Your job contains 1 sequence.
>psy6932
MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY
HIENKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK
QANSEQNQQRDLSGGGGGGKKQGLVYLMGY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6932
(150 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0015298 - symbol:Srp19 "Signal recognition particl... 383 1.9e-35 1
ZFIN|ZDB-GENE-040426-2657 - symbol:srp19 "signal recognit... 334 3.0e-30 1
UNIPROTKB|P09132 - symbol:SRP19 "Signal recognition parti... 325 2.7e-29 1
UNIPROTKB|F1RLG4 - symbol:SRP19 "Uncharacterized protein"... 324 3.4e-29 1
UNIPROTKB|Q3ZBG7 - symbol:SRP19 "Signal recognition parti... 321 7.1e-29 1
UNIPROTKB|J9PAS6 - symbol:SRP19 "Uncharacterized protein"... 320 9.1e-29 1
RGD|1308437 - symbol:Srp19 "signal recognition particle 1... 318 1.5e-28 1
MGI|MGI:1913634 - symbol:Srp19 "signal recognition partic... 304 4.5e-27 1
UNIPROTKB|F1NQ53 - symbol:SRP19 "Uncharacterized protein"... 299 1.5e-26 1
WB|WBGene00018159 - symbol:F37F2.2 species:6239 "Caenorha... 250 2.4e-21 1
TAIR|locus:2020895 - symbol:AT1G48160 species:3702 "Arabi... 217 7.5e-18 1
ASPGD|ASPL0000058827 - symbol:AN0643 species:162425 "Emer... 164 3.1e-12 1
DICTYBASE|DDB_G0275211 - symbol:srp19 "signal recognition... 147 2.0e-10 1
GENEDB_PFALCIPARUM|PFL0785c - symbol:PFL0785c "signal rec... 147 2.0e-10 1
UNIPROTKB|Q8I5P4 - symbol:PFL0785c "Signal recognition pa... 147 2.0e-10 1
UNIPROTKB|D6RBG4 - symbol:SRP19 "Signal recognition parti... 123 6.8e-08 1
SGD|S000004573 - symbol:SEC65 "Subunit of the signal reco... 113 2.8e-06 1
CGD|CAL0002482 - symbol:SEC65 species:5476 "Candida albic... 113 2.8e-06 1
UNIPROTKB|Q5A9A9 - symbol:SEC65 "Putative uncharacterized... 113 2.8e-06 1
>FB|FBgn0015298 [details] [associations]
symbol:Srp19 "Signal recognition particle protein 19"
species:7227 "Drosophila melanogaster" [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=ISS]
[GO:0005786 "signal recognition particle, endoplasmic reticulum
targeting" evidence=ISS] [GO:0008312 "7S RNA binding"
evidence=ISS;NAS] InterPro:IPR002778 Pfam:PF01922 EMBL:AE014296
GO:GO:0008312 GO:GO:0006614 GO:GO:0005786 Gene3D:3.30.56.30
PANTHER:PTHR17453 SUPFAM:SSF69695 KO:K03105 OMA:YVAEMIP CTD:6728
eggNOG:NOG265516 GeneTree:ENSGT00390000004950 EMBL:U35682
EMBL:AY089689 RefSeq:NP_477135.2 UniGene:Dm.4799
ProteinModelPortal:P49963 SMR:P49963 MINT:MINT-1656681
STRING:P49963 PaxDb:P49963 EnsemblMetazoa:FBtr0076879 GeneID:38815
KEGG:dme:Dmel_CG4457 FlyBase:FBgn0015298 InParanoid:P49963
OrthoDB:EOG4M6413 PhylomeDB:P49963 GenomeRNAi:38815 NextBio:810515
Bgee:P49963 GermOnline:CG4457 Uniprot:P49963
Length = 160
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 73/126 (57%), Positives = 92/126 (73%)
Query: 8 KHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIENKLY 67
KH D+ERW+CIYPAYINRKKT EGRR+PK VDNP+Y +I DVLS + L++ +ENK Y
Sbjct: 16 KHNDMERWICIYPAYINRKKTRQEGRRLPKENCVDNPSYIEIRDVLSVSNLQFLMENKKY 75
Query: 68 PREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQN 127
RE S E RGR RVQL+N DG+ N DFPTRE++MLH+ + IP+LK+RQ K +S
Sbjct: 76 CRENSSEMEFRGRVRVQLRNVDGTLYNNDFPTRESIMLHIASKIPQLKTRQNKSGDSYHQ 135
Query: 128 QQRDLS 133
Q + S
Sbjct: 136 QSQPQS 141
>ZFIN|ZDB-GENE-040426-2657 [details] [associations]
symbol:srp19 "signal recognition particle 19"
species:7955 "Danio rerio" [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0008312 "7S RNA binding" evidence=IEA] [GO:0048500 "signal
recognition particle" evidence=IEA] InterPro:IPR002778 Pfam:PF01922
ZFIN:ZDB-GENE-040426-2657 GO:GO:0008312 GO:GO:0006614
Gene3D:3.30.56.30 PANTHER:PTHR17453 SUPFAM:SSF69695 KO:K03105
HOGENOM:HOG000237221 CTD:6728 eggNOG:NOG265516
GeneTree:ENSGT00390000004950 HOVERGEN:HBG059463 OrthoDB:EOG48D0WP
GO:GO:0048500 HSSP:P09132 EMBL:CABZ01069193 EMBL:BC053168
IPI:IPI00499750 RefSeq:NP_998508.1 UniGene:Dr.79112 SMR:Q7T3C9
STRING:Q7T3C9 Ensembl:ENSDART00000051776 GeneID:406652
KEGG:dre:406652 InParanoid:Q7T3C9 NextBio:20818187 Uniprot:Q7T3C9
Length = 141
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 69/130 (53%), Positives = 87/130 (66%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + T D ER++CIYPAYIN KKTLAEGRRIP KAV+NPT +I VLS GL
Sbjct: 1 MAYLTTNP-ADKERFLCIYPAYINSKKTLAEGRRIPTDKAVENPTCAEIQGVLSAAGLNV 59
Query: 61 HIENKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGK 120
H+EN +YPRE +++ RGR RVQLK +DGS F +R+ VM ++ +IPKLKSR K
Sbjct: 60 HVENSMYPREWNRDVQFRGRVRVQLKMEDGSFCQDKFTSRKDVMFYVAEMIPKLKSRTQK 119
Query: 121 QANSEQNQQR 130
+E Q+
Sbjct: 120 SGGAEAGAQQ 129
>UNIPROTKB|P09132 [details] [associations]
symbol:SRP19 "Signal recognition particle 19 kDa protein"
species:9606 "Homo sapiens" [GO:0005786 "signal recognition
particle, endoplasmic reticulum targeting" evidence=IDA]
[GO:0042493 "response to drug" evidence=IDA] [GO:0008312 "7S RNA
binding" evidence=IDA] [GO:0006613 "cotranslational protein
targeting to membrane" evidence=TAS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005829 "cytosol" evidence=TAS] [GO:0006412
"translation" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0044267 "cellular
protein metabolic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] Reactome:REACT_71
Reactome:REACT_17015 InterPro:IPR002778 Pfam:PF01922 GO:GO:0005829
GO:GO:0005739 GO:GO:0005730 GO:GO:0042493 GO:GO:0006412
EMBL:CH471086 TCDB:3.A.5.9.1 EMBL:AC008536 GO:GO:0008312
GO:GO:0006614 PDB:1RY1 PDBsum:1RY1 GO:GO:0005786 Gene3D:3.30.56.30
PANTHER:PTHR17453 SUPFAM:SSF69695 KO:K03105 HOGENOM:HOG000237221
OMA:YVAEMIP CTD:6728 eggNOG:NOG265516 HOVERGEN:HBG059463
OrthoDB:EOG48D0WP EMBL:X12791 EMBL:BU661702 EMBL:AK311803
EMBL:AC008575 EMBL:BC010947 EMBL:BC017830 IPI:IPI00295889
IPI:IPI00807414 IPI:IPI00967461 PIR:S01700 RefSeq:NP_001191122.1
RefSeq:NP_001191123.1 RefSeq:NP_001191125.1 RefSeq:NP_003126.1
UniGene:Hs.637001 PDB:1JID PDB:1MFQ PDB:2J37 PDB:3KTV PDBsum:1JID
PDBsum:1MFQ PDBsum:2J37 PDBsum:3KTV ProteinModelPortal:P09132
SMR:P09132 IntAct:P09132 MINT:MINT-247583 STRING:P09132
PhosphoSite:P09132 DMDM:115502457 PaxDb:P09132 PRIDE:P09132
Ensembl:ENST00000282999 Ensembl:ENST00000505459
Ensembl:ENST00000515463 GeneID:6728 KEGG:hsa:6728 UCSC:uc003kqc.3
GeneCards:GC05P112196 HGNC:HGNC:11300 HPA:HPA029272 MIM:182175
neXtProt:NX_P09132 PharmGKB:PA36124 InParanoid:P09132
PhylomeDB:P09132 ChiTaRS:SRP19 EvolutionaryTrace:P09132
GenomeRNAi:6728 NextBio:26244 ArrayExpress:P09132 Bgee:P09132
CleanEx:HS_SRP19 Genevestigator:P09132 GermOnline:ENSG00000153037
Uniprot:P09132
Length = 144
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 65/131 (49%), Positives = 90/131 (68%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R
Sbjct: 61 FLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQ 120
Query: 120 KQANSEQNQQR 130
K ++Q+ Q+
Sbjct: 121 KTGGADQSLQQ 131
>UNIPROTKB|F1RLG4 [details] [associations]
symbol:SRP19 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042493 "response to drug" evidence=IEA] [GO:0008312
"7S RNA binding" evidence=IEA] [GO:0005786 "signal recognition
particle, endoplasmic reticulum targeting" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] InterPro:IPR002778
Pfam:PF01922 GO:GO:0005739 GO:GO:0005730 GO:GO:0042493
GO:GO:0008312 GO:GO:0006614 GO:GO:0005786 Gene3D:3.30.56.30
PANTHER:PTHR17453 SUPFAM:SSF69695 KO:K03105 OMA:YVAEMIP
GeneTree:ENSGT00390000004950 EMBL:CU856120 RefSeq:XP_003480936.1
Ensembl:ENSSSCT00000032409 GeneID:100517270 KEGG:ssc:100517270
Uniprot:F1RLG4
Length = 144
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 65/131 (49%), Positives = 89/131 (67%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R
Sbjct: 61 FLEKNKMYSREWNRDLQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQ 120
Query: 120 KQANSEQNQQR 130
K +Q+ Q+
Sbjct: 121 KTGGGDQSLQQ 131
>UNIPROTKB|Q3ZBG7 [details] [associations]
symbol:SRP19 "Signal recognition particle 19 kDa protein"
species:9913 "Bos taurus" [GO:0042493 "response to drug"
evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0005786 "signal recognition particle, endoplasmic reticulum
targeting" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
InterPro:IPR002778 Pfam:PF01922 GO:GO:0005739 GO:GO:0005730
GO:GO:0042493 GO:GO:0008312 GO:GO:0006614 GO:GO:0005786
Gene3D:3.30.56.30 PANTHER:PTHR17453 SUPFAM:SSF69695 KO:K03105
HOGENOM:HOG000237221 OMA:YVAEMIP EMBL:BC103304 IPI:IPI00700442
RefSeq:NP_001029650.1 UniGene:Bt.49410 ProteinModelPortal:Q3ZBG7
SMR:Q3ZBG7 STRING:Q3ZBG7 PRIDE:Q3ZBG7 Ensembl:ENSBTAT00000017007
GeneID:514960 KEGG:bta:514960 CTD:6728 eggNOG:NOG265516
GeneTree:ENSGT00390000004950 HOVERGEN:HBG059463 InParanoid:Q3ZBG7
OrthoDB:EOG48D0WP NextBio:20871593 Uniprot:Q3ZBG7
Length = 144
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 64/131 (48%), Positives = 89/131 (67%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV + GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCAAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R
Sbjct: 61 FLEKNKMYSREWNRDLQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQ 120
Query: 120 KQANSEQNQQR 130
K +Q+ Q+
Sbjct: 121 KTGGGDQSLQQ 131
>UNIPROTKB|J9PAS6 [details] [associations]
symbol:SRP19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048500 "signal recognition particle"
evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] InterPro:IPR002778 Pfam:PF01922
GO:GO:0008312 GO:GO:0006614 Gene3D:3.30.56.30 PANTHER:PTHR17453
SUPFAM:SSF69695 KO:K03105 OMA:YVAEMIP CTD:6728
GeneTree:ENSGT00390000004950 GO:GO:0048500 EMBL:AAEX03001951
RefSeq:NP_001239220.1 ProteinModelPortal:J9PAS6
Ensembl:ENSCAFT00000047116 GeneID:606764 KEGG:cfa:606764
Uniprot:J9PAS6
Length = 144
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 64/131 (48%), Positives = 89/131 (67%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + + +R++CIYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPAEQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNV 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML+ +IPKLK+R
Sbjct: 61 FLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTRTQ 120
Query: 120 KQANSEQNQQR 130
K +Q+ Q+
Sbjct: 121 KTGGGDQSLQQ 131
>RGD|1308437 [details] [associations]
symbol:Srp19 "signal recognition particle 19" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=IEA;ISO] [GO:0006614 "SRP-dependent cotranslational
protein targeting to membrane" evidence=IEA] [GO:0008312 "7S RNA
binding" evidence=IEA;ISO] [GO:0042493 "response to drug"
evidence=IEA;ISO] InterPro:IPR002778 Pfam:PF01922 RGD:1308437
GO:GO:0005739 GO:GO:0005730 GO:GO:0042493 GO:GO:0008312
GO:GO:0006614 EMBL:CH473974 GO:GO:0005786 Gene3D:3.30.56.30
PANTHER:PTHR17453 SUPFAM:SSF69695 KO:K03105 HOGENOM:HOG000237221
OMA:YVAEMIP CTD:6728 eggNOG:NOG265516 GeneTree:ENSGT00390000004950
HOVERGEN:HBG059463 OrthoDB:EOG48D0WP EMBL:BC167043 IPI:IPI00363293
RefSeq:NP_001099627.1 UniGene:Rn.116072 SMR:B2RZ66 STRING:B2RZ66
Ensembl:ENSRNOT00000027418 GeneID:291685 KEGG:rno:291685
UCSC:RGD:1308437 NextBio:633019 Genevestigator:B2RZ66
Uniprot:B2RZ66
Length = 144
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 64/131 (48%), Positives = 89/131 (67%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++CIYPAY+N KKT+AEGRRIP KAV+NPT +I DV S GL
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPINKAVENPTATEIQDVCSAVGLNA 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML++ +IPKLK+R
Sbjct: 61 FLEKNKMYSREWNRDVQYRGRVRVQLKQEDGSLCLVQFPSRKSVMLYVAEMIPKLKTRTQ 120
Query: 120 KQANSEQNQQR 130
K ++ + Q+
Sbjct: 121 KSGGADPSLQQ 131
>MGI|MGI:1913634 [details] [associations]
symbol:Srp19 "signal recognition particle 19" species:10090
"Mus musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005786 "signal recognition particle, endoplasmic reticulum
targeting" evidence=ISO] [GO:0006614 "SRP-dependent cotranslational
protein targeting to membrane" evidence=IEA] [GO:0008312 "7S RNA
binding" evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0042493 "response to drug" evidence=ISO]
[GO:0048500 "signal recognition particle" evidence=IEA]
InterPro:IPR002778 Pfam:PF01922 MGI:MGI:1913634 GO:GO:0008312
GO:GO:0006614 GO:GO:0005786 Gene3D:3.30.56.30 PANTHER:PTHR17453
SUPFAM:SSF69695 HOGENOM:HOG000237221 eggNOG:NOG265516
HOVERGEN:HBG059463 OrthoDB:EOG48D0WP EMBL:AK009412 IPI:IPI00110096
UniGene:Mm.29452 ProteinModelPortal:Q9D7A6 SMR:Q9D7A6 STRING:Q9D7A6
PhosphoSite:Q9D7A6 PaxDb:Q9D7A6 PRIDE:Q9D7A6 InParanoid:Q9D7A6
CleanEx:MM_SRP19 Genevestigator:Q9D7A6
GermOnline:ENSMUSG00000014504 Uniprot:Q9D7A6
Length = 144
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 62/126 (49%), Positives = 86/126 (68%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
MA + D +R++ IYPAY+N KKT+AEGRRIP +KAV+NPT +I DV S GL
Sbjct: 1 MACSAARPPADQDRFIFIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNA 60
Query: 61 HIE-NKLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQG 119
+E NK+Y RE +++ RGR RVQLK +DGS FP+R++VML++ +IPKLK+R
Sbjct: 61 FLEKNKMYSREWNRDVQFRGRVRVQLKQEDGSLCLVQFPSRKSVMLYVAEMIPKLKTRTQ 120
Query: 120 KQANSE 125
K ++
Sbjct: 121 KSGGAD 126
>UNIPROTKB|F1NQ53 [details] [associations]
symbol:SRP19 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005786
"signal recognition particle, endoplasmic reticulum targeting"
evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] InterPro:IPR002778
Pfam:PF01922 GO:GO:0005739 GO:GO:0005730 GO:GO:0042493
GO:GO:0008312 GO:GO:0006614 GO:GO:0005786 Gene3D:3.30.56.30
PANTHER:PTHR17453 SUPFAM:SSF69695 OMA:YVAEMIP
GeneTree:ENSGT00390000004950 EMBL:AADN02056155 EMBL:AADN02056156
IPI:IPI00814391 Ensembl:ENSGALT00000000294 Uniprot:F1NQ53
Length = 145
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 60/115 (52%), Positives = 80/115 (69%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
C+ AY+N KKT+AEGRRIP KAV+NPT +I DV + G +E NK+YPRE +++
Sbjct: 20 CV--AYLNNKKTIAEGRRIPIDKAVENPTSTEIQDVCAAVGFNVLLEKNKMYPREWNRDV 77
Query: 76 FVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQR 130
RGR R+QLK DDG+P P FPTR++VML+ IPKLK+R K S+Q+ Q+
Sbjct: 78 QYRGRVRIQLKQDDGNPCLPQFPTRKSVMLYAAETIPKLKTRTQKMGGSDQSLQQ 132
>WB|WBGene00018159 [details] [associations]
symbol:F37F2.2 species:6239 "Caenorhabditis elegans"
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0048500 "signal recognition particle" evidence=IEA]
InterPro:IPR002778 Pfam:PF01922 GO:GO:0008312 GO:GO:0006614
eggNOG:COG1400 GO:GO:0005786 Gene3D:3.30.56.30 PANTHER:PTHR17453
SUPFAM:SSF69695 KO:K03105 HOGENOM:HOG000237221
GeneTree:ENSGT00390000004950 EMBL:FO081321 PIR:T33052
RefSeq:NP_490855.2 UniGene:Cel.18747 ProteinModelPortal:O61749
SMR:O61749 STRING:O61749 PaxDb:O61749 EnsemblMetazoa:F37F2.2.2
GeneID:171711 KEGG:cel:CELE_F37F2.2 UCSC:F37F2.2 CTD:171711
WormBase:F37F2.2 InParanoid:O61749 OMA:IVIYPAY NextBio:872391
Uniprot:O61749
Length = 160
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 51/119 (42%), Positives = 78/119 (65%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKY 60
M ++ ++ + +RW+ IYPAYI++KKT +GR+I + AV+NPT +I DVL+ G
Sbjct: 1 MTSVASEPLSSQKRWIVIYPAYIDKKKTAKQGRKISQILAVENPTSVEIHDVLAAVGFNP 60
Query: 61 HIEN-KLYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQ 118
+E K YPR+ ++ V+GR RVQLKNDDG+ + TR+ + + +IPKLK+RQ
Sbjct: 61 LLERTKCYPRDGERDFEVQGRVRVQLKNDDGTAKHEQ-KTRDEIFKMVAEMIPKLKTRQ 118
>TAIR|locus:2020895 [details] [associations]
symbol:AT1G48160 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=ISS] [GO:0006605 "protein targeting" evidence=ISS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] [GO:0008312 "7S RNA binding"
evidence=IEA;ISS] [GO:0048500 "signal recognition particle"
evidence=IEA] InterPro:IPR002778 Pfam:PF01922 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC023673 GO:GO:0008312 GO:GO:0006614
eggNOG:COG1400 GO:GO:0005786 Gene3D:3.30.56.30 PANTHER:PTHR17453
SUPFAM:SSF69695 KO:K03105 EMBL:AF439847 EMBL:AY125568 EMBL:AY088346
IPI:IPI00535966 RefSeq:NP_175250.1 UniGene:At.15219
UniGene:At.48287 ProteinModelPortal:Q943Z6 SMR:Q943Z6 STRING:Q943Z6
PaxDb:Q943Z6 PRIDE:Q943Z6 EnsemblPlants:AT1G48160.1 GeneID:841235
KEGG:ath:AT1G48160 TAIR:At1g48160 HOGENOM:HOG000237221
InParanoid:Q943Z6 OMA:YVAEMIP PhylomeDB:Q943Z6
ProtClustDB:CLSN2682190 Genevestigator:Q943Z6 GermOnline:AT1G48160
Uniprot:Q943Z6
Length = 145
Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 47/120 (39%), Positives = 71/120 (59%)
Query: 11 DVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPR 69
++++WV IYP YIN KKT+AEGRRI +K+ +NP +I D L +E +K YPR
Sbjct: 7 NIKKWVVIYPVYINSKKTVAEGRRISVSKSCENPNCIEISDCCKHLKLPSAVEIDKAYPR 66
Query: 70 EISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKSRQGKQANSEQNQQ 129
+ + GR RVQLK +DG+ +NP +R+ +M + L+P+ R KQ + +Q
Sbjct: 67 DFMQV----GRVRVQLKREDGTLLNPAITSRKHLMQKIAELVPRHPERVKKQEAQKAKKQ 122
>ASPGD|ASPL0000058827 [details] [associations]
symbol:AN0643 species:162425 "Emericella nidulans"
[GO:0006617 "SRP-dependent cotranslational protein targeting to
membrane, signal sequence recognition" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005786 "signal recognition particle,
endoplasmic reticulum targeting" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
InterPro:IPR002778 Pfam:PF01922 EMBL:BN001308 GO:GO:0008312
GO:GO:0006614 eggNOG:COG1400 HOGENOM:HOG000203373 OrthoDB:EOG4B2X69
Gene3D:3.30.56.30 PANTHER:PTHR17453 SUPFAM:SSF69695 KO:K03105
GO:GO:0048500 EMBL:AACD01000009 RefSeq:XP_658247.1
ProteinModelPortal:Q5BFN7 STRING:Q5BFN7
EnsemblFungi:CADANIAT00002033 GeneID:2876421 KEGG:ani:AN0643.2
OMA:QCLYPVY Uniprot:Q5BFN7
Length = 257
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 39/102 (38%), Positives = 59/102 (57%)
Query: 17 CIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE-NKLYPREISKEH 75
C+YP Y ++ +T AEGR++ AV+NP +DI D + GL+ E KL+P++ +
Sbjct: 61 CLYPVYFDKTRTRAEGRKVGTELAVENPLARDIVDAVQMLGLRVGFEPEKLHPKDWANP- 119
Query: 76 FVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPK-LKS 116
GR RVQLK+++G PVN + HL LI + LK+
Sbjct: 120 ---GRVRVQLKDENGEPVNSQIKNKH----HLYILIAQYLKA 154
>DICTYBASE|DDB_G0275211 [details] [associations]
symbol:srp19 "signal recognition particle 19 kDa
subunit" species:44689 "Dictyostelium discoideum" [GO:0048500
"signal recognition particle" evidence=IEA] [GO:0008312 "7S RNA
binding" evidence=IEA] [GO:0006614 "SRP-dependent cotranslational
protein targeting to membrane" evidence=IEA;ISS] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR002778 Pfam:PF01922
dictyBase:DDB_G0275211 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0008312 GO:GO:0006614 GO:GO:0005786 Gene3D:3.30.56.30
PANTHER:PTHR17453 SUPFAM:SSF69695 KO:K03105 eggNOG:NOG265516
RefSeq:XP_643744.1 HSSP:Q58440 ProteinModelPortal:Q554G7
STRING:Q554G7 EnsemblProtists:DDB0232381 GeneID:8619788
KEGG:ddi:DDB_G0275211 OMA:GYPKEFF Uniprot:Q554G7
Length = 178
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 36/122 (29%), Positives = 60/122 (49%)
Query: 4 IDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE 63
+D ++W +YP +IN + T +GR++ K V NPT +I + + GL IE
Sbjct: 9 VDVSTIPGFKKWYIVYPNHINSELTKEKGRKVSKEHGVKNPTLPEIAEATAQLGLPCIIE 68
Query: 64 -NKLYPREISKEHFVRGRARVQLKNDDGS-PVNPDFPTREAVMLHLGALIPKLKSRQGKQ 121
+K YP KE F+RGR R+ D + P NP P + +++ + I + + +
Sbjct: 69 TSKGYP----KEFFLRGRLRINFFCDGTTMPRNPHIPNKTVLLVKIAERIKLINPNRPEP 124
Query: 122 AN 123
N
Sbjct: 125 FN 126
>GENEDB_PFALCIPARUM|PFL0785c [details] [associations]
symbol:PFL0785c "signal recognition particle 19
kd protein, putative" species:5833 "Plasmodium falciparum"
[GO:0006617 "SRP-dependent cotranslational protein targeting to
membrane, signal sequence recognition" evidence=ISS]
InterPro:IPR002778 Pfam:PF01922 EMBL:AE014188 GO:GO:0008312
GO:GO:0006617 Gene3D:3.30.56.30 PANTHER:PTHR17453 SUPFAM:SSF69695
KO:K03105 HOGENOM:HOG000237221 GO:GO:0048500 RefSeq:XP_001350566.1
HSSP:P09132 ProteinModelPortal:Q8I5P4 EnsemblProtists:PFL0785c:mRNA
GeneID:811210 KEGG:pfa:PFL0785c EuPathDB:PlasmoDB:PF3D7_1216300
OMA:NEGRRIN ProtClustDB:CLSZ2432389 Uniprot:Q8I5P4
Length = 152
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 40/115 (34%), Positives = 57/115 (49%)
Query: 3 TIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI 62
TID K D RW IYP Y+N+KK + EGRRI V +PT +I + Y I
Sbjct: 25 TIDESK--DYSRWKIIYPNYLNKKKKVNEGRRINLKYCVSDPTVDEIALACKELNVSYVI 82
Query: 63 ENK-LYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKS 116
E K YPR+ + GR R++L N + +N F + + L L + ++S
Sbjct: 83 EKKKYYPRD----WLIEGRIRIKLPNQNNDILNK-FELMKKIGLKLQTIKVNVES 132
>UNIPROTKB|Q8I5P4 [details] [associations]
symbol:PFL0785c "Signal recognition particle SRP19,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0006617
"SRP-dependent cotranslational protein targeting to membrane,
signal sequence recognition" evidence=ISS] InterPro:IPR002778
Pfam:PF01922 EMBL:AE014188 GO:GO:0008312 GO:GO:0006617
Gene3D:3.30.56.30 PANTHER:PTHR17453 SUPFAM:SSF69695 KO:K03105
HOGENOM:HOG000237221 GO:GO:0048500 RefSeq:XP_001350566.1
HSSP:P09132 ProteinModelPortal:Q8I5P4 EnsemblProtists:PFL0785c:mRNA
GeneID:811210 KEGG:pfa:PFL0785c EuPathDB:PlasmoDB:PF3D7_1216300
OMA:NEGRRIN ProtClustDB:CLSZ2432389 Uniprot:Q8I5P4
Length = 152
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 40/115 (34%), Positives = 57/115 (49%)
Query: 3 TIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI 62
TID K D RW IYP Y+N+KK + EGRRI V +PT +I + Y I
Sbjct: 25 TIDESK--DYSRWKIIYPNYLNKKKKVNEGRRINLKYCVSDPTVDEIALACKELNVSYVI 82
Query: 63 ENK-LYPREISKEHFVRGRARVQLKNDDGSPVNPDFPTREAVMLHLGALIPKLKS 116
E K YPR+ + GR R++L N + +N F + + L L + ++S
Sbjct: 83 EKKKYYPRD----WLIEGRIRIKLPNQNNDILNK-FELMKKIGLKLQTIKVNVES 132
>UNIPROTKB|D6RBG4 [details] [associations]
symbol:SRP19 "Signal recognition particle 19 kDa protein"
species:9606 "Homo sapiens" [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0008312 "7S RNA binding" evidence=IEA] [GO:0048500 "signal
recognition particle" evidence=IEA] InterPro:IPR002778 Pfam:PF01922
EMBL:AC008536 GO:GO:0008312 GO:GO:0006614 Gene3D:3.30.56.30
PANTHER:PTHR17453 SUPFAM:SSF69695 EMBL:AC008575 HGNC:HGNC:11300
ChiTaRS:SRP19 GO:GO:0048500 IPI:IPI00967730
ProteinModelPortal:D6RBG4 SMR:D6RBG4 Ensembl:ENST00000506997
HOGENOM:HOG000185952 ArrayExpress:D6RBG4 Bgee:D6RBG4 Uniprot:D6RBG4
Length = 43
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 1 MATIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAV 41
MA + D +R++CIYPAY+N KKT+AEGRRIP +K +
Sbjct: 1 MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKCL 41
>SGD|S000004573 [details] [associations]
symbol:SEC65 "Subunit of the signal recognition particle
(SRP)" species:4932 "Saccharomyces cerevisiae" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005786 "signal recognition particle,
endoplasmic reticulum targeting" evidence=IEA;ISS;IMP;IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0006617
"SRP-dependent cotranslational protein targeting to membrane,
signal sequence recognition" evidence=IMP] [GO:0045047 "protein
targeting to ER" evidence=IMP] [GO:0008312 "7S RNA binding"
evidence=IEA;IDA] [GO:0006614 "SRP-dependent cotranslational
protein targeting to membrane" evidence=IEA] [GO:0048500 "signal
recognition particle" evidence=IEA] InterPro:IPR002778 Pfam:PF01922
SGD:S000004573 EMBL:BK006946 EMBL:Z49210 GO:GO:0008312 EMBL:X65783
eggNOG:COG1400 OrthoDB:EOG4B2X69 GO:GO:0005786 GO:GO:0006617
Gene3D:3.30.56.30 PANTHER:PTHR17453 SUPFAM:SSF69695 EMBL:AY693145
PIR:S21731 RefSeq:NP_013602.1 ProteinModelPortal:P29478 SMR:P29478
DIP:DIP-3850N IntAct:P29478 MINT:MINT-506803 STRING:P29478
PaxDb:P29478 PeptideAtlas:P29478 PRIDE:P29478 EnsemblFungi:YML105C
GeneID:854866 KEGG:sce:YML105C CYGD:YML105c HOGENOM:HOG000248333
KO:K03105 OMA:PQDFGNP NextBio:977792 Genevestigator:P29478
GermOnline:YML105C InterPro:IPR022938 Uniprot:P29478
Length = 273
Score = 113 (44.8 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 28/86 (32%), Positives = 44/86 (51%)
Query: 4 IDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHIE 63
I K +V+R+ +YP Y + ++ EGRR+PK AV+NP K + D + G+ E
Sbjct: 87 ISKKDLEEVKRFQVLYPCYFDINRSHKEGRRVPKELAVENPLAKTMADAVRELGILCIFE 146
Query: 64 N-KLYPREISKEHFVRGRARVQLKND 88
K +P++ GR RV K +
Sbjct: 147 GEKCHPQDFGNP----GRIRVLFKEN 168
>CGD|CAL0002482 [details] [associations]
symbol:SEC65 species:5476 "Candida albicans" [GO:0005786
"signal recognition particle, endoplasmic reticulum targeting"
evidence=IGI] [GO:0006617 "SRP-dependent cotranslational protein
targeting to membrane, signal sequence recognition" evidence=IGI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
InterPro:IPR002778 Pfam:PF01922 CGD:CAL0002482 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0008312 GO:GO:0005786 GO:GO:0006617
Gene3D:3.30.56.30 PANTHER:PTHR17453 SUPFAM:SSF69695 KO:K03105
RefSeq:XP_718224.1 RefSeq:XP_718320.1 ProteinModelPortal:Q5A9A9
STRING:Q5A9A9 GeneID:3640005 GeneID:3640123 KEGG:cal:CaO19.10089
KEGG:cal:CaO19.2557 Uniprot:Q5A9A9
Length = 275
Score = 113 (44.8 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 31/104 (29%), Positives = 51/104 (49%)
Query: 3 TIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI 62
T + KK D ++ IYP Y + ++ +GRR+ +AV+NP I D GL +
Sbjct: 83 TEEEKKQFD--QFQIIYPCYFDINRSHKQGRRVSIDRAVENPLATTISDTCRRLGLPVFL 140
Query: 63 E-NKLYPREISKEHFVRGRARVQLKN--DDGSPVNPDFPTREAV 103
E +K +P++ GR +V K D+G +NP T+ +
Sbjct: 141 ELDKTHPQDFGNP----GRVKVLFKAVFDNGKLINPKLQTKRVL 180
>UNIPROTKB|Q5A9A9 [details] [associations]
symbol:SEC65 "Putative uncharacterized protein SEC65"
species:237561 "Candida albicans SC5314" [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=IGI] [GO:0006617 "SRP-dependent cotranslational protein
targeting to membrane, signal sequence recognition" evidence=IGI]
InterPro:IPR002778 Pfam:PF01922 CGD:CAL0002482 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0008312 GO:GO:0005786 GO:GO:0006617
Gene3D:3.30.56.30 PANTHER:PTHR17453 SUPFAM:SSF69695 KO:K03105
RefSeq:XP_718224.1 RefSeq:XP_718320.1 ProteinModelPortal:Q5A9A9
STRING:Q5A9A9 GeneID:3640005 GeneID:3640123 KEGG:cal:CaO19.10089
KEGG:cal:CaO19.2557 Uniprot:Q5A9A9
Length = 275
Score = 113 (44.8 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 31/104 (29%), Positives = 51/104 (49%)
Query: 3 TIDTKKHTDVERWVCIYPAYINRKKTLAEGRRIPKAKAVDNPTYKDIDDVLSTTGLKYHI 62
T + KK D ++ IYP Y + ++ +GRR+ +AV+NP I D GL +
Sbjct: 83 TEEEKKQFD--QFQIIYPCYFDINRSHKQGRRVSIDRAVENPLATTISDTCRRLGLPVFL 140
Query: 63 E-NKLYPREISKEHFVRGRARVQLKN--DDGSPVNPDFPTREAV 103
E +K +P++ GR +V K D+G +NP T+ +
Sbjct: 141 ELDKTHPQDFGNP----GRVKVLFKAVFDNGKLINPKLQTKRVL 180
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 150 140 0.00091 102 3 11 22 0.46 31
30 0.46 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 572 (61 KB)
Total size of DFA: 132 KB (2083 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.42u 0.07s 15.49t Elapsed: 00:00:01
Total cpu time: 15.43u 0.07s 15.50t Elapsed: 00:00:01
Start: Thu Aug 15 12:45:32 2013 End: Thu Aug 15 12:45:33 2013