A+M +G LIPKL R+
Sbjct: 61 --GRIRVQLALDGDGGRVN--IESRIALMRKMGELIPKLNIRK 99
>gi|340624425|ref|YP_004742878.1| Signal recognition particle protein SRP19 [Methanococcus
maripaludis X1]
gi|339904693|gb|AEK20135.1| Signal recognition particle protein SRP19 [Methanococcus
maripaludis X1]
Length = 89
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN-KLYPRE 70
+ ++PAYI+ K+T EGR++PK AV NP KDI + GL+Y +EN K YP+E
Sbjct: 4 IILWPAYIDLKRTKNEGRKVPKEIAVQNPKLKDIASKIKKMGLEYSVENKKSYPKE 59
>gi|302678525|ref|XP_003028945.1| hypothetical protein SCHCODRAFT_69985 [Schizophyllum commune H4-8]
gi|300102634|gb|EFI94042.1| hypothetical protein SCHCODRAFT_69985 [Schizophyllum commune H4-8]
Length = 298
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 10 TDVERWVCIYPAYINRKKTLAEG-RRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLY 67
T + W CIYP YI+ K+ G RRI + K V P KDI + + GL+ +E K +
Sbjct: 73 TPYKSWTCIYPIYIDAKRPYGTGQRRIARQKGVWWPLSKDIAEATNRLGLRTLMEPQKSH 132
Query: 68 PREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALI 111
PR+ GR RVQ K DG P+NP T++ ++ + I
Sbjct: 133 PRDWENP----GRVRVQWKQ-DGRPLNPAVQTKKQLLEMISFQI 171
>gi|407919186|gb|EKG12440.1| Signal recognition particle SRP19 subunit [Macrophomina phaseolina
MS6]
Length = 267
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 14 RWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN--KLYPREI 71
RW C+YP Y + +T AEGRR+ + AV +P ++I + ++ GL + + K +P++
Sbjct: 81 RWQCLYPVYFDASRTRAEGRRVGRELAVASPLAREIAEAVNHLGLTNVLLDPGKTHPKDW 140
Query: 72 SKEHFVRGRARVQLKNDDG 90
S GR RV+LK+ DG
Sbjct: 141 SNP----GRVRVELKDKDG 155
>gi|159905942|ref|YP_001549604.1| ribonucleoprotein complex SRP, Srp19 component [Methanococcus
maripaludis C6]
gi|238686985|sp|A9AAJ9.1|SRP19_METM6 RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|159887435|gb|ABX02372.1| Ribonucleoprotein complex SRP, Srp19 component [Methanococcus
maripaludis C6]
Length = 89
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 18 IYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN-KLYPRE 70
I+P YI+ K+T EGR++ K AV +P KDI D ++ GL+Y IEN K YPRE
Sbjct: 6 IWPTYIDSKRTKNEGRKVSKEFAVQSPKLKDIADKINKMGLEYSIENKKSYPRE 59
>gi|389740792|gb|EIM81982.1| hypothetical protein STEHIDRAFT_114659 [Stereum hirsutum FP-91666
SS1]
Length = 378
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 10/111 (9%)
Query: 10 TDV---ERWVCIYPAYINRKKTLAEG-RRIPKAKAVDNPTYKDIDDVLSTTGLK-YHIEN 64
TD+ ++W CIYP YI+ K+ G RR+P+ K+V P KDI + S L H +
Sbjct: 125 TDISIYKKWTCIYPIYIDAKQPYGTGTRRLPREKSVWWPLSKDIAEAASRLSLSALHEVH 184
Query: 65 KLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLK 115
K +PR+ GR RVQ K +G +NP T++ ++ + +I +LK
Sbjct: 185 KRHPRDWDNP----GRVRVQWKM-EGRLLNPGIRTKKQLLERISQVIQRLK 230
>gi|212533729|ref|XP_002147021.1| signal recognition particle 19 kDa protein, putative [Talaromyces
marneffei ATCC 18224]
gi|210072385|gb|EEA26474.1| signal recognition particle 19 kDa protein, putative [Talaromyces
marneffei ATCC 18224]
Length = 269
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
C+Y Y ++ +T EGR++ AV+NP +DI D GL+ E KL+P++ +
Sbjct: 69 CLYAVYFDKTRTRTEGRQVSSKLAVENPLARDILDACQRLGLRVGFEPEKLHPKDWANP- 127
Query: 76 FVRGRARVQLKNDDGSPVNP 95
GR RV LK++DG+ +NP
Sbjct: 128 ---GRVRVLLKDEDGNLLNP 144
>gi|345563692|gb|EGX46678.1| hypothetical protein AOL_s00097g582 [Arthrobotrys oligospora ATCC
24927]
Length = 270
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 14 RWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREIS 72
++ C+YP Y + K+ AEGRR+ K AV NP ++I L++ G + E K +P++ +
Sbjct: 90 KYQCVYPIYFDAAKSKAEGRRVGKKNAVPNPLAREIVASLNSQGFQTIFEPTKSHPKDWA 149
Query: 73 KEHFVRGRARVQLKNDDGSPVNPDFPTR 100
GR RV LK +DG PV+P T+
Sbjct: 150 NP----GRVRVLLK-EDGEPVHPTVKTK 172
>gi|299739997|ref|XP_001840397.2| signal recognition particle protein [Coprinopsis cinerea
okayama7#130]
gi|298404038|gb|EAU81453.2| signal recognition particle protein [Coprinopsis cinerea
okayama7#130]
Length = 325
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 10/115 (8%)
Query: 6 TKKHTDV---ERWVCIYPAYINRKKTLAEG-RRIPKAKAVDNPTYKDIDDVLSTTGL-KY 60
T K TD+ + W CIYP Y++ K+ G RR+ +AKA+ P KDI + + GL
Sbjct: 70 TGKVTDITPYKTWTCIYPIYLDAKRPYGTGQRRVARAKALWWPLSKDIAEAANRLGLGTL 129
Query: 61 HIENKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLK 115
H NK +PR+ GR RVQ K +G VNP T++ ++ + I LK
Sbjct: 130 HEVNKAHPRDWENP----GRVRVQWKK-NGKLVNPAVKTKKQLLEMISFQIQHLK 179
>gi|395331227|gb|EJF63608.1| signal recognition particle SRP19 subunit [Dichomitus squalens
LYAD-421 SS1]
Length = 302
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
Query: 10 TDVERWVCIYPAYINRKKTLAEG-RRIPKAKAVDNPTYKDIDDVLSTTGL-KYHIENKLY 67
T ++W CIYP YI+ K+ G RRI + K+V P KDI D + GL H +K +
Sbjct: 81 TPYKKWTCIYPIYIDAKRPGGRGERRIARGKSVWWPLSKDIADATNRLGLGTLHEVHKAH 140
Query: 68 PREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLK 115
PR+ GR RVQ K DG VNP T++ ++ + I LK
Sbjct: 141 PRDWENP----GRVRVQWKK-DGRLVNPAIKTKKQLLEMISIQIQMLK 183
>gi|84999658|ref|XP_954550.1| signal recognition particle [Theileria annulata]
gi|65305548|emb|CAI73873.1| signal recognition particle, putative [Theileria annulata]
Length = 129
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 12/119 (10%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
M T+D D W IYP Y+++ T ++GR++ + AV PT +I V + Y
Sbjct: 1 MGTVDE----DSSGWNIIYPTYLDKDCTTSQGRKVNLSVAVSKPTVDEIKIVCEKINIPY 56
Query: 61 HIEN-KLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
+E K YPR V GR RV LK+ N T++ ++ + +LI +LK+RQ
Sbjct: 57 VVEEKKRYPR----NWMVPGRVRVCLKDLQ---TNERTRTKKQLLNEIASLISQLKTRQ 108
>gi|50556606|ref|XP_505711.1| YALI0F21505p [Yarrowia lipolytica]
gi|1174433|sp|P41922.1|SEC65_YARLI RecName: Full=Signal recognition particle SEC65 subunit
gi|473183|emb|CAA80293.1| signal recognition particle protein (SRP19) [Yarrowia lipolytica]
gi|5834780|emb|CAB55335.1| SEC65 protein [Yarrowia lipolytica]
gi|49651581|emb|CAG78522.1| YALI0F21505p [Yarrowia lipolytica CLIB122]
Length = 310
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 8 KHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKL 66
+ +D + W +YP Y ++ KT+ EGRR+P AV+NP + I + L E +K
Sbjct: 114 QESDFKDWQIVYPVYFDKNKTVGEGRRVPLELAVENPLGQTIAEACKMLTLPSIYEAHKT 173
Query: 67 YPREISKEHFVRGRARVQLKND 88
+P++ + GR RVQLK+D
Sbjct: 174 HPKDWANP----GRVRVQLKDD 191
>gi|452822469|gb|EME29488.1| signal recognition particle subunit SRP19 isoform 2 [Galdieria
sulphuraria]
Length = 122
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 12 VERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPRE 70
+RW+CIYP YI+ +L +GR+I K D P+ ++I G + +E +K +PR
Sbjct: 16 AKRWICIYPVYIDASCSLFQGRKISKHLCSDTPSAEEIAKSCEQLGFETLLESDKKHPR- 74
Query: 71 ISKEHFVRGRARVQLKND 88
++F +GR RV L N+
Sbjct: 75 ---DNFRKGRIRVHLFNE 89
>gi|45358670|ref|NP_988227.1| Signal recognition particle protein SRP19 [Methanococcus
maripaludis S2]
gi|74554298|sp|Q6LY84.1|SRP19_METMP RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|45047536|emb|CAF30663.1| Signal recognition particle protein SRP19 [Methanococcus
maripaludis S2]
Length = 89
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN-KLYPRE 70
+ ++PAYI+ K+T EGR++PK A+ NP K+I + GL+Y +EN K YP+E
Sbjct: 4 IILWPAYIDLKRTKNEGRKVPKEIAIQNPKLKEIASKIKKMGLEYSVENKKSYPKE 59
>gi|409047029|gb|EKM56508.1| hypothetical protein PHACADRAFT_253679 [Phanerochaete carnosa
HHB-10118-sp]
Length = 301
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 14 RWVCIYPAYINRKKTLAEG-RRIPKAKAVDNPTYKDIDDVLSTTGLK-YHIENKLYPREI 71
+W CIYP YI+ K+ G RRI + KAV P +DI + S GL H K +PR+
Sbjct: 83 KWTCIYPIYIDAKRPYGTGERRIARQKAVWWPLSRDIAEAASRLGLGVLHEGQKAHPRDW 142
Query: 72 SKEHFVRGRARVQLKNDDGSPVNPDFPTREAVM 104
GR RVQ K DG +NP T++ ++
Sbjct: 143 ENP----GRVRVQWKK-DGRLMNPSIKTKKQLL 170
>gi|402584135|gb|EJW78077.1| hypothetical protein WUBG_11012 [Wuchereria bancrofti]
Length = 78
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 38/53 (71%)
Query: 66 LYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
++P + +++ +GR RVQL NDDGS + FPTR ++ML+ ++PKLK+RQ
Sbjct: 1 MHPLDPNRDANSQGRVRVQLHNDDGSLCDQKFPTRMSLMLYACEMVPKLKTRQ 53
>gi|426194714|gb|EKV44645.1| hypothetical protein AGABI2DRAFT_74829 [Agaricus bisporus var.
bisporus H97]
Length = 319
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 15 WVCIYPAYINRKKTLAEG-RRIPKAKAVDNPTYKDIDDVLSTTGL-KYHIENKLYPREIS 72
W CIYP Y++ K+ G RR+ +AK++ P KDI D + GL H NK +PR+
Sbjct: 82 WTCIYPIYLDAKRPYGTGQRRVQRAKSLWWPLSKDIADAANRLGLGTLHEVNKSHPRDWE 141
Query: 73 KEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLK 115
GR RVQ K DG VN T++ ++ + I KLK
Sbjct: 142 NP----GRVRVQWKK-DGRLVNSAIKTKKQLLETICFQIQKLK 179
>gi|409075258|gb|EKM75640.1| hypothetical protein AGABI1DRAFT_94709 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 319
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 15 WVCIYPAYINRKKTLAEG-RRIPKAKAVDNPTYKDIDDVLSTTGL-KYHIENKLYPREIS 72
W CIYP Y++ K+ G RR+ +AK++ P KDI D + GL H NK +PR+
Sbjct: 82 WTCIYPIYLDAKRPYGTGQRRVQRAKSLWWPLSKDIADAANRLGLGTLHEVNKSHPRDWE 141
Query: 73 KEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLK 115
GR RVQ K DG VN T++ ++ + I KLK
Sbjct: 142 NP----GRVRVQWKK-DGRLVNSAIKTKKQLLETICFQIQKLK 179
>gi|403417313|emb|CCM04013.1| predicted protein [Fibroporia radiculosa]
Length = 325
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 10 TDVERWVCIYPAYINRKKTLAEG-RRIPKAKAVDNPTYKDIDDVLSTTGL-KYHIENKLY 67
T ++W C+YP YI+ K+ G RRI + K+V P KDI GL H +K +
Sbjct: 81 TPYKKWTCVYPIYIDAKRPCGRGERRIARPKSVWWPLSKDIAGAADRLGLGALHEIHKAH 140
Query: 68 PREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVM 104
PR+ GR RVQ K DG VNP TR V+
Sbjct: 141 PRDWENP----GRVRVQWKK-DGRLVNPAIRTRPIVL 172
>gi|134045520|ref|YP_001097006.1| signal recognition particle subunit SRP19 (srp19) [Methanococcus
maripaludis C5]
gi|172044141|sp|A4FX62.1|SRP19_METM5 RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|132663145|gb|ABO34791.1| signal recognition particle, subunit SRP19 (srp19) [Methanococcus
maripaludis C5]
Length = 89
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 18 IYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN-KLYPRE 70
I+PAYI+ K+T EGR++PK AV NP KDI L GL+Y IE+ K YP++
Sbjct: 6 IWPAYIDLKRTKNEGRKVPKEFAVQNPKLKDIAGKLKKMGLEYSIEHKKSYPKD 59
>gi|308798643|ref|XP_003074101.1| Signal recognition particle, subunit Srp19 (ISS) [Ostreococcus
tauri]
gi|116000273|emb|CAL49953.1| Signal recognition particle, subunit Srp19 (ISS) [Ostreococcus
tauri]
Length = 306
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 13 ERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLST-TGLKYHIEN-KLYPRE 70
ER V P YI+ ++T AEGR+IP AV P +I GL+ IE K Y
Sbjct: 148 ERVVVCAP-YIDAERTRAEGRKIPTEDAVARPHVVEIAHACERGLGLRCEIEEEKCY--- 203
Query: 71 ISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
S++ +VRGR RV ++D+G+ P+ TR ++ + A + K R
Sbjct: 204 -SRDFWVRGRVRVTWRDDEGNLARPELDTRGKLLKAIAAEVKKYPERNA 251
>gi|150402285|ref|YP_001329579.1| ribonucleoprotein complex SRP, Srp19 component [Methanococcus
maripaludis C7]
gi|171472888|sp|A6VG52.1|SRP19_METM7 RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|150033315|gb|ABR65428.1| Ribonucleoprotein complex SRP, Srp19 component [Methanococcus
maripaludis C7]
Length = 89
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPRE 70
+ I+PAYI+ K+T EGR++PK AV NP KDI D + GL++ IE K YP E
Sbjct: 4 MIIWPAYIDIKRTKNEGRKVPKEFAVANPKLKDIADKIKKMGLEHSIEIKKSYPME 59
>gi|50424183|ref|XP_460678.1| DEHA2F07370p [Debaryomyces hansenii CBS767]
gi|52783346|sp|Q6BM93.1|SEC65_DEBHA RecName: Full=Signal recognition particle SEC65 subunit
gi|49656347|emb|CAG89015.1| DEHA2F07370p [Debaryomyces hansenii CBS767]
Length = 269
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 7 KKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NK 65
++ +++++ IYP Y ++ ++ +GRR+ ++KAV NP K I D L +E +K
Sbjct: 79 EERAELKKFQIIYPCYFDKSRSHKDGRRVSESKAVSNPLAKTISDACRHYNLPVMLELDK 138
Query: 66 LYPREISKEHFVRGRARVQLK--NDDGSPVNPDFPTREAVM 104
+P++ GR RV +K N +G PV+ F T+ AV+
Sbjct: 139 THPQDFGNP----GRVRVLIKDNNKNGMPVDSRFKTKRAVL 175
>gi|169598428|ref|XP_001792637.1| hypothetical protein SNOG_02019 [Phaeosphaeria nodorum SN15]
gi|160704391|gb|EAT90231.2| hypothetical protein SNOG_02019 [Phaeosphaeria nodorum SN15]
Length = 246
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 7 KKHTDVE---RWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE 63
K TD E + CIYP Y ++ +T AEGRR+ + AV+NP +++ D + GL+ E
Sbjct: 55 KTSTDRESSKHYQCIYPIYFDKARTRAEGRRVGQELAVENPLAREMADAAANLGLRTVFE 114
Query: 64 -NKLYPREISKEHFVRGRARVQLKND 88
+K +P+ GR RV LK D
Sbjct: 115 PDKTHPKNWENP----GRVRVLLKQD 136
>gi|390938756|ref|YP_006402494.1| Ribonucleoprotein complex SRP, Srp19 component [Desulfurococcus
fermentans DSM 16532]
gi|390191863|gb|AFL66919.1| Ribonucleoprotein complex SRP, Srp19 component [Desulfurococcus
fermentans DSM 16532]
Length = 98
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 14 RWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPR 69
R + +YPAYI+ KK+ +EGR+I +KAV NP+ K+I + GL E K YPR
Sbjct: 8 RRIVVYPAYIDSKKSRSEGRKISLSKAVPNPSIKEIIEASERLGLNPLYEEKHYPR 63
>gi|170112346|ref|XP_001887375.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164637701|gb|EDR01984.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 313
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Query: 10 TDVERWVCIYPAYINRKKTLAEG-RRIPKAKAVDNPTYKDIDDVLSTTGLK-YHIENKLY 67
T + W CIYP Y++ K+ G RR+ +AK++ P KDI D GL+ H K +
Sbjct: 89 TPYKTWTCIYPIYLDAKRPYGTGQRRVERAKSLWWPLSKDIADAAMRLGLRALHEITKTH 148
Query: 68 PREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLK 115
PR+ GR RVQ K DG VNP T++ ++ + I LK
Sbjct: 149 PRDWENP----GRVRVQWKK-DGKLVNPAVKTKKQLLEMICFQIQLLK 191
>gi|403220549|dbj|BAM38682.1| signal recognition particle [Theileria orientalis strain Shintoku]
Length = 138
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 10 TDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYP 68
TD W IYP Y+++ T ++GR++ + AV PT ++I VL + + +E K YP
Sbjct: 5 TDHSNWNIIYPTYLDKDSTTSQGRKVNLSIAVSKPTLEEIKSVLEHLNVPHILEPRKRYP 64
Query: 69 REISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
R V GR RV L D ++ + + ++ + LI +LK+RQ
Sbjct: 65 RNW----LVPGRVRVFL-GDHSVYLSHNARLEKQLLNEVATLISQLKTRQ 109
>gi|392587697|gb|EIW77030.1| signal recognition particle SRP19 subunit [Coniophora puteana
RWD-64-598 SS2]
Length = 324
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 10 TDVERWVCIYPAYINRKKTLAEG-RRIPKAKAVDNPTYKDIDDVLSTTGL-KYHIENKLY 67
T ++W CIYP YI+ K+ G RRI + K++ P KDI D S GL H K +
Sbjct: 83 TPYKKWTCIYPIYIDAKRAYGTGERRISREKSIWWPLSKDIADACSRLGLGTLHEVQKCH 142
Query: 68 PREISKEHFVRGRARVQLKND 88
PR+ GR RVQ + D
Sbjct: 143 PRDWENP----GRVRVQWRKD 159
>gi|218884236|ref|YP_002428618.1| signal recognition particle protein Srp19 [Desulfurococcus
kamchatkensis 1221n]
gi|254772970|sp|B8D570.1|SRP19_DESK1 RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|218765852|gb|ACL11251.1| signal recognition particle protein Srp19 [Desulfurococcus
kamchatkensis 1221n]
Length = 95
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 14 RWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPR 69
R + +YPAYI+ KK+ +EGR+I KAV NP+ K+I + GL E K YPR
Sbjct: 8 RRIVVYPAYIDSKKSRSEGRKISLGKAVPNPSIKEIIEASERLGLNPLYEEKHYPR 63
>gi|256811196|ref|YP_003128565.1| Ribonucleoprotein complex SRP, Srp19 component
[Methanocaldococcus fervens AG86]
gi|256794396|gb|ACV25065.1| Ribonucleoprotein complex SRP, Srp19 component
[Methanocaldococcus fervens AG86]
Length = 87
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 18 IYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI-ENKLYPRE 70
I+PAYI+++K+ EGRR+P+ A++ P+ KDI+ L GLK I K YPR+
Sbjct: 3 IWPAYIDKRKSRREGRRVPENLAIEKPSLKDIEKALKKLGLKPKIHREKRYPRQ 56
>gi|254586035|ref|XP_002498585.1| ZYRO0G13794p [Zygosaccharomyces rouxii]
gi|238941479|emb|CAR29652.1| ZYRO0G13794p [Zygosaccharomyces rouxii]
Length = 261
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 2 ATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYH 61
A + K+ +++ + +YP Y +++++ AEGRR+P AV+NP K + D + + GL
Sbjct: 73 AKMSRKEMDEIKNFQILYPCYFDKRRSHAEGRRVPLKLAVENPLAKTVADAVRSLGLLCI 132
Query: 62 IE-NKLYPREISKEHFVRGRARVQLKND 88
E +K +P++ GR RV K D
Sbjct: 133 FEGDKTHPQDFGNP----GRVRVLFKED 156
>gi|330936658|ref|XP_003305478.1| hypothetical protein PTT_18332 [Pyrenophora teres f. teres 0-1]
gi|311317460|gb|EFQ86406.1| hypothetical protein PTT_18332 [Pyrenophora teres f. teres 0-1]
Length = 244
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 7 KKHTDVER---WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE 63
K TD E+ + C+YP Y + +T AEGRR+ K AV+NP +++ D + GL E
Sbjct: 53 KTSTDREKSKHYQCLYPVYFDISRTRAEGRRVGKGLAVENPLAREMADAAADLGLGTVFE 112
Query: 64 -NKLYPREISKEHFVRGRARVQLKND 88
+K +P++ S GR RV LK++
Sbjct: 113 PDKTHPQDWSNP----GRVRVLLKHE 134
>gi|164656385|ref|XP_001729320.1| hypothetical protein MGL_3355 [Malassezia globosa CBS 7966]
gi|159103211|gb|EDP42106.1| hypothetical protein MGL_3355 [Malassezia globosa CBS 7966]
Length = 193
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 15 WVCIYPAYINRKKTLAEG-RRIPKAKAVDNPTYKDIDDVLSTTGLKY-HIENKLYPREIS 72
W C+YP Y++ K+ G RR+P KA+ P + I + L+Y H + +P++
Sbjct: 73 WTCVYPIYLDAKRRYRHGCRRVPYEKALLFPNSQLIANAARKLQLEYMHEPYRKHPQDWE 132
Query: 73 KEHFVRGRARVQLKNDDGSPVNPDFPTRE 101
GR +V L +D G+P+ P+FPT +
Sbjct: 133 NP----GRVKVHLFDDHGAPIRPEFPTND 157
>gi|156845465|ref|XP_001645623.1| hypothetical protein Kpol_541p8 [Vanderwaltozyma polyspora DSM
70294]
gi|156116289|gb|EDO17765.1| hypothetical protein Kpol_541p8 [Vanderwaltozyma polyspora DSM
70294]
Length = 271
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 2 ATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYH 61
T+ K+ +++ + +YP Y ++ ++ EGRR+PKA AV+NP K + D + GL
Sbjct: 81 TTMSRKEMEEIKGFQVLYPCYFDKNRSHKEGRRVPKALAVENPLAKTLADAVRDLGLLCI 140
Query: 62 IE-NKLYPREISKEHFVRGRARVQLKND 88
E K +P++ GR RV LK +
Sbjct: 141 FEGEKCHPQDFGNP----GRVRVLLKEN 164
>gi|156083635|ref|XP_001609301.1| signal recognition particle SRP19 subunit [Babesia bovis T2Bo]
gi|154796552|gb|EDO05733.1| signal recognition particle SRP19 subunit [Babesia bovis]
Length = 129
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Query: 12 VERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPRE 70
+ W +YP Y ++K T++ GRR+ K AV++P+ +DI V + Y +E +K+YPR+
Sbjct: 10 ISTWTILYPTYFDKKATVSGGRRVNKTLAVEDPSVEDIRIVCEKLKVPYKVERHKIYPRD 69
Query: 71 ISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
GR RV + + T+ + + I ++KS Q
Sbjct: 70 FLNP----GRIRVYFLDPNA---ESKATTKTGFISEIAPYIAQVKSTQ 110
>gi|32398768|emb|CAD98478.1| SRP19-domain protein [Cryptosporidium parvum]
Length = 241
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 28 TLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREISKEHFVRGRARVQLKN 87
T + GR V++PT +I +V G+ +E+K Y SK+ GR R QL +
Sbjct: 99 TKSSGRLSSLIHCVEDPTIAEIAEVCIQLGIPCKVESKRY----SKDCRTLGRVRFQLFD 154
Query: 88 DDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK------QANSEQNQ 128
+ G N T++ ++ +G +IPKLK+RQ ANS N+
Sbjct: 155 ESGRAFNDRILTKKILLNQIGIMIPKLKNRQNTTSSVIDHANSRNNK 201
>gi|150399185|ref|YP_001322952.1| ribonucleoprotein complex SRP, Srp19 component [Methanococcus
vannielii SB]
gi|171460836|sp|A6UPB8.1|SRP19_METVS RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|150011888|gb|ABR54340.1| Ribonucleoprotein complex SRP, Srp19 component [Methanococcus
vannielii SB]
Length = 89
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN-KLYPRE 70
+ I+PAY + K+T EGR++PK+ V NP KDI ++ G +Y I+N K YP+E
Sbjct: 4 IVIWPAYFDLKRTKNEGRKVPKSFGVLNPKLKDIVSIIEKMGHEYSIDNKKSYPKE 59
>gi|310798494|gb|EFQ33387.1| hypothetical protein GLRG_08666 [Glomerella graminicola M1.001]
Length = 159
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 3 TIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI 62
T D K++ D + C+YP Y + ++T AEGRR+PK+ AV+NP ++I + L
Sbjct: 69 TNDAKQYADFQ---CLYPVYFDARRTRAEGRRVPKSLAVENPIAREIVKACAALRLPTLF 125
Query: 63 E-NKLYPREISKEHFVRGRARV 83
E K +P++ + V+ R R
Sbjct: 126 EPAKFHPKDWANPGRVKIRIRF 147
>gi|393219949|gb|EJD05435.1| signal recognition particle, SRP19 subunit [Fomitiporia
mediterranea MF3/22]
Length = 299
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 11/111 (9%)
Query: 10 TDVERWVCIYPAYINRKKTLAEG-RRIPKAKAVDNPTYKDIDDVLSTTGL-KYHIENKLY 67
T ++W CIYP YI+ K+ G RR+ + KAV P KDI + + GL H K +
Sbjct: 84 TPYKKWTCIYPIYIDAKRRYGTGSRRVARPKAVWWPLSKDIAEATTRLGLGTLHEVQKSH 143
Query: 68 PREISKEHFVRGRARVQLKNDDGSPVNPDFPTR----EAVMLHLGALIPKL 114
P + GR RVQ K DG VN T+ EA+ ++ + P+L
Sbjct: 144 PSDWDNP----GRVRVQWKR-DGHFVNSRIKTKKQLLEAIAFYIQTVKPEL 189
>gi|452002278|gb|EMD94736.1| hypothetical protein COCHEDRAFT_105026 [Cochliobolus heterostrophus
C5]
Length = 210
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 7 KKHTDVER---WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE 63
K TD E+ + C+YP Y + ++ AEGRR+ K AV+NP +++ D + GL+ E
Sbjct: 19 KTTTDREKSKHYQCLYPIYFDISRSRAEGRRVGKELAVENPLAREMADAAADLGLRTVFE 78
Query: 64 -NKLYPREISKEHFVRGRARVQLKND 88
+K +P++ S GR RV LK++
Sbjct: 79 PDKTHPKDWSNP----GRVRVLLKHE 100
>gi|367034706|ref|XP_003666635.1| hypothetical protein MYCTH_2311498 [Myceliophthora thermophila ATCC
42464]
gi|347013908|gb|AEO61390.1| hypothetical protein MYCTH_2311498 [Myceliophthora thermophila ATCC
42464]
Length = 319
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 3 TIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI 62
T D K + + C+YP Y + ++ AEGRR+P++ AV NP DI + GL +
Sbjct: 88 TTDEKAYKSFQ---CLYPVYFDATRSRAEGRRVPRSMAVANPLAFDIVQACARLGLHTVL 144
Query: 63 E-NKLYPREISKEHFVRGRARVQLKN 87
E KL+P++ + GR +V L++
Sbjct: 145 EAGKLHPKDWANP----GRVKVDLRH 166
>gi|451845361|gb|EMD58674.1| hypothetical protein COCSADRAFT_103195 [Cochliobolus sativus
ND90Pr]
Length = 249
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 7 KKHTDVER---WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE 63
K TD E+ + C+YP Y + ++ AEGRR+ K AV+NP +++ D + GL+ E
Sbjct: 58 KTTTDREKSKHYQCLYPIYFDISRSRAEGRRVGKELAVENPLAREMADAAADLGLRTVFE 117
Query: 64 -NKLYPREISKEHFVRGRARVQLKND 88
+K +P++ S GR RV LK++
Sbjct: 118 PDKTHPKDWSNP----GRVRVLLKHE 139
>gi|312137508|ref|YP_004004845.1| ribonucleoprotein complex srp, srp19 component [Methanothermus
fervidus DSM 2088]
gi|311225227|gb|ADP78083.1| Ribonucleoprotein complex SRP, Srp19 component [Methanothermus
fervidus DSM 2088]
Length = 89
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKE 74
I+PA I+ KKT EGR+IPK AV +PT K++ + GL+ IE NK YPR +
Sbjct: 3 AVIWPANIDSKKTRKEGRKIPKKDAVKDPTIKEMYEAAKKLGLEPEIEKNKYYPRSWWER 62
Query: 75 HFVRGRARVQ 84
+GR R++
Sbjct: 63 ---KGRLRIK 69
>gi|21730695|pdb|1L9A|A Chain A, Crystal Structure Of Srp19 In Complex With The S Domain
Of Signal Recognition Particle Rna
Length = 87
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 6/75 (8%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI-ENKLYPREISKE 74
+ I+P+YI++KK+ EGR++P+ A++ P+ KDI+ L GL+ I +K YPR +
Sbjct: 1 MIIWPSYIDKKKSRREGRKVPEELAIEKPSLKDIEKALKKLGLEPKIYRDKRYPR----Q 56
Query: 75 HF-VRGRARVQLKND 88
H+ + GR V K +
Sbjct: 57 HWEIAGRVEVDYKGN 71
>gi|358399630|gb|EHK48967.1| hypothetical protein TRIATDRAFT_7675, partial [Trichoderma
atroviride IMI 206040]
Length = 276
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
C+YP Y + +T AEGRR+ A AV NP ++I + S L+ +E K++P++ S
Sbjct: 74 CLYPVYFDASRTRAEGRRVSAALAVKNPLAREIANACSRLRLQTLLEPEKIHPKDWSNP- 132
Query: 76 FVRGRARVQLKNDD--GSPVN 94
GR +V LK + GSP +
Sbjct: 133 ---GRVKVALKKEKAAGSPAS 150
>gi|240274413|gb|EER37929.1| signal recognition particle protein [Ajellomyces capsulatus H143]
Length = 254
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 7/77 (9%)
Query: 11 DVERWV-CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI--ENKLY 67
D+ R+ C+YP Y ++ ++ AEGR++ K AV+NP +DI D + GL+ I KL+
Sbjct: 68 DIPRYYQCLYPIYFDKTRSRAEGRKVNKKLAVENPLARDILDAVQVLGLRVGILEPEKLH 127
Query: 68 PREISKEHFVRGRARVQ 84
P++ + GR RV
Sbjct: 128 PKDWANP----GRVRVH 140
>gi|322694915|gb|EFY86733.1| signal recognition particle protein Sec65 [Metarhizium acridum CQMa
102]
Length = 272
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
CIYP Y + +TL++GRR+P + AV NP ++I + S L +E K +P++ +
Sbjct: 76 CIYPVYFDASRTLSQGRRVPASLAVRNPLAREIANACSRLRLPTLLEPEKTHPKDWANP- 134
Query: 76 FVRGRARVQLKNDDGSPVNP 95
GR +V LK +P NP
Sbjct: 135 ---GRVKVGLKQ---TPQNP 148
>gi|393231601|gb|EJD39192.1| signal recognition particle, SRP19 subunit [Auricularia delicata
TFB-10046 SS5]
Length = 294
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 3 TIDTKKHTDVERWVCIYPAYINRKKTLAEG-RRIPKAKAVDNPTYKDIDDVLSTTGLK-Y 60
I+ T ++W +YP YI+ K+ RR+ ++KAV P +D+ D GL+
Sbjct: 88 VINVTDTTPYKKWTTVYPIYIDAKRPYGPTQRRLARSKAVWWPLSQDLSDAARKLGLQCL 147
Query: 61 HIENKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALI 111
H K +PR+ GR +V LK DG V+P T+ ++ L A++
Sbjct: 148 HESTKFHPRDWENP----GRIKVLLKK-DGRAVHPSIKTKRQLVERLAAVV 193
>gi|430811767|emb|CCJ30790.1| unnamed protein product [Pneumocystis jirovecii]
Length = 230
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 14 RWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREIS 72
RW IYP Y + K+++ EGR++P AV NP K I + + G E NK +P++ +
Sbjct: 58 RWTIIYPIYFDVKRSIKEGRKVPVNMAVANPLAKTIANGAKSLGFLCIFESNKTHPKDWA 117
Query: 73 KEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQRDL 132
GR R+ K ++G+ V+ T++A+ L + + QAN + D
Sbjct: 118 NP----GRIRIFFK-ENGNYVHKSLKTKKALYKALSSYL---------QANPTKTTSLDA 163
Query: 133 SGG 135
S
Sbjct: 164 STS 166
>gi|448726454|ref|ZP_21708859.1| signal recognition particle 19 kDa protein [Halococcus morrhuae
DSM 1307]
gi|445795108|gb|EMA45644.1| signal recognition particle 19 kDa protein [Halococcus morrhuae
DSM 1307]
Length = 92
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PAY++ + EGRR+P+ AV PT +I G IE K YPR E+
Sbjct: 5 VIWPAYLDASLSRKEGRRVPRTVAVPEPTVDEIASAAGQVGYDVAIEREKTYPR----EY 60
Query: 76 FVRGRARVQLKNDDG 90
RGR +Q +DDG
Sbjct: 61 ESRGRVLIQDADDDG 75
>gi|118382662|ref|XP_001024487.1| SRP19 protein [Tetrahymena thermophila]
gi|89306254|gb|EAS04242.1| SRP19 protein [Tetrahymena thermophila SB210]
Length = 155
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVL-STTGLKYHIENKLYPREISK 73
W +YP Y++ + EGRR+ KA V N T ++ L +K YPRE
Sbjct: 14 WKTVYPHYLDSTLSQQEGRRVSKAVGVPNITIMEMAKALEKVKVPVVVEVHKSYPRET-- 71
Query: 74 EHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSR 117
++GR +V L +D VNP P+++ + + + +L R
Sbjct: 72 --MIKGRVKVMLFDDSNKLVNPSVPSKKVLYAKICEYVKQLDDR 113
>gi|358386917|gb|EHK24512.1| signal recognition particle, Sec65/Srp19 subunit [Trichoderma
virens Gv29-8]
Length = 285
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISK 73
+ C+YP Y + ++ AEGRR+ A AV NP ++I + S L+ +E K++P++ +
Sbjct: 89 YQCLYPVYFDASRSRAEGRRVSSALAVKNPLAREIANACSRLRLQTLLEPEKIHPKDWAN 148
Query: 74 EHFVRGRARVQLKNDDGS 91
GR +V LK GS
Sbjct: 149 P----GRVKVGLKKSPGS 162
>gi|15669223|ref|NP_248028.1| signal recognition particle subunit SRP19 [Methanocaldococcus
jannaschii DSM 2661]
gi|2500879|sp|Q58440.1|SRP19_METJA RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|21730768|pdb|1LNG|A Chain A, Crystal Structure Of The Srp19-7s.S Srp Rna Complex Of
M. Jannaschii
gi|158430968|pdb|2V3C|A Chain A, Crystal Structure Of The Srp54-Srp19-7s.S Srp Rna
Complex Of M. Jannaschii
gi|158430969|pdb|2V3C|B Chain B, Crystal Structure Of The Srp54-Srp19-7s.S Srp Rna
Complex Of M. Jannaschii
gi|323714480|pdb|3NDB|A Chain A, Crystal Structure Of A Signal Sequence Bound To The
Signal Recognition Particle
gi|1499877|gb|AAB99038.1| signal recognition particle, subunit SRP19 [Methanocaldococcus
jannaschii DSM 2661]
Length = 87
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 18 IYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI-ENKLYPRE 70
I+P+YI++KK+ EGR++P+ A++ P+ KDI+ L GL+ I +K YPR+
Sbjct: 3 IWPSYIDKKKSRREGRKVPEELAIEKPSLKDIEKALKKLGLEPKIYRDKRYPRQ 56
>gi|50291119|ref|XP_447992.1| hypothetical protein [Candida glabrata CBS 138]
gi|52783353|sp|Q6FP52.1|SEC65_CANGA RecName: Full=Signal recognition particle SEC65 subunit
gi|49527303|emb|CAG60943.1| unnamed protein product [Candida glabrata]
Length = 264
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 2 ATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYH 61
A I ++ +V+++ +YP Y ++ ++ EGRR+P AV+NP K I D + GL
Sbjct: 76 APITKQELDEVKKFQVLYPCYFDKNRSHKEGRRVPIEMAVENPLAKTISDAVREYGLLSI 135
Query: 62 IE-NKLYPREISKEHFVRGRARVQLKND 88
E +K +P++ GR RV LK +
Sbjct: 136 FEGDKCHPQDFGNP----GRIRVLLKEE 159
>gi|409721098|ref|ZP_11269316.1| signal recognition particle 19 kDa protein [Halococcus
hamelinensis 100A6]
gi|448721918|ref|ZP_21704460.1| signal recognition particle 19 kDa protein [Halococcus
hamelinensis 100A6]
gi|445790574|gb|EMA41232.1| signal recognition particle 19 kDa protein [Halococcus
hamelinensis 100A6]
Length = 92
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 18 IYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEHF 76
I+PAY++ + EGRR+P+ AV PT +I G IE K YPR EH
Sbjct: 6 IWPAYLDAGCSRTEGRRVPRRVAVPEPTVDEIARAAGQVGYDTVIEREKTYPR----EHA 61
Query: 77 VRGRARVQLKNDDG 90
RGR V+ +DDG
Sbjct: 62 ARGRVLVKDADDDG 75
>gi|68069431|ref|XP_676627.1| signal recognition particle 19 kd protein [Plasmodium berghei
strain ANKA]
gi|56496411|emb|CAH98589.1| signal recognition particle 19 kd protein, putative [Plasmodium
berghei]
Length = 140
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
D+ RW IYP Y+N+KK + EGR+I V +P+ +I + IE NK YPR
Sbjct: 15 DISRWNVIYPNYLNKKKKIKEGRKININFCVPDPSVHEISLACKELNIPCVIEQNKCYPR 74
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQ 128
+ V GR R+++ + N + AVM +G+ + +K+ + QN
Sbjct: 75 ----DWLVEGRVRIKIPIIENGKTN-----KFAVMRQIGSKLQTIKTNVDYNTSINQNN 124
>gi|399575225|ref|ZP_10768983.1| hypothetical protein HSB1_10220 [Halogranum salarium B-1]
gi|399239493|gb|EJN60419.1| hypothetical protein HSB1_10220 [Halogranum salarium B-1]
Length = 92
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
IYPAYI+ KT +EGRR+ AV++PT ++I + G +E +K Y RE +
Sbjct: 5 VIYPAYIDAAKTRSEGRRVALKDAVEDPTVEEIAKAVQQVGYDAVVERDKTYSREFEE-- 62
Query: 76 FVRGRARVQLKND 88
RGR VQ +D
Sbjct: 63 --RGRVLVQGADD 73
>gi|448728374|ref|ZP_21710703.1| signal recognition particle 19 kDa protein [Halococcus
saccharolyticus DSM 5350]
gi|445797078|gb|EMA47560.1| signal recognition particle 19 kDa protein [Halococcus
saccharolyticus DSM 5350]
Length = 92
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PAY++R+ + +EGRR+P++ AV PT +I G IE K YPRE
Sbjct: 5 VIWPAYLDRELSRSEGRRVPRSSAVPEPTVDEIARAAGQVGYDVVIEREKTYPREYEP-- 62
Query: 76 FVRGRARVQLKNDDG 90
RGR ++ +D G
Sbjct: 63 --RGRVLIENADDAG 75
>gi|389860386|ref|YP_006362625.1| signal recognition particle protein Srp19 [Thermogladius
cellulolyticus 1633]
gi|388525289|gb|AFK50487.1| signal recognition particle protein Srp19 [Thermogladius
cellulolyticus 1633]
Length = 96
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 14 RWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
R V IYP YI+ T +EGRR+PK+ V NPT ++I+ G + +E +K YPR
Sbjct: 8 RKVVIYPHYIDCSSTRSEGRRVPKSLCVPNPTLEEIEKAARRLGFEVEVEADKKYPR 64
>gi|388857459|emb|CCF48967.1| related to SEC65-signal recognition particle subunit [Ustilago
hordei]
Length = 379
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 14/116 (12%)
Query: 13 ERWVCIYPAYINRKKTLAEG-RRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN-KLYPRE 70
++WV IYP Y++ K+ +G RR+ KA PT I + L+Y E K +P++
Sbjct: 86 KKWVSIYPIYLDAKRHYRKGCRRVAYDKASPFPTQLWIAKAVGRLQLRYAQEPYKTHPQD 145
Query: 71 ISKEHFVRGRARVQLKNDDGSPVNPDFPTR--------EAVMLHLGALIPKLKSRQ 118
GR +V L N+DGSPV+ FP++ E + + G P ++ R+
Sbjct: 146 WENP----GRVKVHLFNEDGSPVDSRFPSKKHLFDAIAETIQPNCGGKPPAIEPRK 197
>gi|340522622|gb|EGR52855.1| predicted protein [Trichoderma reesei QM6a]
Length = 280
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
C+YP Y + ++ AEGRR+ A AV NP ++I + S L+ +E K++P++ +
Sbjct: 74 CLYPVYFDASRSRAEGRRVSAALAVKNPLAREIANACSRLRLQTLLEPEKIHPKDWANP- 132
Query: 76 FVRGRARVQLKNDDGS 91
GR +V LK +GS
Sbjct: 133 ---GRVKVGLKKMNGS 145
>gi|453087076|gb|EMF15117.1| signal recognition particle, SRP19 subunit [Mycosphaerella
populorum SO2202]
Length = 206
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTG--LKYHIENKLYPREISKE 74
CIYP Y + ++ GRR+ KA AV NP ++I D L+ G L ++ L P + +
Sbjct: 14 CIYPVYFDETRSREGGRRVSKADAVPNPLAREIVDALAHIGNTLGVALQIALDPMKTHPK 73
Query: 75 HFVR-GRARVQLKNDDGSPVNPDFPTREAVMLHLGALI 111
+ GR +V++K DG P++P + HL LI
Sbjct: 74 DWANPGRVKVEIKK-DGKPISPKIANKH----HLYKLI 106
>gi|322369338|ref|ZP_08043903.1| signal recognition particle 19 kDa protein [Haladaptatus
paucihalophilus DX253]
gi|320551070|gb|EFW92719.1| signal recognition particle 19 kDa protein [Haladaptatus
paucihalophilus DX253]
Length = 93
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKE 74
+ I+PAYI+ + T EGRR+P+ AV++PT +I + G IE +K Y RE
Sbjct: 4 IVIWPAYIDAELTRGEGRRVPQESAVEDPTVDEIARAVQQVGYDTVIERDKAYSRE---- 59
Query: 75 HFVRGRARVQLKNDDGSPVN 94
R RV ++N D S N
Sbjct: 60 -GWTARGRVLVQNADDSSKN 78
>gi|396489653|ref|XP_003843158.1| hypothetical protein LEMA_P089180.1 [Leptosphaeria maculans JN3]
gi|312219736|emb|CBX99679.1| hypothetical protein LEMA_P089180.1 [Leptosphaeria maculans JN3]
Length = 335
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
C+YP Y ++ ++ AEGRR+ AVD+P +++ D + GL+ E +K +P++ +
Sbjct: 157 CLYPIYFDKARSRAEGRRVGHKLAVDSPLAREMADAAANLGLRTVFEPDKTHPKDWANP- 215
Query: 76 FVRGRARVQLKND 88
GR RV LK++
Sbjct: 216 ---GRVRVLLKHE 225
>gi|401842382|gb|EJT44600.1| SEC65-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 274
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 3 TIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI 62
TI K +V+R+ +YP Y + ++ EGRR+PK AV+NP K + D + G+
Sbjct: 87 TISRKDLEEVKRFQILYPCYFDVNRSHKEGRRVPKDLAVENPLAKTMADAVRELGILCIF 146
Query: 63 E-NKLYPREISKEHFVRGRARVQLKND 88
E K +P++ GR RV K +
Sbjct: 147 EGEKCHPQDFGNP----GRVRVLFKEN 169
>gi|289193117|ref|YP_003459058.1| Ribonucleoprotein complex SRP, Srp19 component
[Methanocaldococcus sp. FS406-22]
gi|288939567|gb|ADC70322.1| Ribonucleoprotein complex SRP, Srp19 component
[Methanocaldococcus sp. FS406-22]
Length = 87
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 18 IYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI-ENKLYPRE 70
I+PAYI++KK+ EGRR+P+ A++N KDI+ L GL+ + +K YPR+
Sbjct: 3 IWPAYIDKKKSRKEGRRVPEDLAIENVKLKDIEKALKKLGLEPKVYRDKRYPRQ 56
>gi|449018958|dbj|BAM82360.1| probable signal recognition particle targeting component SRP19
[Cyanidioschyzon merolae strain 10D]
Length = 158
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 4 IDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE 63
+DT +W+ +YP Y +++++ A+GRR+ + AV P + +V K
Sbjct: 2 VDTAPAPGSGQWILVYPIYFSKERSRADGRRVSRRSAVSAP---EAAEVFRVCQEKLSFP 58
Query: 64 NKLYP-REISKEHFVRGRARVQL---KNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
L P ++ ++ FV GR +VQL +DDG+ + R+AV+ + + +L+ Q
Sbjct: 59 ALLEPDKKHPRDFFVAGRVKVQLPEEPSDDGALTH--TAKRKAVLRAIAKALQELRRTQA 116
Query: 120 KQANSEQNQQ 129
+ ++ Q+
Sbjct: 117 ATGSGQKAQK 126
>gi|261402426|ref|YP_003246650.1| Ribonucleoprotein complex SRP, Srp19 component
[Methanocaldococcus vulcanius M7]
gi|261369419|gb|ACX72168.1| Ribonucleoprotein complex SRP, Srp19 component
[Methanocaldococcus vulcanius M7]
Length = 85
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 18 IYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI-ENKLYPRE 70
I+PAYI+RKK+ EGR++PK A++N KDI+ L GL+ + K YPR+
Sbjct: 3 IWPAYIDRKKSRREGRKVPKNLAIENVKLKDIEKALKKLGLQPKTYKTKKYPRQ 56
>gi|322704114|gb|EFY95713.1| signal recognition particle protein Sec65 [Metarhizium anisopliae
ARSEF 23]
Length = 272
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
CIYP Y + +TL++GRR+P + AV +P ++I + S L +E K +P++ +
Sbjct: 76 CIYPVYFDASRTLSQGRRVPASLAVRSPLAREIANACSRLRLPTLLEPEKTHPKDWANP- 134
Query: 76 FVRGRARVQLKNDDGSPVNP 95
GR +V LK +P NP
Sbjct: 135 ---GRVKVGLKQ---TPQNP 148
>gi|302412827|ref|XP_003004246.1| signal recognition particle sec65 subunit [Verticillium albo-atrum
VaMs.102]
gi|261356822|gb|EEY19250.1| signal recognition particle sec65 subunit [Verticillium albo-atrum
VaMs.102]
Length = 283
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 3 TIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI 62
T D ++ D + C+YP Y + +T AEGRR+ A+AV NP ++I + + +
Sbjct: 67 TADASQYAD---YHCLYPVYFDAARTRAEGRRVSAARAVRNPLAREIVNACAALRIPTLF 123
Query: 63 E-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPT 99
E K +P++ + GR +V+L DD + V P P
Sbjct: 124 EPGKSHPKDWANP----GRVKVRLPRDDPA-VTPTRPV 156
>gi|156103135|ref|XP_001617260.1| signal recognition particle 19 kd protein [Plasmodium vivax Sal-1]
gi|148806134|gb|EDL47533.1| signal recognition particle 19 kd protein, putative [Plasmodium
vivax]
Length = 137
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 13/109 (11%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI---ENKLY 67
D RW IYP Y+N+KK + EGR+I V +P+ DI L+ LK +NK Y
Sbjct: 15 DYSRWKIIYPNYLNKKKKVKEGRKINLNYCVTDPSVDDI--ALACKELKVPCVVEKNKYY 72
Query: 68 PREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKS 116
PR + V GR R+++ + + S + F A+M +G + +KS
Sbjct: 73 PR----DWLVEGRIRIKMPDAESSNIFSKF----ALMKQIGLKLQTIKS 113
>gi|82595942|ref|XP_726057.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481304|gb|EAA17622.1| SRP19 protein, putative [Plasmodium yoelii yoelii]
Length = 142
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 10/121 (8%)
Query: 9 HTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLY 67
+ D+ RW IYP Y+N+KK + EGR+I V +P+ +I + IE NK Y
Sbjct: 13 NNDISRWNIIYPNYLNKKKKIKEGRKININFCVPDPSVHEISLACKELNIPCVIEQNKCY 72
Query: 68 PREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQN 127
PR + V GR R+++ + N + A+M +G+ + +K+ + QN
Sbjct: 73 PR----DWLVEGRVRIKIPIIENGKTN-----KFALMRQIGSKLQTIKTNVDYNTSINQN 123
Query: 128 Q 128
Sbjct: 124 N 124
>gi|367039385|ref|XP_003650073.1| hypothetical protein THITE_2109327 [Thielavia terrestris NRRL 8126]
gi|367054206|ref|XP_003657481.1| hypothetical protein THITE_2123245 [Thielavia terrestris NRRL 8126]
gi|346997334|gb|AEO63737.1| hypothetical protein THITE_2109327 [Thielavia terrestris NRRL 8126]
gi|347004747|gb|AEO71145.1| hypothetical protein THITE_2123245 [Thielavia terrestris NRRL 8126]
Length = 313
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
C+YP Y + +T AEGRR+P A AV NP DI ++ L +E KL+P++ +
Sbjct: 92 CLYPVYFDATRTRAEGRRVPLALAVRNPLAIDIVQACASLRLPTVLEAGKLHPKDWANP- 150
Query: 76 FVRGRARVQLKNDDGSPVNPDFPTRE 101
GR +V L+ +P PT +
Sbjct: 151 ---GRVKVDLRAQQQQ-QHPHLPTTQ 172
>gi|50306359|ref|XP_453153.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|52788218|sp|O13475.2|SEC65_KLULA RecName: Full=Signal recognition particle SEC65 subunit
gi|49642287|emb|CAH00249.1| KLLA0D01925p [Kluyveromyces lactis]
Length = 270
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 6 TKKHTD-VERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE- 63
TK+ D ++ + +YP Y + ++T A+GRR PK V+NP K I D + G+ E
Sbjct: 81 TKEELDEIKEFQMLYPCYFDTRRTHAQGRRAPKDLCVENPLAKTIADAARSLGIPSIFEG 140
Query: 64 NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLG 108
+K +P++ GR RV +K ++G P + +M +G
Sbjct: 141 SKTHPQDFGNP----GRVRVLIK-ENGKPFVSGIDNKRVLMKRIG 180
>gi|328874924|gb|EGG23289.1| signal recognition particle 19 kDa subunit [Dictyostelium
fasciculatum]
Length = 166
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 4 IDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE 63
++T + +++ +YP Y+N +GR++PK K V NP ++I ++ GL IE
Sbjct: 17 VNTSTIPNYKKFTVVYPQYMNSSLKRDQGRKVPKDKGVKNPMLEEIAKAIAMLGLHPIIE 76
Query: 64 -NKLYPREISKEHFVRGRARVQLKN 87
+K YP + + RGR R+Q+ N
Sbjct: 77 TSKGYP----ADFYQRGRIRLQIIN 97
>gi|365986531|ref|XP_003670097.1| hypothetical protein NDAI_0E00380 [Naumovozyma dairenensis CBS 421]
gi|343768867|emb|CCD24854.1| hypothetical protein NDAI_0E00380 [Naumovozyma dairenensis CBS 421]
Length = 278
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN-KLYPR 69
D++++ +YP Y ++ ++ EGRR+PK AV+NP K + D GL E+ K +P+
Sbjct: 95 DMKKFQILYPCYFDKNRSHKEGRRVPKELAVENPLAKTMADAAGNLGLICVFEDQKTHPQ 154
Query: 70 EISKEHFVRGRARVQLKND 88
+ GR R+ LK +
Sbjct: 155 DFGNP----GRIRILLKQN 169
>gi|406696560|gb|EKC99842.1| signal recognition particle protein [Trichosporon asahii var.
asahii CBS 8904]
Length = 338
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
D W +YP Y + K ++ +GRR+P+AKA+ P I ++ GL +E K +P
Sbjct: 128 DPSTWHSVYPRYFDAKVSVKDGRRVPRAKALWWPQAAHIARACASLGLPSVLEPEKTHPA 187
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLG 108
+ GR +VQL DG+ VNP R + L L
Sbjct: 188 DWENP----GRVKVQLTR-DGAVVNPRASNRTQLYLLLA 221
>gi|408394032|gb|EKJ73288.1| hypothetical protein FPSE_06553 [Fusarium pseudograminearum CS3096]
Length = 272
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 2 ATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYH 61
A+ D + D + C+YP Y + ++ AEGRR+ AV +P ++I + S L+
Sbjct: 67 ASADRSAYADFQ---CLYPVYFDASRSRAEGRRVSAELAVKDPLAREIANACSRLRLQTL 123
Query: 62 IE-NKLYPREISKEHFVRGRARVQLKNDDGSPV 93
E K++P++ + GR +V LK G PV
Sbjct: 124 FEPEKVHPKDWANP----GRVKVGLKKSSGHPV 152
>gi|46121549|ref|XP_385329.1| hypothetical protein FG05153.1 [Gibberella zeae PH-1]
Length = 273
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 2 ATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYH 61
A+ D + D + C+YP Y + ++ AEGRR+ AV +P ++I + S L+
Sbjct: 67 ASADRSAYADFQ---CLYPVYFDASRSRAEGRRVSAELAVKDPLAREIANACSRLRLQTL 123
Query: 62 IE-NKLYPREISKEHFVRGRARVQLKNDDGSPV 93
E K++P++ + GR +V LK G PV
Sbjct: 124 FEPEKVHPKDWANP----GRVKVGLKKSSGHPV 152
>gi|448738806|ref|ZP_21720827.1| signal recognition particle 19 kDa protein [Halococcus
thailandensis JCM 13552]
gi|445801192|gb|EMA51536.1| signal recognition particle 19 kDa protein [Halococcus
thailandensis JCM 13552]
Length = 92
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PAY++ + EGRR+P+ AV PT +I G IE K YPR E+
Sbjct: 5 VIWPAYLDASLSRNEGRRVPRTVAVPEPTVDEIASAAGQVGYDVAIEREKTYPR----EY 60
Query: 76 FVRGRARVQLKNDDG 90
RGR ++ +DDG
Sbjct: 61 ESRGRVLIKDADDDG 75
>gi|401881590|gb|EJT45887.1| signal recognition particle protein [Trichosporon asahii var.
asahii CBS 2479]
Length = 338
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
D W +YP Y + K ++ +GRR+P+AKA+ P I ++ GL +E K +P
Sbjct: 128 DPSTWHSVYPRYFDAKVSVKDGRRVPRAKALWWPQAAHIARACASLGLPSVLEPEKTHPA 187
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLG 108
+ GR +VQL DG+ VNP R + L L
Sbjct: 188 DWENP----GRVKVQLTR-DGAVVNPRASNRTQLYLLLA 221
>gi|429963309|gb|ELA42853.1| hypothetical protein VICG_00168 [Vittaforma corneae ATCC 50505]
Length = 122
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 12 VERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPRE 70
E+ IYP YIN +L GR+ +V PT+K+I L + G+KY E K++P+E
Sbjct: 5 TEKCFIIYPIYINSSVSLGRGRKYSLKNSVSKPTFKEIKHALDSLGVKYEEEPEKMHPKE 64
Query: 71 ISKEHFVRGRARV 83
KE +GR R+
Sbjct: 65 -GKE---KGRFRI 73
>gi|323307796|gb|EGA61058.1| Sec65p [Saccharomyces cerevisiae FostersO]
Length = 266
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 3 TIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI 62
I K +V+R+ +YP Y + ++ EGRR+PK AV+NP K + D + G+
Sbjct: 86 AISKKDLEEVKRFQVLYPCYFDINRSHKEGRRVPKELAVENPLAKTMADAVRELGILCIF 145
Query: 63 E-NKLYPREISKEHFVRGRARVQLKND 88
E K +P++ GR RV K +
Sbjct: 146 EGEKCHPQDFGNP----GRIRVLFKEN 168
>gi|71019799|ref|XP_760130.1| hypothetical protein UM03983.1 [Ustilago maydis 521]
gi|46099760|gb|EAK84993.1| hypothetical protein UM03983.1 [Ustilago maydis 521]
Length = 376
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 14/118 (11%)
Query: 11 DVERWVCIYPAYINRKKTLAEG-RRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN-KLYP 68
+ ++WV IYP Y + K+ +G RR+ K+ PT I + LKY E K +P
Sbjct: 81 EFKKWVSIYPIYFDAKRHYGKGCRRVSYEKSSAFPTQLWIAKAVGRLELKYVQEPFKTHP 140
Query: 69 REISKEHFVRGRARVQLKNDDGSPVNPDFPTR--------EAVMLHLGALIPKLKSRQ 118
++ GR +VQL NDDG P+N ++ E + + G P L+ R+
Sbjct: 141 QDWENP----GRVKVQLFNDDGEPINSRLASKKQLFDAVAETIQPNCGGKPPTLEPRK 194
>gi|401624436|gb|EJS42493.1| sec65p [Saccharomyces arboricola H-6]
Length = 270
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 3 TIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI 62
I K +V+R+ +YP Y + ++ EGRR+PK AV+NP K + D + G+
Sbjct: 83 AISRKDLEEVKRFQVLYPCYFDVNRSHKEGRRVPKELAVENPLAKTMADAVRELGILCIF 142
Query: 63 E-NKLYPREISKEHFVRGRARVQLKND 88
E K +P++ GR RV K +
Sbjct: 143 EGEKCHPQDFGNP----GRIRVLFKEN 165
>gi|288932857|ref|YP_003436917.1| ribonucleoprotein complex SRP, Srp19 component [Ferroglobus
placidus DSM 10642]
gi|288895105|gb|ADC66642.1| Ribonucleoprotein complex SRP, Srp19 component [Ferroglobus
placidus DSM 10642]
Length = 97
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREISKE 74
W+ I+ +++KK+ +EGR+IPK AV N +K++ + GL+++ E K YP+ +E
Sbjct: 11 WI-IWTVNLDKKKSRSEGRKIPKRYAVPNVKFKELIEACKALGLEFYAEEKKYPKSWWEE 69
Query: 75 HFVRGRARVQ 84
GR RV+
Sbjct: 70 G---GRVRVK 76
>gi|365763657|gb|EHN05183.1| Sec65p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 269
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 3 TIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI 62
I K +V+R+ +YP Y + ++ EGRR+PK AV+NP K + D + G+
Sbjct: 86 AISKKDLEEVKRFQVLYPCYFDINRSHKEGRRVPKELAVENPLAKTMADAVRELGILCIF 145
Query: 63 E-NKLYPREISKEHFVRGRARVQLKND 88
E K +P++ GR RV K +
Sbjct: 146 EGEKCHPQDFGNP----GRIRVLFKEN 168
>gi|349580184|dbj|GAA25344.1| K7_Sec65p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 273
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 3 TIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI 62
I K +V+R+ +YP Y + ++ EGRR+PK AV+NP K + D + G+
Sbjct: 86 AISKKDLEEVKRFQVLYPCYFDINRSHKEGRRVPKELAVENPLAKTMADAVRELGILCIF 145
Query: 63 E-NKLYPREISKEHFVRGRARVQLKND 88
E K +P++ GR RV K +
Sbjct: 146 EGEKCHPQDFGNP----GRIRVLFKEN 168
>gi|6323531|ref|NP_013602.1| Sec65p [Saccharomyces cerevisiae S288c]
gi|266993|sp|P29478.1|SEC65_YEAST RecName: Full=Signal recognition particle subunit SEC65
gi|671640|emb|CAA46666.1| SEC65 [Saccharomyces cerevisiae]
gi|798895|emb|CAA89113.1| Sec65p [Saccharomyces cerevisiae]
gi|51013741|gb|AAT93164.1| YML105C [Saccharomyces cerevisiae]
gi|151946058|gb|EDN64289.1| secretory subuint [Saccharomyces cerevisiae YJM789]
gi|190408142|gb|EDV11407.1| signal recognition particle SEC65 subunit [Saccharomyces cerevisiae
RM11-1a]
gi|207342603|gb|EDZ70323.1| YML105Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270037|gb|EEU05283.1| Sec65p [Saccharomyces cerevisiae JAY291]
gi|259148468|emb|CAY81713.1| Sec65p [Saccharomyces cerevisiae EC1118]
gi|285813898|tpg|DAA09793.1| TPA: Sec65p [Saccharomyces cerevisiae S288c]
gi|323303686|gb|EGA57473.1| Sec65p [Saccharomyces cerevisiae FostersB]
gi|323332238|gb|EGA73648.1| Sec65p [Saccharomyces cerevisiae AWRI796]
gi|323336148|gb|EGA77419.1| Sec65p [Saccharomyces cerevisiae Vin13]
gi|323347266|gb|EGA81540.1| Sec65p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352933|gb|EGA85233.1| Sec65p [Saccharomyces cerevisiae VL3]
gi|392297309|gb|EIW08409.1| Sec65p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|228680|prf||1808303A SEC65 gene
Length = 273
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 3 TIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI 62
I K +V+R+ +YP Y + ++ EGRR+PK AV+NP K + D + G+
Sbjct: 86 AISKKDLEEVKRFQVLYPCYFDINRSHKEGRRVPKELAVENPLAKTMADAVRELGILCIF 145
Query: 63 E-NKLYPREISKEHFVRGRARVQLKND 88
E K +P++ GR RV K +
Sbjct: 146 EGEKCHPQDFGNP----GRIRVLFKEN 168
>gi|389586270|dbj|GAB68999.1| signal recognition particle 19 kd protein [Plasmodium cynomolgi
strain B]
Length = 148
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 15/126 (11%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
D RW IYP Y+N+KK + EGR+I V +P+ +I ++ +E NK YPR
Sbjct: 15 DYSRWKIIYPNYLNKKKKVKEGRKINLNYCVTDPSVDEIALACKELKVQCVVEKNKYYPR 74
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQ 129
+ V GR R+++ + + S + F + + L L Q +AN E
Sbjct: 75 ----DWLVEGRIRIKMPDAESSNIYSKFALMKQIGLKL----------QTIKANVEPTVA 120
Query: 130 RDLSGG 135
D+ G
Sbjct: 121 GDMLGN 126
>gi|343425065|emb|CBQ68602.1| related to SEC65-signal recognition particle subunit [Sporisorium
reilianum SRZ2]
Length = 380
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 6 TKKHTDVERWVCIYPAYINRKKTLAEG-RRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN 64
TK + ++WV +YP Y + K+ +G RR+ K+ PT I + LKY E
Sbjct: 77 TKDDGEHKKWVSVYPIYFDAKRHYGKGCRRVSYEKSSPFPTQLWIAKAVGRLQLKYVQEP 136
Query: 65 -KLYPREISKEHFVRGRARVQLKNDDGSPVNPDF 97
K +P++ GR +VQL ND+G PVN F
Sbjct: 137 YKTHPQDWENP----GRVKVQLFNDEGEPVNSRF 166
>gi|313238720|emb|CBY13743.1| unnamed protein product [Oikopleura dioica]
Length = 133
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 9/75 (12%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYH----IENKLYPRE 70
W IYP YIN K+++ GRR+ + AV+NPT +I L+ G K E+K++P+
Sbjct: 15 WQSIYPLYINSKRSVKCGRRLSRESAVENPTIDEIVQALAQIGFKNEENMLKEDKVHPQA 74
Query: 71 IS----KEHFVRGRA 81
+ K+H VRG A
Sbjct: 75 RTTWNPKDH-VRGFA 88
>gi|410074527|ref|XP_003954846.1| hypothetical protein KAFR_0A02750 [Kazachstania africana CBS 2517]
gi|372461428|emb|CCF55711.1| hypothetical protein KAFR_0A02750 [Kazachstania africana CBS 2517]
Length = 266
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 7 KKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NK 65
+K +++ + +YP Y ++ ++ EGRR+PK AV+NP K I D + G+ +E K
Sbjct: 79 EKLNEIKTYQILYPCYFDKNRSHKEGRRVPKELAVENPLAKTIADAARSLGVLSILEGEK 138
Query: 66 LYPREISKEHFVRGRARVQLKND 88
+P++ GR R+ K D
Sbjct: 139 THPQDFGNP----GRVRILFKKD 157
>gi|333911572|ref|YP_004485305.1| signal recognition particle protein [Methanotorris igneus Kol 5]
gi|333752161|gb|AEF97240.1| Signal recognition particle 19 kDa protein [Methanotorris igneus
Kol 5]
Length = 86
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 18 IYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI-ENKLYPRE 70
I+P YI++ K+ EGR++PK A++NP K+I+ L G + +K YPRE
Sbjct: 3 IWPNYIDKNKSRKEGRKVPKDIAIENPKLKEIEAALKKMGYNVKVYRDKCYPRE 56
>gi|146419590|ref|XP_001485756.1| hypothetical protein PGUG_01427 [Meyerozyma guilliermondii ATCC
6260]
gi|146389171|gb|EDK37329.1| hypothetical protein PGUG_01427 [Meyerozyma guilliermondii ATCC
6260]
Length = 267
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 58/106 (54%), Gaps = 7/106 (6%)
Query: 2 ATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYH 61
A ++ ++R+ +YP Y ++ ++ EGRR+ +++AV+NP K I D + L
Sbjct: 75 AKFSQEEREHLKRFQIVYPCYFDKNRSHKEGRRVSESRAVENPLAKTISDACRSFNLPVI 134
Query: 62 IE-NKLYPREISKEHFVRGRARVQLKNDD--GSPVNPDFPTREAVM 104
+E +K +P++ GR RV +K++ G +P + T+ +++
Sbjct: 135 LELDKSHPQDFGNP----GRVRVLIKDNSNGGQLSDPKYQTKRSLL 176
>gi|403216896|emb|CCK71392.1| hypothetical protein KNAG_0G03340 [Kazachstania naganishii CBS
8797]
Length = 276
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
+++++ +YP Y ++ ++ GRR+P +AV+NP K + D + + GL E K +P+
Sbjct: 93 EMKKFQVLYPCYFDKNRSHKNGRRVPVTEAVENPLAKTVADAVRSVGLLCVFEGEKTHPQ 152
Query: 70 EISKEHFVRGRARVQLKND 88
+ GR RV LK +
Sbjct: 153 DFGNP----GRVRVLLKEN 167
>gi|432329788|ref|YP_007247931.1| signal recognition particle 19 kDa protein [Methanoregula
formicicum SMSP]
gi|432136497|gb|AGB01424.1| signal recognition particle 19 kDa protein [Methanoregula
formicicum SMSP]
Length = 91
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 18 IYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREISKEHFV 77
IYP Y N + AEGRR+P++ V P D++ L +G+ + E+K +P H+
Sbjct: 8 IYPCYFNAAYSRAEGRRVPRSIGVKAPVLTDLERALKKSGIPFRAEDKHHP-----AHWT 62
Query: 78 R--GRARVQLKN 87
R GR V+ K
Sbjct: 63 RREGRLVVEWKE 74
>gi|123439908|ref|XP_001310720.1| SRP19 protein [Trichomonas vaginalis G3]
gi|121892502|gb|EAX97790.1| SRP19 protein [Trichomonas vaginalis G3]
Length = 155
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 56/108 (51%), Gaps = 12/108 (11%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLK--YHIENKLYPREISK 73
+ IYP YI+ + T +GR++PK + V NP ++I + G + Y ++ K +PR K
Sbjct: 34 IFIYPCYIDNEMTEFQGRKLPKEQCVQNPFIEEISRAIFELGFEGIYSMQ-KRHPRNFWK 92
Query: 74 EHFVRGRARVQL-KNDDGS----PVNPDFPTREAVMLHLGALIPKLKS 116
GRA + K D+ + P+ P +P R+ V + I ++++
Sbjct: 93 F----GRAAITFYKKDEATGNRVPIYPQYPKRKDVYRAIAKKIVEIRA 136
>gi|333986725|ref|YP_004519332.1| Signal recognition particle 19 kDa protein [Methanobacterium sp.
SWAN-1]
gi|333824869|gb|AEG17531.1| Signal recognition particle 19 kDa protein [Methanobacterium sp.
SWAN-1]
Length = 90
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN-KLYPR 69
I+P Y++ KKT EGRRI K AV +P ++I G+K IEN K YP+
Sbjct: 4 IIWPVYLDSKKTKGEGRRISKDSAVTSPKLREISKAAEKLGMKPKIENSKAYPK 57
>gi|443897599|dbj|GAC74939.1| predicted protein tyrosine phosphatase [Pseudozyma antarctica T-34]
Length = 380
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 13 ERWVCIYPAYINRKKTLAEG-RRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN-KLYPRE 70
++WV +YP Y + K+ +G RR+ KA PT + ++ LKY E K +P++
Sbjct: 88 KKWVSVYPIYFDAKRHYRKGCRRVSYEKASPFPTQLWVAKAVARLQLKYVQEPYKTHPQD 147
Query: 71 ISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALI 111
GR +VQL NDDGS +N F +++ + + ++
Sbjct: 148 WENP----GRVKVQLFNDDGSALNSRFASKKQLFDAIAEIL 184
>gi|296424512|ref|XP_002841792.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638040|emb|CAZ85983.1| unnamed protein product [Tuber melanosporum]
Length = 249
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
C+YP Y + ++ AEGRR+ K A+ NP ++I D + LK E K +P++ +
Sbjct: 68 CLYPIYFDSTRSRAEGRRVNKTHAIPNPLARNIVDACAYLSLKTVFEPGKTHPKDWANP- 126
Query: 76 FVRGRARVQLKND 88
GR RV K D
Sbjct: 127 ---GRVRVLFKAD 136
>gi|413954821|gb|AFW87470.1| hypothetical protein ZEAMMB73_194269 [Zea mays]
Length = 260
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 45 TYKDIDDVLSTTGLKYHIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAV 103
++ D+ S + + IE +K YP++I F GRARVQLK DDGSP+NP T E
Sbjct: 158 SHSFFDNCCSHLKILHTIELDKSYPQDI----FQAGRARVQLKKDDGSPINPAIKTSEQT 213
Query: 104 MLHLGALIPKL 114
L PKL
Sbjct: 214 AYLLS---PKL 221
>gi|449296199|gb|EMC92219.1| hypothetical protein BAUCODRAFT_78358 [Baudoinia compniacensis
UAMH 10762]
Length = 211
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 9 HTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLS----TTGLKYHI-- 62
H + + C+YP Y + ++ EGRR+ K AV NP ++I D S T G+ I
Sbjct: 2 HEKSKNFQCLYPVYFDSARSREEGRRVRKDDAVSNPLAREIADACSHVGQTLGVPLQIVF 61
Query: 63 -ENKLYPREISKEHFVRGRARVQLKND 88
+K +P++ + GR RV++K D
Sbjct: 62 EPHKGHPKDWANP----GRVRVEVKRD 84
>gi|336122162|ref|YP_004576937.1| Signal recognition particle 19 kDa protein [Methanothermococcus
okinawensis IH1]
gi|334856683|gb|AEH07159.1| Signal recognition particle 19 kDa protein [Methanothermococcus
okinawensis IH1]
Length = 91
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI-ENKLYPREISKE 74
+ I+P YI+ +K+ EGR++PK V NP K+I + L G I +NK YP KE
Sbjct: 4 IIIWPVYIDVEKSRKEGRKVPKELGVKNPKLKNIFNALKKMGYSAEIVKNKSYP----KE 59
Query: 75 HF-VRGRARVQLKNDDG 90
H+ + G +V + +++
Sbjct: 60 HWEISGYIKVNIDDENN 76
>gi|389644542|ref|XP_003719903.1| signal recognition particle protein Sec65 [Magnaporthe oryzae
70-15]
gi|351639672|gb|EHA47536.1| signal recognition particle protein Sec65 [Magnaporthe oryzae
70-15]
gi|440470001|gb|ELQ39090.1| signal recognition particle SEC65 subunit [Magnaporthe oryzae Y34]
gi|440480389|gb|ELQ61054.1| signal recognition particle SEC65 subunit [Magnaporthe oryzae P131]
Length = 273
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
C+YP Y + +T AEGRR+ +++AV NP ++I L+ E K +PR+ +
Sbjct: 75 CLYPVYFDATRTRAEGRRVKRSEAVPNPLAREIAQACGNLQLQALFEPTKTHPRDWANP- 133
Query: 76 FVRGRARVQLK 86
GR +V++K
Sbjct: 134 ---GRVKVKVK 141
>gi|284165108|ref|YP_003403387.1| ribonucleoprotein complex SRP, Srp19 component [Haloterrigena
turkmenica DSM 5511]
gi|284014763|gb|ADB60714.1| Ribonucleoprotein complex SRP, Srp19 component [Haloterrigena
turkmenica DSM 5511]
Length = 93
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PAY++ +T +EGRR+ + AVD PT +I + G IE +K Y S+EH
Sbjct: 5 VIWPAYLDANRTRSEGRRVSQDLAVDEPTVDEIAKAVQQIGYDATIERDKAY----SREH 60
Query: 76 FVRGRARVQLKNDDGSPVN 94
+ R RV ++ D S N
Sbjct: 61 WA-DRGRVVVRGADDSTKN 78
>gi|342884059|gb|EGU84402.1| hypothetical protein FOXB_05067 [Fusarium oxysporum Fo5176]
Length = 275
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 2 ATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYH 61
A+ D + D + C+YP Y + ++ AEGRR+ AV +P ++I + S L
Sbjct: 71 ASADRSAYADFQ---CLYPVYFDASRSRAEGRRVGAELAVKDPLAREIANACSRLRLPTL 127
Query: 62 IE-NKLYPREISKEHFVRGRARVQLKNDDGSPV 93
E K++P++ + GR +V LK G PV
Sbjct: 128 FEPEKVHPKDWANP----GRVKVGLKKTPGHPV 156
>gi|395646541|ref|ZP_10434401.1| Ribonucleoprotein complex SRP, Srp19 component [Methanofollis
liminatans DSM 4140]
gi|395443281|gb|EJG08038.1| Ribonucleoprotein complex SRP, Srp19 component [Methanofollis
liminatans DSM 4140]
Length = 90
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 12 VERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREI 71
+ER +YP Y AEGRR+P+ +AV + T +++ L G Y +E K +P
Sbjct: 1 MERLCILYPCYFQAGLKRAEGRRVPRGRAVKSLTLMELEAALKKCGYPYRVEEKHHP--- 57
Query: 72 SKEHFVRGRARVQLKNDDGSPVN 94
+ H GR V G +
Sbjct: 58 AHWHKREGRVAVTCTEPKGEVIR 80
>gi|365759208|gb|EHN01012.1| Sec65p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 274
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 3 TIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI 62
I K +V+R+ +YP Y + ++ EGRR+P+ AV+NP K + D + G+
Sbjct: 87 AISRKDLEEVKRFQILYPCYFDVNRSHKEGRRVPEDLAVENPLAKTMADAVRELGILCIF 146
Query: 63 E-NKLYPREISKEHFVRGRARVQLKND 88
E K +P++ GR RV K +
Sbjct: 147 EGEKCHPQDFGNP----GRVRVLFKEN 169
>gi|363750021|ref|XP_003645228.1| hypothetical protein Ecym_2704 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888861|gb|AET38411.1| Hypothetical protein Ecym_2704 [Eremothecium cymbalariae
DBVPG#7215]
Length = 263
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 12 VERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPRE 70
++++ +YP Y ++ +T +GR++P AV+NP K I D G+ E K +P++
Sbjct: 88 LKKFQILYPCYFDKNRTHKQGRKVPVELAVENPLAKTIADACRYLGMVCVFEGEKTHPQD 147
Query: 71 ISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVM 104
GR RV LK +D P++ + T+ +M
Sbjct: 148 FGNP----GRVRVLLK-EDKKPISFSYTTKRFLM 176
>gi|2415678|emb|CAA04695.1| signal recognition particle subunit [Kluyveromyces lactis]
Length = 181
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISK 73
+ +YP Y + ++T A+GRR PK V+NP K I D + G+ E +K +P++
Sbjct: 2 FQMLYPCYFDTRRTHAQGRRAPKDLCVENPLAKTIADAARSLGIPSIFEGSKTHPQDFGN 61
Query: 74 EHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALI 111
GR RV +K ++G P + +M +G +
Sbjct: 62 P----GRVRVLIK-ENGKPFVSGIDNKRVLMKRIGEYL 94
>gi|448733825|ref|ZP_21716067.1| ribonucleoprotein complex SRP, Srp19 component [Halococcus
salifodinae DSM 8989]
gi|445802345|gb|EMA52652.1| ribonucleoprotein complex SRP, Srp19 component [Halococcus
salifodinae DSM 8989]
Length = 92
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PAY++R+ + +EGRR+ ++ AV PT +I G IE K YPRE
Sbjct: 5 VIWPAYLDRELSRSEGRRVSRSAAVPEPTVDEIARAAGQVGYDVVIEREKTYPREYEP-- 62
Query: 76 FVRGRARVQLKNDDG 90
RGR ++ +D G
Sbjct: 63 --RGRVVIENADDAG 75
>gi|448089154|ref|XP_004196729.1| Piso0_003954 [Millerozyma farinosa CBS 7064]
gi|448093356|ref|XP_004197760.1| Piso0_003954 [Millerozyma farinosa CBS 7064]
gi|359378151|emb|CCE84410.1| Piso0_003954 [Millerozyma farinosa CBS 7064]
gi|359379182|emb|CCE83379.1| Piso0_003954 [Millerozyma farinosa CBS 7064]
Length = 267
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 4 IDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE 63
I ++ ++ + IYP Y ++ ++ EGRR+ ++AV+NP K I D + +E
Sbjct: 76 ISDEEKAQLKSFQVIYPCYFDKNRSHKEGRRVSISRAVENPLAKTISDACQRLNMPIVLE 135
Query: 64 -NKLYPREISKEHFVRGRARVQLKNDD--GSPVNPDFPTREAVM 104
+K +P++ GR R+ +K+ + P +P +P + ++
Sbjct: 136 LDKSHPQDFGNP----GRVRIMMKDPERGFKPTDPGYPNKRFLL 175
>gi|296108841|ref|YP_003615790.1| ribonucleoprotein complex SRP, Srp19 component
[methanocaldococcus infernus ME]
gi|295433655|gb|ADG12826.1| Ribonucleoprotein complex SRP, Srp19 component
[Methanocaldococcus infernus ME]
Length = 86
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI-ENKLYPRE 70
+ I+P YI++ K+ EGR++ K AV NP+ K I+ L L Y I +K YPRE
Sbjct: 1 MIIWPQYIDKNKSRKEGRKVSKEIAVRNPSIKLIEKALKKMNLNYKIYSDKRYPRE 56
>gi|398408255|ref|XP_003855593.1| hypothetical protein MYCGRDRAFT_55177 [Zymoseptoria tritici IPO323]
gi|339475477|gb|EGP90569.1| hypothetical protein MYCGRDRAFT_55177 [Zymoseptoria tritici IPO323]
Length = 255
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 12/90 (13%)
Query: 12 VERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-------N 64
++ + C+YP Y + ++ +GRR+ K AV NP ++I D LS G + +
Sbjct: 57 IKPYQCLYPVYFDSTRSRDQGRRVSKEDAVPNPLAREIVDALSQIGAQNGVALQIVFEPT 116
Query: 65 KLYPREISKEHFVRGRARVQLKNDDGSPVN 94
K +P++ + GR +V +K DG P++
Sbjct: 117 KTHPKDWANP----GRVKVLIKK-DGKPIS 141
>gi|452846149|gb|EME48082.1| hypothetical protein DOTSEDRAFT_123190 [Dothistroma septosporum
NZE10]
Length = 215
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 12/87 (13%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI-------ENKLY 67
+ CIYP Y + ++ GRR+ K AV NP ++I + L+ G + ++ K +
Sbjct: 20 YQCIYPVYFDTTRSREAGRRVKKEDAVQNPLAREIVEALAKIGEQMNVPLQIVLEPTKTH 79
Query: 68 PREISKEHFVRGRARVQLKNDDGSPVN 94
P++ + GR +V +K DGSP++
Sbjct: 80 PKDWANP----GRVKVSIKK-DGSPIS 101
>gi|19173407|ref|NP_597210.1| SIGNAL RECOGNITION PARTICLE (SRP) SEC65 SUBUNIT [Encephalitozoon
cuniculi GB-M1]
gi|52783413|sp|Q8SRC3.1|SEC65_ENCCU RecName: Full=Signal recognition particle SEC65 subunit
gi|19170996|emb|CAD26386.1| SIGNAL RECOGNITION PARTICLE (SRP) SEC65 SUBUNIT [Encephalitozoon
cuniculi GB-M1]
gi|449328896|gb|AGE95172.1| signal recognition particle sec65 subunit [Encephalitozoon
cuniculi]
Length = 137
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 18/135 (13%)
Query: 14 RWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREIS 72
+ C+YP Y++ ++L+EGR+ K V P Y +I + L ++Y E +K +PR+
Sbjct: 4 KHFCLYPIYMDSARSLSEGRKYRKEICVQRPRYHEIKNALEKLEIEYTDEPSKKHPRDF- 62
Query: 73 KEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQRDL 132
F GR R+ K + G R V+ + I +L+S+ G ++ E ++++
Sbjct: 63 ---FNSGRFRI--KKEYG---------RLFVIEGISQTIAELRSKPG--SSEETSREKQS 106
Query: 133 SGGGGGGKKQGLVYL 147
G G Q VY+
Sbjct: 107 RGKAVHGVVQNGVYV 121
>gi|385302653|gb|EIF46776.1| signal recognition particle sec65 subunit [Dekkera bruxellensis
AWRI1499]
Length = 282
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 18 IYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEHF 76
+YP Y + +++ EGRR P K ++NP K + D GL +E +K +P++
Sbjct: 112 LYPCYFDANRSVKEGRRAPIEKCIENPLGKTVLDACKELGLPSMLETDKSHPQDFGNP-- 169
Query: 77 VRGRARVQLKNDDGSPVNPDFPTREAVMLHLG 108
GR RV LK G P P ++ ++ +G
Sbjct: 170 --GRVRVALKY-KGKPTTPKIKSKRQLIYMVG 198
>gi|448575213|ref|ZP_21641661.1| SRP19 protein [Haloferax larsenii JCM 13917]
gi|448590658|ref|ZP_21650423.1| SRP19 protein [Haloferax elongans ATCC BAA-1513]
gi|445731285|gb|ELZ82870.1| SRP19 protein [Haloferax larsenii JCM 13917]
gi|445734154|gb|ELZ85713.1| SRP19 protein [Haloferax elongans ATCC BAA-1513]
Length = 92
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
IYPAY++ + +EGRR+ ++ AV++PT +I + G IE +K Y RE
Sbjct: 5 VIYPAYLDASLSRSEGRRVAESAAVEDPTVDEIAKAVQQVGYDAVIERDKRYSREFET-- 62
Query: 76 FVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGAL 110
R RV + N D + N +AV ++G L
Sbjct: 63 ----RGRVLVNNADDATKN---DIVQAVAAYVGIL 90
>gi|320100337|ref|YP_004175929.1| signal recognition particle subunit SRP19 (srp19)
[Desulfurococcus mucosus DSM 2162]
gi|319752689|gb|ADV64447.1| signal recognition particle, subunit SRP19 (srp19)
[Desulfurococcus mucosus DSM 2162]
Length = 99
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 14 RWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREISK 73
R + +YP+YI+ KK+ EGR+I + AV NP +I + GL E K YPR
Sbjct: 8 RKIVVYPSYIDSKKSRREGRKIRLSDAVPNPGIDEILEACRRLGLNPVHEEKQYPR---- 63
Query: 74 EHFVRGRARVQLK 86
H +RGR V K
Sbjct: 64 IHGLRGRVLVDKK 76
>gi|440632883|gb|ELR02802.1| hypothetical protein GMDG_05739 [Geomyces destructans 20631-21]
Length = 232
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 3 TIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI 62
T D K+ D + C+YP Y ++ ++ AEGRR+ + AV+NP ++I + L+
Sbjct: 76 TTDDAKYRDFQ---CLYPVYFDKNRSRAEGRRVGRELAVENPMAREIVNACGRLRLETLF 132
Query: 63 E-NKLYPREIS 72
E KL+P++ S
Sbjct: 133 EPTKLHPKDWS 143
>gi|448374067|ref|ZP_21557952.1| Signal recognition particle 19 kDa protein [Halovivax asiaticus JCM
14624]
gi|445660744|gb|ELZ13539.1| Signal recognition particle 19 kDa protein [Halovivax asiaticus JCM
14624]
Length = 93
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PAY++ ++T EGRR+P AV PT +I + G +E +K Y RE
Sbjct: 5 VIWPAYLDAERTRREGRRVPHELAVSEPTVDEIAKAVQQVGYDATVERDKTYSREPW--- 61
Query: 76 FVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGAL 110
R R RV ++ + S N +AV ++GA+
Sbjct: 62 --RTRGRVVVRGAEDSTKNDLV---QAVAAYVGAM 91
>gi|298675888|ref|YP_003727638.1| ribonucleoprotein complex SRP, Srp19 component [Methanohalobium
evestigatum Z-7303]
gi|298288876|gb|ADI74842.1| Ribonucleoprotein complex SRP, Srp19 component [Methanohalobium
evestigatum Z-7303]
Length = 99
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI-ENKLYPR 69
+ I+P Y++R +T ++GR I K K+V P K+I+ S GL + E+K YPR
Sbjct: 9 LVIWPVYLDRTRTRSDGRIISKKKSVREPELKEIEKAASKLGLNPEVEEDKAYPR 63
>gi|433638346|ref|YP_007284106.1| signal recognition particle 19 kDa protein [Halovivax ruber XH-70]
gi|433290150|gb|AGB15973.1| signal recognition particle 19 kDa protein [Halovivax ruber XH-70]
Length = 93
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PAY++ ++T EGRR+P AV PT +I + G +E +K Y RE
Sbjct: 5 VIWPAYLDAERTRREGRRVPDELAVSEPTVDEIAKAVQQVGYDATVERDKTYSREPW--- 61
Query: 76 FVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGAL 110
R R RV ++ + S N +AV ++GA+
Sbjct: 62 --RTRGRVVVRGAEDSTKNDLV---QAVAAYVGAM 91
>gi|354545003|emb|CCE41728.1| hypothetical protein CPAR2_802780 [Candida parapsilosis]
Length = 283
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 13 ERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREI 71
E++ IYP Y + ++ EGRR+ +AV+NP I D + + +E +K +P++
Sbjct: 95 EKFQIIYPCYFDLNRSHKEGRRVSIDRAVENPLAITICDACRSLQIPALLELDKTHPQDF 154
Query: 72 SKEHFVRGRARVQLKN--DDGSPVNPDFPTREAV 103
GR RV LK+ +D P++P T+ ++
Sbjct: 155 GNS----GRVRVLLKDFKNDNKPIDPSITTKRSL 184
>gi|223999423|ref|XP_002289384.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974592|gb|EED92921.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 241
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 14 RWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREIS 72
++ IYP Y++ KT GRRI AV PT +DI + L +++ I+ +K Y R+ S
Sbjct: 63 QFSAIYPNYLDSNKTSKLGRRIAAKYAVSEPTIQDIHEGLVALNIRHVIQPHKGYSRDAS 122
Query: 73 KEHFVRGRARVQLK 86
+ GR V L+
Sbjct: 123 SRWYNSGRVLVDLE 136
>gi|85075489|ref|XP_955777.1| hypothetical protein NCU03485 [Neurospora crassa OR74A]
gi|18376075|emb|CAD21103.1| related to signal recognition particle protein Sec65 [Neurospora
crassa]
gi|28916785|gb|EAA26541.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 366
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
C+YP Y + ++ AEGRR+ K AV NP +I + + L +E KL+P++ +
Sbjct: 125 CLYPCYFDATRSRAEGRRVSKELAVPNPLATEIVNACAQLRLSVVLEAGKLHPKDWANP- 183
Query: 76 FVRGRARVQLK 86
GR +V LK
Sbjct: 184 ---GRVKVNLK 191
>gi|345004109|ref|YP_004806962.1| signal recognition particle protein [halophilic archaeon DL31]
gi|344319735|gb|AEN04589.1| Signal recognition particle 19 kDa protein [halophilic archaeon
DL31]
Length = 92
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
+YPAY + + ++GRR+P++ AV+ PT +I + G IE +K Y RE
Sbjct: 5 IVYPAYFDAAYSRSDGRRVPESAAVEEPTLDEIAKAVQQVGYDAVIERDKTYSREFEP-- 62
Query: 76 FVRGRARVQLKND 88
RGR VQ D
Sbjct: 63 --RGRVLVQGAED 73
>gi|227115754|ref|ZP_03829410.1| hypothetical protein PcarbP_22506 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 39
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 5 DTKKHTDVERWVCIYPAYINRKKTLAEGRR 34
D D +R++CIYPAY+N KKT+AEGRR
Sbjct: 10 DEMSPADKDRFICIYPAYLNNKKTIAEGRR 39
>gi|350288811|gb|EGZ70036.1| signal recognition particle, SRP19 subunit [Neurospora tetrasperma
FGSC 2509]
Length = 336
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
C+YP Y + ++ AEGRR+ K AV NP +I + + L +E KL+P++ +
Sbjct: 94 CLYPCYFDATRSRAEGRRVSKELAVPNPLATEIVNACAQLRLSVVLEAGKLHPKDWANP- 152
Query: 76 FVRGRARVQLK 86
GR +V LK
Sbjct: 153 ---GRVKVNLK 160
>gi|336259719|ref|XP_003344659.1| hypothetical protein SMAC_07227 [Sordaria macrospora k-hell]
gi|380088396|emb|CCC13660.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 354
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
C+YP Y + ++ AEGRR+ K AV NP +I + + L +E KL+P++ +
Sbjct: 125 CLYPCYFDATRSRAEGRRVSKELAVANPLATEIVNACAQLRLSVVLEAGKLHPKDWANP- 183
Query: 76 FVRGRARVQLK 86
GR +V LK
Sbjct: 184 ---GRVKVNLK 191
>gi|336468892|gb|EGO57055.1| hypothetical protein NEUTE1DRAFT_84722 [Neurospora tetrasperma FGSC
2508]
Length = 327
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
C+YP Y + ++ AEGRR+ K AV NP +I + + L +E KL+P++ +
Sbjct: 85 CLYPCYFDATRSRAEGRRVSKELAVPNPLATEIVNACAQLRLSVVLEAGKLHPKDWANP- 143
Query: 76 FVRGRARVQLK 86
GR +V LK
Sbjct: 144 ---GRVKVNLK 151
>gi|302916435|ref|XP_003052028.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732967|gb|EEU46315.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 277
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
C+YP Y + ++ AEGRR+ AV +P ++I + S L E K++P++ +
Sbjct: 86 CVYPVYFDASRSRAEGRRVNADLAVKDPLAREIANACSRLRLPTLFEPEKVHPKDWANP- 144
Query: 76 FVRGRARVQLKNDDGSPV 93
GR +V LK G PV
Sbjct: 145 ---GRVKVGLKKTPGHPV 159
>gi|347524518|ref|YP_004782088.1| ribonucleoprotein complex SRP, Srp19 component [Pyrolobus fumarii
1A]
gi|343461400|gb|AEM39836.1| Ribonucleoprotein complex SRP, Srp19 component [Pyrolobus fumarii
1A]
Length = 103
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPR 69
V ++P+YI+ K+ +GR+IP+ AV P ++I + GL +E YPR
Sbjct: 10 VVVWPSYIDASKSRGQGRKIPRKDAVPRPRVEEIVEAAERLGLNPEVEEARYPR 63
>gi|260950429|ref|XP_002619511.1| hypothetical protein CLUG_00670 [Clavispora lusitaniae ATCC 42720]
gi|238847083|gb|EEQ36547.1| hypothetical protein CLUG_00670 [Clavispora lusitaniae ATCC 42720]
Length = 262
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 2 ATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYH 61
+ ++ ++ R+ IYP Y + ++ EGRR+ AV NP K I D +
Sbjct: 71 SKFSAQEREEIRRFQVIYPCYFDVNRSHKEGRRVSTQDAVRNPLAKTISDACRQLRIPVL 130
Query: 62 IE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLG 108
+E +K +P++ GR RV +K ++G N FP + A++L +
Sbjct: 131 LELDKSHPQDYGNP----GRVRVLVK-ENGVAGNSRFPNKRALLLEIS 173
>gi|448541408|ref|ZP_21624183.1| SRP19 protein [Haloferax sp. ATCC BAA-646]
gi|448549737|ref|ZP_21628342.1| SRP19 protein [Haloferax sp. ATCC BAA-645]
gi|448555152|ref|ZP_21631192.1| SRP19 protein [Haloferax sp. ATCC BAA-644]
gi|445708008|gb|ELZ59852.1| SRP19 protein [Haloferax sp. ATCC BAA-646]
gi|445712785|gb|ELZ64566.1| SRP19 protein [Haloferax sp. ATCC BAA-645]
gi|445717897|gb|ELZ69600.1| SRP19 protein [Haloferax sp. ATCC BAA-644]
Length = 92
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
IYPAY++ + +EGRR+ ++ AV+ PT +I + G IE +K Y RE
Sbjct: 5 VIYPAYLDASLSRSEGRRVARSAAVEAPTVDEIAKAVQQVGYDAVIERDKRYSREFET-- 62
Query: 76 FVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGAL 110
R RV + N D + N +AV ++G L
Sbjct: 63 ----RGRVLVNNADDATKN---DIVQAVAAYVGIL 90
>gi|374635904|ref|ZP_09707492.1| Ribonucleoprotein complex SRP, Srp19 component [Methanotorris
formicicus Mc-S-70]
gi|373560787|gb|EHP87040.1| Ribonucleoprotein complex SRP, Srp19 component [Methanotorris
formicicus Mc-S-70]
Length = 85
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 18 IYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI-ENKLYPRE 70
I+P YI++ K+ EGR++PK A++NP KDI+ L G + +K +P+E
Sbjct: 3 IWPNYIDKNKSRKEGRKVPKDIAIENPKLKDIEMALKKMGYNAKVYRDKCHPKE 56
>gi|150400443|ref|YP_001324209.1| ribonucleoprotein complex SRP, Srp19 component [Methanococcus
aeolicus Nankai-3]
gi|171460845|sp|A6USX5.1|SRP19_META3 RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|150013146|gb|ABR55597.1| Ribonucleoprotein complex SRP, Srp19 component [Methanococcus
aeolicus Nankai-3]
Length = 90
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI-ENKLYPREISKE 74
+ I+ AY++ +K+ EGR+IPK V+NP KDI + L G I +NK +P+E +
Sbjct: 4 IIIWSAYLDAEKSRKEGRKIPKELCVNNPKIKDIYNSLRKLGYNAEIVKNKCHPKEWWE- 62
Query: 75 HFVRGRARVQLKNDD 89
+ G +V++ NDD
Sbjct: 63 --IVGYIKVKV-NDD 74
>gi|448392984|ref|ZP_21567529.1| ribonucleoprotein complex SRP, Srp19 component [Haloterrigena
salina JCM 13891]
gi|445663982|gb|ELZ16705.1| ribonucleoprotein complex SRP, Srp19 component [Haloterrigena
salina JCM 13891]
Length = 93
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PAY++ +T +EGRR+ + AV+ PT +I + G IE +K Y S+EH
Sbjct: 5 VIWPAYLDANRTRSEGRRVSQDLAVEEPTVDEIAKAVQQIGYDATIERDKAY----SREH 60
Query: 76 FVRGRARVQLKNDDGSPVN 94
+ R RV ++ D S N
Sbjct: 61 WA-DRGRVVVRGADDSTKN 78
>gi|292655267|ref|YP_003535164.1| SRP19 protein [Haloferax volcanii DS2]
gi|433430619|ref|ZP_20407515.1| SRP19 protein [Haloferax sp. BAB2207]
gi|448292161|ref|ZP_21482835.1| SRP19 protein [Haloferax volcanii DS2]
gi|448571737|ref|ZP_21639911.1| SRP19 protein [Haloferax lucentense DSM 14919]
gi|448596645|ref|ZP_21653783.1| SRP19 protein [Haloferax alexandrinus JCM 10717]
gi|23320899|gb|AAN15926.1| signal recognition particle component SRP19 [synthetic construct]
gi|291372866|gb|ADE05093.1| SRP19 protein [Haloferax volcanii DS2]
gi|432194410|gb|ELK51036.1| SRP19 protein [Haloferax sp. BAB2207]
gi|445573680|gb|ELY28201.1| SRP19 protein [Haloferax volcanii DS2]
gi|445721704|gb|ELZ73370.1| SRP19 protein [Haloferax lucentense DSM 14919]
gi|445740526|gb|ELZ92031.1| SRP19 protein [Haloferax alexandrinus JCM 10717]
Length = 92
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
IYPAY++ + +EGRR+ ++ AV+ PT +I + G IE +K Y RE
Sbjct: 5 VIYPAYLDASLSRSEGRRVAQSAAVEAPTVDEIAKAVQQVGYDAVIERDKRYSREFET-- 62
Query: 76 FVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGAL 110
R RV + N D + N +AV ++G L
Sbjct: 63 ----RGRVLVNNADDATKN---DIVQAVAAYVGIL 90
>gi|448602666|ref|ZP_21656601.1| SRP19 protein [Haloferax sulfurifontis ATCC BAA-897]
gi|445747018|gb|ELZ98475.1| SRP19 protein [Haloferax sulfurifontis ATCC BAA-897]
Length = 92
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN-KLYPREISKEH 75
IYPAY++ + +EGRR+ ++ AV+ PT +I + G IE K Y RE
Sbjct: 5 VIYPAYLDASLSRSEGRRVAQSAAVEEPTVDEIAKAVQQVGYDAVIERGKRYSREFET-- 62
Query: 76 FVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGAL 110
R RV + N D + N +AV ++G L
Sbjct: 63 ----RGRVLVNNADDATKN---DIVQAVAAYVGIL 90
>gi|384245924|gb|EIE19416.1| hypothetical protein COCSUDRAFT_58702 [Coccomyxa subellipsoidea
C-169]
Length = 100
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 72 SKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPK 113
S++ +RGRARV+L ND G+P+NP P R + + L P+
Sbjct: 16 SRDFLMRGRARVKLFNDSGAPINPAIPNRRLLYERVAELCPR 57
>gi|448310191|ref|ZP_21500037.1| Signal recognition particle 19 kDa protein [Natronolimnobius
innermongolicus JCM 12255]
gi|445608352|gb|ELY62203.1| Signal recognition particle 19 kDa protein [Natronolimnobius
innermongolicus JCM 12255]
Length = 92
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PAY++ +T +EGRR+ + AV+ PT +I + G IE +K Y S+EH
Sbjct: 5 VIWPAYLDANRTRSEGRRVAQDLAVEEPTVDEIAKAVQQIGYDATIERDKAY----SREH 60
Query: 76 FVRGRARVQLKNDDGS 91
+ R RV ++ D S
Sbjct: 61 WA-DRGRVVVRGSDDS 75
>gi|150865516|ref|XP_001384766.2| signal recognition particle subunit [Scheffersomyces stipitis CBS
6054]
gi|149386772|gb|ABN66737.2| signal recognition particle subunit [Scheffersomyces stipitis CBS
6054]
Length = 276
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 12 VERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPRE 70
++ + IYP Y + ++ EGRR+ +KAV+NP K + D + L +E +K +P++
Sbjct: 90 LKNFQIIYPCYFDLNRSHKEGRRVAVSKAVENPLAKTVSDACRSFNLPVLLELDKTHPQD 149
Query: 71 ISKEHFVRGRARVQLKN 87
GR RV LK+
Sbjct: 150 FGNP----GRVRVLLKD 162
>gi|448625016|ref|ZP_21670783.1| SRP19 protein [Haloferax denitrificans ATCC 35960]
gi|445748778|gb|EMA00224.1| SRP19 protein [Haloferax denitrificans ATCC 35960]
Length = 92
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN-KLYPREISKEH 75
IYPAY++ + +EGRR+ ++ AV+ PT +I + G IE K Y RE
Sbjct: 5 VIYPAYLDASLSRSEGRRVAQSAAVEEPTVDEIAKAVQQVGYDAVIERGKRYSREFDT-- 62
Query: 76 FVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGAL 110
R RV + N D + N +AV ++G L
Sbjct: 63 ----RGRVLVNNADDATKN---DIVQAVAAYVGIL 90
>gi|448586251|ref|ZP_21648325.1| SRP19 protein [Haloferax gibbonsii ATCC 33959]
gi|445724906|gb|ELZ76532.1| SRP19 protein [Haloferax gibbonsii ATCC 33959]
Length = 92
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
IYPAY++ + +EGRR+ ++ AV+ PT +I + G IE +K Y RE
Sbjct: 5 VIYPAYLDAALSRSEGRRVAQSAAVEAPTVDEIAKAVQQVGYDAVIERDKRYSREFET-- 62
Query: 76 FVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGAL 110
R RV + N D + N +AV ++G L
Sbjct: 63 ----RGRVLVNNADDATKN---DIVQAVAAYVGIL 90
>gi|171689884|ref|XP_001909881.1| hypothetical protein [Podospora anserina S mat+]
gi|170944904|emb|CAP71015.1| unnamed protein product [Podospora anserina S mat+]
Length = 342
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 6 TKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-N 64
T T ++C+YP Y + T A+GRR+ A AV NP +I + + E
Sbjct: 106 TTDATPYASYLCLYPIYFSSLHTRAQGRRVSAAAAVPNPLATEILAACANLNIPTVFEAG 165
Query: 65 KLYPREISKEHFVRGRARVQLKN 87
KL+P++ + GR +V L N
Sbjct: 166 KLHPKDWANP----GRVKVSLAN 184
>gi|71419554|ref|XP_811205.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70875842|gb|EAN89354.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 152
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLK-YHIENKL-YPR-EI 71
+ I+P Y++ T AEGRR+ K ++V+NP ++I VL G K + IE L PR +
Sbjct: 13 YQTIFPQYLDANLTPAEGRRLTKTQSVENPQLEEIAIVLGQLGYKDFFIERTLSLPRSQA 72
Query: 72 SKEHFV--RGRARVQLK 86
SK++ + +G RV +K
Sbjct: 73 SKKYAIVPKGCVRVAIK 89
>gi|366989597|ref|XP_003674566.1| hypothetical protein NCAS_0B01060 [Naumovozyma castellii CBS 4309]
gi|342300430|emb|CCC68190.1| hypothetical protein NCAS_0B01060 [Naumovozyma castellii CBS 4309]
Length = 266
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 6 TKKHTD-VERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE- 63
TK+ D ++ + IYP Y ++ ++ EGRR+PK AV+NP K + D GL +
Sbjct: 80 TKQDIDKMKTFQIIYPCYFDKNRSHKEGRRVPKELAVENPLAKTLSDAAGRLGLVCLFQA 139
Query: 64 NKLYPREISKEHFVRGRARVQLKND 88
K +P++ GR +V LK +
Sbjct: 140 EKTHPQDFGNP----GRIKVLLKQN 160
>gi|320592199|gb|EFX04638.1| signal recognition particle [Grosmannia clavigera kw1407]
Length = 306
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISK 73
+ +YP Y + ++ AEGRR+ +A AV NP ++I + GL+ E K +P++ +
Sbjct: 85 FAALYPVYFDSARSRAEGRRVGRALAVANPLAREIVTACANLGLRTVFEPTKTHPKDWAN 144
Query: 74 EHFVRGRARVQLKN 87
GR RV L +
Sbjct: 145 P----GRVRVDLAS 154
>gi|116200069|ref|XP_001225846.1| hypothetical protein CHGG_08190 [Chaetomium globosum CBS 148.51]
gi|88179469|gb|EAQ86937.1| hypothetical protein CHGG_08190 [Chaetomium globosum CBS 148.51]
Length = 289
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
C+YP Y + +T AEGRR+ ++ AV NP DI + L+ +E K++P++ +
Sbjct: 81 CLYPVYFDATRTRAEGRRVSRSLAVANPLAIDIVQACAGLRLQTVLEAGKIHPKDWANP- 139
Query: 76 FVRGRARVQLK 86
GR +V L+
Sbjct: 140 ---GRVKVNLR 147
>gi|71667351|ref|XP_820626.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70885977|gb|EAN98775.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 152
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLK-YHIENKL-YPR-EI 71
+ I+P Y++ T AEGRR+ K ++V+NP ++I VL G K + IE L PR +
Sbjct: 13 YQTIFPQYLDANLTPAEGRRLTKTQSVENPQLEEIAVVLGQLGYKDFFIERTLSLPRSQA 72
Query: 72 SKEHFV--RGRARVQLK 86
SK++ + +G RV +K
Sbjct: 73 SKKYAIVPKGCVRVAIK 89
>gi|448561696|ref|ZP_21634904.1| SRP19 protein [Haloferax prahovense DSM 18310]
gi|445720324|gb|ELZ71999.1| SRP19 protein [Haloferax prahovense DSM 18310]
Length = 92
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
IYPAY++ + +EGRR+ ++ AV+ PT +I + G IE +K Y RE
Sbjct: 5 VIYPAYLDAALSRSEGRRVAQSAAVEAPTVDEIAKAVQQVGYDAVIERDKRYSREFDT-- 62
Query: 76 FVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGAL 110
R RV + N D + N +AV ++G L
Sbjct: 63 ----RGRVLVNNADDATKN---DIVQAVAAYVGIL 90
>gi|452986524|gb|EME86280.1| hypothetical protein MYCFIDRAFT_101426, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 204
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREISKE 74
+ CIYP Y + ++ EGRR+ K AV NP ++I D L+ Y ++ ++ E +K
Sbjct: 7 YQCIYPVYFDSTRSREEGRRVGKDDAVPNPLAREIADALAYIASTYGVDLRIV-LEPTKT 65
Query: 75 H----FVRGRARVQLKND 88
H GR + LK D
Sbjct: 66 HPKDWANPGRVKALLKRD 83
>gi|406866499|gb|EKD19539.1| signal recognition particle protein Sec65 [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 288
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
C+YP Y + ++ EGR + K AV NP ++I + S GL+ E K++P++ +
Sbjct: 85 CVYPVYFDASRSRKEGRMVGKELAVANPLAREIVNACSRLGLETLFEPTKIHPKDWANP- 143
Query: 76 FVRGRARVQLK 86
GR +++LK
Sbjct: 144 ---GRVKIKLK 151
>gi|219114911|ref|XP_002178251.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409986|gb|EEC49916.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 210
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 18 IYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN-KLYPREISKEHF 76
IYP+Y++ K++ EGRR+ ++ PT D+ + L + +++ I+ K Y R+IS +
Sbjct: 67 IYPSYVDSNKSVKEGRRVSLKNSIPCPTVMDLSEALQSMQVRHVIQPYKGYSRDISCQWE 126
Query: 77 VRGRARVQLKN 87
GR V + N
Sbjct: 127 NPGRIMVDVTN 137
>gi|389846580|ref|YP_006348819.1| signal recognition particle 19 kDa protein [Haloferax
mediterranei ATCC 33500]
gi|448615747|ref|ZP_21664510.1| signal recognition particle 19 kDa protein [Haloferax
mediterranei ATCC 33500]
gi|388243886|gb|AFK18832.1| signal recognition particle 19 kDa protein [Haloferax
mediterranei ATCC 33500]
gi|445751878|gb|EMA03309.1| signal recognition particle 19 kDa protein [Haloferax
mediterranei ATCC 33500]
Length = 92
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
IYPAY++ + +EGRR+ K+ AV++PT ++ + G IE +K Y RE
Sbjct: 5 VIYPAYLDASLSRSEGRRVSKSAAVEDPTVDEVAKAVQQVGYDAVIERDKQYSREFEP-- 62
Query: 76 FVRGRARVQLKNDDGSPVN 94
R RV + N D + N
Sbjct: 63 ----RGRVLVNNADDATKN 77
>gi|189208981|ref|XP_001940823.1| signal recognition particle sec65 subunit [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187976916|gb|EDU43542.1| signal recognition particle sec65 subunit [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 244
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 7 KKHTDVER---WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE 63
K TD E+ + C+YP Y + +T AEGRR+ K AV+NP +++ D + GL E
Sbjct: 53 KTSTDREKSKHYQCLYPVYFDISRTRAEGRRVGKELAVENPLAREMADAAADLGLATVFE 112
Query: 64 -NKLYPREISKEHFVRGRARVQLKND 88
+K +P++ S GR RV LK++
Sbjct: 113 PDKTHPQDWSNP----GRVRVLLKHE 134
>gi|296241892|ref|YP_003649379.1| signal recognition particle subunit SRP19 (srp19) [Thermosphaera
aggregans DSM 11486]
gi|296094476|gb|ADG90427.1| signal recognition particle, subunit SRP19 (srp19) [Thermosphaera
aggregans DSM 11486]
Length = 99
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN-KLYPREISKE 74
+ +YP+YI+ + EGRRIP A AV +P+ ++I + GL +EN K YP +
Sbjct: 10 IVLYPSYIDSTFSRGEGRRIPSALAVPSPSIEEIYNAAVKLGLNPVVENDKAYP----GK 65
Query: 75 HFVRGRARVQLK 86
+V+GR V K
Sbjct: 66 WWVKGRVVVDKK 77
>gi|255712249|ref|XP_002552407.1| KLTH0C04180p [Lachancea thermotolerans]
gi|238933786|emb|CAR21969.1| KLTH0C04180p [Lachancea thermotolerans CBS 6340]
Length = 255
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 12 VERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPRE 70
++++ +YP Y ++ ++ +GRR+P AV+NP + + D +S + +E +K +P++
Sbjct: 78 LKKFQILYPCYFDKNRSHKQGRRVPAQYAVENPLVQTLADAVSKLKVPCVLEADKCHPQD 137
Query: 71 ISKEHFVRGRARVQLKNDDGSPVNPD-FPTREAVMLHLGALI 111
GR R+ LK D+G P F + +M +G +
Sbjct: 138 FGNP----GRVRLFLK-DEGQSTTPSLFQNKRMLMKLVGKFM 174
>gi|448613059|ref|ZP_21662939.1| SRP19 protein [Haloferax mucosum ATCC BAA-1512]
gi|445739956|gb|ELZ91462.1| SRP19 protein [Haloferax mucosum ATCC BAA-1512]
Length = 92
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
IYPAY++ + +EGRR+ ++ AV++PT ++ + G IE +K Y RE
Sbjct: 5 VIYPAYLDASLSRSEGRRVSQSAAVEDPTVDEVAKAVQQVGYDAVIERDKRYSREFET-- 62
Query: 76 FVRGRARVQLKNDDGSPVN 94
R RV + N D + N
Sbjct: 63 ----RGRVLVNNADDATKN 77
>gi|321262945|ref|XP_003196191.1| signal recognition particle protein [Cryptococcus gattii WM276]
gi|317462666|gb|ADV24404.1| signal recognition particle protein, putative [Cryptococcus gattii
WM276]
Length = 356
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISK 73
W +YP Y + K ++ GRR+P+ AV P I + + GL +E ++ +P +
Sbjct: 142 WNVVYPLYFDAKVSINSGRRVPRTSAVWWPIATQIVEACKSFGLPSVLEPDRCHPADWGN 201
Query: 74 EHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALI 111
GR +VQL DG +NP R + H+ I
Sbjct: 202 P----GRVKVQLVK-DGRFINPIIKNRTQLYKHISDQI 234
>gi|45190892|ref|NP_985146.1| AER289Wp [Ashbya gossypii ATCC 10895]
gi|52783376|sp|Q756H7.1|SEC65_ASHGO RecName: Full=Signal recognition particle SEC65 subunit
gi|44983934|gb|AAS52970.1| AER289Wp [Ashbya gossypii ATCC 10895]
gi|374108371|gb|AEY97278.1| FAER289Wp [Ashbya gossypii FDAG1]
Length = 261
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 10 TDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYP 68
D++R+ +YP Y ++ +T A+GR++P AV NP K I D + E K +P
Sbjct: 85 ADLKRFQILYPCYFDKNRTHAQGRQVPLELAVANPLAKTIADACRELEVLCVFEGEKTHP 144
Query: 69 REISKEHFVRGRARVQLKND 88
++ GR RV LK +
Sbjct: 145 QDFGNP----GRVRVLLKEN 160
>gi|435847058|ref|YP_007309308.1| signal recognition particle 19 kDa protein [Natronococcus
occultus SP4]
gi|433673326|gb|AGB37518.1| signal recognition particle 19 kDa protein [Natronococcus
occultus SP4]
Length = 92
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREISKEHF 76
I+PAY++ + + AEGRR+ + AV+ PT +I + G IE + + S+EH+
Sbjct: 5 VIWPAYLDAELSRAEGRRVAEELAVEEPTVDEIAKAVQQIGYDATIERE---KSYSREHW 61
Query: 77 VRGRARVQLKNDDGS 91
R RV ++ D S
Sbjct: 62 A-DRGRVVVRGSDDS 75
>gi|448336556|ref|ZP_21525653.1| Signal recognition particle 19 kDa protein [Natrinema pallidum
DSM 3751]
gi|448345393|ref|ZP_21534290.1| Signal recognition particle 19 kDa protein [Natrinema altunense
JCM 12890]
gi|445628878|gb|ELY82177.1| Signal recognition particle 19 kDa protein [Natrinema pallidum
DSM 3751]
gi|445635391|gb|ELY88561.1| Signal recognition particle 19 kDa protein [Natrinema altunense
JCM 12890]
Length = 93
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PAY++ + AEGRR+ + AV+ PT +I + G IE +K Y S+EH
Sbjct: 5 VIWPAYLDASLSRAEGRRVSQDLAVEEPTVDEIAKAVQQIGYDATIERDKAY----SREH 60
Query: 76 FVRGRARVQLKNDDGSPVN 94
+ R RV ++ D S N
Sbjct: 61 WAE-RGRVVVRGADDSTKN 78
>gi|303390278|ref|XP_003073370.1| signal recognition particle Srp19 [Encephalitozoon intestinalis
ATCC 50506]
gi|303302516|gb|ADM12010.1| signal recognition particle Srp19 [Encephalitozoon intestinalis
ATCC 50506]
Length = 137
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 14 RWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKL--YPREI 71
++ C+YPAY++ + L+EGR+ K ++ P Y +I + L ++ +E L +PR+
Sbjct: 4 KYFCLYPAYMDSSRALSEGRKYRKEICIEKPRYHEIKNALEKLEIEC-VEEPLKKHPRDF 62
Query: 72 SKEHFVRGRARVQ 84
F GR R++
Sbjct: 63 ----FNNGRFRIK 71
>gi|367009820|ref|XP_003679411.1| hypothetical protein TDEL_0B00710 [Torulaspora delbrueckii]
gi|359747069|emb|CCE90200.1| hypothetical protein TDEL_0B00710 [Torulaspora delbrueckii]
Length = 261
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 2 ATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYH 61
A I ++ +V+ + +YP Y +R+++ GRR+ + + V+NP K + D + GL
Sbjct: 72 AQISKEELDEVKGFQVLYPCYFDRRRSHKNGRRVTRDEGVENPLAKTLADAVRNLGLLCI 131
Query: 62 IE-NKLYPREISKEHFVRGRARVQLKND 88
E K +P++ GR R+ LK +
Sbjct: 132 FEGEKTHPQDFGNP----GRVRILLKEN 155
>gi|149246435|ref|XP_001527684.1| signal recognition particle SEC65 subunit [Lodderomyces
elongisporus NRRL YB-4239]
gi|146447638|gb|EDK42026.1| signal recognition particle SEC65 subunit [Lodderomyces
elongisporus NRRL YB-4239]
Length = 280
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 4 IDTKKHTDVE-----RWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGL 58
ID K T E ++ IYP Y + +T +GRR+ +AV+NP K I D +
Sbjct: 78 IDPKSFTAEEEEHFKKFQVIYPCYFDINRTHKQGRRVSIDRAVENPLAKTISDACRYLNI 137
Query: 59 KYHIE-NKLYPREISKEHFVRGRARVQLKNDD-GSPVNPDFPTREAVM 104
+E +K +P++ GR R+ L++ G P++ F +++ M
Sbjct: 138 PVLLELDKTHPQDFGNP----GRVRILLRDPSGGKPIDSRFGNKKSFM 181
>gi|386001656|ref|YP_005919955.1| signal recognition particle protein [Methanosaeta harundinacea 6Ac]
gi|357209712|gb|AET64332.1| Signal recognition particle 19 kDa protein [Methanosaeta
harundinacea 6Ac]
Length = 95
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 14 RWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREIS 72
RWV I+PAYI+ ++ +GR + + AV+ PT +I GL+ E +K YP+E
Sbjct: 7 RWV-IWPAYIDAGRSRGQGRAVSRRDAVEEPTVDEILVAALEMGLQAEAERDKHYPKEWW 65
Query: 73 KEHFVRGRARVQLKNDDGSPVNPDFPTR 100
++ GR RVQ K + V + TR
Sbjct: 66 EKS---GRVRVQKKGPKAALVR-EIATR 89
>gi|335433592|ref|ZP_08558412.1| Ribonucleoprotein complex SRP, Srp19 component [Halorhabdus
tiamatea SARL4B]
gi|334898598|gb|EGM36702.1| Ribonucleoprotein complex SRP, Srp19 component [Halorhabdus
tiamatea SARL4B]
Length = 92
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREISKEHF 76
I+PA ++ + T +EGRR+P+ AV+ PT +I + G IE + + S+E+
Sbjct: 5 VIWPAALDAELTRSEGRRVPQDLAVEEPTVDEIAQAVQQVGYDAVIERE---KTYSREYE 61
Query: 77 VRGRARVQLKND 88
RGR V+ +D
Sbjct: 62 ARGRVLVKDADD 73
>gi|448318170|ref|ZP_21507699.1| Signal recognition particle 19 kDa protein [Natronococcus
jeotgali DSM 18795]
gi|445599824|gb|ELY53847.1| Signal recognition particle 19 kDa protein [Natronococcus
jeotgali DSM 18795]
Length = 92
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREISKEHF 76
I+PAY++ + + AEGRR+ + AV+ PT +I + G IE + + S+EH+
Sbjct: 5 VIWPAYLDAELSRAEGRRVAEDLAVEEPTVDEIAKAVQQIGYDATIERE---KSYSREHW 61
Query: 77 VRGRARVQLKNDDGS 91
R RV ++ D S
Sbjct: 62 A-DRGRVVVRGSDDS 75
>gi|405122653|gb|AFR97419.1| signal recognition particle protein [Cryptococcus neoformans var.
grubii H99]
Length = 355
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISK 73
W +YP Y + K ++ GRR+P+ AV P I + + GL +E ++ +P +
Sbjct: 142 WNVVYPLYFDAKVSINSGRRVPRTSAVWWPIATQIAEACKSLGLPSVLEPDRCHPADWEN 201
Query: 74 EHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALI 111
GR +VQ DG +NP R + H+ I
Sbjct: 202 P----GRVKVQFVK-DGRFINPIIKNRTQLYKHISDQI 234
>gi|154336086|ref|XP_001564279.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061313|emb|CAM38338.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 156
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN--KLYP 68
D + + IYP Y++ T +EGRR+ K++ V++PT +I L G K I + + YP
Sbjct: 7 DKKAYQTIYPQYLDSNLTPSEGRRLTKSQGVEHPTIDEILHALRVLGYKDVIVDPARSYP 66
Query: 69 REISKEHF---VRGRARVQLKN--DDGSPVNPDFPT--REAVM 104
R S F RG RV +K D+ DF T R AVM
Sbjct: 67 RSQSTAKFPVVPRGCIRVSIKTPVDEHYIKKSDFDTQQRSAVM 109
>gi|433591526|ref|YP_007281022.1| signal recognition particle 19 kDa protein [Natrinema pellirubrum
DSM 15624]
gi|448333254|ref|ZP_21522465.1| Signal recognition particle 19 kDa protein [Natrinema pellirubrum
DSM 15624]
gi|448381768|ref|ZP_21561744.1| Signal recognition particle 19 kDa protein [Haloterrigena
thermotolerans DSM 11522]
gi|433306306|gb|AGB32118.1| signal recognition particle 19 kDa protein [Natrinema pellirubrum
DSM 15624]
gi|445623592|gb|ELY76997.1| Signal recognition particle 19 kDa protein [Natrinema pellirubrum
DSM 15624]
gi|445662849|gb|ELZ15612.1| Signal recognition particle 19 kDa protein [Haloterrigena
thermotolerans DSM 11522]
Length = 93
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PAY++ + AEGRR+ + AV+ PT +I + G IE +K Y S+EH
Sbjct: 5 VIWPAYLDAALSRAEGRRVAEDLAVEEPTVDEIAKAVQQIGYDATIERDKAY----SREH 60
Query: 76 FVRGRARVQLKNDDGSPVN 94
+ R RV ++ D S N
Sbjct: 61 WA-DRGRVVVRGADDSTKN 78
>gi|448640869|ref|ZP_21677656.1| signal recognition particle 19 kDa protein [Haloarcula
sinaiiensis ATCC 33800]
gi|448651221|ref|ZP_21680290.1| signal recognition particle 19 kDa protein [Haloarcula
californiae ATCC 33799]
gi|158563910|sp|Q5V5S9.2|SRP19_HALMA RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|445761394|gb|EMA12642.1| signal recognition particle 19 kDa protein [Haloarcula
sinaiiensis ATCC 33800]
gi|445770748|gb|EMA21806.1| signal recognition particle 19 kDa protein [Haloarcula
californiae ATCC 33799]
Length = 92
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PA ++ ++ ++GRR+ AV+NPT +I + G IE +K YPRE
Sbjct: 5 VIWPAALDANRSRSDGRRVSLDLAVENPTVDEIAKAVQQVGYDAVIERDKTYPREYE--- 61
Query: 76 FVRGRARVQLKNDDGS 91
GR RV +K+ D +
Sbjct: 62 ---GRGRVVVKDADDA 74
>gi|55376979|ref|YP_134829.1| signal recognition particle 19 kDa protein [Haloarcula
marismortui ATCC 43049]
gi|55229704|gb|AAV45123.1| signal recognition particle 19 kDa protein [Haloarcula
marismortui ATCC 43049]
Length = 112
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PA ++ ++ ++GRR+ AV+NPT +I + G IE +K YPRE
Sbjct: 25 VIWPAALDANRSRSDGRRVSLDLAVENPTVDEIAKAVQQVGYDAVIERDKTYPREYE--- 81
Query: 76 FVRGRARVQLKNDDGS 91
GR RV +K+ D +
Sbjct: 82 ---GRGRVVVKDADDA 94
>gi|448321040|ref|ZP_21510521.1| Signal recognition particle 19 kDa protein [Natronococcus
amylolyticus DSM 10524]
gi|445604440|gb|ELY58388.1| Signal recognition particle 19 kDa protein [Natronococcus
amylolyticus DSM 10524]
Length = 92
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREISKEHF 76
I+PAY++ + AEGRR+ + AV+ PT +I + G IE + + S+EH+
Sbjct: 5 VIWPAYLDADLSRAEGRRVAEELAVEEPTVDEIAKAVQQIGYDATIERE---KSYSREHW 61
Query: 77 VRGRARVQLKNDDGS 91
R RV ++ D S
Sbjct: 62 A-DRGRVVVRGSDDS 75
>gi|448328540|ref|ZP_21517851.1| Signal recognition particle 19 kDa protein [Natrinema versiforme
JCM 10478]
gi|445615721|gb|ELY69362.1| Signal recognition particle 19 kDa protein [Natrinema versiforme
JCM 10478]
Length = 93
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PAY++ + AEGRR+ + AV+ PT +I + G IE +K Y S+EH
Sbjct: 5 VIWPAYLDAALSRAEGRRVSEDLAVEEPTVDEIAKAVQQIGYDATIERDKAY----SREH 60
Query: 76 FVRGRARVQLKNDDGSPVN 94
+ R RV ++ D S N
Sbjct: 61 WA-DRGRVVVRGADDSTKN 78
>gi|341038984|gb|EGS23976.1| putative signal recognition particle protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 296
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 12/112 (10%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MAT T + +R+ C+YP Y + ++ AEGRR+P AV NP +I + L
Sbjct: 72 MAT--TTDESAYKRFQCLYPVYFDATRSRAEGRRVPAHLAVKNPLATEIVAACANLRLTT 129
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALI 111
+E K +P++ + GR +V L + + P+ P + HL L+
Sbjct: 130 VLEVGKQHPKDWANP----GRVKVDLAS-----LPPNAPVKIKNKHHLYLLV 172
>gi|448529944|ref|ZP_21620677.1| ribonucleoprotein complex SRP, Srp19 component [Halorubrum
hochstenium ATCC 700873]
gi|445708069|gb|ELZ59912.1| ribonucleoprotein complex SRP, Srp19 component [Halorubrum
hochstenium ATCC 700873]
Length = 92
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREI 71
+YPAY + + + +EGRR+P AV+ PT +I + G +E + YPRE
Sbjct: 5 VVYPAYFDAELSRSEGRRVPTDLAVEAPTVDEIAKAVQQVGYDAAVERDATYPREF 60
>gi|367000637|ref|XP_003685054.1| hypothetical protein TPHA_0C04700 [Tetrapisispora phaffii CBS 4417]
gi|357523351|emb|CCE62620.1| hypothetical protein TPHA_0C04700 [Tetrapisispora phaffii CBS 4417]
Length = 270
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 2 ATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYH 61
A + ++ +V+ + IYP Y + ++ EGRR+ K AV+NP K + D + G+
Sbjct: 77 ARMSKQELQEVKGFQVIYPCYFDVNRSHKEGRRVSKELAVENPLAKTVADAVRELGVLCI 136
Query: 62 IE-NKLYPREISKEHFVRGRARVQLK 86
E +K +P++ GR RV +K
Sbjct: 137 FEGDKCHPQDFGNP----GRVRVLIK 158
>gi|401827336|ref|XP_003887760.1| signal recognition particle protein Srp19 [Encephalitozoon hellem
ATCC 50504]
gi|392998767|gb|AFM98779.1| signal recognition particle protein Srp19 [Encephalitozoon hellem
ATCC 50504]
Length = 137
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 11/74 (14%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREISKE 74
+ C+YP Y++ K+L+EGR+ K V P Y +I + L + Y E SK+
Sbjct: 5 YFCLYPIYMDSTKSLSEGRKYRKEICVQKPRYHEIKNALEKLEIG-------YVDEASKK 57
Query: 75 H----FVRGRARVQ 84
H F GR R++
Sbjct: 58 HPGDFFNSGRFRIK 71
>gi|320582010|gb|EFW96229.1| Subunit of the signal recognition particle (SRP) [Ogataea
parapolymorpha DL-1]
Length = 255
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 18 IYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEHF 76
IYP Y + +++ EGRR+P V+NP K I D L +E K +P++
Sbjct: 86 IYPCYFDLNRSVKEGRRVPLDHCVENPLAKTILDACRHLNLTAVLEPEKSHPQDFGNP-- 143
Query: 77 VRGRARVQLKNDDGSPVNPDFPTREAVMLHLG 108
GR RV LK G V+P T+ ++L +
Sbjct: 144 --GRVRVGLKF-KGQQVSPAIRTKRGLLLKIS 172
>gi|313127033|ref|YP_004037303.1| signal recognition particle subunit srp19 (srp19) [Halogeometricum
borinquense DSM 11551]
gi|448288500|ref|ZP_21479698.1| signal recognition particle, subunit srp19 (srp19) [Halogeometricum
borinquense DSM 11551]
gi|312293398|gb|ADQ67858.1| signal recognition particle, subunit SRP19 (srp19) [Halogeometricum
borinquense DSM 11551]
gi|445568885|gb|ELY23460.1| signal recognition particle, subunit srp19 (srp19) [Halogeometricum
borinquense DSM 11551]
Length = 93
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKL-YPREISKEH 75
I+P Y++ +K+ + GRR+P AVD+PT +I + + G IE + +PRE
Sbjct: 6 VIWPRYLDAEKSRSAGRRVPLEDAVDDPTVDEIAEAVQQIGYDAVIERDVTHPREWE--- 62
Query: 76 FVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGAL 110
RV +K D S N +AV ++G L
Sbjct: 63 ---ANGRVIVKGADDSTKN---DLVQAVAAYVGIL 91
>gi|58260218|ref|XP_567519.1| signal recognition particle protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134116350|ref|XP_773129.1| hypothetical protein CNBJ1240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255750|gb|EAL18482.1| hypothetical protein CNBJ1240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229569|gb|AAW46002.1| signal recognition particle protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 355
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISK 73
W +YP Y + K ++ GRR+P+ AV P I + + GL +E + +P +
Sbjct: 142 WNVVYPLYFDAKVSINSGRRVPRTSAVWWPIATQIAEACKSLGLPSVLEPERCHPADWEN 201
Query: 74 EHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHL 107
GR +VQ DG +NP R + H+
Sbjct: 202 P----GRVKVQFVK-DGRFINPIIKNRTQLYKHI 230
>gi|448305653|ref|ZP_21495582.1| Signal recognition particle 19 kDa protein [Natronorubrum
sulfidifaciens JCM 14089]
gi|445588111|gb|ELY42357.1| Signal recognition particle 19 kDa protein [Natronorubrum
sulfidifaciens JCM 14089]
Length = 93
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PAY++ + +EGRR+ + AV+ PT +I + G IE +K Y S+EH
Sbjct: 5 VIWPAYLDAALSRSEGRRVSQELAVEEPTVDEIAKAVQQIGYDATIERDKAY----SREH 60
Query: 76 FVRGRARVQLKNDDGSPVN 94
+ R RV ++ D S N
Sbjct: 61 WA-DRGRVVVRGADDSTKN 78
>gi|11498857|ref|NP_070086.1| signal recognition particle subunit 19 [Archaeoglobus fulgidus
DSM 4304]
gi|12230628|sp|O29010.1|SRP19_ARCFU RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|2649324|gb|AAB89988.1| signal recognition particle, subunit SRP19 (srp19) [Archaeoglobus
fulgidus DSM 4304]
Length = 104
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 18 IYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREISKE 74
++ ++ KK+ AEGRRIP+ AV N ++ + GLK+ E K YP+ +E
Sbjct: 6 VWTVNLDSKKSRAEGRRIPRRFAVPNVKLHELVEACKELGLKFRAEEKKYPKSWWEE 62
>gi|76802541|ref|YP_327549.1| signal recognition particle 19K protein [Natronomonas pharaonis
DSM 2160]
gi|121723108|sp|Q3IPF4.1|SRP19_NATPD RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|76558406|emb|CAI49997.1| signal recognition particle 19K protein [Natronomonas pharaonis
DSM 2160]
Length = 92
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 18 IYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEHF 76
I+PAY++ T EGRR+ + AV+ PT +I + G IE +K YPRE
Sbjct: 6 IWPAYLDANCTRNEGRRVAEDLAVEEPTVDEIASAVQQVGYDAVIERSKTYPREYEP--- 62
Query: 77 VRGRARVQLKND 88
RGR V+ +D
Sbjct: 63 -RGRVVVKGADD 73
>gi|68475204|ref|XP_718320.1| hypothetical protein CaO19.10089 [Candida albicans SC5314]
gi|68475403|ref|XP_718224.1| hypothetical protein CaO19.2557 [Candida albicans SC5314]
gi|46439982|gb|EAK99293.1| hypothetical protein CaO19.2557 [Candida albicans SC5314]
gi|46440082|gb|EAK99392.1| hypothetical protein CaO19.10089 [Candida albicans SC5314]
Length = 275
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 3 TIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI 62
T + KK D ++ IYP Y + ++ +GRR+ +AV+NP I D GL +
Sbjct: 83 TEEEKKQFD--QFQIIYPCYFDINRSHKQGRRVSIDRAVENPLATTISDTCRRLGLPVFL 140
Query: 63 E-NKLYPREISKEHFVRGRARVQLKN--DDGSPVNPDFPTREAVM 104
E +K +P++ GR +V K D+G +NP T+ +
Sbjct: 141 ELDKTHPQDFGNP----GRVKVLFKAVFDNGKLINPKLQTKRVLF 181
>gi|170291121|ref|YP_001737937.1| ribonucleoprotein complex SRP, Srp19 component [Candidatus
Korarchaeum cryptofilum OPF8]
gi|170175201|gb|ACB08254.1| Ribonucleoprotein complex SRP, Srp19 component [Candidatus
Korarchaeum cryptofilum OPF8]
Length = 104
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 30/47 (63%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE 63
IYP+Y + + + +GRR+P++ A+ PT +D+ + L + + + +E
Sbjct: 8 VIYPSYFDSRLSRKDGRRVPRSLAIRGPTLQDLINALKSLSMSFDVE 54
>gi|156064741|ref|XP_001598292.1| hypothetical protein SS1G_00378 [Sclerotinia sclerotiorum 1980]
gi|154691240|gb|EDN90978.1| hypothetical protein SS1G_00378 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 283
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 2 ATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYH 61
+T D+ K+ D + CIYP Y + ++ AEGRR+ AV NP ++I S +
Sbjct: 85 STEDSSKYRDFQ---CIYPIYFDATRSRAEGRRVGMELAVKNPVAREIVAACS----RLR 137
Query: 62 IENKLYPREISKEHFVR-GRARVQLK 86
IE P + + + GR +V +K
Sbjct: 138 IETLFEPVKTHPKDWANPGRVKVNIK 163
>gi|448434889|ref|ZP_21586587.1| ribonucleoprotein complex SRP, Srp19 component [Halorubrum
tebenquichense DSM 14210]
gi|445684512|gb|ELZ36888.1| ribonucleoprotein complex SRP, Srp19 component [Halorubrum
tebenquichense DSM 14210]
Length = 92
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREI 71
+YPAY + + + +EGRR+P AV+ PT +I + G +E + YPRE
Sbjct: 5 VVYPAYFDAELSRSEGRRVPTDLAVEAPTVDEIAKAVQQVGYDAVVERDATYPREF 60
>gi|448509312|ref|XP_003866112.1| Sec65 protein [Candida orthopsilosis Co 90-125]
gi|380350450|emb|CCG20672.1| Sec65 protein [Candida orthopsilosis Co 90-125]
Length = 280
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 13 ERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREI 71
E++ IYP Y + ++ EGRR+ +AV+NP I D + +E +K +P++
Sbjct: 93 EKFQIIYPCYFDINRSHKEGRRVSIDRAVENPLAIAICDACRALQIPALLELDKTHPQDF 152
Query: 72 SKEHFVRGRARVQLKN--DDGSPVNP 95
GR RV LK+ +D P++P
Sbjct: 153 GNA----GRVRVLLKDFKNDNKPIDP 174
>gi|444316038|ref|XP_004178676.1| hypothetical protein TBLA_0B03160 [Tetrapisispora blattae CBS 6284]
gi|387511716|emb|CCH59157.1| hypothetical protein TBLA_0B03160 [Tetrapisispora blattae CBS 6284]
Length = 251
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
+++ + YP Y ++K++ +GRR+P AV+NP K + D + L E +K +P+
Sbjct: 81 EIKHFTIFYPCYFDKKRSHKQGRRVPIDLAVENPLAKTMADAVQLLQLPCIFEADKTHPQ 140
Query: 70 EISKEHFVRGRARVQL 85
+ GR R+ L
Sbjct: 141 DFGNP----GRVRILL 152
>gi|238879645|gb|EEQ43283.1| signal recognition particle SEC65 subunit [Candida albicans WO-1]
Length = 275
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 3 TIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI 62
T + KK D ++ IYP Y + ++ +GRR+ +AV+NP I D GL +
Sbjct: 83 TEEEKKQFD--QFQIIYPCYFDINRSHKQGRRVSIDRAVENPLATTISDACRRLGLPVFL 140
Query: 63 E-NKLYPREISKEHFVRGRARVQLKN--DDGSPVNPDFPTREAVM 104
E +K +P++ GR +V K D+G +NP T+ +
Sbjct: 141 ELDKTHPQDFGNP----GRVKVLFKAVFDNGKLINPKLQTKRVLF 181
>gi|3334324|sp|O14415.1|SEC65_CANAL RecName: Full=Signal recognition particle SEC65 subunit
gi|2580501|gb|AAC33399.1| Sec65 [Candida albicans]
Length = 275
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 3 TIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI 62
T + KK D ++ IYP Y + ++ +GRR+ +AV+NP I D GL +
Sbjct: 83 TEEEKKQFD--QFQIIYPCYFDINRSHKQGRRVSIDRAVENPLATTISDACRRLGLPVFL 140
Query: 63 E-NKLYPREISKEHFVRGRARVQLKN--DDGSPVNPDFPTREAVM 104
E +K +P++ GR +V K D+G +NP T+ +
Sbjct: 141 ELDKTHPQDFGNP----GRVKVLFKAVFDNGKLINPKLQTKRVLF 181
>gi|397774732|ref|YP_006542278.1| Signal recognition particle 19 kDa protein [Natrinema sp. J7-2]
gi|448343534|ref|ZP_21532458.1| Signal recognition particle 19 kDa protein [Natrinema gari JCM
14663]
gi|397683825|gb|AFO58202.1| Signal recognition particle 19 kDa protein [Natrinema sp. J7-2]
gi|445622878|gb|ELY76319.1| Signal recognition particle 19 kDa protein [Natrinema gari JCM
14663]
Length = 93
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PAY++ + AEGRR+ AV+ PT +I + G IE +K Y S+EH
Sbjct: 5 VIWPAYLDASLSRAEGRRVSLDLAVEEPTVDEIAKAVQQIGYDATIERDKAY----SREH 60
Query: 76 FVRGRARVQLKNDDGSPVN 94
+ R RV ++ D S N
Sbjct: 61 WAE-RGRVVVRGADDSTKN 78
>gi|383625105|ref|ZP_09949511.1| Signal recognition particle 19 kDa protein [Halobiforma lacisalsi
AJ5]
gi|448700717|ref|ZP_21699597.1| Signal recognition particle 19 kDa protein [Halobiforma lacisalsi
AJ5]
gi|445779254|gb|EMA30186.1| Signal recognition particle 19 kDa protein [Halobiforma lacisalsi
AJ5]
Length = 93
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PAY++ + +EGRR+ + AV+ PT +I + G IE +K Y S+EH
Sbjct: 5 VIWPAYLDASLSRSEGRRVSEDLAVEEPTVDEIAKAVQQIGYDATIERDKSY----SREH 60
Query: 76 FVRGRARVQLKNDDGSPVN 94
+ + R RV ++ D S N
Sbjct: 61 WAQ-RGRVVVRGADDSTKN 78
>gi|408382404|ref|ZP_11179949.1| Signal recognition particle 19 kDa protein [Methanobacterium
formicicum DSM 3637]
gi|407815060|gb|EKF85682.1| Signal recognition particle 19 kDa protein [Methanobacterium
formicicum DSM 3637]
Length = 96
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN-KLYP 68
I+PAYI+ K+ +EGR+IPK +AV++P ++I L +E K YP
Sbjct: 7 TIIWPAYIDSTKSKSEGRKIPKKQAVNSPKLREITQAAKKLRLNPSVEKYKSYP 60
>gi|355572231|ref|ZP_09043413.1| Signal recognition particle 19 kDa protein [Methanolinea tarda
NOBI-1]
gi|354824947|gb|EHF09186.1| Signal recognition particle 19 kDa protein [Methanolinea tarda
NOBI-1]
Length = 90
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 18 IYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYP 68
IYP Y N +GRR+ + AV +PT D++ GL + E K +P
Sbjct: 7 IYPCYFNSALKRGQGRRVALSGAVSDPTLADLERAAKRAGLVFRSEQKHFP 57
>gi|331251181|ref|XP_003338191.1| hypothetical protein PGTG_19799 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309317181|gb|EFP93772.1| hypothetical protein PGTG_19799 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 264
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 7 KKHTDVER---WVCIYPAYINRKKTLAE-GRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI 62
KK D R W IYP Y++ K GRR+ ++ P + I + GL +
Sbjct: 68 KKEVDRSRTKNWETIYPRYLDSKAPCKTGGRRVALKYSLRWPLAQLIQHACTQIGLPCQL 127
Query: 63 EN-KLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKS 116
EN K++P + GR +V +K ++ P++P P + A++ +G L+ L++
Sbjct: 128 ENDKVHPADWENP----GRVKVLIKRNN-KPIDPSIPNKYALLCKIGLLLRPLET 177
>gi|398014290|ref|XP_003860336.1| hypothetical protein, conserved [Leishmania donovani]
gi|322498556|emb|CBZ33629.1| hypothetical protein, conserved [Leishmania donovani]
Length = 165
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN--KLYP 68
D + + IYP Y++ T +EGRR+ K++ V++PT ++I L G K I + + YP
Sbjct: 17 DKKAYQTIYPQYLDSYLTPSEGRRLTKSQGVEHPTMEEILHALRVLGYKDVIVDPARSYP 76
Query: 69 REISKEHF---VRGRARVQLKND-DGSPVNPDF--PTREAVM 104
R S F RG +V +K D + DF TR AV+
Sbjct: 77 RSQSTTKFPMVPRGCIKVAIKTPVDEHYIKSDFDTQTRSAVV 118
>gi|448634711|ref|ZP_21675109.1| signal recognition particle 19 kDa protein [Haloarcula
vallismortis ATCC 29715]
gi|445749684|gb|EMA01129.1| signal recognition particle 19 kDa protein [Haloarcula
vallismortis ATCC 29715]
Length = 92
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PA ++ ++ ++GRR+ AVD+PT +I + G IE +K YPR E+
Sbjct: 5 VIWPAALDADRSRSDGRRVSLDLAVDDPTVDEIAKAVQQVGYDAVIERDKTYPR----EY 60
Query: 76 FVRGRARVQLKND 88
RGR V+ +D
Sbjct: 61 EARGRVVVKDADD 73
>gi|448301250|ref|ZP_21491243.1| Signal recognition particle 19 kDa protein [Natronorubrum
tibetense GA33]
gi|445583986|gb|ELY38310.1| Signal recognition particle 19 kDa protein [Natronorubrum
tibetense GA33]
Length = 93
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PAY++ + AEGRR+ + AV+ PT +I + G IE +K Y S+EH
Sbjct: 5 VIWPAYLDAGLSRAEGRRVSQDLAVEEPTVDEIAKSVQQIGYDATIERDKAY----SREH 60
Query: 76 FVRGRARVQLKNDDGSPVN 94
+ R RV ++ D S N
Sbjct: 61 WA-DRGRVVVRGADDSTKN 78
>gi|448717460|ref|ZP_21702709.1| Signal recognition particle 19 kDa protein [Halobiforma
nitratireducens JCM 10879]
gi|445785886|gb|EMA36668.1| Signal recognition particle 19 kDa protein [Halobiforma
nitratireducens JCM 10879]
Length = 93
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PAY++ + +EGRR+ AV+ PT +I + G IE +K Y S+EH
Sbjct: 5 VIWPAYLDASLSRSEGRRVSDELAVEEPTVDEIAKAVQQIGYDATIERDKSY----SREH 60
Query: 76 FVRGRARVQLKNDDGSPVN 94
+ + R RV ++ D S N
Sbjct: 61 WAQ-RGRVVVRGADDSTKN 78
>gi|257053569|ref|YP_003131402.1| Ribonucleoprotein complex SRP, Srp19 component [Halorhabdus
utahensis DSM 12940]
gi|256692332|gb|ACV12669.1| Ribonucleoprotein complex SRP, Srp19 component [Halorhabdus
utahensis DSM 12940]
Length = 92
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PA ++ +EGRR+ + AV+ PT ++I + + G IE K YPR E+
Sbjct: 5 VIWPAALDADLARSEGRRVSEELAVEEPTIEEIAEAVQQVGYDAVIEREKTYPR----EY 60
Query: 76 FVRGRARVQLKND 88
RGR V+ +D
Sbjct: 61 ETRGRVLVKDADD 73
>gi|448468533|ref|ZP_21599866.1| ribonucleoprotein complex SRP, Srp19 component [Halorubrum
kocurii JCM 14978]
gi|445810593|gb|EMA60616.1| ribonucleoprotein complex SRP, Srp19 component [Halorubrum
kocurii JCM 14978]
Length = 92
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
+YPAY + ++ +EGRR+P A++ PT +I + G IE K Y RE
Sbjct: 5 VVYPAYFDADRSRSEGRRVPMDLAIEEPTVDEIAKAVQQVGYDAVIEREKTYSREFEP-- 62
Query: 76 FVRGRARVQLKND 88
RG VQ D
Sbjct: 63 --RGAVVVQGTED 73
>gi|157868392|ref|XP_001682749.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68126204|emb|CAJ07262.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 166
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN--KLYP 68
D + + IYP Y++ T +EGRR+ K++ V++PT ++I L G K I + + YP
Sbjct: 17 DKKAYQTIYPQYLDSYLTPSEGRRLTKSQGVEHPTMEEILQALRVLGYKDVIVDPARSYP 76
Query: 69 REISKEHF---VRGRARVQLKN 87
R S F RG +V +K
Sbjct: 77 RSQSTTKFPMVPRGCIKVAIKT 98
>gi|429193687|ref|YP_007179365.1| signal recognition particle 19 kDa protein [Natronobacterium
gregoryi SP2]
gi|448325937|ref|ZP_21515313.1| Signal recognition particle 19 kDa protein [Natronobacterium
gregoryi SP2]
gi|429137905|gb|AFZ74916.1| signal recognition particle 19 kDa protein [Natronobacterium
gregoryi SP2]
gi|445613702|gb|ELY67394.1| Signal recognition particle 19 kDa protein [Natronobacterium
gregoryi SP2]
Length = 93
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PAY++ + +EGRR+ AV+ PT +I + G IE +K Y S+EH
Sbjct: 5 VIWPAYLDASLSRSEGRRVSSDLAVEEPTVDEIAKAVQQIGYDATIERDKSY----SREH 60
Query: 76 FVRGRARVQLKNDDGSPVN 94
+ + R RV ++ D S N
Sbjct: 61 WAQ-RGRVVVRGADDSTKN 78
>gi|344211091|ref|YP_004795411.1| signal recognition particle 19 kDa protein [Haloarcula hispanica
ATCC 33960]
gi|343782446|gb|AEM56423.1| signal recognition particle 19 kDa protein [Haloarcula hispanica
ATCC 33960]
Length = 100
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PA ++ ++ ++GRR+ AV++PT +I + G IE +K YPRE
Sbjct: 13 VIWPAALDANRSRSDGRRVSLDLAVEDPTVDEIAKAVQQVGYDAVIERDKTYPREYE--- 69
Query: 76 FVRGRARVQLKNDDGS 91
GR RV +K+ D +
Sbjct: 70 ---GRGRVVVKDADDA 82
>gi|154151848|ref|YP_001405466.1| ribonucleoprotein complex SRP, Srp19 component [Methanoregula
boonei 6A8]
gi|171769718|sp|A7IAR2.1|SRP19_METB6 RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|154000400|gb|ABS56823.1| Ribonucleoprotein complex SRP, Srp19 component [Methanoregula
boonei 6A8]
Length = 91
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 12 VERWVCI-YPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPRE 70
+E+ CI YP Y N + AEGRR+P+ A P D++ L G+ E +P
Sbjct: 1 MEKGECILYPCYFNAALSRAEGRRVPRNIAAKGPNANDVERALRRLGIACQAEEHHHP-- 58
Query: 71 ISKEHFVRGRARV 83
H+ R R+
Sbjct: 59 ---AHWARHEGRI 68
>gi|406603163|emb|CCH45316.1| Signal recognition particle subunit [Wickerhamomyces ciferrii]
Length = 266
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 18 IYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEHF 76
IYP Y ++ ++ EGRR+ K AV+NP K I D + L E K +P++
Sbjct: 93 IYPCYFDKNRSHKEGRRVSKELAVENPLAKTIADACVSLHLVAVYEPEKTHPQDFGNP-- 150
Query: 77 VRGRARVQLKNDDGSP 92
GR RV LK+ +G P
Sbjct: 151 --GRIRVALKH-EGKP 163
>gi|20151088|pdb|1KVN|A Chain A, Solution Structure Of Protein Srp19 Of The Arhaeoglobus
Fulgidus Signal Recognition Particle, 10 Structures
gi|20151089|pdb|1KVV|A Chain A, Solution Structure Of Protein Srp19 Of The Archaeoglobus
Fulgidus Signal Recognition Particle, Minimized Average
Structure
Length = 104
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREISKE 74
++ ++ KK+ AEGRRIP+ AV N ++ + GLK+ E K YP+ +E
Sbjct: 5 VVWTVNLDSKKSRAEGRRIPRRFAVPNVKLHELVEASKELGLKFRAEEKKYPKSWWEE 62
>gi|156937561|ref|YP_001435357.1| signal recognition particle subunit SRP19 (srp19) [Ignicoccus
hospitalis KIN4/I]
gi|172044470|sp|A8AAJ8.1|SRP19_IGNH4 RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|156566545|gb|ABU81950.1| signal recognition particle, subunit SRP19 (srp19) [Ignicoccus
hospitalis KIN4/I]
Length = 99
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 14 RWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPRE 70
++V ++P Y + + EGRR+P+ AV P+ K++ +V + GL+ YPRE
Sbjct: 9 KYVILWPQYFDSSLSRKEGRRVPRELAVARPSQKELLEVAAALGLEAKPLEGKYPRE 65
>gi|154322767|ref|XP_001560698.1| signal recognition particle protein Sec65 [Botryotinia fuckeliana
B05.10]
Length = 283
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 2 ATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYH 61
+T D+ K+ D + CIYP Y + ++ AEGRR+ AV NP ++I S +
Sbjct: 86 STEDSSKYKDFQ---CIYPIYFDATRSRAEGRRVGMELAVKNPVAREIVAACS----RLR 138
Query: 62 IENKLYPREISKEHFVR-GRARVQLK 86
IE P + + + GR +V ++
Sbjct: 139 IETLFEPVKTHPKDWANPGRVKVNIR 164
>gi|448445859|ref|ZP_21590506.1| ribonucleoprotein complex SRP, Srp19 component [Halorubrum
saccharovorum DSM 1137]
gi|445684698|gb|ELZ37070.1| ribonucleoprotein complex SRP, Srp19 component [Halorubrum
saccharovorum DSM 1137]
Length = 92
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREI 71
+YPAY + ++ +EGRR+P A++ PT +I + G IE K Y RE
Sbjct: 5 VVYPAYFDADRSRSEGRRVPMDLAIEEPTVDEIAKAVQQVGYDAVIEREKTYSREF 60
>gi|347837119|emb|CCD51691.1| hypothetical protein [Botryotinia fuckeliana]
Length = 283
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 2 ATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYH 61
+T D+ K+ D + CIYP Y + ++ AEGRR+ AV NP ++I S +
Sbjct: 86 STEDSSKYKDFQ---CIYPIYFDATRSRAEGRRVGMELAVKNPVAREIVAACS----RLR 138
Query: 62 IENKLYPREISKEHFVR-GRARVQLK 86
IE P + + + GR +V ++
Sbjct: 139 IETLFEPVKTHPKDWANPGRVKVNIR 164
>gi|374630352|ref|ZP_09702737.1| signal recognition particle, subunit SRP19 (srp19) [Methanoplanus
limicola DSM 2279]
gi|373908465|gb|EHQ36569.1| signal recognition particle, subunit SRP19 (srp19) [Methanoplanus
limicola DSM 2279]
Length = 89
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREISKEH 75
+ IYP Y ++K +EGRR+PK AV +P I + GL +E K +P ++
Sbjct: 5 LVIYPCYFDQKLKRSEGRRVPKDLAVQSPDLNLIVSAVKKAGLNPVVEEKSHPAFWLEK- 63
Query: 76 FVRGRARVQ 84
+GR RV+
Sbjct: 64 --KGRVRVK 70
>gi|222479152|ref|YP_002565389.1| ribonucleoprotein complex SRP, Srp19 component [Halorubrum
lacusprofundi ATCC 49239]
gi|254772971|sp|B9LUG2.1|SRP19_HALLT RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|222452054|gb|ACM56319.1| Ribonucleoprotein complex SRP, Srp19 component [Halorubrum
lacusprofundi ATCC 49239]
Length = 92
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREI 71
+YPAY + ++ +EGRR+P A++ PT +I + G IE K Y RE
Sbjct: 5 VVYPAYFDADRSRSEGRRVPMDLAIEEPTVDEIAKAVQQVGYDAVIEREKTYSREF 60
>gi|288560802|ref|YP_003424288.1| signal recognition particle SRP19 protein [Methanobrevibacter
ruminantium M1]
gi|288543512|gb|ADC47396.1| signal recognition particle SRP19 protein [Methanobrevibacter
ruminantium M1]
Length = 107
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI-ENKLYPREISKE 74
V I+P Y++ K+L EGR+I + A+ P K+I+ KY + E+K YP E
Sbjct: 4 VMIWPIYLDADKSLNEGRKISQEYAISEPRIKEIEKAAQKLKYKYTVEEDKSYPGE---- 59
Query: 75 HFVRGRARVQLKNDDG 90
+ R+ ++ DD
Sbjct: 60 -WYNKSGRIIIETDDS 74
>gi|410722615|ref|ZP_11361884.1| signal recognition particle 19 kDa protein [Methanobacterium sp.
Maddingley MBC34]
gi|410595946|gb|EKQ50634.1| signal recognition particle 19 kDa protein [Methanobacterium sp.
Maddingley MBC34]
Length = 96
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 15/97 (15%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN-KLYPREISKE 74
I+PAYI+ K+ +EGR+IPK ++V++P ++I L +E K YP
Sbjct: 7 TIIWPAYIDSAKSKSEGRKIPKKQSVNSPKIREITQAAKKLRLNPSVEKYKSYP-----S 61
Query: 75 HFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALI 111
+ G R+ + N ++ V++ L LI
Sbjct: 62 SWWEGSGRIIVDNK---------MSKREVLIKLSNLI 89
>gi|146084883|ref|XP_001465130.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134069226|emb|CAM67373.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 166
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN--KLYP 68
D + + IYP Y++ T +EGRR+ K++ V++PT ++I L G K I + + YP
Sbjct: 17 DKKAYQTIYPQYLDSYLTPSEGRRLTKSQGVEHPTMEEILHALRVLGYKDVIVDPARSYP 76
Query: 69 REISKEHF---VRGRARVQLKN 87
R S F RG +V +K
Sbjct: 77 RSQSTTKFPMVPRGCIKVAIKT 98
>gi|400597848|gb|EJP65572.1| signal recognition particle sec65 subunit [Beauveria bassiana ARSEF
2860]
Length = 282
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISK 73
+ +YP Y + +T A+GRR+ A AV NP ++I + S L+ +E K +P++ +
Sbjct: 84 YQSLYPIYFDASRTRAQGRRVSAALAVKNPLAREIANACSRLRLQTVLEPEKTHPKDWAN 143
Query: 74 EHFVRGRARVQLK 86
GR +V LK
Sbjct: 144 P----GRVKVALK 152
>gi|396081882|gb|AFN83496.1| signal recognition particle Srp19 [Encephalitozoon romaleae
SJ-2008]
Length = 137
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 11/75 (14%)
Query: 14 RWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREISK 73
++ C+YP +++ +++L+EGR+ K V P Y +I + L ++ H++ E SK
Sbjct: 4 KYFCLYPIHMDSRRSLSEGRKYKKEICVQRPRYHEIKNALEKLEIE-HVD------EASK 56
Query: 74 EH----FVRGRARVQ 84
H F GR R++
Sbjct: 57 RHPNDFFNGGRFRIK 71
>gi|344304212|gb|EGW34461.1| hypothetical protein SPAPADRAFT_59886 [Spathaspora passalidarum
NRRL Y-27907]
Length = 275
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 12 VERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPRE 70
+ ++ IYP Y + ++ +GRR+ +AV+NP K I D + L +E K +P++
Sbjct: 90 LSKFQIIYPCYFDINRSHKQGRRVSIDRAVENPLAKTISDACRSLNLPVLLELEKSHPQD 149
Query: 71 ISKEHFVRGRARVQLKN 87
GR RV LK+
Sbjct: 150 FGNP----GRVRVLLKD 162
>gi|448402681|ref|ZP_21572111.1| Signal recognition particle 19 kDa protein [Haloterrigena
limicola JCM 13563]
gi|445664936|gb|ELZ17622.1| Signal recognition particle 19 kDa protein [Haloterrigena
limicola JCM 13563]
Length = 93
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PAY++ + ++GRR+ + AV+ PT +I + G IE +K Y S+EH
Sbjct: 5 VIWPAYLDADLSRSDGRRVSQDLAVEEPTVDEIAKAVQQIGYDATIERDKAY----SREH 60
Query: 76 FVRGRARVQLKNDDGSPVN 94
++ R RV ++ D S N
Sbjct: 61 WL-DRGRVVVRGADDSTKN 78
>gi|154418215|ref|XP_001582126.1| SRP19 protein [Trichomonas vaginalis G3]
gi|121916359|gb|EAY21140.1| SRP19 protein [Trichomonas vaginalis G3]
Length = 125
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 14/121 (11%)
Query: 14 RWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREIS 72
R VC YP YI+ +GR+I K V+ PT K++ G E +K +PR+
Sbjct: 5 RIVC-YPCYIDSTTKEFDGRKISKELCVEKPTIKELILAFKDCGFTGKEEADKTHPRDF- 62
Query: 73 KEHFVRGRARVQL-----KNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQN 127
F GR + + + +NP++ R+++ AL K+K + SE
Sbjct: 63 ---FRSGRVSIDFYSINEETKKKTLLNPNYKNRKSIY---AALAAKIKENRANNRTSEVQ 116
Query: 128 Q 128
Q
Sbjct: 117 Q 117
>gi|346323618|gb|EGX93216.1| signal recognition particle protein Sec65 [Cordyceps militaris
CM01]
Length = 277
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISK 73
+ +YP Y + +T A+GRR+ A AV NP ++I + S L+ +E K +P++ +
Sbjct: 84 YQSLYPVYFDASRTRAQGRRVSAALAVANPLAREIANACSRLRLQTVLEPEKTHPKDWAN 143
Query: 74 EHFVRGRARVQLK 86
GR +V L+
Sbjct: 144 P----GRVKVALR 152
>gi|304314377|ref|YP_003849524.1| hypothetical protein MTBMA_c06160 [Methanothermobacter
marburgensis str. Marburg]
gi|302587836|gb|ADL58211.1| conserved hypothetical protein [Methanothermobacter marburgensis
str. Marburg]
Length = 89
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYP 68
+ I+PAY++ +K+ ++GRR+P AV++PT +I L+ +E +K YP
Sbjct: 1 MIIWPAYLDSRKSRSQGRRVPLEYAVESPTASEILRAAKKLQLEARMESDKSYP 54
>gi|84489982|ref|YP_448214.1| signal recognition particle, 19 kDa protein [Methanosphaera
stadtmanae DSM 3091]
gi|121722888|sp|Q2NF32.1|SRP19_METST RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|84373301|gb|ABC57571.1| signal recognition particle, 19 kDa protein [Methanosphaera
stadtmanae DSM 3091]
Length = 92
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYP 68
I+P YIN + + EGR++ ++V+ P ++I L ++Y +E NK YP
Sbjct: 4 IIWPTYINSEHSRGEGRKLSLEESVEEPKIREISQSLKKLKIQYVVEHNKSYP 56
>gi|344228943|gb|EGV60829.1| hypothetical protein CANTEDRAFT_111483 [Candida tenuis ATCC 10573]
Length = 270
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 2 ATIDTKKHTDVER-----WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTT 56
A D K TD E+ + IYP Y ++ ++ +GRR+ + AV+NP I D
Sbjct: 75 AIRDPKSFTDEEKREFKAYQTIYPCYFDKNRSHKQGRRVSEENAVENPLALTIGDACRFL 134
Query: 57 GLKYHIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVN 94
+E ++ +PR+ GR +V L+ +G P++
Sbjct: 135 QFPVLLELDRTHPRDFGNP----GRVKVLLRK-NGEPID 168
>gi|448667539|ref|ZP_21686039.1| signal recognition particle 19 kDa protein [Haloarcula
amylolytica JCM 13557]
gi|445770107|gb|EMA21175.1| signal recognition particle 19 kDa protein [Haloarcula
amylolytica JCM 13557]
Length = 92
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PA ++ ++ ++GRR+ AV++PT +I + G IE +K YPR E+
Sbjct: 5 VIWPAALDANRSRSDGRRVSLDLAVEDPTVDEIAKAVQQVGYDVVIERDKTYPR----EY 60
Query: 76 FVRGRARVQLKND 88
RGR V+ +D
Sbjct: 61 EARGRVVVKDADD 73
>gi|354611060|ref|ZP_09029016.1| Signal recognition particle 19 kDa protein [Halobacterium sp.
DL1]
gi|353195880|gb|EHB61382.1| Signal recognition particle 19 kDa protein [Halobacterium sp.
DL1]
Length = 93
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKL-YPREISKEH 75
I+PAY + + +GRRIP++ AV+ PT +I + G +E + YPR ++
Sbjct: 5 VIWPAYFDATLSRRDGRRIPRSLAVEEPTVDEIATAVQQVGYDAVVERDVSYPRRHWEQS 64
Query: 76 FVRGRARVQLKNDDG 90
GR V+ +D G
Sbjct: 65 ---GRVLVKDADDAG 76
>gi|448689139|ref|ZP_21694876.1| signal recognition particle 19 kDa protein [Haloarcula japonica
DSM 6131]
gi|445779009|gb|EMA29951.1| signal recognition particle 19 kDa protein [Haloarcula japonica
DSM 6131]
Length = 92
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PA ++ ++ ++GRR+ AV++PT +I + G IE +K YPR E+
Sbjct: 5 VIWPAALDANRSRSDGRRVSLDLAVEDPTVDEIAKAVQQVGYDAVIERDKTYPR----EY 60
Query: 76 FVRGRARVQLKND 88
RGR V+ +D
Sbjct: 61 EARGRVVVKDADD 73
>gi|448356194|ref|ZP_21544941.1| Signal recognition particle 19 kDa protein [Natrialba
hulunbeirensis JCM 10989]
gi|445633408|gb|ELY86596.1| Signal recognition particle 19 kDa protein [Natrialba
hulunbeirensis JCM 10989]
Length = 93
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPRE 70
I+PAY++ + A+GRR+ + AVD P+ +I + G IE +K Y RE
Sbjct: 5 VIWPAYLDASLSRADGRRVSEELAVDEPSVDEIAKAVQQIGYDATIERDKAYSRE 59
>gi|353234740|emb|CCA66762.1| hypothetical protein PIIN_00442 [Piriformospora indica DSM 11827]
Length = 292
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 6 TKKHTDVERWVCIYPAYINRKKTLAEG-RRIPKAKAVDNPTYKDIDDVLSTTGLK-YHIE 63
T + + W+ IYP YI+ K+ G RRI + K+V P DI S GL H
Sbjct: 82 TTDRSQFKDWLQIYPIYIDAKQPFKSGCRRIAREKSVWWPLSMDIAQAASILGLNVVHEA 141
Query: 64 NKLYPREISKEHFVRGRARVQLKN 87
+PR+ + GR R+ K
Sbjct: 142 QAFHPRDWANP----GRVRINWKE 161
>gi|401419697|ref|XP_003874338.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490573|emb|CBZ25834.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 166
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN--KLYPREIS 72
+ IYP Y++ T +EGRR+ K++ V++PT ++I + L G I + + YPR S
Sbjct: 21 YQTIYPQYLDSYLTPSEGRRLTKSQGVEHPTMEEILNALRVLGYTDVIVDPARSYPRSQS 80
Query: 73 KEHF---VRGRARVQLKN 87
F RG +V +K
Sbjct: 81 TTKFPMVPRGCIKVAIKT 98
>gi|20094987|ref|NP_614834.1| signal recognition particle protein Srp19 [Methanopyrus kandleri
AV19]
gi|23396864|sp|Q8TV49.1|SRP19_METKA RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|19888244|gb|AAM02764.1| 19 kDa subunit of the signal recognition particle [Methanopyrus
kandleri AV19]
Length = 103
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
+ ++PAY + ++ +EGR++PK AV NP ++ + GL ++ +K YP+
Sbjct: 15 IVVWPAYFDADRSRSEGRKVPKRLAVRNPRLTELRHIAEKLGLNPKVQRDKRYPK 69
>gi|289583250|ref|YP_003481716.1| ribonucleoprotein complex SRP, Srp19 component [Natrialba magadii
ATCC 43099]
gi|448283283|ref|ZP_21474560.1| ribonucleoprotein complex SRP, Srp19 component [Natrialba magadii
ATCC 43099]
gi|289532803|gb|ADD07154.1| Ribonucleoprotein complex SRP, Srp19 component [Natrialba magadii
ATCC 43099]
gi|445574571|gb|ELY29070.1| ribonucleoprotein complex SRP, Srp19 component [Natrialba magadii
ATCC 43099]
Length = 93
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPRE 70
I+PAY++ + A+GRR+ + AVD P+ +I + G IE +K Y RE
Sbjct: 5 VIWPAYLDASLSRADGRRVSEELAVDEPSVDEIAKAVQQIGYDATIERDKAYSRE 59
>gi|448359089|ref|ZP_21547753.1| Signal recognition particle 19 kDa protein [Natrialba
chahannaoensis JCM 10990]
gi|445644019|gb|ELY97052.1| Signal recognition particle 19 kDa protein [Natrialba
chahannaoensis JCM 10990]
Length = 93
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPRE 70
I+PAY++ + A+GRR+ + AVD P+ +I + G IE +K Y RE
Sbjct: 5 VIWPAYLDASLSRADGRRVSEELAVDEPSVDEIAKAVQQIGYDATIERDKAYSRE 59
>gi|254571305|ref|XP_002492762.1| Subunit of the signal recognition particle (SRP), involved in
protein targeting to the ER [Komagataella pastoris
GS115]
gi|238032560|emb|CAY70583.1| Subunit of the signal recognition particle (SRP), involved in
protein targeting to the ER [Komagataella pastoris
GS115]
gi|328353230|emb|CCA39628.1| Signal recognition particle SEC65 subunit [Komagataella pastoris
CBS 7435]
Length = 270
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 7 KKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NK 65
K+ +++ + +YP Y ++ +++ EGRR K V+NP K I D + +E K
Sbjct: 87 KEMAELKSFQILYPCYFDKNRSVKEGRRCQKEYGVENPLAKTILDACRYLDIPCILEPEK 146
Query: 66 LYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALI 111
+P++ GR RV +K + G ++ + T+ ++ +G +
Sbjct: 147 THPQDFGNP----GRVRVAIK-ESGKYLDEQYKTKRKLIQLVGQFL 187
>gi|448500773|ref|ZP_21611935.1| ribonucleoprotein complex SRP, Srp19 component [Halorubrum coriense
DSM 10284]
gi|445696012|gb|ELZ48107.1| ribonucleoprotein complex SRP, Srp19 component [Halorubrum coriense
DSM 10284]
Length = 92
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
+YPAY + + + +EGRR+P AV+ PT +I + G +E + Y RE
Sbjct: 5 VVYPAYFDAELSRSEGRRVPTDLAVEAPTVDEIAKAVQQVGYDAVVERDAAYSREF---- 60
Query: 76 FVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGAL 110
R V +K + + N +A+ +LG L
Sbjct: 61 --EARGSVVVKGTEDTAKN---DLVQAIAAYLGVL 90
>gi|385806268|ref|YP_005842666.1| signal recognition particle protein Srp19 [Fervidicoccus fontis
Kam940]
gi|383796131|gb|AFH43214.1| signal recognition particle protein Srp19 [Fervidicoccus fontis
Kam940]
Length = 102
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPRE 70
+ IYP+Y++ + GR+IPK+ V P+ +I +V L +E+K +P++
Sbjct: 11 IVIYPSYLDCTSSRTHGRKIPKSLCVQKPSISEILEVAKGLSLNPILEDKKFPKK 65
>gi|212224492|ref|YP_002307728.1| signal recognition particle protein Srp19 [Thermococcus
onnurineus NA1]
gi|212009449|gb|ACJ16831.1| signal recognition particle, SRP19 subunit [Thermococcus
onnurineus NA1]
Length = 114
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 14 RWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY--HIENKLYPRE- 70
R ++P ++ + + GR I K AVD PT ++I D + + G+K ENKL PR
Sbjct: 2 RKFVVWPNELDARLSRRYGRTIGKEFAVDGPTIQEIVDAVESLGMKVVELDENKLNPRLA 61
Query: 71 -ISKEHFVRGRARVQLKNDDGSPV 93
+ +E+ RG R++ K+ G +
Sbjct: 62 GLDEEYRRRGMVRIESKHPKGKSL 85
>gi|148643561|ref|YP_001274074.1| signal recognition particle, subunit SRP19 [Methanobrevibacter
smithii ATCC 35061]
gi|222444942|ref|ZP_03607457.1| hypothetical protein METSMIALI_00558 [Methanobrevibacter smithii
DSM 2375]
gi|261350485|ref|ZP_05975902.1| SRP19 protein [Methanobrevibacter smithii DSM 2374]
gi|172048099|sp|A5UNC8.1|SRP19_METS3 RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|148552578|gb|ABQ87706.1| signal recognition particle, subunit SRP19 [Methanobrevibacter
smithii ATCC 35061]
gi|222434507|gb|EEE41672.1| SRP19 protein [Methanobrevibacter smithii DSM 2375]
gi|288861267|gb|EFC93565.1| SRP19 protein [Methanobrevibacter smithii DSM 2374]
Length = 89
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYP 68
+ ++P Y+++ +L EGR++ K AV+ P +DI+ L L Y + + YP
Sbjct: 2 ITVWPQYLDKNLSLNEGRKVSKEIAVEEPKLQDIEKALKRLNLPYSTQKERSYP 55
>gi|336254729|ref|YP_004597836.1| Signal recognition particle 19 kDa protein [Halopiger xanaduensis
SH-6]
gi|335338718|gb|AEH37957.1| Signal recognition particle 19 kDa protein [Halopiger xanaduensis
SH-6]
Length = 93
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PAY++ + +EGRR+ + AV+ PT +I + G IE +K Y RE +
Sbjct: 5 VIWPAYLDATLSRSEGRRVSQDLAVEEPTVDEIAKAVQQIGYDATIERDKAYSREPWAQ- 63
Query: 76 FVRGRARVQLKNDDGSPVN 94
R RV ++ D S N
Sbjct: 64 ----RGRVVVRGADDSTKN 78
>gi|435852211|ref|YP_007313797.1| signal recognition particle 19 kDa protein [Methanomethylovorans
hollandica DSM 15978]
gi|433662841|gb|AGB50267.1| signal recognition particle 19 kDa protein [Methanomethylovorans
hollandica DSM 15978]
Length = 94
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
+ I+PAYI++ ++ ++GR I + +V PT +I+ GL +E K YPR
Sbjct: 7 LVIWPAYIDKNRSRSQGRIISRKSSVGEPTLTEIEKAALKLGLNPEVEKEKSYPR 61
>gi|241958070|ref|XP_002421754.1| signal recognition particle subunit sec65 homologue, putative
[Candida dubliniensis CD36]
gi|223645099|emb|CAX39695.1| signal recognition particle subunit sec65 homologue, putative
[Candida dubliniensis CD36]
Length = 294
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 4 IDTKKHTDVER-----WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGL 58
ID T E+ + IYP Y + ++ +GRR+ KAV+NP I D GL
Sbjct: 89 IDPNSFTPQEKEQFNQFQIIYPCYFDINRSHKQGRRVSIDKAVENPLATTISDACKKLGL 148
Query: 59 KYHIE-NKLYPREISKEHFVRGRARVQLK 86
+E +K +P++ GR +V K
Sbjct: 149 PVFLELDKTHPQDFGNP----GRVKVLFK 173
>gi|294494989|ref|YP_003541482.1| signal recognition particle, subunit SRP19 (srp19)
[Methanohalophilus mahii DSM 5219]
gi|292665988|gb|ADE35837.1| signal recognition particle, subunit SRP19 (srp19)
[Methanohalophilus mahii DSM 5219]
Length = 95
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
+ I+PA I+R K+ EGR + + +V P ++++ ++ GL ++ +K YPR
Sbjct: 7 LVIWPASIDRSKSRNEGRIVSRKSSVKEPNLEEMEKAAASLGLNPEVQKDKAYPR 61
>gi|448472741|ref|ZP_21601273.1| ribonucleoprotein complex SRP, Srp19 component [Halorubrum
aidingense JCM 13560]
gi|445819649|gb|EMA69488.1| ribonucleoprotein complex SRP, Srp19 component [Halorubrum
aidingense JCM 13560]
Length = 92
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREI 71
+YPAY + ++ + GRR+P A++ PT +I + G IE +K Y RE
Sbjct: 5 VVYPAYFDANRSRSGGRRVPMDLAIEEPTVDEIAKAVQQVGYDAVIERDKTYSREF 60
>gi|15678193|ref|NP_275308.1| signal recognition particle 19 kDa protein [Methanothermobacter
thermautotrophicus str. Delta H]
gi|12230627|sp|O26267.1|SRP19_METTH RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|2621207|gb|AAB84671.1| signal recognition particle 19 kDa protein [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 91
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYP 68
+ I+P Y++ +K+ +EGRR+P AV++PT +I L+ +E ++ YP
Sbjct: 3 LIIWPTYLDSRKSRSEGRRVPLEYAVESPTASEILRAARKLQLEASMESDRAYP 56
>gi|448428597|ref|ZP_21584329.1| ribonucleoprotein complex SRP, Srp19 component [Halorubrum
terrestre JCM 10247]
gi|448450214|ref|ZP_21592113.1| ribonucleoprotein complex SRP, Srp19 component [Halorubrum
litoreum JCM 13561]
gi|448481557|ref|ZP_21604908.1| ribonucleoprotein complex SRP, Srp19 component [Halorubrum arcis
JCM 13916]
gi|448488399|ref|ZP_21607235.1| ribonucleoprotein complex SRP, Srp19 component [Halorubrum
californiensis DSM 19288]
gi|448507340|ref|ZP_21614958.1| ribonucleoprotein complex SRP, Srp19 component [Halorubrum
distributum JCM 9100]
gi|448523390|ref|ZP_21618689.1| ribonucleoprotein complex SRP, Srp19 component [Halorubrum
distributum JCM 10118]
gi|445676066|gb|ELZ28591.1| ribonucleoprotein complex SRP, Srp19 component [Halorubrum
terrestre JCM 10247]
gi|445696089|gb|ELZ48182.1| ribonucleoprotein complex SRP, Srp19 component [Halorubrum
californiensis DSM 19288]
gi|445698709|gb|ELZ50749.1| ribonucleoprotein complex SRP, Srp19 component [Halorubrum
distributum JCM 9100]
gi|445701207|gb|ELZ53190.1| ribonucleoprotein complex SRP, Srp19 component [Halorubrum
distributum JCM 10118]
gi|445812066|gb|EMA62062.1| ribonucleoprotein complex SRP, Srp19 component [Halorubrum
litoreum JCM 13561]
gi|445821810|gb|EMA71594.1| ribonucleoprotein complex SRP, Srp19 component [Halorubrum arcis
JCM 13916]
Length = 92
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREI 71
+YPAY + + + +EGRR+P AV+ PT +I + G +E + Y RE
Sbjct: 5 VVYPAYFDAELSRSEGRRVPTDLAVEAPTVDEIAKAVQQVGYDAVVERDATYSREF 60
>gi|448456314|ref|ZP_21595117.1| ribonucleoprotein complex SRP, Srp19 component [Halorubrum
lipolyticum DSM 21995]
gi|445812499|gb|EMA62492.1| ribonucleoprotein complex SRP, Srp19 component [Halorubrum
lipolyticum DSM 21995]
Length = 92
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREI 71
+YPAY + ++ + GRR+P A++ PT +I + G IE K Y RE
Sbjct: 5 VVYPAYFDADRSRSAGRRVPMDLAIEEPTVDEIAKAVQQVGYDAVIEREKTYSREF 60
>gi|116753593|ref|YP_842711.1| ribonucleoprotein complex SRP, Srp19 component [Methanosaeta
thermophila PT]
gi|116665044|gb|ABK14071.1| signal recognition particle, subunit SRP19 (srp19) [Methanosaeta
thermophila PT]
Length = 113
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN-KLYPR 69
+ I+PAY + +++ +GRR+ A AV NP +DI GL +E K YP+
Sbjct: 26 LVIWPAYFDLERSRGQGRRVATANAVRNPKLEDIIRASKDLGLDPVVETEKCYPK 80
>gi|124027006|ref|YP_001012326.1| signal recognition particle protein Srp19 [Hyperthermus butylicus
DSM 5456]
gi|158513940|sp|A2BJ20.1|SRP19_HYPBU RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|123977700|gb|ABM79981.1| Signal recognition particle 19 kDa protein [Hyperthermus
butylicus DSM 5456]
Length = 103
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPR 69
+ ++PA I+ + +EGR+IP AV P ++I + + GL +E YPR
Sbjct: 10 IVLWPANIDSTLSRSEGRKIPLRDAVRKPRVEEIVEAANRLGLNPTVEEAAYPR 63
>gi|297527180|ref|YP_003669204.1| Ribonucleoprotein complex SRP, Srp19 component [Staphylothermus
hellenicus DSM 12710]
gi|297256096|gb|ADI32305.1| Ribonucleoprotein complex SRP, Srp19 component [Staphylothermus
hellenicus DSM 12710]
Length = 95
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREISKEH 75
+ IYP YI+ + GRRIP+ AV P ++I + GL E YP K
Sbjct: 10 IVIYPQYIDSTIPRSRGRRIPRNLAVSKPKIEEIIKAANELGLNPQYEESAYP----KYW 65
Query: 76 FVRGRARV 83
+++GR V
Sbjct: 66 WMKGRVIV 73
>gi|452207809|ref|YP_007487931.1| signal recognition particle 19K protein [Natronomonas moolapensis
8.8.11]
gi|452083909|emb|CCQ37236.1| signal recognition particle 19K protein [Natronomonas moolapensis
8.8.11]
Length = 92
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 18 IYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEHF 76
I+PAY++ + + EGRR+ + AV +PT +I + G I+ ++ YPRE
Sbjct: 6 IWPAYLDAECSRNEGRRVAEDLAVPDPTVDEIASAVQQVGYDAVIDRDRAYPREYEP--- 62
Query: 77 VRGRARVQLKND 88
RGR V+ +D
Sbjct: 63 -RGRVVVRGADD 73
>gi|448407637|ref|ZP_21573832.1| ribonucleoprotein complex SRP, Srp19 component [Halosimplex
carlsbadense 2-9-1]
gi|445674887|gb|ELZ27422.1| ribonucleoprotein complex SRP, Srp19 component [Halosimplex
carlsbadense 2-9-1]
Length = 92
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 18 IYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKL-YPREISKEHF 76
I+PA ++ T +EGRR+ + AV PT +I + G IE + YPRE
Sbjct: 6 IWPAALDASCTRSEGRRVARDLAVPEPTVDEIAQAVQQVGYDAVIERDMTYPREYEP--- 62
Query: 77 VRGRARVQLKND 88
RGR V+ +D
Sbjct: 63 -RGRVLVKDADD 73
>gi|300711005|ref|YP_003736819.1| signal recognition particle 19 kDa protein [Halalkalicoccus
jeotgali B3]
gi|448296900|ref|ZP_21486950.1| signal recognition particle 19 kDa protein [Halalkalicoccus
jeotgali B3]
gi|299124688|gb|ADJ15027.1| signal recognition particle 19 kDa protein [Halalkalicoccus
jeotgali B3]
gi|445580577|gb|ELY34955.1| signal recognition particle 19 kDa protein [Halalkalicoccus
jeotgali B3]
Length = 92
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PAY++ + + + GRR+P AV PT +I G IE + YPRE
Sbjct: 5 VIWPAYLDAEVSRSAGRRVPLDLAVPEPTVDEIAAAAQQVGYDAVIERERTYPREYEP-- 62
Query: 76 FVRGRARVQLKNDDGSPVN 94
R RV +K+ D + N
Sbjct: 63 ----RGRVLVKDADDASKN 77
>gi|158512703|sp|A0B5U7.2|SRP19_METTP RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
Length = 93
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN-KLYPR 69
+ I+PAY + +++ +GRR+ A AV NP +DI GL +E K YP+
Sbjct: 6 LVIWPAYFDLERSRGQGRRVATANAVRNPKLEDIIRASKDLGLDPVVETEKCYPK 60
>gi|20089190|ref|NP_615265.1| signal recognition particle protein Srp19 [Methanosarcina
acetivorans C2A]
gi|19914064|gb|AAM03745.1| signal recognition particle, 19 kDa protein [Methanosarcina
acetivorans C2A]
Length = 103
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
+ I+PAYI++ ++ + GR I + AV P +I D GL +E K YP+
Sbjct: 9 LVIWPAYIDQTRSRSNGRIISRKNAVKEPHLNEIKDAAKNLGLNPEVEPEKAYPK 63
>gi|23396863|sp|Q8TTY3.2|SRP19_METAC RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
Length = 101
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
+ I+PAYI++ ++ + GR I + AV P +I D GL +E K YP+
Sbjct: 7 LVIWPAYIDQTRSRSNGRIISRKNAVKEPHLNEIKDAAKNLGLNPEVEPEKAYPK 61
>gi|448309476|ref|ZP_21499334.1| Signal recognition particle 19 kDa protein [Natronorubrum
bangense JCM 10635]
gi|445589899|gb|ELY44122.1| Signal recognition particle 19 kDa protein [Natronorubrum
bangense JCM 10635]
Length = 93
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PAY++ + AEGRR+ + AV+ P +I + G IE +K Y RE +
Sbjct: 5 VIWPAYLDAGLSRAEGRRVSQELAVEEPAVDEIAKAVQQIGYDATIERDKSYSREPWAD- 63
Query: 76 FVRGRARVQLKNDDGSPVN 94
R RV ++ D S N
Sbjct: 64 ----RGRVVVRGADDSTKN 78
>gi|257388829|ref|YP_003178602.1| ribonucleoprotein complex SRP, Srp19 component [Halomicrobium
mukohataei DSM 12286]
gi|257171136|gb|ACV48895.1| Ribonucleoprotein complex SRP, Srp19 component [Halomicrobium
mukohataei DSM 12286]
Length = 92
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PA ++ + EGRR+ + +AV PT +I + G IE K YPR E+
Sbjct: 5 VIWPAALDAALSRNEGRRVSREQAVPEPTVDEIAKAVQQVGYDAVIEREKTYPR----EY 60
Query: 76 FVRGRARVQLKND 88
RGR V+ +D
Sbjct: 61 EPRGRVLVKDADD 73
>gi|268323290|emb|CBH36878.1| probable signal recognition particle 19 kDa protein [uncultured
archaeon]
Length = 99
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
+ I+PAY+ +T EGR++ + AV +P ++I+ V L+ +E K YP+
Sbjct: 5 MVIWPAYLAVGRTRKEGRKVSRKNAVKSPKVEEIEQVARLLKLEPEVEIEKAYPK 59
>gi|46242591|gb|AAS83413.1| signal recognition particle protein SRP19 [Trypanosoma brucei]
Length = 152
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTG 57
D + IYP Y++ + T +GRR+ + +AVD+PT K++ + L G
Sbjct: 9 DKRAYQTIYPQYLDAELTPHDGRRLTRTQAVDDPTTKEVVEALKELG 55
>gi|429216305|ref|YP_007174295.1| signal recognition particle 19 kDa protein [Caldisphaera
lagunensis DSM 15908]
gi|429132834|gb|AFZ69846.1| signal recognition particle 19 kDa protein [Caldisphaera
lagunensis DSM 15908]
Length = 96
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 18 IYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPR 69
I+P YI+ + GR+I K KAV P+ ++I + G +E K YPR
Sbjct: 9 IWPCYIDSAISKNNGRKISKGKAVLKPSIEEIINAAKKLGFNAVVEEKKYPR 60
>gi|409095956|ref|ZP_11215980.1| signal recognition particle protein Srp19 [Thermococcus zilligii
AN1]
Length = 110
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE---NKLYPR 69
++P+ ++ + + GR +PK AVD+P++ +++D L G+K IE KL PR
Sbjct: 5 VVWPSELDGRLSRKYGRLVPKTMAVDSPSFSELEDALPALGVKI-IEKDHTKLNPR 59
>gi|448351691|ref|ZP_21540485.1| Signal recognition particle 19 kDa protein [Natrialba taiwanensis
DSM 12281]
gi|448362447|ref|ZP_21551055.1| Signal recognition particle 19 kDa protein [Natrialba asiatica
DSM 12278]
gi|448364746|ref|ZP_21553323.1| Signal recognition particle 19 kDa protein [Natrialba aegyptia
DSM 13077]
gi|445632251|gb|ELY85463.1| Signal recognition particle 19 kDa protein [Natrialba taiwanensis
DSM 12281]
gi|445648301|gb|ELZ01260.1| Signal recognition particle 19 kDa protein [Natrialba asiatica
DSM 12278]
gi|445657585|gb|ELZ10410.1| Signal recognition particle 19 kDa protein [Natrialba aegyptia
DSM 13077]
Length = 93
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
I+PAY++ + A+GRR+ + AV+ P+ +I + G IE +K Y RE +
Sbjct: 5 VIWPAYLDVALSRADGRRVSEDLAVEEPSVDEIAKAVQQIGYDATIERDKAYSREPWAD- 63
Query: 76 FVRGRARVQLKND 88
RGR V+ +D
Sbjct: 64 --RGRVVVRGADD 74
>gi|452210132|ref|YP_007490246.1| Signal recognition particle SEC65 subunit [Methanosarcina mazei
Tuc01]
gi|452100034|gb|AGF96974.1| Signal recognition particle SEC65 subunit [Methanosarcina mazei
Tuc01]
Length = 102
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKE 74
+ I+PAYI++ K+ + GR I + ++ P +I + GL +E K YP+ +
Sbjct: 8 LVIWPAYIDQTKSRSSGRIISRKNSIKEPHLNEIKEAARQLGLNPEVEPEKAYPKSWWE- 66
Query: 75 HFVRGRARVQLKNDDGSP 92
V GR V DD P
Sbjct: 67 --VSGRVLV----DDNGP 78
>gi|336477627|ref|YP_004616768.1| Ribonucleoprotein complex SRP, Srp19 component [Methanosalsum
zhilinae DSM 4017]
gi|335931008|gb|AEH61549.1| Ribonucleoprotein complex SRP, Srp19 component [Methanosalsum
zhilinae DSM 4017]
Length = 98
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
+ I+P+YI++ K+ ++GR I K K++ +P +I+ + L +E +K YP+
Sbjct: 9 LVIWPSYIDKSKSRSKGRIISKKKSIKDPQLTEIETAAAKLDLHPEVEADKRYPK 63
>gi|159040951|ref|YP_001540203.1| ribonucleoprotein complex SRP, Srp19 component [Caldivirga
maquilingensis IC-167]
gi|229558604|sp|A8MBC3.1|SRP19_CALMQ RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|157919786|gb|ABW01213.1| Ribonucleoprotein complex SRP, Srp19 component [Caldivirga
maquilingensis IC-167]
Length = 100
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY--HIENKLYPREIS 72
WV ++ I+ + + GR +P+ AVD PT ++I S GLKY H E K +PR
Sbjct: 7 WV-VWRINIDSTVSRSNGRVVPRQLAVDKPTLEEIAKAASMLGLKYEAHPEKK-HPRHWF 64
Query: 73 KEHFV 77
+E +V
Sbjct: 65 EEDYV 69
>gi|289597086|ref|YP_003483782.1| ribonucleoprotein complex SRP, Srp19 component [Aciduliprofundum
boonei T469]
gi|289534873|gb|ADD09220.1| Ribonucleoprotein complex SRP, Srp19 component [Aciduliprofundum
boonei T469]
Length = 87
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKE 74
V IYPAY N + +GRR+PK A D P + I G + IE +K YPR E
Sbjct: 3 VIIYPAYFNIHYSRKQGRRVPKNLAFD-PKLETIAKAARELGYEVEIEPDKRYPRFWWSE 61
Query: 75 HFVRGRARVQLKNDD 89
R R+ + D+
Sbjct: 62 -----RGRIIIDTDE 71
>gi|297619443|ref|YP_003707548.1| Ribonucleoprotein complex SRP, Srp19 component [Methanococcus
voltae A3]
gi|297378420|gb|ADI36575.1| Ribonucleoprotein complex SRP, Srp19 component [Methanococcus
voltae A3]
Length = 96
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 18 IYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY-HIENKLYPREISKEHF 76
I+PAY + + + ++GR++ K N K+I + G Y + +K YP+E + +
Sbjct: 8 IWPAYFDVQNSRSKGRKLNKEFCTRNVKLKEIVSAVKKLGYSYEQVNSKAYPKEPWENN- 66
Query: 77 VRGRARVQLKNDDGSPV 93
G +V+++N + S +
Sbjct: 67 --GYVKVKIENSENSTI 81
>gi|21227659|ref|NP_633581.1| signal recognition particle protein Srp19 [Methanosarcina mazei
Go1]
gi|23396862|sp|Q8PWM7.1|SRP19_METMA RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|20906051|gb|AAM31253.1| Signal recognition particle SEC65 subunit [Methanosarcina mazei
Go1]
Length = 101
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKE 74
+ I+PAYI++ K+ + GR I + ++ P +I + GL +E K YP+ +
Sbjct: 7 LVIWPAYIDQTKSRSSGRIISRKNSIKEPHLNEIKEAARQLGLNPEVEPEKAYPKSWWE- 65
Query: 75 HFVRGRARVQLKNDDGSP 92
V GR V DD P
Sbjct: 66 --VSGRVLV----DDNGP 77
>gi|358056768|dbj|GAA97431.1| hypothetical protein E5Q_04109 [Mixia osmundae IAM 14324]
Length = 277
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 13 ERWVCIYPAYINRKKTLAEG-RRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPRE 70
+RW +YP Y + + G RR+P AV P D+ + GL+ +E ++ +PRE
Sbjct: 97 KRWTSLYPIYFDAARPRKGGQRRVPLNSAVWYPHATDVANAAHKLGLRCVLEPDRFHPRE 156
Query: 71 ISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALI 111
GR +V L ++G +P + ++L + A++
Sbjct: 157 WENP----GRVKV-LVTENGKFAHPVIRQKHDLLLKVAAVM 192
>gi|14600956|ref|NP_147482.1| signal recognition particle 19 kDa protein [Aeropyrum pernix K1]
gi|12230646|sp|Q9YDZ7.1|SRP19_AERPE RecName: Full=Signal recognition particle 19 kDa protein;
Short=SRP19
gi|5104435|dbj|BAA79750.1| signal recognition particle 19 kDa protein [Aeropyrum pernix K1]
Length = 112
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPR 69
+ ++PAY + GRR+P+ V +P +D+ + G + +E YPR
Sbjct: 18 IILWPAYFDSTLPRRLGRRVPRDMGVPSPKPEDVAEAARRAGFEAVVEESSYPR 71
>gi|448419971|ref|ZP_21580781.1| signal recognition particle, subunit srp19 (srp19) [Halosarcina
pallida JCM 14848]
gi|445674139|gb|ELZ26684.1| signal recognition particle, subunit srp19 (srp19) [Halosarcina
pallida JCM 14848]
Length = 91
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKL-YPREISKEH 75
I+P Y++ + + + GRR+P AV PT +I + + G IE + +PRE
Sbjct: 4 VIWPRYLDAEMSRSAGRRVPLDDAVVEPTIDEIAEAVQQIGYDAVIERDVRHPREWET-- 61
Query: 76 FVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGAL 110
R RV +K + S N +AV ++G L
Sbjct: 62 ----RGRVVVKGAEDSTKN---DLVQAVAAYVGIL 89
>gi|213405775|ref|XP_002173659.1| signal recognition particle sec65 subunit [Schizosaccharomyces
japonicus yFS275]
gi|212001706|gb|EEB07366.1| signal recognition particle sec65 subunit [Schizosaccharomyces
japonicus yFS275]
Length = 202
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 16 VCIYPAYINRKKTLAEG-RRIPKAKAVDNPTYKDIDDVLSTTGLK 59
V +YP Y +R T +G RR+PK A++NP K+I DV+ G K
Sbjct: 2 VVLYPIYFDR--TRPKGLRRVPKELAIENPLAKNIGDVVYKLGYK 44
>gi|71749108|ref|XP_827893.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70833277|gb|EAN78781.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 152
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTG 57
D + IYP Y++ + T +GRR+ + +AVD+PT ++ + L G
Sbjct: 9 DKRAYQTIYPQYLDAELTPHDGRRLTRTQAVDDPTTNEVVEALKELG 55
>gi|325570277|ref|ZP_08146143.1| penicillin-binding protein 1A [Enterococcus casseliflavus ATCC
12755]
gi|325156760|gb|EGC68934.1| penicillin-binding protein 1A [Enterococcus casseliflavus ATCC
12755]
Length = 776
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 6 TKKHTD--VERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYH 61
T K TD V W Y I + LAE R +P K D +I D LS G++YH
Sbjct: 428 TYKGTDIPVYNWDRQYMGNITLRTALAESRNVPAVKLFDEVGANNIADFLSGLGIEYH 485
>gi|440491807|gb|ELQ74415.1| Signal recognition particle, subunit Srp19 [Trachipleistophora
hominis]
Length = 131
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 18 IYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIEN-KLYPR 69
+YP +IN + GR+ K NPT ++++ + GL++ +E K++P+
Sbjct: 6 VYPCHINAALSHKHGRKYNKTLCTSNPTIQEMEKAAAALGLQFTVEEKKIHPK 58
>gi|420263237|ref|ZP_14765875.1| penicillin-binding protein 1A [Enterococcus sp. C1]
gi|394769525|gb|EJF49370.1| penicillin-binding protein 1A [Enterococcus sp. C1]
Length = 773
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 6 TKKHTD--VERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYH 61
T K TD V W Y I + LAE R +P K D +I D LS G++YH
Sbjct: 425 TYKGTDIPVYNWDRQYMGNITLRTALAESRNVPAVKLFDEVGADNIADFLSGLGIEYH 482
>gi|88603724|ref|YP_503902.1| ribonucleoprotein complex SRP, Srp19 component [Methanospirillum
hungatei JF-1]
gi|88189186|gb|ABD42183.1| signal recognition particle, subunit SRP19 (srp19)
[Methanospirillum hungatei JF-1]
Length = 93
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYP 68
V +YP Y + + +EGRR+ V +P DI+ +L + + E+K +P
Sbjct: 5 VKLYPCYFDSELMRSEGRRVSHDTGVAHPEPGDIERILKANKIPFTRESKCHP 57
>gi|374725243|gb|EHR77323.1| signal recognition particle subunit SRP19 [uncultured marine group
II euryarchaeote]
Length = 152
Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 16 VCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYPREISKEH 75
+C++P Y + + + GRR+PK +V P + + GLK I+ + S+ H
Sbjct: 8 LCVWPGYFDARTSRRSGRRVPKDSSVLKPDLEGLFLAARKLGLK-KIKREERISHPSRPH 66
Query: 76 FVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQ 126
GR V + GS + ++E ++ +GA +++ R+ K+AN+++
Sbjct: 67 QGEGRMWV---SRTGSKQSVGANSKEELLQLIGAQWRQMQ-REQKEANADR 113
>gi|300708064|ref|XP_002996220.1| hypothetical protein NCER_100726 [Nosema ceranae BRL01]
gi|239605501|gb|EEQ82549.1| hypothetical protein NCER_100726 [Nosema ceranae BRL01]
Length = 143
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 15 WVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISK 73
+ +YP Y + K ++EGR+ K V +PT+ +I + L + E +K +PR
Sbjct: 7 FYVLYPVYFDANKKISEGRKYHKNLCVSSPTFLEITNALKYLEIDCTAEIDKRHPR---- 62
Query: 74 EHFVRGRARVQ 84
++F GR ++
Sbjct: 63 DYFRSGRFKIN 73
>gi|307354310|ref|YP_003895361.1| ribonucleoprotein complex SRP, Srp19 component [Methanoplanus
petrolearius DSM 11571]
gi|307157543|gb|ADN36923.1| Ribonucleoprotein complex SRP, Srp19 component [Methanoplanus
petrolearius DSM 11571]
Length = 104
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 18 IYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLYP 68
+YP Y N++ +EGRR+P + + P ++I GL E +P
Sbjct: 21 LYPCYFNKELKRSEGRRVPVSAGITKPDTQNIYKAAKKAGLSARTEESKHP 71
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.135 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,490,324,259
Number of Sequences: 23463169
Number of extensions: 101119668
Number of successful extensions: 233728
Number of sequences better than 100.0: 574
Number of HSP's better than 100.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 232971
Number of HSP's gapped (non-prelim): 613
length of query: 150
length of database: 8,064,228,071
effective HSP length: 113
effective length of query: 37
effective length of database: 9,707,857,270
effective search space: 359190718990
effective search space used: 359190718990
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 71 (32.0 bits)