RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy6935
(1575 letters)
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like
domain, actin binding protein, contractIle protein;
20.00A {Gallus gallus} SCOP: i.15.1.1
Length = 863
Score = 301 bits (770), Expect = 4e-86
Identities = 140/624 (22%), Positives = 266/624 (42%), Gaps = 70/624 (11%)
Query: 976 VPEIEQRLKLLNQAWSELKQLAANRGQKLDESLTYQHFLAKVEEEEAWISEKQQLLSVED 1035
V +A + ++ + + + + WI L
Sbjct: 218 VSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRA 277
Query: 1036 YGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEAK------NHHADSITQRC 1089
+TM A+Q L+ + + + ++ K S +
Sbjct: 278 PENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMV 337
Query: 1090 QQLQLKLDNLMALATKRKTKLMD--------NSAYLQFMWKADVVESWIADKETHVKSEE 1141
+ L + L++ + +F KA + ESW KE ++ ++
Sbjct: 338 SDINNAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQKD 397
Query: 1142 Y-GRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTLKDQLVASNHDQTPAIVKRHGDVI 1200
Y LS ++ LL K E F++ L A + + ++ I + +L ++ +P++ R +
Sbjct: 398 YETATLSEIKALLKKHEAFESDLAAHQ-DRVEQIAAIAQELNELDYYDSPSVNARCQKIC 456
Query: 1201 ARWQKLLGDSNARKQRLLRMQEQFRQIEDLYLTFAKKASSFNKPQPLSRDMEMSLQDGRS 1260
+W L + R++ L R ++ I+ LYL +AK+A+ FN
Sbjct: 457 DQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFN------------------ 498
Query: 1261 YLEIPMPGNNVFSASSFNSWFENAEEDLTDPVRCNSIEEIRALREAHAQFQASLSSAQAD 1320
+W E A EDL D ++IEEI+ L AH QF+A+L A +
Sbjct: 499 ------------------NWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDADKE 540
Query: 1321 FEALAALDQQIKSF-------NVGPNPYTWFTMEALEDTWRNLQKIIKERDIELAKEATR 1373
+A+ + ++ G NPYT T + + W ++++++ RD L +E R
Sbjct: 541 RQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWEHVRQLVPRRDQALMEEHAR 600
Query: 1374 QDENDALRKEFAKHANAFHQWLTETR----TSMMEGTGSLEQQLEAIKRKAAEVRSRRSD 1429
Q +N+ LRK+F AN W+ +E G+LE QL +++ + + +
Sbjct: 601 QQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEMHGTLEDQLNHLRQYEKSIVNYKPK 660
Query: 1430 LKKIEDLGAILEEHLILDNRYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNQSGVS 1489
+ ++E ++E LI DN++T ++ + W+QL R + +E QI R+ G+S
Sbjct: 661 IDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGIS 720
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN 1549
++ + EF F HFD+ K+G ++ +F++CL ++GY++ + EF I+ +VDPN
Sbjct: 721 QEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNM-------GEAEFARIMSIVDPN 773
Query: 1550 RDGHVSLQEYMAFMISKETRQNSS 1573
R G V+ Q ++ FM + +++
Sbjct: 774 RMGVVTFQAFIDFMSRETADTDTA 797
Score = 140 bits (354), Expect = 7e-34
Identities = 83/531 (15%), Positives = 186/531 (35%), Gaps = 42/531 (7%)
Query: 529 NLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLPYFS 588
++D VG+ + + + + + K + L
Sbjct: 196 KMLDAEDIVGTARPDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDY 255
Query: 589 KKDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKA-----INAHEEKIGALQ 643
+K W+ +L ++ ++ ++ D+ + + +
Sbjct: 256 EKLASDLLEWIRRTIPWLENRAPENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFN 315
Query: 644 TLADQLIAADHYAAKP--------IDDKRKQVLDRWRLLKEALIEKRSRLGESQTL-QQF 694
TL +L ++ A P I++ + + +E L+ + RL L ++F
Sbjct: 316 TLQTKLRLSNRPAFMPSEGKMVSDINNAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKF 375
Query: 695 SRDADEMENWIAEKLQLATEESYK--DPANIQSKHQKHQAFEAELAANADRIQSVLAMGQ 752
+ A E+W K + ++ Y+ + I++ +KH+AFE++LAA+ DR++ + A+ Q
Sbjct: 376 RQKASIHESWTDGKEAMLQQKDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQ 435
Query: 753 NLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANK--------QRTYIAA 804
L + +V AR I DQW+ L T ++ L+ K Y
Sbjct: 436 ELNELD--YYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKR 493
Query: 805 VKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLID 864
+ W+ L + +Q L H+ +A + D + + G + +
Sbjct: 494 AAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSK 553
Query: 865 SGQFDASSIQEKR-------QSINERYERIKNLAAHRQARLNEA--------NTLHQFFR 909
Q ++ Q IN ++E ++ L R L E QF
Sbjct: 554 IVQTYHVNMAGTNPYTTITPQEINGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGA 613
Query: 910 DIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLM 969
WI+ K +G T +++ ++ E + +++P I ++ +++
Sbjct: 614 QANVIGPWIQTKMEEIGRISIEMHGT-LEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQ 672
Query: 970 DVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESLTYQHFLAKVEEE 1020
+ ++ + W +L A +++ + + +E+
Sbjct: 673 EALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQ 723
Score = 124 bits (311), Expect = 9e-29
Identities = 81/546 (14%), Positives = 190/546 (34%), Gaps = 36/546 (6%)
Query: 209 SQQNLADVKEVKILETANDIQERREQVLNRYADFKSEARSKREKLEDITVKEVKILETAN 268
+ A + K+L + ++ E +D R LE+
Sbjct: 229 QKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLEN---------RAPE 279
Query: 269 DIQERREQVLNRYADFKSEARSKREKLEDSRRFQYFKRDADELESWIYEKLQAASDESYK 328
+ + +Q L + D++ + + + + + S + +
Sbjct: 280 NTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSD 339
Query: 329 ETTNLQAKIQKHQAFEAEVAAHSNAIVVLDNTGNDFYRDCEQAENWMSAREAFLNAEEVD 388
Q + +E + + LD+ F + E+W +EA L ++ +
Sbjct: 340 INNAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQKDYE 399
Query: 389 SKT-DNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHYAAKPIDDKRKQVLDRW 447
+ T ++AL+KKHE F+ + AH++++ + +A +L D+Y + ++ + +++ D+W
Sbjct: 400 TATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQW 459
Query: 448 RLLKEALIEKRSRLGESQTLQQ--------FSRDADEMENWIAEKLQ-LATEESYKDPAN 498
L ++R L ++ L + +++ A NW+ ++ L
Sbjct: 460 DNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEE 519
Query: 499 IQSKHQKHQAFEAELAANADRIQSVLAMGQNLI-----DKRQCVGSEEAVQARLASIADQ 553
IQ H+ F+A L Q++L + + G+ I +
Sbjct: 520 IQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGK 579
Query: 554 WEFLTQKTTEKSLKLKEANKQRTYIAAVKDLPYFSKKDCEQAENWMSAREAFLNAEEVDS 613
WE + Q + L E + ++ ++ W+ + + ++
Sbjct: 580 WEHVRQLVPRRDQALMEEHARQQQNERLRK---QFGAQANVIGPWIQTKMEEIGRISIEM 636
Query: 614 KTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHYAAKPIDDKRKQVLDRWRL 673
+E + ++K+I ++ KI L+ Q+ A + K + + + W
Sbjct: 637 HGT-LEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQ 695
Query: 674 LKEALIEKRSRLGESQTLQQFSRDADEMENWIAEKLQLATEESYKDPANIQSKHQKHQAF 733
L + + + Q +RDA + + S+ ++ + F
Sbjct: 696 LLTTIARTINEVEN----QILTRDAKGISQEQMNEF----RASFNHFDRKKTGMMDCEDF 747
Query: 734 EAELAA 739
A L +
Sbjct: 748 RACLIS 753
Score = 122 bits (307), Expect = 3e-28
Identities = 88/593 (14%), Positives = 208/593 (35%), Gaps = 57/593 (9%)
Query: 362 NDFYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKA-----INAHEEKIG 416
D+ + W+ +L ++ ++ ++ D+ + + +
Sbjct: 253 EDYEKLASDLLEWIRRTIPWLENRAPENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEI 312
Query: 417 ALQTLADQLIAADHYAAKP--------IDDKRKQVLDRWRLLKEALIEKRSRLGESQTL- 467
TL +L ++ A P I++ + + +E L+ + RL L
Sbjct: 313 NFNTLQTKLRLSNRPAFMPSEGKMVSDINNAWGGLEQAEKGYEEWLLNEIRRLERLDHLA 372
Query: 468 QQFSRDADEMENWIAEKLQLATEESYK--DPANIQSKHQKHQAFEAELAANADRIQSVLA 525
++F + A E+W K + ++ Y+ + I++ +KH+AFE++LAA+ DR++ + A
Sbjct: 373 EKFRQKASIHESWTDGKEAMLQQKDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAA 432
Query: 526 MGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLP 585
+ Q L + +V AR I DQW+ L T ++ L+ K I L
Sbjct: 433 IAQELNELD--YYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETI---DQLY 487
Query: 586 YFSKKDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTL 645
K NWM L + + ++ L HE F + +++ A+ +
Sbjct: 488 LEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDADKERQAILGI 547
Query: 646 ADQLIAADHYAAKPIDDKRKQ-------VLDRWRLLKEALIEKRSRLGES--------QT 690
+++ + + +W +++ + + L E +
Sbjct: 548 HNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWEHVRQLVPRRDQALMEEHARQQQNERL 607
Query: 691 LQQFSRDADEMENWIAEKLQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAM 750
+QF A+ + WI K++ S + ++ + + +E + +I +
Sbjct: 608 RKQFGAQANVIGPWIQTKMEEIGRISIEMHGTLEDQLNHLRQYEKSIVNYKPKIDQLEGD 667
Query: 751 GQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLDF 810
Q + + + + + I WE L +++ R ++
Sbjct: 668 HQQIQE--ALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQE--- 722
Query: 811 WLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDSGQFDA 870
+ E + D K +D + ++ ++
Sbjct: 723 QMNEFRASFNHFDRKKTGM----------------MDCEDFRACLISMGYNMGEAEFARI 766
Query: 871 SSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQFFRDIADEESWIKEKKL 923
SI + + ++ + + A + A+ + F+ +A ++++I +L
Sbjct: 767 MSIVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDKNYITVDEL 819
Score = 61.8 bits (149), Expect = 2e-09
Identities = 56/422 (13%), Positives = 131/422 (31%), Gaps = 22/422 (5%)
Query: 1 MEQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTS 60
+E + ++ + + E N +E E L++E +
Sbjct: 310 LEINFNTLQTKLRLSNRPAFMPSEGKMVSDINNAWGGLEQAEKGYEEWLLNE-----IRR 364
Query: 61 VQNLQKKHALLEADVASHLDRIESVKAATEQFLEHYGKDEDSSEALLKKHEALVSDLEAF 120
++ L + H + +A +Q ++ +ALLKKHEA SDL A
Sbjct: 365 LERLDHLAEKFRQKASIHESWTDGKEAMLQQ-KDYETATLSEIKALLKKHEAFESDLAAH 423
Query: 121 GNTILGLREQAQSCRQQETPVIDVTGK--ECVIALYDYTEKSPREVSMKKSDVLTLLNSN 178
+ + + AQ + + + + +D ++ LL
Sbjct: 424 QDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLL-ET 482
Query: 179 NKDWWKVEVNDRQGFVPAAYVKKMEAGLTASQQNLADVKEV-----KILETANDIQERRE 233
+ F + T + +++ + + T D + R+
Sbjct: 483 IDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDADKERQ 542
Query: 234 QVLNRYADFKSEARSKREKLEDITVKEVKILETANDIQERREQVLNRYADFKSEARSKRE 293
+L + + ++ + + N E Q++ R E ++++
Sbjct: 543 AILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWEHVRQLVPRRDQALMEEHARQQ 602
Query: 294 KLEDSRRFQYFKRDADELESWIYEKLQAASDESYKETTNLQAKIQKHQAFEAEVAAHSNA 353
+ E R+ F A+ + WI K++ S + L+ ++ + +E + +
Sbjct: 603 QNERLRKQ--FGAQANVIGPWIQTKMEEIGRISIEMHGTLEDQLNHLRQYEKSIVNYKPK 660
Query: 354 IVVLDNTGNDFYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDF-DKAINAHE 412
I L+ Q + E + + + I + + + I +
Sbjct: 661 IDQLEGDHQQI-----QEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRD 715
Query: 413 EK 414
K
Sbjct: 716 AK 717
Score = 49.9 bits (118), Expect = 7e-06
Identities = 22/284 (7%), Positives = 75/284 (26%), Gaps = 13/284 (4%)
Query: 1 MEQIVHLWESLATATEKKGNKLQEASQQQ--------GFNRTIEDIELWLSEIEGQLMSE 52
++I W++L T+K+ L+ + + + W+ L
Sbjct: 452 CQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDT 511
Query: 53 DYGKDLTSVQNLQKKHALLEADVASHLDRIESVKAATEQFLEHYGKDEDSSEALLKKHEA 112
+ +Q L H +A + +++ + + +
Sbjct: 512 FIVHTIEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTI 571
Query: 113 LVSDLEAFGNTILGLREQAQSCRQQETPVIDVTGKECVIALYDYTEKSPREVSMKKSDVL 172
++ + Q R Q ++ + ++ ++ +
Sbjct: 572 TPQEINGKWEHV----RQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKME 627
Query: 173 TLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEAGLTASQQNLADVKEVKILETANDIQERR 232
+ + + +E + + + + + ++E I +
Sbjct: 628 EIGRISIEMHGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFD-NKHTNYTM 686
Query: 233 EQVLNRYADFKSEARSKREKLEDITVKEVKILETANDIQERREQ 276
E + + + ++E+ + + + E R
Sbjct: 687 EHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQMNEFRAS 730
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of
spectrin, alpha-helical linker region, 3-helix
coiled-coil, structural protein; 2.50A {Gallus gallus}
SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Length = 322
Score = 250 bits (641), Expect = 8e-75
Identities = 204/321 (63%), Positives = 260/321 (80%)
Query: 795 ANKQRTYIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKD 854
ANKQ+ + +KD DFWL EVE+LL SED GKDLASV NL+KKHQL+EADI AH+DR+KD
Sbjct: 2 ANKQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKD 61
Query: 855 MNGQADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQFFRDIADE 914
+N QADSL+ S FD S +++KR++IN R++RIK++AA R+A+LNE++ LHQFFRD+ DE
Sbjct: 62 LNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDE 121
Query: 915 ESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMDVSNL 974
ESWIKEKKLLV S+DYGRDLTGVQNL+KKHKRLEAELA+H+PAIQ V +TG+KL D + +
Sbjct: 122 ESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTI 181
Query: 975 GVPEIEQRLKLLNQAWSELKQLAANRGQKLDESLTYQHFLAKVEEEEAWISEKQQLLSVE 1034
G EI+QRL W ELKQLAA RGQ+L+ESL YQ F+A VEEEEAWI+EK L++ E
Sbjct: 182 GKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASE 241
Query: 1035 DYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEAKNHHADSITQRCQQLQL 1094
DYGDT+AA+QGLLKKH+AFETDF+VH+DR D+C+ G LI+ NHH ++IT + + L+
Sbjct: 242 DYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKG 301
Query: 1095 KLDNLMALATKRKTKLMDNSA 1115
K+ +L A +RK KL +NSA
Sbjct: 302 KVSDLEKAAAQRKAKLDENSA 322
Score = 198 bits (506), Expect = 1e-56
Identities = 96/317 (30%), Positives = 159/317 (50%), Gaps = 1/317 (0%)
Query: 901 ANTLHQFFRDIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQN 960
AN F I D + W+ E + L+ S+DYG+DL V NL KKH+ LEA++++H+ +++
Sbjct: 2 ANKQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKD 61
Query: 961 VQETGEKLMDVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESLTYQHFLAKVEEE 1020
+ + LM S +++ + + +N + +K +AA R KL+ES F +++E
Sbjct: 62 LNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDE 121
Query: 1021 EAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEAKNH 1080
E+WI EK+ L+S EDYG + VQ L KKH E + + H + G KL +
Sbjct: 122 ESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTI 181
Query: 1081 HADSITQRCQQLQLKLDNLMALATKRKTKLMDNSAYLQFMWKADVVESWIADKETHVKSE 1140
+ I QR Q L LA R +L ++ Y QF+ + E+WI +K T V SE
Sbjct: 182 GKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASE 241
Query: 1141 EYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTLKDQLVASNHDQTPAIVKRHGDVI 1200
+YG L+ +Q LL K E F+ + + + ++ + L+ N+ I + +
Sbjct: 242 DYGDTLAAIQGLLKKHEAFETDFTVHK-DRVNDVCANGEDLIKKNNHHVENITAKMKGLK 300
Query: 1201 ARWQKLLGDSNARKQRL 1217
+ L + RK +L
Sbjct: 301 GKVSDLEKAAAQRKAKL 317
Score = 194 bits (495), Expect = 3e-55
Identities = 98/319 (30%), Positives = 171/319 (53%), Gaps = 3/319 (0%)
Query: 691 LQQFSRDADEMENWIAEKL-QLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLA 749
Q F+ + + W++E LA+E+ KD A++ + +KHQ EA+++A+ DR++ + +
Sbjct: 5 QQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNS 64
Query: 750 MGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLD 809
+L+ V+ + +I +++ + + KL E+++ + + D +
Sbjct: 65 QADSLMTSSAF--DTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEE 122
Query: 810 FWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDSGQFD 869
W+ E + L++SED G+DL VQNL KKH+ +EA++ AH+ I+ + L D
Sbjct: 123 SWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIG 182
Query: 870 ASSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQFFRDIADEESWIKEKKLLVGSDD 929
IQ++ + ++ +K LAA R RL E+ QF ++ +EE+WI EK LV S+D
Sbjct: 183 KEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASED 242
Query: 930 YGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMDVSNLGVPEIEQRLKLLNQA 989
YG L +Q L KKH+ E + H+ + +V GE L+ +N V I ++K L
Sbjct: 243 YGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKGK 302
Query: 990 WSELKQLAANRGQKLDESL 1008
S+L++ AA R KLDE+
Sbjct: 303 VSDLEKAAAQRKAKLDENS 321
Score = 188 bits (479), Expect = 4e-53
Identities = 102/313 (32%), Positives = 171/313 (54%), Gaps = 3/313 (0%)
Query: 590 KDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQL 649
+ + W+S EA L +E+ +V L+KKH+ + I+AHE+++ L + AD L
Sbjct: 10 TGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSL 69
Query: 650 IAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIAEKL 709
+ + + + DKR+ + R++ +K +R++L ES L QF RD D+ E+WI EK
Sbjct: 70 MTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKK 129
Query: 710 QLATEESY-KDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEEAVQ 768
L + E Y +D +Q+ +KH+ EAELAA+ IQ VL G+ L D +E +Q
Sbjct: 130 LLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTI--GKEEIQ 187
Query: 769 ARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLDFWLGEVESLLTSEDSGKDL 828
RLA D W+ L Q + +L+E+ + + ++A V++ + W+ E +L+ SED G L
Sbjct: 188 QRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTL 247
Query: 829 ASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDSGQFDASSIQEKRQSINERYERIK 888
A++Q L+KKH+ E D H DR+ D+ + LI +I K + + + ++
Sbjct: 248 AAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKGKVSDLE 307
Query: 889 NLAAHRQARLNEA 901
AA R+A+L+E
Sbjct: 308 KAAAQRKAKLDEN 320
Score = 175 bits (444), Expect = 2e-48
Identities = 92/327 (28%), Positives = 172/327 (52%), Gaps = 14/327 (4%)
Query: 363 DFYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLA 422
+F + + W+S EA L +E+ +V L+KKH+ + I+AHE+++ L + A
Sbjct: 7 NFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQA 66
Query: 423 DQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIA 482
D L+ + + + DKR+ + R++ +K +R++L ES L QF RD D+ E+WI
Sbjct: 67 DSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIK 126
Query: 483 EKLQLATEESY-KDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEE 541
EK L + E Y +D +Q+ +KH+ EAELAA+ IQ VL G+ L D +E
Sbjct: 127 EKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTI--GKE 184
Query: 542 AVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLPYFSKKDCEQAENWMSA 601
+Q RLA D W+ L Q + +L+E+ + + ++A + E+ E W++
Sbjct: 185 EIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVA-----------NVEEEEAWINE 233
Query: 602 REAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHYAAKPID 661
+ + +E+ ++ L+KKHE F+ H++++ + + LI +++ + I
Sbjct: 234 KMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENIT 293
Query: 662 DKRKQVLDRWRLLKEALIEKRSRLGES 688
K K + + L++A +++++L E+
Sbjct: 294 AKMKGLKGKVSDLEKAAAQRKAKLDEN 320
Score = 131 bits (330), Expect = 3e-33
Identities = 73/319 (22%), Positives = 135/319 (42%), Gaps = 49/319 (15%)
Query: 300 RFQYFKRDADELESWIYEKLQAASDESYKET-TNLQAKIQKHQAFEAEVAAHSNAIVVLD 358
+ Q F + + W+ E + E Y + ++ ++KHQ EA+++AH + + L+
Sbjct: 4 KQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLN 63
Query: 359 NTGND---------------------------------------------FYRDCEQAEN 373
+ + F+RD + E+
Sbjct: 64 SQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEES 123
Query: 374 WMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHYAA 433
W+ ++ +++E+ V+ L KKH+ + + AHE I + +L +
Sbjct: 124 WIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGK 183
Query: 434 KPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIAEKLQ-LATEES 492
+ I + Q +D W+ LK+ + RL ES QQF + +E E WI EK+ +A+E+
Sbjct: 184 EEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDY 243
Query: 493 YKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEEAVQARLASIAD 552
A IQ +KH+AFE + + DR+ V A G++LI K E + A++ +
Sbjct: 244 GDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNH--HVENITAKMKGLKG 301
Query: 553 QWEFLTQKTTEKSLKLKEA 571
+ L + ++ KL E
Sbjct: 302 KVSDLEKAAAQRKAKLDEN 320
Score = 101 bits (254), Expect = 2e-23
Identities = 62/282 (21%), Positives = 128/282 (45%), Gaps = 50/282 (17%)
Query: 233 EQVLNRYADFKSEARSKREKLEDITVKEVKILET----ANDIQERREQVLNRYADFKSEA 288
+L ++ +++ + ++L+D+ + ++ + + ++++RE + R+ KS A
Sbjct: 39 NNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMA 98
Query: 289 RSKREKLEDSRRFQYFKRDADELESWIYEKLQAASDESY-KETTNLQAKIQKHQAFEAEV 347
++R KL +S R F RD D+ ESWI EK S E Y ++ T +Q +KH+ EAE+
Sbjct: 99 AARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAEL 158
Query: 348 AAHSNAIVVLDNTGND-------------------------------------------- 363
AAH AI + +TG
Sbjct: 159 AAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQ 218
Query: 364 -FYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLA 422
F + E+ E W++ + + +E+ ++ L+KKHE F+ H++++ +
Sbjct: 219 QFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANG 278
Query: 423 DQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGES 464
+ LI +++ + I K K + + L++A +++++L E+
Sbjct: 279 EDLIKKNNHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDEN 320
Score = 97.3 bits (242), Expect = 9e-22
Identities = 51/366 (13%), Positives = 127/366 (34%), Gaps = 58/366 (15%)
Query: 1118 QFMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTL 1177
F + W+++ E + SE+YG+DL++V LL K + +A + A E + ++++ +
Sbjct: 7 NFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHE-DRLKDLNSQ 65
Query: 1178 KDQLVASNHDQTPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQIEDLYLTFAKK 1237
D L+ S+ T + + + R+Q++ + AR+ +L + D+
Sbjct: 66 ADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDM------- 118
Query: 1238 ASSFNKPQPLSRDMEMSLQDGRSYLEIPMPGNNVFSASSFNSWFENAEEDLTDPVRCNSI 1297
SW + + ++ +
Sbjct: 119 -------------------------------------DDEESWIKEKKLLVSSEDYGRDL 141
Query: 1298 EEIRALREAHAQFQASLSSAQADFEALAALDQQIKSFNVGPNPYTWFTMEALEDTWRNLQ 1357
++ LR+ H + +A L++ + + + +++ N + D W+ L+
Sbjct: 142 TGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELK 201
Query: 1358 KIIKERDIELAKEATRQDENDALRKEFAKHANAFHQWLTETRTSMMEG-----TGSLEQQ 1412
++ R L + Q +F + W+ E T + +++
Sbjct: 202 QLAAARGQRLEESLEYQ--------QFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGL 253
Query: 1413 LEAIKRKAAEVRSRRSDLKKIEDLGAILEEHLILDNRYTEHSTVGLAQQWDQLDQLGMRM 1472
L+ + + + + + G L + GL + L++ +
Sbjct: 254 LKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKGKVSDLEKAAAQR 313
Query: 1473 QHNLEQ 1478
+ L++
Sbjct: 314 KAKLDE 319
Score = 76.5 bits (188), Expect = 9e-15
Identities = 83/383 (21%), Positives = 155/383 (40%), Gaps = 75/383 (19%)
Query: 25 ASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTSVQNLQKKHALLEADVASHLDRIES 84
A++QQ FN I+D + WLSE+E L SEDYGKDL SV NL KKH LLEAD+++H DR++
Sbjct: 2 ANKQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKD 61
Query: 85 VKAATEQFLEHYGKDEDS----SEALLKKHEALVSDLEAFGNTILGLREQAQSCRQQETP 140
+ + + + D E + + + + S A + Q R +
Sbjct: 62 LNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDE 121
Query: 141 VIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVK 200
+ K+ +++ DY + V L + + + E+ + +
Sbjct: 122 ESWIKEKKLLVSSEDYGRDL--------TGVQNLRKKHKR--LEAELAAHEPAI------ 165
Query: 201 KMEAGLTASQQNLADVKEVKILETANDIQERREQVLNRYADFKSEARSKREKLEDITVKE 260
G+ + + L+D +IQ+R Q ++ + + K A ++ ++LE
Sbjct: 166 ---QGVLDTGKKLSDDNT----IGKEEIQQRLAQFVDHWKELKQLAAARGQRLE------ 212
Query: 261 VKILETANDIQERREQVLNRYADFKSEARSKREKLEDSRRFQYFKRDADELESWIYEKLQ 320
+S +Q F + +E E+WI EK+
Sbjct: 213 ------------------------------------ESLEYQQFVANVEEEEAWINEKMT 236
Query: 321 AASDESYKET-TNLQAKIQKHQAFEAEVAAHSNAIVVLDNTGNDFYRDCEQAENWMSARE 379
+ E Y +T +Q ++KH+AFE + H + + + G D + ++A+
Sbjct: 237 LVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAK- 295
Query: 380 AFLNAEEVDSKTDNVEALIKKHE 402
+ + K ++E + +
Sbjct: 296 ----MKGLKGKVSDLEKAAAQRK 314
Score = 63.0 bits (153), Expect = 2e-10
Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Query: 1 MEQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTS 60
+ Q V W+ L +G +L+E+ + Q F +E+ E W++E + SEDYG L +
Sbjct: 190 LAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAA 249
Query: 61 VQNLQKKHALLEADVASHLDRIESVKAATEQFLEHYGKDEDSSEALLKKHEALVSDLEAF 120
+Q L KKH E D H DR+ V A E ++ K+ E + K + L +
Sbjct: 250 IQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIK---KNNHHVENITAKMKGLKGKVSDL 306
Query: 121 GNTI 124
Sbjct: 307 EKAA 310
Score = 61.8 bits (150), Expect = 5e-10
Identities = 37/136 (27%), Positives = 67/136 (49%)
Query: 1 MEQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTS 60
E I ++ + + + KL E+ + F R ++D E W+ E + + SEDYG+DLT
Sbjct: 84 RETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTG 143
Query: 61 VQNLQKKHALLEADVASHLDRIESVKAATEQFLEHYGKDEDSSEALLKKHEALVSDLEAF 120
VQNL+KKH LEA++A+H I+ V ++ + ++ + L + +L+
Sbjct: 144 VQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQL 203
Query: 121 GNTILGLREQAQSCRQ 136
E++ +Q
Sbjct: 204 AAARGQRLEESLEYQQ 219
Score = 56.8 bits (137), Expect = 2e-08
Identities = 28/216 (12%), Positives = 70/216 (32%), Gaps = 13/216 (6%)
Query: 1273 SASSFNSWFENAEEDLTDPVRCNSIEEIRALREAHAQFQASLSSAQADFEALAALDQQIK 1332
F+ W E L + + L + H +A +S+ + + L + +
Sbjct: 11 GIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLM 70
Query: 1333 SFNVGPNPYTWFTMEALEDTWRNLQKIIKERDIELAKEATRQDENDALRKEFAKHANAFH 1392
+ + E + ++ ++ + R +L +F + +
Sbjct: 71 TSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKL--------NESHRLHQFFRDMDDEE 122
Query: 1393 QWLTETRTSMMEG-----TGSLEQQLEAIKRKAAEVRSRRSDLKKIEDLGAILEEHLILD 1447
W+ E + + ++ + KR AE+ + ++ + D G L + +
Sbjct: 123 SWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIG 182
Query: 1448 NRYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQAR 1483
+ W +L QL LE+ ++ +
Sbjct: 183 KEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQ 218
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin,
spectrin repeat, three helix bundle, ANKY binding,
disease mutation, structural protein, ZU5 sandwich; 2.75A
{Homo sapiens} PDB: 3kbu_A
Length = 326
Score = 194 bits (494), Expect = 5e-55
Identities = 80/325 (24%), Positives = 143/325 (44%), Gaps = 3/325 (0%)
Query: 794 EANKQRTYIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIK 853
AN+ + Y + + W+GE E + S++ KD ++K+H + ++ + IK
Sbjct: 2 NANEAQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIK 61
Query: 854 DMNGQADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQFFRDIAD 913
+ +A L+ +G + I + +++ Y +K++A R+ +L L Q R+ D
Sbjct: 62 QLASRAQGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRETDD 121
Query: 914 EESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAEL-ASHQPAIQNVQETGEKLMDVS 972
E WI EK+L+ S + G+D V L+ K + E A Q + NV E+L+D
Sbjct: 122 LEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAG 181
Query: 973 NLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESLTYQHFLAKVEEEEAWISEKQQLLS 1032
+ I + LN+ W++L +L R Q L S + E I EK + L
Sbjct: 182 HSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHRELP 241
Query: 1033 VEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEAKNH-HADSITQRCQQ 1091
ED G + + + H AFE D + + +L A A++I + Q+
Sbjct: 242 -EDVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQE 300
Query: 1092 LQLKLDNLMALATKRKTKLMDNSAY 1116
+ L+ R+T+L+D +
Sbjct: 301 VSAAWQALLDACAGRRTQLVDTADK 325
Score = 194 bits (493), Expect = 7e-55
Identities = 71/328 (21%), Positives = 147/328 (44%), Gaps = 4/328 (1%)
Query: 899 NEANTLHQFFRDIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAI 958
+ AN Q++ D + E+WI E++L V SD+ +D G + K+H R + + + I
Sbjct: 1 SNANEAQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNI 60
Query: 959 QNVQETGEKLMDVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESLTYQHFLAKVE 1018
+ + + L+ + +I + +++ ++ LK +A R +KL+ + +
Sbjct: 61 KQLASRAQGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRETD 120
Query: 1019 EEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETD-FSVHRDRCADICSAGNKLIEA 1077
+ E WISEK+ + S + G V L K F + ++ ++R ++ + +LI+A
Sbjct: 121 DLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDA 180
Query: 1078 KNHHADSITQRCQQLQLKLDNLMALATKRKTKLMDNSAYLQFMWKADVVESWIADKETHV 1137
+ A +I + L +L+ L R L + ++ + + I +K +
Sbjct: 181 GHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHREL 240
Query: 1138 KSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTLKDQLVASNH-DQTPAIVKRH 1196
E+ G D ST ++ F+ +H + +Q + +L + ++ AI +
Sbjct: 241 -PEDVGLDASTAESFHRVHTAFERDVHLLGVQ-VQQFQDVATRLQTAYAGEKAEAIQNKE 298
Query: 1197 GDVIARWQKLLGDSNARKQRLLRMQEQF 1224
+V A WQ LL R+ +L+ ++F
Sbjct: 299 QEVSAAWQALLDACAGRRTQLVDTADKF 326
Score = 188 bits (479), Expect = 5e-53
Identities = 72/325 (22%), Positives = 135/325 (41%), Gaps = 6/325 (1%)
Query: 687 ESQTLQQFSRDADEMENWIAEK-LQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQ 745
+ QQ+ DADE E WI E+ L + ++E KD ++H + + I+
Sbjct: 2 NANEAQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIK 61
Query: 746 SVLAMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAV 805
+ + Q L+ E + + + L E+ KL+
Sbjct: 62 QLASRAQGLLSAGHP--EGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRET 119
Query: 806 KDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQA-HDDRIKDMNGQADSLID 864
DL+ W+ E E + +S + G+D V L K + + A +R+ ++N + LID
Sbjct: 120 DDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLID 179
Query: 865 SGQFDASSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQFFRDIADEESWIKEKKLL 924
+G +A++I E + +NE + + L R L + LH++F A+ I EK
Sbjct: 180 AGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHRE 239
Query: 925 VGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMDVSNLGVPE-IEQRL 983
+ +D G D + ++ + H E ++ +Q Q+ +L E I+ +
Sbjct: 240 L-PEDVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKE 298
Query: 984 KLLNQAWSELKQLAANRGQKLDESL 1008
+ ++ AW L A R +L ++
Sbjct: 299 QEVSAAWQALLDACAGRRTQLVDTA 323
Score = 155 bits (394), Expect = 1e-41
Identities = 66/316 (20%), Positives = 136/316 (43%), Gaps = 6/316 (1%)
Query: 590 KDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQL 649
D ++AE W+ +E ++ ++E+ + ++K+H +A+ + I L + A L
Sbjct: 11 LDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQLASRAQGL 70
Query: 650 IAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIAEKL 709
++A H + I + QV + LK+ E++ +L L Q R+ D++E WI+EK
Sbjct: 71 LSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRETDDLEQWISEKE 130
Query: 710 QLATEESY-KDPANIQSKHQKHQAFEAEL-AANADRIQSVLAMGQNLIDKRQCVGSEEAV 767
+A+ +D ++ K + F E A +R+ +V A + LID +
Sbjct: 131 LVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHS--EAATI 188
Query: 768 QARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLDFWLGEVESLLTSEDSGKD 827
+ + W L + + L + Y ++ + E L ED G D
Sbjct: 189 AEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHREL-PEDVGLD 247
Query: 828 LASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDSGQFD-ASSIQEKRQSINERYER 886
++ ++ + H E D+ +++ A L + + A +IQ K Q ++ ++
Sbjct: 248 ASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQA 307
Query: 887 IKNLAAHRQARLNEAN 902
+ + A R+ +L +
Sbjct: 308 LLDACAGRRTQLVDTA 323
Score = 149 bits (377), Expect = 2e-39
Identities = 67/334 (20%), Positives = 138/334 (41%), Gaps = 19/334 (5%)
Query: 364 FYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLAD 423
+Y D ++AE W+ +E ++ ++E+ + ++K+H +A+ + I L + A
Sbjct: 9 YYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQLASRAQ 68
Query: 424 QLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIAE 483
L++A H + I + QV + LK+ E++ +L L Q R+ D++E WI+E
Sbjct: 69 GLLSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRETDDLEQWISE 128
Query: 484 KLQLATEESY-KDPANIQSKHQKHQAFEAEL-AANADRIQSVLAMGQNLIDKRQCVGSEE 541
K +A+ +D ++ K + F E A +R+ +V A + LID
Sbjct: 129 KELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHS--EAA 186
Query: 542 AVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLPYFSKKDCEQAENWMSA 601
+ + + W L + + L + Y + +
Sbjct: 187 TIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYF-----------YTGAEILGLIDE 235
Query: 602 REAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHY-AAKPI 660
+ L + E+ + H F++ ++ ++ Q +A +L A A+ I
Sbjct: 236 KHRELPEDVGLD-ASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEAI 294
Query: 661 DDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQF 694
+K ++V W+ L +A +R++L T +F
Sbjct: 295 QNKEQEVSAAWQALLDACAGRRTQL--VDTADKF 326
Score = 147 bits (373), Expect = 5e-39
Identities = 63/325 (19%), Positives = 119/325 (36%), Gaps = 48/325 (14%)
Query: 297 DSRRFQYFKRDADELESWIYEK-LQAASDESYKETTNLQAKIQKHQAFEAEVAAHSNAIV 355
++ Q + DADE E+WI E+ L SDE K+ +++H + V + I
Sbjct: 2 NANEAQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIK 61
Query: 356 VLDNTGND---------------------------------------------FYRDCEQ 370
L + R+ +
Sbjct: 62 QLASRAQGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRETDD 121
Query: 371 AENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINA-HEEKIGALQTLADQLIAAD 429
E W+S +E ++ E+ D+V L K DF + A +E++ + ++LI A
Sbjct: 122 LEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAG 181
Query: 430 HYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIAEKLQLAT 489
H A I + + + + W L E + + L S L ++ E+ I EK +
Sbjct: 182 HSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHRELP 241
Query: 490 EESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEEAVQARLAS 549
E+ D + +S H+ H AFE ++ ++Q + L +E +Q +
Sbjct: 242 EDVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEA-IQNKEQE 300
Query: 550 IADQWEFLTQKTTEKSLKLKEANKQ 574
++ W+ L + +L + +
Sbjct: 301 VSAAWQALLDACAGRRTQLVDTADK 325
Score = 132 bits (332), Expect = 2e-33
Identities = 58/363 (15%), Positives = 112/363 (30%), Gaps = 46/363 (12%)
Query: 1006 ESLTYQHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCA 1065
+ Q + +E EAWI E++ + ++ +LK+H + +
Sbjct: 2 NANEAQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIK 61
Query: 1066 DICSAGNKLIEAKNHHADSITQRCQQLQLKLDNLMALATKRKTKLMDNSAYLQFMWKADV 1125
+ S L+ A + + I + Q+ L +A +RK KL + Q + D
Sbjct: 62 QLASRAQGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRETDD 121
Query: 1126 VESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTLKDQLVASN 1185
+E WI++KE S E G+D V L K F A E + N+ ++L+ +
Sbjct: 122 LEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAG 181
Query: 1186 HDQTPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQIEDLYLTFAKKASSFNKPQ 1245
H + I + + W LL + R Q L + R
Sbjct: 182 HSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYT---------------- 225
Query: 1246 PLSRDMEMSLQDGRSYLEIPMPGNNVFSASSFNSWFENAEEDLTDPVRCNSIEEIRALRE 1305
+ + +L + V +
Sbjct: 226 ----------------------------GAEILGLIDEKHRELPEDV-GLDASTAESFHR 256
Query: 1306 AHAQFQASLSSAQADFEALAALDQQIKSFNVGPN-PYTWFTMEALEDTWRNLQKIIKERD 1364
H F+ + + + ++++ G + + W+ L R
Sbjct: 257 VHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDACAGRR 316
Query: 1365 IEL 1367
+L
Sbjct: 317 TQL 319
Score = 87.3 bits (216), Expect = 2e-18
Identities = 49/370 (13%), Positives = 107/370 (28%), Gaps = 59/370 (15%)
Query: 1118 QFMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTL 1177
Q+ AD E+WI ++E +V S+E +D +L + + + I+ + +
Sbjct: 8 QYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRN-IKQLASR 66
Query: 1178 KDQLVASNHDQTPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQIEDLYLTFAKK 1237
L+++ H + I++ G V + L + RK++L M F+ +
Sbjct: 67 AQGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRE-------- 118
Query: 1238 ASSFNKPQPLSRDMEMSLQDGRSYLEIPMPGNNVFSASSFNSWFENAEEDLTDPVRCNSI 1297
W E + P
Sbjct: 119 ------------------------------------TDDLEQWISEKELVASSPEMGQDF 142
Query: 1298 EEIRALREAHAQFQASLSSAQAD-FEALAALDQQIKSFNVGPNPYTWFTMEALEDTWRNL 1356
+ + LR+ F + + + + A +++ + L + W +L
Sbjct: 143 DHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAEWKDGLNEMWADL 202
Query: 1357 QKIIKERDIELAKEATRQDENDALRKEFAKHANAFHQWLTETRTSMMEGTGSLEQQLEAI 1416
++I R LA + + E + E G E+
Sbjct: 203 LELIDTRMQLLAASYDLH--------RYFYTGAEILGLIDEKHRELPEDVGLDASTAESF 254
Query: 1417 KRK----AAEVRSRRSDLKKIEDLGAILEEHLILDNRYTEHSTVG-LAQQWDQLDQLGMR 1471
R +V +++ +D+ L+ + + ++ W L
Sbjct: 255 HRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDACAG 314
Query: 1472 MQHNLEQQIQ 1481
+ L
Sbjct: 315 RRTQLVDTAD 324
Score = 71.5 bits (175), Expect = 3e-13
Identities = 41/354 (11%), Positives = 102/354 (28%), Gaps = 70/354 (19%)
Query: 24 EASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTSVQNLQKKHALLEADVASHLDRIE 83
A++ Q + ++ E W+ E E ++S++ KD +
Sbjct: 2 NANEAQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVM------------------- 42
Query: 84 SVKAATEQFLEHYGKDEDSSEALLKKHEALVSDLEAFGNTILGLREQAQSCRQQETPVID 143
LK+H +E +G I L +AQ P +
Sbjct: 43 -----------------------LKRHLRQQRAVEDYGRNIKQLASRAQGLLSAGHPEGE 79
Query: 144 VTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKME 203
++ + V + + + ++ +
Sbjct: 80 -------------------QIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRETD 120
Query: 204 AGLTASQQNLADVKEVKILETANDIQERREQVLNRYADFKSEARSKREKLEDITVKEVKI 263
+ ++ + + + + +++ DF E + ++ D ++
Sbjct: 121 DLEQWISEKELVASSPEMGQDFDHV----TLLRDKFRDFARETGAIGQERVDNVNAFIER 176
Query: 264 LETAN-----DIQERREQVLNRYADFKSEARSKREKLEDSRRFQYFKRDADELESWIYEK 318
L A I E ++ + +AD ++ + L S + E+ I EK
Sbjct: 177 LIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEK 236
Query: 319 LQAASDESYKETTNLQAKIQKHQAFEAEVAAHSNAIVVLDNTGNDFYRDCEQAE 372
+ ++ + + ++ + H AFE +V + + +
Sbjct: 237 HRELPEDVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEK 290
Score = 58.4 bits (141), Expect = 7e-09
Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 1/119 (0%)
Query: 1 MEQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTS 60
Q+ + L E++ KL+ R +D+E W+SE E S + G+D
Sbjct: 85 QGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRETDDLEQWISEKELVASSPEMGQDFDH 144
Query: 61 VQNLQKKHALLEADV-ASHLDRIESVKAATEQFLEHYGKDEDSSEALLKKHEALVSDLE 118
V L+ K + A +R+++V A E+ ++ + + + +DL
Sbjct: 145 VTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAEWKDGLNEMWADLL 203
Score = 58.1 bits (140), Expect = 8e-09
Identities = 22/137 (16%), Positives = 53/137 (38%), Gaps = 3/137 (2%)
Query: 1 MEQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTS 60
+ + +W L + + L + + T +I + E + + ED G D ++
Sbjct: 192 KDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKH-RELPEDVGLDAST 250
Query: 61 VQNLQKKHALLEADVASHLDRIESVKAATEQFLEHYGKDEDSSEALLKKHEALVSDLEAF 120
++ + H E DV +++ + + Y ++ +EA+ K + + + +A
Sbjct: 251 AESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEK--AEAIQNKEQEVSAAWQAL 308
Query: 121 GNTILGLREQAQSCRQQ 137
+ G R Q +
Sbjct: 309 LDACAGRRTQLVDTADK 325
Score = 29.6 bits (66), Expect = 8.5
Identities = 12/113 (10%), Positives = 33/113 (29%), Gaps = 6/113 (5%)
Query: 1377 NDALR-KEFAKHANAFHQWLTETRTSMMEG-----TGSLEQQLEAIKRKAAEVRSRRSDL 1430
++A +++ A+ W+ E ++ L+ R+ V ++
Sbjct: 1 SNANEAQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNI 60
Query: 1431 KKIEDLGAILEEHLILDNRYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQAR 1483
K++ L + + + + L + + LE
Sbjct: 61 KQLASRAQGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLF 113
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin
capping, actin-binding, alternative splicing,
calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Length = 323
Score = 189 bits (481), Expect = 2e-53
Identities = 68/321 (21%), Positives = 140/321 (43%), Gaps = 3/321 (0%)
Query: 792 LKEANKQRTYIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADI-QAHDD 850
++ V DL+ W+ E E + S + G+D V L ++ + D +
Sbjct: 2 SHMRHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQE 61
Query: 851 RIKDMNGQADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQFFRD 910
R+ +N AD LI+SG DA++I E + +NE + + L R L + LH+F+ D
Sbjct: 62 RVDTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHD 121
Query: 911 IADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMD 970
+ I++K + ++ GRD V+ L++ H E ++ + ++ +QE +L
Sbjct: 122 AKEIFGRIQDKHKKL-PEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQA 180
Query: 971 VS-NLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESLTYQHFLAKVEEEEAWISEKQQ 1029
+I++R + +AW L +R +L ++ F + V + W+ + +
Sbjct: 181 AYAGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVIR 240
Query: 1030 LLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEAKNHHADSITQRC 1089
+ ++ +++V+ L+ H + + D G L+ K++ ++ I ++
Sbjct: 241 QIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKL 300
Query: 1090 QQLQLKLDNLMALATKRKTKL 1110
QL K ++ R L
Sbjct: 301 LQLTEKRKEMIDKWEDRWEWL 321
Score = 182 bits (462), Expect = 7e-51
Identities = 69/316 (21%), Positives = 136/316 (43%), Gaps = 4/316 (1%)
Query: 904 LHQFFRDIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELAS-HQPAIQNVQ 962
L Q R++ D E WI E++++ GS + G+D V L+++ + + + Q + V
Sbjct: 8 LFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVN 67
Query: 963 ETGEKLMDVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESLTYQHFLAKVEEEEA 1022
++L++ + I + LN+AW++L +L R Q L S F +E
Sbjct: 68 HLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEIFG 127
Query: 1023 WISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEAKNHH- 1081
I +K + L E+ G V+ L + H FE D + + +L A
Sbjct: 128 RIQDKHKKLP-EELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGDK 186
Query: 1082 ADSITQRCQQLQLKLDNLMALATKRKTKLMDNSAYLQFMWKADVVESWIADKETHVKSEE 1141
AD I +R ++ +L+ R+ +L+D +F + W+ D ++++E
Sbjct: 187 ADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIEAQE 246
Query: 1142 YGRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTLKDQLVASNHDQTPAIVKRHGDVIA 1201
RD+S+V+ L+ + A + A + L L+A H + I ++ +
Sbjct: 247 KPRDVSSVELLMNNHQGIKAEIDARN-DSFTTCIELGKSLLARKHYASEEIKEKLLQLTE 305
Query: 1202 RWQKLLGDSNARKQRL 1217
+ ++++ R + L
Sbjct: 306 KRKEMIDKWEDRWEWL 321
Score = 177 bits (451), Expect = 2e-49
Identities = 66/310 (21%), Positives = 143/310 (46%), Gaps = 2/310 (0%)
Query: 590 KDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAI-NAHEEKIGALQTLADQ 648
++ + E W++ RE + E+ ++V L ++ +F + N +E++ + LAD+
Sbjct: 13 REVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNHLADE 72
Query: 649 LIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIAEK 708
LI + H A I + + + + W L E + + L S L +F DA E+ I +K
Sbjct: 73 LINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEIFGRIQDK 132
Query: 709 LQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEEAVQ 768
+ EE +D +++ + H FE ++ A +++ + L + +Q
Sbjct: 133 HKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYA-GDKADDIQ 191
Query: 769 ARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLDFWLGEVESLLTSEDSGKDL 828
R + + W+ L + ++L + + + + V+DL W+ +V + +++ +D+
Sbjct: 192 KRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIEAQEKPRDV 251
Query: 829 ASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDSGQFDASSIQEKRQSINERYERIK 888
+SV+ L+ HQ ++A+I A +D SL+ + + I+EK + E+ + +
Sbjct: 252 SSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQLTEKRKEMI 311
Query: 889 NLAAHRQARL 898
+ R L
Sbjct: 312 DKWEDRWEWL 321
Score = 172 bits (436), Expect = 2e-47
Identities = 62/317 (19%), Positives = 139/317 (43%), Gaps = 6/317 (1%)
Query: 691 LQQFSRDADEMENWIAEKLQLATEESY-KDPANIQSKHQKHQAFEAEL-AANADRIQSVL 748
L Q +R+ D++E WIAE+ +A +D ++ ++ + F + +R+ +V
Sbjct: 8 LFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVN 67
Query: 749 AMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDL 808
+ LI+ + + + W L + ++ L + + + K++
Sbjct: 68 HLADELINSGHS--DAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEI 125
Query: 809 DFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDS-GQ 867
+ + L E+ G+D +V+ L + H E DIQA +++ + A L +
Sbjct: 126 FGRIQDKHKKL-PEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAG 184
Query: 868 FDASSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQFFRDIADEESWIKEKKLLVGS 927
A IQ++ + E ++ + + R+ RL + +FF + D W+++ + +
Sbjct: 185 DKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIEA 244
Query: 928 DDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMDVSNLGVPEIEQRLKLLN 987
+ RD++ V+ L H+ ++AE+ + + E G+ L+ + EI+++L L
Sbjct: 245 QEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQLT 304
Query: 988 QAWSELKQLAANRGQKL 1004
+ E+ +R + L
Sbjct: 305 EKRKEMIDKWEDRWEWL 321
Score = 167 bits (425), Expect = 8e-46
Identities = 67/323 (20%), Positives = 138/323 (42%), Gaps = 13/323 (4%)
Query: 364 FYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAI-NAHEEKIGALQTLA 422
R+ + E W++ RE + E+ ++V L ++ +F + N +E++ + LA
Sbjct: 11 LNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNHLA 70
Query: 423 DQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIA 482
D+LI + H A I + + + + W L E + + L S L +F DA E+ I
Sbjct: 71 DELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEIFGRIQ 130
Query: 483 EKLQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEEA 542
+K + EE +D +++ + H FE ++ A +++ + L +
Sbjct: 131 DKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYA-GDKADD 189
Query: 543 VQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLPYFSKKDCEQAENWMSAR 602
+Q R + + W+ L + ++L + + + + V+DL WM
Sbjct: 190 IQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDL-----------MLWMEDV 238
Query: 603 EAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHYAAKPIDD 662
+ A+E +VE L+ H+ I+A + L L+A HYA++ I +
Sbjct: 239 IRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKE 298
Query: 663 KRKQVLDRWRLLKEALIEKRSRL 685
K Q+ ++ + + + ++ L
Sbjct: 299 KLLQLTEKRKEMIDKWEDRWEWL 321
Score = 141 bits (357), Expect = 6e-37
Identities = 63/331 (19%), Positives = 142/331 (42%), Gaps = 20/331 (6%)
Query: 467 LQQFSRDADEMENWIAEKLQLATEESY-KDPANIQSKHQKHQAFEAEL-AANADRIQSVL 524
L Q +R+ D++E WIAE+ +A +D ++ ++ + F + +R+ +V
Sbjct: 8 LFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVN 67
Query: 525 AMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDL 584
+ LI+ + + + W L + ++ L + + +
Sbjct: 68 HLADELINSGHS--DAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKF------- 118
Query: 585 PYFSKKDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQT 644
D ++ + + L EE+ + VE L + H F+ I A ++ LQ
Sbjct: 119 ----YHDAKEIFGRIQDKHKKLP-EELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQE 173
Query: 645 LADQLIAAD-HYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMEN 703
A +L AA A I + +VL+ W+ L +A +R RL ++ +F ++
Sbjct: 174 DAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLML 233
Query: 704 WIAEK-LQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVG 762
W+ + Q+ +E +D ++++ HQ +AE+ A D + + +G++L+ +
Sbjct: 234 WMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLAR--KHY 291
Query: 763 SEEAVQARLASIADQWEFLTQKTTEKSLKLK 793
+ E ++ +L + ++ + + K ++ L+
Sbjct: 292 ASEEIKEKLLQLTEKRKEMIDKWEDRWEWLR 322
Score = 94.2 bits (234), Expect = 1e-20
Identities = 43/280 (15%), Positives = 90/280 (32%), Gaps = 51/280 (18%)
Query: 233 EQVLNRYADFKSEARSKREKLEDITVKEVKILETAN-----DIQERREQVLNRYADFKSE 287
+ R+ +F + + ++ D L + I E ++ + +AD
Sbjct: 42 TMLQERFREFARDTGNIGQERVDTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLEL 101
Query: 288 ARSKREKLEDSRRFQYFKRDADELESWIYEKLQAASDESYKETTNLQAKIQKHQAFEAEV 347
++ + L S F DA E+ I +K + +E ++ ++ + H FE ++
Sbjct: 102 IDTRTQILAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDI 161
Query: 348 AAHSNAIVVLDNTGND-------------------------------------------- 363
A + L
Sbjct: 162 QALGTQVRQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDK 221
Query: 364 --FYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTL 421
F+ WM + A+E +VE L+ H+ I+A + L
Sbjct: 222 FRFFSMVRDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIEL 281
Query: 422 ADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRL 461
L+A HYA++ I +K Q+ ++ + + + ++ L
Sbjct: 282 GKSLLARKHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWL 321
Score = 83.8 bits (207), Expect = 3e-17
Identities = 52/365 (14%), Positives = 103/365 (28%), Gaps = 59/365 (16%)
Query: 1118 QFMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTL 1177
Q + D +E WIA++E S E G+D V L + F E + + L
Sbjct: 10 QLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNHL 69
Query: 1178 KDQLVASNHDQTPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQIEDLYLTFAKK 1237
D+L+ S H I + + W LL + R Q L E + D
Sbjct: 70 ADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHD-------- 121
Query: 1238 ASSFNKPQPLSRDMEMSLQDGRSYLEIPMPGNNVFSASSFNSWFENAEEDLTDPVRCNSI 1297
A ++ + L + +
Sbjct: 122 ------------------------------------AKEIFGRIQDKHKKLPEEL-GRDQ 144
Query: 1298 EEIRALREAHAQFQASLSSAQADFEALAALDQQIKSFNVGPNPYT-WFTMEALEDTWRNL 1356
+ L+ H F+ + + L ++++ G + + W++L
Sbjct: 145 NTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSL 204
Query: 1357 QKIIKERDIELAKEATRQDENDALRKEFAKHANAFHQWLTETRTSMM-----EGTGSLEQ 1411
+ R + L + F W+ + + S+E
Sbjct: 205 LDACESRRVRLVDTGDKF--------RFFSMVRDLMLWMEDVIRQIEAQEKPRDVSSVEL 256
Query: 1412 QLEAIKRKAAEVRSRRSDLKKIEDLGAILEEHLILDNRYTEHSTVGLAQQWDQLDQLGMR 1471
+ + AE+ +R +LG L + + + L ++ ++
Sbjct: 257 LMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQLTEKRKEMIDKWED 316
Query: 1472 MQHNL 1476
L
Sbjct: 317 RWEWL 321
Score = 63.0 bits (153), Expect = 2e-10
Identities = 18/137 (13%), Positives = 53/137 (38%), Gaps = 3/137 (2%)
Query: 1 MEQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTS 60
+ + W L + + L + + F ++I + + + + E+ G+D +
Sbjct: 88 KDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEIFGRIQDKH-KKLPEELGRDQNT 146
Query: 61 VQNLQKKHALLEADVASHLDRIESVKAATEQFLEHYGKDEDSSEALLKKHEALVSDLEAF 120
V+ LQ+ H E D+ + ++ ++ + Y D ++ + K+ ++ ++
Sbjct: 147 VETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYA--GDKADDIQKRENEVLEAWKSL 204
Query: 121 GNTILGLREQAQSCRQQ 137
+ R + +
Sbjct: 205 LDACESRRVRLVDTGDK 221
Score = 59.6 bits (144), Expect = 3e-09
Identities = 23/124 (18%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Query: 1 MEQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTS 60
+++ W+SL A E + +L + + F + D+ LW+ ++ Q+ +++ +D++S
Sbjct: 194 ENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIEAQEKPRDVSS 253
Query: 61 VQNLQKKHALLEADVASHLDRIESVKAATEQFLEHYGKDEDSSEALLKKHEALVSDLEAF 120
V+ L H ++A++ + D + + L + +SE + +K L +
Sbjct: 254 VELLMNNHQGIKAEIDARNDSFTTCIELGKSLLA---RKHYASEEIKEKLLQLTEKRKEM 310
Query: 121 GNTI 124
+
Sbjct: 311 IDKW 314
Score = 54.9 bits (132), Expect = 8e-08
Identities = 30/175 (17%), Positives = 68/175 (38%), Gaps = 6/175 (3%)
Query: 217 KEVKILETANDIQERREQVLNRYADFKSEARSKREKLEDITVKEVKILET-----ANDIQ 271
K K+ E Q E + + F+ + ++ ++ + ++ A+DIQ
Sbjct: 132 KHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGDKADDIQ 191
Query: 272 ERREQVLNRYADFKSEARSKREKLEDSRRFQYFKRDADELESWIYEK-LQAASDESYKET 330
+R +VL + S+R +L D+ F +L W+ + Q + E ++
Sbjct: 192 KRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIEAQEKPRDV 251
Query: 331 TNLQAKIQKHQAFEAEVAAHSNAIVVLDNTGNDFYRDCEQAENWMSAREAFLNAE 385
++++ + HQ +AE+ A +++ G A + + L +
Sbjct: 252 SSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQLTEK 306
Score = 39.2 bits (91), Expect = 0.008
Identities = 24/214 (11%), Positives = 61/214 (28%), Gaps = 14/214 (6%)
Query: 1274 ASSFNSWFENAEEDLTDPVRCNSIEEIRALREAHAQFQASLSSA-QADFEALAALDQQIK 1332
W E E + L+E +F + Q + + L ++
Sbjct: 15 VDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNHLADELI 74
Query: 1333 SFNVGPNPYTWFTMEALEDTWRNLQKIIKERDIELAKEATRQDENDALRKEFAKHANAFH 1392
+ + L + W +L ++I R LA +F A
Sbjct: 75 NSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELH--------KFYHDAKEIF 126
Query: 1393 QWLTETRTSMMEGTG----SLEQQLEAIKRKAAEVRSRRSDLKKIEDLGA-ILEEHLILD 1447
+ + + E G ++E ++++ + ++++++ A + +
Sbjct: 127 GRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGDK 186
Query: 1448 NRYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQ 1481
+ + + W L + L
Sbjct: 187 ADDIQKRENEVLEAWKSLLDACESRRVRLVDTGD 220
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein,
muscle, Z- LINE, actin-binding protein; 2.8A {Homo
sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Length = 476
Score = 187 bits (476), Expect = 4e-51
Identities = 113/500 (22%), Positives = 207/500 (41%), Gaps = 63/500 (12%)
Query: 1011 QHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSA 1070
+ + E WI L TM A+Q L+ + + +
Sbjct: 14 EEYERLASELLEWIRRTIPWLENRTPEKTMQAMQKKLEDFRDYRRKHKPPKVQEKCQLEI 73
Query: 1071 GNKLIEAK------NHHADSITQRCQQLQLKLDNLMALATKRKTKLMDNSAYL------- 1117
++ K S + + L + L++ L
Sbjct: 74 NFNTLQTKLRISNRPAFMPSEGKMVSDIAGAWQRLEQAEKGYEEWLLNEIRRLERLEHLA 133
Query: 1118 -QFMWKADVVESWIADKETHVKSEEY-GRDLSTVQTLLTKQETFDAGLHAFEHEGIQNIT 1175
+F KA E+W KE + ++Y L+ V+ LL K E F++ L A + ++ I
Sbjct: 134 EKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDR-VEQIA 192
Query: 1176 TLKDQLVASNHDQTPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQIEDLYLTFA 1235
+ +L ++ + R + +W +L + R++ L RM++ I+ L+L FA
Sbjct: 193 AIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFA 252
Query: 1236 KKASSFNKPQPLSRDMEMSLQDGRSYLEIPMPGNNVFSASSFNSWFENAEEDLTDPVRCN 1295
K+A+ FN +W E A EDL D +
Sbjct: 253 KRAAPFN------------------------------------NWMEGAMEDLQDMFIVH 276
Query: 1296 SIEEIRALREAHAQFQASLSSAQADFEALAALDQQI-------KSFNVGPNPYTWFTMEA 1348
SIEEI++L AH QF+A+L A + +++ A+ ++ NPY+ TM+
Sbjct: 277 SIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDE 336
Query: 1349 LEDTWRNLQKIIKERDIELAKEATRQDENDALRKEFAKHANAFHQWLTET----RTSMME 1404
L W +++++ RD L +E RQ N+ LR++FA ANA W+ S ++
Sbjct: 337 LRTKWDKVKQLVPIRDQSLQEELARQHANERLRRQFAAQANAIGPWIQNKMEEIARSSIQ 396
Query: 1405 GTGSLEQQLEAIKRKAAEVRSRRSDLKKIEDLGAILEEHLILDNRYTEHSTVGLAQQWDQ 1464
TG+LE Q+ +K+ + + ++++ K+E +++E L+ DN++T ++ + W+
Sbjct: 397 ITGALEDQMNQLKQYEHNIINYKNNIDKLEGDHQLIQEALVFDNKHTNYTMEHIRVGWEL 456
Query: 1465 LDQLGMRMQHNLEQQIQARN 1484
L R + +E QI R+
Sbjct: 457 LLTTIARTINEVETQILTRD 476
Score = 142 bits (359), Expect = 6e-36
Identities = 80/461 (17%), Positives = 173/461 (37%), Gaps = 28/461 (6%)
Query: 676 EALIEKRSRLGESQTLQQFSRDADEMENWIAEKLQLATEESYKDPANIQSKHQKHQAFE- 734
E L+E+ RL S+ L+ R +EN EK A ++ +D + + KH+ + E
Sbjct: 10 ERLMEEYERLA-SELLEWIRRTIPWLENRTPEKTMQAMQKKLEDFRDYRRKHKPPKVQEK 68
Query: 735 AELAANADRIQSVLAMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKE 794
+L N + +Q+ L + + + + + + +L+
Sbjct: 69 CQLEINFNTLQTKLRISNRPAFMPSEGKMVSDIAGAWQRLEQAEKGYEEWLLNEIRRLER 128
Query: 795 ANKQ-RTYIAAVKDLDFWLGEVESLLTSED-SGKDLASVQNLIKKHQLVEADIQAHDDRI 852
+ + W E +L +D L V+ L++KH+ E+D+ AH DR+
Sbjct: 129 LEHLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRV 188
Query: 853 KDMNGQADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQ------ 906
+ + A L + DA ++ ++ Q I ++++R+ L R+ L L +
Sbjct: 189 EQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLH 248
Query: 907 --FFRDIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQET 964
F + A +W++ + + +Q+L H++ +A L Q++
Sbjct: 249 LEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAI 308
Query: 965 GEKLMDV-------SNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESLT-------- 1009
++ V + P + L W ++KQL R Q L E L
Sbjct: 309 QNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHANERL 368
Query: 1010 YQHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICS 1069
+ F A+ WI K + ++ T A++ + + +E + +++ +
Sbjct: 369 RRQFAAQANAIGPWIQNKMEEIARSSIQIT-GALEDQMNQLKQYEHNIINYKNNIDKLEG 427
Query: 1070 AGNKLIEAKNHHADSITQRCQQLQLKLDNLMALATKRKTKL 1110
+ EA + +++ + L+ + ++
Sbjct: 428 DHQLIQEALVFDNKHTNYTMEHIRVGWELLLTTIARTINEV 468
Score = 128 bits (323), Expect = 3e-31
Identities = 68/458 (14%), Positives = 157/458 (34%), Gaps = 42/458 (9%)
Query: 590 KDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGA-----LQT 644
+ + W+ +L + ++ ++ D+ + + + T
Sbjct: 18 RLASELLEWIRRTIPWLENRTPEKTMQAMQKKLEDFRDYRRKHKPPKVQEKCQLEINFNT 77
Query: 645 LADQLIAADHYAAKP--------IDDKRKQVLDRWRLLKEALIEKRSRLGESQTL-QQFS 695
L +L ++ A P I +++ + +E L+ + RL + L ++F
Sbjct: 78 LQTKLRISNRPAFMPSEGKMVSDIAGAWQRLEQAEKGYEEWLLNEIRRLERLEHLAEKFR 137
Query: 696 RDADEMENWIAEKLQLATEESY--KDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQN 753
+ A E W K Q+ ++ Y +++ +KH+AFE++LAA+ DR++ + A+ Q
Sbjct: 138 QKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQE 197
Query: 754 LIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEA--------NKQRTYIAAV 805
L + V R I DQW+ L T ++ L+ +
Sbjct: 198 LNELDYH--DAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRA 255
Query: 806 KDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDS 865
+ W+ L + +Q+LI H+ +A + D + + + +
Sbjct: 256 APFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKV 315
Query: 866 GQFDASS-------IQEKRQSINERYERIKNLAAHRQARLNEA--------NTLHQFFRD 910
Q + +++++K L R L E QF
Sbjct: 316 IQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHANERLRRQFAAQ 375
Query: 911 IADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMD 970
WI+ K + +++ + K+ E + +++ I ++ + + +
Sbjct: 376 ANAIGPWIQNKMEEIARSSIQ-ITGALEDQMNQLKQYEHNIINYKNNIDKLEGDHQLIQE 434
Query: 971 VSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESL 1008
++ + W L A +++ +
Sbjct: 435 ALVFDNKHTNYTMEHIRVGWELLLTTIARTINEVETQI 472
Score = 118 bits (295), Expect = 9e-28
Identities = 89/480 (18%), Positives = 169/480 (35%), Gaps = 61/480 (12%)
Query: 911 IADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMD 970
I W++ + + L ++ ++KHK + + N +T ++ +
Sbjct: 27 IRRTIPWLENRTPEKTMQAMQKKLEDFRDYRRKHKPPKVQEKCQLEINFNTLQTKLRISN 86
Query: 971 VSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESLT--------YQHFLAKVEEEEA 1022
+P + + + AW L+Q + L + + F K E
Sbjct: 87 RPAF-MPSEGKMVSDIAGAWQRLEQAEKGYEEWLLNEIRRLERLEHLAEKFRQKASTHET 145
Query: 1023 WISEKQQLLSVEDY-GDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEAKNHH 1081
W K+Q+L +DY ++ V+ LL+KH+AFE+D + H+DR I + +L E H
Sbjct: 146 WAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHD 205
Query: 1082 ADSITQRCQQLQLKLDNLMALATKRKTKLMDNSA--------YLQFMWKADVVESWIADK 1133
A ++ RCQ++ + D L L KR+ L +L+F +A +W+
Sbjct: 206 AVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGA 265
Query: 1134 ETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEG------IQNITTLKDQLVASNHD 1187
++ + +Q+L+T E F A L + E + +
Sbjct: 266 MEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISS 325
Query: 1188 QTPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQIEDLYLTFAKKASSFNKPQPL 1247
P ++ +W K+ R Q L + E L FA +
Sbjct: 326 SNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHANERLRRQFAAQ---------- 375
Query: 1248 SRDMEMSLQDGRSYLEIPMPGNNVFSASSFNSWFENAEEDLTDPVRCNSIEEIRALREAH 1307
A++ W +N E++ +
Sbjct: 376 --------------------------ANAIGPWIQNKMEEIARSSI-QITGALEDQMNQL 408
Query: 1308 AQFQASLSSAQADFEALAALDQQIKSFNVGPNPYTWFTMEALEDTWRNLQKIIKERDIEL 1367
Q++ ++ + + + + L Q I+ V N +T +TME + W L I E+
Sbjct: 409 KQYEHNIINYKNNIDKLEGDHQLIQEALVFDNKHTNYTMEHIRVGWELLLTTIARTINEV 468
Score = 115 bits (289), Expect = 5e-27
Identities = 76/473 (16%), Positives = 175/473 (36%), Gaps = 24/473 (5%)
Query: 228 IQERREQVLNRYADFKSEARSKREKLEDITVKEVKILETANDIQERREQVLNRYADFKSE 287
+ + E+++ Y SE + ++ +T +Q++ E + K
Sbjct: 5 VNQENERLMEEYERLASELLEWIRRTIP-WLENRTPEKTMQAMQKKLEDFRDYRRKHKPP 63
Query: 288 ARSKREKLEDSRRFQYFKRDADELESWIYEKLQAASDESYKETTNLQAKIQKHQAFEAEV 347
++ +LE + K +++ + + SD + QA+ + E+
Sbjct: 64 KVQEKCQLEINFNTLQTKLRISNRPAFMPSEGKMVSDIAGAWQRLEQAEKGYEEWLLNEI 123
Query: 348 AAHSNAIVVLDNTGNDFYRDCEQAENWMSAREAFLNAEEVDSKT-DNVEALIKKHEDFDK 406
L++ F + E W +E L ++ +S + V AL++KHE F+
Sbjct: 124 RRLER----LEHLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFES 179
Query: 407 AINAHEEKIGALQTLADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQT 466
+ AH++++ + +A +L D++ A ++D+ +++ D+W L ++R L +
Sbjct: 180 DLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEK 239
Query: 467 LQQ--------FSRDADEMENWIAEKL-QLATEESYKDPANIQSKHQKHQAFEAELAANA 517
L + F++ A NW+ + L IQS H+ F+A L
Sbjct: 240 LLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEAD 299
Query: 518 DRIQSVLAMGQNLIDKRQ-----CVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEAN 572
QS++A+ + Q S + + +W+ + Q + L+E
Sbjct: 300 GERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEEL 359
Query: 573 KQRTYIAAVKDLPYFSKKDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAI 632
++ A + L W+ + + + +E + + + ++ I
Sbjct: 360 ARQH---ANERLRRQFAAQANAIGPWIQNKMEEIARSSIQITGA-LEDQMNQLKQYEHNI 415
Query: 633 NAHEEKIGALQTLADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRL 685
++ I L+ + A + K + + + W LL + + +
Sbjct: 416 INYKNNIDKLEGDHQLIQEALVFDNKHTNYTMEHIRVGWELLLTTIARTINEV 468
Score = 58.7 bits (141), Expect = 9e-09
Identities = 62/382 (16%), Positives = 134/382 (35%), Gaps = 54/382 (14%)
Query: 1123 ADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTLKDQLV 1182
A + WI +++ + + +Q L + + + + + L
Sbjct: 20 ASELLEWIRRTIPWLENRTPEKTMQAMQKKLEDFRDYRRKHKPPKVQEKCQLEINFNTLQ 79
Query: 1183 A-----SNHDQTPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQIEDLYLTFAKK 1237
+ P+ K D+ WQ+L ++ LL + ++E L F +K
Sbjct: 80 TKLRISNRPAFMPSEGKMVSDIAGAWQRLEQAEKGYEEWLLNEIRRLERLEHLAEKFRQK 139
Query: 1238 ASSFNKPQPLSRDMEMSLQDGRSYLEIPMPGNNVFSASSFNSWFENAEEDLTDP-VRCNS 1296
AS+ +W E+ L S
Sbjct: 140 ASTHE------------------------------------TWAYGKEQILLQKDYESAS 163
Query: 1297 IEEIRALREAHAQFQASLSSAQADFEALAALDQQIKSFNVGPNPYTWFTMEALEDTWRNL 1356
+ E+RAL H F++ L++ Q E +AA+ Q++ + + + D W L
Sbjct: 164 LTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRL 223
Query: 1357 QKIIKERDIELAKEATRQDENDALRKEFAKHANAFHQWLTETRTSMMEGT-----GSLEQ 1411
+ ++R L + + D L EFAK A F+ W+ + + ++
Sbjct: 224 GTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQS 283
Query: 1412 QLEAIKRKAAEVRSRRSDLKKIEDLGAILEE-------HLILDNRYTEHSTVGLAQQWDQ 1464
+ A ++ A + + + I + +E+ + N Y+ + L +WD+
Sbjct: 284 LITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDK 343
Query: 1465 LDQLGMRMQHNLEQQIQARNQS 1486
+ QL +L++++ ++ +
Sbjct: 344 VKQLVPIRDQSLQEELARQHAN 365
Score = 48.7 bits (115), Expect = 1e-05
Identities = 58/545 (10%), Positives = 168/545 (30%), Gaps = 108/545 (19%)
Query: 35 IEDIELWLSEIEGQLMSEDYGKDLTSVQNLQKKHALLE----ADVASHLDRIESVKAATE 90
I WL + + K L ++ ++KH + + + + +++ +
Sbjct: 27 IRRTIPWLENRTPEKTMQAMQKKLEDFRDYRRKHKPPKVQEKCQLEINFNTLQTKLRISN 86
Query: 91 Q--FLEHYGKDEDSSEALLKKHEALVSDLEAFGNTILGLREQAQSCRQQETPVIDVTGKE 148
+ F+ GK ++ E E + + E+ + ++
Sbjct: 87 RPAFMPSEGKMVSDIAGAWQRLEQAEKGYEEWLLNEIRRLERLEHLAEK----------- 135
Query: 149 CVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEAGLTA 208
+ + + K +L + + +V R+ + + + +
Sbjct: 136 -----FRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQ 190
Query: 209 SQQNLADVKEVKILETANDIQERREQVLNRYADFKSEARSKREKLEDITVKEVKILETAN 268
++ E+ + A ++ +R +++ +++ + + +RE LE + I +
Sbjct: 191 IAAIAQELNELDYHD-AVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHL 249
Query: 269 DIQERREQVLNRYADFKSEARSKREKLEDSRRFQYFKRDADELESWIYEKLQAASDESYK 328
+ F + A +W+ ++ D
Sbjct: 250 E----------------------------------FAKRAAPFNNWMEGAMEDLQDMFIV 275
Query: 329 ETTN-LQAKIQKHQAFEAEVAAHSNAIVVLDNTGNDFYRDCEQAENWMSAREAFLNAEEV 387
+ +Q+ I H+ F+A +
Sbjct: 276 HSIEEIQSLITAHEQFKATLPEADG----------------------------------- 300
Query: 388 DSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHYAAKPIDDKRKQVLDRW 447
++++ + +K I ++ +I + + + + K +V
Sbjct: 301 -----ERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDE-------LRTKWDKVKQLV 348
Query: 448 RLLKEALIEKRSRLGESQTL-QQFSRDADEMENWIAEKLQLATEESYKDPANIQSKHQKH 506
+ ++L E+ +R ++ L +QF+ A+ + WI K++ S + ++ + +
Sbjct: 349 PIRDQSLQEELARQHANERLRRQFAAQANAIGPWIQNKMEEIARSSIQITGALEDQMNQL 408
Query: 507 QAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSL 566
+ +E + + I + Q + + V + + I WE L
Sbjct: 409 KQYEHNIINYKNNIDKLEGDHQLIQE--ALVFDNKHTNYTMEHIRVGWELLLTTIARTIN 466
Query: 567 KLKEA 571
+++
Sbjct: 467 EVETQ 471
Score = 47.6 bits (112), Expect = 3e-05
Identities = 55/363 (15%), Positives = 121/363 (33%), Gaps = 29/363 (7%)
Query: 20 NKLQEASQQQGFNRTIEDIELWLSEIEGQLMS--EDYGKDLTSVQNLQKKHALLEADVAS 77
S + F + + ++ +L + Y + L + ++ L
Sbjct: 79 QTKLRISNRPAFMPSEGKMVSDIAGAWQRLEQAEKGYEEWLLNEIRRLERLEHLAEKFRQ 138
Query: 78 HLDRIESVKAATEQFL---EHYGKDEDSSEALLKKHEALVSDLEAFGNTILGLREQAQSC 134
E+ EQ L ++ ALL+KHEA SDL A + + + AQ
Sbjct: 139 KASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQEL 198
Query: 135 RQQETPVIDVTGKEC--VIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQG 192
+ + C + +D ++ + LL E D+
Sbjct: 199 NELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLL----------ETIDQLH 248
Query: 193 FVPAAYVKKMEAGLTASQQNLADVKEVKILETANDIQERREQ----VLNRYADFKSEARS 248
A + + ++L D+ V +E + EQ + + +S
Sbjct: 249 LEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAI 308
Query: 249 KREKLEDITVKEVKILETANDIQERREQVLNRYADFKSEARSKREKLEDSRRFQY----- 303
+ E + I ++I + +++ ++ K + + L++ Q+
Sbjct: 309 QNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHANERL 368
Query: 304 ---FKRDADELESWIYEKLQAASDESYKETTNLQAKIQKHQAFEAEVAAHSNAIVVLDNT 360
F A+ + WI K++ + S + T L+ ++ + + +E + + N I L+
Sbjct: 369 RRQFAAQANAIGPWIQNKMEEIARSSIQITGALEDQMNQLKQYEHNIINYKNNIDKLEGD 428
Query: 361 GND 363
Sbjct: 429 HQL 431
Score = 43.7 bits (102), Expect = 4e-04
Identities = 18/138 (13%), Positives = 41/138 (29%), Gaps = 8/138 (5%)
Query: 1 MEQIVHLWESLATATEKKGNKLQEASQQQ--------GFNRTIEDIELWLSEIEGQLMSE 52
++I W+ L T T+K+ L+ + F + W+ L
Sbjct: 213 CQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDM 272
Query: 53 DYGKDLTSVQNLQKKHALLEADVASHLDRIESVKAATEQFLEHYGKDEDSSEALLKKHEA 112
+ +Q+L H +A + +S+ A + + +
Sbjct: 273 FIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTV 332
Query: 113 LVSDLEAFGNTILGLREQ 130
+ +L + + L
Sbjct: 333 TMDELRTKWDKVKQLVPI 350
Score = 34.9 bits (79), Expect = 0.24
Identities = 13/117 (11%), Positives = 42/117 (35%), Gaps = 9/117 (7%)
Query: 1 MEQIVHLWESLATATEKKGNKLQEASQQQG--------FNRTIEDIELWLSEIEGQLMSE 52
M+++ W+ + + LQE +Q F I W+ + ++
Sbjct: 334 MDELRTKWDKVKQLVPIRDQSLQEELARQHANERLRRQFAAQANAIGPWIQNKM-EEIAR 392
Query: 53 DYGKDLTSVQNLQKKHALLEADVASHLDRIESVKAATEQFLEHYGKDEDSSEALLKK 109
+ ++++ + E ++ ++ + I+ ++ + E D + ++
Sbjct: 393 SSIQITGALEDQMNQLKQYEHNIINYKNNIDKLEGDHQLIQEALVFDNKHTNYTMEH 449
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical
linker region, 2 tandem 3-helix coiled- coils, structural
protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB:
1aj3_A
Length = 213
Score = 176 bits (447), Expect = 3e-50
Identities = 136/212 (64%), Positives = 171/212 (80%)
Query: 904 LHQFFRDIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQE 963
+HQFFRD+ DEESWIKEKKLLV S+DYGRDLTGVQNL+KKHKRLEAELA+H+PAIQ+V +
Sbjct: 2 VHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLD 61
Query: 964 TGEKLMDVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESLTYQHFLAKVEEEEAW 1023
TG+KL D + +G EI+QRL W ELKQLAA RGQ+L+ESL YQ F+A VEEEEAW
Sbjct: 62 TGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAW 121
Query: 1024 ISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEAKNHHAD 1083
I+EK L++ EDYGDT+AA+QGLLKKH+AFETDF+VH+DR D+C+ G LI+ NHH +
Sbjct: 122 INEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVE 181
Query: 1084 SITQRCQQLQLKLDNLMALATKRKTKLMDNSA 1115
+IT + + L+ K+ +L A +RK KL +NSA
Sbjct: 182 NITAKMKGLKGKVSDLEKAAAQRKAKLDENSA 213
Score = 148 bits (375), Expect = 1e-40
Identities = 74/208 (35%), Positives = 115/208 (55%)
Query: 801 YIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQAD 860
+ + D + W+ E + L++SED G+DL VQNL KKH+ +EA++ AH+ I+ +
Sbjct: 5 FFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDTGK 64
Query: 861 SLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQFFRDIADEESWIKE 920
L D IQ++ + ++ +K LAA R RL E+ QF ++ +EE+WI E
Sbjct: 65 KLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINE 124
Query: 921 KKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMDVSNLGVPEIE 980
K LV S+DYG L +Q L KKH+ E + H+ + +V GE L+ +N V I
Sbjct: 125 KMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENIT 184
Query: 981 QRLKLLNQAWSELKQLAANRGQKLDESL 1008
++K L S+L++ AA R KLDE+
Sbjct: 185 AKMKGLKGKVSDLEKAAAQRKAKLDENS 212
Score = 131 bits (330), Expect = 2e-34
Identities = 74/212 (34%), Positives = 118/212 (55%), Gaps = 3/212 (1%)
Query: 691 LQQFSRDADEMENWIAEKLQLATEESY-KDPANIQSKHQKHQAFEAELAANADRIQSVLA 749
+ QF RD D+ E+WI EK L + E Y +D +Q+ +KH+ EAELAA+ IQSVL
Sbjct: 2 VHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLD 61
Query: 750 MGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLD 809
G+ L D +E +Q RLA D W+ L Q + +L+E+ + + ++A V++ +
Sbjct: 62 TGKKLSDDNTI--GKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEE 119
Query: 810 FWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDSGQFD 869
W+ E +L+ SED G LA++Q L+KKH+ E D H DR+ D+ + LI
Sbjct: 120 AWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHH 179
Query: 870 ASSIQEKRQSINERYERIKNLAAHRQARLNEA 901
+I K + + + ++ AA R+A+L+E
Sbjct: 180 VENITAKMKGLKGKVSDLEKAAAQRKAKLDEN 211
Score = 127 bits (320), Expect = 3e-33
Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 1/207 (0%)
Query: 1011 QHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSA 1070
F +++EE+WI EK+ L+S EDYG + VQ L KKH E + + H +
Sbjct: 3 HQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDT 62
Query: 1071 GNKLIEAKNHHADSITQRCQQLQLKLDNLMALATKRKTKLMDNSAYLQFMWKADVVESWI 1130
G KL + + I QR Q L LA R +L ++ Y QF+ + E+WI
Sbjct: 63 GKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWI 122
Query: 1131 ADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTLKDQLVASNHDQTP 1190
+K T V SE+YG L+ +Q LL K E F+ + + + ++ + L+ N+
Sbjct: 123 NEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHK-DRVNDVCANGEDLIKKNNHHVE 181
Query: 1191 AIVKRHGDVIARWQKLLGDSNARKQRL 1217
I + + + L + RK +L
Sbjct: 182 NITAKMKGLKGKVSDLEKAAAQRKAKL 208
Score = 124 bits (312), Expect = 4e-32
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 3/210 (1%)
Query: 363 DFYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLA 422
F+RD + E+W+ ++ +++E+ V+ L KKH+ + + AHE I ++
Sbjct: 4 QFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDTG 63
Query: 423 DQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIA 482
+L + + I + Q +D W+ LK+ + RL ES QQF + +E E WI
Sbjct: 64 KKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWIN 123
Query: 483 EKL-QLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEE 541
EK+ +A+E+ A IQ +KH+AFE + + DR+ V A G++LI + E
Sbjct: 124 EKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIK--KNNHHVE 181
Query: 542 AVQARLASIADQWEFLTQKTTEKSLKLKEA 571
+ A++ + + L + ++ KL E
Sbjct: 182 NITAKMKGLKGKVSDLEKAAAQRKAKLDEN 211
Score = 120 bits (301), Expect = 1e-30
Identities = 62/223 (27%), Positives = 116/223 (52%), Gaps = 14/223 (6%)
Query: 467 LQQFSRDADEMENWIAEKLQLATEESY-KDPANIQSKHQKHQAFEAELAANADRIQSVLA 525
+ QF RD D+ E+WI EK L + E Y +D +Q+ +KH+ EAELAA+ IQSVL
Sbjct: 2 VHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLD 61
Query: 526 MGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLP 585
G+ L D +E +Q RLA D W+ L Q + +L+E+ + + ++
Sbjct: 62 TGKKLSDDNTI--GKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFV------- 112
Query: 586 YFSKKDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTL 645
+ E+ E W++ + + +E+ ++ L+KKHE F+ H++++ +
Sbjct: 113 ----ANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCAN 168
Query: 646 ADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGES 688
+ LI +++ + I K K + + L++A +++++L E+
Sbjct: 169 GEDLIKKNNHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDEN 211
Score = 119 bits (300), Expect = 1e-30
Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 3/207 (1%)
Query: 590 KDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQL 649
+D + E+W+ ++ +++E+ V+ L KKH+ + + AHE I ++ +L
Sbjct: 7 RDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDTGKKL 66
Query: 650 IAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIAEKL 709
+ + I + Q +D W+ LK+ + RL ES QQF + +E E WI EK+
Sbjct: 67 SDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKM 126
Query: 710 -QLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEEAVQ 768
+A+E+ A IQ +KH+AFE + + DR+ V A G++LI + E +
Sbjct: 127 TLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIK--KNNHHVENIT 184
Query: 769 ARLASIADQWEFLTQKTTEKSLKLKEA 795
A++ + + L + ++ KL E
Sbjct: 185 AKMKGLKGKVSDLEKAAAQRKAKLDEN 211
Score = 86.5 bits (214), Expect = 5e-19
Identities = 48/209 (22%), Positives = 89/209 (42%), Gaps = 46/209 (22%)
Query: 302 QYFKRDADELESWIYEKLQAASDESY-KETTNLQAKIQKHQAFEAEVAAHSNAIVVLDNT 360
F RD D+ ESWI EK S E Y ++ T +Q +KH+ EAE+AAH AI + +T
Sbjct: 3 HQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDT 62
Query: 361 GND---------------------------------------------FYRDCEQAENWM 375
G F + E+ E W+
Sbjct: 63 GKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWI 122
Query: 376 SAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHYAAKP 435
+ + + +E+ ++ L+KKHE F+ H++++ + + LI +++ +
Sbjct: 123 NEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVEN 182
Query: 436 IDDKRKQVLDRWRLLKEALIEKRSRLGES 464
I K K + + L++A +++++L E+
Sbjct: 183 ITAKMKGLKGKVSDLEKAAAQRKAKLDEN 211
Score = 71.5 bits (175), Expect = 6e-14
Identities = 51/250 (20%), Positives = 87/250 (34%), Gaps = 45/250 (18%)
Query: 1118 QFMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTL 1177
QF D ESWI +K+ V SE+YGRDL+ VQ L K + +A L A E IQ++
Sbjct: 4 QFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPA-IQSVLDT 62
Query: 1178 KDQLVASNHDQTPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQIEDLYLTFAKK 1237
+L N I +R + W++L + AR QRL E + + +
Sbjct: 63 GKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVAN-------- 114
Query: 1238 ASSFNKPQPLSRDMEMSLQDGRSYLEIPMPGNNVFSASSFNSWFENAEEDLTDPVRCNSI 1297
+W + +++
Sbjct: 115 ------------------------------------VEEEEAWINEKMTLVASEDYGDTL 138
Query: 1298 EEIRALREAHAQFQASLSSAQADFEALAALDQQIKSFNVGPNPYTWFTMEALEDTWRNLQ 1357
I+ L + H F+ + + + A + + N M+ L+ +L+
Sbjct: 139 AAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKGKVSDLE 198
Query: 1358 KIIKERDIEL 1367
K +R +L
Sbjct: 199 KAAAQRKAKL 208
Score = 66.5 bits (162), Expect = 3e-12
Identities = 34/109 (31%), Positives = 54/109 (49%)
Query: 1 MEQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTS 60
+ Q V W+ L +G +L+E+ + Q F +E+ E W++E + SEDYG L +
Sbjct: 81 LAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAA 140
Query: 61 VQNLQKKHALLEADVASHLDRIESVKAATEQFLEHYGKDEDSSEALLKK 109
+Q L KKH E D H DR+ V A E ++ ++ A +K
Sbjct: 141 IQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKG 189
Score = 58.0 bits (140), Expect = 3e-09
Identities = 33/156 (21%), Positives = 75/156 (48%), Gaps = 5/156 (3%)
Query: 233 EQVLNRYADFKSEARSKREKLEDITVKEVKILET----ANDIQERREQVLNRYADFKSEA 288
+ + ++ ++E + ++ + K+ + +IQ+R Q ++ + + K A
Sbjct: 36 QNLRKKHKRLEAELAAHEPAIQSVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLA 95
Query: 289 RSKREKLEDSRRFQYFKRDADELESWIYEKLQAASDESYKET-TNLQAKIQKHQAFEAEV 347
++ ++LE+S +Q F + +E E+WI EK+ + E Y +T +Q ++KH+AFE +
Sbjct: 96 AARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDF 155
Query: 348 AAHSNAIVVLDNTGNDFYRDCEQAENWMSAREAFLN 383
H + + + G D + ++A+ L
Sbjct: 156 TVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLK 191
Score = 53.4 bits (128), Expect = 1e-07
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 29 QGFNRTIEDIELWLSEIEGQLMSEDYGKDLTSVQNLQKKHALLEADVASHLDRIESVKAA 88
F R ++D E W+ E + + SEDYG+DLT VQNL+KKH LEA++A+H I+SV
Sbjct: 3 HQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDT 62
Query: 89 TEQFLEHYGKDEDSSEALLKK 109
++ + ++ + L +
Sbjct: 63 GKKLSDDNTIGKEEIQQRLAQ 83
Score = 46.8 bits (111), Expect = 2e-05
Identities = 27/210 (12%), Positives = 72/210 (34%), Gaps = 13/210 (6%)
Query: 1274 ASSFNSWFENAEEDLTDPVRCNSIEEIRALREAHAQFQASLSSAQADFEALAALDQQIKS 1333
SW + + ++ + ++ LR+ H + +A L++ + +++ +++
Sbjct: 9 MDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDTGKKLSD 68
Query: 1334 FNVGPNPYTWFTMEALEDTWRNLQKIIKERDIELAKEATRQDENDALRKEFAKHANAFHQ 1393
N + D W+ L+++ R L + Q +F +
Sbjct: 69 DNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQ--------QFVANVEEEEA 120
Query: 1394 WLTETRTSMM-EGTGSLEQQLEAIKRK----AAEVRSRRSDLKKIEDLGAILEEHLILDN 1448
W+ E T + E G ++ + +K + + + + G L +
Sbjct: 121 WINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHV 180
Query: 1449 RYTEHSTVGLAQQWDQLDQLGMRMQHNLEQ 1478
GL + L++ + + L++
Sbjct: 181 ENITAKMKGLKGKVSDLEKAAAQRKAKLDE 210
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin,
alpha-helical linker region, 3-helix coiled coil,
structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1
a.7.1.1
Length = 216
Score = 171 bits (435), Expect = 2e-48
Identities = 143/214 (66%), Positives = 178/214 (83%)
Query: 795 ANKQRTYIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKD 854
ANKQ+ + +KD DFWL EVE+LL SED GKDLASV NL+KKHQL+EADI AH+DR+KD
Sbjct: 2 ANKQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKD 61
Query: 855 MNGQADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQFFRDIADE 914
+N QADSL+ S FD S +++KR++IN R++RIK++AA R+A+LNE++ LHQFFRD+ DE
Sbjct: 62 LNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDE 121
Query: 915 ESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMDVSNL 974
ESWIKEKKLLV S+DYGRDLTGVQNL+KKHKRLEAELA+H+PAIQ V +TG+KL D + +
Sbjct: 122 ESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTI 181
Query: 975 GVPEIEQRLKLLNQAWSELKQLAANRGQKLDESL 1008
G EI+QRL W ELKQLAA RGQ+L+ESL
Sbjct: 182 GKEEIQQRLAQFVDHWKELKQLAAARGQRLEESL 215
Score = 146 bits (369), Expect = 1e-39
Identities = 69/213 (32%), Positives = 111/213 (52%)
Query: 901 ANTLHQFFRDIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQN 960
AN F I D + W+ E + L+ S+DYG+DL V NL KKH+ LEA++++H+ +++
Sbjct: 2 ANKQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKD 61
Query: 961 VQETGEKLMDVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESLTYQHFLAKVEEE 1020
+ + LM S +++ + + +N + +K +AA R KL+ES F +++E
Sbjct: 62 LNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDE 121
Query: 1021 EAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEAKNH 1080
E+WI EK+ L+S EDYG + VQ L KKH E + + H + G KL +
Sbjct: 122 ESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTI 181
Query: 1081 HADSITQRCQQLQLKLDNLMALATKRKTKLMDN 1113
+ I QR Q L LA R +L ++
Sbjct: 182 GKEEIQQRLAQFVDHWKELKQLAAARGQRLEES 214
Score = 124 bits (313), Expect = 3e-32
Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 1/207 (0%)
Query: 1011 QHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSA 1070
Q+F +++ + W+SE + LL+ EDYG +A+V LLKKH E D S H DR D+ S
Sbjct: 6 QNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQ 65
Query: 1071 GNKLIEAKNHHADSITQRCQQLQLKLDNLMALATKRKTKLMDNSAYLQFMWKADVVESWI 1130
+ L+ + + + + + + + ++A R+ KL ++ QF D ESWI
Sbjct: 66 ADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWI 125
Query: 1131 ADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTLKDQLVASNHDQTP 1190
+K+ V SE+YGRDL+ VQ L K + +A L A E IQ + +L N
Sbjct: 126 KEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPA-IQGVLDTGKKLSDDNTIGKE 184
Query: 1191 AIVKRHGDVIARWQKLLGDSNARKQRL 1217
I +R + W++L + AR QRL
Sbjct: 185 EIQQRLAQFVDHWKELKQLAAARGQRL 211
Score = 121 bits (305), Expect = 3e-31
Identities = 71/210 (33%), Positives = 115/210 (54%), Gaps = 3/210 (1%)
Query: 363 DFYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLA 422
+F + + W+S EA L +E+ +V L+KKH+ + I+AHE+++ L + A
Sbjct: 7 NFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQA 66
Query: 423 DQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIA 482
D L+ + + + DKR+ + R++ +K +R++L ES L QF RD D+ E+WI
Sbjct: 67 DSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIK 126
Query: 483 EKLQLATEESY-KDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEE 541
EK L + E Y +D +Q+ +KH+ EAELAA+ IQ VL G+ L D +E
Sbjct: 127 EKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSD--DNTIGKE 184
Query: 542 AVQARLASIADQWEFLTQKTTEKSLKLKEA 571
+Q RLA D W+ L Q + +L+E+
Sbjct: 185 EIQQRLAQFVDHWKELKQLAAARGQRLEES 214
Score = 120 bits (302), Expect = 8e-31
Identities = 58/212 (27%), Positives = 112/212 (52%), Gaps = 3/212 (1%)
Query: 691 LQQFSRDADEMENWIAEK-LQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLA 749
Q F+ + + W++E LA+E+ KD A++ + +KHQ EA+++A+ DR++ + +
Sbjct: 5 QQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNS 64
Query: 750 MGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLD 809
+L+ V+ + +I +++ + + KL E+++ + + D +
Sbjct: 65 QADSLMTSSAF--DTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEE 122
Query: 810 FWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDSGQFD 869
W+ E + L++SED G+DL VQNL KKH+ +EA++ AH+ I+ + L D
Sbjct: 123 SWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIG 182
Query: 870 ASSIQEKRQSINERYERIKNLAAHRQARLNEA 901
IQ++ + ++ +K LAA R RL E+
Sbjct: 183 KEEIQQRLAQFVDHWKELKQLAAARGQRLEES 214
Score = 118 bits (297), Expect = 4e-30
Identities = 70/207 (33%), Positives = 113/207 (54%), Gaps = 3/207 (1%)
Query: 590 KDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQL 649
+ + W+S EA L +E+ +V L+KKH+ + I+AHE+++ L + AD L
Sbjct: 10 TGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSL 69
Query: 650 IAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIAEKL 709
+ + + + DKR+ + R++ +K +R++L ES L QF RD D+ E+WI EK
Sbjct: 70 MTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKK 129
Query: 710 QLATEESY-KDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEEAVQ 768
L + E Y +D +Q+ +KH+ EAELAA+ IQ VL G+ L D +E +Q
Sbjct: 130 LLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSD--DNTIGKEEIQ 187
Query: 769 ARLASIADQWEFLTQKTTEKSLKLKEA 795
RLA D W+ L Q + +L+E+
Sbjct: 188 QRLAQFVDHWKELKQLAAARGQRLEES 214
Score = 78.4 bits (193), Expect = 3e-16
Identities = 41/211 (19%), Positives = 83/211 (39%), Gaps = 46/211 (21%)
Query: 300 RFQYFKRDADELESWIYEK-LQAASDESYKETTNLQAKIQKHQAFEAEVAAHSNAIVVLD 358
+ Q F + + W+ E AS++ K+ ++ ++KHQ EA+++AH + + L+
Sbjct: 4 KQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLN 63
Query: 359 NTGND---------------------------------------------FYRDCEQAEN 373
+ + F+RD + E+
Sbjct: 64 SQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEES 123
Query: 374 WMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHYAA 433
W+ ++ +++E+ V+ L KKH+ + + AHE I + +L +
Sbjct: 124 WIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGK 183
Query: 434 KPIDDKRKQVLDRWRLLKEALIEKRSRLGES 464
+ I + Q +D W+ LK+ + RL ES
Sbjct: 184 EEIQQRLAQFVDHWKELKQLAAARGQRLEES 214
Score = 73.4 bits (180), Expect = 2e-14
Identities = 39/253 (15%), Positives = 93/253 (36%), Gaps = 45/253 (17%)
Query: 1118 QFMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTL 1177
F + W+++ E + SE+YG+DL++V LL K + +A + A E ++++ +
Sbjct: 7 NFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDR-LKDLNSQ 65
Query: 1178 KDQLVASNHDQTPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQIEDLYLTFAKK 1237
D L+ S+ T + + + R+Q++ + AR+ +L + D+
Sbjct: 66 ADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDM------- 118
Query: 1238 ASSFNKPQPLSRDMEMSLQDGRSYLEIPMPGNNVFSASSFNSWFENAEEDLTDPVRCNSI 1297
SW + + ++ +
Sbjct: 119 -------------------------------------DDEESWIKEKKLLVSSEDYGRDL 141
Query: 1298 EEIRALREAHAQFQASLSSAQADFEALAALDQQIKSFNVGPNPYTWFTMEALEDTWRNLQ 1357
++ LR+ H + +A L++ + + + +++ N + D W+ L+
Sbjct: 142 TGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELK 201
Query: 1358 KIIKERDIELAKE 1370
++ R L +
Sbjct: 202 QLAAARGQRLEES 214
Score = 63.8 bits (155), Expect = 3e-11
Identities = 37/95 (38%), Positives = 56/95 (58%)
Query: 25 ASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTSVQNLQKKHALLEADVASHLDRIES 84
A++QQ FN I+D + WLSE+E L SEDYGKDL SV NL KKH LLEAD+++H DR++
Sbjct: 2 ANKQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKD 61
Query: 85 VKAATEQFLEHYGKDEDSSEALLKKHEALVSDLEA 119
+ + + + D + + +++
Sbjct: 62 LNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKS 96
Score = 62.6 bits (152), Expect = 7e-11
Identities = 34/109 (31%), Positives = 59/109 (54%)
Query: 1 MEQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTS 60
E I ++ + + + KL E+ + F R ++D E W+ E + + SEDYG+DLT
Sbjct: 84 RETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTG 143
Query: 61 VQNLQKKHALLEADVASHLDRIESVKAATEQFLEHYGKDEDSSEALLKK 109
VQNL+KKH LEA++A+H I+ V ++ + ++ + L +
Sbjct: 144 VQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQ 192
Score = 61.5 bits (149), Expect = 2e-10
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 5/158 (3%)
Query: 233 EQVLNRYADFKSEARSKREKLEDITVKEVKILET----ANDIQERREQVLNRYADFKSEA 288
+L ++ +++ + ++L+D+ + ++ + + ++++RE + R+ KS A
Sbjct: 39 NNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMA 98
Query: 289 RSKREKLEDSRRFQYFKRDADELESWIYEKLQAASDESY-KETTNLQAKIQKHQAFEAEV 347
++R KL +S R F RD D+ ESWI EK S E Y ++ T +Q +KH+ EAE+
Sbjct: 99 AARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAEL 158
Query: 348 AAHSNAIVVLDNTGNDFYRDCEQAENWMSAREAFLNAE 385
AAH AI + +TG D + + R A
Sbjct: 159 AAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDH 196
Score = 54.2 bits (130), Expect = 6e-08
Identities = 28/214 (13%), Positives = 69/214 (32%), Gaps = 13/214 (6%)
Query: 1273 SASSFNSWFENAEEDLTDPVRCNSIEEIRALREAHAQFQASLSSAQADFEALAALDQQIK 1332
F+ W E L + + L + H +A +S+ + + L + +
Sbjct: 11 GIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLM 70
Query: 1333 SFNVGPNPYTWFTMEALEDTWRNLQKIIKERDIELAKEATRQDENDALRKEFAKHANAFH 1392
+ + E + ++ ++ + R +L +F + +
Sbjct: 71 TSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKL--------NESHRLHQFFRDMDDEE 122
Query: 1393 QWLTETRTSMMEG-----TGSLEQQLEAIKRKAAEVRSRRSDLKKIEDLGAILEEHLILD 1447
W+ E + + ++ + KR AE+ + ++ + D G L + +
Sbjct: 123 SWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIG 182
Query: 1448 NRYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQ 1481
+ W +L QL LE+ ++
Sbjct: 183 KEEIQQRLAQFVDHWKELKQLAAARGQRLEESLE 216
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome;
2.95A {Homo sapiens}
Length = 450
Score = 170 bits (431), Expect = 2e-45
Identities = 44/292 (15%), Positives = 108/292 (36%), Gaps = 18/292 (6%)
Query: 805 VKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLID 864
+ W+ + + + G DLASV+ I H+ + I + ++ +
Sbjct: 11 TSECLGWMRQQRAEMDMVAWGVDLASVEQHINSHRGIHNSIGDYRWQLDKIKADLR---- 66
Query: 865 SGQFDASSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQFFRDIADEESWIKEKKLL 924
+ + E YE + + R L + L + + E WI + +
Sbjct: 67 --------EKSAIYQLEEEYENLLKASFERMDHLRQ---LQNIIQATSREIMWINDCEEE 115
Query: 925 VGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMDVSNLGVPEIEQRLK 984
D+ T + ++ ++L + + +++ ++L+ + +IE +
Sbjct: 116 ELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLNQHPASDKIEAYMD 175
Query: 985 LLNQAWSELKQLAANRGQKLDESLTYQHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQ 1044
L WS + Q+ L E+ Y F + + EA++ Q + + D +Q
Sbjct: 176 TLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDSIRKKYPCDKNMPLQ 235
Query: 1045 GL---LKKHDAFETDFSVHRDRCADICSAGNKLIEAKNHHADSITQRCQQLQ 1093
L +K+ + ++ + ++ + K+++ K + D + + L+
Sbjct: 236 HLLEQIKELEKEREKILEYKRQVQNLVNKSKKIVQLKPRNPDYRSNKPIILR 287
Score = 155 bits (392), Expect = 2e-40
Identities = 37/301 (12%), Positives = 105/301 (34%), Gaps = 17/301 (5%)
Query: 906 QFFRDIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETG 965
++ W+++++ + +G DL V+ H+ + + ++ + ++
Sbjct: 6 FTKHVTSECLGWMRQQRAEMDMVAWGVDLASVEQHINSHRGIHNSIGDYRWQLDKIKADL 65
Query: 966 EKLMDVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESLTYQHFLAKVEEEEAWIS 1025
+ + + L + + L + + R L + Q+ + E WI+
Sbjct: 66 RE------------KSAIYQLEEEYENLLKASFERMDHLRQ---LQNIIQATSREIMWIN 110
Query: 1026 EKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEAKNHHADSI 1085
+ ++ + D+ D + + + V + ++L+ ++ +D I
Sbjct: 111 DCEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLNQHPASDKI 170
Query: 1086 TQRCQQLQLKLDNLMALATKRKTKLMDNSAYLQFMWKADVVESWIADKETHVKSEEYGRD 1145
LQ + ++ + L +N+AY QF +A E+++ + ++ +
Sbjct: 171 EAYMDTLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDSIRKKYPCDK 230
Query: 1146 LSTVQTLLTKQETFDAGLHAFEHEG--IQNITTLKDQLVASNHDQTPAIVKRHGDVIARW 1203
+Q LL + + + +QN+ ++V + + A
Sbjct: 231 NMPLQHLLEQIKELEKEREKILEYKRQVQNLVNKSKKIVQLKPRNPDYRSNKPIILRALC 290
Query: 1204 Q 1204
Sbjct: 291 D 291
Score = 139 bits (351), Expect = 5e-35
Identities = 56/497 (11%), Positives = 158/497 (31%), Gaps = 61/497 (12%)
Query: 692 QQFSRDADEMENWIAEKL-QLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAM 750
+ E W+ ++ ++ D A+++ H+ + ++ + A
Sbjct: 5 EFTKHVTSECLGWMRQQRAEMDMVAWGVDLASVEQHINSHRGIHNSIGDYRWQLDKIKA- 63
Query: 751 GQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLDF 810
+ ++ + + +++E L + + E+ L++ + I A
Sbjct: 64 -------------DLREKSAIYQLEEEYENLLKASFERMDHLRQL---QNIIQATSREIM 107
Query: 811 WLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDSGQFDA 870
W+ + E D ++ + + + ++ + + + ++D L+ + +
Sbjct: 108 WINDCEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLNQHPAS 167
Query: 871 SSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQFFRDIADEESWIKEKKLLVGSDDY 930
I+ ++ ++ I + L E QFF + E+++K + +
Sbjct: 168 DKIEAYMDTLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDSIRKKYP 227
Query: 931 GRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMDVSNLGVPEIEQRLKLLNQAW 990
+Q+L ++ K LE + I + + L++ S V + +
Sbjct: 228 CDKNMPLQHLLEQIKELEK----EREKILEYKRQVQNLVNKSKKIVQLKPRNPDYRSNKP 283
Query: 991 SELKQLAANRGQKLDESLTYQHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKH 1050
L+ L + + + L E W V G V +
Sbjct: 284 IILRALCDYKQDQKIVHKGDECILKDNNERSKW--------YVTGPGGVDMLVPSVG--- 332
Query: 1051 DAFETDFSVHRDRCADICSAGNKLIEAKNHHADSITQRCQQLQLKLDNLMALATKRKTKL 1110
+I N A ++ + ++ + ++AL + +
Sbjct: 333 ----------------------LIIPPPNPLAVDLSCK---IEQYYEAILALWNQLYINM 367
Query: 1111 MDNSAYLQFMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEG 1170
++ M + + + K ++ E+Y + ++ ++ + F E G
Sbjct: 368 KSLVSWHYCMIDIEKIRAMTIAKLKTMRQEDYMKTIADLE---LHYQEFIRNSQGSEMFG 424
Query: 1171 IQNITTLKDQLVASNHD 1187
+ ++ Q +
Sbjct: 425 DDDKRKIQSQFTDAQKH 441
Score = 124 bits (312), Expect = 6e-30
Identities = 49/490 (10%), Positives = 139/490 (28%), Gaps = 75/490 (15%)
Query: 468 QQFSRDADEMENWIAEKL-QLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAM 526
+ E W+ ++ ++ D A+++ H+ + ++ + A
Sbjct: 5 EFTKHVTSECLGWMRQQRAEMDMVAWGVDLASVEQHINSHRGIHNSIGDYRWQLDKIKA- 63
Query: 527 GQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLPY 586
+ ++ + + +++E L + + E+ L++
Sbjct: 64 -------------DLREKSAIYQLEEEYENLLKASFERMDHLRQLQNII----------- 99
Query: 587 FSKKDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLA 646
+ + W++ E + K N+ + + E+++ L+ +
Sbjct: 100 ---QATSREIMWINDCEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQES 156
Query: 647 DQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIA 706
DQL+ H A+ I+ + +W + + L E+ QF +A E ++
Sbjct: 157 DQLVLNQHPASDKIEAYMDTLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLK 216
Query: 707 EKLQ-LATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEE 765
+ + +Q ++ + E E
Sbjct: 217 GLQDSIRKKYPCDKNMPLQHLLEQIKELEKEREK------------------------IL 252
Query: 766 AVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLDFWLGEVESLLTSEDSG 825
+ ++ ++ ++ + + Q + K + + + + +++
Sbjct: 253 EYKRQVQNLVNKSKKIVQLKPRNPDYRSNKPIILRALCDYKQDQKIVHKGDECILKDNNE 312
Query: 826 KDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDSGQFDASSIQEKRQSINERYE 885
+ V LV + + I + YE
Sbjct: 313 RSKWYVTGPGGVDMLVPSVGLIIPPPNPL------------------AVDLSCKIEQYYE 354
Query: 886 RIKNLAAHRQARLNEANTLHQFFRDIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHK 945
I L + + H DI + K + +DY + + +L+ ++
Sbjct: 355 AILALWNQLYINMKSLVSWHYCMIDIEKIRAMTIAKLKTMRQEDYMKTI---ADLELHYQ 411
Query: 946 RLEAELASHQ 955
+
Sbjct: 412 EFIRNSQGSE 421
Score = 111 bits (279), Expect = 1e-25
Identities = 26/269 (9%), Positives = 85/269 (31%), Gaps = 35/269 (13%)
Query: 302 QYFKRDADELESWIYEKLQAASDESY-KETTNLQAKIQKHQAFEAEVAAHSNAIVVLDNT 360
++ K E W+ ++ ++ + +++ I H+ + + + +
Sbjct: 5 EFTKHVTSECLGWMRQQRAEMDMVAWGVDLASVEQHINSHRGIHNSIGDYRWQLDKIKAD 64
Query: 361 GN------------------------------DFYRDCEQAENWMSAREAFLNAEEVDSK 390
+ + + W++ E + K
Sbjct: 65 LREKSAIYQLEEEYENLLKASFERMDHLRQLQNIIQATSREIMWINDCEEEELLYDWSDK 124
Query: 391 TDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHYAAKPIDDKRKQVLDRWRLL 450
N+ + + E+++ L+ +DQL+ H A+ I+ + +W +
Sbjct: 125 NTNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLNQHPASDKIEAYMDTLQTQWSWI 184
Query: 451 KEALIEKRSRLGESQTLQQFSRDADEMENWIAEKLQ-LATEESYKDPANIQS---KHQKH 506
+ L E+ QF +A E ++ + + +Q + ++
Sbjct: 185 LQITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDSIRKKYPCDKNMPLQHLLEQIKEL 244
Query: 507 QAFEAELAANADRIQSVLAMGQNLIDKRQ 535
+ ++ ++Q+++ + ++ +
Sbjct: 245 EKEREKILEYKRQVQNLVNKSKKIVQLKP 273
Score = 94.8 bits (235), Expect = 3e-20
Identities = 52/428 (12%), Positives = 117/428 (27%), Gaps = 66/428 (15%)
Query: 1011 QHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSA 1070
+ E W+ +++ + + +G +A+V+ + H +R + I +
Sbjct: 5 EFTKHVTSECLGWMRQQRAEMDMVAWGVDLASVEQHINSHRGIHNSIGDYRWQLDKIKAD 64
Query: 1071 GNKLIEAKNHHADSITQRCQQLQLKLDNLMALATKRKTKLMDNSAYLQFMWKADVVESWI 1130
+ QL+ + +NL+ + +R L + WI
Sbjct: 65 LREK------------SAIYQLEEEYENLLKASFERMDHLRQ---LQNIIQATSREIMWI 109
Query: 1131 ADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTLKDQLVASNHDQTP 1190
D E ++ + + + L E E + + DQLV + H +
Sbjct: 110 NDCEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKE-LNKLKQESDQLVLNQHPASD 168
Query: 1191 AIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQIEDLYLTFAKKASSFNKPQPLSRD 1250
I + +W +L + L F+ E+
Sbjct: 169 KIEAYMDTLQTQWSWILQITKCIDVHLKENAAYFQFFEE--------------------- 207
Query: 1251 MEMSLQDGRSYLEIPMPGNNVFSASSFNSWFENAEEDLTDPVRCNSIEEIRALREAHAQF 1310
A S ++ + ++ + C+ ++ L E +
Sbjct: 208 -----------------------AQSTEAYLKGLQDSIRKKYPCDKNMPLQHLLEQIKEL 244
Query: 1311 QASLSSAQADFEALAALDQQIKSF------NVGPNPYTWFTMEALEDTWRNLQKIIKERD 1364
+ + L + K N + AL D ++ + + K +
Sbjct: 245 EKEREKILEYKRQVQNLVNKSKKIVQLKPRNPDYRSNKPIILRALCDYKQDQKIVHKGDE 304
Query: 1365 IELAKEATRQDENDALRKEFAKHANAFHQWLTETRTSMMEGTGSLEQQLEAIKRKAAEVR 1424
L R + + ++ + +EQ EAI ++
Sbjct: 305 CILKDNNERSKWYVTGPGGVDMLVPSVGLIIPPPNPLAVDLSCKIEQYYEAILALWNQLY 364
Query: 1425 SRRSDLKK 1432
L
Sbjct: 365 INMKSLVS 372
Score = 84.4 bits (208), Expect = 7e-17
Identities = 38/315 (12%), Positives = 82/315 (26%), Gaps = 70/315 (22%)
Query: 1 MEQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTS 60
M+ + W + T+ L+E + F + E +L ++ + +
Sbjct: 174 MDTLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDSIRKKYPCDKNMP 233
Query: 61 VQNLQKKHALLEADVASHLDRIESVKAATEQFLEHYGKDEDSSEALLKKHEALVSDLEAF 120
+Q+L ++ K+ E + +
Sbjct: 234 LQHLLEQI---------------------------------------KELEKEREKILEY 254
Query: 121 GNTILGLREQAQSCRQ--QETPVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSN 178
+ L +++ Q P + AL DY + + + K D L ++N
Sbjct: 255 KRQVQNLVNKSKKIVQLKPRNPDYRSNKPIILRALCDYKQD---QKIVHKGDECILKDNN 311
Query: 179 NKDWWKVEVND-RQGFVPAAYVKKMEAGLTASQQNLADVKEVKILETANDIQERREQVLN 237
+ W V VP+ + I + ++
Sbjct: 312 ERSKWYVTGPGGVDMLVPSVG--------------------LIIPPPNPLAVDLSCKIEQ 351
Query: 238 RYADFKSEARSKREKLEDITVKEVKILETANDIQERREQVLNRYADFKSEARSKREKLED 297
Y + ++ V + I+ L + LE
Sbjct: 352 YYEAILALWNQLYINMKS-LVSWHYCMIDIEKIRAMTIAKLKTMRQ--EDYMKTIADLEL 408
Query: 298 SRRFQYFKRDADELE 312
+Q F R++ E
Sbjct: 409 --HYQEFIRNSQGSE 421
Score = 70.1 bits (171), Expect = 2e-12
Identities = 51/502 (10%), Positives = 141/502 (28%), Gaps = 86/502 (17%)
Query: 25 ASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTSVQNLQKKHALLEADVASHLDRIES 84
+ + + W+ + ++ +G DL SV+ H + + + +++
Sbjct: 1 SGWDEFTKHVTSECLGWMRQQRAEMDMVAWGVDLASVEQHINSHRGIHNSIGDYRWQLDK 60
Query: 85 VKAATEQFLEHYGKDEDSSEALLKKHEALVSDLEAFGNTILGLREQAQSCRQQETPVIDV 144
+KA + + E+ E LLK + L L+ Q+ ++ +
Sbjct: 61 IKAD-LREKSAIYQLEEEYENLLKASFERMDHLRQ-------LQNIIQATSREIMWI--- 109
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEA 204
+ E+ SD T + + +
Sbjct: 110 ------------NDCEEEELLYDWSDKNTNIAQKQE-----------------AFSIRMS 140
Query: 205 GLTASQQNLADVKEVKILETANDIQERREQVLNRYADFKSEARSKREKLEDITVKEVKIL 264
L ++ L + + ++ + + ++ + +++ + IT L
Sbjct: 141 QLEVKEKELNKL-----KQESDQLVLNQHPASDKIEAYMDTLQTQWSWILQITKCIDVHL 195
Query: 265 ETANDIQERREQVLNRYADFKSEARSKREKLEDSRRFQYFKRDADELESWIYEKLQAASD 324
+ + E+ + + L+DS R +Y L+
Sbjct: 196 KENAAYFQFFEEA--------QSTEAYLKGLQDSIRKKYPCDKNMPLQH----------- 236
Query: 325 ESYKETTNLQAKIQKHQAFEAEVAAHSNAIVVLDNTGNDFYRDCEQAENWMSAREAFLNA 384
L +I++ + ++ + + L N + + ++ S +
Sbjct: 237 --------LLEQIKELEKEREKILEYKRQVQNLVNKSKKIVQLKPRNPDYRSNKP----- 283
Query: 385 EEVDSKTD--NVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHYAAKPIDDKR-- 440
+ + D + ++ K ++ N K ++ P +
Sbjct: 284 IILRALCDYKQDQKIVHKGDECILKDNNERSKWYVTGPGGVDMLVPSVGLIIPPPNPLAV 343
Query: 441 ---KQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIAEKLQLATEESYKDPA 497
++ + + + + + D +++ KL+ +E Y
Sbjct: 344 DLSCKIEQYYEAILALWNQLYINMKSLVSWHYCMIDIEKIRAMTIAKLKTMRQEDYM--K 401
Query: 498 NIQSKHQKHQAFEAELAANADR 519
I +Q F +
Sbjct: 402 TIADLELHYQEFIRNSQGSEMF 423
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle,
spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Length = 224
Score = 161 bits (409), Expect = 5e-45
Identities = 52/230 (22%), Positives = 96/230 (41%), Gaps = 9/230 (3%)
Query: 777 QWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIK 836
Q K++ L E + V+DL W+ E++ L + G DL SV++ ++
Sbjct: 4 QIRKPLLKSSLLDQNLTEEEV---NMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLE 60
Query: 837 KHQLVEADIQAHDDRIKDMNGQADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQA 896
H+ V I+ + +K+ + S +K + +Y ++ N + +++
Sbjct: 61 NHKNVHRAIEEFESSLKEAKISEIQMTAP---LKLSYTDKLHRLESQYAKLLNTSRNQER 117
Query: 897 RLNEANTLHQFFRDIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQP 956
L+ LH F +E W+ EK+ + D+ + V K H L EL +
Sbjct: 118 HLDT---LHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQKEE 174
Query: 957 AIQNVQETGEKLMDVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDE 1006
+I+ VQE E+L+ ++ IE + WS + QL Q + E
Sbjct: 175 SIKAVQEIAEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQHIQE 224
Score = 137 bits (346), Expect = 1e-36
Identities = 28/230 (12%), Positives = 86/230 (37%), Gaps = 6/230 (2%)
Query: 883 RYERIKNLAAHRQARLNEANTLHQFFRDIADEESWIKEKKLLVGSDDYGRDLTGVQNLKK 942
+ +I+ + + D +W+ E ++ + ++G DL V++ +
Sbjct: 1 KLMQIRKPLLKSSLLDQNLTEEEVNMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLE 60
Query: 943 KHKRLEAELASHQPAIQNVQETGEKLMDVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQ 1002
HK + + + +++ + + ++ + +L L +++L + N+ +
Sbjct: 61 NHKNVHRAIEEFESSLKEAKISEIQM---TAPLKLSYTDKLHRLESQYAKLLNTSRNQER 117
Query: 1003 KLDESLTYQHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRD 1062
LD +F+ + E W++EK++ D+ + ++V H + +
Sbjct: 118 HLDT---LHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQKEE 174
Query: 1063 RCADICSAGNKLIEAKNHHADSITQRCQQLQLKLDNLMALATKRKTKLMD 1112
+ +L+ + +I +Q + ++ L + + +
Sbjct: 175 SIKAVQEIAEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQHIQE 224
Score = 108 bits (271), Expect = 1e-26
Identities = 33/228 (14%), Positives = 79/228 (34%), Gaps = 7/228 (3%)
Query: 990 WSELKQLAANRGQKLDESLTYQHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKK 1049
++++ + + V++ W+ E Q L ++G + +V+ L+
Sbjct: 2 LMQIRKPLLKSSLLDQNLTEEEVNMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLEN 61
Query: 1050 HDAFETDFSVHRDRCADICSAGNKLIEAKNHHADSITQRCQQLQLKLDNLMALATKRKTK 1109
H + + ++ S T + +L+ + L+ + ++
Sbjct: 62 HKNVHRAIEEFESSLKEAKISEIQMTAPL---KLSYTDKLHRLESQYAKLLNTSRNQERH 118
Query: 1110 LMDNSAYLQFMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHE 1169
L F+ +A W+ +KE + ++ S+V + L E E
Sbjct: 119 L---DTLHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQKE-E 174
Query: 1170 GIQNITTLKDQLVASNHDQTPAIVKRHGDVIARWQKLLGDSNARKQRL 1217
I+ + + +QL+ NH I + +W +L +Q +
Sbjct: 175 SIKAVQEIAEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQHI 222
Score = 106 bits (267), Expect = 5e-26
Identities = 31/232 (13%), Positives = 81/232 (34%), Gaps = 9/232 (3%)
Query: 670 RWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIAEKL-QLATEESYKDPANIQSKHQ 728
+ +++ L++ + + ++ NW+ E QL E D +++S +
Sbjct: 1 KLMQIRKPLLKSSLLDQNLTEEEVNMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLE 60
Query: 729 KHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEK 788
H+ + ++ + + + +L + Q+ L + +
Sbjct: 61 NHKNVHRAIEEFESSLKEAKISEIQMTAP-----LKLSYTDKLHRLESQYAKLLNTSRNQ 115
Query: 789 SLKLKEANKQRTYIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAH 848
L ++ + WL E E + D + +SV H + +++
Sbjct: 116 ERHLDTL---HNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQK 172
Query: 849 DDRIKDMNGQADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLNE 900
++ IK + A+ L+ +I+ R ++ ++ I L + + E
Sbjct: 173 EESIKAVQEIAEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQHIQE 224
Score = 103 bits (258), Expect = 8e-25
Identities = 42/243 (17%), Positives = 87/243 (35%), Gaps = 23/243 (9%)
Query: 553 QWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLPYFSKKDCEQAENWMSAREAFLNAEEVD 612
Q K++ L E K + NW+ + L+ E
Sbjct: 4 QIRKPLLKSSLLDQNLTEEEVNM--------------KFVQDLLNWVDEMQVQLDRTEWG 49
Query: 613 SKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHYAAKPIDDKRKQVLDRWR 672
S +VE+ ++ H++ +AI E + + Q+ A + DK ++ ++
Sbjct: 50 SDLPSVESHLENHKNVHRAIEEFESSLKEAKISEIQMTAPLKLS---YTDKLHRLESQYA 106
Query: 673 LLKEALIEKRSRLGESQTLQQFSRDADEMENWIAEKLQLATEESY-KDPANIQSKHQKHQ 731
L + L TL F A W+ EK + + + +++ K H
Sbjct: 107 KLLNTSRNQERHL---DTLHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHA 163
Query: 732 AFEAELAANADRIQSVLAMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLK 791
EL + I++V + + L+ + + ++A A++ QW ++ Q
Sbjct: 164 ELMRELEQKEESIKAVQEIAEQLLLENH--PARLTIEAYRAAMQTQWSWILQLCQCVEQH 221
Query: 792 LKE 794
++E
Sbjct: 222 IQE 224
Score = 102 bits (256), Expect = 2e-24
Identities = 37/210 (17%), Positives = 81/210 (38%), Gaps = 9/210 (4%)
Query: 362 NDFYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTL 421
+ + NW+ + L+ E S +VE+ ++ H++ +AI E + +
Sbjct: 23 EVNMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLENHKNVHRAIEEFESSLKEAKIS 82
Query: 422 ADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWI 481
Q+ A + DK ++ ++ L + L TL F A W+
Sbjct: 83 EIQMTAPLKLS---YTDKLHRLESQYAKLLNTSRNQERHL---DTLHNFVTRATNELIWL 136
Query: 482 AEKLQLATEESY-KDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSE 540
EK + + + +++ K H EL + I++V + + L+ + +
Sbjct: 137 NEKEESEVAYDWSERNSSVARKKSYHAELMRELEQKEESIKAVQEIAEQLLLENH--PAR 194
Query: 541 EAVQARLASIADQWEFLTQKTTEKSLKLKE 570
++A A++ QW ++ Q ++E
Sbjct: 195 LTIEAYRAAMQTQWSWILQLCQCVEQHIQE 224
Score = 97.4 bits (242), Expect = 1e-22
Identities = 33/243 (13%), Positives = 81/243 (33%), Gaps = 20/243 (8%)
Query: 446 RWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIAEKL-QLATEESYKDPANIQSKHQ 504
+ +++ L++ + + ++ NW+ E QL E D +++S +
Sbjct: 1 KLMQIRKPLLKSSLLDQNLTEEEVNMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLE 60
Query: 505 KHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEK 564
H+ + ++ + + + +L + Q+ L + +
Sbjct: 61 NHKNVHRAIEEFESSLKEAKISEIQMTAP-----LKLSYTDKLHRLESQYAKLLNTSRNQ 115
Query: 565 SLKLKEANKQRTYIAAVKDLPYFSKKDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKK 624
L + W++ +E A + + +V
Sbjct: 116 ERHLDTLHNF--------------VTRATNELIWLNEKEESEVAYDWSERNSSVARKKSY 161
Query: 625 HEDFDKAINAHEEKIGALQTLADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSR 684
H + + + EE I A+Q +A+QL+ +H A I+ R + +W + +
Sbjct: 162 HAELMRELEQKEESIKAVQEIAEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQH 221
Query: 685 LGE 687
+ E
Sbjct: 222 IQE 224
Score = 77.7 bits (191), Expect = 6e-16
Identities = 24/224 (10%), Positives = 67/224 (29%), Gaps = 40/224 (17%)
Query: 280 RYADFKSEARSKREKLEDSRRFQYFKRDADELESWIYEKLQAASDESYKET-TNLQAKIQ 338
+ + ++ + + +L +W+ E + ++++ ++
Sbjct: 1 KLMQIRKPLLKSSLLDQNLTEEEVNMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLE 60
Query: 339 KHQAFEAEVAAHSNAIVVLDNTGN------------------------------------ 362
H+ + +++ +
Sbjct: 61 NHKNVHRAIEEFESSLKEAKISEIQMTAPLKLSYTDKLHRLESQYAKLLNTSRNQERHLD 120
Query: 363 ---DFYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQ 419
+F W++ +E A + + +V H + + + EE I A+Q
Sbjct: 121 TLHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQKEESIKAVQ 180
Query: 420 TLADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGE 463
+A+QL+ +H A I+ R + +W + + + E
Sbjct: 181 EIAEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQHIQE 224
Score = 62.3 bits (151), Expect = 1e-10
Identities = 19/132 (14%), Positives = 47/132 (35%), Gaps = 1/132 (0%)
Query: 8 WESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTSVQNLQKK 67
+ K Q ++++ + ++D+ W+ E++ QL ++G DL SV++ +
Sbjct: 2 LMQIRKPLLKSSLLDQNLTEEEVNMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLEN 61
Query: 68 HALLEADVASHLDRIESVKAATEQFLEHY-GKDEDSSEALLKKHEALVSDLEAFGNTILG 126
H + + ++ K + Q D L ++ L++ +
Sbjct: 62 HKNVHRAIEEFESSLKEAKISEIQMTAPLKLSYTDKLHRLESQYAKLLNTSRNQERHLDT 121
Query: 127 LREQAQSCRQQE 138
L +
Sbjct: 122 LHNFVTRATNEL 133
Score = 55.4 bits (133), Expect = 2e-08
Identities = 19/136 (13%), Positives = 49/136 (36%), Gaps = 4/136 (2%)
Query: 1095 KLDNLMALATKRKTKLMDNSAYLQFMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLT 1154
KL + K + + M + +W+ + + + E+G DL +V++ L
Sbjct: 1 KLMQIRKPLLKSSLLDQNLTEEEVNMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLE 60
Query: 1155 KQETFDAGLHAFEHEGIQNITTLKDQLVASNHDQTPAIVKRHGDVIARWQKLLGDSNARK 1214
+ + FE ++ K + + + + +++ KLL S ++
Sbjct: 61 NHKNVHRAIEEFE----SSLKEAKISEIQMTAPLKLSYTDKLHRLESQYAKLLNTSRNQE 116
Query: 1215 QRLLRMQEQFRQIEDL 1230
+ L + + +
Sbjct: 117 RHLDTLHNFVTRATNE 132
Score = 53.8 bits (129), Expect = 8e-08
Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 5/102 (4%)
Query: 1 MEQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTS 60
+ ++ + L + + L F + +WL+E E ++ D+ + +S
Sbjct: 98 LHRLESQYAKLLNTSRNQERHLDTL---HNFVTRATNELIWLNEKEESEVAYDWSERNSS 154
Query: 61 VQNLQKKHALLEADVASHLDRIESVKAATEQFLE--HYGKDE 100
V + HA L ++ + I++V+ EQ L H +
Sbjct: 155 VARKKSYHAELMRELEQKEESIKAVQEIAEQLLLENHPARLT 196
Score = 34.6 bits (79), Expect = 0.18
Identities = 26/211 (12%), Positives = 63/211 (29%), Gaps = 19/211 (9%)
Query: 1273 SASSFNSWFENAEEDLTDPVRCNSIEEIRALREAHAQFQASLSSAQADFEALAALDQQIK 1332
+W + + L + + + + E H ++ ++ + + Q
Sbjct: 28 FVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLENHKNVHRAIEEFESSLKEAKISEIQ-- 85
Query: 1333 SFNVGPNPYTWFTMEALEDTWRNLQKIIKERDIELAKEATRQDENDALRKEFAKHANAFH 1392
T L ++ + L ++ D L F A
Sbjct: 86 -----------MTAPLKLSYTDKLHRLESQYAKLLNTSRNQERHLDTLHN-FVTRATNEL 133
Query: 1393 QWLTETRTSMM-----EGTGSLEQQLEAIKRKAAEVRSRRSDLKKIEDLGAILEEHLILD 1447
WL E S + E S+ ++ E+ + +K ++++ L
Sbjct: 134 IWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQKEESIKAVQEIAEQLLLENHPA 193
Query: 1448 NRYTEHSTVGLAQQWDQLDQLGMRMQHNLEQ 1478
E + QW + QL ++ ++++
Sbjct: 194 RLTIEAYRAAMQTQWSWILQLCQCVEQHIQE 224
Score = 32.3 bits (73), Expect = 1.1
Identities = 16/164 (9%), Positives = 43/164 (26%), Gaps = 46/164 (28%)
Query: 223 ETANDIQERREQVLNRYADFKSEARSKREKLEDITVKEVKILETANDIQERREQVLNRYA 282
++ ++ ++YA + +R++ L+ +
Sbjct: 89 PLKLSYTDKLHRLESQYAKLLNTSRNQERHLDTL-------------------------- 122
Query: 283 DFKSEARSKREKLEDSRRFQYFKRDADELESWIYEKLQAASDESY-KETTNLQAKIQKHQ 341
F A W+ EK ++ + + +++ K H
Sbjct: 123 -------------------HNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHA 163
Query: 342 AFEAEVAAHSNAIVVLDNTGNDFYRDCEQAENWMSAREAFLNAE 385
E+ +I + + A + A A + +
Sbjct: 164 ELMRELEQKEESIKAVQEIAEQLLLENHPARLTIEAYRAAMQTQ 207
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain
alpha-II spectrin, fordrin alpha chain, sptan1,
SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Length = 218
Score = 157 bits (397), Expect = 2e-43
Identities = 58/218 (26%), Positives = 118/218 (54%)
Query: 890 LAAHRQARLNEANTLHQFFRDIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEA 949
+ H ++++ L +F D D SWI + LV SD+ +D+TG + L ++H+
Sbjct: 1 MGHHHHHHSHDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRT 60
Query: 950 ELASHQPAIQNVQETGEKLMDVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESLT 1009
E+ + Q ++ G++L+ + PEI+Q+L +L+Q ++L++ R LD+ L
Sbjct: 61 EIDARAGTFQAFEQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLE 120
Query: 1010 YQHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICS 1069
Q F E+ E W++ ++ L+ ED GD++ +V+ L+KKH+ F+ +V ++ A + +
Sbjct: 121 LQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQA 180
Query: 1070 AGNKLIEAKNHHADSITQRCQQLQLKLDNLMALATKRK 1107
++LI A ++ I+ R ++ + L A +++
Sbjct: 181 FADQLIAAGHYAKGDISSRRNEVLDRWRRLKAQMIEKR 218
Score = 132 bits (333), Expect = 8e-35
Identities = 40/214 (18%), Positives = 94/214 (43%)
Query: 787 EKSLKLKEANKQRTYIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQ 846
+++ + +++ +DL W+ + L++S++ KD+ + L+++HQ +I
Sbjct: 4 HHHHHSHDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEID 63
Query: 847 AHDDRIKDMNGQADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQ 906
A + L+ G + + I++K +++ ++ R+ L++ L
Sbjct: 64 ARAGTFQAFEQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLELQL 123
Query: 907 FFRDIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGE 966
F RD E+W+ ++ + ++D G L V+ L KKH+ + + + I +Q +
Sbjct: 124 FHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAFAD 183
Query: 967 KLMDVSNLGVPEIEQRLKLLNQAWSELKQLAANR 1000
+L+ + +I R + W LK +
Sbjct: 184 QLIAAGHYAKGDISSRRNEVLDRWRRLKAQMIEK 217
Score = 129 bits (325), Expect = 7e-34
Identities = 87/228 (38%), Positives = 124/228 (54%), Gaps = 14/228 (6%)
Query: 456 EKRSRLGESQTLQQFSRDADEMENWIAEKL-QLATEESYKDPANIQSKHQKHQAFEAELA 514
+S LQ+F D ++ +WI ++++E KD ++ ++HQ E+
Sbjct: 4 HHHHHSHDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEID 63
Query: 515 ANADRIQSVLAMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQ 574
A A Q+ GQ L+ + ++ +L + + L + ++ + L + +
Sbjct: 64 ARAGTFQAFEQFGQQLLAHGH--YASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLEL 121
Query: 575 RTYIAAVKDLPYFSKKDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINA 634
+ + +DCEQAENWM+AREAFLN E+ D+VEALIKKHEDFDKAIN
Sbjct: 122 QLF-----------HRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINV 170
Query: 635 HEEKIGALQTLADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKR 682
EEKI ALQ ADQLIAA HYA I +R +VLDRWR LK +IEKR
Sbjct: 171 QEEKIAALQAFADQLIAAGHYAKGDISSRRNEVLDRWRRLKAQMIEKR 218
Score = 127 bits (320), Expect = 3e-33
Identities = 48/219 (21%), Positives = 95/219 (43%), Gaps = 1/219 (0%)
Query: 996 LAANRGQKLDESLTYQHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFET 1055
+ + +S Q FL+ + +WI+ + L+S ++ + + LL++H T
Sbjct: 1 MGHHHHHHSHDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRT 60
Query: 1056 DFSVHRDRCADICSAGNKLIEAKNHHADSITQRCQQLQLKLDNLMALATKRKTKLMDNSA 1115
+ G +L+ ++ + I Q+ L + +L +R+ L
Sbjct: 61 EIDARAGTFQAFEQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLE 120
Query: 1116 YLQFMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQNIT 1175
F + E+W+A +E + +E+ G L +V+ L+ K E FD ++ E E I +
Sbjct: 121 LQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQE-EKIAALQ 179
Query: 1176 TLKDQLVASNHDQTPAIVKRHGDVIARWQKLLGDSNARK 1214
DQL+A+ H I R +V+ RW++L ++
Sbjct: 180 AFADQLIAAGHYAKGDISSRRNEVLDRWRRLKAQMIEKR 218
Score = 123 bits (310), Expect = 8e-32
Identities = 48/216 (22%), Positives = 98/216 (45%), Gaps = 3/216 (1%)
Query: 680 EKRSRLGESQTLQQFSRDADEMENWIAEKL-QLATEESYKDPANIQSKHQKHQAFEAELA 738
+S LQ+F D ++ +WI ++++E KD ++ ++HQ E+
Sbjct: 4 HHHHHSHDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEID 63
Query: 739 ANADRIQSVLAMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQ 798
A A Q+ GQ L+ + ++ +L + + L + ++ + L + +
Sbjct: 64 ARAGTFQAFEQFGQQLLAHGH--YASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLEL 121
Query: 799 RTYIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQ 858
+ + + + W+ E+ L +ED G L SV+ LIKKH+ + I +++I +
Sbjct: 122 QLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAF 181
Query: 859 ADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHR 894
AD LI +G + I +R + +R+ R+K +
Sbjct: 182 ADQLIAAGHYAKGDISSRRNEVLDRWRRLKAQMIEK 217
Score = 113 bits (283), Expect = 3e-28
Identities = 48/203 (23%), Positives = 96/203 (47%), Gaps = 3/203 (1%)
Query: 363 DFYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLA 422
F D +W++ ++++E+ EAL+++H++ I+A A +
Sbjct: 17 RFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFG 76
Query: 423 DQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIA 482
QL+A HYA+ I K + L++A +++R L + LQ F RD ++ ENW+A
Sbjct: 77 QQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLELQLFHRDCEQAENWMA 136
Query: 483 EK-LQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEE 541
+ L TE+ ++++ +KH+ F+ + ++I ++ A LI ++
Sbjct: 137 AREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAFADQLIAAGHY--AKG 194
Query: 542 AVQARLASIADQWEFLTQKTTEK 564
+ +R + D+W L + EK
Sbjct: 195 DISSRRNEVLDRWRRLKAQMIEK 217
Score = 109 bits (274), Expect = 5e-27
Identities = 47/199 (23%), Positives = 95/199 (47%), Gaps = 3/199 (1%)
Query: 591 DCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLI 650
D +W++ ++++E+ EAL+++H++ I+A A + QL+
Sbjct: 21 DFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLL 80
Query: 651 AADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIAEK-L 709
A HYA+ I K + L++A +++R L + LQ F RD ++ ENW+A +
Sbjct: 81 AHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLELQLFHRDCEQAENWMAAREA 140
Query: 710 QLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEEAVQA 769
L TE+ ++++ +KH+ F+ + ++I ++ A LI ++ + +
Sbjct: 141 FLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAFADQLIAAGHY--AKGDISS 198
Query: 770 RLASIADQWEFLTQKTTEK 788
R + D+W L + EK
Sbjct: 199 RRNEVLDRWRRLKAQMIEK 217
Score = 102 bits (256), Expect = 1e-24
Identities = 87/217 (40%), Positives = 104/217 (47%), Gaps = 46/217 (21%)
Query: 288 ARSKREKLEDSRRFQYFKRDADELESWIYEKL-QAASDESYKETTNLQAKIQKHQAFEAE 346
DS Q F D +L SWI +SDE K+ T +A +++HQ E
Sbjct: 2 GHHHHHHSHDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTE 61
Query: 347 VAAHSNAIVVLDNTGND------------------------------------------- 363
+ A + + G
Sbjct: 62 IDARAGTFQAFEQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLEL 121
Query: 364 --FYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTL 421
F+RDCEQAENWM+AREAFLN E+ D+VEALIKKHEDFDKAIN EEKI ALQ
Sbjct: 122 QLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAF 181
Query: 422 ADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKR 458
ADQLIAA HYA I +R +VLDRWR LK +IEKR
Sbjct: 182 ADQLIAAGHYAKGDISSRRNEVLDRWRRLKAQMIEKR 218
Score = 68.4 bits (167), Expect = 8e-13
Identities = 41/262 (15%), Positives = 78/262 (29%), Gaps = 45/262 (17%)
Query: 1102 LATKRKTKLMDNSAYLQFMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDA 1161
+ D+ +F+ + SWI V S+E +D++ + LL + +
Sbjct: 1 MGHHHHHHSHDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRT 60
Query: 1162 GLHAFEHEGIQNITTLKDQLVASNHDQTPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQ 1221
+ A Q QL+A H +P I ++ + L R+ L +
Sbjct: 61 EIDARA-GTFQAFEQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCL 119
Query: 1222 EQFRQIEDLYLTFAKKASSFNKPQPLSRDMEMSLQDGRSYLEIPMPGNNVFSASSFNSWF 1281
E D +W
Sbjct: 120 ELQLFHRD--------------------------------------------CEQAENWM 135
Query: 1282 ENAEEDLTDPVRCNSIEEIRALREAHAQFQASLSSAQADFEALAALDQQIKSFNVGPNPY 1341
E L + +S++ + AL + H F +++ + AL A Q+ +
Sbjct: 136 AAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAFADQLIAAGHYAKGD 195
Query: 1342 TWFTMEALEDTWRNLQKIIKER 1363
+ D WR L+ + E+
Sbjct: 196 ISSRRNEVLDRWRRLKAQMIEK 217
Score = 63.4 bits (154), Expect = 5e-11
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Query: 1 MEQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTS 60
++ + L A ++ L + + Q F+R E E W++ E L +ED G L S
Sbjct: 94 LDILDQERADLEKAWVQRRMMLDQCLELQLFHRDCEQAENWMAAREAFLNTEDKGDSLDS 153
Query: 61 VQNLQKKHALLEADVASHLDRIESVKAATEQFLE--HYGKD--EDSSEALLKKHEALVSD 116
V+ L KKH + + ++I +++A +Q + HY K +L + L +
Sbjct: 154 VEALIKKHEDFDKAINVQEEKIAALQAFADQLIAAGHYAKGDISSRRNEVLDRWRRLKAQ 213
Query: 117 LE 118
+
Sbjct: 214 MI 215
Score = 52.6 bits (126), Expect = 2e-07
Identities = 16/95 (16%), Positives = 37/95 (38%)
Query: 15 TEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTSVQNLQKKHALLEAD 74
+ ++ Q F D+ W++ I G + S++ KD+T + L ++H +
Sbjct: 2 GHHHHHHSHDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTE 61
Query: 75 VASHLDRIESVKAATEQFLEHYGKDEDSSEALLKK 109
+ + ++ + +Q L H + L
Sbjct: 62 IDARAGTFQAFEQFGQQLLAHGHYASPEIKQKLDI 96
Score = 40.3 bits (94), Expect = 0.003
Identities = 27/201 (13%), Positives = 60/201 (29%), Gaps = 13/201 (6%)
Query: 1273 SASSFNSWFENAEEDLTDPVRCNSIEEIRALREAHAQFQASLSSAQADFEALAALDQQIK 1332
SW ++ + AL E H + + + + F+A QQ+
Sbjct: 21 DFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLL 80
Query: 1333 SFNVGPNPYTWFTMEALEDTWRNLQKIIKERDIELAKEATRQDENDALRKEFAKHANAFH 1392
+ +P ++ L+ +L+K +R + L + Q F +
Sbjct: 81 AHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLELQ--------LFHRDCEQAE 132
Query: 1393 QWLTETRTSM-MEGTGSLEQQLEAIKRK----AAEVRSRRSDLKKIEDLGAILEEHLILD 1447
W+ + E G +EA+ +K + + + ++ L
Sbjct: 133 NWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAFADQLIAAGHYA 192
Query: 1448 NRYTEHSTVGLAQQWDQLDQL 1468
+ +W +L
Sbjct: 193 KGDISSRRNEVLDRWRRLKAQ 213
Score = 33.0 bits (75), Expect = 0.49
Identities = 22/155 (14%), Positives = 51/155 (32%), Gaps = 43/155 (27%)
Query: 225 ANDIQERREQVLNRYADFKSEARSKREKLEDITVKEVKILETANDIQERREQVLNRYADF 284
+ +I+++ + + AD + +R
Sbjct: 87 SPEIKQKLDILDQERADLEKAWVQRR---------------------------------- 112
Query: 285 KSEARSKREKLEDSRRFQYFKRDADELESWIYEKLQAASDESYKET-TNLQAKIQKHQAF 343
L+ Q F RD ++ E+W+ + + E ++ +++A I+KH+ F
Sbjct: 113 --------MMLDQCLELQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDF 164
Query: 344 EAEVAAHSNAIVVLDNTGNDFYRDCEQAENWMSAR 378
+ + I L + A+ +S+R
Sbjct: 165 DKAINVQEEKIAALQAFADQLIAAGHYAKGDISSR 199
Score = 29.9 bits (67), Expect = 5.8
Identities = 17/106 (16%), Positives = 35/106 (33%), Gaps = 5/106 (4%)
Query: 1383 EFAKHANAFHQWLTETRTSMMEGT-----GSLEQQLEAIKRKAAEVRSRRSDLKKIEDLG 1437
F W+ R + E LE + E+ +R + E G
Sbjct: 17 RFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFG 76
Query: 1438 AILEEHLILDNRYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQAR 1483
L H + + L Q+ L++ ++ + L+Q ++ +
Sbjct: 77 QQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLELQ 122
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of
spectrin, alpha helical linker region, 3- helix
coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP:
a.7.1.1 a.7.1.1
Length = 214
Score = 154 bits (390), Expect = 2e-42
Identities = 52/210 (24%), Positives = 104/210 (49%), Gaps = 1/210 (0%)
Query: 905 HQFFRDIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQET 964
F +D+ D ++W+ + V S+D L + L ++H ++ E+ HQ + Q V+E+
Sbjct: 3 QAFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKES 62
Query: 965 GEKLMDVS-NLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESLTYQHFLAKVEEEEAW 1023
GEK++ + + QRL+ L+ W L ++ +R L + L +Q F ++ EA
Sbjct: 63 GEKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEAI 122
Query: 1024 ISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEAKNHHAD 1083
+S ++ L+ + D++ A + ++K + F +RD+ +GNKL+ N ++D
Sbjct: 123 LSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNLYSD 182
Query: 1084 SITQRCQQLQLKLDNLMALATKRKTKLMDN 1113
I ++ Q ++ + A + L DN
Sbjct: 183 KIKEKVQLIEDRHRKNNEKAQEASVLLRDN 212
Score = 133 bits (335), Expect = 3e-35
Identities = 30/212 (14%), Positives = 92/212 (43%), Gaps = 1/212 (0%)
Query: 798 QRTYIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNG 857
++ ++ + D WL + + SED + L + L+++H ++ +I H D + +
Sbjct: 2 EQAFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKE 61
Query: 858 QADSLID-SGQFDASSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQFFRDIADEES 916
+ +I + + ++ + ++ ++ + + R L + +F +D E+
Sbjct: 62 SGEKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEA 121
Query: 917 WIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMDVSNLGV 976
+ ++ + + L + +K + + +++ + + ++G KL+ NL
Sbjct: 122 ILSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNLYS 181
Query: 977 PEIEQRLKLLNQAWSELKQLAANRGQKLDESL 1008
+I+++++L+ + + A L ++L
Sbjct: 182 DKIKEKVQLIEDRHRKNNEKAQEASVLLRDNL 213
Score = 123 bits (310), Expect = 7e-32
Identities = 39/211 (18%), Positives = 83/211 (39%), Gaps = 2/211 (0%)
Query: 692 QQFSRDADEMENWIAEKL-QLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAM 750
Q F +D D+ + W++ +A+E+ + + Q+H + E+ + D Q V
Sbjct: 3 QAFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKES 62
Query: 751 GQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLDF 810
G+ +I + + RL + W+ L + +S L + + + K +
Sbjct: 63 GEKVIQGQT-DPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEA 121
Query: 811 WLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDSGQFDA 870
L E L + L + + I+K + ++ + D++ + L+ G +
Sbjct: 122 ILSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNLYS 181
Query: 871 SSIQEKRQSINERYERIKNLAAHRQARLNEA 901
I+EK Q I +R+ + A L +
Sbjct: 182 DKIKEKVQLIEDRHRKNNEKAQEASVLLRDN 212
Score = 121 bits (306), Expect = 3e-31
Identities = 48/222 (21%), Positives = 95/222 (42%), Gaps = 13/222 (5%)
Query: 468 QQFSRDADEMENWIAEKL-QLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAM 526
Q F +D D+ + W++ +A+E+ + + Q+H + E+ + D Q V
Sbjct: 3 QAFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKES 62
Query: 527 GQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLPY 586
G+ +I + + RL + W+ L + +S L + + +
Sbjct: 63 GEKVIQGQT-DPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEF--------- 112
Query: 587 FSKKDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLA 646
+KD +QAE +S +E L E + EA I+K EDF ++ + +K+ +
Sbjct: 113 --QKDAKQAEAILSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSG 170
Query: 647 DQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGES 688
++L+A + + I +K + + DR R E E L ++
Sbjct: 171 NKLVAEGNLYSDKIKEKVQLIEDRHRKNNEKAQEASVLLRDN 212
Score = 111 bits (279), Expect = 1e-27
Identities = 35/210 (16%), Positives = 87/210 (41%), Gaps = 4/210 (1%)
Query: 364 FYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLAD 423
F +D + + W+S + + +E++ E L+++H I+ H++ ++ +
Sbjct: 5 FLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESGE 64
Query: 424 QLIAADHYAAKP-IDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIA 482
++I + + + + W L + L + Q+F +DA + E ++
Sbjct: 65 KVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEAILS 124
Query: 483 EK-LQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEE 541
+ LA E ++ +K + F + N D++ S + G L+ + +
Sbjct: 125 NQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVA--EGNLYSD 182
Query: 542 AVQARLASIADQWEFLTQKTTEKSLKLKEA 571
++ ++ I D+ +K E S+ L++
Sbjct: 183 KIKEKVQLIEDRHRKNNEKAQEASVLLRDN 212
Score = 109 bits (273), Expect = 6e-27
Identities = 40/208 (19%), Positives = 88/208 (42%), Gaps = 2/208 (0%)
Query: 1011 QHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSA 1070
Q FL +++ +AW+S Q+ ++ ED +++ + LL++H + + H+D + +
Sbjct: 3 QAFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKES 62
Query: 1071 GNKLIEAKNHHA-DSITQRCQQLQLKLDNLMALATKRKTKLMDNSAYLQFMWKADVVESW 1129
G K+I+ + + QR + L D L + R L + +F A E+
Sbjct: 63 GEKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEAI 122
Query: 1130 IADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTLKDQLVASNHDQT 1189
++++E + E L + + K E F + + + + ++LVA + +
Sbjct: 123 LSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNR-DKVLSPVDSGNKLVAEGNLYS 181
Query: 1190 PAIVKRHGDVIARWQKLLGDSNARKQRL 1217
I ++ + R +K + L
Sbjct: 182 DKIKEKVQLIEDRHRKNNEKAQEASVLL 209
Score = 107 bits (269), Expect = 2e-26
Identities = 34/208 (16%), Positives = 86/208 (41%), Gaps = 4/208 (1%)
Query: 590 KDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQL 649
+D + + W+S + + +E++ E L+++H I+ H++ ++ +++
Sbjct: 7 QDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESGEKV 66
Query: 650 IAADHYAAKP-IDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIAEK 708
I + + + + W L + L + Q+F +DA + E ++ +
Sbjct: 67 IQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEAILSNQ 126
Query: 709 -LQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEEAV 767
LA E ++ +K + F + N D++ S + G L+ + + +
Sbjct: 127 EYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVA--EGNLYSDKI 184
Query: 768 QARLASIADQWEFLTQKTTEKSLKLKEA 795
+ ++ I D+ +K E S+ L++
Sbjct: 185 KEKVQLIEDRHRKNNEKAQEASVLLRDN 212
Score = 91.9 bits (228), Expect = 8e-21
Identities = 39/210 (18%), Positives = 78/210 (37%), Gaps = 47/210 (22%)
Query: 302 QYFKRDADELESWIYEKL-QAASDESYKETTNLQAKIQKHQAFEAEVAAHSNAIVVLDNT 360
Q F +D D+ ++W+ AS++ + + +Q+H + E+ H ++ + +
Sbjct: 3 QAFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKES 62
Query: 361 GND----------------------------------------------FYRDCEQAENW 374
G F +D +QAE
Sbjct: 63 GEKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEAI 122
Query: 375 MSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHYAAK 434
+S +E L E + EA I+K EDF ++ + +K+ + ++L+A + +
Sbjct: 123 LSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNLYSD 182
Query: 435 PIDDKRKQVLDRWRLLKEALIEKRSRLGES 464
I +K + + DR R E E L ++
Sbjct: 183 KIKEKVQLIEDRHRKNNEKAQEASVLLRDN 212
Score = 63.4 bits (154), Expect = 4e-11
Identities = 18/122 (14%), Positives = 46/122 (37%), Gaps = 4/122 (3%)
Query: 1 MEQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTS 60
+E + W++L E + + L + Q F + + E LS E L + L +
Sbjct: 82 LEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEAILSNQEYTLAHLEPPDSLEA 141
Query: 61 VQNLQKKHALLEADVASHLDRIESVKAATEQFLE--HYGKD--EDSSEALLKKHEALVSD 116
+ +K + ++ D++ S + + + + D ++ + + +H
Sbjct: 142 AEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNLYSDKIKEKVQLIEDRHRKNNEK 201
Query: 117 LE 118
+
Sbjct: 202 AQ 203
Score = 54.1 bits (130), Expect = 5e-08
Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 28 QQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTSVQNLQKKHALLEADVASHLDRIESVKA 87
+Q F + ++D + WLS + + SED + L + L ++HA ++ ++ H D + VK
Sbjct: 2 EQAFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKE 61
Query: 88 ATEQFLEHYGKDEDSSEALLKKHEALVSDLEAFGNTILGLREQAQSCRQ 136
+ E+ ++ + L ++ E L + +A G C
Sbjct: 62 SGEKVIQGQT--DPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLG 108
Score = 48.7 bits (116), Expect = 4e-06
Identities = 30/215 (13%), Positives = 66/215 (30%), Gaps = 14/215 (6%)
Query: 1273 SASSFNSWFENAEEDLTDPVRCNSIEEIRALREAHAQFQASLSSAQADFEALAALDQQIK 1332
F +W ++ + S+ E L + HA + + Q ++ + +++
Sbjct: 8 DLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESGEKVI 67
Query: 1333 SFNVGPN-PYTWFTMEALEDTWRNLQKIIKERDIELAKEATRQDENDALRKEFAKHANAF 1391
P +E L+ W L ++ + R L +EF K A
Sbjct: 68 QGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTL--------AQCLGFQEFQKDAKQA 119
Query: 1392 HQWLTETRTSM-MEGTGSLEQQLEAIKRK----AAEVRSRRSDLKKIEDLGAILEEHLIL 1446
L+ ++ + EA RK + + R + D G L L
Sbjct: 120 EAILSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNL 179
Query: 1447 DNRYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQ 1481
+ + + + + ++ L ++
Sbjct: 180 YSDKIKEKVQLIEDRHRKNNEKAQEASVLLRDNLE 214
Score = 32.5 bits (74), Expect = 0.74
Identities = 21/114 (18%), Positives = 44/114 (38%), Gaps = 14/114 (12%)
Query: 1380 LRKEFAKHANAFHQWLTETRTSMMEGT-----GSLEQQLEAIKRKAAEVRSRRSDLKKIE 1434
+ + F + + F WL+ T+ ++ EQ L+ E+ + ++++
Sbjct: 1 MEQAFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVK 60
Query: 1435 DLGAILEEHLILDNRYTEHSTVG-----LAQQWDQLDQLGMRMQHNLEQQIQAR 1483
+ G E +I E+ +G L WD L ++ H L Q + +
Sbjct: 61 ESG----EKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQ 110
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat
structural protein, crosslinking; 2.22A {Homo sapiens}
Length = 210
Score = 149 bits (377), Expect = 6e-41
Identities = 45/210 (21%), Positives = 83/210 (39%), Gaps = 6/210 (2%)
Query: 798 QRTYIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNG 857
+ + + ++DL W+ E + + + G DL SV+ + H+ + I+ +I+
Sbjct: 7 EDSTLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARS 66
Query: 858 QADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQFFRDIADEESW 917
GQ ++ R + + L +ARL +LH F E W
Sbjct: 67 D------EGQLSPATRGAYRDCLGRLDLQYAKLLNSSKARLRSLESLHSFVAAATKELMW 120
Query: 918 IKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMDVSNLGVP 977
+ EK+ D+ T + K+ + L EL + I+ +Q G++L+ + P
Sbjct: 121 LNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPARP 180
Query: 978 EIEQRLKLLNQAWSELKQLAANRGQKLDES 1007
+E L WS + QL L E+
Sbjct: 181 TVESFQAALQTQWSWMLQLCCCIEAHLKEN 210
Score = 133 bits (337), Expect = 2e-35
Identities = 35/208 (16%), Positives = 83/208 (39%), Gaps = 6/208 (2%)
Query: 906 QFFRDIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETG 965
R + D +W++E + V ++G DL V+ H+ L + + I+ +
Sbjct: 9 STLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARSDE 68
Query: 966 EKLMDVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESLTYQHFLAKVEEEEAWIS 1025
+L L L+ +++L + R + L+ F+A +E W++
Sbjct: 69 GQLSPA---TRGAYRDCLGRLDLQYAKLLNSSKARLRSLES---LHSFVAAATKELMWLN 122
Query: 1026 EKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEAKNHHADSI 1085
EK++ D+ D + + + A + + + ++ +AG++L+ + ++
Sbjct: 123 EKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPARPTV 182
Query: 1086 TQRCQQLQLKLDNLMALATKRKTKLMDN 1113
LQ + ++ L + L +N
Sbjct: 183 ESFQAALQTQWSWMLQLCCCIEAHLKEN 210
Score = 106 bits (265), Expect = 7e-26
Identities = 33/208 (15%), Positives = 69/208 (33%), Gaps = 7/208 (3%)
Query: 1010 YQHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICS 1069
L +++ AW+ E Q + ++G + +V+ L H R + S
Sbjct: 7 EDSTLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARS 66
Query: 1070 AGNKLIEAKNHHADSITQRCQQLQLKLDNLMALATKRKTKLMDNSAYLQFMWKADVVESW 1129
+L A + +L L+ L+ + R L + F+ A W
Sbjct: 67 DEGQLSPAT---RGAYRDCLGRLDLQYAKLLNSSKARLRSLE---SLHSFVAAATKELMW 120
Query: 1130 IADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTLKDQLVASNHDQT 1189
+ +KE ++ + + L E + I+ + D+L+ +H
Sbjct: 121 LNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKK-IKELQNAGDRLLREDHPAR 179
Query: 1190 PAIVKRHGDVIARWQKLLGDSNARKQRL 1217
P + + +W +L + L
Sbjct: 180 PTVESFQAALQTQWSWMLQLCCCIEAHL 207
Score = 104 bits (261), Expect = 3e-25
Identities = 40/210 (19%), Positives = 82/210 (39%), Gaps = 9/210 (4%)
Query: 362 NDFYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTL 421
+ R + W+ + ++ E +VEA + H ++I KI ++
Sbjct: 8 DSTLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARSD 67
Query: 422 ADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWI 481
QL A A + D ++ ++ L + ++RL ++L F A + W+
Sbjct: 68 EGQLSPATRGAYR---DCLGRLDLQYAKLLNS---SKARLRSLESLHSFVAAATKELMWL 121
Query: 482 AEKLQLATEESY-KDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSE 540
EK + + N+ +K + + A EL +I+ + G L+ + +
Sbjct: 122 NEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDH--PAR 179
Query: 541 EAVQARLASIADQWEFLTQKTTEKSLKLKE 570
V++ A++ QW ++ Q LKE
Sbjct: 180 PTVESFQAALQTQWSWMLQLCCCIEAHLKE 209
Score = 104 bits (260), Expect = 3e-25
Identities = 27/213 (12%), Positives = 75/213 (35%), Gaps = 9/213 (4%)
Query: 689 QTLQQFSRDADEMENWIAEKLQLATEESY-KDPANIQSKHQKHQAFEAELAANADRIQSV 747
+ R ++ W+ E + D +++++ H+ + +I+
Sbjct: 5 ELEDSTLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERA 64
Query: 748 LAMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKD 807
+ L + A + L + Q+ L + + L+ +++AA
Sbjct: 65 RSDEGQLSPATR-----GAYRDCLGRLDLQYAKLLNSSKAR---LRSLESLHSFVAAATK 116
Query: 808 LDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDSGQ 867
WL E E D ++ + + + +++ + +IK++ D L+
Sbjct: 117 ELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDH 176
Query: 868 FDASSIQEKRQSINERYERIKNLAAHRQARLNE 900
+++ + ++ ++ + L +A L E
Sbjct: 177 PARPTVESFQAALQTQWSWMLQLCCCIEAHLKE 209
Score = 101 bits (252), Expect = 4e-24
Identities = 39/209 (18%), Positives = 82/209 (39%), Gaps = 9/209 (4%)
Query: 587 FSKKDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLA 646
+ + + W+ + ++ E +VEA + H ++I KI ++
Sbjct: 9 STLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARSDE 68
Query: 647 DQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIA 706
QL A A + D ++ ++ L + ++RL ++L F A + W+
Sbjct: 69 GQLSPATRGAYR---DCLGRLDLQYAKLLNS---SKARLRSLESLHSFVAAATKELMWLN 122
Query: 707 EKLQLATEESY-KDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEE 765
EK + + N+ +K + + A EL +I+ + G L+ + +
Sbjct: 123 EKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDH--PARP 180
Query: 766 AVQARLASIADQWEFLTQKTTEKSLKLKE 794
V++ A++ QW ++ Q LKE
Sbjct: 181 TVESFQAALQTQWSWMLQLCCCIEAHLKE 209
Score = 97.3 bits (242), Expect = 8e-23
Identities = 29/225 (12%), Positives = 75/225 (33%), Gaps = 20/225 (8%)
Query: 465 QTLQQFSRDADEMENWIAEKLQLATEESY-KDPANIQSKHQKHQAFEAELAANADRIQSV 523
+ R ++ W+ E + D +++++ H+ + +I+
Sbjct: 5 ELEDSTLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERA 64
Query: 524 LAMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKD 583
+ L + A + L + Q+ L + + L+ +
Sbjct: 65 RSDEGQLSPATR-----GAYRDCLGRLDLQYAKLLNSSKARLRSLESLHSFV-------- 111
Query: 584 LPYFSKKDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQ 643
+ W++ +E + + N+ A + + + + E+KI LQ
Sbjct: 112 ------AAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQ 165
Query: 644 TLADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGES 688
D+L+ DH A ++ + + +W + + + L E+
Sbjct: 166 NAGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKEN 210
Score = 82.7 bits (204), Expect = 1e-17
Identities = 25/209 (11%), Positives = 60/209 (28%), Gaps = 40/209 (19%)
Query: 296 EDSRRFQYFKRDADELESWIYEKLQAASDESYKET-TNLQAKIQKHQAFEAEVAAHSNAI 354
R +L +W+ E + +++A++ H+ + I
Sbjct: 2 SHMELEDSTLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKI 61
Query: 355 VVLDNTGN---------------------------------------DFYRDCEQAENWM 375
+ F + W+
Sbjct: 62 ERARSDEGQLSPATRGAYRDCLGRLDLQYAKLLNSSKARLRSLESLHSFVAAATKELMWL 121
Query: 376 SAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHYAAKP 435
+ +E + + N+ A + + + + E+KI LQ D+L+ DH A
Sbjct: 122 NEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPARPT 181
Query: 436 IDDKRKQVLDRWRLLKEALIEKRSRLGES 464
++ + + +W + + + L E+
Sbjct: 182 VESFQAALQTQWSWMLQLCCCIEAHLKEN 210
Score = 58.1 bits (140), Expect = 3e-09
Identities = 20/118 (16%), Positives = 45/118 (38%), Gaps = 1/118 (0%)
Query: 23 QEASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTSVQNLQKKHALLEADVASHLDRI 82
+ R ++D+ W+ E + ++ ++G DL SV+ H L + +I
Sbjct: 2 SHMELEDSTLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKI 61
Query: 83 ESVKAATEQFL-EHYGKDEDSSEALLKKHEALVSDLEAFGNTILGLREQAQSCRQQET 139
E ++ Q G D L ++ L++ +A ++ L + ++
Sbjct: 62 ERARSDEGQLSPATRGAYRDCLGRLDLQYAKLLNSSKARLRSLESLHSFVAAATKELM 119
Score = 56.1 bits (135), Expect = 1e-08
Identities = 15/101 (14%), Positives = 39/101 (38%), Gaps = 2/101 (1%)
Query: 2 EQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTSV 61
+ + L A +L+ F +WL+E E + + D+ T++
Sbjct: 81 DCLGRLDLQYAKLLNSSKARLRSLESLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNM 140
Query: 62 QNLQKKHALLEADVASHLDRIESVKAATEQFLE--HYGKDE 100
++ ++ L ++ +I+ ++ A ++ L H +
Sbjct: 141 TAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPARPT 181
Score = 51.5 bits (123), Expect = 4e-07
Identities = 31/242 (12%), Positives = 65/242 (26%), Gaps = 51/242 (21%)
Query: 1126 VESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTLKDQLVASN 1185
+ +W+ + + V E+G DL +V+ L + F + I + +
Sbjct: 17 LLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAK----IERARSDEGQLS 72
Query: 1186 HDQTPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQIEDLYLTFAKKASSFNKPQ 1245
A G + ++ KLL S AR + L +
Sbjct: 73 PATRGAYRDCLGRLDLQYAKLLNSSKARLRSLESLHSFVAAATKE--------------- 117
Query: 1246 PLSRDMEMSLQDGRSYLEIPMPGNNVFSASSFNSWFENAEEDLTDPVRCNSIEEIRALRE 1305
W EE+ + + A +E
Sbjct: 118 --------------------------------LMWLNEKEEEEVGFDWSDRNTNMTAKKE 145
Query: 1306 AHAQFQASLSSAQADFEALAALDQQIKSFNVGPNPYTWFTMEALEDTWRNLQKIIKERDI 1365
+++ L + + L ++ + P AL+ W + ++ +
Sbjct: 146 SYSALMRELELKEKKIKELQNAGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEA 205
Query: 1366 EL 1367
L
Sbjct: 206 HL 207
Score = 37.6 bits (87), Expect = 0.015
Identities = 29/211 (13%), Positives = 64/211 (30%), Gaps = 19/211 (9%)
Query: 1273 SASSFNSWFENAEEDLTDPVRCNSIEEIRALREAHAQFQASLSSAQADFEALAALDQQIK 1332
+W E + + + + A +H S+ +A E + + Q
Sbjct: 13 YLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARSDEGQ-- 70
Query: 1333 SFNVGPNPYTWFTMEALEDTWRNLQKIIKERDIELAKEATRQDENDALRKEFAKHANAFH 1392
+ L ++ + L R ++L F A
Sbjct: 71 -----------LSPATRGAYRDCLGRLDLQYAKLLNSSKARLRSLESLHS-FVAAATKEL 118
Query: 1393 QWLTETRTSMM-----EGTGSLEQQLEAIKRKAAEVRSRRSDLKKIEDLGAILEEHLILD 1447
WL E + + ++ + E+ E+ + +K++++ G L
Sbjct: 119 MWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPA 178
Query: 1448 NRYTEHSTVGLAQQWDQLDQLGMRMQHNLEQ 1478
E L QW + QL ++ +L++
Sbjct: 179 RPTVESFQAALQTQWSWMLQLCCCIEAHLKE 209
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote
intermediate filament, crosslinking; 2.95A {Homo sapiens}
Length = 283
Score = 147 bits (373), Expect = 2e-39
Identities = 44/225 (19%), Positives = 84/225 (37%), Gaps = 6/225 (2%)
Query: 896 ARLNEANTLHQFFRDIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQ 955
+ + +LH F E W+ EK+ D+ T + K+ + L EL +
Sbjct: 2 SHMRSLESLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKE 61
Query: 956 PAIQNVQETGEKLMDVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESLTYQHFLA 1015
I+ +Q G++L+ + P +E L WS + QL L E+ Y F +
Sbjct: 62 KKIKELQNAGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFFS 121
Query: 1016 KVEEEEAWISEKQQLL---SVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGN 1072
V E E + + Q+ L D T+ ++ LL+ + + ++ + +
Sbjct: 122 DVREAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAK 181
Query: 1073 KLIEAKNHHADSITQRCQQLQLKLDNLMALATKRK---TKLMDNS 1114
+++ K H + L D T K +L+ +
Sbjct: 182 AVVQLKPRHPAHPMRGRLPLLAVCDYKQVEVTVHKGDECQLVGPA 226
Score = 116 bits (292), Expect = 9e-29
Identities = 29/206 (14%), Positives = 79/206 (38%), Gaps = 4/206 (1%)
Query: 1001 GQKLDESLTYQHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVH 1060
G + + F+A +E W++EK++ D+ D + + + A + +
Sbjct: 1 GSHMRSLESLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELK 60
Query: 1061 RDRCADICSAGNKLIEAKNHHADSITQRCQQLQLKLDNLMALATKRKTKLMDNSAYLQFM 1120
+ ++ +AG++L+ + ++ LQ + ++ L + L +N+AY QF
Sbjct: 61 EKKIKELQNAGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFF 120
Query: 1121 WKADVVESWIADKETHVK---SEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTL 1177
E + + ++ S + ++ ++ LL + L+ ++ + +
Sbjct: 121 SDVREAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGH-LSGLAKR 179
Query: 1178 KDQLVASNHDQTPAIVKRHGDVIARW 1203
+V ++ ++A
Sbjct: 180 AKAVVQLKPRHPAHPMRGRLPLLAVC 205
Score = 114 bits (287), Expect = 4e-28
Identities = 25/195 (12%), Positives = 78/195 (40%), Gaps = 3/195 (1%)
Query: 791 KLKEANKQRTYIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDD 850
++ +++AA WL E E D ++ + + + +++ +
Sbjct: 3 HMRSLESLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEK 62
Query: 851 RIKDMNGQADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQFFRD 910
+IK++ D L+ +++ + ++ ++ + L +A L E QFF D
Sbjct: 63 KIKELQNAGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFFSD 122
Query: 911 IADEESWIKEKKLLVG---SDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEK 967
+ + E +++ + + S D +T +++L + + + +L ++ + + + +
Sbjct: 123 VREAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAKA 182
Query: 968 LMDVSNLGVPEIEQR 982
++ + +
Sbjct: 183 VVQLKPRHPAHPMRG 197
Score = 109 bits (273), Expect = 3e-26
Identities = 32/206 (15%), Positives = 80/206 (38%), Gaps = 6/206 (2%)
Query: 683 SRLGESQTLQQFSRDADEMENWIAEKLQLATEESY-KDPANIQSKHQKHQAFEAELAANA 741
S + ++L F A + W+ EK + + N+ +K + + A EL
Sbjct: 2 SHMRSLESLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKE 61
Query: 742 DRIQSVLAMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTY 801
+I+ + G L+ + + V++ A++ QW ++ Q LKE +
Sbjct: 62 KKIKELQNAGDRLLREDH--PARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQF 119
Query: 802 IAAVKDLDFWLGEVESLL---TSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQ 858
+ V++ + L +++ L S D + +++L++ Q + + + + + +
Sbjct: 120 FSDVREAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKR 179
Query: 859 ADSLIDSGQFDASSIQEKRQSINERY 884
A +++ + R +
Sbjct: 180 AKAVVQLKPRHPAHPMRGRLPLLAVC 205
Score = 108 bits (270), Expect = 7e-26
Identities = 26/177 (14%), Positives = 64/177 (36%), Gaps = 4/177 (2%)
Query: 363 DFYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLA 422
F + W++ +E + + N+ A + + + + E+KI LQ
Sbjct: 12 SFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAG 71
Query: 423 DQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIA 482
D+L+ DH A ++ + + +W + + + L E+ QF D E E +
Sbjct: 72 DRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFFSDVREAEGQLQ 131
Query: 483 EKL----QLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQ 535
+ + + + ++ Q Q + +L + + + ++ +
Sbjct: 132 KLQEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAKAVVQLKP 188
Score = 103 bits (259), Expect = 2e-24
Identities = 25/173 (14%), Positives = 63/173 (36%), Gaps = 4/173 (2%)
Query: 591 DCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLI 650
+ W++ +E + + N+ A + + + + E+KI LQ D+L+
Sbjct: 16 AATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLL 75
Query: 651 AADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIAEKL- 709
DH A ++ + + +W + + + L E+ QF D E E + +
Sbjct: 76 REDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFFSDVREAEGQLQKLQE 135
Query: 710 ---QLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQ 759
+ + + ++ Q Q + +L + + + ++ +
Sbjct: 136 ALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAKAVVQLKP 188
Score = 102 bits (254), Expect = 1e-23
Identities = 34/213 (15%), Positives = 75/213 (35%), Gaps = 17/213 (7%)
Query: 459 SRLGESQTLQQFSRDADEMENWIAEKLQLATEESY-KDPANIQSKHQKHQAFEAELAANA 517
S + ++L F A + W+ EK + + N+ +K + + A EL
Sbjct: 2 SHMRSLESLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKE 61
Query: 518 DRIQSVLAMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTY 577
+I+ + G L+ + + V++ A++ QW ++ Q LKE +
Sbjct: 62 KKIKELQNAGDRLLREDH--PARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQF 119
Query: 578 IAAVKDLPYFSKKDCEQAENWMSAREAFLNA---EEVDSKTDNVEALIKKHEDFDKAINA 634
D +AE + + L + + +E L++ +D + +N
Sbjct: 120 F-----------SDVREAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNE 168
Query: 635 HEEKIGALQTLADQLIAADHYAAKPIDDKRKQV 667
++ + L A ++ R +
Sbjct: 169 YKGHLSGLAKRAKAVVQLKPRHPAHPMRGRLPL 201
Score = 84.3 bits (208), Expect = 1e-17
Identities = 29/200 (14%), Positives = 61/200 (30%), Gaps = 45/200 (22%)
Query: 1 MEQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTS 60
+ W + L+E + F + + E L +++ L +
Sbjct: 89 QAALQTQWSWMLQLCCCIEAHLKENAAYFQFFSDVREAEGQLQKLQEALRRK-------- 140
Query: 61 VQNLQKKHALLEADVASHLDRIESVKAATEQFLEHYGKDEDSSEALLKKHEALVSDLEAF 120
+ E LL+ + L +
Sbjct: 141 -------------------------------YSCDRSATVTRLEDLLQDAQDEKEQLNEY 169
Query: 121 GNTILGLREQAQSC--RQQETPVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSN 178
+ GL ++A++ + P + G+ ++A+ DY + EV++ K D L+
Sbjct: 170 KGHLSGLAKRAKAVVQLKPRHPAHPMRGRLPLLAVCDYKQV---EVTVHKGDECQLVGPA 226
Query: 179 NKDWWKVEVND-RQGFVPAA 197
WKV + + VP+
Sbjct: 227 QPSHWKVLSSSGSEAAVPSV 246
Score = 63.2 bits (153), Expect = 1e-10
Identities = 24/227 (10%), Positives = 57/227 (25%), Gaps = 48/227 (21%)
Query: 1108 TKLMDNSAYLQFMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFE 1167
+ + + F+ A W+ +KE ++ + + L E
Sbjct: 2 SHMRSLESLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKE 61
Query: 1168 HEGIQNITTLKDQLVASNHDQTPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQI 1227
+ I+ + D+L+ +H P + + +W +L + L F+
Sbjct: 62 KK-IKELQNAGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFF 120
Query: 1228 EDLYLTFAKKASSFNKPQPLSRDMEMSLQDGRSYLEIPMPGNNVFSASSFNSWFENAEED 1287
D + +E
Sbjct: 121 SD--------------------------------------------VREAEGQLQKLQEA 136
Query: 1288 LTDPVRC---NSIEEIRALREAHAQFQASLSSAQADFEALAALDQQI 1331
L C ++ + L + + L+ + LA + +
Sbjct: 137 LRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAKAV 183
Score = 58.2 bits (140), Expect = 6e-09
Identities = 19/160 (11%), Positives = 51/160 (31%), Gaps = 8/160 (5%)
Query: 233 EQVLNRYADFKSEARSKREKLEDITVKEVKILE----TANDIQERREQVLNRYADFKSEA 288
Y+ E K +K++++ ++L ++ + + +++
Sbjct: 44 TAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPARPTVESFQAALQTQWSWMLQLC 103
Query: 289 RSKREKLEDSRRFQYFKRDADELESWIYEKLQA----ASDESYKETTNLQAKIQKHQAFE 344
L+++ + F D E E + + +A S + T L+ +Q Q +
Sbjct: 104 CCIEAHLKENAAYFQFFSDVREAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQDEK 163
Query: 345 AEVAAHSNAIVVLDNTGNDFYRDCEQAENWMSAREAFLNA 384
++ + + L + + L A
Sbjct: 164 EQLNEYKGHLSGLAKRAKAVVQLKPRHPAHPMRGRLPLLA 203
Score = 30.0 bits (67), Expect = 6.3
Identities = 19/185 (10%), Positives = 56/185 (30%), Gaps = 10/185 (5%)
Query: 1279 SWFENAEEDLTDPVRCNSIEEIRALREAHAQFQASLSSAQADFEALAALDQQIKSFNVGP 1338
W EE+ + + A +E+++ L + + L ++ +
Sbjct: 22 MWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPA 81
Query: 1339 NPYTWFTMEALEDTWRNLQKIIKERDIELAKEATRQDENDALRKEFAKHANAFHQWLTET 1398
P AL+ W + ++ + L KE +F L +
Sbjct: 82 RPTVESFQAALQTQWSWMLQLCCCIEAHL-KENAAY-------FQFFSDVREAEGQLQKL 133
Query: 1399 RTSMM-EGTGSLEQQLEAIKRKAAEVRSRRSDLKKIED-LGAILEEHLILDNRYTEHSTV 1456
+ ++ + + + ++ + + + L + + L + + + H
Sbjct: 134 QEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAKAVVQLKPRHPAH 193
Query: 1457 GLAQQ 1461
+ +
Sbjct: 194 PMRGR 198
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin,
ankyrin-binding domain, actin capping, AC binding,
cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB:
3f57_A
Length = 218
Score = 140 bits (353), Expect = 1e-37
Identities = 56/218 (25%), Positives = 93/218 (42%), Gaps = 3/218 (1%)
Query: 903 TLHQFFRDIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAEL-ASHQPAIQNV 961
+L Q R+ D E WI EK+L+ S + G+D V L+ K + E A Q + NV
Sbjct: 2 SLFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNV 61
Query: 962 QETGEKLMDVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESLTYQHFLAKVEEEE 1021
E+L+D + I + LN+ W++L +L R Q L S + E
Sbjct: 62 NAFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEIL 121
Query: 1022 AWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEAKNH- 1080
I EK + L ED G + + + H AFE + + + +L A
Sbjct: 122 GLIDEKHRELP-EDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAGE 180
Query: 1081 HADSITQRCQQLQLKLDNLMALATKRKTKLMDNSAYLQ 1118
A++I + Q++ L+ R+T+L+D + +
Sbjct: 181 KAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKFR 218
Score = 134 bits (339), Expect = 1e-35
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 3/213 (1%)
Query: 801 YIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQA-HDDRIKDMNGQA 859
DL+ W+ E E + +S + G+D V L K + + A +R+ ++N
Sbjct: 6 LKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFI 65
Query: 860 DSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQFFRDIADEESWIK 919
+ LID+G +A++I E + +NE + + L R L + LH++F A+ I
Sbjct: 66 ERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLID 125
Query: 920 EKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMDV-SNLGVPE 978
EK + +D G D + ++ + H E EL +Q Q+ +L +
Sbjct: 126 EKHREL-PEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAGEKAEA 184
Query: 979 IEQRLKLLNQAWSELKQLAANRGQKLDESLTYQ 1011
I+ + + ++ AW L A R +L ++
Sbjct: 185 IQNKEQEVSAAWQALLDACAGRRTQLVDTADKF 217
Score = 124 bits (312), Expect = 5e-32
Identities = 47/213 (22%), Positives = 89/213 (41%), Gaps = 2/213 (0%)
Query: 363 DFYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINA-HEEKIGALQTL 421
R+ + E W+S +E ++ E+ D+V L K DF + A +E++ +
Sbjct: 5 QLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAF 64
Query: 422 ADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWI 481
++LI A H A I + + + + W L E + + L S L ++ E+ I
Sbjct: 65 IERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLI 124
Query: 482 AEKLQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEE 541
EK + E+ D + +S H+ H AFE EL ++Q + L +E
Sbjct: 125 DEKHRELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAGEKAEA 184
Query: 542 AVQARLASIADQWEFLTQKTTEKSLKLKEANKQ 574
+Q + ++ W+ L + +L + +
Sbjct: 185 -IQNKEQEVSAAWQALLDACAGRRTQLVDTADK 216
Score = 120 bits (302), Expect = 8e-31
Identities = 46/210 (21%), Positives = 89/210 (42%), Gaps = 2/210 (0%)
Query: 590 KDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINA-HEEKIGALQTLADQ 648
++ + E W+S +E ++ E+ D+V L K DF + A +E++ + ++
Sbjct: 8 RETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIER 67
Query: 649 LIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIAEK 708
LI A H A I + + + + W L E + + L S L ++ E+ I EK
Sbjct: 68 LIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEK 127
Query: 709 LQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEEAVQ 768
+ E+ D + +S H+ H AFE EL ++Q + L +E +Q
Sbjct: 128 HRELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAGEKAEA-IQ 186
Query: 769 ARLASIADQWEFLTQKTTEKSLKLKEANKQ 798
+ ++ W+ L + +L + +
Sbjct: 187 NKEQEVSAAWQALLDACAGRRTQLVDTADK 216
Score = 119 bits (300), Expect = 2e-30
Identities = 47/217 (21%), Positives = 92/217 (42%), Gaps = 4/217 (1%)
Query: 1011 QHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDF-SVHRDRCADICS 1069
+ ++ E WISEK+ + S + G V L K F + ++ ++R ++ +
Sbjct: 4 FQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNA 63
Query: 1070 AGNKLIEAKNHHADSITQRCQQLQLKLDNLMALATKRKTKLMDNSAYLQFMWKADVVESW 1129
+LI+A + A +I + L +L+ L R L + ++ + +
Sbjct: 64 FIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGL 123
Query: 1130 IADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTLKDQLVASNH-DQ 1188
I +K + E+ G D ST ++ F+ LH +Q + +L + ++
Sbjct: 124 IDEKHREL-PEDVGLDASTAESFHRVHTAFERELHLLG-VQVQQFQDVATRLQTAYAGEK 181
Query: 1189 TPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFR 1225
AI + +V A WQ LL R+ +L+ ++FR
Sbjct: 182 AEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKFR 218
Score = 113 bits (284), Expect = 3e-28
Identities = 43/220 (19%), Positives = 90/220 (40%), Gaps = 6/220 (2%)
Query: 690 TLQQFSRDADEMENWIAEKLQLATEESY-KDPANIQSKHQKHQAFEAELAANA-DRIQSV 747
+L Q R+ D++E WI+EK +A+ +D ++ K + F E A +R+ +V
Sbjct: 2 SLFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNV 61
Query: 748 LAMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKD 807
A + LID + + + W L + + L + Y +
Sbjct: 62 NAFIERLIDAGHS--EAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAE 119
Query: 808 LDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDSGQ 867
+ + E L ED G D ++ ++ + H E ++ +++ A L +
Sbjct: 120 ILGLIDEKHREL-PEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYA 178
Query: 868 FD-ASSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQ 906
+ A +IQ K Q ++ ++ + + A R+ +L + +
Sbjct: 179 GEKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKFR 218
Score = 100 bits (250), Expect = 9e-24
Identities = 44/231 (19%), Positives = 91/231 (39%), Gaps = 17/231 (7%)
Query: 466 TLQQFSRDADEMENWIAEKLQLATEESY-KDPANIQSKHQKHQAFEAELAANA-DRIQSV 523
+L Q R+ D++E WI+EK +A+ +D ++ K + F E A +R+ +V
Sbjct: 2 SLFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNV 61
Query: 524 LAMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKD 583
A + LID + + + W L + + L + Y
Sbjct: 62 NAFIERLIDAGHS--EAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRY------ 113
Query: 584 LPYFSKKDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQ 643
+ + + L E+V E+ + H F++ ++ ++ Q
Sbjct: 114 -----FYTGAEILGLIDEKHRELP-EDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQ 167
Query: 644 TLADQLIAADHY-AAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQ 693
+A +L A A+ I +K ++V W+ L +A +R++L ++ +
Sbjct: 168 DVATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKFR 218
Score = 75.0 bits (184), Expect = 4e-15
Identities = 39/262 (14%), Positives = 73/262 (27%), Gaps = 46/262 (17%)
Query: 1114 SAYLQFMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQN 1173
+ Q + D +E WI++KE S E G+D V L K F A E + N
Sbjct: 1 GSLFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDN 60
Query: 1174 ITTLKDQLVASNHDQTPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQIEDLYLT 1233
+ ++L+ + H + I + + W LL + R Q L + R
Sbjct: 61 VNAFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYT---- 116
Query: 1234 FAKKASSFNKPQPLSRDMEMSLQDGRSYLEIPMPGNNVFSASSFNSWFENAEEDLTDPVR 1293
+ + +L + V
Sbjct: 117 ----------------------------------------GAEILGLIDEKHRELPEDV- 135
Query: 1294 CNSIEEIRALREAHAQFQASLSSAQADFEALAALDQQIKSFNVGPNPYT-WFTMEALEDT 1352
+ H F+ L + + ++++ G + +
Sbjct: 136 GLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAA 195
Query: 1353 WRNLQKIIKERDIELAKEATRQ 1374
W+ L R +L A +
Sbjct: 196 WQALLDACAGRRTQLVDTADKF 217
Score = 63.1 bits (153), Expect = 5e-11
Identities = 21/148 (14%), Positives = 52/148 (35%), Gaps = 5/148 (3%)
Query: 230 ERREQVLNRYADFKSEARSKREKLEDITVKEVKILETAN-----DIQERREQVLNRYADF 284
+ + +++ DF E + ++ D ++ L A I E ++ + +AD
Sbjct: 34 DHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAEWKDGLNEMWADL 93
Query: 285 KSEARSKREKLEDSRRFQYFKRDADELESWIYEKLQAASDESYKETTNLQAKIQKHQAFE 344
++ + L S + E+ I EK + ++ + + ++ + H AFE
Sbjct: 94 LELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHRELPEDVGLDASTAESFHRVHTAFE 153
Query: 345 AEVAAHSNAIVVLDNTGNDFYRDCEQAE 372
E+ + + +
Sbjct: 154 RELHLLGVQVQQFQDVATRLQTAYAGEK 181
Score = 59.6 bits (144), Expect = 7e-10
Identities = 20/137 (14%), Positives = 51/137 (37%), Gaps = 10/137 (7%)
Query: 1 MEQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTS 60
+ + +W L + + L + + T +I + E + + ED G D ++
Sbjct: 83 KDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKH-RELPEDVGLDAST 141
Query: 61 VQNLQKKHALLEADVASHLDRIESVKAATEQFLEHYGKDEDSSEALLKKHEALVSDLEAF 120
++ + H E ++ +++ + + Y + +EA+ K + + + +A
Sbjct: 142 AESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYA--GEKAEAIQNKEQEVSAAWQA- 198
Query: 121 GNTILGLREQAQSCRQQ 137
L + R Q
Sbjct: 199 ------LLDACAGRRTQ 209
Score = 44.2 bits (104), Expect = 1e-04
Identities = 35/228 (15%), Positives = 76/228 (33%), Gaps = 20/228 (8%)
Query: 29 QGFNRTIEDIELWLSEIEGQLMSEDYGKDLTSVQNLQKKHALLEADV-ASHLDRIESVKA 87
R +D+E W+SE E S + G+D V L+ K + A +R+++V A
Sbjct: 4 FQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNA 63
Query: 88 ATEQFLEHYGKDEDSSEALLKKHEALVSDLEAFGNTILGLREQAQSCRQQETPVIDVTGK 147
E+ ++ + + + +DL +T + L + +
Sbjct: 64 FIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTG-----A 118
Query: 148 ECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEAGLT 207
E + + + + P +V + S + + + + +
Sbjct: 119 EILGLIDEKHRELPEDVGLDASTAESFHRV-----HTAFERE---------LHLLGVQVQ 164
Query: 208 ASQQNLADVKEVKILETANDIQERREQVLNRYADFKSEARSKREKLED 255
Q ++ E A IQ + ++V + +R +L D
Sbjct: 165 QFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDACAGRRTQLVD 212
Score = 35.4 bits (81), Expect = 0.095
Identities = 23/215 (10%), Positives = 56/215 (26%), Gaps = 14/215 (6%)
Query: 1274 ASSFNSWFENAEEDLTDPVRCNSIEEIRALREAHAQFQASLSSAQAD-FEALAALDQQIK 1332
W E + P + + LR+ F + + + + A +++
Sbjct: 10 TDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLI 69
Query: 1333 SFNVGPNPYTWFTMEALEDTWRNLQKIIKERDIELAKEATRQDENDALRKEFAKHANAFH 1392
+ L + W +L ++I R L +
Sbjct: 70 DAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLL--------AASYDLHRYFYTGAEIL 121
Query: 1393 QWLTETRTSMMEGTGSLEQQLEAIKRK----AAEVRSRRSDLKKIEDLGA-ILEEHLILD 1447
+ E + E G E+ R E+ +++ +D+ + +
Sbjct: 122 GLIDEKHRELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAGEK 181
Query: 1448 NRYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQA 1482
++ ++ W L + L
Sbjct: 182 AEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADK 216
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex,
three-helix bundle, alpha helix repeat, helical linker,
actin capping; 2.80A {Homo sapiens}
Length = 185
Score = 130 bits (327), Expect = 2e-34
Identities = 41/179 (22%), Positives = 81/179 (45%)
Query: 900 EANTLHQFFRDIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQ 959
+FF D SW++ + + + RD++ V+ L K H+ + AE+ +
Sbjct: 2 STADKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFS 61
Query: 960 NVQETGEKLMDVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESLTYQHFLAKVEE 1019
E GE L+ + EI ++L+ + E+ + R ++L L F
Sbjct: 62 ACLELGESLLQRQHQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDASV 121
Query: 1020 EEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEAK 1078
EAW+ ++ L+ D+G T+ +V+ L+K+H+AFE + +R A + ++ +
Sbjct: 122 AEAWLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALEKPTTLELKER 180
Score = 121 bits (305), Expect = 2e-31
Identities = 38/177 (21%), Positives = 79/177 (44%)
Query: 794 EANKQRTYIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIK 853
+ + + +DL W+ + + +++ +D++SV+ L+K HQ + A+I+
Sbjct: 2 STADKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFS 61
Query: 854 DMNGQADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQFFRDIAD 913
+SL+ + I+EK Q + R + + R RL + QF RD +
Sbjct: 62 ACLELGESLLQRQHQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDASV 121
Query: 914 EESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMD 970
E+W+ ++ + S D+G + V+ L K+H+ E AS +++ +
Sbjct: 122 AEAWLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALEKPTTLELK 178
Score = 115 bits (289), Expect = 2e-29
Identities = 40/198 (20%), Positives = 92/198 (46%), Gaps = 14/198 (7%)
Query: 462 GESQTLQQFSRDADEMENWIAEKL-QLATEESYKDPANIQSKHQKHQAFEAELAANADRI 520
G + +F A ++ +W+ + Q+ T+E +D ++++ + HQ AE+ +
Sbjct: 1 GSTADKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNF 60
Query: 521 QSVLAMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAA 580
+ L +G++L+ ++ E ++ +L + + + + +K + +L+ + +
Sbjct: 61 SACLELGESLLQRQHQASEE--IREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQF--- 115
Query: 581 VKDLPYFSKKDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIG 640
+D AE W+ A+E +L + + D+VE LIK+HE F+K+ + E+
Sbjct: 116 --------SRDASVAEAWLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFA 167
Query: 641 ALQTLADQLIAADHYAAK 658
AL+ + A +
Sbjct: 168 ALEKPTTLELKERQIAER 185
Score = 112 bits (281), Expect = 3e-28
Identities = 27/183 (14%), Positives = 72/183 (39%), Gaps = 1/183 (0%)
Query: 1006 ESLTYQHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCA 1065
+ F + + +W+ + + ++ +++V+ L+K H + +
Sbjct: 2 STADKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFS 61
Query: 1066 DICSAGNKLIEAKNHHADSITQRCQQLQLKLDNLMALATKRKTKLMDNSAYLQFMWKADV 1125
G L++ ++ ++ I ++ QQ+ + + R +L QF A V
Sbjct: 62 ACLELGESLLQRQHQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDASV 121
Query: 1126 VESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTLKDQLVASN 1185
E+W+ +E ++ S ++G + +V+ L+ + E F+ ++ E + +
Sbjct: 122 AEAWLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWA-ERFAALEKPTTLELKER 180
Query: 1186 HDQ 1188
Sbjct: 181 QIA 183
Score = 110 bits (276), Expect = 1e-27
Identities = 35/185 (18%), Positives = 81/185 (43%), Gaps = 3/185 (1%)
Query: 686 GESQTLQQFSRDADEMENWIAEKL-QLATEESYKDPANIQSKHQKHQAFEAELAANADRI 744
G + +F A ++ +W+ + Q+ T+E +D ++++ + HQ AE+ +
Sbjct: 1 GSTADKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNF 60
Query: 745 QSVLAMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAA 804
+ L +G++L+ ++ E ++ +L + + + + +K + +L+ + +
Sbjct: 61 SACLELGESLLQRQHQASEE--IREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRD 118
Query: 805 VKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLID 864
+ WL E L S D G + SV+ LIK+H+ E + +R + +
Sbjct: 119 ASVAEAWLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALEKPTTLELK 178
Query: 865 SGQFD 869
Q
Sbjct: 179 ERQIA 183
Score = 105 bits (264), Expect = 6e-26
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Query: 364 FYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLAD 423
F+ +WM + + +E +VE L+K H+ + I + A L +
Sbjct: 9 FFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSACLELGE 68
Query: 424 QLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIAE 483
L+ H A++ I +K +QV+ R + + E + RL + QFSRDA E W+
Sbjct: 69 SLLQRQHQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDASVAEAWLIA 128
Query: 484 K-LQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQ 535
+ LA+ + +++ ++H+AFE A+ A+R ++ + +RQ
Sbjct: 129 QEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALEKPTTLELKERQ 181
Score = 102 bits (255), Expect = 9e-25
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 1/170 (0%)
Query: 591 DCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLI 650
+WM + + +E +VE L+K H+ + I + A L + L+
Sbjct: 12 MARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSACLELGESLL 71
Query: 651 AADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIAEK-L 709
H A++ I +K +QV+ R + + E + RL + QFSRDA E W+ +
Sbjct: 72 QRQHQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDASVAEAWLIAQEP 131
Query: 710 QLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQ 759
LA+ + +++ ++H+AFE A+ A+R ++ + +RQ
Sbjct: 132 YLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALEKPTTLELKERQ 181
Score = 81.1 bits (200), Expect = 2e-17
Identities = 36/183 (19%), Positives = 64/183 (34%), Gaps = 46/183 (25%)
Query: 298 SRRFQYFKRDADELESWIYEKL-QAASDESYKETTNLQAKIQKHQAFEAEVAAHSNAIVV 356
+ F A +L SW+ + Q + E ++ ++++ ++ HQ AE+ S
Sbjct: 3 TADKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSA 62
Query: 357 LDNTGND---------------------------------------------FYRDCEQA 371
G F RD A
Sbjct: 63 CLELGESLLQRQHQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDASVA 122
Query: 372 ENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHY 431
E W+ A+E +L + + D+VE LIK+HE F+K+ + E+ AL+ +
Sbjct: 123 EAWLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALEKPTTLELKERQI 182
Query: 432 AAK 434
A +
Sbjct: 183 AER 185
Score = 63.0 bits (153), Expect = 3e-11
Identities = 24/94 (25%), Positives = 44/94 (46%)
Query: 1 MEQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTS 60
++Q++ + + E + +L+ + F+R E WL E L S D+G + S
Sbjct: 85 LQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDASVAEAWLIAQEPYLASGDFGHTVDS 144
Query: 61 VQNLQKKHALLEADVASHLDRIESVKAATEQFLE 94
V+ L K+H E AS +R +++ T L+
Sbjct: 145 VEKLIKRHEAFEKSTASWAERFAALEKPTTLELK 178
Score = 61.1 bits (148), Expect = 2e-10
Identities = 36/218 (16%), Positives = 72/218 (33%), Gaps = 45/218 (20%)
Query: 1118 QFMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTL 1177
+F A + SW+ ++++E RD+S+V+ L+ + +A + L
Sbjct: 8 RFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKN-FSACLEL 66
Query: 1178 KDQLVASNHDQTPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQIEDLYLTFAKK 1237
+ L+ H + I ++ V++R +++ AR +RL + E + D
Sbjct: 67 GESLLQRQHQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRD-------- 118
Query: 1238 ASSFNKPQPLSRDMEMSLQDGRSYLEIPMPGNNVFSASSFNSWFENAEEDLTDPVRCNSI 1297
AS +W E L +++
Sbjct: 119 ------------------------------------ASVAEAWLIAQEPYLASGDFGHTV 142
Query: 1298 EEIRALREAHAQFQASLSSAQADFEALAALDQQIKSFN 1335
+ + L + H F+ S +S F AL
Sbjct: 143 DSVEKLIKRHEAFEKSTASWAERFAALEKPTTLELKER 180
Score = 55.3 bits (133), Expect = 1e-08
Identities = 19/114 (16%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Query: 24 EASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTSVQNLQKKHALLEADVASHLDRIE 83
+ + F D+ W+ I Q+ +++ +D++SV+ L K H + A++ +
Sbjct: 2 STADKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFS 61
Query: 84 SVKAATEQFLEHYGKDEDSSEALLKKHEALVSDLEAFGNTILGLREQAQSCRQQ 137
+ E L+ + +SE + +K + ++S + E+ + +
Sbjct: 62 ACLELGESLLQ---RQHQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEV 112
Score = 33.0 bits (75), Expect = 0.52
Identities = 24/166 (14%), Positives = 54/166 (32%), Gaps = 16/166 (9%)
Query: 1279 SWFENAEEDLTDPVRCNSIEEIRALREAHAQFQASLSSAQADFEALAALDQQIKSFNVGP 1338
SW E+ + R + + L + H A + + +F A L + +
Sbjct: 18 SWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSACLELGESLLQRQHQA 77
Query: 1339 NPYTWFTMEALEDTWRNLQKIIKERDIELAKEATRQDENDALRKEFAKHANAFHQWLTET 1398
+ ++ + + + + + R L +F++ A+ WL
Sbjct: 78 SEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVC--------QFSRDASVAEAWLIAQ 129
Query: 1399 RTSMM--------EGTGSLEQQLEAIKRKAAEVRSRRSDLKKIEDL 1436
+ + L ++ EA ++ A R + L+K L
Sbjct: 130 EPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALEKPTTL 175
>1wlx_A Alpha-actinin 4; three-helix bundle, protein binding; NMR {Homo
sapiens}
Length = 129
Score = 123 bits (309), Expect = 8e-33
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 43/162 (26%)
Query: 1220 MQEQFRQIEDLYLTFAKKASSFNKPQPLSRDMEMSLQDGRSYLEIPMPGNNVFSASSFNS 1279
++Q I+ L+L +AK+A+ FN +
Sbjct: 3 TEKQLEAIDQLHLEYAKRAAPFN------------------------------------N 26
Query: 1280 WFENAEEDLTDPVRCNSIEEIRALREAHAQFQASLSSAQADFEALAALDQQIKSFN---- 1335
W E+A EDL D ++IEEI L AH QF+++L A + EA+ A+ ++ +
Sbjct: 27 WMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDADREREAILAIHKEAQRIAESNH 86
Query: 1336 ---VGPNPYTWFTMEALEDTWRNLQKIIKERDIELAKEATRQ 1374
G NPYT T + + W +Q+++ +RD L +E ++Q
Sbjct: 87 IKLSGSNPYTTVTPQIINSKWEKVQQLVPKRDHALLEEQSKQ 128
Score = 34.6 bits (79), Expect = 0.061
Identities = 19/126 (15%), Positives = 42/126 (33%), Gaps = 8/126 (6%)
Query: 895 QARLNEANTLHQFFRDIADE-ESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELAS 953
+ +L + LH + A +W++ + + ++ L H + ++ L
Sbjct: 4 EKQLEAIDQLHLEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPD 63
Query: 954 HQPA-------IQNVQETGEKLMDVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDE 1006
+ Q E + P +++N W +++QL R L E
Sbjct: 64 ADREREAILAIHKEAQRIAESNHIKLSGSNPYTTVTPQIINSKWEKVQQLVPKRDHALLE 123
Query: 1007 SLTYQH 1012
+ Q
Sbjct: 124 EQSKQQ 129
Score = 33.1 bits (75), Expect = 0.23
Identities = 19/118 (16%), Positives = 42/118 (35%), Gaps = 9/118 (7%)
Query: 1000 RGQKLDESLTYQHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSV 1059
+ + +D+ + + + W+ + L T+ ++GL+ HD F++
Sbjct: 6 QLEAIDQL--HLEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPD 63
Query: 1060 H---RDRCADICSAGNKLIEAKNHHADSI----TQRCQQLQLKLDNLMALATKRKTKL 1110
R+ I ++ E+ + T Q + K + + L KR L
Sbjct: 64 ADREREAILAIHKEAQRIAESNHIKLSGSNPYTTVTPQIINSKWEKVQQLVPKRDHAL 121
Score = 31.2 bits (70), Expect = 1.0
Identities = 20/113 (17%), Positives = 38/113 (33%), Gaps = 12/113 (10%)
Query: 1368 AKEATRQDENDALRKEFAKHANAFHQWLTET--------RTSMMEGTGSLEQQLEAIKRK 1419
+ + D L E+AK A F+ W+ +E L + K
Sbjct: 1 GSTEKQLEAIDQLHLEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKST 60
Query: 1420 AAEVRSRRSDL----KKIEDLGAILEEHLILDNRYTEHSTVGLAQQWDQLDQL 1468
+ R + K+ + + L N YT + + +W+++ QL
Sbjct: 61 LPDADREREAILAIHKEAQRIAESNHIKLSGSNPYTTVTPQIINSKWEKVQQL 113
Score = 30.0 bits (67), Expect = 2.3
Identities = 17/120 (14%), Positives = 43/120 (35%), Gaps = 7/120 (5%)
Query: 357 LDNTGNDFYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIG 416
+D ++ + NWM + L + + +E LI H+ F + + +
Sbjct: 10 IDQLHLEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDADRERE 69
Query: 417 ALQTLADQLIAADHYAAKPIDDK-------RKQVLDRWRLLKEALIEKRSRLGESQTLQQ 469
A+ + + + + + +W +++ + ++ L E Q+ QQ
Sbjct: 70 AILAIHKEAQRIAESNHIKLSGSNPYTTVTPQIINSKWEKVQQLVPKRDHALLEEQSKQQ 129
Score = 28.9 bits (64), Expect = 6.5
Identities = 15/117 (12%), Positives = 42/117 (35%), Gaps = 8/117 (6%)
Query: 1116 YLQFMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEG----- 1170
+L++ +A +W+ ++ + ++ L++ + F + L + E
Sbjct: 14 HLEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDADREREAILA 73
Query: 1171 -IQNITTLKDQLVASNHDQTPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQ 1226
+ + + P + ++W+K+ R L ++EQ +Q
Sbjct: 74 IHKEAQRIAESNHIKLSGSNPYTTVTPQIINSKWEKVQQLVPKRDHAL--LEEQSKQ 128
Score = 28.9 bits (64), Expect = 6.9
Identities = 16/105 (15%), Positives = 38/105 (36%), Gaps = 7/105 (6%)
Query: 596 ENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHY 655
NWM + L + + +E LI H+ F + + + A+ + +
Sbjct: 25 NNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDADREREAILAIHKEAQRIAES 84
Query: 656 AAKPIDDK-------RKQVLDRWRLLKEALIEKRSRLGESQTLQQ 693
+ + + +W +++ + ++ L E Q+ QQ
Sbjct: 85 NHIKLSGSNPYTTVTPQIINSKWEKVQQLVPKRDHALLEEQSKQQ 129
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil,
contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1
a.7.1.1
Length = 250
Score = 125 bits (316), Expect = 3e-32
Identities = 70/269 (26%), Positives = 123/269 (45%), Gaps = 45/269 (16%)
Query: 1118 QFMWKADVVESWIADKETHVKSEEY-GRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITT 1176
+F KA E+W KE + ++Y L+ V+ LL K E F++ L A + + ++ I
Sbjct: 18 KFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQ-DRVEQIAA 76
Query: 1177 LKDQLVASNHDQTPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQIEDLYLTFAK 1236
+ +L ++ + R + +W +L + R++ L RM++ I+ L+L FAK
Sbjct: 77 IAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAK 136
Query: 1237 KASSFNKPQPLSRDMEMSLQDGRSYLEIPMPGNNVFSASSFNSWFENAEEDLTDPVRCNS 1296
+ A+ FN+W E A EDL D +S
Sbjct: 137 R------------------------------------AAPFNNWMEGAMEDLQDMFIVHS 160
Query: 1297 IEEIRALREAHAQFQASLSSAQADFEALAALDQQIKSF-------NVGPNPYTWFTMEAL 1349
IEEI++L AH QF+A+L A + +++ A+ +++ NPY+ TM+ L
Sbjct: 161 IEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDEL 220
Query: 1350 EDTWRNLQKIIKERDIELAKEATRQDEND 1378
W +++++ RD L +E RQ N+
Sbjct: 221 RTKWDKVKQLVPIRDQSLQEELARQHANE 249
Score = 117 bits (293), Expect = 3e-29
Identities = 49/229 (21%), Positives = 93/229 (40%), Gaps = 16/229 (6%)
Query: 801 YIAAVKDLDFWLGEVESLLTSED-SGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQA 859
+ + W E +L +D L V+ L++KH+ E+D+ AH DR++ + A
Sbjct: 19 FRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIA 78
Query: 860 DSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQ--------FFRDI 911
L + DA ++ ++ Q I ++++R+ L R+ L L + F +
Sbjct: 79 QELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRA 138
Query: 912 ADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMDV 971
A +W++ + + +Q+L H++ +A L Q++ ++ V
Sbjct: 139 APFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKV 198
Query: 972 -------SNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESLTYQHF 1013
+ P + L W ++KQL R Q L E L QH
Sbjct: 199 IQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHA 247
Score = 108 bits (270), Expect = 4e-26
Identities = 44/243 (18%), Positives = 88/243 (36%), Gaps = 18/243 (7%)
Query: 893 HRQARLNEANTLHQFFRDIADEESWIKEK-KLLVGSDDYGRDLTGVQNLKKKHKRLEAEL 951
R RL +F + + E+W K ++L+ D LT V+ L +KH+ E++L
Sbjct: 7 RRLERLEHL--AEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDL 64
Query: 952 ASHQPAIQNVQETGEKLMDVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESLT-- 1009
A+HQ ++ + ++L ++ + R + + W L L R + L+
Sbjct: 65 AAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLL 124
Query: 1010 ------YQHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDR 1063
+ F + W+ + L ++ +Q L+ H+ F+
Sbjct: 125 ETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGE 184
Query: 1064 CADICSAGNKLIEAKNHHADS-------ITQRCQQLQLKLDNLMALATKRKTKLMDNSAY 1116
I + N++ + + T +L+ K D + L R L + A
Sbjct: 185 RQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELAR 244
Query: 1117 LQF 1119
Sbjct: 245 QHA 247
Score = 106 bits (266), Expect = 1e-25
Identities = 46/229 (20%), Positives = 96/229 (41%), Gaps = 15/229 (6%)
Query: 364 FYRDCEQAENWMSAREAFLNAEEVDSKT-DNVEALIKKHEDFDKAINAHEEKIGALQTLA 422
F + E W +E L ++ +S + V AL++KHE F+ + AH++++ + +A
Sbjct: 19 FRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIA 78
Query: 423 DQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQ--------FSRDA 474
+L D++ A ++D+ +++ D+W L ++R L + L + F++ A
Sbjct: 79 QELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRA 138
Query: 475 DEMENWIAEKL-QLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDK 533
NW+ + L IQS H+ F+A L QS++A+ +
Sbjct: 139 APFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKV 198
Query: 534 RQCVGSEEA-----VQARLASIADQWEFLTQKTTEKSLKLKEANKQRTY 577
Q + + + +W+ + Q + L+E ++
Sbjct: 199 IQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHA 247
Score = 103 bits (258), Expect = 1e-24
Identities = 45/227 (19%), Positives = 95/227 (41%), Gaps = 15/227 (6%)
Query: 590 KDCEQAENWMSAREAFLNAEEVDSKT-DNVEALIKKHEDFDKAINAHEEKIGALQTLADQ 648
+ E W +E L ++ +S + V AL++KHE F+ + AH++++ + +A +
Sbjct: 21 QKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQE 80
Query: 649 LIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQ--------FSRDADE 700
L D++ A ++D+ +++ D+W L ++R L + L + F++ A
Sbjct: 81 LNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAP 140
Query: 701 MENWIAEKL-QLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQ 759
NW+ + L IQS H+ F+A L QS++A+ + Q
Sbjct: 141 FNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQ 200
Query: 760 CVGSEEA-----VQARLASIADQWEFLTQKTTEKSLKLKEANKQRTY 801
+ + + +W+ + Q + L+E ++
Sbjct: 201 SYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHA 247
Score = 102 bits (256), Expect = 3e-24
Identities = 44/237 (18%), Positives = 86/237 (36%), Gaps = 19/237 (8%)
Query: 689 QTLQQFSRDADEMENWIAEKLQLATEESY--KDPANIQSKHQKHQAFEAELAANADRIQS 746
++F + A E W K Q+ ++ Y +++ +KH+AFE++LAA+ DR++
Sbjct: 14 HLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQ 73
Query: 747 VLAMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQ-------- 798
+ A+ Q L + V R I DQW+ L T ++ L+ K
Sbjct: 74 IAAIAQELNELDYH--DAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLH 131
Query: 799 RTYIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQ 858
+ + W+ L + +Q+LI H+ +A + D + +
Sbjct: 132 LEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAI 191
Query: 859 ADSLIDSGQFDASS-------IQEKRQSINERYERIKNLAAHRQARLNEANTLHQFF 908
+ + Q + +++++K L R L E
Sbjct: 192 QNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHAN 248
Score = 94.7 bits (235), Expect = 2e-21
Identities = 47/239 (19%), Positives = 92/239 (38%), Gaps = 14/239 (5%)
Query: 465 QTLQQFSRDADEMENWIAEKLQLATEESY--KDPANIQSKHQKHQAFEAELAANADRIQS 522
++F + A E W K Q+ ++ Y +++ +KH+AFE++LAA+ DR++
Sbjct: 14 HLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQ 73
Query: 523 VLAMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVK 582
+ A+ Q L + V R I DQW+ L T ++ L+ K I
Sbjct: 74 IAAIAQELNELDYH--DAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETI---D 128
Query: 583 DLPYFSKKDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGAL 642
L K NWM L + + +++LI HE F + + + ++
Sbjct: 129 QLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSI 188
Query: 643 QTLADQLIA-------ADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQF 694
+ +++ + ++ +W +K+ + + L E Q
Sbjct: 189 MAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHA 247
Score = 71.6 bits (175), Expect = 1e-13
Identities = 48/225 (21%), Positives = 90/225 (40%), Gaps = 13/225 (5%)
Query: 1274 ASSFNSWFENAEEDLTDP-VRCNSIEEIRALREAHAQFQASLSSAQADFEALAALDQQIK 1332
AS+ +W E+ L S+ E+RAL H F++ L++ Q E +AA+ Q++
Sbjct: 23 ASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELN 82
Query: 1333 SFNVGPNPYTWFTMEALEDTWRNLQKIIKERDIELAKEATRQDENDALRKEFAKHANAFH 1392
+ + + D W L + ++R L + + D L EFAK A F+
Sbjct: 83 ELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFN 142
Query: 1393 QWLTETRTSM--------MEGTGSLEQQLEAIKRKAAEVRSRRSDL----KKIEDLGAIL 1440
W+ + +E SL E K E R + ++E +
Sbjct: 143 NWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSY 202
Query: 1441 EEHLILDNRYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNQ 1485
+ N Y+ + L +WD++ QL +L++++ ++
Sbjct: 203 NIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHA 247
Score = 52.4 bits (125), Expect = 4e-07
Identities = 17/126 (13%), Positives = 38/126 (30%), Gaps = 8/126 (6%)
Query: 1 MEQIVHLWESLATATEKKGNKLQEASQQQG--------FNRTIEDIELWLSEIEGQLMSE 52
++I W+ L T T+K+ L+ + F + W+ L
Sbjct: 96 CQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDM 155
Query: 53 DYGKDLTSVQNLQKKHALLEADVASHLDRIESVKAATEQFLEHYGKDEDSSEALLKKHEA 112
+ +Q+L H +A + +S+ A + + +
Sbjct: 156 FIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTV 215
Query: 113 LVSDLE 118
+ +L
Sbjct: 216 TMDELR 221
Score = 50.4 bits (120), Expect = 2e-06
Identities = 33/252 (13%), Positives = 82/252 (32%), Gaps = 20/252 (7%)
Query: 229 QERREQVLNRYADFKSEARSKREKLEDITVKEVKILETANDIQERREQVLNRYADFKSEA 288
R E++ + F+ +A + ++ + + E R L ++ F+S+
Sbjct: 6 IRRLERLEHLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRAL-LRKHEAFESDL 64
Query: 289 RSKREKLEDSRRFQYFKRDADELESWIY---EKLQAASDESYKETTNLQAKIQKHQAFEA 345
+ ++ R + A EL Y + + + L QK +
Sbjct: 65 AAHQD------RVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRRE--- 115
Query: 346 EVAAHSNAIVVLDNTGNDFYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFD 405
+ + +D +F + NWM L + + +++LI HE F
Sbjct: 116 ALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFK 175
Query: 406 KAINAHEEKIGALQTLADQLIA-------ADHYAAKPIDDKRKQVLDRWRLLKEALIEKR 458
+ + + ++ + +++ + ++ +W +K+ + +
Sbjct: 176 ATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRD 235
Query: 459 SRLGESQTLQQF 470
L E Q
Sbjct: 236 QSLQEELARQHA 247
Score = 45.4 bits (107), Expect = 6e-05
Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 6/118 (5%)
Query: 21 KLQEASQQQGFNRTIEDIELWLSEIEGQLMSEDY-GKDLTSVQNLQKKHALLEADVASHL 79
+L+ +++ F + E W E L+ +DY LT V+ L +KH E+D+A+H
Sbjct: 11 RLEHLAEK--FRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQ 68
Query: 80 DRIESVKAATEQFLEHYGKDEDSSEALLKKHEALVSDLEAFGNTILGLREQAQSCRQQ 137
DR+E + A ++ E D + + + + + + G RE + +
Sbjct: 69 DRVEQIAAIAQELNE---LDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKL 123
Score = 35.0 bits (80), Expect = 0.12
Identities = 23/181 (12%), Positives = 62/181 (34%), Gaps = 37/181 (20%)
Query: 225 ANDIQERREQVLNRYADFKSEARSKREKLEDITVKEVKILETANDIQERREQVLNRYADF 284
A ++ +R +++ +++ + + +RE LE + + I + +
Sbjct: 89 AVNVNDRCQKICDQWDRLGTLTQKRREALER-------MEKLLETIDQLHLE-------- 133
Query: 285 KSEARSKREKLEDSRRFQYFKRDADELESWIYEKLQAASDESY-KETTNLQAKIQKHQAF 343
F + A +W+ ++ D +Q+ I H+ F
Sbjct: 134 -------------------FAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQF 174
Query: 344 EAEVAAHSNAIVVLDNTGNDFYRDCEQAENWMSAREAFLN--AEEVDSKTDNVEALIKKH 401
+A + + N+ + + +S+ + +E+ +K D V+ L+
Sbjct: 175 KATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIR 234
Query: 402 E 402
+
Sbjct: 235 D 235
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix
bundle, alpha helix repeat, helical linker, actin
capping; 2.80A {Homo sapiens} PDB: 1owa_A
Length = 161
Score = 107 bits (268), Expect = 7e-27
Identities = 48/161 (29%), Positives = 86/161 (53%), Gaps = 6/161 (3%)
Query: 411 HEEKIGALQTLADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQF 470
K +++ +++ A+ I ++R++VL R++ KE + E+ +L +S LQ F
Sbjct: 6 QFPKETVVESSGPKVLET----AEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVF 61
Query: 471 SRDADEMENWIAEKLQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNL 530
RDAD++ WI EK+ + T++SY+DP NIQ K+QKHQ+ EAE+ + + + +
Sbjct: 62 KRDADDLGKWIMEKVNILTDKSYEDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREER 121
Query: 531 IDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEA 571
+ E +A + + W+ L + T EK +L A
Sbjct: 122 FTMGHS--AHEETKAHIEELRHLWDLLLELTLEKGDQLLRA 160
Score = 107 bits (268), Expect = 7e-27
Identities = 48/161 (29%), Positives = 86/161 (53%), Gaps = 6/161 (3%)
Query: 635 HEEKIGALQTLADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQF 694
K +++ +++ A+ I ++R++VL R++ KE + E+ +L +S LQ F
Sbjct: 6 QFPKETVVESSGPKVLET----AEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVF 61
Query: 695 SRDADEMENWIAEKLQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNL 754
RDAD++ WI EK+ + T++SY+DP NIQ K+QKHQ+ EAE+ + + + +
Sbjct: 62 KRDADDLGKWIMEKVNILTDKSYEDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREER 121
Query: 755 IDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEA 795
+ E +A + + W+ L + T EK +L A
Sbjct: 122 FTMGHS--AHEETKAHIEELRHLWDLLLELTLEKGDQLLRA 160
Score = 106 bits (267), Expect = 9e-27
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 5/161 (3%)
Query: 848 HDDRIKDMNGQADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQF 907
+ + +++ A IQE+RQ + RY+ K A R +L ++ L F
Sbjct: 6 QFPKETVVESSGPKVLE----TAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVF 61
Query: 908 FRDIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEK 967
RD D WI EK ++ Y D T +Q +KH+ LEAE+ + + +++T E+
Sbjct: 62 KRDADDLGKWIMEKVNILTDKSY-EDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREE 120
Query: 968 LMDVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESL 1008
+ + E + ++ L W L +L +G +L +L
Sbjct: 121 RFTMGHSAHEETKAHIEELRHLWDLLLELTLEKGDQLLRAL 161
Score = 102 bits (256), Expect = 3e-25
Identities = 34/159 (21%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 954 HQPAIQNVQETGEKLMDVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESLTYQHF 1013
P V+ +G K+++ + EI++R + + + K+ A RGQKL++S Q F
Sbjct: 6 QFPKETVVESSGPKVLETAE----EIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVF 61
Query: 1014 LAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNK 1073
++ WI EK +L+ + Y D +QG +KH + E + +++ +
Sbjct: 62 KRDADDLGKWIMEKVNILTDKSYEDP-TNIQGKYQKHQSLEAEVQTKSRLMSELEKTREE 120
Query: 1074 LIEAKNHHADSITQRCQQLQLKLDNLMALATKRKTKLMD 1112
+ + ++L+ D L+ L ++ +L+
Sbjct: 121 RFTMGHSAHEETKAHIEELRHLWDLLLELTLEKGDQLLR 159
Score = 92.3 bits (229), Expect = 1e-21
Identities = 55/136 (40%), Positives = 75/136 (55%)
Query: 249 KREKLEDITVKEVKILETANDIQERREQVLNRYADFKSEARSKREKLEDSRRFQYFKRDA 308
+ K + K+LETA +IQERR++VL RY FK + +KLEDS Q FKRDA
Sbjct: 6 QFPKETVVESSGPKVLETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDA 65
Query: 309 DELESWIYEKLQAASDESYKETTNLQAKIQKHQAFEAEVAAHSNAIVVLDNTGNDFYRDC 368
D+L WI EK+ +D+SY++ TN+Q K QKHQ+ EAEV S + L+ T + +
Sbjct: 66 DDLGKWIMEKVNILTDKSYEDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMG 125
Query: 369 EQAENWMSAREAFLNA 384
A A L
Sbjct: 126 HSAHEETKAHIEELRH 141
Score = 75.7 bits (186), Expect = 8e-16
Identities = 24/137 (17%), Positives = 60/137 (43%), Gaps = 1/137 (0%)
Query: 765 EAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLDFWLGEVESLLTSEDS 824
E +Q R + +++ ++ E+ KL+++ + + DL W+ E ++LT +
Sbjct: 25 EEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEKVNILTDKS- 83
Query: 825 GKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDSGQFDASSIQEKRQSINERY 884
+D ++Q +KHQ +EA++Q + ++ + G + + + +
Sbjct: 84 YEDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMGHSAHEETKAHIEELRHLW 143
Query: 885 ERIKNLAAHRQARLNEA 901
+ + L + +L A
Sbjct: 144 DLLLELTLEKGDQLLRA 160
Score = 69.6 bits (170), Expect = 1e-13
Identities = 28/158 (17%), Positives = 61/158 (38%), Gaps = 6/158 (3%)
Query: 1060 HRDRCADICSAGNKLIEAKNHHADSITQRCQQLQLKLDNLMALATKRKTKLMDNSAYLQF 1119
+ + S+G K++E A+ I +R Q++ + + +R KL D+ F
Sbjct: 6 QFPKETVVESSGPKVLE----TAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVF 61
Query: 1120 MWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTLKD 1179
AD + WI +K + + Y D + +Q K ++ +A + + + ++
Sbjct: 62 KRDADDLGKWIMEKVNILTDKSY-EDPTNIQGKYQKHQSLEAEVQTKS-RLMSELEKTRE 119
Query: 1180 QLVASNHDQTPAIVKRHGDVIARWQKLLGDSNARKQRL 1217
+ H ++ W LL + + +L
Sbjct: 120 ERFTMGHSAHEETKAHIEELRHLWDLLLELTLEKGDQL 157
Score = 64.2 bits (156), Expect = 7e-12
Identities = 24/148 (16%), Positives = 60/148 (40%), Gaps = 12/148 (8%)
Query: 541 EAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLPYFSKKDCEQAENWMS 600
E +Q R + +++ ++ E+ KL+++ + + K+D + W+
Sbjct: 25 EEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVF-----------KRDADDLGKWIM 73
Query: 601 AREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHYAAKPI 660
+ L + + T N++ +KH+ + + + L+ ++ H A +
Sbjct: 74 EKVNILTDKSYEDPT-NIQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMGHSAHEET 132
Query: 661 DDKRKQVLDRWRLLKEALIEKRSRLGES 688
+++ W LL E +EK +L +
Sbjct: 133 KAHIEELRHLWDLLLELTLEKGDQLLRA 160
Score = 61.1 bits (148), Expect = 1e-10
Identities = 19/101 (18%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Query: 364 FYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLAD 423
F RD + W+ + L + + T N++ +KH+ + + + L+ +
Sbjct: 61 FKRDADDLGKWIMEKVNILTDKSYEDPT-NIQGKYQKHQSLEAEVQTKSRLMSELEKTRE 119
Query: 424 QLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGES 464
+ H A + +++ W LL E +EK +L +
Sbjct: 120 ERFTMGHSAHEETKAHIEELRHLWDLLLELTLEKGDQLLRA 160
Score = 54.9 bits (132), Expect = 1e-08
Identities = 23/109 (21%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 1 MEQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTS 60
++++ ++S ++G KL+++ Q F R +D+ W+ E L + Y +D T+
Sbjct: 31 RQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEKVNILTDKSY-EDPTN 89
Query: 61 VQNLQKKHALLEADVASHLDRIESVKAATEQFLEHYGKDEDSSEALLKK 109
+Q +KH LEA+V + + ++ E+ + ++A +++
Sbjct: 90 IQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMGHSAHEETKAHIEE 138
Score = 31.8 bits (72), Expect = 0.93
Identities = 20/137 (14%), Positives = 52/137 (37%), Gaps = 12/137 (8%)
Query: 1346 MEALEDTWRNLQKIIKERDIELAKEATRQDENDALRKEFAKHANAFHQWLTETRTSMMEG 1405
+ + +++ ++ + ER +L E+ + F + A+ +W+ E + +
Sbjct: 31 RQEVLTRYQSFKERVAERGQKL--------EDSYHLQVFKRDADDLGKWIMEKVNILTDK 82
Query: 1406 TGSLEQQLEAIKRK----AAEVRSRRSDLKKIEDLGAILEEHLILDNRYTEHSTVGLAQQ 1461
+ ++ +K AEV+++ + ++E + T+ L
Sbjct: 83 SYEDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMGHSAHEETKAHIEELRHL 142
Query: 1462 WDQLDQLGMRMQHNLEQ 1478
WD L +L + L +
Sbjct: 143 WDLLLELTLEKGDQLLR 159
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP:
a.7.1.1
Length = 107
Score = 104 bits (261), Expect = 1e-26
Identities = 73/100 (73%), Positives = 86/100 (86%)
Query: 364 FYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLAD 423
+ RDCE AE+WMSAREAFLNA++ + NVEALIKKHEDFDKAIN HE+KI ALQT+AD
Sbjct: 8 YMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQTVAD 67
Query: 424 QLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGE 463
QLIA +HYA+ +D+KRKQVL+RWR LKE LIEKRSRLG+
Sbjct: 68 QLIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRLGD 107
Score = 99.5 bits (248), Expect = 7e-25
Identities = 72/97 (74%), Positives = 84/97 (86%)
Query: 591 DCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLI 650
DCE AE+WMSAREAFLNA++ + NVEALIKKHEDFDKAIN HE+KI ALQT+ADQLI
Sbjct: 11 DCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQTVADQLI 70
Query: 651 AADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGE 687
A +HYA+ +D+KRKQVL+RWR LKE LIEKRSRLG+
Sbjct: 71 AQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRLGD 107
Score = 91.0 bits (226), Expect = 7e-22
Identities = 22/107 (20%), Positives = 59/107 (55%)
Query: 1006 ESLTYQHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCA 1065
++L Q ++ E E+W+S ++ L+ +D + V+ L+KKH+ F+ + H + A
Sbjct: 1 QNLDLQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIA 60
Query: 1066 DICSAGNKLIEAKNHHADSITQRCQQLQLKLDNLMALATKRKTKLMD 1112
+ + ++LI ++ ++ + ++ +Q+ + +L +++++L D
Sbjct: 61 ALQTVADQLIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRLGD 107
Score = 83.7 bits (207), Expect = 2e-19
Identities = 22/103 (21%), Positives = 49/103 (47%)
Query: 904 LHQFFRDIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQE 963
L + RD ESW+ ++ + +DD V+ L KKH+ + + H+ I +Q
Sbjct: 5 LQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQT 64
Query: 964 TGEKLMDVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDE 1006
++L+ ++ ++++ K + + W LK+ + +L +
Sbjct: 65 VADQLIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRLGD 107
Score = 81.0 bits (200), Expect = 3e-18
Identities = 26/102 (25%), Positives = 53/102 (51%)
Query: 799 RTYIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQ 858
+ Y+ + + W+ E+ L ++D +V+ LIKKH+ + I H+ +I +
Sbjct: 6 QLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQTV 65
Query: 859 ADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLNE 900
AD LI + ++ + EKR+ + ER+ +K +++RL +
Sbjct: 66 ADQLIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRLGD 107
Score = 67.9 bits (166), Expect = 1e-13
Identities = 20/109 (18%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 463 ESQTLQQFSRDADEMENWIAEK-LQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQ 521
++ LQ + RD + E+W++ + L ++ N+++ +KH+ F+ + + +I
Sbjct: 1 QNLDLQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIA 60
Query: 522 SVLAMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKE 570
++ + LI + + V + + ++W L + EK +L +
Sbjct: 61 ALQTVADQLIAQNHY--ASNLVDEKRKQVLERWRHLKEGLIEKRSRLGD 107
Score = 67.9 bits (166), Expect = 1e-13
Identities = 20/109 (18%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 687 ESQTLQQFSRDADEMENWIAEK-LQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQ 745
++ LQ + RD + E+W++ + L ++ N+++ +KH+ F+ + + +I
Sbjct: 1 QNLDLQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIA 60
Query: 746 SVLAMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKE 794
++ + LI + + V + + ++W L + EK +L +
Sbjct: 61 ALQTVADQLIAQNHY--ASNLVDEKRKQVLERWRHLKEGLIEKRSRLGD 107
Score = 66.8 bits (163), Expect = 2e-13
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 1118 QFMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTL 1177
+M ++ ESW++ +E + +++ V+ L+ K E FD ++ E + I + T+
Sbjct: 7 LYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHE-QKIAALQTV 65
Query: 1178 KDQLVASNHDQTPAIVKRHGDVIARWQKLLGDSNARKQRL 1217
DQL+A NH + + ++ V+ RW+ L ++ RL
Sbjct: 66 ADQLIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRL 105
Score = 58.3 bits (141), Expect = 2e-10
Identities = 22/100 (22%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Query: 24 EASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTSVQNLQKKHALLEADVASHLDRIE 83
+ Q + R E E W+S E L ++D +V+ L KKH + + H +I
Sbjct: 1 QNLDLQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIA 60
Query: 84 SVKAATEQFLE--HYGKDE--DSSEALLKKHEALVSDLEA 119
+++ +Q + HY + + + +L++ L L
Sbjct: 61 ALQTVADQLIAQNHYASNLVDEKRKQVLERWRHLKEGLIE 100
Score = 43.7 bits (103), Expect = 3e-05
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 298 SRRFQYFKRDADELESWIYEK-LQAASDESYKETTNLQAKIQKHQAFEAEVAAHSNAIVV 356
+ Q + RD + ESW+ + +D+ N++A I+KH+ F+ + H I
Sbjct: 2 NLDLQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAA 61
Query: 357 LDNTGND 363
L +
Sbjct: 62 LQTVADQ 68
Score = 29.8 bits (67), Expect = 2.0
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 233 EQVLNRYADFKSEARSKREKLEDITVKEVKILET----ANDIQERREQVLNRYADFKSEA 288
E ++ ++ DF +K+ + +++ +N + E+R+QVL R+ K
Sbjct: 39 EALIKKHEDFDKAINGHEQKIAALQTVADQLIAQNHYASNLVDEKRKQVLERWRHLKEGL 98
Query: 289 RSKREKLED 297
KR +L D
Sbjct: 99 IEKRSRLGD 107
Score = 28.6 bits (64), Expect = 5.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 225 ANDIQERREQVLNRYADFKSEARSKREKLED 255
+N + E+R+QVL R+ K KR +L D
Sbjct: 77 SNLVDEKRKQVLERWRHLKEGLIEKRSRLGD 107
Score = 28.3 bits (63), Expect = 6.8
Identities = 17/90 (18%), Positives = 36/90 (40%)
Query: 1274 ASSFNSWFENAEEDLTDPVRCNSIEEIRALREAHAQFQASLSSAQADFEALAALDQQIKS 1333
SW E L N+ + AL + H F +++ + AL + Q+ +
Sbjct: 12 CELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQTVADQLIA 71
Query: 1334 FNVGPNPYTWFTMEALEDTWRNLQKIIKER 1363
N + + + + WR+L++ + E+
Sbjct: 72 QNHYASNLVDEKRKQVLERWRHLKEGLIEK 101
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical
bundle, actin cappin binding, alternative splicing,
calcium; 2.30A {Homo sapiens}
Length = 149
Score = 102 bits (256), Expect = 2e-25
Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Query: 869 DASSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQFFRDIADEESWIKEKKLLVGSD 928
A IQE+RQ + +RY R K L+ R+ +L ++ F RD + E WI+EK + +
Sbjct: 13 TAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQIASDE 72
Query: 929 DYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMDVSNLGVPEIEQRLKLLNQ 988
+Y D T +Q +KH+ EAE+ ++ AI + ETG ++ + I RL L++
Sbjct: 73 NYK-DPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETIRTRLMELHR 131
Query: 989 AWSELKQLAANRGQKLDE 1006
W L + +G KL +
Sbjct: 132 QWELLLEKMREKGIKLLQ 149
Score = 100 bits (250), Expect = 1e-24
Identities = 62/155 (40%), Positives = 94/155 (60%), Gaps = 6/155 (3%)
Query: 416 GALQTLADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDAD 475
G++ +++ A+ I ++R+QVLDR+ KE +R +L +S Q F RDA+
Sbjct: 1 GSMDPSGVKVLET----AEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAE 56
Query: 476 EMENWIAEKLQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQ 535
E+E WI EKLQ+A++E+YKDP N+Q K QKHQAFEAE+ AN+ I + G +I +
Sbjct: 57 ELEKWIQEKLQIASDENYKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGH 116
Query: 536 CVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKE 570
+ E ++ RL + QWE L +K EK +KL +
Sbjct: 117 F--ASETIRTRLMELHRQWELLLEKMREKGIKLLQ 149
Score = 100 bits (250), Expect = 1e-24
Identities = 62/155 (40%), Positives = 94/155 (60%), Gaps = 6/155 (3%)
Query: 640 GALQTLADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDAD 699
G++ +++ A+ I ++R+QVLDR+ KE +R +L +S Q F RDA+
Sbjct: 1 GSMDPSGVKVLET----AEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAE 56
Query: 700 EMENWIAEKLQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQ 759
E+E WI EKLQ+A++E+YKDP N+Q K QKHQAFEAE+ AN+ I + G +I +
Sbjct: 57 ELEKWIQEKLQIASDENYKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGH 116
Query: 760 CVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKE 794
+ E ++ RL + QWE L +K EK +KL +
Sbjct: 117 F--ASETIRTRLMELHRQWELLLEKMREKGIKLLQ 149
Score = 99.2 bits (247), Expect = 3e-24
Identities = 42/150 (28%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Query: 961 VQETGEKLMDVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESLTYQHFLAKVEEE 1020
+ +G K+++ + +I++R + + + K+L+ R QKL++S +Q F EE
Sbjct: 3 MDPSGVKVLETA----EDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEEL 58
Query: 1021 EAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEAKNH 1080
E WI EK Q+ S E+Y D +QG L+KH AFE + + + GN +I +
Sbjct: 59 EKWIQEKLQIASDENYKDP-TNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHF 117
Query: 1081 HADSITQRCQQLQLKLDNLMALATKRKTKL 1110
+++I R +L + + L+ ++ KL
Sbjct: 118 ASETIRTRLMELHRQWELLLEKMREKGIKL 147
Score = 89.5 bits (222), Expect = 9e-21
Identities = 74/120 (61%), Positives = 89/120 (74%)
Query: 259 KEVKILETANDIQERREQVLNRYADFKSEARSKREKLEDSRRFQYFKRDADELESWIYEK 318
VK+LETA DIQERR+QVL+RY FK + +R+KLEDS RFQ+F+RDA+ELE WI EK
Sbjct: 6 SGVKVLETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEK 65
Query: 319 LQAASDESYKETTNLQAKIQKHQAFEAEVAAHSNAIVVLDNTGNDFYRDCEQAENWMSAR 378
LQ ASDE+YK+ TNLQ K+QKHQAFEAEV A+S AIV LD TGN + A + R
Sbjct: 66 LQIASDENYKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETIRTR 125
Score = 77.6 bits (191), Expect = 1e-16
Identities = 28/136 (20%), Positives = 71/136 (52%), Gaps = 1/136 (0%)
Query: 765 EAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLDFWLGEVESLLTSEDS 824
E +Q R + D++ + +T + KL+++ + + + ++L+ W+ E + + E+
Sbjct: 15 EDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQIASDEN- 73
Query: 825 GKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDSGQFDASSIQEKRQSINERY 884
KD ++Q ++KHQ EA++QA+ I ++ + +I G F + +I+ + ++ ++
Sbjct: 74 YKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETIRTRLMELHRQW 133
Query: 885 ERIKNLAAHRQARLNE 900
E + + +L +
Sbjct: 134 ELLLEKMREKGIKLLQ 149
Score = 68.0 bits (166), Expect = 2e-13
Identities = 30/147 (20%), Positives = 70/147 (47%), Gaps = 12/147 (8%)
Query: 541 EAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLPYFSKKDCEQAENWMS 600
E +Q R + D++ + +T + KL+++ + + + ++D E+ E W+
Sbjct: 15 EDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFF-----------QRDAEELEKWIQ 63
Query: 601 AREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHYAAKPI 660
+ + E N++ ++KH+ F+ + A+ I L + +I+ H+A++ I
Sbjct: 64 EKLQIASDENYKD-PTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETI 122
Query: 661 DDKRKQVLDRWRLLKEALIEKRSRLGE 687
+ ++ +W LL E + EK +L +
Sbjct: 123 RTRLMELHRQWELLLEKMREKGIKLLQ 149
Score = 66.1 bits (161), Expect = 1e-12
Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Query: 1082 ADSITQRCQQLQLKLDNLMALATKRKTKLMDNSAYLQFMWKADVVESWIADKETHVKSEE 1141
A+ I +R QQ+ + L+T R+ KL D+ + F A+ +E WI +K E
Sbjct: 14 AEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQIASDEN 73
Query: 1142 YGRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTLKDQLVASNHDQTPAIVKRHGDVIA 1201
Y D + +Q L K + F+A + A I + + +++ H + I R ++
Sbjct: 74 YK-DPTNLQGKLQKHQAFEAEVQANS-GAIVKLDETGNLMISEGHFASETIRTRLMELHR 131
Query: 1202 RWQKLLGDSNARKQRLLR 1219
+W+ LL + +LL+
Sbjct: 132 QWELLLEKMREKGIKLLQ 149
Score = 64.1 bits (156), Expect = 6e-12
Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 364 FYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLAD 423
F RD E+ E W+ + + E N++ ++KH+ F+ + A+ I L +
Sbjct: 51 FQRDAEELEKWIQEKLQIASDENYKD-PTNLQGKLQKHQAFEAEVQANSGAIVKLDETGN 109
Query: 424 QLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGE 463
+I+ H+A++ I + ++ +W LL E + EK +L +
Sbjct: 110 LMISEGHFASETIRTRLMELHRQWELLLEKMREKGIKLLQ 149
Score = 53.7 bits (129), Expect = 2e-08
Identities = 22/102 (21%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 1 MEQIVHLWESLATATEKKGNKLQEASQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDLTS 60
+Q++ + + + KL+++ + Q F R E++E W+ E E+Y D T+
Sbjct: 21 RQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQIASDENYK-DPTN 79
Query: 61 VQNLQKKHALLEADVASHLDRIESVKAATEQFLE--HYGKDE 100
+Q +KH EA+V ++ I + + H+ +
Sbjct: 80 LQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASET 121
Score = 32.2 bits (73), Expect = 0.61
Identities = 21/138 (15%), Positives = 49/138 (35%), Gaps = 12/138 (8%)
Query: 1345 TMEALEDTWRNLQKIIKERDIELAKEATRQDENDALRKEFAKHANAFHQWLTETRTSMME 1404
+ + D + +++ R +L E+ + F + A +W+ E +
Sbjct: 20 RRQQVLDRYHRFKELSTLRRQKL--------EDSYRFQFFQRDAEELEKWIQEKLQIASD 71
Query: 1405 GTGSLEQQLEAIKRK----AAEVRSRRSDLKKIEDLGAILEEHLILDNRYTEHSTVGLAQ 1460
L+ +K AEV++ + K+++ G ++ + + L +
Sbjct: 72 ENYKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETIRTRLMELHR 131
Query: 1461 QWDQLDQLGMRMQHNLEQ 1478
QW+ L + L Q
Sbjct: 132 QWELLLEKMREKGIKLLQ 149
>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural
protein; 1.70A {Rattus norvegicus}
Length = 73
Score = 97.0 bits (242), Expect = 2e-24
Identities = 54/70 (77%), Positives = 62/70 (88%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEA 204
TGKE V+ALYDY EKSPREV+MKK D+LTLLNS NKDWWKVEVNDRQGFVPAAYVKK++
Sbjct: 3 TGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDP 62
Query: 205 GLTASQQNLA 214
+AS++NL
Sbjct: 63 AQSASRENLG 72
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural
protein; 1.75A {Gallus gallus}
Length = 80
Score = 95.5 bits (238), Expect = 9e-24
Identities = 53/70 (75%), Positives = 61/70 (87%)
Query: 146 GKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEAG 205
GKE V+ALYDY EKSPREV+MKK D+LTLLNS NKDWWKVEVNDRQGFVPAAYVKK++
Sbjct: 1 GKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDPA 60
Query: 206 LTASQQNLAD 215
+AS++NL
Sbjct: 61 QSASRENLGG 70
>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A
{Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A
2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A
2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...
Length = 62
Score = 93.1 bits (232), Expect = 4e-23
Identities = 45/62 (72%), Positives = 55/62 (88%)
Query: 142 IDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKK 201
+D TGKE V+ LYDY EKSPRE+++KK D+LTLLNS NKDWWK+EVN RQGFVPAAY+KK
Sbjct: 1 MDETGKELVLVLYDYQEKSPRELTVKKGDILTLLNSTNKDWWKIEVNGRQGFVPAAYLKK 60
Query: 202 ME 203
++
Sbjct: 61 LD 62
>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel
beta sheets, structural protein; 2.30A {Gallus gallus}
SCOP: b.34.2.1
Length = 83
Score = 92.1 bits (229), Expect = 2e-22
Identities = 53/79 (67%), Positives = 59/79 (74%)
Query: 132 QSCRQQETPVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQ 191
+ D TGKE V+ALYDY EKSPREV+MKK D+LTLLNS NKDWWKVEVNDRQ
Sbjct: 2 RGSHHHHHHGSDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQ 61
Query: 192 GFVPAAYVKKMEAGLTASQ 210
GFVPAAYVKK+ A + Q
Sbjct: 62 GFVPAAYVKKLAAAWSHPQ 80
>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural
genomics, riken structural genomics/proteomics
initiative, RSGI, unknown function; NMR {Homo sapiens}
SCOP: b.34.2.1
Length = 79
Score = 87.4 bits (217), Expect = 6e-21
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 143 DVTGKECVIALYDYTEKSPREVSMKKSDVLTLLN----SNNKDWWKVEVNDRQGFVPAAY 198
+ G + A+Y + ++P E+S+ + L +L + N +WW EVN ++G+VP+ Y
Sbjct: 9 EAEGNQVYFAVYTFKARNPNELSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNY 68
Query: 199 VKKMEAGLTA 208
++K E+G ++
Sbjct: 69 IRKTESGPSS 78
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling
protein; 1.80A {Mus musculus}
Length = 60
Score = 84.2 bits (209), Expect = 4e-20
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 144 VTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVK 200
+ E IA +DY +S RE+S KK L L + ++DWW+ N G VP Y+
Sbjct: 3 LGSPEFAIAKFDYVGRSARELSFKKGASLLLYHRASEDWWEGRHNGIDGLVPHQYIV 59
>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 71
Score = 82.4 bits (204), Expect = 3e-19
Identities = 17/65 (26%), Positives = 36/65 (55%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEA 204
+G+E + + YT +S E+ +K + ++ N + WW + ++G+ PA+Y+KK +
Sbjct: 6 SGEEKYVTVQPYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYLKKAKD 65
Query: 205 GLTAS 209
+S
Sbjct: 66 SGPSS 70
>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase,
tyrosine-protein kinase LYK, kinase EMT, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 85
Score = 82.8 bits (205), Expect = 3e-19
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 130 QAQSCRQQETPVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVE-VN 188
S P+ + VIALYDY P+E+++++++ LL+S+ WW+V+ N
Sbjct: 3 SGSSGEDNRRPL-WEPEETVVIALYDYQTNDPQELALRRNEEYCLLDSSEIHWWRVQDRN 61
Query: 189 DRQGFVPAAYVKKME 203
+G+VP++Y+ +
Sbjct: 62 GHEGYVPSSYLVEKS 76
>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin
SH3 domain, SPC-S19P20S circular permutant, S protein;
NMR {Synthetic}
Length = 73
Score = 81.7 bits (202), Expect = 5e-19
Identities = 39/55 (70%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Query: 151 IALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEAG 205
L Y REV+MKK D+LTLLNS NKDWWKVEVNDRQGFVPAAYVKK+++G
Sbjct: 4 PPLPPY-SAGGREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDSG 57
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural
protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Length = 65
Score = 80.5 bits (199), Expect = 1e-18
Identities = 46/65 (70%), Positives = 52/65 (80%), Gaps = 8/65 (12%)
Query: 147 KECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEV--------NDRQGFVPAAY 198
KE V+ALYDY EKSPREV+MKK D+LTLLNS NKDWWKVEV +RQGFVPAAY
Sbjct: 1 KELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVKITVNGKTYERQGFVPAAY 60
Query: 199 VKKME 203
VKK++
Sbjct: 61 VKKLD 65
>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418
protein, SH3MD1, SH3 multiple domains 1, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 70
Score = 80.4 bits (199), Expect = 1e-18
Identities = 17/64 (26%), Positives = 38/64 (59%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEA 204
+G E + + +Y ++ E+S++ +V+ ++ N WW V ++ QG+VPA Y++ +
Sbjct: 6 SGLEQYVVVSNYKKQENSELSLQAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNS 65
Query: 205 GLTA 208
G ++
Sbjct: 66 GPSS 69
>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine
nucleotide exchange factor (GEF) 9, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 81
Score = 79.7 bits (197), Expect = 3e-18
Identities = 18/58 (31%), Positives = 37/58 (63%)
Query: 146 GKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKME 203
A++D+ + RE++ K DV+ +L+++NKDWW +++D +G+ PA++V+
Sbjct: 9 SIVSAEAVWDHVTMANRELAFKAGDVIKVLDASNKDWWWGQIDDEEGWFPASFVRLWV 66
>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain,
formin-binding protein 2, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 72
Score = 77.4 bits (191), Expect = 2e-17
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 146 GKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEAG 205
IA +DY ++ RE+S KK L L + DWW+ N G +P Y+ +
Sbjct: 8 EPIEAIAKFDYVGRTARELSFKKGASLLLYQRASDDWWEGRHNGIDGLIPHQYIVVQDTS 67
Query: 206 LTAS 209
+S
Sbjct: 68 GPSS 71
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3,
cysteine-rich domain protein, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 68
Score = 76.9 bits (190), Expect = 2e-17
Identities = 20/60 (33%), Positives = 37/60 (61%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEA 204
+ +ALY + + ++ M+ D++TLL +N+DWWK ++ DR GF PA +V+++
Sbjct: 5 SSGNTYVALYKFVPQENEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGFFPANFVQRLSG 64
>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 76
Score = 76.6 bits (189), Expect = 3e-17
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 146 GKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKME 203
G +A + YT ++ +E+S ++ DVL L + DWW+ E N +G +P Y+
Sbjct: 9 GVVEAVACFAYTGRTAQELSFRRGDVLRLHERASSDWWRGEHNGMRGLIPHKYITLPA 66
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton,
hemidesmosomes epidermolysis bullosa, structural
protein; 2.05A {Homo sapiens} PDB: 2odu_A
Length = 235
Score = 81.7 bits (201), Expect = 3e-17
Identities = 30/231 (12%), Positives = 75/231 (32%), Gaps = 9/231 (3%)
Query: 465 QTLQQFSRDADEMENWIAEKLQLATEESY-KDPANIQSKHQKHQAF-EAELAANADRIQS 522
Q++ + W+ E + I+ + F E EL A
Sbjct: 11 LRWQEYRELVLLLLQWMRHHTAAFEERRFPSSFEEIEILWSQFLKFKEMELPAKEADKNR 70
Query: 523 VLAMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVK 582
+ Q+L Q + + +W L E+ +L+ + + A++
Sbjct: 71 SKGIYQSLEGAVQAGQLKVPPGYHPLDVEKEWGKLHVAILEREKQLRS---EFERLEALQ 127
Query: 583 DLPYFSKKDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGAL 642
+ + + AE ++ +A L + D + + ++ + ++ ++ + I L
Sbjct: 128 RIVTKLQMEAGLAEEQLNQADALLQS---DVRLLAAGKVPQRAGEVERDLDKADSMIRLL 184
Query: 643 QTLADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQ 693
L H + + + ++ R ++ R + G + Q
Sbjct: 185 FNDVQTLKDGRHPQGEQMYRRVYRLHKRLVAIRTEY-NLRLKAGVAAPATQ 234
Score = 75.5 bits (185), Expect = 4e-15
Identities = 25/228 (10%), Positives = 68/228 (29%), Gaps = 17/228 (7%)
Query: 897 RLNEANTLHQFFRDIADE-ESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAEL---- 951
R NE Q +R++ W++ + ++ L + + +
Sbjct: 5 RANELQLRWQEYRELVLLLLQWMRHHTAAFEERRFPSSFEEIEILWSQFLKFKEMELPAK 64
Query: 952 ASHQPAIQNVQETGEKLMDVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESLTYQ 1011
+ + + + ++ E + L VP + + W +L R ++L
Sbjct: 65 EADKNRSKGIYQSLEGAVQAGQLKVPP-GYHPLDVEKEWGKLHVAILEREKQLRSEFERL 123
Query: 1012 H--------FLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHRDR 1063
+ E +++ LL + + ++ E D
Sbjct: 124 EALQRIVTKLQMEAGLAEEQLNQADALLQSDVRLLAAGK---VPQRAGEVERDLDKADSM 180
Query: 1064 CADICSAGNKLIEAKNHHADSITQRCQQLQLKLDNLMALATKRKTKLM 1111
+ + L + ++ + + +R +L +L + R +
Sbjct: 181 IRLLFNDVQTLKDGRHPQGEQMYRRVYRLHKRLVAIRTEYNLRLKAGV 228
Score = 67.4 bits (164), Expect = 3e-12
Identities = 33/228 (14%), Positives = 72/228 (31%), Gaps = 14/228 (6%)
Query: 689 QTLQQFSRDADEMENWIAEKLQLATEESY-KDPANIQSKHQKHQAF-EAELAANADRIQS 746
Q++ + W+ E + I+ + F E EL A
Sbjct: 11 LRWQEYRELVLLLLQWMRHHTAAFEERRFPSSFEEIEILWSQFLKFKEMELPAKEADKNR 70
Query: 747 VLAMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAV- 805
+ Q+L Q + + +W L E+ +L+ ++ + +
Sbjct: 71 SKGIYQSLEGAVQAGQLKVPPGYHPLDVEKEWGKLHVAILEREKQLRSEFERLEALQRIV 130
Query: 806 -------KDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQ 858
+ L + ++LL S+ L + + ++ VE D+ D I+ +
Sbjct: 131 TKLQMEAGLAEEQLNQADALLQSDV---RLLAAGKVPQRAGEVERDLDKADSMIRLLFND 187
Query: 859 ADSLIDSGQFDASSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQ 906
+L D + + +++R I+ R + A Q
Sbjct: 188 VQTLKDGRHPQGEQMYRRVYRLHKRLVAIRTEYNLRL-KAGVAAPATQ 234
Score = 66.3 bits (161), Expect = 6e-12
Identities = 29/250 (11%), Positives = 68/250 (27%), Gaps = 20/250 (8%)
Query: 222 LETANDIQERREQVLNRYADFKSEARSKREKLEDITVKEVKILETANDIQERREQVLNRY 281
AN++Q R ++ R E+ E E + +++
Sbjct: 3 HMRANELQLRWQEYRELVLLLLQWMRHHTAAFEE---------RRFPSSFEEIEILWSQF 53
Query: 282 ADFKSEARSKREKLEDSRRFQYFKRDADELESWIYEKLQAASDESYKETTN--LQAKIQK 339
FK E K LE + +
Sbjct: 54 LKFKEM-----ELPAKEADKNRSKGIYQSLEGAVQAGQLKVPPGYHPLDVEKEWGKLHVA 108
Query: 340 HQAFEAEVAAHSNAIVVLDNTGNDFYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALIK 399
E ++ + + L + AE ++ +A L + D + + +
Sbjct: 109 ILEREKQLRSEFERLEALQRIVTKLQMEAGLAEEQLNQADALLQS---DVRLLAAGKVPQ 165
Query: 400 KHEDFDKAINAHEEKIGALQTLADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRS 459
+ + ++ ++ + I L L H + + + ++ R ++ R
Sbjct: 166 RAGEVERDLDKADSMIRLLFNDVQTLKDGRHPQGEQMYRRVYRLHKRLVAIRTEY-NLRL 224
Query: 460 RLGESQTLQQ 469
+ G + Q
Sbjct: 225 KAGVAAPATQ 234
Score = 56.3 bits (135), Expect = 1e-08
Identities = 24/228 (10%), Positives = 67/228 (29%), Gaps = 15/228 (6%)
Query: 1002 QKLDESLTYQHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQGLLKKHDAFETDFSVHR 1061
+ + L +Q + V W+ + + ++ L + F+ +
Sbjct: 5 RANELQLRWQEYRELVLLLLQWMRHHTAAFEERRFPSSFEEIEILWSQFLKFKEMELPAK 64
Query: 1062 DRCADICSAGNKLIEAK---NHHADSITQRCQQLQLKLDNLMALATKRKTKLMDNSAYLQ 1118
+ + + +E ++ + L +R+ +L L+
Sbjct: 65 EADKNRSKGIYQSLEGAVQAGQLKVPPGYHPLDVEKEWGKLHVAILEREKQLRSEFERLE 124
Query: 1119 --------FMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEG 1170
+A + E + + ++S+ L + + + L +
Sbjct: 125 ALQRIVTKLQMEAGLAEEQLNQADALLQSDV---RLLAAGKVPQRAGEVERDLDKAD-SM 180
Query: 1171 IQNITTLKDQLVASNHDQTPAIVKRHGDVIARWQKLLGDSNARKQRLL 1218
I+ + L H Q + +R + R + + N R + +
Sbjct: 181 IRLLFNDVQTLKDGRHPQGEQMYRRVYRLHKRLVAIRTEYNLRLKAGV 228
Score = 51.7 bits (123), Expect = 4e-07
Identities = 30/208 (14%), Positives = 62/208 (29%), Gaps = 4/208 (1%)
Query: 1274 ASSFNSWFENAEEDLTDPVRCNSIEEIRALREAHAQFQAS-LSSAQADFEALAALDQQIK 1332
W + + +S EEI L +F+ L + +AD + Q ++
Sbjct: 20 VLLLLQWMRHHTAAFEERRFPSSFEEIEILWSQFLKFKEMELPAKEADKNRSKGIYQSLE 79
Query: 1333 SF--NVGPNPYTWFTMEALEDTWRNLQKIIKERDIELAKEATRQDENDALRKEFAKHANA 1390
+ +E W L I ER+ +L E R + + + A
Sbjct: 80 GAVQAGQLKVPPGYHPLDVEKEWGKLHVAILEREKQLRSEFERLEALQRIVTKLQMEAGL 139
Query: 1391 FHQWLTETRTSMMEGTGSLEQQLEAIKRKAAEVRSRRSDLKKIEDLGAILEEHLILDNRY 1450
+ L + +++ L + +R R I L ++ +
Sbjct: 140 AEEQLNQADA-LLQSDVRLLAAGKVPQRAGEVERDLDKADSMIRLLFNDVQTLKDGRHPQ 198
Query: 1451 TEHSTVGLAQQWDQLDQLGMRMQHNLEQ 1478
E + + +L + L+
Sbjct: 199 GEQMYRRVYRLHKRLVAIRTEYNLRLKA 226
Score = 29.3 bits (65), Expect = 7.8
Identities = 10/85 (11%), Positives = 26/85 (30%), Gaps = 1/85 (1%)
Query: 52 EDYGKDLTSVQNLQKKHALLEADVASHLDRIESVKAATEQFLEHYGKDEDSSEALLKKHE 111
+ K L S + + + E + L+ ++ + ++
Sbjct: 110 LEREKQLRSEFERLEALQRIVTKLQMEAGLAEEQLNQADALLQS-DVRLLAAGKVPQRAG 168
Query: 112 ALVSDLEAFGNTILGLREQAQSCRQ 136
+ DL+ + I L Q+ +
Sbjct: 169 EVERDLDKADSMIRLLFNDVQTLKD 193
>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural
genomics/proteomics initiative, RSGI, structural
genomics, signaling protein; NMR {Homo sapiens} SCOP:
b.34.2.1
Length = 69
Score = 76.2 bits (188), Expect = 4e-17
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEA 204
+G E IALY Y+ P +++ + + + + + +WW + DR G P+ YVK ++
Sbjct: 6 SGGEEYIALYPYSSVEPGDLTFTEGEEILVTQKDG-EWWTGSIGDRSGIFPSNYVKPKDS 64
Query: 205 GLTA 208
G ++
Sbjct: 65 GPSS 68
>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3
domain, PEST phosphatase-interacting protein 1, CD2-
binding protein 1; NMR {Homo sapiens}
Length = 69
Score = 76.1 bits (188), Expect = 4e-17
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEA 204
+G + ALYDYT ++P E+ + D+L ++ WW VE N ++GFVP +Y++K+
Sbjct: 6 SGAQEYRALYDYTAQNPDELDLSAGDILEVILEGEDGWWTVERNGQRGFVPGSYLEKLSG 65
>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3,
signaling protein; NMR {Gallus gallus}
Length = 77
Score = 75.3 bits (185), Expect = 9e-17
Identities = 38/47 (80%), Positives = 43/47 (91%)
Query: 159 KSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEAG 205
PREV+MKK D+LTLLNS NKDWWKVEVNDRQGFVPAAYVKK+++G
Sbjct: 3 MGPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDSG 49
>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 68
Score = 75.0 bits (185), Expect = 1e-16
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKME 203
+ E +A+ DY ++S + + + +L DWW E G++PA +V K
Sbjct: 5 SSGEEFVAIADYAATDETQLSFLRGEKILILRQTTADWWWGERAGCCGYIPANHVGKHS 63
>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR
{Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A
2k7a_A
Length = 77
Score = 75.1 bits (185), Expect = 1e-16
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 136 QQETPVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVE-VNDRQGFV 194
+ + VIALYDY P+E++++ + LL+S+ WW+V+ N +G+
Sbjct: 9 EDNRRSFQEPEETLVIALYDYQTNDPQELALRCDEEYYLLDSSEIHWWRVQDKNGHEGYA 68
Query: 195 PAAYVKKM 202
P++Y+ +
Sbjct: 69 PSSYLVEK 76
>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo
sapiens}
Length = 79
Score = 74.3 bits (183), Expect = 2e-16
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 143 DVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKM 202
D AL+D+T S E++ K DV+ LL+ NKDW + V G P ++VK +
Sbjct: 14 DRMAAPRAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKIL 73
Query: 203 E 203
+
Sbjct: 74 K 74
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding,
cell adhesion, cytoskeleton, LIPO magnesium, manganese,
metal-binding, myristate; 1.40A {Homo sapiens} PDB:
3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A
1bbz_A 1awo_A
Length = 63
Score = 73.8 bits (182), Expect = 2e-16
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 147 KECVIALYDYTEKSPREVSMKKSDVLTLLN-SNNKDWWKVEVNDRQGFVPAAYVKKMEA 204
+ALYD+ +S+ K + L +L ++N +W + + + QG+VP+AY+ + +
Sbjct: 5 PNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSAYITPVNS 63
>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication,
repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus}
SCOP: b.34.2.1
Length = 63
Score = 73.1 bits (180), Expect = 4e-16
Identities = 38/45 (84%), Positives = 43/45 (95%)
Query: 161 PREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEAG 205
PREV+MKK D+LTLLNS NKDWWKVEVNDRQGFVPAAYVKK+++G
Sbjct: 3 PREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDSG 47
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding,
duplication, repeat, SH3 domain, cytoskeleton, metal
binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1
PDB: 1tud_A
Length = 62
Score = 71.7 bits (176), Expect = 1e-15
Identities = 38/62 (61%), Positives = 43/62 (69%)
Query: 127 LREQAQSCRQQETPVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVE 186
+ Q + TGKE V+ALYDY EKSPREV+MKK D+LTLLNS NKDWWKVE
Sbjct: 1 MDRQGFVPAAYVKKLDSGTGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVE 60
Query: 187 VN 188
VN
Sbjct: 61 VN 62
>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked
agammaglobulinemia, XLA, BTK, SH3 domain, transferase;
NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A
Length = 67
Score = 71.1 bits (175), Expect = 2e-15
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVE-VNDRQGFVPAAYVKKME 203
+ + V+ALYDY + ++ ++K D +L +N WW+ N ++G++P+ YV + E
Sbjct: 6 SELKKVVALYDYMPMNANDLQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTEAE 65
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate
head cDNA, riken FULL-length enriched library,
clone:4831401O22, structural genomics; NMR {Mus
musculus}
Length = 68
Score = 71.1 bits (175), Expect = 3e-15
Identities = 16/60 (26%), Positives = 31/60 (51%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEA 204
+ AL +Y K+P ++ K DV+ L +++W++ E+N G PA+ V+ +
Sbjct: 5 SSGPRAKALCNYRGKNPGDLKFNKGDVILLRRQLDENWYQGEINGVSGIFPASSVEVISG 64
>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL,
SH3 domain, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 81
Score = 71.3 bits (175), Expect = 3e-15
Identities = 16/66 (24%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 146 GKECVIALYDYTEKSPREVSMKKSDVLTLLN-SNNKDWWKVEVND--RQGFVPAAYVKKM 202
G +C+ ++T P E++ +K DV+T+L NK W++V+ + ++G + A +++
Sbjct: 17 GTQCI-TKCEHTRPKPGELAFRKGDVVTILEACENKSWYRVKHHTSGQEGLLAAGALRER 75
Query: 203 EAGLTA 208
+
Sbjct: 76 SGPSSG 81
>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing
adapter molecule 1, SCAM-1, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 90
Score = 71.3 bits (175), Expect = 3e-15
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 133 SCRQQETPVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWK--VEVNDR 190
S + P V +A Y + E+S +K + + L+ N++W++ + R
Sbjct: 3 SGSSGKPPTYQVLEYGEAVAQYTFKGDLEVELSFRKGEHICLIRKVNENWYEGRITGTGR 62
Query: 191 QGFVPAAYVKKME 203
QG PA+YV+
Sbjct: 63 QGIFPASYVQVSR 75
>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched
library, clone:9530076O17...; SH3_1 domain; NMR {Mus
musculus}
Length = 109
Score = 71.7 bits (176), Expect = 5e-15
Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Query: 121 GNTILGLREQAQSCRQQETPVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNK 180
G++ + S P G +ALYDY ++ ++S KK + ++N+
Sbjct: 1 GSSGSSGASSSFSVVSSSYPTGLTGGVTIFVALYDYEARTTEDLSFKKGERFQIINNTEG 60
Query: 181 DWWKVE--VNDRQGFVPAAYVKKME 203
DWW+ + G++P+ YV +
Sbjct: 61 DWWEARSIATGKSGYIPSNYVVPAD 85
>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 68
Score = 70.3 bits (173), Expect = 5e-15
Identities = 12/58 (20%), Positives = 29/58 (50%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKM 202
+ E L+ + ++ E+ + +++ +L N +W V N ++G VP Y++ +
Sbjct: 5 SSGEAHRVLFGFVPETKEELQVMPGNIVFVLKKGNDNWATVMFNGQKGLVPCNYLEPV 62
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel,
endosome, L binding, membrane, phosphoprotein,
proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Length = 73
Score = 70.4 bits (173), Expect = 6e-15
Identities = 15/59 (25%), Positives = 35/59 (59%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKME 203
+ ALYD+ ++ E+ ++ D++TL N +++W++ ++ + GF P +YV+ +
Sbjct: 11 LDQPSCKALYDFEPENDGELGFREGDLITLTNQIDENWYEGMLHGQSGFFPLSYVQVLV 69
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural
protein; NMR {Dictyostelium discoideum}
Length = 80
Score = 69.7 bits (171), Expect = 9e-15
Identities = 13/66 (19%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 140 PVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKD-WWKVEVNDRQGFVPAAY 198
P+ + AL DY + K++D++T+ + ++ W+ ++N ++G P +
Sbjct: 3 PLGSPEFAKYARALKDYNVSDTSLLPFKRNDIITITFKDQENKWFMGQLNGKEGSFPVDH 62
Query: 199 VKKMEA 204
V+ + +
Sbjct: 63 VEILLS 68
>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein,
phosphorylation, SH3 domain, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 78
Score = 69.7 bits (171), Expect = 9e-15
Identities = 16/60 (26%), Positives = 33/60 (55%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEA 204
+ E V+A+YDYT+ E+S ++ ++ ++ N+ W++ +N G P YV+ +
Sbjct: 15 SYLEKVVAIYDYTKDKEDELSFQEGAIIYVIKKNDDGWYEGVMNGVTGLFPGNYVESISG 74
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3
domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Length = 60
Score = 69.1 bits (170), Expect = 1e-14
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 144 VTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKME 203
+ AL+D+T S E++ K DV+ LL+ NKDW + V G P ++VK ++
Sbjct: 1 LIKHMRAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKILK 60
>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein
NCK2; T-cell receptor, SH3 domain, immunology, SH2
domain; NMR {Homo sapiens}
Length = 86
Score = 69.8 bits (171), Expect = 1e-14
Identities = 23/67 (34%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 136 QQETPVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKV-EVNDRQGFV 194
+ +T + VIA +DYT + +E+ +KK++ L LL+ ++K WW+V +R G+V
Sbjct: 20 GSLVKNLHMTEEVIVIAKWDYTAQQDQELDIKKNERLWLLD-DSKTWWRVRNAANRTGYV 78
Query: 195 PAAYVKK 201
P+ YV++
Sbjct: 79 PSNYVER 85
>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 80
Score = 69.4 bits (170), Expect = 1e-14
Identities = 12/62 (19%), Positives = 23/62 (37%)
Query: 143 DVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKM 202
+G + Y + E+S + +L WW V + +G+ P+ Y+
Sbjct: 4 GSSGATSYMTCSAYQKVQDSEISFPAGVEVQVLEKQESGWWYVRFGELEGWAPSHYLVLD 63
Query: 203 EA 204
E
Sbjct: 64 EN 65
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human
osteoclast stimulating factor 1, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 68
Score = 68.4 bits (168), Expect = 2e-14
Identities = 14/60 (23%), Positives = 32/60 (53%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEA 204
+ + ALY + ++P E+ ++ D++ + + ++ +WWK R G +P+ YV +
Sbjct: 5 SSGKVFRALYTFEPRTPDELYFEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQSG 64
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus
musculus}
Length = 60
Score = 68.0 bits (167), Expect = 2e-14
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 146 GKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKM 202
G ALY Y + E+S +D++ ++ + WW + +QG P YV K+
Sbjct: 4 GSPQCKALYAYDAQDTDELSFNANDIIDIIKEDPSGWWTGRLRGKQGLFPNNYVTKI 60
>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain,
signaling protein; NMR {Homo sapiens}
Length = 72
Score = 68.1 bits (167), Expect = 3e-14
Identities = 21/69 (30%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVE-VNDRQGFVPAAYVKKME 203
+ V+A +DY + +E+ +KK++ L LL+ ++K WW+V ++ GFVP+ YV++
Sbjct: 5 AEEVVVVAKFDYVAQQEQELDIKKNERLWLLD-DSKSWWRVRNSMNKTGFVPSNYVERKN 63
Query: 204 AGLTASQQN 212
+ A+ +
Sbjct: 64 SARAAANSS 72
>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein
2A, endophilin 1, EEN-B1, structural genomics, NPPSFA;
NMR {Homo sapiens} PDB: 2knb_B 3iql_A
Length = 73
Score = 68.1 bits (167), Expect = 3e-14
Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEA 204
+ C ALYD+ ++ E+ K+ D++TL N +++W++ ++ GF P YV+ + A
Sbjct: 5 SSGPCCRALYDFEPENEGELGFKEGDIITLTNQIDENWYEGMLHGHSGFFPINYVEILVA 64
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces
cerevisiae} PDB: 1ynz_A
Length = 58
Score = 67.6 bits (166), Expect = 3e-14
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 146 GKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVK 200
G E V ALY + + ++ +K D + LL + +W+K N R G PA YVK
Sbjct: 1 GMEYVEALYQFDPQQDGDLGLKPGDKVQLLEKLSPEWYKGSCNGRTGIFPANYVK 55
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel,
transferase; HET: PG4; 1.76A {Homo sapiens} PDB: 3h0i_A
3h0f_A*
Length = 73
Score = 68.1 bits (167), Expect = 3e-14
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEV--NDRQGFVPAAYVKKM 202
TG +ALYDY + ++S K + +LNS+ DWW+ G++P+ YV +
Sbjct: 13 TGVTLFVALYDYEAITEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAPV 72
Query: 203 E 203
+
Sbjct: 73 D 73
>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Mus musculus}
Length = 78
Score = 68.1 bits (167), Expect = 3e-14
Identities = 14/59 (23%), Positives = 33/59 (55%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKME 203
+ AL D+ E+ +K+D++T+++ ++ W E+N +G+ PA +V+ ++
Sbjct: 5 SSGRRAKALLDFERHDDDELGFRKNDIITIISQKDEHCWVGELNGLRGWFPAKFVEVLD 63
>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin,
C-CBL-associated protein, CAP, SH3 domain protein 5
SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens}
PDB: 2dlm_A
Length = 68
Score = 67.6 bits (166), Expect = 4e-14
Identities = 11/59 (18%), Positives = 32/59 (54%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKME 203
+ A +D+ ++ +E+ ++K D++ + +++W++ E + R G P Y++ +
Sbjct: 5 SSGRPARAKFDFKAQTLKELPLQKGDIVYIYKQIDQNWYEGEHHGRVGIFPRTYIELLS 63
>2vwf_A Growth factor receptor-bound protein 2; polymorphism,
phosphoprotein, golgi apparatus, alternative splicing,
HOST-virus interaction, SH3C, signaling; 1.58A {Homo
sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Length = 58
Score = 67.2 bits (165), Expect = 4e-14
Identities = 14/57 (24%), Positives = 31/57 (54%)
Query: 146 GKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKM 202
G V AL+D+ + E+ ++ D + ++++++ +WWK + + G P YV +
Sbjct: 1 GPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTAV 57
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural
genomics, phosphorylation, structural protein, yeast,
SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Length = 60
Score = 67.2 bits (165), Expect = 5e-14
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 146 GKECVIALYDYTEKSPREVSMKKSDVLTLLN-SNNKDWWKVEV--NDRQGFVPAAYVKKM 202
G E I YD+ +S E+++K D + +L+ +KDWW ++ + + G VPA +++ +
Sbjct: 1 GMERGIVQYDFMAESQDELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEPV 60
>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural
genomics/proteomics initiative, RSGI, structural
genomics; NMR {Homo sapiens} SCOP: b.34.2.1
Length = 98
Score = 68.2 bits (167), Expect = 5e-14
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 147 KECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKME 203
VIA+YDY + E+S K ++ ++N ++ DWW+ E+N G P+ YVK
Sbjct: 34 VCQVIAMYDYAANNEDELSFSKGQLINVMNKDDPDWWQGEINGVTGLFPSNYVKMTT 90
>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein;
SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 68
Score = 66.9 bits (164), Expect = 7e-14
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKM 202
+ + V LYD+T ++ E+S+ K +VL +L + W + + G+VP + +
Sbjct: 5 SSGKYVKILYDFTARNANELSVLKDEVLEVLEDGRQWWKLRSRSGQAGYVPCNILGEA 62
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex,
helix-turn-helix, hormone/growth factor complex; NMR
{Homo sapiens} SCOP: b.34.2.1
Length = 62
Score = 66.8 bits (164), Expect = 7e-14
Identities = 13/56 (23%), Positives = 28/56 (50%)
Query: 147 KECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKM 202
V AL+ Y P ++ ++ D++ +L+ N++W + E + G P +V+
Sbjct: 5 GSQVEALFSYEATQPEDLEFQEGDIILVLSKVNEEWLEGESKGKVGIFPKVFVEDS 60
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain,
phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Length = 67
Score = 66.9 bits (164), Expect = 8e-14
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 146 GKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVE-VNDRQGFVPAAYVKKME 203
G E V+A+YD+ ++ +++ +L N+ WW+ +G++P+ YV +
Sbjct: 1 GSEIVVAMYDFQATEAHDLRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGKK 59
>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 79
Score = 66.6 bits (163), Expect = 1e-13
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 149 CVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEAG 205
+ALYDY E+S D++T + + WW+ R G PA YV+ ++G
Sbjct: 19 TAVALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGVCKGRYGLFPANYVELRQSG 75
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure,
signaling protein; NMR {Homo sapiens}
Length = 68
Score = 66.1 bits (162), Expect = 1e-13
Identities = 16/55 (29%), Positives = 32/55 (58%)
Query: 149 CVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKME 203
C LYD+ ++ E+ K+ D++TL N +++W++ ++ GF P YV+ +
Sbjct: 5 CCRGLYDFEPENQGELGFKEGDIITLTNQIDENWYEGMIHGESGFFPINYVEVIV 59
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85,
PIX/COOL, protein-protein interaction, X-RAY,
endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Length = 64
Score = 65.7 bits (161), Expect = 1e-13
Identities = 15/59 (25%), Positives = 31/59 (52%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKME 203
+ V A +++ + + E+S K DV+ + WW+ N R G+ P+ YV++++
Sbjct: 4 NSQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREIK 62
>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 79
Score = 66.2 bits (162), Expect = 1e-13
Identities = 15/60 (25%), Positives = 33/60 (55%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEA 204
+ ALY + + E++++K D++ + + WW +N ++G PAAYV+++ +
Sbjct: 5 SSGRLCKALYSFQARQDDELNLEKGDIVIIHEKKEEGWWFGSLNGKKGHFPAAYVEELPS 64
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A
{Acanthamoeba} PDB: 2drk_A
Length = 58
Score = 65.7 bits (161), Expect = 2e-13
Identities = 19/57 (33%), Positives = 34/57 (59%)
Query: 146 GKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKM 202
V ALYDY ++ E++ K+ D + + + WW+ E+N ++G+VPA YV+ +
Sbjct: 2 PGIQVKALYDYDAQTGDELTFKEGDTIIVHQKDPAGWWEGELNGKRGWVPANYVQDI 58
>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain,
NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens}
SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B
Length = 193
Score = 70.0 bits (171), Expect = 2e-13
Identities = 25/126 (19%), Positives = 58/126 (46%), Gaps = 3/126 (2%)
Query: 129 EQAQSCRQQETPVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVN 188
E S + E P + G+ +A+ YT EVS+ + + + +++ WW + +
Sbjct: 64 EPLDSPDETEDPEPNYAGEPY-VAIKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKD 122
Query: 189 DRQGFVPAAYVKKMEAGLTASQQNLADVKEVKILETAN--DIQERREQVLNRYADFKSEA 246
D G+ P+ Y++K ++ +Q+ + + N I +R + L++ A ++
Sbjct: 123 DVTGYFPSMYLQKSGQDVSQAQRQIKRGAPPRRSSIRNAHSIHQRSRKRLSQDAYRRNSV 182
Query: 247 RSKREK 252
R +++
Sbjct: 183 RFLQQR 188
Score = 64.6 bits (157), Expect = 1e-11
Identities = 13/71 (18%), Positives = 36/71 (50%)
Query: 148 ECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEAGLT 207
+ A+ DY + S E+++ DV+ ++ + WW ++ ++G++PA++++ +++
Sbjct: 12 QTYRAIADYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDE 71
Query: 208 ASQQNLADVKE 218
E
Sbjct: 72 TEDPEPNYAGE 82
>2v1r_A Peroxisomal membrane protein PAS20; protein transport,
translocation, transmembrane, peptide COM structural
genomics, peroxisome; 2.1A {Saccharomyces cerevisiae}
SCOP: b.34.2.1
Length = 80
Score = 66.3 bits (162), Expect = 2e-13
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 139 TPVIDVTGKECVIALYDYTEKSPR-EVSMKKSDVLTLLN-----SNNKDWWKVEVND-RQ 191
+ ID + E ALYD+ ++P EV++KK D++ +L+ + DWWKV +
Sbjct: 6 SEPIDPSKLEFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNI 65
Query: 192 GFVPAAYVKKME 203
G++P Y++ ++
Sbjct: 66 GYIPYNYIEIIK 77
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein;
1.07A {Homo sapiens}
Length = 58
Score = 65.2 bits (160), Expect = 2e-13
Identities = 14/56 (25%), Positives = 31/56 (55%)
Query: 146 GKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKK 201
+ ALY + ++P E+ ++ D++ + + ++ +WWK R G +P+ YV +
Sbjct: 2 QVKVFRALYTFEPRTPDELYFEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAE 57
>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3
domain, riken structural genomics/proteomics initiative,
RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Length = 76
Score = 65.8 bits (161), Expect = 2e-13
Identities = 14/60 (23%), Positives = 35/60 (58%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEA 204
+ + V A +++ + + E+S+ K D++ + WW+ +N R G+ P+ YV+++++
Sbjct: 8 SHQLIVKARFNFKQTNEDELSVCKGDIIYVTRVEEGGWWEGTLNGRTGWFPSNYVREIKS 67
>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 79
Score = 65.9 bits (161), Expect = 2e-13
Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 3/75 (4%)
Query: 131 AQSCRQQETPVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVE--VN 188
S P + + + L DY ++ + L +++ WWK
Sbjct: 1 GSSGSSGPLPNPEGLDSDFLAVLSDYPSPDISPPIFRRGEKLRVISDEG-GWWKAISLST 59
Query: 189 DRQGFVPAAYVKKME 203
R+ ++P V ++
Sbjct: 60 GRESYIPGICVARVS 74
>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus
musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A
4gbq_A
Length = 74
Score = 65.4 bits (160), Expect = 2e-13
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLN-SNNKDWWKVEVNDRQGFVPAAYVKKME 203
G IA YD+ + E+S K+ D+L +LN +++W+K E+N + GF+P Y++
Sbjct: 7 VGSMEAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKP 66
>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine
kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A
4hck_A 5hck_A
Length = 86
Score = 65.9 bits (161), Expect = 3e-13
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVE--VNDRQGFVPAAYVKKM 202
+ V+ALYDY ++S +K D + +L + +WWK ++G++P+ YV ++
Sbjct: 23 SEDIIVVALYDYEAIHHEDLSFQKGDQMVVLEESG-EWWKARSLATRKEGYIPSNYVARV 81
Query: 203 E 203
+
Sbjct: 82 D 82
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Length = 65
Score = 65.3 bits (160), Expect = 3e-13
Identities = 15/64 (23%), Positives = 33/64 (51%)
Query: 148 ECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEAGLT 207
+ +D+ +SP+E++++K D++ + +K+W + E + R G PA YV+ +
Sbjct: 2 KAARLKFDFQAQSPKELTLQKGDIVYIHKEVDKNWLEGEHHGRLGIFPANYVEVLPLEHH 61
Query: 208 ASQQ 211
Sbjct: 62 HHHH 65
>3u23_A CD2-associated protein; structural genomics, structural genomics
consortium, SGC, BE barrel, adaptor protein, protein
binding; 1.11A {Homo sapiens} PDB: 2krn_A
Length = 65
Score = 65.3 bits (160), Expect = 3e-13
Identities = 14/60 (23%), Positives = 32/60 (53%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEA 204
+ K L++Y ++ E+ +K D++ + + WW +N++ G P+ +VK++E
Sbjct: 5 SKKRQCKVLFEYIPQNEDELELKVGDIIDINEEVEEGWWSGTLNNKLGLFPSNFVKELEV 64
>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}
Length = 68
Score = 65.0 bits (159), Expect = 3e-13
Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 143 DVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKV-EVNDRQGFVPAAYVKK 201
+ E IA+ D+T + +++ KK ++L ++ WW + +G VP Y++
Sbjct: 6 KWSTGEEYIAVGDFTAQQVGDLTFKKGEILLVIEKKPDGWWIAKDAKGNEGLVPRTYLEP 65
Query: 202 ME 203
Sbjct: 66 YS 67
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal
transducing adaptor molecule, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 88
Score = 65.5 bits (160), Expect = 4e-13
Identities = 15/66 (22%), Positives = 31/66 (46%)
Query: 138 ETPVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAA 197
++ V ALYD+ E++ K +++ +L+ ++ +WWK E + G P+
Sbjct: 8 SEIQLNNKVARKVRALYDFEAVEDNELTFKHGEIIIVLDDSDANWWKGENHRGIGLFPSN 67
Query: 198 YVKKME 203
+V
Sbjct: 68 FVTTNL 73
>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK,
structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Length = 68
Score = 64.6 bits (158), Expect = 4e-13
Identities = 10/60 (16%), Positives = 29/60 (48%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEA 204
+ + Y ++ E+ +K D++ ++ + WW+ +N + G P+ ++K++
Sbjct: 5 SSGRRCQVAFSYLPQNDDELELKVGDIIEVVGEVEEGWWEGVLNGKTGMFPSNFIKELSG 64
>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418
protein, SH3MD1, SH3 multiple domains 1, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 75
Score = 64.8 bits (158), Expect = 5e-13
Identities = 15/66 (22%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 147 KECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVND----RQGFVPAAYVKKM 202
K+ +++ DY E ++ + +L N WW ++ D +G+VP+ Y++K
Sbjct: 10 KDVYVSIADY-EGDEETAGFQEGVSMEVLERNPNGWWYCQILDGVKPFKGWVPSNYLEKK 68
Query: 203 EAGLTA 208
+G ++
Sbjct: 69 NSGPSS 74
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm,
SH3 domain, signaling protein; NMR {Homo sapiens} PDB:
2rol_A
Length = 68
Score = 64.6 bits (158), Expect = 5e-13
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVE-VNDRQGFVPAAYVKKME 203
+ V+ YD+ ++ E+S+K+ DVL +L+ ++ WWKV ++G+VP +
Sbjct: 6 GALKWVLCNYDFQARNSSELSVKQRDVLEVLDD-SRKWWKVRDPAGQEGYVPYNILTPYP 64
Query: 204 AG 205
A
Sbjct: 65 AA 66
>1w1f_A Tyrosine-protein kinase LYN; SH3-domain, SH3 domain, tyrosine
kinase, signal transduction; NMR {Homo sapiens} PDB:
1wa7_A
Length = 65
Score = 64.2 bits (157), Expect = 5e-13
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVE--VNDRQGFVPAAYVKKM 202
+ V+ALY Y P ++S KK + + +L + +WWK + + ++GF+P+ YV K+
Sbjct: 5 EQGDIVVALYPYDGIHPDDLSFKKGEKMKVLEEHG-EWWKAKSLLTKKEGFIPSNYVAKL 63
Query: 203 E 203
Sbjct: 64 N 64
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide
interaction, signaling protein; HET: NCO; 0.92A {Rattus
norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Length = 59
Score = 64.2 bits (157), Expect = 6e-13
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 148 ECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKM 202
V A +++ + + E+S K DV+ + WW+ N R G+ P+ YV+++
Sbjct: 5 SVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREI 59
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Mus musculus}
Length = 77
Score = 64.8 bits (158), Expect = 6e-13
Identities = 15/68 (22%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVE---------VNDRQGFVP 195
+ + +AL+DY ++ ++S + D L +L+++++ WW QG++P
Sbjct: 5 SSGQYFVALFDYQARTAEDLSFRAGDKLQVLDTSHEGWWLARHLEKKGTGLGQQLQGYIP 64
Query: 196 AAYVKKME 203
+ YV +
Sbjct: 65 SNYVAEDS 72
>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo
sapiens}
Length = 69
Score = 64.3 bits (157), Expect = 6e-13
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 150 VIALYDYTEKSPREVSMKKSDVLTLLN---SNNKDWWKVEVNDRQGFVPAAYVKKM 202
ALYD +SP E+S +K D++T+L WW ++ RQG VP +K +
Sbjct: 6 AKALYDNVAESPDELSFRKGDIMTVLEQDTQGLDGWWLCSLHGRQGIVPGNRLKIL 61
>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens}
Length = 85
Score = 64.8 bits (158), Expect = 7e-13
Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKD--WWKVEVNDRQGFVPAAYVKKM 202
+G VIAL Y + +S + D++ LL + W R G PA V+
Sbjct: 6 SGSGYVIALRSYITDNCSLLSFHRGDLIKLLPVATLEPGWQFGSAGGRSGLFPADIVQPA 65
Query: 203 EAG 205
A
Sbjct: 66 AAP 68
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3,
actin-binding, cytoplasm, cytoskeleton, phosphorylation,
SH3 domain, DNA damage, DNA repair, nucleus; NMR
{Saccharomyces cerevisiae}
Length = 71
Score = 64.2 bits (157), Expect = 7e-13
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 146 GKECVIALYDYTEKSPREVSMKKSDVLTLLN-SNNKDWWKVEV--NDRQGFVPAAYVKKM 202
K+ I YD+ +S E+++K D + +L+ +KDWW ++ + + G VPA +++ +
Sbjct: 5 SKKRGIVQYDFMAESQDELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEPV 64
Query: 203 E 203
Sbjct: 65 R 65
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A
{Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A
3sem_A 1k76_A 1kfz_A
Length = 58
Score = 63.3 bits (155), Expect = 9e-13
Identities = 19/54 (35%), Positives = 37/54 (68%)
Query: 147 KECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVK 200
+ V AL+D+ + E++ K+ DV+TL+N ++ +WW+ ++N+R+G P+ YV
Sbjct: 2 TKFVQALFDFNPQESGELAFKRGDVITLINKDDPNWWEGQLNNRRGIFPSNYVC 55
>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR
{Homo sapiens} PDB: 2js2_A
Length = 67
Score = 63.8 bits (156), Expect = 1e-12
Identities = 23/60 (38%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVE-VNDRQGFVPAAYVKKME 203
T + VIA +DYT + +E+ +KK++ L LL+ ++K WW+V +R G+VP+ YV++
Sbjct: 2 TEEVIVIAKWDYTAQQDQELDIKKNERLWLLD-DSKTWWRVRNAANRTGYVPSNYVERKL 60
>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural
genomics/proteomics initiative, RSGI, structural
genomics, endocytosis/exocytosis complex; NMR {Homo
sapiens} SCOP: b.34.2.1
Length = 74
Score = 63.9 bits (156), Expect = 1e-12
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKME 203
AL +T K ++ K D++T+L ++WW EV+ +G+ P +YVK +
Sbjct: 8 VENLKAQALCSWTAKKDNHLNFSKHDIITVLEQQ-ENWWFGEVHGGRGWFPKSYVKIIP 65
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 73
Score = 63.9 bits (156), Expect = 1e-12
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKD---WWKVEVNDRQGFVPAAYVKK 201
+G V ALYDY ++ E+S + ++ +LN N+D +W+ E N R G P+ V++
Sbjct: 6 SGVCFVKALYDYEGQTDDELSFPEGAIIRILNKENQDDDGFWEGEFNGRIGVFPSVLVEE 65
Query: 202 MEAG 205
+ +G
Sbjct: 66 LSSG 69
>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 80
Score = 63.9 bits (156), Expect = 1e-12
Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 138 ETPVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNN--KDWWKVEVNDRQGFVP 195
V ++ V ALY + + P +++ + D +T+++ + DWW+ ++ + G P
Sbjct: 8 HERVGNLNQPIEVTALYSFEGQQPGDLNFQAGDRITVISKTDSHFDWWEGKLRGQTGIFP 67
Query: 196 AAYVKKMEA 204
A YV
Sbjct: 68 ANYVTMNSG 76
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors,
peptoids, protein-protein recognition, proline-rich
motifs, signal transduction; 2.50A {Mus musculus} SCOP:
b.34.2.1
Length = 65
Score = 63.4 bits (155), Expect = 1e-12
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 146 GKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVE-VNDRQGFVPAAYVKKME 203
E V AL+D+ ++ KK D+L + + + WW E ++G +P YV+K
Sbjct: 2 SAEYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYH 60
>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3,
protein-protein interaction, structural genomics; NMR
{Homo sapiens}
Length = 68
Score = 63.4 bits (155), Expect = 1e-12
Identities = 14/59 (23%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKV-EVNDRQGFVPAAYVKKM 202
+ + LY++ ++PRE+++ + + L +L+ ++K WW V R G++P+ ++ +
Sbjct: 5 SSGLKMQVLYEFEARNPRELTVVQGEKLEVLD-HSKRWWLVKNEAGRSGYIPSNILEPL 62
>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein
10, SH3 domain, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 70
Score = 63.4 bits (155), Expect = 1e-12
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKD-WWKVE-VNDRQGFVPAAYVKKM 202
+G CV A+Y + S +SM + + L+L+ + D W +V +G+VP +Y++
Sbjct: 6 SGGHCV-AIYHFEGSSEGTISMAEGEDLSLMEEDKGDGWTRVRRKEGGEGYVPTSYLRVT 64
Query: 203 EA 204
Sbjct: 65 SG 66
>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Mus musculus}
Length = 70
Score = 63.4 bits (155), Expect = 1e-12
Identities = 17/62 (27%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKD--WWKVEVNDRQGFVPAAYVKKM 202
+ + ++ Y ++ E+++K+ D++TL+N + D WW+ E+N R+G P +VK +
Sbjct: 5 SSGDYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLL 64
Query: 203 EA 204
Sbjct: 65 SG 66
>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane,
nuclear protein, phosphorylation, polymorphism,
transport, structural genomics; NMR {Homo sapiens}
Length = 70
Score = 63.4 bits (155), Expect = 1e-12
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 148 ECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVN--DRQGFVPAAYVKKME 203
IA +++ + E+S +K + +TLL +++W++ + RQG P YV +
Sbjct: 8 GEAIAKFNFNGDTQVEMSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVIS 65
>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics,
northeast structural genomics consortiu PSI-2, protein
structure initiative; NMR {Homo sapiens}
Length = 72
Score = 63.5 bits (155), Expect = 1e-12
Identities = 15/65 (23%), Positives = 32/65 (49%)
Query: 136 QQETPVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVP 195
+ + V A+YD+ E++ K +++T+L+ ++ +WWK E + G P
Sbjct: 6 HHHSHMNHQHEARKVRAIYDFEAAEDNELTFKAGEIITVLDDSDPNWWKGETHQGIGLFP 65
Query: 196 AAYVK 200
+ +V
Sbjct: 66 SNFVT 70
>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 71
Score = 63.5 bits (155), Expect = 1e-12
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKD---WWKVEVNDRQGFVPAAYVKK 201
+ ALYD E++ + D+LT+L + + WWK ++ RQG PA ++
Sbjct: 5 SSGLLARALYDNCPDCSDELAFSRGDILTILEQHVPESEGWWKCLLHGRQGLAPANRLQI 64
Query: 202 MEA 204
+
Sbjct: 65 LSG 67
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction,
hydrolase, protein binding; 1.65A {Mus musculus} PDB:
2d1x_A
Length = 65
Score = 63.0 bits (154), Expect = 1e-12
Identities = 19/64 (29%), Positives = 28/64 (43%)
Query: 140 PVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYV 199
P+ IALYDY E+S D++T + + WW+ R G PA YV
Sbjct: 2 PLGSSDLGITAIALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGVCKGRYGLFPANYV 61
Query: 200 KKME 203
+ +
Sbjct: 62 ELRQ 65
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel,
ATP-binding, developmental protein, lipoprotein,
manganese, metal-binding; 1.60A {Gallus gallus} PDB:
2l2p_A
Length = 79
Score = 63.5 bits (155), Expect = 2e-12
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 150 VIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVE--VNDRQGFVPAAYVKKME 203
ALYDY ++ ++S K + +LNS+ DWW+ G++P+ Y+ ++
Sbjct: 8 FEALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSIYLAPVD 63
>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring
finger 2 containing protein, NPPSFA; NMR {Mus musculus}
Length = 70
Score = 63.0 bits (154), Expect = 2e-12
Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWK--VEVNDRQGFVPAAYVKKM 202
+ +AL+ Y+ P E+ ++K + + +L W K + R G P+ YV +
Sbjct: 5 SSGNMFVALHTYSAHRPEELDLQKGEGIRVLGKYQDGWLKGLSLLTGRTGIFPSDYVIPV 64
Query: 203 E 203
Sbjct: 65 S 65
>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Mus musculus}
Length = 81
Score = 63.6 bits (155), Expect = 2e-12
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLN--SNNKDWWKVEVNDRQGFVPAAYVKKM 202
+ LYDY + E+S+ +V+T+ + + DW E +++G VP Y++ +
Sbjct: 15 SNNRKARVLYDYDAANSTELSLLADEVITVFSVVGMDSDWLMGERGNQKGKVPITYLELL 74
Query: 203 EAG 205
+G
Sbjct: 75 NSG 77
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling
protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1
PDB: 1h92_A 1kik_A
Length = 62
Score = 62.7 bits (153), Expect = 2e-12
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 148 ECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVE--VNDRQGFVPAAYVKK 201
VIAL+ Y ++ +K + L +L + +WWK + ++GF+P +V K
Sbjct: 7 NLVIALHSYEPSHDGDLGFEKGEQLRILEQSG-EWWKAQSLTTGQEGFIPFNFVAK 61
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide);
1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A
1m30_A 1m3b_A 1m3a_A
Length = 57
Score = 62.5 bits (153), Expect = 2e-12
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 148 ECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVE-VNDRQGFVPAAYVKK 201
E V AL+D+ ++ KK D+L + + + WW E ++G +P YV+K
Sbjct: 2 EYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK 56
>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding,
signaling, HCK SH3 domain, PR binding; 3.45A {Homo
sapiens}
Length = 90
Score = 63.6 bits (155), Expect = 2e-12
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 147 KECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVE--VNDRQGFVPAAYVKKMEA 204
V+ALYDY SP ++S +K D + +L + +WWK ++G++P+ YV ++++
Sbjct: 3 DIIVVALYDYVSWSPDDLSFQKGDQMVVLEESG-EWWKARSLATRKEGYIPSNYVARVDS 61
Query: 205 GLTAS 209
G S
Sbjct: 62 GGGTS 66
>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 73
Score = 62.7 bits (153), Expect = 2e-12
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKD--WWKVEVNDRQGFVPAAYVKKM 202
+ +A Y++ + RE+S+++ DV+ + + D WWK E N R G+ P+ YV++
Sbjct: 5 SSGGTAVARYNFAARDMRELSLREGDVVRIYSRIGGDQGWWKGETNGRIGWFPSTYVEEE 64
Query: 203 EA 204
Sbjct: 65 GI 66
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB:
2o31_A 2o9v_A 2o2w_A
Length = 67
Score = 62.3 bits (152), Expect = 3e-12
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 149 CVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVN--DRQGFVPAAYVKKME 203
IA +++ + E+S +K + +TLL +++W++ + RQG P YV ++
Sbjct: 8 EAIAKFNFNGDTQVEMSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVIK 64
>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate
repeat-containing protein, structural genomics, NPPSFA;
NMR {Homo sapiens} PDB: 2kea_A
Length = 73
Score = 62.8 bits (153), Expect = 3e-12
Identities = 11/65 (16%), Positives = 28/65 (43%)
Query: 144 VTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKME 203
G+ V + + + +KK D++ +++ W +N++ G YV +
Sbjct: 8 FCGRARVHTDFTPSPYDTDSLKLKKGDIIDIISKPPMGTWMGLLNNKVGTFKFIYVDVLS 67
Query: 204 AGLTA 208
+G ++
Sbjct: 68 SGPSS 72
>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural
genomics, riken structural genomics/proteomics
initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Length = 93
Score = 62.9 bits (153), Expect = 4e-12
Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKD--WWKVEVNDRQGFVPAAYVKKM 202
+G ALY + ++ E+S D++ + + W G+ P YV+KM
Sbjct: 3 SGSSGYRALYPFEARNHDEMSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEKM 62
Query: 203 EA 204
+
Sbjct: 63 PS 64
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor
protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Length = 58
Score = 61.8 bits (151), Expect = 4e-12
Identities = 12/55 (21%), Positives = 31/55 (56%)
Query: 149 CVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKME 203
I +DY + E+++ +++T + + WW+ ++N R+G P +V++++
Sbjct: 3 EAIVEFDYQAQHDDELTISVGEIITNIRKEDGGWWEGQINGRRGLFPDNFVREIK 57
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3
domain/complex, adaptor protein (MONA); 1.5A {Mus
musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A
2d0n_A
Length = 58
Score = 61.4 bits (150), Expect = 4e-12
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 148 ECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKM 202
ALYD+ E+ + +V+ +L+S+N WW ++++ G PA YV M
Sbjct: 2 RWARALYDFEALEEDELGFRSGEVVEVLDSSNPSWWTGRLHNKLGLFPANYVAPM 56
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3
domain, sturctural genomics, structural genomics; 1.39A
{Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A
2a08_A
Length = 60
Score = 61.4 bits (150), Expect = 4e-12
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 146 GKECVIALYDYTEKSPREVSMKKSDVLTLLNS--NNKDWWKVEVNDRQGFVPAAYVKKM 202
+ALY + + ++ +K DV+T+L + DWW VN R+G PA YV+ +
Sbjct: 2 SSPKAVALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYVELV 60
>1i07_A Epidermal growth factor receptor kinase substrate EPS8;
hormone/growth factor; 1.80A {Mus musculus} SCOP:
b.34.2.1 PDB: 1aoj_A 1i0c_A
Length = 60
Score = 61.5 bits (150), Expect = 4e-12
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 147 KECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVE-VNDRQGFVPAAYVKKME 203
K+ + YD+ ++ E+S+ K DVL +L+ + + WWKV + GFVP + M
Sbjct: 1 KKYAKSKYDFVARNSSELSVMKDDVLEILD-DRRQWWKVRNASGDSGFVPNNILDIMR 57
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 70.3 bits (171), Expect = 5e-12
Identities = 98/784 (12%), Positives = 221/784 (28%), Gaps = 256/784 (32%)
Query: 835 IKKHQLVEADIQAH--DDRIKDMNGQADSLIDSGQFDASSIQEKRQSI--NERYERIKNL 890
+HQ DI + D + + FD +Q+ +SI E + I
Sbjct: 11 TGEHQYQYKDILSVFEDAFVDN-------------FDCKDVQDMPKSILSKEEIDHIIM- 56
Query: 891 AAHRQARL---------NEANTLHQFFRDIADEE-SWIKEKKLLVGSDDYGRDLTGVQNL 940
+ + + + +F ++ ++ +
Sbjct: 57 SKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSP------------------I 98
Query: 941 KKKHKRLEAELASHQPAIQNVQETGEKLMDVSNLGVPEIEQRLKLLNQAWSEL------- 993
K + ++ + + + + V ++ LKL QA EL
Sbjct: 99 KTEQRQPSMMTRMYIEQRDRLYNDNQVF---AKYNVSRLQPYLKL-RQALLELRPAKNVL 154
Query: 994 --------KQ-LAAN--RGQKLDESLTYQHFLAKVEEEEAWISEKQQLLSVEDYGDTMAA 1042
K +A + K+ + ++ F W++ K +
Sbjct: 155 IDGVLGSGKTWVALDVCLSYKVQCKMDFKIF---------WLNLKN----CNSPETVLEM 201
Query: 1043 VQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEAKNHHADSITQRCQQLQLKLDNLMAL 1102
+Q LL + D +++ H+ +I R +Q +L L+
Sbjct: 202 LQKLLYQID---------------------PNWTSRSDHSSNIKLRIHSIQAELRRLLKS 240
Query: 1103 ATKRKTKL-MDNSAYLQFMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDA 1161
L + N + A ++ +LS + LLT T
Sbjct: 241 KPYENCLLVLLN------VQNAKAWNAF---------------NLS-CKILLT---TRFK 275
Query: 1162 GLHAFEHEGIQNITTLKDQLVASNHDQTPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQ 1221
+ F +L + D+ ++ + ++ L
Sbjct: 276 QVTDFLSAATTTHISLDHHSMTLTPDEVKSL-------LLKY--------------LDC- 313
Query: 1222 EQFRQIEDLYLTFAKKASSFNKPQPLSRDM--EMSLQDGRSYLEIPMPGNNVFSASSFNS 1279
+ +DL ++ + N P + E ++DG +++++
Sbjct: 314 ----RPQDL----PREVLTTN---PRRLSIIAES-IRDGL---------------ATWDN 346
Query: 1280 WFENAEEDLTDPVRCNSIE-----EIRALREAHAQFQASLSSAQADFEALAALDQQIKSF 1334
W + LT + +S+ E R + F+ L+ + F
Sbjct: 347 WKHVNCDKLTTIIE-SSLNVLEPAEYRKM-----------------FDRLS-----V--F 381
Query: 1335 NVGPNPYTWFTMEALEDTWRNLQKIIKERDIELAKEATRQDENDALRKEFAKHANAFHQW 1394
L W ++ + D+ N + + +
Sbjct: 382 PPS----AHIPTILLSLIWFDV----IKSDVM-------VVVNKLHKYSLVE------KQ 420
Query: 1395 LTETRTSMMEGTGSLEQQLEAIKRKAAEVRSRRSDLKKIEDLGAILEEHLILDNRYTEH- 1453
E+ S+ L+ +LE + + K D ++ + LD + H
Sbjct: 421 PKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTF-DSDDLIPPY--LDQYFYSHI 477
Query: 1454 ----STVGLAQQWDQLDQ--LGMR-MQHNLEQQIQARNQSGVSEDALKEFSMMFKHFDKD 1506
+ ++ L R ++ + A N SG + L++ +
Sbjct: 478 GHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICD- 536
Query: 1507 KSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISK 1566
N +++ + A+ LP +EE ++ DL+ ++L + +
Sbjct: 537 -----NDPKYERLVNAILDFLPKIEENLICSKY---TDLL------RIALMAEDEAIFEE 582
Query: 1567 ETRQ 1570
+Q
Sbjct: 583 AHKQ 586
Score = 69.5 bits (169), Expect = 8e-12
Identities = 99/707 (14%), Positives = 202/707 (28%), Gaps = 207/707 (29%)
Query: 581 VKDLPYFSKKDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHED------FDKAINA 634
V + DC+ ++ ++ L+ EE+D ++ K F ++
Sbjct: 30 VDNF------DCKDVQDMP---KSILSKEEID------HIIMSKDAVSGTLRLFWTLLSK 74
Query: 635 HEEKIGALQTLADQLIAADH-YAAKPIDDKRKQVLDRWRLLKEALIEKRSRL-GESQTLQ 692
EE +Q ++++ ++ + PI +++Q ++ IE+R RL ++Q
Sbjct: 75 QEE---MVQKFVEEVLRINYKFLMSPIKTEQRQP----SMMTRMYIEQRDRLYNDNQVFA 127
Query: 693 QFSRDADEMENWIAEKLQLATEESY----------KD--PANIQSKHQKHQAFEAEL--- 737
+++ + + + L K ++ ++ + ++
Sbjct: 128 KYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWL 187
Query: 738 -AANADRIQSVLAMGQNL---IDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLK 793
N + ++VL M Q L ID S+ + +L + +L+
Sbjct: 188 NLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKL------------RIHSIQAELR 235
Query: 794 EANKQRTYIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIKKHQLVEADIQAHDDRIK 853
K + Y LL L +VQN K
Sbjct: 236 RLLKSKPY-------------ENCLL-------VLLNVQN--AKA-------------WN 260
Query: 854 DMNGQADSLI---DSGQFDA-SSIQEKRQSINERYERIKNLAAHRQARLNEANTLHQFFR 909
N L+ D S+ S++ H L
Sbjct: 261 AFNLSCKILLTTRFKQVTDFLSAATTTHISLD-----------HHSMTLTPDEVKSLL-- 307
Query: 910 DIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQPA-IQNVQETG-EK 967
K L D R++ + AE A N + +K
Sbjct: 308 ----------LKYLDCRPQDLPREVLTTNPR---RLSIIAESIRDGLATWDNWKHVNCDK 354
Query: 968 LMDVSNLGVPEIEQRLKLLNQAWSELKQLAANRGQKLDESLTYQHFLAKVEEEEAWISEK 1027
L + IE L +L A E +++ + V A I
Sbjct: 355 LTTI-------IESSLNVLEPA--EYRKM-------------FDRL--SVFPPSAHIPT- 389
Query: 1028 QQLLSV----EDYGDTMAAVQGLLKK----HDAFETDFSVHRDRCADICSAGNKLIEAKN 1079
LLS+ D M V L K E+ S+ ++ KL
Sbjct: 390 -ILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIP-SIYLELKV---KLENEYA 444
Query: 1080 HHADSITQRCQQLQLKLDNLMA--------------LATKRKTKLMD--NSAYLQFMWKA 1123
H + D+L+ L + M +L F
Sbjct: 445 LHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDF---- 500
Query: 1124 DVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGI--QNITTLKDQL 1181
++ K H + ++ L + + + + +++ + + + D L
Sbjct: 501 ----RFLEQKIRHDSTAWNAS--GSILNTLQQLKFYKP--YICDNDPKYERLVNAILDFL 552
Query: 1182 VASNHDQTPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFRQIE 1228
+ I ++ D++ L+ + A +E +Q++
Sbjct: 553 PKIEEN---LICSKYTDLLRI--ALMAEDEA------IFEEAHKQVQ 588
Score = 62.6 bits (151), Expect = 1e-09
Identities = 94/684 (13%), Positives = 196/684 (28%), Gaps = 194/684 (28%)
Query: 90 EQFLEHYGKD------EDSSEALLKKHEALVSDLEAFGNTILGLREQAQSCRQQETPVID 143
F + + + +D +++L K E + + + + G + ++ ++
Sbjct: 23 SVFEDAFVDNFDCKDVQDMPKSILSKEE--IDHIIMSKDAVSGTLRLFWTLLSKQEEMVQ 80
Query: 144 VTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKME 203
+E + Y + + + S + + + ND Q F
Sbjct: 81 KFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLY----NDNQVFAK-------- 128
Query: 204 AGLTASQQNLADVKEVKILETANDIQERREQVLNRYADFKSEARSKREKLEDITV----- 258
N++ ++ L A + E R +++ +
Sbjct: 129 -------YNVSRLQPYLKLRQA--LLELRPA-------------------KNVLIDGVLG 160
Query: 259 --KEVKILETANDIQERREQVLNR---YADFKSEARSKREKLEDSRRFQYFKRDADELES 313
K L+ + + ++ + + K+ S LE ++ Y
Sbjct: 161 SGKTWVALDVCLS--YKVQCKMDFKIFWLNLKNC-NSPETVLEMLQKLLYQ--------- 208
Query: 314 WIYEKLQAASDESYKETTNLQAKIQKHQAFEAEVAAHSNAIVVLDNTGNDFYRDCEQAEN 373
I + SD S + + + + + N ++VL N N A+
Sbjct: 209 -IDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS-KPYENCLLVLLNVQN--------AKA 258
Query: 374 WMSAREAFLNAEEVDSKT----------DNVEALIKKH---EDFDKAINAHEEKIGALQT 420
W AF + K D + A H + + E
Sbjct: 259 W----NAF----NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE----VKSL 306
Query: 421 LADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSR-DADEMEN 479
L Y D ++VL + ++I + R G + T + + D++
Sbjct: 307 LLK-------YLDCRPQDLPREVLTT-NPRRLSIIAESIRDGLA-TWDNWKHVNCDKLTT 357
Query: 480 WIAEKL-QLATEE---SYKD----P--ANIQSKH-----QKHQAFEAELAANADRIQSVL 524
I L L E + P A+I + + + N S
Sbjct: 358 IIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS-- 415
Query: 525 AMGQNLIDKRQCVGSEEAVQARLASIAD-QWEFLTQKTTEKSL--KLKEA-NKQRTY--- 577
L++K+ SI E + E +L + + N +T+
Sbjct: 416 -----LVEKQPK--------ESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSD 462
Query: 578 -IAAVKDLPYFSK------KDCEQAENWMSAREAFLNAEEVDSK-------------TDN 617
+ YF K+ E E R FL+ ++ K N
Sbjct: 463 DLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILN 522
Query: 618 VEALIKKHEDF-DKAINAHEEKIGA----LQTLADQLIAADHYAAKPIDDKRKQVLDRWR 672
+K ++ + +E + A L + + LI + +
Sbjct: 523 TLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYT----------------D 566
Query: 673 LLKEALIEKRSRLGESQTLQQFSR 696
LL+ AL+ + + E + +Q R
Sbjct: 567 LLRIALMAEDEAIFE-EAHKQVQR 589
Score = 61.8 bits (149), Expect = 2e-09
Identities = 88/651 (13%), Positives = 181/651 (27%), Gaps = 203/651 (31%)
Query: 944 HKRLEAELASHQPAIQNVQETGEKLMDVSNLGVPEIEQRLK-LLNQAWSELKQLAANRGQ 1002
H ++ E HQ +++ E V N +++ K +L++ E+ +
Sbjct: 4 HHHMDFETGEHQYQYKDILSVFEDAF-VDNFDCKDVQDMPKSILSKE--EIDHII---MS 57
Query: 1003 KLDESLTYQHFLAKVEEEEAWISEKQQLLSVE---------DYGDTMAAVQGLLKKHDAF 1053
K S T + F W +Q V+ +Y M+ ++ ++
Sbjct: 58 KDAVSGTLRLF---------WTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMM 108
Query: 1054 ETDFSVHRDRCADICSAGNKLIEAKNHHADSITQRCQQLQLKLDNL----------M--- 1100
+ RDR + + + ++ S Q +L+ L L +
Sbjct: 109 TRMYIEQRDR---LYNDNQVFAK---YNV-SRLQPYLKLRQALLELRPAKNVLIDGVLGS 161
Query: 1101 --------ALATKRKTKLMDNSAYLQFMWKADVVESWIADKETHVKSEEYGRDLSTVQTL 1152
+ + MD + W+ S L
Sbjct: 162 GKTWVALDVCLSYKVQCKMDFKIF------------WL----------NLKNCNSPETVL 199
Query: 1153 LTKQETFDAGLHAFEHEGIQNITTLKDQLVASNHDQTPAIVKRHGDVIARWQKLLGDSNA 1212
E +Q + D S D + I R + A ++LL
Sbjct: 200 ----------------EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP- 242
Query: 1213 RKQRLLRMQEQFRQIEDLYLTFAKKASSFN-KPQPL--SRDMEMSLQ-DGRSYLEIPM-P 1267
+ LL + +++ AK ++FN + L +R +++ + I +
Sbjct: 243 YENCLLVL----LNVQN-----AKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDH 293
Query: 1268 GNNVF----SASSFNSWFENAEEDLTDPVRCNSIEEIRALREAHAQFQASLSSAQADFEA 1323
+ S + + +DL P RE LS
Sbjct: 294 HSMTLTPDEVKSLLLKYLDCRPQDL--P------------REVLTTNPRRLSI------- 332
Query: 1324 LAALDQQIKSFNVGPNPYTWFTMEALEDTWRNLQKIIKERDIELAKEATRQDENDALRKE 1383
+A + TW D W+++ IE + E +
Sbjct: 333 IAESIRD--------GLATW-------DNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDR 377
Query: 1384 FA---KHANAFHQ-----WLTETRTSMMEGTGSLEQQLEAIKRKAAEVRSRRSDLKKIED 1435
+ A+ W ++ +M L + ++++ E I
Sbjct: 378 LSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS-LVEKQPKESTIS------IPS 430
Query: 1436 LGAILEEHLILDNRYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNQSGVSEDALKE 1495
+ LE + L+N Y H ++ +D + + + L +
Sbjct: 431 I--YLELKVKLENEYALHRSI--------VDHY---------NIPKTFDSDDLIPPYLDQ 471
Query: 1496 FSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAI-LDL 1545
+ + H +G+ L +E + F + LD
Sbjct: 472 YF--YSH--------------------IGHHLKNIEHPERMTLFRMVFLDF 500
Score = 47.5 bits (112), Expect = 3e-05
Identities = 49/369 (13%), Positives = 97/369 (26%), Gaps = 119/369 (32%)
Query: 1250 DMEMSLQDGRSYLEIPMPGNNVFSASSFNSWFENAEEDLTDPVRCNSIEEIRALREAHAQ 1309
D E Y +I + VF E+ D C ++++ +
Sbjct: 8 DFETGEHQ-YQYKDI-LS---VF------------EDAFVDNFDCKDVQDM--PKSI--- 45
Query: 1310 FQASLSSAQAD--FEALAALDQQIKSFNV----GPNPYTWFTMEALEDTWRNLQKIIKER 1363
LS + D + A+ ++ F F E L ++ L IK
Sbjct: 46 ----LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTE 101
Query: 1364 DIELAKEATR--------QDENDALRKEF---AKHANAFHQWLTETRTSM------MEGT 1406
+ + ++N K + Q L E R + + G+
Sbjct: 102 QRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGS 161
Query: 1407 G--SLEQQLEAIKRKAAEVRSRRSDLKKIED------LGAILEEHLILDNRYTEHSTVGL 1458
G + A +V K++ L +L+
Sbjct: 162 GKTWV----------ALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLE----------- 200
Query: 1459 AQQWDQLDQLGMRMQHNLEQQI-QARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFK 1517
L +L ++ N + + N E + K ++
Sbjct: 201 -----MLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS-----------KPYE 244
Query: 1518 SCLRALGYDLPMVEEGQPDPE----FE------------AILDLVDPNRDGHVSLQEYMA 1561
+CL L + V+ + + F + D + H+SL +
Sbjct: 245 NCLLVLL-N---VQ----NAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSM 296
Query: 1562 FMISKETRQ 1570
+ E +
Sbjct: 297 TLTPDEVKS 305
>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR
{Homo sapiens}
Length = 92
Score = 62.5 bits (152), Expect = 5e-12
Identities = 12/70 (17%), Positives = 32/70 (45%)
Query: 135 RQQETPVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFV 194
+Q T + + Y ++ E+ +K D++ ++ + WW+ +N + G
Sbjct: 6 QQMGTNKRGERRRRRCQVAFSYLPQNDDELELKVGDIIEVVGEVEEGWWEGVLNGKTGMF 65
Query: 195 PAAYVKKMEA 204
P+ ++K++
Sbjct: 66 PSNFIKELSG 75
>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; NMR {Homo sapiens}
Length = 72
Score = 62.0 bits (151), Expect = 5e-12
Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 150 VIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVND-----RQGFVPAAYVKKME 203
+ L+D+ ++ E+S + DV + + WW +++ QG+VP Y+ + E
Sbjct: 13 YVGLWDFKSRTDEELSFRAGDVFHVARKEEQWWWATLLDEAGGAVAQGYVPHNYLAERE 71
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1;
SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB:
1ywp_A 1ywo_A
Length = 61
Score = 61.5 bits (150), Expect = 5e-12
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFV-PAAYVKKME 203
T K V AL+DY + E++ KS ++ + + WW+ + ++ P+ YV++M
Sbjct: 1 TFKSAVKALFDYKAQREDELTFTKSAIIQNVEKQDGGWWRGDYGGKKQLWFPSNYVEEMI 60
>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine
kinase, signal transduction, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 88
Score = 62.5 bits (152), Expect = 5e-12
Identities = 11/59 (18%), Positives = 25/59 (42%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKME 203
++Y + E+S+ K + ++ + WW+ N + G+ P+ YV +
Sbjct: 15 DLNMPAYVKFNYMAEREDELSLIKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYVTEEG 73
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2;
STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early
endosome, signaling protein/signaling protein complex;
1.70A {Mus musculus} SCOP: b.34.2.1
Length = 62
Score = 61.1 bits (149), Expect = 6e-12
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 150 VIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVK 200
V ALYD+ E++ K +++T+L+ ++ +WW+ E + G P+ +V
Sbjct: 8 VRALYDFEAVEDNELTFKHGELITVLDDSDANWWQGENHRGTGLFPSNFVT 58
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP:
b.34.2.1
Length = 71
Score = 61.5 bits (150), Expect = 6e-12
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 150 VIALYDYTEKSPREVSMKKSDVLTLLN-SNNKDWWKVEVND-RQGFVPAAYVKKMEA 204
IA Y++ + +++ K DVLT++ + + +W+K + R+G +PA YV+K E
Sbjct: 14 CIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREG 70
>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput,
structural genomics, contractIle protein; 1.80A
{Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A
Length = 69
Score = 61.6 bits (150), Expect = 6e-12
Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 147 KECVIALYDYT-EKSPREVSMKKSDVLTLLNSNNKDWWKVEV--NDRQGFVPAAYVKKME 203
A YD+ S E+ +KK D++ + W ++ ++G+VP AY+ +
Sbjct: 2 DPKFEAAYDFPGSGSSSELPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPYK 61
>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine
proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C*
4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 1fyn_A
1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C*
1qwe_A 1qwf_A 1prl_C ...
Length = 84
Score = 62.0 bits (151), Expect = 7e-12
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVE--VNDRQGFVPAAYVKKM 202
+G +ALYDY ++S K + +L DWW+ G++P+ YV +
Sbjct: 4 SGVTLFVALYDYNATRWTDLSFHKGEKFQILEFGPGDWWEARSLTTGETGYIPSNYVAPV 63
Query: 203 E 203
+
Sbjct: 64 D 64
>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Mus musculus}
Length = 69
Score = 61.1 bits (149), Expect = 7e-12
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDR-QGFVPAAYVKKME 203
+ V ALYDY K E++ + ++ ++ WWK + R Q + P+ YV+ +
Sbjct: 5 SSGRTVKALYDYKAKRSDELTFCRGALIHNVSKEPGGWWKGDYGTRIQQYFPSNYVEDIS 64
Query: 204 A 204
Sbjct: 65 G 65
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm,
phosphorylation, SH3-binding, signaling protein; NMR
{Mus musculus} PDB: 2kro_A
Length = 64
Score = 61.1 bits (149), Expect = 7e-12
Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 146 GKECVIALYDYTEKSPREVSMKKSDVLTLLN--SNNKDWWKVEVNDRQGFVPAAYVKKM 202
KE L+ YT + E++ ++ +++ L++ + WWK E+N ++G P + ++
Sbjct: 5 AKEYCRTLFPYTGTNEDELTFREGEIIHLISKETGEAGWWKGELNGKEGVFPDNFAVQI 63
>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm,
cytoskeleton, SH3 domain, SIG protein; NMR
{Saccharomyces cerevisiae} PDB: 2rqw_A
Length = 108
Score = 62.5 bits (152), Expect = 8e-12
Identities = 21/101 (20%), Positives = 41/101 (40%), Gaps = 13/101 (12%)
Query: 151 IALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDR---QGFVPAAYVK--KMEAG 205
I LYD+ + E++ + L + +N +W+ + R G VP +V + G
Sbjct: 9 IVLYDFKAEKADELTTYVGENLFICAHHNCEWFIAKPIGRLGGPGLVPVGFVSIIDIATG 68
Query: 206 LTASQQNLADVKEVKILETANDIQERREQVLNRYADFKSEA 246
+ D+K V + +QE + + A +K+
Sbjct: 69 YATGNDVIEDIKSVNL----PTVQEWKSNI----ARYKASN 101
>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase,
oxidoreductase; HET: CAF; 3.15A {Homo sapiens}
Length = 341
Score = 67.7 bits (164), Expect = 8e-12
Identities = 30/133 (22%), Positives = 49/133 (36%), Gaps = 2/133 (1%)
Query: 128 REQAQSCRQQETPVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEV 187
R + + +D AL+D+T S E++ K DV+ LL+ NKDW + V
Sbjct: 155 RTRKVKSVSPQGNSVDRMAAPRAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTV 214
Query: 188 NDRQGFVPAAYVKKME--AGLTASQQNLADVKEVKILETANDIQERREQVLNRYADFKSE 245
G P ++VK ++ L + T DI + E
Sbjct: 215 RGATGIFPLSFVKILKDFPEEDDPTNWLRCYYYEDTISTIKDIAVEEDLSSTPLLKDLLE 274
Query: 246 ARSKREKLEDITV 258
+ + EDI +
Sbjct: 275 LTRREFQREDIAL 287
>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR
{Homo sapiens}
Length = 65
Score = 60.7 bits (148), Expect = 9e-12
Identities = 13/54 (24%), Positives = 30/54 (55%)
Query: 150 VIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKME 203
L++Y ++ E+ +K D++ + + WW +N++ G P+ +VK++E
Sbjct: 4 CKVLFEYIPQNEDELELKVGDIIDINEEVEEGWWSGTLNNKLGLFPSNFVKELE 57
>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1
GTPase-activating protein...; GTPase activation,
membrane, metal-binding, SH3 domain; NMR {Homo sapiens}
PDB: 2rqt_A 2rqu_A
Length = 76
Score = 60.8 bits (148), Expect = 1e-11
Identities = 11/62 (17%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVN---DRQGFVPAAYVKK 201
V +YD + E++ + +V+ + +++WW + +R+G P ++V
Sbjct: 8 NKVRRVKTIYDCQADNDDELTFIEGEVIIVTGEEDQEWWIGHIEGQPERKGVFPVSFVHI 67
Query: 202 ME 203
+
Sbjct: 68 LS 69
>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal
transduction, riken structural genomics/proteomics
initiative, RSGI; NMR {Homo sapiens}
Length = 91
Score = 61.3 bits (149), Expect = 1e-11
Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLN--SNNKDWWKVE-VNDRQGFVPAAYVKK 201
V LY ++ + E++ +K + + ++ N+ +WWK + + G VP YV
Sbjct: 15 RVLHVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVV 74
Query: 202 ME 203
+
Sbjct: 75 LS 76
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein;
2.05A {Homo sapiens} PDB: 2k6d_A
Length = 69
Score = 60.4 bits (147), Expect = 1e-11
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 146 GKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKD--WWKVEVNDRQGFVPAAYVKKME 203
+ ++ Y ++ E+++K+ D++TL+N + D WW+ E+N R+G P +VK +
Sbjct: 1 ASDYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLLP 60
>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 78
Score = 60.4 bits (147), Expect = 2e-11
Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 150 VIALYDYTEKSPREVSMKKSDVLTLLN-SNNKDWWKVE-VNDRQGFVPAAYVKKMEAGLT 207
+Y Y P E+++++ +VL ++ + +DW K + G+VP Y++ +
Sbjct: 16 CKVVYSYKASQPDELTIEEHEVLEVIEDGDMEDWVKARNKVGQVGYVPEKYLQFPTSSGP 75
Query: 208 AS 209
+S
Sbjct: 76 SS 77
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A
{Saccharomyces cerevisiae} PDB: 1yp5_A
Length = 58
Score = 59.5 bits (145), Expect = 2e-11
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 150 VIALYDYT-EKSPREVSMKKSDVLTLLNSNNKDWWKVEVND--RQGFVPAAYVKK 201
A YD+ SP E+ +KK DV+ + W ++ D ++G+VP AY+K
Sbjct: 3 FEAAYDFPGSGSPSELPLKKGDVIYITREEPSGWSLGKLLDGSKEGWVPTAYMKP 57
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor
protein, downregulation, CBL, apoptosis, junction,
cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Length = 73
Score = 60.0 bits (146), Expect = 2e-11
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 147 KECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKD--WWKVEVNDRQGFVPAAYVKKMEA 204
K+ ++ Y ++ E+++K+ D++TL+N + D WW+ E+N R+G P +VK +
Sbjct: 9 KDYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLLPP 68
>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein,
structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
SCOP: b.34.2.1
Length = 72
Score = 60.0 bits (146), Expect = 2e-11
Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLN-SNNKDWWKVEVNDRQGFVPAAYVKKME 203
T ALY + E+S V ++ S W + +N + G +P YV+ +
Sbjct: 8 TPFRKAKALYACKAEHDSELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVEFLS 67
Query: 204 A 204
Sbjct: 68 G 68
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein,
structural protein; 1.30A {Saccharomyces cerevisiae}
SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Length = 58
Score = 59.5 bits (145), Expect = 2e-11
Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 149 CVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWK--VEVNDRQGFVPAAYVK 200
A YDY E++ ++D + + + DWW +E + +G P+ YV
Sbjct: 2 WATAEYDYDAAEDNELTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVS 55
>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13,
protein-protein interaction, structural genomics; NMR
{Mus musculus}
Length = 93
Score = 60.6 bits (147), Expect = 2e-11
Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 5/73 (6%)
Query: 133 SCRQQETPVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLN----SNNKDWWKVEVN 188
S A YD+ S E+S + D+L L + W ++
Sbjct: 3 SGSSGTNWASGEDDHVVARAEYDFVAVSDEEISFRAGDMLNLALKEQQPKVRGWLLASLD 62
Query: 189 DR-QGFVPAAYVK 200
+ G +PA YVK
Sbjct: 63 GQTTGLIPANYVK 75
>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on
protein structural and functional analyses; NMR {Homo
sapiens}
Length = 88
Score = 60.2 bits (146), Expect = 3e-11
Identities = 12/54 (22%), Positives = 23/54 (42%)
Query: 150 VIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKME 203
I ++++ D++ + N W+ EVN R+G P +VK +
Sbjct: 21 AIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEGEVNGRKGLFPFTHVKIFD 74
>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR,
CDC42P-interacting, S signaling protein; NMR
{Lodderomyces elongisporus}
Length = 120
Score = 61.5 bits (149), Expect = 3e-11
Identities = 12/81 (14%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 150 VIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDR---QGFVPAAYVKKMEAGL 206
+ LY++ + E+ + + L++ + +W+ + +R G VP +YV+ ++
Sbjct: 6 AVTLYEFKAERDDELDVSPGENLSICAHYDYEWFIAKPINRLGGPGLVPVSYVRIIDLMD 65
Query: 207 TASQQNLADVKEVKILETAND 227
A ++ ++++ ++
Sbjct: 66 PAKYASVDTYDREQVMKIIDE 86
>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project
on protein structural and functional analyses; NMR {Homo
sapiens}
Length = 70
Score = 59.6 bits (145), Expect = 3e-11
Identities = 10/62 (16%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWK--VEVNDRQGFVPAAYVKKM 202
+ A+Y Y ++ E+ +++ D + ++ + W+ + G P YV +
Sbjct: 5 SSGTPYRAMYQYRPQNEDELELREGDRVDVMQQCDDGWFVGVSRRTQKFGTFPGNYVAPV 64
Query: 203 EA 204
Sbjct: 65 SG 66
>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 97
Score = 60.3 bits (146), Expect = 3e-11
Identities = 15/84 (17%), Positives = 32/84 (38%), Gaps = 9/84 (10%)
Query: 131 AQSCRQQETPVIDVTGKECVIALYDYTEKSPR--------EVSMKKSDVLTLLNSNNKD- 181
S P + +AL+DY + E+ K+ ++ + + D
Sbjct: 1 GSSGSSGTDPGAEELPARIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDADG 60
Query: 182 WWKVEVNDRQGFVPAAYVKKMEAG 205
+++ E R G +P V +++A
Sbjct: 61 FYRGETCARLGLIPCNMVSEIQAD 84
>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase;
NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A
Length = 71
Score = 59.2 bits (144), Expect = 4e-11
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFV-PAAYVKKME 203
T K V AL+DY + E++ KS ++ + WW+ + ++ P+ YV++M
Sbjct: 4 TFKCAVKALFDYKAQREDELTFIKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEMV 63
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2,
protei binding, chronic myeloid leukemia; 1.53A {Homo
sapiens}
Length = 69
Score = 58.9 bits (143), Expect = 4e-11
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 148 ECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEV-NDRQGFVPAAYVKKME 203
V+ALYDYT E+++ + D++ + +N+DWW + ++G+ PA +V
Sbjct: 7 PTVVALYDYTANRSDELTIHRGDIIRVFFKDNEDWWYGSIGKGQEGYFPANHVASET 63
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP,
structural genomics, PSI; 1.95A {Leishmania major} SCOP:
a.39.1.8
Length = 191
Score = 62.3 bits (152), Expect = 6e-11
Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
Query: 1500 FKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEY 1559
F+ D G+L+ E ++ L + GY + + F+A++ D R G + +Y
Sbjct: 99 FRKRDSSGDGRLDSNEVRAALLSSGYQV-------SEQTFQALMRKFDRQRRGSLGFDDY 151
Query: 1560 MAFMISKET 1568
+ I
Sbjct: 152 VELSIFVCR 160
Score = 56.5 bits (137), Expect = 7e-09
Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 7/95 (7%)
Query: 1473 QHNLEQQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEE 1532
H++ S + +E F+ D D SG ++ E + L + G
Sbjct: 6 HHHMPTSTGVYAPSARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPF----- 60
Query: 1533 GQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISKE 1567
E +L + D N G ++ E+
Sbjct: 61 --SLATTEKLLHMYDKNHSGEITFDEFKDLHHFIL 93
Score = 32.3 bits (74), Expect = 0.80
Identities = 10/69 (14%), Positives = 20/69 (28%), Gaps = 14/69 (20%)
Query: 1495 EFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHV 1554
F + + FD+ + G L ++ + D R G V
Sbjct: 130 TFQALMRKFDRQRRGSLGFDDYVELSIFV------------CRVRNVF-AFYDRERTGQV 176
Query: 1555 SLQEYMAFM 1563
+ + F+
Sbjct: 177 TFT-FDTFI 184
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand,
phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Length = 204
Score = 62.0 bits (151), Expect = 9e-11
Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 12/96 (12%)
Query: 1471 RMQHNLEQQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMV 1530
L Q +R SG+ L F+ D+D S L+ EF+ L LG L
Sbjct: 19 ATMEKLRAQCLSRGASGIQG--LAR---FFRQLDRDGSRSLDADEFRQGLAKLGLVL--- 70
Query: 1531 EEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISK 1566
E E + D N G + L+E++ +
Sbjct: 71 ----DQAEAEGVCRKWDRNGSGTLDLEEFLRALRPP 102
Score = 52.0 bits (125), Expect = 2e-07
Identities = 14/76 (18%), Positives = 26/76 (34%), Gaps = 1/76 (1%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
S+ + F D+ G + + + + E D LD D
Sbjct: 104 SQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDS 163
Query: 1549 N-RDGHVSLQEYMAFM 1563
+ +DG V+L E+ +
Sbjct: 164 SEKDGQVTLAEFQDYY 179
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A;
EF-hand like, unknown function; 1.60A {Homo sapiens}
SCOP: a.39.1.7
Length = 105
Score = 59.0 bits (143), Expect = 1e-10
Identities = 16/94 (17%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 1478 QQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDP 1537
+ I AR V+ + F++FD K+ +++ EF++ L D
Sbjct: 9 RDILARLHKAVTSH-YHAITQEFENFDTMKTNTISREEFRAICNRRVQIL-------TDE 60
Query: 1538 EFEAILDLVDPNRDGHVSLQEYMAFMISKETRQN 1571
+F+ + + + N G + ++++ S+
Sbjct: 61 QFDRLWNEMPVNAKGRLKYPDFLSRFSSETAATP 94
>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel,
beta sheet, zinc finger, metal binding protein; NMR
{Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A
Length = 71
Score = 58.1 bits (141), Expect = 1e-10
Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 148 ECVIALYDYTEKSPREVSMKKSDVLTLLN--SNNKDWWKVE-VNDRQGFVPAAYVKKME 203
V LY ++ + E++ +K + + ++ N+ +WWK + + G VP YV +
Sbjct: 7 HVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLS 65
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling
protein; NMR {Homo sapiens}
Length = 67
Score = 57.7 bits (140), Expect = 1e-10
Identities = 8/61 (13%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 145 TGKECVIALYDYTEKS--PREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKM 202
G + + ++++ +++ + N W+ E N ++G P +V+ +
Sbjct: 4 NGPIYARVIQKRVPNAYDKTALALEVGELVKVTKINVSGQWEGECNGKRGHFPFTHVRLL 63
Query: 203 E 203
+
Sbjct: 64 D 64
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2
domain, SH3 zinc-finger, SH3- binding, UBL conjugation
pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A
2krm_A
Length = 62
Score = 57.6 bits (140), Expect = 1e-10
Identities = 13/56 (23%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 150 VIALYDYTEKSPREVSMKKSDVLTLLNSNNKD-WWKVEVNDRQGFVPAAYVKKMEA 204
I YDY E++++ +++ + ++ W + E+N R+G P +VK+++
Sbjct: 4 YIVEYDYDAVHDDELTIRVGEIIRNVKKLQEEGWLEGELNGRRGMFPDNFVKEIKR 59
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 64.8 bits (158), Expect = 1e-10
Identities = 15/70 (21%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 135 RQQETPVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLN-SNNKDWWKVEVNDRQGF 193
++ +ALYD+ +S+ K + L +L ++N +W + + + QG+
Sbjct: 31 KENLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGW 90
Query: 194 VPAAYVKKME 203
VP+ Y+ +
Sbjct: 91 VPSNYITPVN 100
>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces
cerevisiae}
Length = 54
Score = 57.1 bits (139), Expect = 1e-10
Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 150 VIALYDYTEKSPREVSMKKSDVLTLLNSNNKD-WWKVEVNDRQGFVPAAYVK 200
+ A+Y Y + E+S+ D++T++ ++ W E + +G P +Y K
Sbjct: 3 MEAIYAYEAQGDDEISIDPGDIITVIRGDDGSGWTYGECDGLKGLFPTSYCK 54
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces
cerevisiae} SCOP: b.34.2.1
Length = 58
Score = 57.2 bits (139), Expect = 1e-10
Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Query: 152 ALYDYTEKSPREVSMKKSDVLTLLNSNNKDWW---KVEVNDRQGFVPAAYVK 200
LY Y +K E+++ D ++L+ + W + G VP Y++
Sbjct: 6 VLYAYVQKDDDEITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIR 57
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural
genomics, protein structure initiative; NMR {Arabidopsis
thaliana} SCOP: a.39.1.5
Length = 67
Score = 57.1 bits (139), Expect = 2e-10
Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 7/72 (9%)
Query: 1495 EFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHV 1554
+F+ FDK+K GKL+ EF+ A + + +D + +G +
Sbjct: 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYF-------TQEDIVKFFEEIDVDGNGEL 54
Query: 1555 SLQEYMAFMISK 1566
+ E+ + +
Sbjct: 55 NADEFTSCIEKM 66
Score = 27.5 bits (62), Expect = 6.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 1494 KEFSMMFKHFDKDKSGKLNQTEFKSCLR 1521
++ F+ D D +G+LN EF SC+
Sbjct: 37 EDIVKFFEEIDVDGNGELNADEFTSCIE 64
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 75
Score = 57.0 bits (138), Expect = 2e-10
Identities = 12/66 (18%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 145 TGKECVIALYDYTEKSPR-------EVSMKKSDVLTLLNSNNKD-WWKVEVNDRQGFVPA 196
+ + +IA DY + ++++ DV+ + + ++ E+ +G VPA
Sbjct: 5 SSGKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMDDQGFYYGELGGHRGLVPA 64
Query: 197 AYVKKM 202
+ M
Sbjct: 65 HLLDHM 70
>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 76
Score = 57.4 bits (139), Expect = 2e-10
Identities = 17/67 (25%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 145 TGKECVIALYDYT--EKSPR-----EVSMKKSDVLTLLNSNNKD-WWKVEVNDRQGFVPA 196
+ ++ALYDY E SP E++ D++T+ ++D ++ E+N ++G VP+
Sbjct: 5 SSGRRMVALYDYDPRESSPNVDVEAELTFCTGDIITVFGEIDEDGFYYGELNGQKGLVPS 64
Query: 197 AYVKKME 203
+++++
Sbjct: 65 NFLEEVS 71
>2joj_A Centrin protein; N-terminal domain, centrin solution structure,
EF-hand calcium binding protein, cell cycle; NMR
{Euplotes octocarinatus}
Length = 77
Score = 57.1 bits (139), Expect = 2e-10
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
SE+ +E F FD +K+G ++ E K +RALG+D+ PE +++ D
Sbjct: 2 SEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDV-------KKPEILELMNEYDR 54
Query: 1549 NRDGHVSLQEYMAFMISK 1566
+G++ +++ M K
Sbjct: 55 EGNGYIGFDDFLDIMTEK 72
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export;
2.5A {Homo sapiens} PDB: 2bzx_A
Length = 67
Score = 56.9 bits (138), Expect = 2e-10
Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 149 CVIALYDYTEKS--PREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKME 203
A+ + ++++ D++ + N W+ EVN R+G P +VK +
Sbjct: 3 FAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEGEVNGRKGLFPFTHVKIFD 59
>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural
genomics, structural genomics consortium, SGC, BE
barrel; HET: EDT; 1.50A {Homo sapiens}
Length = 67
Score = 56.9 bits (138), Expect = 2e-10
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 145 TGKECVIALYDYT-EKSPREVSMKKSDVLTLLNSNNKDWW---KVEVNDRQGFVPAAYVK 200
+G+ V A++ + + +S K+ D++TLL +D W + E +G+ P +Y +
Sbjct: 5 SGRMRVKAIFSHAAGDNSTLLSFKEGDLITLLVPEARDGWHYGESEKTKMRGWFPFSYTR 64
Query: 201 KME 203
++
Sbjct: 65 VLD 67
>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13;
compact beta-barrel of five anti-parrallel beta-strands;
2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB:
1n5z_A
Length = 92
Score = 57.5 bits (139), Expect = 2e-10
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 136 QQETPVIDVTGKECVIALYDYTEKSPR-EVSMKKSDVLTLLN-----SNNKDWWKVEVND 189
+ + ID + E ALYD+ ++P EV++KK D++ +L+ + DWWKV +
Sbjct: 3 EFGSEPIDPSKLEFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKN 62
Query: 190 -RQGFVPAAYVKKME 203
G++P Y++ ++
Sbjct: 63 GNIGYIPYNYIEIIK 77
>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator,
P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 71
Score = 56.9 bits (138), Expect = 3e-10
Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Query: 145 TGKECVIALYDYT-EKSPREVSMKKSDVLTLLNSNNKDWWKVEV--NDRQGFVPAAYVKK 201
+ V A+ YT E+S K D+ + N W V D QG + V++
Sbjct: 5 SSGRRVRAILPYTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEE 64
Query: 202 ME 203
+
Sbjct: 65 VS 66
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME
binding protein-toxin complex; 2.20A {Chlamydomonas
reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Length = 169
Score = 59.5 bits (145), Expect = 4e-10
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 1478 QQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDP 1537
++ Q + + G++E+ +E F FD D SG ++ E K +RALG++
Sbjct: 12 RRDQKKGRVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEP-------KKE 64
Query: 1538 EFEAILDLVDPNRDGHVSLQEYMAFMISK 1566
E + ++ +D + G + +E++ M +K
Sbjct: 65 EIKKMISEIDKDGSGTIDFEEFLTMMTAK 93
Score = 53.4 bits (129), Expect = 5e-08
Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 7/74 (9%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN 1549
D+ +E F+ FD D SG + + + + LG E + E + ++ D N
Sbjct: 97 RDSREEILKAFRLFDDDNSGTITIKDLRRVAKELG-------ENLTEEELQEMIAEADRN 149
Query: 1550 RDGHVSLQEYMAFM 1563
D + E++ M
Sbjct: 150 DDNEIDEDEFIRIM 163
>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling
protein; 2.52A {Caenorhabditis elegans}
Length = 308
Score = 61.8 bits (149), Expect = 4e-10
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 150 VIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVE-VNDRQGFVPAAYVKKM 202
V+ + +T + ++ ++ + L +L+ N+DWW+ G VPA YV+
Sbjct: 150 VVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQIQ 203
Score = 55.6 bits (133), Expect = 5e-08
Identities = 12/75 (16%), Positives = 26/75 (34%)
Query: 130 QAQSCRQQETPVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVND 189
A + + K V P ++ +KK + + + +K E++
Sbjct: 232 SASTSSDNIELQPRLPAKAKVTFDRVPNAYDPTQLRVKKGQTVLVTQKMSNGMYKAELDG 291
Query: 190 RQGFVPAAYVKKMEA 204
+ G VP Y++
Sbjct: 292 QIGSVPHTYLRFTAV 306
>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling
protein; 2.01A {Caenorhabditis elegans}
Length = 174
Score = 59.4 bits (143), Expect = 5e-10
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 150 VIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVND-RQGFVPAAYVK 200
V+ + +T + ++ ++ + L +L+ N+DWW+ G VPA YV+
Sbjct: 121 VVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQ 172
>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Mus musculus}
Length = 77
Score = 55.8 bits (135), Expect = 7e-10
Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 150 VIALYDYT-EKSPREVSMKKSDVLTLLN-SNNKDWWKVEVND-RQGFVPAAYVKKMEA 204
+YD+ E E+++ + +++T+ N + W + + N QG VP YV+ +
Sbjct: 12 ARVMYDFAAEPGNNELTVTEGEIITVTNPNVGGGWLEGKNNKGEQGLVPTDYVEILPN 69
>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A
{Saccharomyces cerevisiae}
Length = 59
Score = 55.3 bits (134), Expect = 7e-10
Identities = 12/58 (20%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 148 ECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEV--NDRQGFVPAAYVKKME 203
+ +ALYD+ ++ E+ + + D++ + + + W E + G VP +V ++
Sbjct: 2 QRAVALYDFEPENDNELRLAEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYIQ 59
>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein;
NMR {Saccharomyces cerevisiae}
Length = 73
Score = 55.8 bits (135), Expect = 7e-10
Identities = 12/56 (21%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 150 VIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVE--VNDRQGFVPAAYVKKME 203
+ALYD+ ++ E+ + + D++ + + + W E + G VP +V ++
Sbjct: 8 AVALYDFEPENDNELRLAEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYIQ 63
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 62.1 bits (151), Expect = 7e-10
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 150 VIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVE--VNDRQGFVPAAYVKKME 203
+ALYDY ++ ++S KK + L ++N+ DWW + G++P+ YV +
Sbjct: 5 FVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSD 60
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 63.1 bits (153), Expect = 7e-10
Identities = 95/614 (15%), Positives = 164/614 (26%), Gaps = 230/614 (37%)
Query: 309 DELESWIYEKLQA-ASDESYKETTNLQAKIQKHQAFEAEVAAHSNAIVVLDNTGNDFYRD 367
++ + E + A+D+ L K + + E + VL+ +F
Sbjct: 35 EQFNKILPEPTEGFAADDEPTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENC 94
Query: 368 CEQAENWMSAREAFLNAEEVDS-----KTDNVEALIKKHE---DFDKAINAHEEKIG--- 416
+L ++ + +N L+K E ++ A +
Sbjct: 95 -------------YLEGNDIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKS 141
Query: 417 --ALQTLAD----QLIA-------ADHYAAKPIDDKRKQVL-DRWRLLKEALIEKRSRLG 462
AL QL+A D Y ++ R L + +L LI+
Sbjct: 142 NSALFRAVGEGNAQLVAIFGGQGNTDDY----FEELRD--LYQTYHVLVGDLIKF----- 190
Query: 463 ESQTLQQFSRDADEME----------NWIAEK---------------------LQLATEE 491
++TL + R + E W+ +QLA
Sbjct: 191 SAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLA--- 247
Query: 492 SYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEEAVQARLASIA 551
Y A + EL ++ Q L V A +
Sbjct: 248 HYVVTAKLLGFTP------GEL---RSYLKGATGHSQGL------------VTAVAIAET 286
Query: 552 DQWE-FLTQKTTEKSLKL-----KEANKQRTY------IAAVKDLPYFSKKDCEQAENWM 599
D WE F K++ + Y + ++D S ++ E + M
Sbjct: 287 DSWESFFVS--VRKAITVLFFIGVRC--YEAYPNTSLPPSILED----SLENNEGVPSPM 338
Query: 600 -SAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAH---EEKIG-ALQTLADQLIAADH 654
S + + V+ + K N+H +++ +L A L+ +
Sbjct: 339 LSIS---------NLTQEQVQDYVNK-------TNSHLPAGKQVEISLVNGAKNLVVSGP 382
Query: 655 YAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIAEKLQLATE 714
P L L L + ++ G Q+ FS KL+ +
Sbjct: 383 ----PQS------LYG---LNLTLRKAKAPSGLDQSRIPFSE----------RKLKFSNR 419
Query: 715 ---------ESYKDPANIQSKHQKHQAFEAELAANADRIQSV-LAM-------GQNLIDK 757
PA+ +L N + + + G +L
Sbjct: 420 FLPVASPFHSHLLVPAS--------DLINKDLVKNNVSFNAKDIQIPVYDTFDGSDL--- 468
Query: 758 RQCVGSEEAVQARLASIADQ-------WEFLTQKTTEKSLKLKEANKQRTYIAAVKDLDF 810
R GS I D WE TQ T+I LDF
Sbjct: 469 RVLSGSI------SERIVDCIIRLPVKWETTTQFKA-------------THI-----LDF 504
Query: 811 WLGEVESL--LTSE 822
G L LT
Sbjct: 505 GPGGASGLGVLTHR 518
Score = 54.7 bits (131), Expect = 3e-07
Identities = 65/378 (17%), Positives = 109/378 (28%), Gaps = 151/378 (39%)
Query: 520 IQSVLAMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANK--QRTY 577
Q MG +L S+ A D W A+ + TY
Sbjct: 1626 SQEQ-GMGMDLYKT-----SKAA--------QDVWN--------------RADNHFKDTY 1657
Query: 578 ----IAAVKDLP-----YFS-KKDCEQAENWMSAREAFLNAEEVDSKTDNVEALIKKHED 627
+ V + P +F +K EN+ A + VD K + + +E
Sbjct: 1658 GFSILDIVINNPVNLTIHFGGEKGKRIRENYS----AMIFETIVDGKLKTEKIFKEINEH 1713
Query: 628 FDKAINAHEEKIGAL-QTLADQ-LIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKR--- 682
E+ G L T Q + AA + LK +
Sbjct: 1714 STSYTFRSEK--GLLSATQFTQPALTLMEKAA-------------FEDLKSKGLIPADAT 1758
Query: 683 ----SRLGESQTLQQFSRDADEMENWIAEKLQLATEESYKDPANIQSKHQKHQAFEA--- 735
S LGE ++ A LA+ A++ S E+
Sbjct: 1759 FAGHS-LGE------YA----------A----LAS------LADVMS-------IESLVE 1784
Query: 736 ------ELAANA---DRI-QSVLAMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKT 785
A D + +S M + S+EA+Q + + ++T
Sbjct: 1785 VVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVG-------KRT 1837
Query: 786 TEKSLKLKE-AN-----KQRTYIAAVKDLDFWLGEVESLLTSEDSGKDLASVQNLIK--K 837
L E N +Q Y+AA G++ +L + +V N IK K
Sbjct: 1838 GW----LVEIVNYNVENQQ--YVAA--------GDLRAL-------DTVTNVLNFIKLQK 1876
Query: 838 HQLVEADIQAHDDRIKDM 855
++E + ++
Sbjct: 1877 IDIIELQKSLSLEEVEGH 1894
Score = 54.3 bits (130), Expect = 4e-07
Identities = 37/162 (22%), Positives = 56/162 (34%), Gaps = 54/162 (33%)
Query: 1420 AAEVRSRRSDLKKIEDLG-AILEEHLILDN--RYTEHSTVGLAQQWDQLDQLGMRMQHNL 1476
A +V R+D + G +IL+ ++++N T H + G R++ N
Sbjct: 1642 AQDVW-NRADNHFKDTYGFSILD--IVINNPVNLTIHFG----------GEKGKRIRENY 1688
Query: 1477 EQQIQARNQSG--VSEDALKEF-----SMMFKHFDKDKSGKLNQTEF---------KSCL 1520
I G +E KE S F+ +K G L+ T+F K+
Sbjct: 1689 SAMIFETIVDGKLKTEKIFKEINEHSTSYTFRS---EK-GLLSATQFTQPALTLMEKAAF 1744
Query: 1521 RALGYDLPMVEEG-QPDPEFEAILDLVDPNRDGHVSLQEYMA 1561
L +G P A GH SL EY A
Sbjct: 1745 EDLK------SKGLIPADATFA----------GH-SLGEYAA 1769
Score = 53.9 bits (129), Expect = 5e-07
Identities = 93/634 (14%), Positives = 161/634 (25%), Gaps = 264/634 (41%)
Query: 1041 AAVQGLLKKHDAFETDFSVHRDRCADICSAGNKLIEAKNHHADSITQRCQQLQLKLDNLM 1100
+ + L H + E V QLQ +
Sbjct: 4 YSTRPLTLSHGSLEHVLLV-----------------PTASFF-----IASQLQ---E--- 35
Query: 1101 ALATKRKTKLMDNSAYLQF-MWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQE-- 1157
QF + E + AD E +E G+ L V +L+ +
Sbjct: 36 -----------------QFNKILPEPTEGFAADDEPTTPAELVGKFLGYVSSLVEPSKVG 78
Query: 1158 TFD----AGLHAFEHEGIQ--NITTLKDQLVASNHDQTPAIVKRHGDVI-----ARWQKL 1206
FD L FE+ ++ +I L A + + + ++I AR
Sbjct: 79 QFDQVLNLCLTEFENCYLEGNDIHA----LAAKLLQENDTTLVKTKELIKNYITARIMAK 134
Query: 1207 LGDSNARKQRLLRMQE------------Q------FRQIEDLYLTFAKKASSFNKP--QP 1246
L R Q F ++ DLY T+
Sbjct: 135 RPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFEELRDLYQTY--------HVLVGD 186
Query: 1247 LSRDMEMSLQDGRSYLEIPMPGNNVFSAS-SFNSWFENAE----ED--LTDPVRCNSIEE 1299
L + +L + + VF+ + W EN +D L+ P+ C I
Sbjct: 187 LIKFSAETLS---ELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGV 243
Query: 1300 I---------RALREAHAQFQASLSS--------------AQAD----FEALAALDQQIK 1332
I + L + ++ L A+ D F +
Sbjct: 244 IQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITV- 302
Query: 1333 SFNVG-------PNPYTWFTMEALEDTWRN------------------LQKIIKERDIEL 1367
F +G PN ++ LED+ N +Q + + + L
Sbjct: 303 LFFIGVRCYEAYPNTSLPPSI--LEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHL 360
Query: 1368 AKEATRQDE----------------------NDALRKEFAKHA----------------- 1388
+Q E N LRK A
Sbjct: 361 PAG--KQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSN 418
Query: 1389 -----NA-FHQWLTETRTSMMEGTGSLEQQLEAIKRKAAEVRSRRSDLKKI--------E 1434
+ FH + ++ + + + + + D+ +I
Sbjct: 419 RFLPVASPFH-------SHLLVPA--SDLINKDLVKNNVSFNA--KDI-QIPVYDTFDGS 466
Query: 1435 DL----GAILEEH--LILDNRYTEHSTVGLAQQWDQLDQ----------------LGMRM 1472
DL G+I E I+ V +W+ Q LG+
Sbjct: 467 DLRVLSGSISERIVDCII------RLPV----KWETTTQFKATHILDFGPGGASGLGVLT 516
Query: 1473 QHNLE----QQIQARNQSGVSEDALKEFSMMFKH 1502
N + + I A +D ++ FK
Sbjct: 517 HRNKDGTGVRVIVAGTLDINPDD---DYG--FKQ 545
Score = 53.9 bits (129), Expect = 5e-07
Identities = 62/347 (17%), Positives = 106/347 (30%), Gaps = 128/347 (36%)
Query: 825 GKDLASVQNLIKKHQLV--EADIQAHDDRIKDMNGQADSLIDSGQFDASSIQ-----EKR 877
G DL + V AD H KD G S++D + ++ EK
Sbjct: 1632 GMDLYKTSKAAQD---VWNRAD--NH---FKDTYGF--SILDIVINNPVNLTIHFGGEKG 1681
Query: 878 QSINERYERIKNLAAHRQARLNEANTLHQFFRDIADEES----WIKEKKLLVGSDDYGRD 933
+ I E Y + + ++ + F++I +E S + EK LL
Sbjct: 1682 KRIRENYSAMI-----FETIVDGKLKTEKIFKEI-NEHSTSYTFRSEKGLL--------S 1727
Query: 934 LTGVQNLKKKHKRLEAELASHQPAI--------QNVQETGEKLMDV-----SNLG----- 975
T Q QPA+ ++++ G D S LG
Sbjct: 1728 AT--QFT--------------QPALTLMEKAAFEDLKSKGLIPADATFAGHS-LGEYAAL 1770
Query: 976 -----VPEIEQRLKLLNQAWSELKQLAANRGQKLDESLTYQHFLAKVEEEEAWISEKQQL 1030
V IE ++++ RG + + V +E S
Sbjct: 1771 ASLADVMSIESLVEVVFY-----------RGMTMQVA---------VPRDELGRS----- 1805
Query: 1031 LSVEDYGDTMAAVQ----GLLKKHDAFETDFSVHRDRCADICSAGNKLIEAKNHHADSIT 1086
+YG M A+ +A + + L+E N++ ++
Sbjct: 1806 ----NYG--MIAINPGRVAASFSQEALQ-------YVVERVGKRTGWLVEIVNYNVEN-- 1850
Query: 1087 QRCQQL----QLK-LDNLMALATKRKTKLMDNSAYLQFMWKADVVES 1128
QQ L+ LD + + K + +D LQ + VE
Sbjct: 1851 ---QQYVAAGDLRALDTVTNVLNFIKLQKIDIIE-LQKSLSLEEVEG 1893
Score = 52.4 bits (125), Expect = 1e-06
Identities = 86/621 (13%), Positives = 157/621 (25%), Gaps = 238/621 (38%)
Query: 709 LQLA---TEESYKDPANIQSKHQKHQA-FEAELAANADRIQSVLAMGQNLIDKRQCVGSE 764
L L+ E P + Q F L + + E
Sbjct: 9 LTLSHGSLEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAA---------------DDE 53
Query: 765 EAVQARLAS-----IADQWEFLTQKTTEKSLK--LKEANKQRTYIAAVKDLDFWLGEVES 817
A L ++ E ++ L L E + Y+ ++ +
Sbjct: 54 PTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEF--ENCYLEG--------NDIHA 103
Query: 818 LLTS--EDSGKDLASVQNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDSGQFDASSIQE 875
L +++ L + LIK + + A I A + + +++S + F A
Sbjct: 104 LAAKLLQENDTTLVKTKELIKNY--ITARIMAK----RPFDKKSNSAL----FRAVGEGN 153
Query: 876 KR-------QSINERY--E-R-------------IKNLAAHRQARLNEANTLHQFFRDIA 912
+ Q + Y E R IK A + + F
Sbjct: 154 AQLVAIFGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGL 213
Query: 913 DEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAELASHQ---PAIQNVQETGEKLM 969
+ W++ DY L S P I +Q
Sbjct: 214 NILEWLENPS-NTPDKDY--------------------LLSIPISCPLIGVIQ------- 245
Query: 970 DVSNLGVPEIEQRLKLLNQAWSELKQL---AANRGQKL------DESLTYQHFLAKVEEE 1020
+++ V KLL EL+ A Q L E+ +++ F V
Sbjct: 246 -LAHYVVT-----AKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSV--R 297
Query: 1021 EA-----WI-SEKQQLLS--------VEDYGDT-------MAAVQGLLKKHDAFETDFSV 1059
+A +I + +ED + M ++ L ++ V
Sbjct: 298 KAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQ--------V 349
Query: 1060 HRDRCADICSAGNKLIEAKNHHADSITQRCQQLQLKLDN-------------LMALAT-- 1104
+ N H + +Q+++ L N L L
Sbjct: 350 Q------------DYVNKTNSHLPA----GKQVEISLVNGAKNLVVSGPPQSLYGLNLTL 393
Query: 1105 -----------------KRKTKLMD---------NSAYLQFMWKA-DVVESWIADKETHV 1137
+RK K + +S L A D++ +
Sbjct: 394 RKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSHLLV---PASDLINKDLVKNNVSF 450
Query: 1138 KSEE-----Y----GRDLSTVQTLLTKQETFDAGLHAFEHEGIQNITTLK---DQLVASN 1185
+++ Y G DL + ++ + I L +
Sbjct: 451 NAKDIQIPVYDTFDGSDLRVLSGSIS-------------ERIVDCIIRLPVKWETTTQFK 497
Query: 1186 --H--DQTPAIVKRHGDVIAR 1202
H D P G + R
Sbjct: 498 ATHILDFGPGGASGLGVLTHR 518
Score = 48.1 bits (114), Expect = 3e-05
Identities = 55/308 (17%), Positives = 93/308 (30%), Gaps = 109/308 (35%)
Query: 1110 LMDNSAYLQFMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHE 1169
L S Q +W AD H K + YG + + T H
Sbjct: 1635 LYKTSKAAQDVWNR-------ADN--HFK-DTYGFSILDIVINNPVNLTI--------HF 1676
Query: 1170 GIQNITTLKDQLVASNHDQTPAIVKRHGDVIARWQKLLGDSNARKQRLLRMQEQFR-QIE 1228
G + K + + N+ I + D + +K+ + N FR +
Sbjct: 1677 GGE-----KGKRIRENYS--AMIFETIVDGKLKTEKIFKEINEHSTSYT-----FRSEKG 1724
Query: 1229 DLYLT-FAKKASSFNKPQPLSRDMEMS-LQDGRSYLEIPMPGNNVF---S---------- 1273
L T F QP ME + +D +S + +P + F S
Sbjct: 1725 LLSATQFT---------QPALTLMEKAAFEDLKS--KGLIPADATFAGHSLGEYAALASL 1773
Query: 1274 ASSFNSWFENAEEDLTDPVRCNSIEEIR--ALREAHAQFQASLS------------SAQA 1319
A + E L + V R ++ A + + S +A
Sbjct: 1774 ADVMS--IE----SLVEVVF------YRGMTMQVAVPRDELGRSNYGMIAINPGRVAASF 1821
Query: 1320 DFEALAALDQQIKS----------FNV--------GPNPYTWFTMEALEDTWRNLQKIIK 1361
EAL + +++ +NV G + AL DT N+ IK
Sbjct: 1822 SQEALQYVVERVGKRTGWLVEIVNYNVENQQYVAAG-------DLRAL-DTVTNVLNFIK 1873
Query: 1362 ERDIELAK 1369
+ I++ +
Sbjct: 1874 LQKIDIIE 1881
Score = 47.7 bits (113), Expect = 3e-05
Identities = 98/694 (14%), Positives = 192/694 (27%), Gaps = 247/694 (35%)
Query: 781 LTQKTTEKSLKLKEANKQRTYIAA--VKDLDF--WLGEVESLLTSEDSGKDLASVQNLIK 836
L+ + E L + A ++ A +++ F L E ++D + + L+
Sbjct: 11 LSHGSLEHVLLVPTA----SFFIASQLQE-QFNKILPEPTEGFAADD---EPTTPAELVG 62
Query: 837 K------HQLVEADIQAHDDRIKDMNGQADSLIDSGQ----FDASSIQEKRQSINERYER 886
K + + + D + + ++ G A +QE ++ + E
Sbjct: 63 KFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKEL 122
Query: 887 IKN--LAAHRQARLNEANTLHQFFRDIADEESWIKEKKLLV---G---SDDYGRDLTGVQ 938
IKN A R + + FR + + + +L+ G +DDY
Sbjct: 123 IKNYITARIMAKRPFDKKSNSALFRAVGEGNA-----QLVAIFGGQGNTDDY-------- 169
Query: 939 NLKKKHKRLEAELASHQPAIQNVQETGEKLMDVSNLGVPEIEQRLKLLNQAWSELKQLAA 998
E EL +++ +T + L+ + L +L
Sbjct: 170 --------FE-EL-------RDLYQTYH----------VLVGD---LIKFSAETLSELIR 200
Query: 999 NRGQKLDESLTYQHFLAKVEEEEAWISEKQQLLSVEDYGDTMAAVQ----GLLK-KHDAF 1053
LD + L W+ +DY + + G+++ H
Sbjct: 201 TT---LDAEKVFTQGL----NILEWLENPSNTPD-KDYLLS-IPISCPLIGVIQLAH--- 248
Query: 1054 ETDFSVHRDRCADICSAGNKLIEAKNHHADSITQRCQQLQLKLDNLMALATKRKTKLMDN 1113
+ V + T Q L + A+A
Sbjct: 249 ---YVV-------TAKLLGFTPGELRSYLKGATGHSQGL------VTAVAI--------- 283
Query: 1114 SAYLQFMWKADVVESWIADKETHVKSEEYGRDLSTVQTLLTKQETFDAGLHAFEHEGIQN 1173
+ D SW E + + T+L F G+
Sbjct: 284 AE-------TD---SW----------ESFFVSVRKAITVL-----FFIGVRC-------- 310
Query: 1174 ITTLKDQLVASNHDQTPAIVK---RHGDVIARWQKLLGDSNARKQRLLRMQEQFRQIEDL 1230
N P+I++ + + + +L SN ++ Q++
Sbjct: 311 ------YEAYPNTSLPPSILEDSLENNEGVPSP--MLSISNLTQE----------QVQ-- 350
Query: 1231 YLTFAKKASSFNKPQPLSRDMEMSLQDGRSYLEIPMPGNNVFSASSFNSWFENAEEDLTD 1290
+ N P + +E+SL +G N V ++
Sbjct: 351 -----DYVNKTNSHLPAGKQVEISLVNGAK--------NLV----------------VSG 381
Query: 1291 PVRCNSIEEI-RALREAHA-----QFQASLSSAQADF-----------------EALAAL 1327
P + S+ + LR+A A Q + S + F A +
Sbjct: 382 PPQ--SLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSHLLVPASDLI 439
Query: 1328 DQQIKSFNVGPNPYTWFTMEAL----EDT--WRNLQKIIKERDIELAKEATRQDEN-DAL 1380
++ + NV F + + DT +L+ + + R +
Sbjct: 440 NKDLVKNNVS------FNAKDIQIPVYDTFDGSDLRVLSGSISERIVDCIIRLPVKWETT 493
Query: 1381 RKEFAKHANAF-------HQWLTETRTSMMEGTG 1407
+ A H F LT +GTG
Sbjct: 494 TQFKATHILDFGPGGASGLGVLTH---RNKDGTG 524
Score = 46.2 bits (109), Expect = 1e-04
Identities = 54/348 (15%), Positives = 97/348 (27%), Gaps = 139/348 (39%)
Query: 47 GQLMSEDYGKDLTSVQNLQKKHALLEAD----VASHLDRIESVKAATE----------QF 92
GQ ++DY ++L ++L + + +L D A L + E ++
Sbjct: 162 GQGNTDDYFEEL---RDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEW 218
Query: 93 LE---------------------------HY-----------GKDEDSSEALLKKHEALV 114
LE HY G+ + + LV
Sbjct: 219 LENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLV 278
Query: 115 S--------DLEAFGN------TIL---GLREQAQSCRQQETPVIDVTG---KECVIALY 154
+ E+F T+L G+R C + P + ++ +
Sbjct: 279 TAVAIAETDSWESFFVSVRKAITVLFFIGVR-----C-YEAYPNTSLPPSILEDSL---- 328
Query: 155 DYTEKSPREVSM------KKSDVLTLLNSNNK---DWWKVE---VNDRQGFV----PAAY 198
+ E P M + V +N N +VE VN + V P +
Sbjct: 329 ENNEGVPS--PMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQS- 385
Query: 199 VKKMEAGLTASQQNLADVKEVKILETANDIQ------ERREQVLNRY----ADFKSE--A 246
L L K + D Q ER+ + NR+ + F S
Sbjct: 386 -------LYGLNLTLRKAKA----PSGLD-QSRIPFSERKLKFSNRFLPVASPFHSHLLV 433
Query: 247 RSKREKLEDITVKEVKI----L-------ETANDIQERREQVLNRYAD 283
+ +D+ V + +D++ + R D
Sbjct: 434 PASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVD 481
Score = 43.9 bits (103), Expect = 5e-04
Identities = 79/608 (12%), Positives = 160/608 (26%), Gaps = 228/608 (37%)
Query: 194 VPAA-YVKKMEAGLTASQQNLADVKE--VKILETANDIQERREQ------VLNRYADF-- 242
VP A + ASQ ++E KIL + ++ ++ ++ +
Sbjct: 22 VPTASFF-------IASQ-----LQEQFNKILPEPTEGFAADDEPTTPAELVGKFLGYVS 69
Query: 243 ----KSEARSKREKLEDITVK-EVKILETANDI--------------QERREQVLNRYAD 283
S+ + L + E LE NDI + ++++ Y
Sbjct: 70 SLVEPSKVGQFDQVLNLCLTEFENCYLEG-NDIHALAAKLLQENDTTLVKTKELIKNYIT 128
Query: 284 FKSEARSKREKLEDSRRFQ---------------------YFKRDADELESWIYEKLQAA 322
+ A+ +K +S F+ YF +EL +Y
Sbjct: 129 ARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYF----EELRD-LY------ 177
Query: 323 SDESYKETTNLQAKIQKH-QAFEAEVAAHSNAIVVLDNTGNDFYRDCEQAENWMSAREAF 381
++Y + I+ + + +A + W+
Sbjct: 178 --QTYH--VLVGDLIKFSAETLSELIRTTLDA--------EKVFTQGLNILEWLENPSNT 225
Query: 382 LNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHY--AAKPIDDK 439
+ + + S I + IG +Q LA HY AK +
Sbjct: 226 PDKDYLLS------IPI--------SCPL----IGVIQ-LA-------HYVVTAKLLGFT 259
Query: 440 RKQVLDRWR--------LLKEALIEKRSRLGESQTLQQFSRDADEMEN---WIAEKLQLA 488
++ + L+ I E+ + + F + +I + A
Sbjct: 260 PGELRSYLKGATGHSQGLVTAVAIA------ETDSWESFFVSVRKAITVLFFIGVRCYEA 313
Query: 489 TEESYKDPANIQS--KH-------------------QKH-QAFEAELAANADRIQSVLAM 526
+ P+ ++ ++ Q + + L A +++ L
Sbjct: 314 YPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAG-KQVEISLVN 372
Query: 527 GQNLIDKRQCV--G---SEEAVQARLASIA-----DQ-------------WEFLT----- 558
G + V G S + L DQ FL
Sbjct: 373 G-----AKNLVVSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPF 427
Query: 559 -----QKTTEKSLKLKEANKQRTYIAAVKDL--PYFSKKDCEQAENWMSAREAFLNAEEV 611
++ + + + KD+ P + D + R
Sbjct: 428 HSHLLVPASD---LINKDLVKNNVSFNAKDIQIPVYDTFD---GSDL---R------VLS 472
Query: 612 DSKTDN-VEALIKKHEDFDKAINAHEEKI-----GALQTLAD-----------QLIAADH 654
S ++ V+ +I+ ++ I G L ++I A
Sbjct: 473 GSISERIVDCIIRLPVKWETTTQFKATHILDFGPGGASGLGVLTHRNKDGTGVRVIVAGT 532
Query: 655 YAAKPIDD 662
P DD
Sbjct: 533 LDINPDDD 540
Score = 38.9 bits (90), Expect = 0.018
Identities = 54/345 (15%), Positives = 96/345 (27%), Gaps = 143/345 (41%)
Query: 26 SQQQGFNRTIEDIELWLSEIEGQLMSEDYGKDL--TSVQNLQKKHALLEADVASHL-DRI 82
SQ+QG M G DL TS A + +R
Sbjct: 1626 SQEQG-------------------M----GMDLYKTS-------------KAAQDVWNR- 1648
Query: 83 ESVKAATEQFLEHYG-------KDEDSSEALL---KKHEALVSDLEAFGNTILGLREQAQ 132
A F + YG + + + +K + + + A + E
Sbjct: 1649 -----ADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRENYSAM------IFETIV 1697
Query: 133 SCRQQETPVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNS-NN------------ 179
+ + + KE YT +S + LL++
Sbjct: 1698 DGKLKTEKIF----KEINEHSTSYTFRSEKG----------LLSATQFTQPALTLMEKAA 1743
Query: 180 -KDWWKVEVNDRQGFVPA-AYVKKMEAG--------LTASQQNLADVKE----VKIL--- 222
+D +G +PA A AG L + LADV V+++
Sbjct: 1744 FEDLKS------KGLIPADATF----AGHSLGEYAALAS----LADVMSIESLVEVVFYR 1789
Query: 223 -ETANDIQERREQVLNRYADF-----KSEARSKREKLEDITVKEV-----KILETANDIQ 271
T R E + Y + A +E L+ + V+ V ++E N
Sbjct: 1790 GMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYV-VERVGKRTGWLVEIVNY-N 1847
Query: 272 ERREQV-----------LNRYADFKSEARSKREKLEDSRRFQYFK 305
+Q + +F + +L+ S + +
Sbjct: 1848 VENQQYVAAGDLRALDTVTNVLNFIKLQKIDIIELQKSLSLEEVE 1892
Score = 37.0 bits (85), Expect = 0.060
Identities = 82/547 (14%), Positives = 150/547 (27%), Gaps = 181/547 (33%)
Query: 626 EDFDKAINAHEEKIGALQTLADQL-IAAD--HYAAKPIDDKRKQVLDRWRLLKEALIEKR 682
E F+K + E A + Y + ++ + D+ +L L
Sbjct: 35 EQFNKILPEPTEGFAADDEPTTPAELVGKFLGYVSSLVEPSKVGQFDQ--VLNLCL---- 88
Query: 683 SRLGESQTLQQFSRDADEMENWIAEKLQLATEESYKDPANIQSKHQKHQAFEAELAANAD 742
+F E Y + +I H A A+L D
Sbjct: 89 ---------TEF-------------------ENCYLEGNDI------H-ALAAKLLQEND 113
Query: 743 ----RIQSVLAMGQNLIDKRQCVGSE----------EAVQARLASIADQWEFLTQKTTEK 788
+ + ++ +N I R AV A + F Q T+
Sbjct: 114 TTLVKTKELI---KNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAI--FGGQGNTDD 168
Query: 789 SLK-LKEANKQRTYIAAVKDLDFWLGEVESLL-----TSEDSGKDLASVQNLIKKHQLVE 842
+ L++ +TY V DL + L T+ D+ K N+ + +E
Sbjct: 169 YFEELRDL--YQTYHVLVGDL---IKFSAETLSELIRTTLDAEKVFTQGLNI---LEWLE 220
Query: 843 ADIQAHDDRIKDMNGQADS--LIDSGQFDASSIQEKRQSIN--ERYERIKNLAAHRQ--- 895
D + S LI Q + K E +K H Q
Sbjct: 221 NPSNTPDKDY--LLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLV 278
Query: 896 -ARLNEANTLHQFFRDIADEESWIKEKKLLVGSDDYGRDLTGVQNLKKKHKRLEAE---- 950
A IA+ +SW + + +++K +
Sbjct: 279 TAVA------------IAETDSW----------ESF------FVSVRKA---ITVLFFIG 307
Query: 951 LASHQ--------PAI-QNVQETGEKL---M-DVSNLGVPEIEQRLKLLNQAWSELKQLA 997
+ ++ P+I ++ E E + M +SNL +++ + N KQ+
Sbjct: 308 VRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVE 367
Query: 998 A---NRGQKL-----DESLTYQHFLAKVEEEEAWISEKQ--------------QLLSV-- 1033
N + L +SL + + +A Q + L V
Sbjct: 368 ISLVNGAKNLVVSGPPQSL--YGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVAS 425
Query: 1034 ---EDYGDTMAAVQGLLKKHDAFETDFSVHRDRCA----------DICSAGNKLIEAKNH 1080
+ L+ K D + + S + D+ + E
Sbjct: 426 PFHSHL---LVPASDLINK-DLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISER--- 478
Query: 1081 HADSITQ 1087
D I +
Sbjct: 479 IVDCIIR 485
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein,
solution structure, backbone dynamic, structural
genomics; NMR {Homo sapiens}
Length = 71
Score = 55.6 bits (135), Expect = 8e-10
Identities = 17/78 (21%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
+ L++ + F+ FD+D G + E + + LG + P E +A++ D
Sbjct: 1 ARAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLG-------QPLPQEELDAMIREADV 53
Query: 1549 NRDGHVSLQEYMAFMISK 1566
++DG V+ +E+ + +
Sbjct: 54 DQDGRVNYEEFARMLAQE 71
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding
domain, structural genomics, structural genomics
consortium, SGC; 2.30A {Homo sapiens}
Length = 91
Score = 56.2 bits (136), Expect = 8e-10
Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 9/91 (9%)
Query: 1473 QHNLEQQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEE 1532
H+ ++ + + L +F D ++SG+L + EF++ L
Sbjct: 6 HHSSGRENLYFQGADGDGEELARLRSVFAACDANRSGRLEREEFRALCTEL--------- 56
Query: 1533 GQPDPEFEAILDLVDPNRDGHVSLQEYMAFM 1563
+ EA+ +D +RDG ++ QE+
Sbjct: 57 RVRPADAEAVFQRLDADRDGAITFQEFARGF 87
Score = 29.6 bits (67), Expect = 1.8
Identities = 7/36 (19%), Positives = 12/36 (33%), Gaps = 3/36 (8%)
Query: 1487 GVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRA 1522
V + +F+ D D+ G + EF
Sbjct: 57 RVRPADAEA---VFQRLDADRDGAITFQEFARGFLG 89
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding
protein, metal binding protein; NMR {Branchiostoma
lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Length = 81
Score = 55.6 bits (135), Expect = 8e-10
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 1488 VSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVD 1547
V +D +E FK FD + G ++ EFK ++ +G EE D E E + D
Sbjct: 2 VRQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVG------EEPLTDAEVEEAMKEAD 55
Query: 1548 PNRDGHVSLQEYMAFMISK 1566
+ +G + + E+M +
Sbjct: 56 EDGNGVIDIPEFMDLIKKS 74
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping,
EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB:
1h4b_A
Length = 86
Score = 55.7 bits (135), Expect = 9e-10
Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 10/79 (12%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDP-EFEAILDLVD 1547
+ + + +FK FD + GK++ +E L+ L G P E ++ +D
Sbjct: 6 TPQDIADRERIFKRFDTNGDGKISSSELGDALKTL---------GSVTPDEVRRMMAEID 56
Query: 1548 PNRDGHVSLQEYMAFMISK 1566
+ DG +S E+ F +
Sbjct: 57 TDGDGFISFDEFTDFARAN 75
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide
compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB:
3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Length = 143
Score = 57.5 bits (140), Expect = 1e-09
Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
+E+ +E F FD D +G ++ E K +RALG++ E + ++ +D
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEP-------KKEEIKKMISEIDK 53
Query: 1549 NRDGHVSLQEYMAFMISK 1566
G ++ +++ M K
Sbjct: 54 EGTGKMNFGDFLTVMTQK 71
Score = 51.7 bits (125), Expect = 1e-07
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN 1549
+D +E FK FD D++GK++ K + LG E D E + ++D D +
Sbjct: 75 KDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-------ENLTDEELQEMIDEADRD 127
Query: 1550 RDGHVSLQEYMAFM 1563
DG VS QE++ M
Sbjct: 128 GDGEVSEQEFLRIM 141
>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P,
import machine, SH3 domain, protein transport; NMR
{Saccharomyces cerevisiae} SCOP: b.34.2.1
Length = 69
Score = 55.1 bits (133), Expect = 1e-09
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 7/61 (11%)
Query: 147 KECVIALYDYTEKSPR-EVSMKKSDVLTLLN-----SNNKDWWKVEVND-RQGFVPAAYV 199
ALYD+ ++P EV++KK D++ +L+ + DWWKV + G++P Y+
Sbjct: 7 HHFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYI 66
Query: 200 K 200
+
Sbjct: 67 E 67
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus
norvegicus} PDB: 2g9b_A
Length = 263
Score = 59.9 bits (145), Expect = 1e-09
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDL-PMVEEGQPDPEFEAILDLVDP 1548
+ +EF ++ +D D SG + E K+ L+ L V++ + + +L L D
Sbjct: 99 LKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDS 158
Query: 1549 NRDGHVSLQEYMAFMISKE 1567
N DG + L E + +E
Sbjct: 159 NNDGKLELTEMARLLPVQE 177
Score = 57.6 bits (139), Expect = 7e-09
Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Query: 1481 QARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFE 1540
A + S +F ++ HFD D SG L E ++ ++ L + PE +
Sbjct: 3 MAESHLQSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKK-AGLELSPEMK 61
Query: 1541 AILDLVDPNRDGHVSLQEYMAFMISKE 1567
+D DG + + E + ++E
Sbjct: 62 TFVDQYGQRDDGKIGIVELAHVLPTEE 88
Score = 49.5 bits (118), Expect = 3e-06
Identities = 14/92 (15%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Query: 1476 LEQQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQP 1535
L Q + + KEF+ F+ +D+D +G +++ E + L+ L +E
Sbjct: 173 LPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLC--EKNKQELDI 230
Query: 1536 DPEFEAILDLVDPNRDGHVSLQEYMAFMISKE 1567
+ +++ + G + + + + +
Sbjct: 231 NNISTYKKNIMALSDGGKLYRTDLALILSAGD 262
Score = 36.8 bits (85), Expect = 0.041
Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
Query: 1472 MQHNLEQQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVE 1531
+++ L+ ++ N++ + +M K FD + GKL TE L L +
Sbjct: 125 LKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQ 184
Query: 1532 -EGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMIS 1565
EF +L D + +G++ E A +
Sbjct: 185 GIKMCGKEFNKAFELYDQDGNGYIDENELDALLKD 219
Score = 34.5 bits (79), Expect = 0.20
Identities = 13/84 (15%), Positives = 23/84 (27%), Gaps = 2/84 (2%)
Query: 1484 NQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDP--EFEA 1541
+ + E + + GK+ E L L + Q EF
Sbjct: 48 ARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMK 107
Query: 1542 ILDLVDPNRDGHVSLQEYMAFMIS 1565
D + G + +E F+
Sbjct: 108 TWRKYDTDHSGFIETEELKNFLKD 131
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium
binding protein, apoptosis, calcium, endoplasmic
reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB:
2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Length = 172
Score = 58.0 bits (141), Expect = 1e-09
Identities = 15/76 (19%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 1493 LKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDG 1552
+ ++ +F+ +D+D SG +++ E K L GY L D + ++ D G
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRL-------SDQFHDILIRKFDRQGRG 125
Query: 1553 HVSLQEYMAFMISKET 1568
++ +++ I +
Sbjct: 126 QIAFDDFIQGCIVLQR 141
Score = 47.6 bits (114), Expect = 4e-06
Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 9/78 (11%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN 1549
+ L +F+ DKD+SG ++ TE + L + P +I+ + D
Sbjct: 6 QSFLWN---VFQRVDKDRSGVISDTELQQALSNGTWT-PFNPV-----TVRSIISMFDRE 56
Query: 1550 RDGHVSLQEYMAFMISKE 1567
V+ E+
Sbjct: 57 NKAGVNFSEFTGVWKYIT 74
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast,
SH3 domain, structural genomics, contractIle protein;
0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Length = 68
Score = 55.0 bits (133), Expect = 1e-09
Identities = 10/56 (17%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Query: 150 VIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVND-----RQGFVPAAYVK 200
V+A + Y +++ +K + + + + +W+ E D +G P ++V
Sbjct: 10 VVAQFPYKSDYEDDLNFEKDQEIIVTSVEDAEWYFGEYQDSNGDVIEGIFPKSFVA 65
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo
sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Length = 153
Score = 57.5 bits (140), Expect = 1e-09
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
+ ++E F+ FDKDK G +N + +C+R +GY + E + ++
Sbjct: 6 RPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMP-------TEMELIELSQQINM 58
Query: 1549 NRDGHVSLQEYMAFMISK 1566
N GHV +++ M K
Sbjct: 59 NLGGHVDFDDFVELMGPK 76
Score = 48.7 bits (117), Expect = 1e-06
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 1478 QQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRA-LGYDLPMVEEGQPD 1536
++ A + L++ F+ FD + G+++ +E + +RA LG+ +
Sbjct: 75 PKLLAETADMIGVKELRD---AFREFDTNGDGEISTSELREAMRALLGHQVG-------H 124
Query: 1537 PEFEAILDLVDPNRDGHVSLQEYMAFM 1563
+ E I+ VD N DG V +E++ M
Sbjct: 125 RDIEEIIRDVDLNGDGRVDFEEFVRMM 151
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP:
a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A
1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A
2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Length = 162
Score = 57.6 bits (140), Expect = 1e-09
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 1481 QARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFE 1540
QA ++ +SE+ + EF F FD D G ++ E + +R LG + E +
Sbjct: 7 QAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP-------TKEELD 59
Query: 1541 AILDLVDPNRDGHVSLQEYMAFMISK 1566
AI++ VD + G + +E++ M+ +
Sbjct: 60 AIIEEVDEDGSGTIDFEEFLVMMVRQ 85
Score = 52.2 bits (126), Expect = 1e-07
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
+ +E + F+ FDK+ G ++ E LRA G E + + E ++ D
Sbjct: 91 KGKSEEELANCFRIFDKNADGFIDIEELGEILRATG-------EHVTEEDIEDLMKDSDK 143
Query: 1549 NRDGHVSLQEYMAFM 1563
N DG + E++ M
Sbjct: 144 NNDGRIDFDEFLKMM 158
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand,
helix-loop-helix, calcium-binding, calmodulin
superfamily, transferase, plant protein; NMR {Glycine
max} SCOP: a.39.1.5
Length = 87
Score = 55.2 bits (134), Expect = 1e-09
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
SE+ + +FK D D SG + E K L+ +G +L + E + ++D D
Sbjct: 18 SEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSEL-------MESEIKDLMDAADI 70
Query: 1549 NRDGHVSLQEYMAFMI 1564
++ G + E++A +
Sbjct: 71 DKSGTIDYGEFIAATV 86
>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N
protein 1; endocytosis, N-WAsp, dynamin, pacsin I,
transferase; 2.64A {Mus musculus} PDB: 2x3x_D
Length = 60
Score = 54.5 bits (132), Expect = 1e-09
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 149 CVIALYDYTEKSPREVSMKKSDVLTLLN-SNNKDWWKVEVND-RQGFVPAAYVKKM 202
V ALYDY + E+S K D LT L + + W + ++ + G PA YV+ +
Sbjct: 5 RVRALYDYDGQEQDELSFKAGDELTKLGEEDEQGWCRGRLDSGQLGLYPANYVEAI 60
>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein,
protein binding; NMR {Homo sapiens}
Length = 83
Score = 54.9 bits (132), Expect = 2e-09
Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Query: 135 RQQETPVIDVTGKECVIALYDYTEKS-PREVSMKKSDVLTLLNSNNKDWWKVEVND---- 189
+ + G V AL D+ P ++++ DV+T+L + WK +++
Sbjct: 6 HHHHSSGLVPRGSLKVRALKDFWNLHDPTALNVRAGDVITVLEQHPDGRWKGHIHESQRG 65
Query: 190 --RQGFVPAAYVKKME 203
R G+ P V+ +
Sbjct: 66 TDRIGYFPPGIVEVVS 81
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured
protein, CAM-like; NMR {Entamoeba histolytica} PDB:
2lc5_A
Length = 85
Score = 55.0 bits (133), Expect = 2e-09
Identities = 17/85 (20%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Query: 1482 ARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEA 1541
+ + ++ + +E+ F+ FDKD KL E + +RALG + +
Sbjct: 2 SEQKKVLTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANP-------TKQKISE 54
Query: 1542 ILDLVDPNRDGHVSLQEYMAFMISK 1566
I+ D + G + ++ M+
Sbjct: 55 IVKDYDKDNSGKFDQETFLTIMLEY 79
>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1;
IRTKS-SH3, espfu, complex structure, protein binding;
NMR {Homo sapiens}
Length = 67
Score = 53.9 bits (130), Expect = 2e-09
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 145 TGKECVIALYDYT-EKSPREVSMKKSDVLTLLNSNNKD-WW--KVEVNDRQGFVPAAYVK 200
K+ V ++ +T + +S + DV+TLL KD W + +V+ +G+ P++Y K
Sbjct: 4 MKKQKVKTIFPHTAGSNKTLLSFAQGDVITLLIPEEKDGWLYGEHDVSKARGWFPSSYTK 63
Query: 201 KME 203
+E
Sbjct: 64 LLE 66
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal
binding protein; NMR {Entamoeba histolytica} SCOP:
a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Length = 134
Score = 56.0 bits (136), Expect = 2e-09
Identities = 12/74 (16%), Positives = 26/74 (35%), Gaps = 10/74 (13%)
Query: 1493 LKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDG 1552
+ +FK D + G ++ E K+ + + + I +D + +G
Sbjct: 2 AEA---LFKEIDVNGDGAVSYEEVKAFVSKKRAIK-------NEQLLQLIFKSIDADGNG 51
Query: 1553 HVSLQEYMAFMISK 1566
+ E+ F S
Sbjct: 52 EIDQNEFAKFYGSI 65
Score = 49.8 bits (120), Expect = 4e-07
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 14/76 (18%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
+ LK ++K D D GKL + E S + G + + + D
Sbjct: 73 DKIGLKV---LYKLMDVDGDGKLTKEEVTSFFKKHGIE-----------KVAEQVMKADA 118
Query: 1549 NRDGHVSLQEYMAFMI 1564
N DG+++L+E++ F +
Sbjct: 119 NGDGYITLEEFLEFSL 134
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle,
cell division, mitosis, MR transport, nuclear pore
complex, nucleus, phosphoprotein; 2.50A {Saccharomyces
cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A
Length = 161
Score = 56.8 bits (138), Expect = 3e-09
Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 7/78 (8%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
E+ +E F FD + G L+ E K ++ALG++L P E ++D D
Sbjct: 18 LEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFEL-------PKREILDLIDEYDS 70
Query: 1549 NRDGHVSLQEYMAFMISK 1566
+ ++ M K
Sbjct: 71 EGRHLMKYDDFYIVMGEK 88
Score = 51.8 bits (125), Expect = 2e-07
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN 1549
D L E F+ FD D +GK++ + + LG E D E A+++ D +
Sbjct: 92 RDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELG-------ETLTDEELRAMIEEFDLD 144
Query: 1550 RDGHVSLQEYMAFM 1563
DG ++ E++A
Sbjct: 145 GDGEINENEFIAIC 158
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence,
southeast collabora structural genomics, secsg,
structural genomics, PSI; HET: CTZ; 1.72A {Renilla
muelleri} PDB: 2hq8_A
Length = 186
Score = 57.4 bits (139), Expect = 3e-09
Identities = 24/140 (17%), Positives = 51/140 (36%), Gaps = 12/140 (8%)
Query: 1429 DLKKIEDLGAILEEHLILDNRYTEHSTVGLAQQWDQLDQLG-----MRMQHNLEQQIQAR 1483
+ E + + + L E + + DQL + +
Sbjct: 32 SREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVNATDSLLK 91
Query: 1484 NQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAIL 1543
+ A+ + +M+ D DK G ++ EFK+ L+A+G D +
Sbjct: 92 MKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVG-------PDLTDDKAITCF 144
Query: 1544 DLVDPNRDGHVSLQEYMAFM 1563
+ +D N++G +S E++ +
Sbjct: 145 NTLDFNKNGQISRDEFLVTV 164
Score = 53.2 bits (128), Expect = 6e-08
Identities = 9/83 (10%), Positives = 26/83 (31%), Gaps = 2/83 (2%)
Query: 1486 SGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEG--QPDPEFEAIL 1543
L++ + D G +++ +++ + + E + EF +
Sbjct: 6 ESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVA 65
Query: 1544 DLVDPNRDGHVSLQEYMAFMISK 1566
D + +S++E
Sbjct: 66 DQLGLAPGVRISVEEAAVNATDS 88
Score = 30.5 bits (69), Expect = 3.0
Identities = 7/40 (17%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Query: 1487 GVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYD 1526
+++D F D +K+G++++ EF + +
Sbjct: 134 DLTDDKAIT---CFNTLDFNKNGQISRDEFLVTVNDFLFG 170
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free
energy, dynamic behaviour, cytoskeleton, metal binding;
2.50A {Entamoeba histolytica}
Length = 66
Score = 53.7 bits (130), Expect = 3e-09
Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 7/67 (10%)
Query: 1499 MFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQE 1558
+FK D + G ++ E K+ + + + I +D + +G + E
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIK-------NEQLLQLIFKSIDADGNGEIDQNE 57
Query: 1559 YMAFMIS 1565
+ F S
Sbjct: 58 FAKFYGS 64
Score = 31.4 bits (72), Expect = 0.25
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 1494 KEFSMMFKHFDKDKSGKLNQTEFKSCLRAL 1523
+ ++FK D D +G+++Q EF ++
Sbjct: 36 QLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65
>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3
domain, five-stranded barrel, mouse cDNA; NMR {Mus
musculus} SCOP: b.34.2.1
Length = 72
Score = 53.9 bits (130), Expect = 4e-09
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 145 TGKECVIALYDYT-EKSPREVSMKKSDVLTLLNSNNKD-WWK--VEVNDRQGFVPAAYVK 200
+ + V ++ +T + +S + DVLTLL KD W + +G+ P++Y K
Sbjct: 5 SSGQKVKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTK 64
Query: 201 KME 203
+
Sbjct: 65 LLS 67
>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide
COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A
Length = 64
Score = 53.4 bits (129), Expect = 4e-09
Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 144 VTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWK--VEVNDRQGFVPAAYVKK 201
+ A+YDY+ + EVS + D + + + W V+ R G +PA Y++
Sbjct: 3 MANLRTYRAMYDYSAQDEDEVSFRDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPANYIEF 62
Query: 202 M 202
+
Sbjct: 63 V 63
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural
genomics, joint CENT structural genomics, JCSG, protein
structure initiative; HET: MLY; 2.20A {Homo sapiens}
PDB: 2frw_A 2js0_A
Length = 58
Score = 53.3 bits (128), Expect = 4e-09
Identities = 11/55 (20%), Positives = 24/55 (43%)
Query: 149 CVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKME 203
+ Y + E+S+ +T++ + WW+ N + G+ P+ YV +
Sbjct: 3 PAFVXFAYVAEREDELSLVXGSRVTVMEXCSDGWWRGSYNGQIGWFPSNYVLEEV 57
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand,
helix-loop- helix, nervous system, metal binding protein;
NMR {Haemopis marmorata} PDB: 1yx8_A
Length = 83
Score = 53.8 bits (130), Expect = 4e-09
Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
+ E FK D + G + E ++ + L + + + ++ + D
Sbjct: 2 ACKVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKAL-SKDKVKEASAKLIKMADK 60
Query: 1549 NRDGHVSLQEYMAFM 1563
N DG +S +E++
Sbjct: 61 NSDGKISKEEFLNAN 75
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand
calcium-binding protein; 1.75A {Gallus gallus} SCOP:
a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A
1npq_A 1trf_A
Length = 90
Score = 54.2 bits (131), Expect = 4e-09
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 1478 QQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDP 1537
QA ++ +SE+ + EF F FD D G ++ E + +R LG +
Sbjct: 4 TDQQAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP-------TKE 56
Query: 1538 EFEAILDLVDPNRDGHVSLQEYMAFMISK 1566
E +AI++ VD + G + +E++ M+ +
Sbjct: 57 ELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2
domain, SRC homology 3, RAS signaling pathway, proto-
oncogene, phosphorylation; 1.5A {Homo sapiens} PDB:
2j06_A
Length = 65
Score = 53.2 bits (128), Expect = 4e-09
Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 147 KECVIALYDYT-EKSPREVSMKKSDVLTLLNSNNKDWWKVEV--NDRQGFVPAAYVKKM 202
+ V A+ YT E+S K D+ + N W V D QG + V+++
Sbjct: 5 RRRVRAILPYTKVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEV 63
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria,
structural genomics consortium, SGC, transfe; 2.10A
{Plasmodium falciparum}
Length = 180
Score = 56.5 bits (137), Expect = 4e-09
Identities = 17/84 (20%), Positives = 36/84 (42%), Gaps = 9/84 (10%)
Query: 1484 NQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAIL 1543
++ V + +K + +F D + +G L+ E + L ++ G + IL
Sbjct: 29 HELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLASV---------GIKKWDINRIL 79
Query: 1544 DLVDPNRDGHVSLQEYMAFMISKE 1567
+D N G+++ E+MA +
Sbjct: 80 QALDINDRGNITYTEFMAGCYRWK 103
Score = 44.2 bits (105), Expect = 8e-05
Identities = 15/87 (17%), Positives = 33/87 (37%), Gaps = 20/87 (22%)
Query: 1488 VSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVD 1547
+ LK F DKD+ G +++++ S + ++ + + + V
Sbjct: 105 IESTFLKA---AFNKIDKDEDGYISKSDIVSL---------VHDKVLDNNDIDNFFLSVH 152
Query: 1548 PNRDGH--------VSLQEYMAFMISK 1566
+ G +S QE+ +M+S
Sbjct: 153 SIKKGIPREHIINKISFQEFKDYMLST 179
>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction
adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1
d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A
Length = 217
Score = 57.4 bits (138), Expect = 5e-09
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 150 VIALYDYTEKSPREVSMKKSDVLTLLN-SNNKDWWKVEVNDRQGFVPAAYVKKME 203
IA YD+ + E+S K+ D+L +LN +++W+K E+N + GF+P Y++
Sbjct: 3 AIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKP 57
Score = 57.0 bits (137), Expect = 6e-09
Identities = 13/65 (20%), Positives = 30/65 (46%)
Query: 139 TPVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAY 198
V AL+D+ + E+ ++ D + ++++++ +WWK + + G P Y
Sbjct: 150 DIEQVPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNY 209
Query: 199 VKKME 203
V +
Sbjct: 210 VTPVN 214
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural
genomics/proteomics initiative, RSGI, structural
genomics, endocytosis/exocytosis complex; NMR {Homo
sapiens} SCOP: b.34.2.1
Length = 80
Score = 53.6 bits (129), Expect = 5e-09
Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Query: 146 GKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDR-----QGFVPAAYVK 200
E Y ++S+ ++ +L N WW+ E+ R +G+ PA++VK
Sbjct: 6 SGEIAQVTSAYVASGSEQLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVK 65
Query: 201 KMEA 204
+
Sbjct: 66 LLGP 69
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 59.7 bits (145), Expect = 5e-09
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 150 VIALYDYTEKSPREVSMKKSDVLTLLN-SNNKDWWKVE-VNDRQGFVPAAYVKKME 203
IA Y++ + +++ K DVLT++ + + +W+K + R+G +PA YV+K E
Sbjct: 14 CIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKRE 69
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A
{Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A
1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D*
2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A
1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Length = 148
Score = 55.6 bits (135), Expect = 5e-09
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN 1549
+D+ +E FK FD+D +G ++ E + + LG L D E + ++ D +
Sbjct: 79 QDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKL-------TDDEVDEMIREADID 131
Query: 1550 RDGHVSLQEYMAFMISK 1566
DGH++ +E++ M+SK
Sbjct: 132 GDGHINYEEFVRMMVSK 148
Score = 54.4 bits (132), Expect = 1e-08
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
+E+ + EF F FDKD G + E + +R+LG + + E + +++ VD
Sbjct: 5 TEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNP-------TEAELQDMINEVDA 57
Query: 1549 NRDGHVSLQEYMAFMISK 1566
+ +G + E+++ M K
Sbjct: 58 DGNGTIDFPEFLSLMARK 75
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding,
EF-hand superfamily, S genomics, protein structure
initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Length = 272
Score = 58.2 bits (140), Expect = 6e-09
Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 1484 NQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDP---EFE 1540
+ S + F +++HFD D +G + E R + L ++ + +
Sbjct: 1 SDSAFANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKK 60
Query: 1541 AILDLVDPNRDGHVSLQEYMAFMISKE 1567
+ + D DG + ++E ++ +E
Sbjct: 61 SFMSAYDATFDGRLQIEELANMILPQE 87
Score = 53.9 bits (129), Expect = 1e-07
Identities = 19/97 (19%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
Query: 1472 MQHNLEQQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDL-PMV 1530
+ +Q + + + ++F +F H+D ++G L E ++ + + P +
Sbjct: 174 LALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSI 233
Query: 1531 EEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISKE 1567
G D E +L D N+DG + E + K
Sbjct: 234 SGGDLDKFRECLLTHCDMNKDGKIQKSELALCLGLKH 270
Score = 52.4 bits (125), Expect = 4e-07
Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDL-PMVEEGQPDPEFEAILDLVDP 1548
D EF +++ +D D SG ++ E K+ L+ L + + D +A++ + D
Sbjct: 100 LDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDK 159
Query: 1549 NRDGHVSLQEYMAFMISKE 1567
N+DG + L + + +E
Sbjct: 160 NKDGRLDLNDLARILALQE 178
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin;
EF-hands, calcium, metal binding protein; 2.17A {Bos
taurus} PDB: 2f2p_A
Length = 179
Score = 56.4 bits (137), Expect = 6e-09
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
+E+ + EF F FDKD G + E + +R+LG + + E + +++ VD
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-------TEAELQDMINEVDA 58
Query: 1549 NRDGHVSLQEYMAFMISK 1566
+ +G + E++ M K
Sbjct: 59 DGNGTIDFPEFLTMMARK 76
Score = 54.5 bits (132), Expect = 2e-08
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN 1549
D+ +E F+ FDKD +G ++ E + + LG E D E + ++ D +
Sbjct: 80 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-------EKLTDEEVDEMIREADID 132
Query: 1550 RDGHVSLQEYMAFMISK 1566
DG V+ +E++ M +K
Sbjct: 133 GDGQVNYEEFVQMMTAK 149
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin
chimera; calcium sensor, fluorescent protein; HET: CRO;
1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A*
3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A*
3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Length = 450
Score = 59.1 bits (143), Expect = 6e-09
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 1478 QQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDP 1537
+++ + ++E+ + EF F FDKD G + E + +R+LG + +
Sbjct: 296 HKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-------TEA 348
Query: 1538 EFEAILDLVDPNRDGHVSLQEYMAFMISK 1566
E + +++ VD + +G + E++ M K
Sbjct: 349 ELQDMINEVDADGNGTIDFPEFLTMMARK 377
Score = 56.4 bits (136), Expect = 4e-08
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN 1549
D+ +E F+ FDKD +G ++ E + + LG L D E + ++ D +
Sbjct: 381 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-------TDEEVDEMIREADID 433
Query: 1550 RDGHVSLQEYMAFMISK 1566
DG V+ +E++ M +K
Sbjct: 434 GDGQVNYEEFVQMMTAK 450
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure
initiative, southeast collaboratory for structural
genomics, secsg; 2.00A {Beroe abyssicola}
Length = 208
Score = 56.8 bits (137), Expect = 7e-09
Identities = 10/83 (12%), Positives = 20/83 (24%), Gaps = 2/83 (2%)
Query: 1483 RNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPD--PEFE 1540
N + L F FD D GK+ E + + +E
Sbjct: 25 FNVEDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVR 84
Query: 1541 AILDLVDPNRDGHVSLQEYMAFM 1563
+ ++++
Sbjct: 85 VFFLHKGVEPVNGLLREDWVEAN 107
Score = 52.9 bits (127), Expect = 1e-07
Identities = 13/95 (13%), Positives = 31/95 (32%), Gaps = 12/95 (12%)
Query: 1469 GMRMQHNLEQQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLP 1528
R+ E++ + R + + + + D D G ++ E K+ ++A
Sbjct: 106 ANRVFAEAERERERRGEPSLIALLSNSY---YDVLDDDGDGTVDVDELKTMMKAF----- 157
Query: 1529 MVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFM 1563
P + D ++ G + E +
Sbjct: 158 ----DVPQEAAYTFFEKADTDKSGKLERTELVHLF 188
Score = 39.4 bits (92), Expect = 0.004
Identities = 13/78 (16%), Positives = 23/78 (29%), Gaps = 4/78 (5%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPD----PEFEAILDL 1545
E + F H + L + ++ R E + D+
Sbjct: 77 EKMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDV 136
Query: 1546 VDPNRDGHVSLQEYMAFM 1563
+D + DG V + E M
Sbjct: 137 LDDDGDGTVDVDELKTMM 154
Score = 32.1 bits (73), Expect = 1.1
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Query: 1487 GVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYD 1526
V ++A F+ D DKSGKL +TE R +
Sbjct: 158 DVPQEAAYT---FFEKADTDKSGKLERTELVHLFRKFWME 194
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural
genomics, structural genomics CONS SGC; 2.00A {Plasmodium
falciparum K1}
Length = 197
Score = 56.1 bits (136), Expect = 8e-09
Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 7/79 (8%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
+ + +F D D SG L+ E L+ +GY P+ +L +D
Sbjct: 52 CDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQK-------IPPDIHQVLRDIDS 104
Query: 1549 NRDGHVSLQEYMAFMISKE 1567
N G + +++A I K+
Sbjct: 105 NASGQIHYTDFLAATIDKQ 123
Score = 50.7 bits (122), Expect = 7e-07
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 1500 FKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEY 1559
FK FD D +GK++ E K + P++++ +++L VD N DG + E+
Sbjct: 135 FKFFDIDGNGKISVEELKRIFGRDDIENPLIDK-----AIDSLLQEVDLNGDGEIDFHEF 189
Query: 1560 MAFMISKE 1567
M M K+
Sbjct: 190 MLMMSKKK 197
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase
structural genomics malaria, structural genom consortium,
SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB:
3o4y_A
Length = 191
Score = 56.1 bits (136), Expect = 9e-09
Identities = 14/80 (17%), Positives = 34/80 (42%), Gaps = 8/80 (10%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
++ +++ F D+D G + + + K L G + F+ +LD +D
Sbjct: 47 NDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGL--------KLPYNFDLLLDQIDS 98
Query: 1549 NRDGHVSLQEYMAFMISKET 1568
+ G + E++A + ++
Sbjct: 99 DGSGKIDYTEFIAAALDRKQ 118
Score = 51.9 bits (125), Expect = 2e-07
Identities = 15/80 (18%), Positives = 30/80 (37%), Gaps = 5/80 (6%)
Query: 1484 NQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAIL 1543
++ +S+ + F+ FD D G++ E L + + + ++
Sbjct: 115 DRKQLSKKLIYC---AFRVFDVDNDGEITTAELAHILYNGNKKGNITQR--DVNRVKRMI 169
Query: 1544 DLVDPNRDGHVSLQEYMAFM 1563
VD N DG + E+ M
Sbjct: 170 RDVDKNNDGKIDFHEFSEMM 189
>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2,
signal transduction, adapter molecule, signaling
protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A
2eyw_A
Length = 230
Score = 56.8 bits (136), Expect = 9e-09
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 127 LREQAQSCRQQETPVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVE 186
L E RQ ++ E V AL+D+ ++ KK D+L + + + WW E
Sbjct: 116 LIEPVSRSRQGSGVILRQEEAEYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAE 175
Query: 187 -VNDRQGFVPAAYVKKME 203
++G +P YV+K
Sbjct: 176 DSEGKRGMIPVPYVEKYR 193
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein;
1.90A {Homo sapiens}
Length = 107
Score = 53.5 bits (129), Expect = 1e-08
Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 7/78 (8%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
L+ F + FD + +G ++ K L LG + E + ++ V
Sbjct: 27 LPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLG-------VPKTHLELKKLIGEVSS 79
Query: 1549 NRDGHVSLQEYMAFMISK 1566
S +++ M+ K
Sbjct: 80 GSGETFSYPDFLRMMLGK 97
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding
protein, CBP40, metal binding protein; 3.00A {Physarum
polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Length = 323
Score = 57.5 bits (139), Expect = 1e-08
Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 7/79 (8%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
SE+ +F SGK + + K L + P+ + + +V+
Sbjct: 117 SEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTI-------PEGPLKKLFVMVEN 169
Query: 1549 NRDGHVSLQEYMAFMISKE 1567
+ G +S +A
Sbjct: 170 DTKGRMSYITLVAVANDLA 188
Score = 56.4 bits (136), Expect = 3e-08
Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 8/75 (10%)
Query: 1493 LKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDG 1552
L F+ D + +G L++ EF+ LG+D +A+ D +
Sbjct: 187 LAALVADFRKIDTNSNGTLSRKEFREHFVRLGFDK--------KSVQDALFRYADEDESD 238
Query: 1553 HVSLQEYMAFMISKE 1567
V EY+ +
Sbjct: 239 DVGFSEYVHLGLCLL 253
Score = 51.3 bits (123), Expect = 1e-06
Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 6/75 (8%)
Query: 1492 ALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRD 1551
L +++ D DKSG+L++ E + L +FE +VD +
Sbjct: 251 CLLVLRILYAFADFDKSGQLSKEEVQKVLEDAHIPE------SARKKFEHQFSVVDVDDS 304
Query: 1552 GHVSLQEYMAFMISK 1566
+S QE++ ++
Sbjct: 305 KSLSYQEFVMLVLLM 319
Score = 32.5 bits (74), Expect = 1.0
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 1481 QARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYD 1526
+ + + E A K+F F D D S L+ EF + + +D
Sbjct: 277 KVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVLLMFHD 322
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP:
a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Length = 108
Score = 53.1 bits (128), Expect = 1e-08
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
Query: 1480 IQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEF 1539
Q S +S +K+ +F+ D D+SG L+ E K L+ D + E
Sbjct: 30 FQTSGLSKMSASQVKD---IFRFIDNDQSGYLDGDELKYFLQKFQSDA----RELTESET 82
Query: 1540 EAILDLVDPNRDGHVSLQEYMAFMIS 1565
++++D D + DG + E+ + S
Sbjct: 83 KSLMDAADNDGDGKIGADEFQEMVHS 108
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand;
1.75A {Physarum polycephalum}
Length = 142
Score = 54.0 bits (131), Expect = 1e-08
Identities = 14/77 (18%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN 1549
+D + EF F+ FD +++G + + ++ L+ G + F + + D
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRV-------EPAAFNEMFNEADAT 54
Query: 1550 RDGHVSLQEYMAFMISK 1566
+G + E+++ M +
Sbjct: 55 GNGKIQFPEFLSMMGRR 71
Score = 49.8 bits (120), Expect = 5e-07
Identities = 13/76 (17%), Positives = 26/76 (34%), Gaps = 8/76 (10%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN 1549
+ F+ FD + +G + + + L LG L EF L + +
Sbjct: 75 TTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRL-------KPHEFAEFLGITETE 127
Query: 1550 RDGHVSLQEYMAFMIS 1565
G + ++ M +
Sbjct: 128 -KGQIRYDNFINTMFT 142
>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A
{Saccharomyces cerevisiae}
Length = 70
Score = 52.0 bits (125), Expect = 1e-08
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 150 VIALYDYT--EKSPREVSMKKSDVLTLLNSNNKDWWKVE-VNDRQGFVPAAYVKKMEA 204
ALY Y + E+S +++++L + + WWK N G +P+ YV+ ++
Sbjct: 8 AKALYPYDADDDDAYEISFEQNEILQVSD-IEGRWWKARRANGETGIIPSNYVQLIDG 64
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand,
cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Length = 78
Score = 52.2 bits (126), Expect = 2e-08
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 11/78 (14%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN 1549
D ++ +FK FD + GK++ +E LR LG E + ++ +D +
Sbjct: 2 ADDMER---IFKRFDTNGDGKISLSELTDALRTLG--------STSADEVQRMMAEIDTD 50
Query: 1550 RDGHVSLQEYMAFMISKE 1567
DG + E+++F +
Sbjct: 51 GDGFIDFNEFISFCNANP 68
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 58.0 bits (140), Expect = 2e-08
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVE--VNDRQGFVPAAYVKKM 202
G +ALYDY ++ ++S KK + L ++N+ DWW + G++P+ YV
Sbjct: 83 GGVTTFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPS 142
Query: 203 E 203
+
Sbjct: 143 D 143
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Length = 94
Score = 52.7 bits (127), Expect = 2e-08
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN 1549
D+ +E F+ DKD +G ++ E + + LG E D E + ++ D +
Sbjct: 25 TDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLG-------EKLTDEEVDEMIREADID 77
Query: 1550 RDGHVSLQEYMAFMISK 1566
DG V+ +E++ M +K
Sbjct: 78 GDGQVNYEEFVQMMTAK 94
>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2,
SH3 domain, TKL kinase, MKN28, structural GEN structural
genomics consortium, SGC; 2.00A {Homo sapiens}
Length = 89
Score = 52.1 bits (125), Expect = 2e-08
Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 146 GKECVIALYDYTEKSPREVSMKKSDVLTLLN-----SNNKDWWKVEV-NDRQGFVPAAYV 199
A++DY E+++++ D + +L+ S ++ WW ++ + R G P+ YV
Sbjct: 28 AGPVWTAVFDYEAAGDEELTLRRGDRVQVLSQDCAVSGDEGWWTGQLPSGRVGVFPSNYV 87
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 57.4 bits (139), Expect = 2e-08
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 150 VIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVE--VNDRQGFVPAAYVKKME 203
V+ALYDY ++S +K D + +L + +WWK ++G++P+ YV +++
Sbjct: 11 VVALYDYEAIHHEDLSFQKGDQMVVLE-ESGEWWKARSLATRKEGYIPSNYVARVD 65
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding
Pro; NMR {Glycine max}
Length = 92
Score = 52.2 bits (126), Expect = 2e-08
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 1488 VSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVD 1547
+ DA +E FK FDKD++G ++ +E + + LG E D E E ++ D
Sbjct: 3 MDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLG-------EKLTDEEVEQMIKEAD 55
Query: 1548 PNRDGHVSLQEYMAFMISK 1566
+ DG V+ +E++ M++
Sbjct: 56 LDGDGQVNYEEFVKMMMTV 74
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light
chain, cell cycle protein; 1.65A {Saccharomyces
cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A
2fce_A
Length = 148
Score = 53.8 bits (130), Expect = 2e-08
Identities = 16/88 (18%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 1479 QIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPE 1538
++ + ++ ++F F+ FDK+ +GK++ + + L LG E D E
Sbjct: 68 EVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLG-------EKLTDAE 120
Query: 1539 FEAILDLVDPNRDGHVSLQEYMAFMISK 1566
+ +L V+ + +G + ++++ ++ +
Sbjct: 121 VDELLKGVEVDSNGEIDYKKFIEDVLRQ 148
Score = 45.7 bits (109), Expect = 1e-05
Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 8/75 (10%)
Query: 1493 LKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDL-VDPNRD 1551
+ +F FDK G + + LRA+GY+ + + I++
Sbjct: 3 TRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNP-------TNQLVQDIINADSSLRDA 55
Query: 1552 GHVSLQEYMAFMISK 1566
++L + +
Sbjct: 56 SSLTLDQITGLIEVN 70
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora
erythraea} SCOP: a.39.1.5
Length = 176
Score = 54.4 bits (131), Expect = 2e-08
Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 9/87 (10%)
Query: 1477 EQQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPD 1536
E I + ++ + + DK+ G++N EF + L ALG
Sbjct: 85 ENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGMS---------K 135
Query: 1537 PEFEAILDLVDPNRDGHVSLQEYMAFM 1563
E + VD N +G +SL E + +
Sbjct: 136 AEAAEAFNQVDTNGNGELSLDELLTAV 162
Score = 54.4 bits (131), Expect = 3e-08
Identities = 13/93 (13%), Positives = 31/93 (33%), Gaps = 8/93 (8%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDL---PMVEEGQ-----PDPEFE 1540
+ A F +D D +G L + +F+ + + E Q F+
Sbjct: 2 TAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFD 61
Query: 1541 AILDLVDPNRDGHVSLQEYMAFMISKETRQNSS 1573
+ DG ++ ++++ + Q +
Sbjct: 62 YLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEA 94
Score = 43.2 bits (102), Expect = 2e-04
Identities = 15/103 (14%), Positives = 33/103 (32%), Gaps = 1/103 (0%)
Query: 1462 WDQLDQLGMRMQHNLEQQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLR 1521
++ + + A + F + K G L + +F
Sbjct: 26 RADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTE 85
Query: 1522 ALGYDL-PMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFM 1563
L ++ P + I+ + D N DG ++ E+ A++
Sbjct: 86 NLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWL 128
Score = 31.6 bits (72), Expect = 1.3
Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 10/52 (19%)
Query: 1487 GVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPE 1538
G+S+ E F D + +G+L+ E + +R + G+ D E
Sbjct: 132 GMSKAEAAE---AFNQVDTNGNGELSLDELLTAVRDFHF-------GRLDVE 173
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein;
1.50A {Streptomyces coelicolor} PDB: 3aka_A
Length = 166
Score = 54.0 bits (130), Expect = 3e-08
Identities = 10/84 (11%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 1491 DALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEG--------QPDPEFEAI 1542
+ + + F FD+D +G +++++F +A+ + + + ++ +
Sbjct: 1 EYERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGL 60
Query: 1543 LDLVDPNRDGHVSLQEYMAFMISK 1566
+ D + D ++ +E++ + +
Sbjct: 61 AGIADRDGDQRITREEFVTGAVKR 84
Score = 50.5 bits (121), Expect = 4e-07
Identities = 13/86 (15%), Positives = 21/86 (24%), Gaps = 9/86 (10%)
Query: 1478 QQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDP 1537
+ +E A D D G + + L A G +
Sbjct: 82 VKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFGVP---------ED 132
Query: 1538 EFEAILDLVDPNRDGHVSLQEYMAFM 1563
+D + DG V E +
Sbjct: 133 LARQAAAALDTDGDGKVGETEIVPAF 158
Score = 47.0 bits (112), Expect = 7e-06
Identities = 15/104 (14%), Positives = 32/104 (30%)
Query: 1462 WDQLDQLGMRMQHNLEQQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLR 1521
M ++ + A + + D+D ++ + EF +
Sbjct: 23 RSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGAV 82
Query: 1522 ALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMIS 1565
D P P A L + D + DG V++ + + +
Sbjct: 83 KRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTA 126
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A
{Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A
Length = 147
Score = 53.2 bits (129), Expect = 3e-08
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
+E+ + EF F FDKD SG ++ +E + +R+LG + E +++ +D
Sbjct: 6 TEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSP-------SEAEVADLMNEIDV 58
Query: 1549 NRDGHVSLQEYMAFMISK 1566
+ + + E++A M +
Sbjct: 59 DGNHAIEFSEFLALMSRQ 76
Score = 49.4 bits (119), Expect = 8e-07
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN 1549
D+ +E FK FDK+ G ++ E K L ++G E D E + +L V +
Sbjct: 80 NDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG-------EKLTDAEVDEMLREVS-D 131
Query: 1550 RDGHVSLQEYMAFM 1563
G ++++++ A +
Sbjct: 132 GSGEINIKQFAALL 145
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding
protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB:
2scp_A
Length = 174
Score = 54.0 bits (130), Expect = 3e-08
Identities = 15/84 (17%), Positives = 34/84 (40%), Gaps = 10/84 (11%)
Query: 1481 QARNQSGVSEDALKEFSM-MFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEF 1539
+ ++ ++ ++ F+ D ++ +++ E+ LG D
Sbjct: 80 KEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLD---------KTMA 130
Query: 1540 EAILDLVDPNRDGHVSLQEYMAFM 1563
A D +D N DG +SL+E++
Sbjct: 131 PASFDAIDTNNDGLLSLEEFVIAG 154
Score = 48.2 bits (115), Expect = 3e-06
Identities = 11/83 (13%), Positives = 27/83 (32%), Gaps = 6/83 (7%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDL--- 1545
S+ +++ F D DK G + + +F+S + M E +++ +
Sbjct: 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAE-HAKVLMDSLTGVWDN 59
Query: 1546 --VDPNRDGHVSLQEYMAFMISK 1566
+ ++ M
Sbjct: 60 FLTAVAGGKGIDETTFINSMKEM 82
>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural
genomics, riken structural genomics/proteomics
initiative, RSGI, protein binding; NMR {Homo sapiens}
SCOP: b.34.2.1
Length = 96
Score = 51.8 bits (124), Expect = 4e-08
Identities = 13/72 (18%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
Query: 149 CVIALYDY------TEKSPREVSMKKSDVLTLLNSNNKD-WWKVEVND-RQGFVPAAYVK 200
+A Y Y E E+ + L + ++D +++ E+ D ++G VP+ +V
Sbjct: 19 LCVARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVD 78
Query: 201 KMEAGLTASQQN 212
++ +
Sbjct: 79 FVQDNESRLAST 90
>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3,
signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A
2l3q_A 2ggr_A
Length = 304
Score = 55.7 bits (133), Expect = 4e-08
Identities = 15/113 (13%), Positives = 40/113 (35%), Gaps = 2/113 (1%)
Query: 91 QFLEHYGKDEDSSEALLKKHEALVSDLEAFGNTILGLREQAQSCRQQETPVIDVTGKECV 150
++E Y S AL+ ++ G + + + + + V
Sbjct: 185 PYVEKYRPASASVSALIGGNQEGSHPQPLGGPEPGPYAQPSVNTPLPNLQNGPIYAR--V 242
Query: 151 IALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKME 203
I ++++ +++ + N W+ E N ++G P +V+ ++
Sbjct: 243 IQKRVPNAYDKTALALEVGELVKVTKINVSGQWEGECNGKRGHFPFTHVRLLD 295
Score = 53.4 bits (127), Expect = 2e-07
Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Query: 110 HEALVSDLEAFGNTILGLREQAQSCRQQETPVIDVTGKECVIALYDYTEKSPREVSMKKS 169
AL+ + L E RQ ++ E V AL+D+ ++ KK
Sbjct: 97 LPALLEFYKIHYLDTTTLIEPVSRSRQGSGVILRQEEAEYVRALFDFNGNDEEDLPFKKG 156
Query: 170 DVLTLLNSNNKDWWKVE-VNDRQGFVPAAYVKKME 203
D+L + + + WW E ++G +P YV+K
Sbjct: 157 DILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYR 191
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like
domain, EF calcium binding protein, transferase; 2.00A
{Arabidopsis thaliana}
Length = 166
Score = 53.3 bits (129), Expect = 5e-08
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
SE+ + MF D DKSG++ E K+ L+ +G +L + E ++ D
Sbjct: 22 SEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANL-------KESEILDLMQAADV 74
Query: 1549 NRDGHVSLQEYMAFMISKETRQN 1571
+ G + +E++A + +
Sbjct: 75 DNSGTIDYKEFIAATLHLNKIER 97
Score = 49.8 bits (120), Expect = 7e-07
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 12/75 (16%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
ED L F +FDKD SG + E + G + D E ++ VD
Sbjct: 97 REDHLFA---AFTYFDKDGSGYITPDELQQACEEFGVE---------DVRIEELMRDVDQ 144
Query: 1549 NRDGHVSLQEYMAFM 1563
+ DG + E++A M
Sbjct: 145 DNDGRIDYNEFVAMM 159
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata}
SCOP: a.39.1.4
Length = 109
Score = 51.8 bits (125), Expect = 5e-08
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
++ +KE F+ DKD+SG + + E K L+ D E +A+L D
Sbjct: 39 TDAQVKEV---FEILDKDQSGFIEEEELKGVLKGFS----AHGRDLNDTETKALLAAGDS 91
Query: 1549 NRDGHVSLQEYMAFM 1563
+ DG + E+ +
Sbjct: 92 DHDGKIGADEFAKMV 106
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB:
2pas_A 3pat_A
Length = 110
Score = 51.4 bits (124), Expect = 5e-08
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
Query: 1486 SGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDL 1545
+S + +K+ +FK D D SG + + E K L++ D E +A L
Sbjct: 37 KAMSANDVKK---VFKAIDADASGFIEEEELKFVLKSFA----ADGRDLTDAETKAFLKA 89
Query: 1546 VDPNRDGHVSLQEYMAFM 1563
D + DG + + E+ +
Sbjct: 90 ADKDGDGKIGIDEFETLV 107
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal
binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Length = 158
Score = 52.6 bits (127), Expect = 7e-08
Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN 1549
E +E F+ +DK+ +G ++ + L L E + +A++D +D +
Sbjct: 87 EQMQQELREAFRLYDKEGNGYISTDVMREILAELD-------ETLSSEDLDAMIDEIDAD 139
Query: 1550 RDGHVSLQEYMAFM 1563
G V +E+M M
Sbjct: 140 GSGTVDFEEFMGVM 153
Score = 51.8 bits (125), Expect = 1e-07
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 8/79 (10%)
Query: 1489 SEDALKEFSMMFKHFDK-DKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVD 1547
S + +K F+ F+ + SG+++ + L LG ++D D
Sbjct: 8 SSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQ-------TKSTIRQLIDEFD 60
Query: 1548 PNRDGHVSLQEYMAFMISK 1566
P +G + +
Sbjct: 61 PFGNGDIDFDSFKIIGARF 79
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural
genomics, seattle S genomics center for infectious
disease, ssgcid; 1.90A {Entamoeba histolytica} PDB:
3sia_A 3sib_A
Length = 220
Score = 54.0 bits (130), Expect = 7e-08
Identities = 11/65 (16%), Positives = 21/65 (32%), Gaps = 8/65 (12%)
Query: 1500 FKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEY 1559
F + +SG L E L+ LG+ + + +L + L +
Sbjct: 123 FVMNARARSGTLEPHEILPALQQLGFYI--------NQRTSLLLHRLFARGMAFCDLNCW 174
Query: 1560 MAFMI 1564
+A
Sbjct: 175 IAICA 179
Score = 52.5 bits (126), Expect = 2e-07
Identities = 19/99 (19%), Positives = 33/99 (33%), Gaps = 7/99 (7%)
Query: 1469 GMRMQHNLEQQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLP 1528
+M ++ + + D F D+D+SG L E G L
Sbjct: 26 IYQMPPSVRNTWWFPLLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRL- 84
Query: 1529 MVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISKE 1567
++ + D + +GH+S E+MA E
Sbjct: 85 ------SPQTALRMMRIFDTDFNGHISFYEFMAMYKFME 117
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand,
helix-loop-helix, calcium-binding, calmodulin
superfamily, transferase, plant protein; NMR {Glycine
max} SCOP: a.39.1.5
Length = 188
Score = 53.4 bits (129), Expect = 7e-08
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
SE+ + +FK D D SG + E K L+ +G +L + E + ++D D
Sbjct: 5 SEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSEL-------MESEIKDLMDAADI 57
Query: 1549 NRDGHVSLQEYMAFMISKETRQN 1571
++ G + E++A + +
Sbjct: 58 DKSGTIDYGEFIAATVHLNKLER 80
Score = 50.7 bits (122), Expect = 5e-07
Identities = 19/85 (22%), Positives = 33/85 (38%), Gaps = 12/85 (14%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
E+ L F +FDKD SG + E + + G D D + ++ +D
Sbjct: 80 REENLVS---AFSYFDKDGSGYITLDEIQQACKDFGLD---------DIHIDDMIKEIDQ 127
Query: 1549 NRDGHVSLQEYMAFMISKETRQNSS 1573
+ DG + E+ A M ++
Sbjct: 128 DNDGQIDYGEFAAMMRKRKGNGGIG 152
>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein
1, islet-brain-1, IB-1, mitogen-activated P kinase
8-interacting protein 1; 3.00A {Rattus norvegicus}
Length = 71
Score = 50.0 bits (120), Expect = 8e-08
Identities = 9/58 (15%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 147 KECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWK--VEVNDRQGFVPAAYVKKM 202
++ A++ + + E+ ++ D L + W++ +G PA Y ++
Sbjct: 6 EQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAIEV 63
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin
crosslinking, ionized calciu binding adapter molecule 2,
metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B
2vtg_A
Length = 150
Score = 52.2 bits (125), Expect = 8e-08
Identities = 13/78 (16%), Positives = 30/78 (38%), Gaps = 7/78 (8%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
+ L F + FD + G+++ K + LG + E + ++ V
Sbjct: 45 LPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVP-------KTHLEMKKMISEVTG 97
Query: 1549 NRDGHVSLQEYMAFMISK 1566
+S ++++ M+ K
Sbjct: 98 GVSDTISYRDFVNMMLGK 115
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal
binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Length = 147
Score = 52.2 bits (125), Expect = 9e-08
Identities = 14/80 (17%), Positives = 31/80 (38%), Gaps = 7/80 (8%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
L+ F + + FD + +G ++ K L LG + E + ++ V
Sbjct: 43 LPSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLG-------VPKTHLELKRLIREVSS 95
Query: 1549 NRDGHVSLQEYMAFMISKET 1568
+ S +++ M+ K +
Sbjct: 96 GSEETFSYSDFLRMMLGKRS 115
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta
barrel, beta sandwich, signaling protei; 2.25A {Homo
sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Length = 466
Score = 55.7 bits (134), Expect = 9e-08
Identities = 19/92 (20%), Positives = 42/92 (45%)
Query: 149 CVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEAGLTA 208
C AL+D+ +E+ K DV+ ++++ N++WW V D +G+ PA++V+
Sbjct: 32 CAEALWDHVTMDDQELGFKAGDVIEVMDATNREWWWGRVADGEGWFPASFVRLRVNQDEP 91
Query: 209 SQQNLADVKEVKILETANDIQERREQVLNRYA 240
+ + + + Q ++Q+
Sbjct: 92 ADDDAPLAGNSGAEDGGAEAQSSKDQMRTNVI 123
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein;
HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB:
1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Length = 109
Score = 50.8 bits (122), Expect = 9e-08
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 1487 GVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLV 1546
G+ + + + +F DKDKSG + + E S L+ E + ++
Sbjct: 34 GLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFS----SDARDLSAKETKTLMAAG 89
Query: 1547 DPNRDGHVSLQEYMAFM 1563
D + DG + ++E+ +
Sbjct: 90 DKDGDGKIGVEEFSTLV 106
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and
4 calmodulin...; transferase, calcium dependent protein
kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB:
3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 55.5 bits (134), Expect = 9e-08
Identities = 20/85 (23%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 1488 VSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYD-LPMVEEGQPDPEFEAILDLV 1546
S++ KE + +F+H DK+ G+L++ E L + + + + Q + E +AIL
Sbjct: 340 TSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAA 399
Query: 1547 DPNRDGHVSLQEYMAFMISKETRQN 1571
D +R+G++ E++ + +++ +
Sbjct: 400 DFDRNGYIDYSEFVTVAMDRKSLLS 424
Score = 49.3 bits (118), Expect = 8e-06
Identities = 14/66 (21%), Positives = 28/66 (42%), Gaps = 9/66 (13%)
Query: 1498 MMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQ 1557
F+ FD+D +GK++ E S + ++ ++ +D N DG V +
Sbjct: 430 SAFQKFDQDGNGKISVDELASVFG---------LDHLESKTWKEMISGIDSNNDGDVDFE 480
Query: 1558 EYMAFM 1563
E+ +
Sbjct: 481 EFCKMI 486
Score = 30.1 bits (68), Expect = 7.8
Identities = 21/133 (15%), Positives = 40/133 (30%), Gaps = 22/133 (16%)
Query: 1405 GTGSLEQQLEAIKRKAAEVRSRRSDLKKIEDLGAILEEHLILDNR---YTE--------- 1452
G ++ ++ + + E + + ++ AIL N Y+E
Sbjct: 361 GQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRK 420
Query: 1453 --HSTVGLAQQWDQLDQLGMR--MQHNLEQQIQARNQSGVSEDALKEFSMMFKHFDKDKS 1508
S L + + DQ G L + KE M D +
Sbjct: 421 SLLSKDKLESAFQKFDQDGNGKISVDELASVF---GLDHLESKTWKE---MISGIDSNND 474
Query: 1509 GKLNQTEFKSCLR 1521
G ++ EF ++
Sbjct: 475 GDVDFEEFCKMIQ 487
>1u3o_A Huntingtin-associated protein-interacting protein; SH3,
CIS-proline,, signaling protein; NMR {Rattus norvegicus}
Length = 82
Score = 50.0 bits (119), Expect = 1e-07
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 146 GKECVIALYDYTEKSPREVSMKKSDVLTLLN--SNNKDWWKVEVNDR----QGFVPAAYV 199
G E + L D++ E+S++ + LL S W V +R +G VP++ +
Sbjct: 16 GCELTVVLQDFSAAHSSELSIQVGQTVELLERPSERPGWCLVRTTERSPPQEGLVPSSTL 75
Query: 200 K 200
Sbjct: 76 C 76
>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical
protein BAA76854.1, riken structural genomics/proteomics
initiative RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Length = 92
Score = 50.0 bits (119), Expect = 1e-07
Identities = 11/73 (15%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 133 SCRQQETPVIDVTGKECV-IALYDYTEKSPREVSMKKSDVLTLLNSN----NKDWWKVEV 187
S ++ E + A ++ +VS+ + D++ ++ +++ W ++
Sbjct: 2 SSGSSGASLLARYPPEKLFQAERNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLIDN 61
Query: 188 NDRQGFVPAAYVK 200
+GFV ++++K
Sbjct: 62 GVTKGFVYSSFLK 74
>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene
homolog (avian)- signaling protein; NMR {Homo sapiens}
PDB: 2lqw_A*
Length = 303
Score = 54.2 bits (129), Expect = 1e-07
Identities = 12/78 (15%), Positives = 26/78 (33%)
Query: 126 GLREQAQSCRQQETPVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKV 185
+ + + I ++++ D++ + N W+
Sbjct: 218 AVSGSPGAAITPLPSTQNGPVFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEG 277
Query: 186 EVNDRQGFVPAAYVKKME 203
EVN R+G P +VK +
Sbjct: 278 EVNGRKGLFPFTHVKIFD 295
Score = 50.0 bits (118), Expect = 3e-06
Identities = 22/113 (19%), Positives = 40/113 (35%), Gaps = 1/113 (0%)
Query: 91 QFLEHYGKDEDSSEALLKKHEALVSDLEAFGNTILGLREQAQSCRQQETPVIDVTGKECV 150
+ + ++ D ALL+ ++ D E V
Sbjct: 69 RRFKIGDQEFDHLPALLEFYKIHYLDTTTLIEPAPRYPSPPMGSVSAPNLPTAEDNLEYV 128
Query: 151 IALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVND-RQGFVPAAYVKKM 202
LYD+ ++ KK ++L ++ + WW D R G +P YV+K+
Sbjct: 129 RTLYDFPGNDAEDLPFKKGEILVIIEKPEEQWWSARNKDGRVGMIPVPYVEKL 181
>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding
protein G; sortase, protein ligation, intein, inset,
solubility enhancement; NMR {Mus musculus}
Length = 142
Score = 51.2 bits (122), Expect = 1e-07
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLN-SNNKDWWKVEVNDRQGFVPAAYVKKM 202
A YD+ + E+S+K+ D++ +LN + WW+ E+ R G+ P+ YV++
Sbjct: 3 GTFGTAKARYDFCARDRSELSLKEGDIIKILNKKGQQGWWRGEIYGRIGWFPSNYVEED 61
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate
cyclase activating protein, GCAP1, GCAP-1, calcium,
lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Length = 198
Score = 52.5 bits (126), Expect = 1e-07
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 1487 GVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLV 1546
G + L+ FK +D D +G +++ E + ++A+ E + + D +
Sbjct: 84 GKVDQKLR---WYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKI 140
Query: 1547 DPNRDGHVSLQEYMAFM 1563
D N DG +SL+E+M +
Sbjct: 141 DINGDGELSLEEFMEGV 157
Score = 48.2 bits (115), Expect = 4e-06
Identities = 16/88 (18%), Positives = 32/88 (36%), Gaps = 8/88 (9%)
Query: 1479 QIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPE 1538
+ ++ +S ++ F + SG+L EFK +
Sbjct: 2 NMDSKAVEELSATECHQWYKKFM--TECPSGQLTLYEFKQFFGLKNLS------PSANKY 53
Query: 1539 FEAILDLVDPNRDGHVSLQEYMAFMISK 1566
E + + D N+DG++ EY+A +
Sbjct: 54 VEQMFETFDFNKDGYIDFMEYVAALSLV 81
>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain,
hormone/growth factor complex; 1.39A {Homo sapiens}
SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A
Length = 108
Score = 50.4 bits (120), Expect = 2e-07
Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 11/77 (14%)
Query: 150 VIALYDYTEKSPREVSMKKSD---VLTLLNSNNKDWWKVEVND--------RQGFVPAAY 198
+AL DY R +++ + V + L + +W V R G+ P++
Sbjct: 25 AVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSI 84
Query: 199 VKKMEAGLTASQQNLAD 215
V++ + D
Sbjct: 85 VREDQTLKPGKVDVKTD 101
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP;
2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A
2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A*
1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A*
3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Length = 161
Score = 51.8 bits (125), Expect = 2e-07
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 10/82 (12%)
Query: 1486 SGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDL 1545
G SE+ L + +F+ FDK+ G ++ E K L+A G E + + E ++
Sbjct: 90 KGKSEEELSD---LFRMFDKNADGYIDLEELKIMLQATG-------ETITEDDIEELMKD 139
Query: 1546 VDPNRDGHVSLQEYMAFMISKE 1567
D N DG + E++ FM E
Sbjct: 140 GDKNNDGRIDYDEFLEFMKGVE 161
Score = 51.0 bits (123), Expect = 3e-07
Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
Query: 1489 SEDALKEFSMMFKHFDKD-KSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVD 1547
+E+ EF F F + G ++ E +R LG + E + ++D VD
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNP-------TPEELQEMIDEVD 65
Query: 1548 PNRDGHVSLQEYMAFMISK 1566
+ G V E++ M+
Sbjct: 66 EDGSGTVDFDEFLVMMVRS 84
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein
protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A*
1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B
1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Length = 173
Score = 51.7 bits (124), Expect = 2e-07
Identities = 12/76 (15%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Query: 1493 LKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDG 1552
+K++ ++K FD D+SG + +E A G+ L + +++ + G
Sbjct: 76 IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHL--------NEHLYSMIIRRYSDEGG 127
Query: 1553 HVSLQEYMAFMISKET 1568
++ +++ ++ +
Sbjct: 128 NMDFDNFISCLVRLDA 143
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium
binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Length = 108
Score = 50.0 bits (120), Expect = 2e-07
Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 1486 SGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDL 1545
SG+S+ + + +F+ D D+SG + + E K L+ E + L
Sbjct: 33 SGMSKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFE----SGARVLTASETKTFLAA 88
Query: 1546 VDPNRDGHVSLQEYMAFMIS 1565
D + DG + +E+ + S
Sbjct: 89 ADHDGDGKIGAEEFQEMVQS 108
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3
(SH3) domain, all beta structure, signaling protein;
HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Length = 62
Score = 48.3 bits (116), Expect = 2e-07
Identities = 9/59 (15%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 146 GKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWK--VEVNDRQGFVPAAYVKKM 202
++ A++ + + E+ ++ D L + W++ +G PA Y ++
Sbjct: 2 SEQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAIEV 60
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding
protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A
2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A
1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Length = 108
Score = 49.9 bits (120), Expect = 2e-07
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
S D +K+ F D+DKSG + + E K L+ D E +A L D
Sbjct: 39 SLDDVKK---AFYVIDQDKSGFIEEDELKLFLQNFS----PSARALTDAETKAFLADGDK 91
Query: 1549 NRDGHVSLQEYMAFMIS 1565
+ DG + + E+ A + +
Sbjct: 92 DGDGMIGVDEFAAMIKA 108
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform;
phosphorylation, 2D crystalline arrays, myosin
regulation, M light chains, structural protein; 20.00A
{Gallus gallus}
Length = 143
Score = 50.6 bits (122), Expect = 2e-07
Identities = 12/74 (16%), Positives = 27/74 (36%), Gaps = 7/74 (9%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN 1549
D F FD++ SG +++ + L +G D E + + +
Sbjct: 72 TDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRF-------TDEEVDEMYREAPID 124
Query: 1550 RDGHVSLQEYMAFM 1563
+ G+ + E+ +
Sbjct: 125 KKGNFNYVEFTRIL 138
Score = 45.9 bits (110), Expect = 1e-05
Identities = 10/78 (12%), Positives = 30/78 (38%), Gaps = 11/78 (14%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
+ ++EF F D+++ G +++ + L ++G + + L+ +
Sbjct: 2 DQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPT-----------DEYLEGMMS 50
Query: 1549 NRDGHVSLQEYMAFMISK 1566
G ++ ++ K
Sbjct: 51 EAPGPINFTMFLTMFGEK 68
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca
binding, EF-hand, luminescent protein; HET: CZH; 1.10A
{Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A*
1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Length = 195
Score = 52.1 bits (125), Expect = 2e-07
Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 10/98 (10%)
Query: 1469 GMRMQHNLEQQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLP 1528
G + E + ARN+ + + F FDKD SG + E+K+ + G
Sbjct: 91 GWKQLATSELKKWARNEPTLIREWGDAV---FDIFDKDGSGTITLDEWKAYGKISG---- 143
Query: 1529 MVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMISK 1566
+ EA D + G + + E +
Sbjct: 144 ---ISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLGF 178
Score = 45.9 bits (109), Expect = 3e-05
Identities = 12/89 (13%), Positives = 24/89 (26%), Gaps = 7/89 (7%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKS-----CLRALGYDLPMVEEGQPDPEFEAIL 1543
+ +K MF D + +GK+ E S L + EA
Sbjct: 15 NPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKR--HQVCVEAFF 72
Query: 1544 DLVDPNRDGHVSLQEYMAFMISKETRQNS 1572
++ +++ T +
Sbjct: 73 RGCGMEYGKEIAFPQFLDGWKQLATSELK 101
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation,
calcium, metal binding protein; 1.95A {Gallus gallus}
PDB: 2kqy_A
Length = 109
Score = 49.6 bits (119), Expect = 2e-07
Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 7/84 (8%)
Query: 1480 IQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEF 1539
S + D +K+ F D+DKSG + + E + L+ E
Sbjct: 31 FSTVGLSSKTPDQIKKV---FGILDQDKSGFIEEEELQLFLKNFS----SSARVLTSAET 83
Query: 1540 EAILDLVDPNRDGHVSLQEYMAFM 1563
+A L D + DG + ++E+ + +
Sbjct: 84 KAFLAAGDTDGDGKIGVEEFQSLV 107
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand;
1.75A {Physarum polycephalum}
Length = 145
Score = 50.6 bits (122), Expect = 2e-07
Identities = 15/77 (19%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN 1549
+ KE F+ DK+ +G + + E + L LG + E E ++ V +
Sbjct: 72 TEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLG-------DALTSSEVEELMKEVSVS 124
Query: 1550 RDGHVSLQEYMAFMISK 1566
DG ++ + ++ +++
Sbjct: 125 GDGAINYESFVDMLVTG 141
Score = 44.4 bits (106), Expect = 4e-05
Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 7/78 (8%)
Query: 1491 DALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNR 1550
+ + F+ FDKD GK++ E S LR+LG + + E I ++
Sbjct: 2 ASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNP-------TNAELNTIKGQLNAKE 54
Query: 1551 DGHVSLQEYMAFMISKET 1568
+ + I T
Sbjct: 55 FDLATFKTVYRKPIKTPT 72
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15);
calcium binding, signaling domain, NPF binding, FW
binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP:
a.39.1.6
Length = 95
Score = 48.9 bits (117), Expect = 3e-07
Identities = 15/76 (19%), Positives = 24/76 (31%), Gaps = 9/76 (11%)
Query: 1488 VSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVD 1547
VS ++ +F DKD G ++ E + G P I L D
Sbjct: 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGL---------PSTLLAHIWSLCD 54
Query: 1548 PNRDGHVSLQEYMAFM 1563
G +S ++
Sbjct: 55 TKDCGKLSKDQFALAF 70
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo
pealeii}
Length = 191
Score = 51.4 bits (123), Expect = 3e-07
Identities = 10/80 (12%), Positives = 24/80 (30%), Gaps = 9/80 (11%)
Query: 1484 NQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAIL 1543
+ E K + MF D +++ E+ + + G + +A
Sbjct: 99 KGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYGIP---------KSDCDAAF 149
Query: 1544 DLVDPNRDGHVSLQEYMAFM 1563
D + V+ + +
Sbjct: 150 DTLSDGGKTMVTREIFARLW 169
Score = 46.8 bits (111), Expect = 1e-05
Identities = 11/85 (12%), Positives = 31/85 (36%), Gaps = 9/85 (10%)
Query: 1488 VSEDALKEFSMMFK-HFDKDKSGKLNQTEFKSCLRALGYDLPMVEEG--------QPDPE 1538
+S+ + +F +D + G + +F+ ++ + +G
Sbjct: 6 LSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLI 65
Query: 1539 FEAILDLVDPNRDGHVSLQEYMAFM 1563
++ + D N D V+ +E++
Sbjct: 66 WDGLRKYADENEDEQVTKEEWLKMW 90
Score = 44.1 bits (104), Expect = 9e-05
Identities = 12/106 (11%), Positives = 34/106 (32%), Gaps = 2/106 (1%)
Query: 1462 WDQLDQLGMRMQHNLEQQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLR 1521
WD + ++ + + + + + K+ D+++ ++ + E+
Sbjct: 32 WDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMWA 91
Query: 1522 ALGYDLPMVEEGQP--DPEFEAILDLVDPNRDGHVSLQEYMAFMIS 1565
+ E + D+ D + D + EY +S
Sbjct: 92 ECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMS 137
Score = 31.3 bits (71), Expect = 1.8
Identities = 3/35 (8%), Positives = 7/35 (20%), Gaps = 3/35 (8%)
Query: 1487 GVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLR 1521
G+ + F + + F
Sbjct: 139 GIPKSDCDA---AFDTLSDGGKTMVTREIFARLWT 170
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Length = 109
Score = 49.2 bits (118), Expect = 4e-07
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
S D +K+ F D+DKSG + + E K L+ D E +A L D
Sbjct: 40 SADDIKK---AFFVIDQDKSGFIEEDELKLFLQVFS----AGARALTDAETKAFLKAGDS 92
Query: 1549 NRDGHVSLQEYMAFM 1563
+ DG + + E+ A +
Sbjct: 93 DGDGAIGVDEWAALV 107
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase,
transferase, calcium-bindin binding, EF hand, bumped
kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii}
PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A*
3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A*
3ku2_A* 3hx4_A*
Length = 484
Score = 53.5 bits (129), Expect = 4e-07
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 1488 VSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRAL----GYDLPMVEEGQPDPEFEAIL 1543
S+D KE + +F DK+ G+L++ E + L G D M++ + E + +L
Sbjct: 329 TSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVL 388
Query: 1544 DLVDPNRDGHVSLQEYMAFMISKETRQN 1571
D VD +++G++ E++ + ++T +
Sbjct: 389 DAVDFDKNGYIEYSEFVTVAMDRKTLLS 416
Score = 50.1 bits (120), Expect = 4e-06
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 9/66 (13%)
Query: 1498 MMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQ 1557
F+ FD D SGK++ TE + D + +L VD N DG V
Sbjct: 422 RAFRMFDSDNSGKISSTELATIFGVSDVDSETWKS---------VLSEVDKNNDGEVDFD 472
Query: 1558 EYMAFM 1563
E+ +
Sbjct: 473 EFQQML 478
Score = 31.2 bits (71), Expect = 3.5
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Query: 1481 QARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRAL 1523
S V + K + DK+ G+++ EF+ L L
Sbjct: 442 TIFGVSDVDSETWKS---VLSEVDKNNDGEVDFDEFQQMLLKL 481
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 53.6 bits (129), Expect = 4e-07
Identities = 19/84 (22%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALG-YDLPMVEEGQPDPEFEAILDLVD 1547
+ + KE + +FK DK+ G+L++ E L + + E + E + IL VD
Sbjct: 350 TLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVD 409
Query: 1548 PNRDGHVSLQEYMAFMISKETRQN 1571
+++G++ E+++ + K+ +
Sbjct: 410 FDKNGYIEYSEFISVCMDKQILFS 433
Score = 51.2 bits (123), Expect = 2e-06
Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 9/74 (12%)
Query: 1498 MMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQ 1557
F FD DKSGK+ + E + + + +L D N+D +
Sbjct: 439 RAFNLFDTDKSGKITKEELANLFG---------LTSISEKTWNDVLGEADQNKDNMIDFD 489
Query: 1558 EYMAFMISKETRQN 1571
E+++ M +
Sbjct: 490 EFVSMMHKICDHKT 503
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN
membrane targeting, EF-hand, cell projection, cilium;
2.00A {Trypanosoma cruzi}
Length = 219
Score = 51.4 bits (123), Expect = 4e-07
Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 9/78 (11%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
L MF D + +++ EFK + L G + A+ +D
Sbjct: 128 DFFELTV---MFDEIDASGNMLVDEEEFKRAVPKLE------AWGAKVEDPAALFKELDK 178
Query: 1549 NRDGHVSLQEYMAFMISK 1566
N G V+ E+ A+ +
Sbjct: 179 NGTGSVTFDEFAAWASAV 196
Score = 44.1 bits (104), Expect = 1e-04
Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 3/82 (3%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQP---DPEFEAILDL 1545
+ +A + +FK FDK+++GKL E S + + ++
Sbjct: 43 TAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLG 102
Query: 1546 VDPNRDGHVSLQEYMAFMISKE 1567
G E++ F +
Sbjct: 103 SKLENKGSEDFVEFLEFRLMLC 124
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal
transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB:
2jc2_A
Length = 198
Score = 51.3 bits (123), Expect = 4e-07
Identities = 15/76 (19%), Positives = 29/76 (38%), Gaps = 9/76 (11%)
Query: 1493 LKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDG 1552
L + F FD D+SG ++ E + L +G+ L +I +G
Sbjct: 102 LNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRL-------SPQAVNSIAKRYS--TNG 152
Query: 1553 HVSLQEYMAFMISKET 1568
++ +Y+A +
Sbjct: 153 KITFDDYIACCVKLRA 168
Score = 38.2 bits (89), Expect = 0.008
Identities = 9/73 (12%), Positives = 22/73 (30%), Gaps = 3/73 (4%)
Query: 1495 EFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHV 1554
F + G+++ E + CL G + ++ ++D + G +
Sbjct: 34 PLYGYFA-AVAGQDGQIDADELQRCLTQSGIAGG--YKPFNLETCRLMVSMLDRDMSGTM 90
Query: 1555 SLQEYMAFMISKE 1567
E+
Sbjct: 91 GFNEFKELWAVLN 103
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand,
calcium-binding protein, guanylyl cyclase regulation,
lyase; NMR {Bos taurus} SCOP: a.39.1.5
Length = 204
Score = 51.3 bits (123), Expect = 4e-07
Identities = 21/95 (22%), Positives = 34/95 (35%), Gaps = 11/95 (11%)
Query: 1470 MRMQHNLEQQIQARNQSGVSEDALKEFSMMFKHF-DKDKSGKLNQTEFKSCLRALGYDLP 1528
M Q + E+ + L+E +K F ++ SG L EFK +
Sbjct: 1 MGQQFSWEEAEENGAVGAADAAQLQE---WYKKFLEECPSGTLFMHEFKRFFKVPDN--- 54
Query: 1529 MVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFM 1563
+ EA+ D N D + EY+A +
Sbjct: 55 ----EEATQYVEAMFRAFDTNGDNTIDFLEYVAAL 85
Score = 44.4 bits (105), Expect = 9e-05
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 13/87 (14%)
Query: 1487 GVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMV----------EEGQPD 1536
G E LK FK +DKD++G +++ E + ++ + P+
Sbjct: 91 GTLEHKLKW---TFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPE 147
Query: 1537 PEFEAILDLVDPNRDGHVSLQEYMAFM 1563
+ I LVD N DG +SL E++
Sbjct: 148 EVVDRIFLLVDENGDGQLSLNEFVEGA 174
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A
{Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C*
1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C
3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z
2otg_C* 2os8_C* 3pn7_C ...
Length = 156
Score = 50.2 bits (121), Expect = 5e-07
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 9/79 (11%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN 1549
+ ++ FK FD++ G ++ E + L ALG E D + + I+ L D
Sbjct: 80 QGTFADYMEAFKTFDREGQGFISGAELRHVLTALG-------ERLSDEDVDEIIKLTDLQ 132
Query: 1550 RD--GHVSLQEYMAFMISK 1566
D G+V ++++ +++
Sbjct: 133 EDLEGNVKYEDFVKKVMAG 151
Score = 45.6 bits (109), Expect = 2e-05
Identities = 11/80 (13%), Positives = 29/80 (36%), Gaps = 10/80 (12%)
Query: 1489 SEDALKEFSMMFKHFD--KDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLV 1546
S+D + + +F+ FD + G ++ + R LG + + + A+
Sbjct: 4 SQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINP-------RNEDVFAVGG-T 55
Query: 1547 DPNRDGHVSLQEYMAFMISK 1566
+ + +E++
Sbjct: 56 HKMGEKSLPFEEFLPAYEGL 75
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein;
HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB:
1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Length = 191
Score = 51.0 bits (122), Expect = 5e-07
Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 10/96 (10%)
Query: 1469 GMRMQHNLEQQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLP 1528
G + E + A+N+ + +F DKD++G + E+K+ +A G
Sbjct: 87 GWKKLATDELEKYAKNEPTLIRIWGDA---LFDIVDKDQNGAITLDEWKAYTKAAG---- 139
Query: 1529 MVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFMI 1564
Q + E + D + G + + E +
Sbjct: 140 ---IIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL 172
Score = 44.4 bits (105), Expect = 8e-05
Identities = 11/89 (12%), Positives = 20/89 (22%), Gaps = 7/89 (7%)
Query: 1483 RNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEF-----KSCLRALGYDLPMVEEGQPDP 1537
+ + MF D + +GK++ E + LG +
Sbjct: 5 LTSDFDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKR--HKD 62
Query: 1538 EFEAILDLVDPNRDGHVSLQEYMAFMISK 1566
EA Y+
Sbjct: 63 AVEAFFGGAGMKYGVETDWPAYIEGWKKL 91
>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 94
Score = 48.3 bits (115), Expect = 5e-07
Identities = 11/65 (16%), Positives = 22/65 (33%), Gaps = 6/65 (9%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKD----WWK--VEVNDRQGFVPAAY 198
E + +Y YT ++ E+ + D + + W G +P Y
Sbjct: 14 ANHETLQVIYPYTPQNDDELELVPGDFIFMSPMEQTSTSEGWIYGTSLTTGCSGLLPENY 73
Query: 199 VKKME 203
+ K +
Sbjct: 74 ITKAD 78
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell
junction, cell projection, coiled coil, endocytosis,
membrane, phosphoprotein; NMR {Homo sapiens}
Length = 111
Score = 48.6 bits (116), Expect = 5e-07
Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Query: 1488 VSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVD 1547
V + + ++ +F DK SG L + ++ L P + +I +L D
Sbjct: 8 VPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQSSL---------PQAQLASIWNLSD 58
Query: 1548 PNRDGHVSLQEYMAFM 1563
++DG ++ +E++ M
Sbjct: 59 IDQDGKLTAEEFILAM 74
Score = 29.0 bits (65), Expect = 3.9
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 8/51 (15%)
Query: 1485 QSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCL----RAL-GYDLPMV 1530
QS + + L ++ D D+ GKL EF + A+ G LP V
Sbjct: 42 QSSLPQAQLAS---IWNLSDIDQDGKLTAEEFILAMHLIDVAMSGQPLPPV 89
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma
lanceolatum} SCOP: a.39.1.5
Length = 185
Score = 50.7 bits (121), Expect = 6e-07
Identities = 11/89 (12%), Positives = 24/89 (26%), Gaps = 10/89 (11%)
Query: 1476 LEQQIQARNQSGVSEDALKEF-SMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQ 1534
E+ I + +FK D G ++ EF++ +
Sbjct: 86 WEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQ-------- 137
Query: 1535 PDPEFEAILDLVDPNRDGHVSLQEYMAFM 1563
+ A+ +++ L Y
Sbjct: 138 -CADVPAVYNVITDGGKVTFDLNRYKELY 165
Score = 45.7 bits (108), Expect = 2e-05
Identities = 16/86 (18%), Positives = 33/86 (38%), Gaps = 9/86 (10%)
Query: 1487 GVSEDALKEFSMMFKHF-DKDKSGKLNQTEFKSCLRALGY------DLPMVEEGQ--PDP 1537
G+++ ++ F F D + G + +F+ + + Q +
Sbjct: 1 GLNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLED 60
Query: 1538 EFEAILDLVDPNRDGHVSLQEYMAFM 1563
E+ + D N+D VS +EY+A
Sbjct: 61 EWRDLKGRADINKDDVVSWEEYLAMW 86
Score = 41.4 bits (97), Expect = 8e-04
Identities = 12/106 (11%), Positives = 35/106 (33%), Gaps = 2/106 (1%)
Query: 1462 WDQLDQLGMRMQHNLEQQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLR 1521
+ + + R + + + + + E+ + D +K ++ E+ +
Sbjct: 28 DNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMWE 87
Query: 1522 ALGYDLPMVEEGQP--DPEFEAILDLVDPNRDGHVSLQEYMAFMIS 1565
V + + +D + DG V L+E+ + +
Sbjct: 88 KTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKN 133
Score = 30.7 bits (69), Expect = 3.0
Identities = 1/35 (2%), Positives = 7/35 (20%), Gaps = 3/35 (8%)
Query: 1487 GVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLR 1521
+ + ++ + +K
Sbjct: 135 QLQCADVPA---VYNVITDGGKVTFDLNRYKELYY 166
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal
binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB:
1k95_A 1f4q_A 1f4o_A
Length = 165
Score = 50.1 bits (120), Expect = 6e-07
Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 9/76 (11%)
Query: 1493 LKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDG 1552
L + F D+D SG + E + + +GY L I+ ++G
Sbjct: 69 LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRL-------SPQTLTTIVKRYS--KNG 119
Query: 1553 HVSLQEYMAFMISKET 1568
+ +Y+A +
Sbjct: 120 RIFFDDYVACCVKLRA 135
Score = 39.3 bits (92), Expect = 0.003
Identities = 8/71 (11%), Positives = 25/71 (35%), Gaps = 4/71 (5%)
Query: 1499 MFKHFDK--DKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSL 1556
++ +F + G+++ E + CL G + ++ ++D + G +
Sbjct: 2 VYTYFSAVAGQDGEVDAEELQRCLTQSGINGT--YSPFSLETCRIMIAMLDRDHTGKMGF 59
Query: 1557 QEYMAFMISKE 1567
+ +
Sbjct: 60 NAFKELWAALN 70
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent
kinase, structural genomics, structural GE consortium,
SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Length = 191
Score = 50.4 bits (121), Expect = 7e-07
Identities = 18/87 (20%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLP--MVEEGQ--PDPEFEAILD 1544
+ + KE + +F+ D + G+L++ E R L + + + E + IL
Sbjct: 35 TLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQ 94
Query: 1545 LVDPNRDGHVSLQEYMAFMISKETRQN 1571
VD +R+G++ E++ + K+ +
Sbjct: 95 SVDFDRNGYIEYSEFVTVCMDKQLLLS 121
Score = 48.4 bits (116), Expect = 4e-06
Identities = 19/75 (25%), Positives = 27/75 (36%), Gaps = 12/75 (16%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
S + L F+ FD D SGK+ E D + +L D
Sbjct: 121 SRERLLA---AFQQFDSDGSGKITNEELGRL---------FGVTEVDDETWHQVLQECDK 168
Query: 1549 NRDGHVSLQEYMAFM 1563
N DG V +E++ M
Sbjct: 169 NNDGEVDFEEFVEMM 183
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus
gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B*
1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B*
1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Length = 166
Score = 49.9 bits (120), Expect = 8e-07
Identities = 13/78 (16%), Positives = 23/78 (29%), Gaps = 7/78 (8%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN 1549
D FK D D G + ++ + L G E + + P+
Sbjct: 91 ADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGG-------GRFTPEEIKNMWAAFPPD 143
Query: 1550 RDGHVSLQEYMAFMISKE 1567
G+V + + E
Sbjct: 144 VAGNVDYKNICYVITHGE 161
Score = 49.1 bits (118), Expect = 1e-06
Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 10/78 (12%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
E +++F F D++ G +++ + + A+G EE LD +
Sbjct: 20 DETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEE----------LDAMIK 69
Query: 1549 NRDGHVSLQEYMAFMISK 1566
G ++ ++ K
Sbjct: 70 EASGPINFTVFLTMFGEK 87
>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 79
Score = 47.0 bits (112), Expect = 1e-06
Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 150 VIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEV--NDRQGFVPAAYVKKME 203
V + K EV+++++DV+ +L W E + G+ P + + +
Sbjct: 20 VEITKAFFAKQADEVTLQQADVVLVL-QQEDGWLYGERLRDGETGWFPEDFARFIS 74
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS
signal transduction, endocytosis/exocytosis complex; NMR
{Mus musculus} SCOP: a.39.1.6
Length = 92
Score = 47.0 bits (112), Expect = 1e-06
Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 9/76 (11%)
Query: 1488 VSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVD 1547
++++ + + FK D +G + + K P E I +L D
Sbjct: 3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK---------LPILELSHIWELSD 53
Query: 1548 PNRDGHVSLQEYMAFM 1563
++DG ++L E+ A
Sbjct: 54 FDKDGALTLDEFCAAF 69
Score = 28.1 bits (63), Expect = 6.0
Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 8/51 (15%)
Query: 1485 QSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCL----RAL-GYDLPMV 1530
+S + L +++ D DK G L EF + GYDLP
Sbjct: 37 KSKLPILELSH---IWELSDFDKDGALTLDEFCAAFHLVVARKNGYDLPEK 84
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V,
chicken, molecular motor, ATPase, ELC, IQ motif, muscle
protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP:
a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B*
1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Length = 151
Score = 48.7 bits (117), Expect = 1e-06
Identities = 15/77 (19%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
+ +++ F+ FDK+ +GK+ E + L LG + + E E +L
Sbjct: 82 GQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKM-------TEEEVETVLA-GHE 133
Query: 1549 NRDGHVSLQEYMAFMIS 1565
+ +G ++ + ++ ++S
Sbjct: 134 DSNGCINYEAFLKHILS 150
Score = 46.0 bits (110), Expect = 1e-05
Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLV-- 1546
++D L+EF F+ FD+ GK+ ++ +RALG + + E +L
Sbjct: 5 NKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNP-------TNAEVLKVLGNPKS 57
Query: 1547 DPNRDGHVSLQEYMAFM 1563
D + V + ++ +
Sbjct: 58 DELKSRRVDFETFLPML 74
>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange
factor, autoinhibition, domain-swapped, cell junction,
cell project endocytosis; 2.40A {Mus musculus} PDB:
3gf9_A
Length = 283
Score = 50.9 bits (122), Expect = 1e-06
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 146 GKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEAG 205
G VI +YDYT ++ E++ K ++ +LN + DWWK EV+ + G P+ YVK
Sbjct: 1 GSCQVIGMYDYTAQNDDELAFSKGQIINVLNKEDPDWWKGEVSGQVGLFPSNYVKLTTDM 60
Query: 206 LTASQQNLADVKEVKILETANDIQERREQVLN 237
+ Q ++ +L+ + +R+ ++
Sbjct: 61 DPSQQ----WCSDLHLLDMLTPTERKRQGYIH 88
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase
activating protein, GCAP, GCAP3, GCAP-3, lyase activator;
3.00A {Homo sapiens}
Length = 211
Score = 49.8 bits (119), Expect = 2e-06
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 1487 GVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLV 1546
E LK FK +D D +G +++ E A+ L + P+ + +
Sbjct: 89 EKMEQKLKW---YFKLYDADGNGSIDKNELLDMFMAV-QALNGQQTLSPEEFINLVFHKI 144
Query: 1547 DPNRDGHVSLQEYMAFM 1563
D N DG ++L+E++ M
Sbjct: 145 DINNDGELTLEEFINGM 161
Score = 49.0 bits (117), Expect = 3e-06
Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 8/90 (8%)
Query: 1477 EQQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPD 1536
+ A +Q V + F + SG EFK+ L G + +
Sbjct: 5 NGKSIAGDQKAVPTQETHVWYRTFM--MEYPSGLQTLHEFKTLLGLQG------LNQKAN 56
Query: 1537 PEFEAILDLVDPNRDGHVSLQEYMAFMISK 1566
+ + + D N+DG V E++A +
Sbjct: 57 KHIDQVYNTFDTNKDGFVDFLEFIAAVNLI 86
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1
EH domain, riken structural genomics/proteomics
initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Length = 110
Score = 46.7 bits (111), Expect = 3e-06
Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 9/76 (11%)
Query: 1488 VSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVD 1547
++E+ + + F+ D S ++ + K+ + PE I +L D
Sbjct: 16 ITEEQREYYVNQFRSLQPDPSSFISGSVAKN---------FFTKSKLSIPELSYIWELSD 66
Query: 1548 PNRDGHVSLQEYMAFM 1563
+ DG ++L E+ A
Sbjct: 67 ADCDGALTLPEFCAAF 82
>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D
of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis,
membrane, phagocytosis; NMR {Homo sapiens}
Length = 119
Score = 47.0 bits (111), Expect = 3e-06
Identities = 12/77 (15%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Query: 131 AQSCRQQETPVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEV--- 187
S + + +A+Y++ ++S++ DV+ + + DW++ +
Sbjct: 43 RGSSGSSGSSGSSGDKERHGVAIYNFQGSGAPQLSLQIGDVVRIQETCG-DWYRGYLIKH 101
Query: 188 NDRQGFVPAAYVKKMEA 204
QG P +++ E
Sbjct: 102 KMLQGIFPKSFIHIKEV 118
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding,
phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Length = 167
Score = 48.1 bits (115), Expect = 3e-06
Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 9/76 (11%)
Query: 1493 LKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDG 1552
L + F FD D+SG ++ E + L +G+ L +I G
Sbjct: 71 LNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRL-------NPQTVNSIAKRYS--TSG 121
Query: 1553 HVSLQEYMAFMISKET 1568
++ +Y+A +
Sbjct: 122 KITFDDYIACCVKLRA 137
Score = 34.7 bits (80), Expect = 0.12
Identities = 9/69 (13%), Positives = 22/69 (31%), Gaps = 3/69 (4%)
Query: 1495 EFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHV 1554
F + G+++ E + CL G + ++ ++D + G +
Sbjct: 3 PLYGYFASV-AGQDGQIDADELQRCLTQSGIAGG--YKPFNLETCRLMVSMLDRDMSGTM 59
Query: 1555 SLQEYMAFM 1563
E+
Sbjct: 60 GFNEFKELW 68
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory
light chain LC-2, mantle muscle; rigor-like, squid,
contractIle protein; 2.60A {Todarodes pacificus} PDB:
2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Length = 159
Score = 48.0 bits (115), Expect = 3e-06
Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVD-- 1547
A EF FK FD++ G ++ E ++ L+ LG E + + I D
Sbjct: 81 GTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLG-------ERITEDQCNDIFTFCDIR 133
Query: 1548 PNRDGHVSLQEYMAFMISK 1566
+ DG++ ++ M +++
Sbjct: 134 EDIDGNIKYEDLMKKVMAG 152
Score = 41.0 bits (97), Expect = 7e-04
Identities = 12/77 (15%), Positives = 27/77 (35%), Gaps = 10/77 (12%)
Query: 1489 SEDALKEFSMMFKHFD--KDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLV 1546
++D ++E +F FD + G ++ + LR LG + + +
Sbjct: 4 TKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNP-------TEAQVHQHGG-T 55
Query: 1547 DPNRDGHVSLQEYMAFM 1563
+ L+E +
Sbjct: 56 KKMGEKAYKLEEILPIY 72
>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus}
SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B
Length = 115
Score = 46.6 bits (110), Expect = 4e-06
Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 15/69 (21%)
Query: 150 VIALYDYTEKSPREVSMKKSDVLTLLNSNNKD-----WWK----------VEVNDRQGFV 194
V A +DYT E+ +K DV+ ++ N + W E+ +G
Sbjct: 47 VQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVF 106
Query: 195 PAAYVKKME 203
P + ++++
Sbjct: 107 PENFTERVQ 115
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein,
regulation, complex, calcium, EF- hand, calmodulin,
ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis
thaliana}
Length = 135
Score = 46.9 bits (112), Expect = 4e-06
Identities = 12/74 (16%), Positives = 25/74 (33%), Gaps = 6/74 (8%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN 1549
E+ + E F + + + LG EG + + ++ D +
Sbjct: 36 EEFVSELCKGFSLLADPERHLITAESLRRNSGILG------IEGMSKEDAQGMVREGDLD 89
Query: 1550 RDGHVSLQEYMAFM 1563
DG ++ E+ M
Sbjct: 90 GDGALNQTEFCVLM 103
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to
SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis
thaliana} PDB: 1v1g_A 1v1f_A
Length = 207
Score = 48.6 bits (116), Expect = 4e-06
Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 1500 FKHFDKDKSGKLNQTEFKSCLRAL-GYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQE 1558
FK +D ++G + + E K + AL ++ E + + D DG + + E
Sbjct: 117 FKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDE 176
Query: 1559 YMAFM 1563
+ F+
Sbjct: 177 WKDFV 181
Score = 40.9 bits (96), Expect = 0.001
Identities = 13/89 (14%), Positives = 32/89 (35%), Gaps = 10/89 (11%)
Query: 1475 NLEQQIQARNQSGVSEDALKEFSMMFKHFDKD--KSGKLNQTEFKSCLRALGYDLPMVEE 1532
E + + + + ++ +FK G +++ EF+ L
Sbjct: 18 GYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRN--------R 69
Query: 1533 GQPDPEFEAILDLVDPNRDGHVSLQEYMA 1561
+ + + I D+ D R+G + E++
Sbjct: 70 NRRNLFADRIFDVFDVKRNGVIEFGEFVR 98
Score = 29.7 bits (67), Expect = 6.4
Identities = 9/45 (20%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 1478 QQIQARNQSGVSEDALKEF-SMMFKHFDKDKSGKLNQTEFKSCLR 1521
+ ++ +SED ++ F D+ GK++ E+K +
Sbjct: 138 VALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVS 182
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein,
calcium-binding protein, NHE1 regulating protein; 2.70A
{Homo sapiens}
Length = 202
Score = 48.2 bits (115), Expect = 4e-06
Identities = 15/88 (17%), Positives = 36/88 (40%), Gaps = 11/88 (12%)
Query: 1476 LEQQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQP 1535
+ R ++G S+ +L F+ D++K G L++ + + + AL
Sbjct: 11 IPDGDSIRRETGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQ-IGALAV---------- 59
Query: 1536 DPEFEAILDLVDPNRDGHVSLQEYMAFM 1563
+P + I++ P+ V ++ +
Sbjct: 60 NPLGDRIIESFFPDGSQRVDFPGFVRVL 87
Score = 44.4 bits (105), Expect = 9e-05
Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 5/98 (5%)
Query: 1477 EQQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPD 1536
Q + + L F+ +D D+ GK+++ E LR + V E Q +
Sbjct: 100 TQDPKKPEPLNSRRNKLHY---AFQLYDLDRDGKISRHEMLQVLRLMVGV--QVTEEQLE 154
Query: 1537 PEFEAILDLVDPNRDGHVSLQEYMAFMISKETRQNSSL 1574
+ + D + DG VS E+ + + Q S+
Sbjct: 155 NIADRTVQEADEDGDGAVSFVEFTKSLEKMDVEQKMSI 192
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein
targeting, AKA beta-augmentation, calmodulin-binding,
membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B*
2p6b_B 1aui_B 1m63_B* 1tco_B*
Length = 155
Score = 47.2 bits (113), Expect = 5e-06
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 13/90 (14%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDL--- 1545
E L+ F+ +D DK G ++ E L+ MV D + + I+D
Sbjct: 73 KEQKLRF---AFRIYDMDKDGYISNGELFQVLKM------MVGNNLKDTQLQQIVDKTII 123
Query: 1546 -VDPNRDGHVSLQEYMAFMISKETRQNSSL 1574
D + DG +S +E+ A + + + +
Sbjct: 124 NADKDGDGRISFEEFCAVVGGLDIHKKMVV 153
Score = 46.1 bits (110), Expect = 1e-05
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 11/83 (13%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN 1549
D +K FK D D SG L+ EF S L L +P + ++D+ D +
Sbjct: 2 ADEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQ----------QNPLVQRVIDIFDTD 50
Query: 1550 RDGHVSLQEYMAFMISKETRQNS 1572
+G V +E++ + + +
Sbjct: 51 GNGEVDFKEFIEGVSQFSVKGDK 73
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand
(helix-loop-helix) calcium binding protein, four-HEL
domain, protein engineering; HET: FME; 1.44A {Bos taurus}
SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A
4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A
1b1g_A 2bcb_A 1boc_A 1bod_A
Length = 76
Score = 44.5 bits (106), Expect = 7e-06
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Query: 1489 SEDALKEFSMMFKHFDKD--KSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLV 1546
S + +K F+ F ++++ E K ++ LG L + +++ V
Sbjct: 3 SPEEIKGA---FEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMS-----TLDEMIEEV 54
Query: 1547 DPNRDGHVSLQEYMAFM 1563
D N DG VS +E++ M
Sbjct: 55 DKNGDGEVSFEEFLVMM 71
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A
{Rattus norvegicus} PDB: 2e30_A
Length = 208
Score = 47.8 bits (114), Expect = 7e-06
Identities = 14/87 (16%), Positives = 36/87 (41%), Gaps = 11/87 (12%)
Query: 1477 EQQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPD 1536
E+ + + ++G S + F DK ++G L++ +F+ + E +
Sbjct: 12 EELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQR-----------IPELAIN 60
Query: 1537 PEFEAILDLVDPNRDGHVSLQEYMAFM 1563
P + I++ + V+ + +M +
Sbjct: 61 PLGDRIINAFFSEGEDQVNFRGFMRTL 87
Score = 42.8 bits (101), Expect = 3e-04
Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 1495 EFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHV 1554
+ F+ +D DK K+++ E LR + + + +E Q + + D + D +
Sbjct: 114 KLHFAFRLYDLDKDDKISRDELLQVLRMM-VGVNISDE-QLGSIADRTIQEADQDGDSAI 171
Query: 1555 SLQEYMAFMISKETRQNSSL 1574
S E++ + + Q S+
Sbjct: 172 SFTEFVKVLEKVDVEQKMSI 191
>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3
domain, structural genomics center for structural
genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A*
1x27_A*
Length = 175
Score = 47.4 bits (112), Expect = 7e-06
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 137 QETPVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVE--VNDRQGFV 194
P VIAL+ Y ++ +K + L +L + +WWK + ++GF+
Sbjct: 2 GSNPPASPLQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSG-EWWKAQSLTTGQEGFI 60
Query: 195 PAAYVKKM 202
P +V K
Sbjct: 61 PFNFVAKA 68
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase,
transferase, calcium-bindin binding, bumped kinase
inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum}
PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 49.3 bits (118), Expect = 7e-06
Identities = 15/91 (16%), Positives = 36/91 (39%), Gaps = 7/91 (7%)
Query: 1488 VSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYD-------LPMVEEGQPDPEFE 1540
+ D K+ + +F+ D + G L++ E L E + + +
Sbjct: 325 TTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQID 384
Query: 1541 AILDLVDPNRDGHVSLQEYMAFMISKETRQN 1571
+++ L+D + G + E++A I + +
Sbjct: 385 SLMPLLDMDGSGSIEYSEFIASAIDRTILLS 415
Score = 49.3 bits (118), Expect = 8e-06
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Query: 1498 MMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQ 1557
FK FDKD SGK++ E + E E+I++ VD N+DG V
Sbjct: 421 RAFKMFDKDGSGKISTKELFKLFSQADSSIQ-------MEELESIIEQVDNNKDGEVDFN 473
Query: 1558 EYMAFM 1563
E++ +
Sbjct: 474 EFVEML 479
Score = 30.4 bits (69), Expect = 4.7
Identities = 8/44 (18%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 1478 QQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLR 1521
++ ++ S + + L+ + + D +K G+++ EF L+
Sbjct: 440 FKLFSQADSSIQMEELES---IIEQVDNNKDGEVDFNEFVEMLQ 480
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR
{Schizosaccharomyces pombe} SCOP: a.39.1.5
Length = 140
Score = 46.0 bits (110), Expect = 8e-06
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN 1549
+EF F+ FDKD +G + E + L +LG E + E + +L V
Sbjct: 72 PGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLG-------EKLSNEEMDELLKGVPVK 124
Query: 1550 RDGHVSLQEYMAFMIS 1565
DG V+ +++ +++
Sbjct: 125 -DGMVNYHDFVQMILA 139
Score = 44.8 bits (107), Expect = 3e-05
Identities = 11/72 (15%), Positives = 27/72 (37%), Gaps = 11/72 (15%)
Query: 1495 EFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHV 1554
+ F FD+ +G++ +T LRA G + A + ++ V
Sbjct: 6 PYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPT-----------LAEITEIESTLPAEV 54
Query: 1555 SLQEYMAFMISK 1566
+++++ +
Sbjct: 55 DMEQFLQVLNRP 66
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus
gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F*
1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C*
1o1g_C*
Length = 149
Score = 46.0 bits (110), Expect = 1e-05
Identities = 15/80 (18%), Positives = 30/80 (37%), Gaps = 9/80 (11%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
S+ A +F F FD+ K+ ++ RALG + + E IL
Sbjct: 3 SKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNP-------TNAEINKILGNPSK 55
Query: 1549 NR--DGHVSLQEYMAFMISK 1566
++ +E++ + +
Sbjct: 56 EEMNAAAITFEEFLPMLQAA 75
Score = 44.1 bits (105), Expect = 5e-05
Identities = 14/76 (18%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN 1549
+ ++F + FDK+ +G + E + L LG E + E E ++ + +
Sbjct: 81 QGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLG-------EKMTEEEVEELMKGQE-D 132
Query: 1550 RDGHVSLQEYMAFMIS 1565
+G ++ + ++ ++S
Sbjct: 133 SNGCINYEAFVKHIMS 148
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II,
calcium/phospholipid binding protein,
calcium-phospholipid protein complex; 2.25A {Homo
sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Length = 96
Score = 44.4 bits (105), Expect = 1e-05
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPE-FEAILDLVDP 1548
E A++ F F DK G L + + + + + P E Q DP + I+ +D
Sbjct: 5 EHAMETMMFTFHKFAGDK-GYLTKEDLRVLMEK---EFPGFLENQKDPLAVDKIMKDLDQ 60
Query: 1549 NRDGHVSLQEYMAFM 1563
RDG V Q + + +
Sbjct: 61 CRDGKVGFQSFFSLI 75
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like,
squid, contractIle protein; 2.60A {Todarodes pacificus}
PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Length = 153
Score = 45.6 bits (109), Expect = 1e-05
Identities = 11/78 (14%), Positives = 22/78 (28%), Gaps = 8/78 (10%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN 1549
D F FD+D G + + K L +G + E + +
Sbjct: 81 TDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNF-------SKEEIKNVWKDAPLK 133
Query: 1550 RDGHVSLQEYMAFMISKE 1567
+ + + + E
Sbjct: 134 -NKQFNYNKMVDIKGKAE 150
Score = 43.7 bits (104), Expect = 8e-05
Identities = 17/86 (19%), Positives = 33/86 (38%), Gaps = 11/86 (12%)
Query: 1481 QARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFE 1540
+A + +S+ ++E F D+D+ G + + K +LG PD E
Sbjct: 3 EAPRRVKLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVP-------PDDELN 55
Query: 1541 AILDLVDPNRDGHVSLQEYMAFMISK 1566
A+L G ++ ++ K
Sbjct: 56 AMLKEC----PGQLNFTAFLTLFGEK 77
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion,
structural genomics, PSI, protein structur initiative,
structural genomics of pathogenic protozoa CONS SGPP;
1.70A {Plasmodium falciparum} PDB: 2auc_A
Length = 146
Score = 44.9 bits (107), Expect = 2e-05
Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN 1549
+D ++E MF HFD + +G L +++ K+ L G L D E L+
Sbjct: 80 KDNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDAL-------TDQEAIDALNAFS-- 130
Query: 1550 RDGHVSLQEYMAFMI 1564
+ ++ + + ++
Sbjct: 131 SEDNIDYKLFCEDIL 145
Score = 44.5 bits (106), Expect = 3e-05
Identities = 9/78 (11%), Positives = 24/78 (30%), Gaps = 11/78 (14%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
E+ + E + +K GK++ R LG +
Sbjct: 10 LEEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPS-----------SIDEKKIKE 58
Query: 1549 NRDGHVSLQEYMAFMISK 1566
+++ ++Y+ ++
Sbjct: 59 LYGDNLTYEQYLEYLSIC 76
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment
2, heavy meromyosin, essential light chain, motor
protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1
PDB: 3j04_A 3dtp_B 3dtp_A
Length = 1184
Score = 47.9 bits (114), Expect = 3e-05
Identities = 45/312 (14%), Positives = 120/312 (38%), Gaps = 19/312 (6%)
Query: 220 KILETANDIQERREQVLNRYADFKSEARSKREKLEDITVKEVKILETANDIQERREQVLN 279
E +ER+++ + + + E+ + K E + +E R ++
Sbjct: 861 AKDEELQRTKERQQKAEAELKELEQKHTQLCEEKNLLQEKLQAETELYAEAEEMRVRLAA 920
Query: 280 RYADFKSEARSKREKLEDS-RRFQYFKRDADELESWIYEKLQAASDESYKETTNLQAKIQ 338
+ + + ++E+ R Q + + +++ + + L+ +E E Q
Sbjct: 921 KKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLD-LEEQLEE---EEAARQKLQL 976
Query: 339 KHQAFEAEVAAHSNAIVVLDNTGNDFYRDCEQAENWMSAREAFLNAEEVDSKTDNVEALI 398
+ + ++ + I+++++ N ++ + E +S L EE K N+ L
Sbjct: 977 EKVTADGKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEE--EKAKNLTKLK 1034
Query: 399 KKHE----DFDKAINAHEEKIGALQTLADQLIAADHYAAKPIDDKRKQVLDRWRLLKEAL 454
KHE + + + E+ L+ + +L + I + + Q+ + LK L
Sbjct: 1035 NKHESMISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAELQAQIAE----LKAQL 1090
Query: 455 IEKRSRLGESQTLQQFSRDADEMENWIAEK--LQLATEESYKDPANIQSKHQKHQAFEAE 512
+K L L + + + N + + L+ + +D + ++ K + + +
Sbjct: 1091 AKKEEEL--QAALARLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQKRD 1148
Query: 513 LAANADRIQSVL 524
L+ + +++ L
Sbjct: 1149 LSEELEALKTEL 1160
Score = 37.1 bits (86), Expect = 0.054
Identities = 30/182 (16%), Positives = 60/182 (32%), Gaps = 16/182 (8%)
Query: 1298 EEIRALREAHAQFQASLSSAQADFEAL----AALDQQIKSFNVGPNPYTWFTMEA----- 1348
+E + L E + +L+ + + L + I V E
Sbjct: 1004 KERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKIKR 1063
Query: 1349 -LEDTWRNLQKIIKERDIELA----KEATRQDENDALRKEFAKHANAFHQWLTETRTSMM 1403
LE +L + I E ++A + A +++E A + + + +
Sbjct: 1064 KLEGESSDLHEQIAELQAQIAELKAQLAKKEEELQAALARLEDETSQKNN-ALKKIRELE 1122
Query: 1404 EGTGSLEQQLEAIKRKAAEVRSRRSDLK-KIEDLGAILEEHLILDNRYTEHSTVGLAQQW 1462
L++ LE+ K + ++ DL ++E L LE+ L E
Sbjct: 1123 SHISDLQEDLESEKAARNKAEKQKRDLSEELEALKTELEDTLDTTATQQELRGSDYKDDD 1182
Query: 1463 DQ 1464
D+
Sbjct: 1183 DK 1184
Score = 36.0 bits (83), Expect = 0.15
Identities = 34/264 (12%), Positives = 93/264 (35%), Gaps = 26/264 (9%)
Query: 201 KMEAGLTASQQNLADVKEVKILETANDIQERREQVLNRYADFKSEARSKREKLEDITVKE 260
+ E + Q + ++L+ ++E + E + K++ +
Sbjct: 937 EEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAAR----QKLQLEKVTADGKIKKMEDDI 992
Query: 261 VKILETANDIQERREQVLNRYADFKSEARSKREKLEDSRRFQY-FKRDADELESWIYEKL 319
+ + + N + + R+ + R +D + + EK ++ + + + ELE +L
Sbjct: 993 LIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELE----VRL 1048
Query: 320 QAASDESYKETTNLQAKIQKHQAFEAEVAAHSNAIVVLDNTGNDFYRDCEQAENWMSARE 379
+ KE + Q + + E E + I L + + ++ +E
Sbjct: 1049 K-------KEEKSRQELEKIKRKLEGESSDLHEQIAELQA-------QIAELKAQLAKKE 1094
Query: 380 AFLNA--EEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADHYAAKPID 437
L A ++ +T +KK + + I+ +E + + + ++ ++ ++
Sbjct: 1095 EELQAALARLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQKRDLSEELE 1154
Query: 438 DKRKQVLDRWRLLKEALIEKRSRL 461
+ + L+ E R
Sbjct: 1155 ALKTE-LEDTLDTTATQQELRGSD 1177
>2zfd_A Calcineurin B-like protein 2; calcium binding protein,
protein-protein complex, ATP-bindin kinase,
nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP:
a.39.1.5 PDB: 1uhn_A
Length = 226
Score = 44.8 bits (106), Expect = 7e-05
Identities = 11/65 (16%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 1500 FKHFDKDKSGKLNQTEFKSCLRALGYDLPM-VEEGQPDPEFEAILDLVDPNRDGHVSLQE 1558
F+ +D + G + + E K + A + M +++ + + + D DG + +E
Sbjct: 128 FQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEE 187
Query: 1559 YMAFM 1563
+ + +
Sbjct: 188 WRSLV 192
Score = 39.8 bits (93), Expect = 0.003
Identities = 14/95 (14%), Positives = 30/95 (31%), Gaps = 10/95 (10%)
Query: 1471 RMQHNLEQQIQARNQSGVSEDALKEFSMMFKHFDKD--KSGKLNQTEFKSCLRALGYDLP 1528
+ L + S ++ +FK G +N+ EF+ L
Sbjct: 25 KQSGGLGDPELLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTN---- 80
Query: 1529 MVEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFM 1563
+ + + DL D +G + +E+ +
Sbjct: 81 ----KKESLFADRVFDLFDTKHNGILGFEEFARAL 111
>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3
domain, protein binding; 2.01A {Homo sapiens} PDB:
2kt1_A
Length = 90
Score = 41.9 bits (98), Expect = 8e-05
Identities = 13/68 (19%), Positives = 25/68 (36%), Gaps = 17/68 (25%)
Query: 152 ALYDYTEKSPREVSMKKSDVLTLLNSNNKD---------------WWK--VEVNDRQGFV 194
ALY + + P ++ + DVL + + + W E ++G
Sbjct: 16 ALYPFRRERPEDLELLPGDVLVVSRAALQALGVAEGGERCPQSVGWMPGLNERTRQRGDF 75
Query: 195 PAAYVKKM 202
P YV+ +
Sbjct: 76 PGTYVEFL 83
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport,
ionic channel, membrane, PO potassium channel, potassium
transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Length = 229
Score = 44.9 bits (106), Expect = 9e-05
Identities = 18/82 (21%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
Query: 1487 GVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRAL-----GYDLPMVEEGQPDPEFEA 1541
G ++ L F +D +K G + + E ++A+ P+++E P E
Sbjct: 134 GTVQEKLN---WAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVET 190
Query: 1542 ILDLVDPNRDGHVSLQEYMAFM 1563
+D N+DG V++ E++
Sbjct: 191 FFQKMDKNKDGVVTIDEFIESC 212
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A
{Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B*
1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B
3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y
2otg_B* 2os8_B* 3pn7_B ...
Length = 156
Score = 43.3 bits (103), Expect = 1e-04
Identities = 13/74 (17%), Positives = 23/74 (31%), Gaps = 8/74 (10%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN 1549
D+ + F FD+ ++ KLN K L +G + E
Sbjct: 83 TDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMG-------DNFNKDEMRMTFKEAPVE 135
Query: 1550 RDGHVSLQEYMAFM 1563
G ++ A +
Sbjct: 136 -GGKFDYVKFTAMI 148
Score = 42.5 bits (101), Expect = 2e-04
Identities = 11/78 (14%), Positives = 28/78 (35%), Gaps = 11/78 (14%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
+ ++E F D D+ G +++ + K+ LG E + ++
Sbjct: 13 PQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKE----------LTAMLK- 61
Query: 1549 NRDGHVSLQEYMAFMISK 1566
G ++ +++ K
Sbjct: 62 EAPGPLNFTMFLSIFSDK 79
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative
splicing, coiled coil, cytoplasmic vesicle, endocytosis,
phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Length = 486
Score = 45.5 bits (106), Expect = 1e-04
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 129 EQAQSCRQQETPVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNN-KDWWKVEV 187
A + V ALYDY + E+S K D LT + + + W K +
Sbjct: 410 TDANGDSNPFDDDATSGTEVRVRALYDYEGQEHDELSFKAGDELTKMEDEDEQGWCKGRL 469
Query: 188 -NDRQGFVPAAYVKKME 203
N + G PA YV+ ++
Sbjct: 470 DNGQVGLYPANYVEAIQ 486
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer,
alternative splicing, apoptosis, cytoplasm, endoplasmic
reticulum, golgi apparatus; NMR {Mus musculus}
Length = 256
Score = 44.7 bits (105), Expect = 1e-04
Identities = 15/71 (21%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 1498 MMFKHFDKDKSGKLNQTEFKSCLRAL-----GYDLPMVEEGQPDPEFEAILDLVDPNRDG 1552
F +D +K G + + E + ++++ + P++ E P E +D N+DG
Sbjct: 169 WAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDG 228
Query: 1553 HVSLQEYMAFM 1563
V++ E++
Sbjct: 229 VVTIDEFLETC 239
Score = 34.6 bits (79), Expect = 0.19
Identities = 13/94 (13%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
Query: 1470 MRMQHNLEQQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPM 1529
++H E Q + Q+ ++ L+ FK ++ +G +++ FK
Sbjct: 70 STVRHQPEGLDQLQAQTKFTKKELQSLYRGFK--NECPTGLVDEDTFKLIYSQFF----- 122
Query: 1530 VEEGQPDPEFEAILDLVDPNRDGHVSLQEYMAFM 1563
+G + + D + +G + ++++ +
Sbjct: 123 -PQGDATTYAHFLFNAFDADGNGAIHFEDFVVGL 155
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein,
EF-hand, calcium ION, metal binding protein; HET: 1PE
P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Length = 190
Score = 43.7 bits (103), Expect = 1e-04
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Query: 1498 MMFKHFDKDKSGKLNQTEFKSCLRALG-----YDLPMVEEGQPDPEFEAILDLVDPNRDG 1552
FK +D D G + + E + A+ EE P+ + I ++D N DG
Sbjct: 103 WAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADG 162
Query: 1553 HVSLQEYMAFM 1563
++LQE+
Sbjct: 163 KLTLQEFQEGS 173
Score = 36.4 bits (84), Expect = 0.037
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
Query: 1494 KEFSMMFKHF-DKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDG 1552
KE +K F SG+L+ F+ + G P + ++ D N+DG
Sbjct: 25 KEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFF------PFGDPTKFATFVFNVFDENKDG 78
Query: 1553 HVSLQEYMAFM 1563
+ E++ +
Sbjct: 79 RIEFSEFIQAL 89
>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex,
DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich
sequence, cytoskeleton; 2.10A {Homo sapiens}
Length = 184
Score = 43.5 bits (102), Expect = 1e-04
Identities = 23/157 (14%), Positives = 60/157 (38%), Gaps = 10/157 (6%)
Query: 133 SCRQQETPVIDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVND--- 189
S P + +A+Y++ ++S++ DV+ + + DW++ +
Sbjct: 3 SGSSGMAPWRKADKERHGVAIYNFQGSGAPQLSLQIGDVVRIQETCG-DWYRGYLIKHKM 61
Query: 190 RQGFVPAAYVKKMEA--GLTASQQNLADVKEVKILETANDIQERREQVLNRYADFKSEA- 246
QG P +++ E + +N+ + E + E Y K E
Sbjct: 62 LQGIFPKSFIHIKEVTVEKRRNTENIIPAEIPLAQEVTTTLWEWGSIWKQLYVASKKERF 121
Query: 247 RSKREKLEDITVKEVKILE---TANDIQERREQVLNR 280
+ + D+ ++L ++++E +++V ++
Sbjct: 122 LQVQSMMYDLMEWRSQLLSGTLPKDELKELKQKVTSK 158
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein,
EF-finger, transport protein; 2.30A {Homo sapiens} SCOP:
a.39.1.5
Length = 224
Score = 44.2 bits (104), Expect = 1e-04
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Query: 1487 GVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRAL-----GYDLPMVEEGQPDPEFEA 1541
G + L+ F +D +K G +N+ E ++A+ Y P+++E P +
Sbjct: 121 GTVHEKLR---WTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDV 177
Query: 1542 ILDLVDPNRDGHVSLQEYMAFM 1563
+D N+DG V+L E++
Sbjct: 178 FFQKMDKNKDGIVTLDEFLESC 199
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding
protein; NMR {Homo sapiens} SCOP: a.39.1.7
Length = 103
Score = 41.5 bits (97), Expect = 2e-04
Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 9/77 (11%)
Query: 1500 FKHFDKDKSGKLNQTEFKSCLRAL---------GYDLPMVEEGQPDPEFEAILDLVDPNR 1550
F D + G L++ E ++ D E + E ++ VD N+
Sbjct: 26 FILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQ 85
Query: 1551 DGHVSLQEYMAFMISKE 1567
D V+L+E++A KE
Sbjct: 86 DRLVTLEEFLASTQRKE 102
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal
binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A
2wcf_A 2wce_A 1e8a_A 1gqm_A
Length = 95
Score = 40.9 bits (96), Expect = 2e-04
Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 1490 EDALKEFSMMFKHF--DKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPE-FEAILDLV 1546
E+ L+ +F + K L++ E K L +L + D + I +
Sbjct: 8 EEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTK---ELANTIKNIKDKAVIDEIFQGL 64
Query: 1547 DPNRDGHVSLQEYMAFM 1563
D N+D V QE+++ +
Sbjct: 65 DANQDEQVDFQEFISLV 81
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural
genomics, PSI-B protein structure initiative, NEW YORK
structural genomics consortium; 1.54A {Homo sapiens} PDB:
1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Length = 93
Score = 40.9 bits (96), Expect = 2e-04
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 1490 EDALKEFSMMFKHF--DKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDP-EFEAILDLV 1546
E AL F + + KLN++E K L +LP + D F+ ++ +
Sbjct: 6 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTR---ELPSFLGKRTDEAAFQKLMSNL 62
Query: 1547 DPNRDGHVSLQEYMAFM 1563
D NRD V QEY F+
Sbjct: 63 DSNRDNEVDFQEYCVFL 79
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific
guanylate cyclase activator; 2.40A {Bos taurus} SCOP:
a.39.1.5
Length = 193
Score = 42.9 bits (101), Expect = 2e-04
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Query: 1487 GVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALG-----YDLPMVEEGQPDPEFEA 1541
G E LK F +D D +G +++ E ++A+ +E P+ E
Sbjct: 95 GKLEQKLK---WAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEK 151
Query: 1542 ILDLVDPNRDGHVSLQEYMAFM 1563
I +D NRDG +SL+E++
Sbjct: 152 IFRQMDTNRDGKLSLEEFIRGA 173
Score = 42.5 bits (100), Expect = 4e-04
Identities = 16/81 (19%), Positives = 28/81 (34%), Gaps = 8/81 (9%)
Query: 1483 RNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAI 1542
+ +E ++E+ F SG L+ EFK G E +
Sbjct: 17 LESTDFTEHEIQEWYKGFL--RDCPSGHLSMEEFKKIYGNFF------PYGDASKFAEHV 68
Query: 1543 LDLVDPNRDGHVSLQEYMAFM 1563
D N DG + +E++ +
Sbjct: 69 FRTFDANGDGTIDFREFIIAL 89
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle,
myosin subfragment 2, heavy meromyosin, essential light
chain; 20.00A {Avicularia avicularia}
Length = 196
Score = 42.7 bits (101), Expect = 3e-04
Identities = 13/78 (16%), Positives = 24/78 (30%), Gaps = 8/78 (10%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN 1549
D F FD + GK + K L G E E + L +
Sbjct: 122 TDEEDVIVNAFNLFD-EGDGKCKEETLKRSLTTWG-------EKFSQDEVDQALSEAPID 173
Query: 1550 RDGHVSLQEYMAFMISKE 1567
+G + ++++ +
Sbjct: 174 GNGLIDIKKFAQILTKGA 191
Score = 42.7 bits (101), Expect = 3e-04
Identities = 13/78 (16%), Positives = 32/78 (41%), Gaps = 11/78 (14%)
Query: 1489 SEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDP 1548
++ ++EF F+ D+DK G +++ + ++ +LG E LD +
Sbjct: 52 TQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCT-----------EQELDSMVA 100
Query: 1549 NRDGHVSLQEYMAFMISK 1566
G ++ ++ +
Sbjct: 101 EAPGPINFTMFLTIFGDR 118
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding
protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Length = 190
Score = 42.5 bits (100), Expect = 4e-04
Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
Query: 1487 GVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRAL-----GYDLPMVEEGQPDPEFEA 1541
G D L F+ +D D +G ++ E + A+ +E P+
Sbjct: 95 GELNDKLI---WAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNK 151
Query: 1542 ILDLVDPNRDGHVSLQEYMAFM 1563
I +++D N+DG ++L+E+
Sbjct: 152 IFNMMDKNKDGQLTLEEFCEGS 173
Score = 36.7 bits (85), Expect = 0.024
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 1494 KEFSMMFKHFDK-DKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDG 1552
KE +K F K SG LN++EF+ + G P E + ++ D +++G
Sbjct: 25 KELQQWYKGFFKDCPSGHLNKSEFQKIYKQFF------PFGDPSAFAEYVFNVFDADKNG 78
Query: 1553 HVSLQEYMAFM 1563
++ +E++ +
Sbjct: 79 YIDFKEFICAL 89
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER,
golgi, transport, disulfide bond, endopla reticulum,
ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A
3lcp_C
Length = 143
Score = 40.7 bits (95), Expect = 6e-04
Identities = 22/129 (17%), Positives = 48/129 (37%), Gaps = 6/129 (4%)
Query: 1441 EEHLILDNRYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNQSGVSEDALKEFSM-M 1499
H+ + E + LD+ + Q ++ + ++ +E + +E +
Sbjct: 14 SGHIEGRHMLEEPAASFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHY 73
Query: 1500 FKHFDKDKSGKLNQTEFKSCLRAL-GYDLPMVEEGQPDPEFEAILDLV----DPNRDGHV 1554
FK D D + L+ E + + + + + E I+D V D N DG++
Sbjct: 74 FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYI 133
Query: 1555 SLQEYMAFM 1563
E+ +
Sbjct: 134 DYAEFAKSL 142
>2kt8_A Probable surface protein; SH3 family, structural genomics, PSI-2,
protein structure initiative, northeast structural
genomics consortium; NMR {Clostridium perfringens} PDB:
2kyb_A
Length = 76
Score = 38.8 bits (91), Expect = 8e-04
Identities = 8/48 (16%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 165 SMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEAGLTASQQN 212
S+ + +T++ ++K+E G+V Y+K ++ + +
Sbjct: 28 SLSGNTKVTIVGEEG-AFYKIEYKGSHGYVAKEYIKDIKDEVLEHHHH 74
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport
protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB:
2nz0_A 2i2r_E
Length = 183
Score = 41.3 bits (97), Expect = 8e-04
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 1485 QSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALG-----YDLPMVEEGQPDPEF 1539
G + L+ F +D +K G +N+ E ++A+ Y P+++E P
Sbjct: 86 LRGTVHEKLR---WTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHV 142
Query: 1540 EAILDLVDPNRDGHVSLQEYMAF 1562
+ +D N+DG V+L E++
Sbjct: 143 DVFFQKMDKNKDGIVTLDEFLES 165
Score = 35.2 bits (81), Expect = 0.087
Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
Query: 1494 KEFSMMFKHF-DKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDG 1552
+E ++++ F ++ SG +N+ FK G + + D + G
Sbjct: 18 RELQVLYRGFKNEXPSGVVNEETFKQIYAQFF------PHGDASTYAHYLFNAFDTTQTG 71
Query: 1553 HVSLQEYMAFM 1563
V ++++ +
Sbjct: 72 SVKFEDFVTAL 82
>2krs_A Probable enterotoxin; all beta, SH3, ENTD, CPF_0587, CPE0606,
structural genomics, PSI-2, protein structure
initiative; NMR {Clostridium perfringens}
Length = 74
Score = 38.4 bits (90), Expect = 8e-04
Identities = 6/48 (12%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 165 SMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEAGLTASQQN 212
+++ +D + ++ + W+++ N + G+ +Y+ + G +
Sbjct: 26 TLRNNDKVEIIKEVD-GWYEIRFNGKVGYASKSYITIVNEGSLEHHHH 72
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo
sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Length = 183
Score = 40.9 bits (96), Expect = 0.001
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 1499 MFKHFDKDKSGKLNQTEFKSCLRAL--GYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSL 1556
F+ FD D G LN+ + + L + + + + IL+ D +RDG ++L
Sbjct: 103 AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINL 162
Query: 1557 QEYMAFM 1563
E+ +
Sbjct: 163 SEFQHVI 169
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal
binding protein; NMR {Saccharomyces cerevisiae} SCOP:
a.39.1.5 PDB: 2ju0_A
Length = 190
Score = 41.0 bits (96), Expect = 0.001
Identities = 15/72 (20%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Query: 1497 SMMFKHFDKDKSGKLNQTEFKSCLRALG-----YDLPMVEEGQPDPEFEAILDLVDPNRD 1551
S F+ +D + G + E + + ++ +E P+ + I L+D N D
Sbjct: 102 SWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNED 161
Query: 1552 GHVSLQEYMAFM 1563
G+++L E+
Sbjct: 162 GYITLDEFREGS 173
Score = 37.5 bits (87), Expect = 0.015
Identities = 12/71 (16%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
Query: 1494 KEFSMMFKHFDK-DKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDG 1552
+E K F + SG+L + +F + G P+ + + D + +G
Sbjct: 25 REIQQWHKGFLRDCPSGQLAREDFVKIYKQFF------PFGSPEDFANHLFTVFDKDNNG 78
Query: 1553 HVSLQEYMAFM 1563
+ +E++ +
Sbjct: 79 FIHFEEFITVL 89
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding
protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Length = 113
Score = 39.5 bits (92), Expect = 0.001
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 1490 EDALKEFSMMFKHF--DKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDP-EFEAILDLV 1546
E AL F + + KLN++E K L +LP + D F+ ++ +
Sbjct: 18 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTR---ELPSFLGKRTDEAAFQKLMSNL 74
Query: 1547 DPNRDGHVSLQEYMAFM 1563
D NRD V QEY F+
Sbjct: 75 DSNRDNEVDFQEYCVFL 91
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15;
EH domain, EF-hand, solution structure, S100 protein; NMR
{Mus musculus} SCOP: a.39.1.6
Length = 99
Score = 39.0 bits (91), Expect = 0.001
Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 9/68 (13%)
Query: 1496 FSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVS 1555
+ ++ + +G++ + + L+ G PD I DL D + G +S
Sbjct: 13 YEKYYRQVEAGNTGRVLALDAAAFLKK---------SGLPDLILGKIWDLADTDGKGVLS 63
Query: 1556 LQEYMAFM 1563
QE+ +
Sbjct: 64 KQEFFVAL 71
Score = 29.4 bits (66), Expect = 2.2
Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 8/58 (13%)
Query: 1485 QSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLR----AL-GYDLPMVEEGQPDP 1537
+SG+ + L + ++ D D G L++ EF LR A G ++ + P
Sbjct: 39 KSGLPDLILGK---IWDLADTDGKGVLSKQEFFVALRLVACAQNGLEVSLSSLSLAVP 93
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein;
1.45A {Homo sapiens} PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Length = 101
Score = 39.1 bits (91), Expect = 0.001
Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 6/77 (7%)
Query: 1490 EDALKEFSMMF-KHFDKD-KSGKLNQTEFKSCLRALGYDLPMVEEGQPDP-EFEAILDLV 1546
E A+ F ++ + KL Q E K L+ +L + ++ + ++
Sbjct: 6 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQK---ELATWTPTEFRECDYNKFMSVL 62
Query: 1547 DPNRDGHVSLQEYMAFM 1563
D N+D V EY+ +
Sbjct: 63 DTNKDCEVDFVEYVRSL 79
>2kq8_A Cell WALL hydrolase; GFT protein structure, NESG, PSI, SH3 domain,
structural genomics, protein structure initiative; NMR
{Bacillus thuringiensis serovarkonkukian}
Length = 70
Score = 38.0 bits (89), Expect = 0.001
Identities = 8/39 (20%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 165 SMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKME 203
++ + + +++ N+ W K+ N + G++ Y+ K+E
Sbjct: 27 ALPQGQKVQVISENS-GWSKINYNGQTGYIGTRYLSKLE 64
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene
family, nuclear protein, phosphorylation, disease
mutation, polymorphism; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.211.1.1 PDB: 4a63_B
Length = 239
Score = 41.4 bits (98), Expect = 0.001
Identities = 18/61 (29%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 142 IDVTGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKD---WWKVEVNDRQGFVPAAY 198
+ + K + AL+DY ++ E+ MK+ D +T+++ ++D WW +ND++G+VP
Sbjct: 165 MGIMNKGVIYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWARLNDKEGYVPRNL 224
Query: 199 V 199
+
Sbjct: 225 L 225
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type
four-helix bundle, metal binding protein; NMR {Rattus
norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A
2l0p_A 2jpt_A
Length = 93
Score = 38.6 bits (90), Expect = 0.001
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 1490 EDALKEFSMMFKHF--DKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPE-FEAILDLV 1546
E A++ +F + KL++ E K L+ +L + Q D + + I+ +
Sbjct: 5 ETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQT---ELSSFLDVQKDADAVDKIMKEL 61
Query: 1547 DPNRDGHVSLQEYMAFM 1563
D N DG V QE++ +
Sbjct: 62 DENGDGEVDFQEFVVLV 78
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100
proteins, EF-; 1.94A {Homo sapiens}
Length = 104
Score = 38.7 bits (90), Expect = 0.001
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 1490 EDALKEFSMMFKHF--DKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDP-EFEAILDLV 1546
E AL F + + KLN++E K L +LP + D F+ ++ +
Sbjct: 9 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTR---ELPSWLGKRTDEAAFQKLMSNL 65
Query: 1547 DPNRDGHVSLQEYMAFM 1563
D NRD V QEY F+
Sbjct: 66 DSNRDNEVDFQEYCVFL 82
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein
bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A
3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A
3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A*
3lk1_A* 3lk0_A* 1b4c_A ...
Length = 92
Score = 38.2 bits (89), Expect = 0.002
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 1490 EDALKEFSMMFKHF--DKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPE-FEAILDLV 1546
E A+ +F + + KL ++E K + +L E + E + +++ +
Sbjct: 5 EKAVVALIDVFHQYSGREGDKHKLKKSELKELINN---ELSHFLEEIKEQEVVDKVMETL 61
Query: 1547 DPNRDGHVSLQEYMAFM 1563
D N DG QE+MAF+
Sbjct: 62 DSNGDGECDFQEFMAFV 78
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP:
a.39.1.2 PDB: 1ozo_A
Length = 95
Score = 38.3 bits (89), Expect = 0.002
Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 1490 EDALKEFSMMFKHF--DKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPE-FEAILDLV 1546
E A+ +F + + + L + E K + +LP + D + + +L +
Sbjct: 5 ETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEK---ELPGFLQSGKDKDAVDKLLKDL 61
Query: 1547 DPNRDGHVSLQEYMAFM 1563
D N D V E++ F+
Sbjct: 62 DANGDAQVDFSEFIVFV 78
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP:
a.39.1.1
Length = 78
Score = 37.7 bits (88), Expect = 0.002
Identities = 15/76 (19%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 1490 EDALKEFSMMFKHFDKDK--SGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVD 1547
+ + E +F+ + + +L++ E K ++A P + +G + + +D
Sbjct: 3 QKSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAE---FPSLLKGPR--TLDDLFQELD 57
Query: 1548 PNRDGHVSLQEYMAFM 1563
N DG VS +E+ +
Sbjct: 58 KNGDGEVSFEEFQVLV 73
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100
family, EF-hand protein, complex (ligand/annexin), ligand
of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB:
1nsh_A
Length = 99
Score = 37.9 bits (88), Expect = 0.002
Identities = 15/77 (19%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 1490 EDALKEFSMMFKHF--DKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPE-FEAILDLV 1546
E ++ +F+ + K+++TEF + +L + Q DP + ++ +
Sbjct: 9 ERCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNT---ELAAFTQNQKDPGVLDRMMKKL 65
Query: 1547 DPNRDGHVSLQEYMAFM 1563
D + DG + QE++ +
Sbjct: 66 DLDSDGQLDFQEFLNLI 82
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein
STR and functional analyses, riken structural
genomics/proteomi initiative; 2.20A {Homo sapiens} PDB:
2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A
2het_A
Length = 207
Score = 40.0 bits (93), Expect = 0.002
Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 7/73 (9%)
Query: 1498 MMFKHFDKDKSGKLNQTEFKSCLRALGYDLP-------MVEEGQPDPEFEAILDLVDPNR 1550
F +D D +G +++ E + A+ + +E P+ E I N
Sbjct: 111 WAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKND 170
Query: 1551 DGHVSLQEYMAFM 1563
D ++ +E++
Sbjct: 171 DDKLTEKEFIEGT 183
Score = 38.8 bits (90), Expect = 0.006
Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
Query: 1494 KEFSMMFKHF-DKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDG 1552
+E ++ F +G++ Q +F+S + P + + D N DG
Sbjct: 33 EELCSWYQSFLKDCPTGRITQQQFQSIYAKFF------PDTDPKAYAQHVFRSFDSNLDG 86
Query: 1553 HVSLQEYMAFM 1563
+ +EY+ +
Sbjct: 87 TLDFKEYVIAL 97
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH
domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A
1f8h_A 1ff1_A
Length = 106
Score = 37.8 bits (88), Expect = 0.003
Identities = 14/84 (16%), Positives = 29/84 (34%), Gaps = 14/84 (16%)
Query: 1484 NQSG----VSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEF 1539
N+ G V + ++ +F +G L+ + K ++ P
Sbjct: 1 NRWGSPWAVKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPV---------LLNSKLPVDIL 50
Query: 1540 EAILDLVDPNRDGHVSLQEYMAFM 1563
+ +L D + DG + E+ M
Sbjct: 51 GRVWELSDIDHDGMLDRDEFAVAM 74
Score = 28.2 bits (63), Expect = 7.6
Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 8/51 (15%)
Query: 1485 QSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRAL-----GYDLPMV 1530
S + D L +++ D D G L++ EF + + +PM
Sbjct: 42 NSKLPVDILGR---VWELSDIDHDGMLDRDEFAVAMFLVYCALEKEPVPMS 89
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor
supressor, CAL binding protein; 1.30A {Homo sapiens} PDB:
2rgi_A 4duq_A
Length = 98
Score = 37.5 bits (87), Expect = 0.004
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 1490 EDALKEFSMMFKHF--DKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPE-FEAILDLV 1546
E AL F + + KL++ E K L +LP + D E + ++ +
Sbjct: 7 EQALAVLVTTFHKYSSQEGDKFKLSKGEMKELLHK---ELPSFVGEKVDEEGLKKLMGSL 63
Query: 1547 DPNRDGHVSLQEYMAFM 1563
D N D V QEY F+
Sbjct: 64 DENSDQQVDFQEYAVFL 80
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein,
EF-hand, calcium regulation, oligomer neuronal
development, spine2; 2.03A {Danio rerio}
Length = 99
Score = 37.5 bits (87), Expect = 0.004
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 1490 EDALKEFSMMFKHF--DKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPE-FEAILDLV 1546
E A+ +F ++ + KL++ E K L A +L Q DP E I++ +
Sbjct: 6 EGAMDALITVFHNYSGSEGDKYKLSKGELKELLNA---ELTDFLMSQKDPMLVEKIMNDL 62
Query: 1547 DPNRDGHVSLQEYMAFM 1563
D N+D V E++ +
Sbjct: 63 DSNKDNEVDFNEFVVLV 79
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand
calcium binding proteins, S100 proteins, protein
dynamics, binding protein; 2.10A {Homo sapiens} PDB:
2l0u_A 2l0v_A 2l50_A 2l51_A
Length = 100
Score = 37.5 bits (87), Expect = 0.004
Identities = 14/78 (17%), Positives = 32/78 (41%), Gaps = 7/78 (8%)
Query: 1490 EDALKEFSMMFKHF---DKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPE-FEAILDL 1545
E A+ F + K++++ F+ L+ +L + + + + ++
Sbjct: 7 EKAVIVLVENFYKYVSKYSLVKNKISKSSFREMLQK---ELNHMLSDTGNRKAADKLIQN 63
Query: 1546 VDPNRDGHVSLQEYMAFM 1563
+D N DG +S EY +
Sbjct: 64 LDANHDGRISFDEYWTLI 81
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+)
requirement, hydrolase chimera; 2.80A {Rattus norvegicus}
SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Length = 900
Score = 40.9 bits (95), Expect = 0.004
Identities = 11/78 (14%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 1491 DALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNR 1550
+ +K++ ++K F+ D+SG + E A G+ L + +++ +
Sbjct: 801 NNIKKWQGIYKRFETDRSGTIGSNELPGAFEAAGFHL--------NQHIYSMIIRRYSDE 852
Query: 1551 DGHVSLQEYMAFMISKET 1568
G++ +++ ++ +
Sbjct: 853 TGNMDFDNFISCLVRLDA 870
Score = 40.1 bits (93), Expect = 0.007
Identities = 12/76 (15%), Positives = 32/76 (42%), Gaps = 8/76 (10%)
Query: 1493 LKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDG 1552
++ + +F+ FD DKSG ++ E + + A G+ L + ++ + +
Sbjct: 606 IRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKL--------PCQLHQVIVARFADDEL 657
Query: 1553 HVSLQEYMAFMISKET 1568
+ ++ ++ E
Sbjct: 658 IIDFDNFVRCLVRLEI 673
Score = 32.8 bits (74), Expect = 1.2
Identities = 26/164 (15%), Positives = 53/164 (32%), Gaps = 13/164 (7%)
Query: 1395 LTETRTSMMEGTGSLEQQLEAIKRKAAEVRSRRSDLKKIEDLGAILEEHLILDNRYTEHS 1454
L ++ T ++ + + R +E ++ +L E+ L +
Sbjct: 478 LPPGEYIVVPSTFEPNKEGDFLLRFFSEKKAGTQELDDQIQANLPDEKVLSEEEIDDNFK 537
Query: 1455 TVGLAQQWDQLDQLGMRMQHNLEQQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQT 1514
T+ D ++ +Q L + I + +L+ M D+D +GKL
Sbjct: 538 TLFSKLAGDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLV 597
Query: 1515 EFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQE 1558
EF + + I D ++ G +S E
Sbjct: 598 EFNILWNRIR-------------NYLTIFRKFDLDKSGSMSAYE 628
Score = 30.1 bits (67), Expect = 7.5
Identities = 13/61 (21%), Positives = 21/61 (34%), Gaps = 13/61 (21%)
Query: 1498 MMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQ 1557
M D D +GKL EFK + +++ I + +R G +
Sbjct: 778 SMVAVMDSDTTGKLGFEEFKYLWNNI-------------KKWQGIYKRFETDRSGTIGSN 824
Query: 1558 E 1558
E
Sbjct: 825 E 825
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR
{Homo sapiens} PDB: 2l4i_A 2lm5_A
Length = 214
Score = 39.1 bits (91), Expect = 0.005
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 1499 MFKHFDKDKSGKLNQTEFKSCLRAL--GYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSL 1556
F+ FD D G LN+ + + L + + + + IL+ D +RDG ++L
Sbjct: 134 AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINL 193
Query: 1557 QEYMAFM 1563
E+ +
Sbjct: 194 SEFQHVI 200
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2,
protein structure initiative, northeast structural
genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Length = 121
Score = 37.1 bits (86), Expect = 0.007
Identities = 14/76 (18%), Positives = 25/76 (32%), Gaps = 10/76 (13%)
Query: 1488 VSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVD 1547
++ + + F SG + + ++ + G P P I L D
Sbjct: 27 ITVEERAKHDQQFHSLK-PISGFITGDQARN---------FFFQSGLPQPVLAQIWALAD 76
Query: 1548 PNRDGHVSLQEYMAFM 1563
N DG + E+ M
Sbjct: 77 MNNDGRMDQVEFSIAM 92
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100
protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB:
2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Length = 100
Score = 36.7 bits (85), Expect = 0.007
Identities = 8/74 (10%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 1490 EDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPN 1549
E ++ MF + + K+++ + ++ + + + + + D N
Sbjct: 6 ERSIIGMIDMFHKY-TRRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKN 64
Query: 1550 RDGHVSLQEYMAFM 1563
D + E+++ +
Sbjct: 65 EDKKIDFSEFLSLL 78
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell
membrane, hydrolase, MEMB protease, thiol protease,
phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A
1df0_A 1u5i_A 1kfu_L 1kfx_L
Length = 714
Score = 39.8 bits (92), Expect = 0.008
Identities = 9/72 (12%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
Query: 1493 LKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDG 1552
++++ +++ D D+SG +N E + L G+ L + ++ + +
Sbjct: 604 IQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKL--------PCQLHQVIVARFADDEL 655
Query: 1553 HVSLQEYMAFMI 1564
+ ++ ++
Sbjct: 656 IIDFDNFVRCLV 667
Score = 32.9 bits (74), Expect = 1.2
Identities = 17/87 (19%), Positives = 33/87 (37%), Gaps = 13/87 (14%)
Query: 1472 MQHNLEQQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVE 1531
+Q L + + R +++ +M D+D SGKL EF +
Sbjct: 553 LQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKIQ------- 605
Query: 1532 EGQPDPEFEAILDLVDPNRDGHVSLQE 1558
+++ I +D +R G ++ E
Sbjct: 606 ------KYQKIYREIDVDRSGTMNSYE 626
>1mv3_A MYC box dependent interacting protein 1; tumor suppressor,
endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP:
b.34.2.1
Length = 213
Score = 38.5 bits (88), Expect = 0.009
Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 15/68 (22%)
Query: 150 VIALYDYTEKSPREVSMKKSDVLTLLNSNNKD-----WWK----------VEVNDRQGFV 194
V A +DYT E+ +K DV+ ++ N + W ++ +G
Sbjct: 145 VQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKKLEKCRGVF 204
Query: 195 PAAYVKKM 202
P + +++
Sbjct: 205 PENFTERV 212
>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain,
peptide complex, alternative splicing, disease mutation,
HOST-virus interaction, phosphoprotein, polymorphism;
1.70A {Homo sapiens} PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A
1pks_A 1pkt_A
Length = 83
Score = 35.1 bits (80), Expect = 0.017
Identities = 14/69 (20%), Positives = 25/69 (36%), Gaps = 17/69 (24%)
Query: 152 ALYDYTEKSPREVSMKKSDVLTLLNSNNKD---------------WWK--VEVNDRQGFV 194
ALYDY ++ ++ + D+LT+ + W E +G
Sbjct: 10 ALYDYKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERGDF 69
Query: 195 PAAYVKKME 203
P YV+ +
Sbjct: 70 PGTYVEYIG 78
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A
{Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB:
1eg4_A
Length = 261
Score = 37.7 bits (87), Expect = 0.019
Identities = 22/197 (11%), Positives = 62/197 (31%), Gaps = 28/197 (14%)
Query: 1374 QDENDALRKEFAKHANAFHQWLTETRTSMMEGTGSLEQQLEAIKRKAAEVRSRRSDLK-- 1431
+ + + H W T + + L + R A ++R + L
Sbjct: 18 RAISPNKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLD 77
Query: 1432 --KIEDLGAILEEHLILDNRYTEHSTVGLAQQWDQLDQLGMRMQ-HNLEQQIQARNQSGV 1488
+ L++H L Q +D L + + +++ + + V
Sbjct: 78 LLSLSAACDALDQH-------------NLKQNDQPMDILQIINCLTTIYDRLEQEHNNLV 124
Query: 1489 SEDALKE--FSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLV 1546
+ + + + +D ++G++ FK+ + +L + + ++ + V
Sbjct: 125 NVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIISLC-------KAHLEDKYRYLFKQV 177
Query: 1547 DPNRDGHVSLQEYMAFM 1563
+ G + +
Sbjct: 178 A-SSTGFCDQRRLGLLL 193
Score = 29.7 bits (66), Expect = 6.6
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 6/71 (8%)
Query: 1501 KHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEA------ILDLVDPNRDGHV 1554
+H K ++ + +CL + L + +L++ D R G +
Sbjct: 90 QHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRI 149
Query: 1555 SLQEYMAFMIS 1565
+ + +IS
Sbjct: 150 RVLSFKTGIIS 160
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium,
polymorphism, structural genomics, spine2, structural
proteomics in europe, spine; NMR {Homo sapiens} PDB:
2kay_A
Length = 92
Score = 35.1 bits (81), Expect = 0.022
Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 9/77 (11%)
Query: 1490 EDALKEFSMMFKHF--DKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEF-EAILDLV 1546
E AL F + + L++ E K + +L G+ + ++ +
Sbjct: 6 EKALTTMVTTFHKYSGREGSKLTLSRKELK---ELIKKELC---LGEMKESSIDDLMKSL 59
Query: 1547 DPNRDGHVSLQEYMAFM 1563
D N D + +EY F+
Sbjct: 60 DKNSDQEIDFKEYSVFL 76
>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein,
anti-adhesive protein, C binding, site-directed
mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP:
a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*
Length = 229
Score = 37.2 bits (85), Expect = 0.025
Identities = 15/79 (18%), Positives = 27/79 (34%), Gaps = 11/79 (13%)
Query: 1499 MFKHFDKDKS-GKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQ 1557
F D+ G L+ TE L L L + + D + D +++L
Sbjct: 160 QFGQLDQHPIDGYLSHTE----LAPLRAPL-----IPMEHCTTRFFETCDLDNDKYIALD 210
Query: 1558 E-YMAFMISKETRQNSSLV 1575
E F I ++ ++
Sbjct: 211 EWAGCFGIKQKDIDKDLVI 229
Score = 30.7 bits (68), Expect = 3.4
Identities = 21/170 (12%), Positives = 41/170 (24%), Gaps = 10/170 (5%)
Query: 1366 ELAKEATRQDENDALRKEFAKHANAFHQWLTETRTSMMEGTGSLEQQLEAIKRKAAEVRS 1425
+ K + + + E + L+ + E
Sbjct: 58 HFFATKCTLEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFPLRMRDWLKNVLVTLYERDE 117
Query: 1426 RRSDLKKIEDLG-------AILEEHLILDNRYTEHSTVGLAQQWDQLDQLGMRMQHNLEQ 1478
+ L + + L E + + Q+ QLDQ + + +
Sbjct: 118 DNNLLTEKQKLRVKKIHENEKRLEAGDHPEKNYNMYIFPVHWQFGQLDQHPIDGYLSHTE 177
Query: 1479 QIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLP 1528
R E F F+ D D + E+ C D+
Sbjct: 178 LAPLRAPLIPMEHCTTRF---FETCDLDNDKYIALDEWAGCFGIKQKDID 224
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free,
signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP:
a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A
2cnp_A 2jtt_A
Length = 90
Score = 34.7 bits (80), Expect = 0.026
Identities = 16/76 (21%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 1490 EDALKEFSMMFKHF--DKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVD 1547
+ A+ +F + + L++ E K ++ +L + + Q E +++ +D
Sbjct: 6 DQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQK---ELTIGSKLQDA-EIARLMEDLD 61
Query: 1548 PNRDGHVSLQEYMAFM 1563
N+D V+ QEY+ F+
Sbjct: 62 RNKDQEVNFQEYVTFL 77
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1;
phosphoric diester hydrolase, hydrolase, lipid
degradation, transducer; HET: I3P; 2.30A {Rattus
norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A
1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A
1qat_A
Length = 624
Score = 38.0 bits (87), Expect = 0.027
Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 7/64 (10%)
Query: 1499 MFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQE 1558
+ DK+K K+N E K L+ L + D I D ++ + +E
Sbjct: 16 CLRKADKNKDNKMNFKELKDFLKELNIQV-------DDGYARKIFRECDHSQTDSLEDEE 68
Query: 1559 YMAF 1562
F
Sbjct: 69 IETF 72
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein;
HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB:
1irj_A*
Length = 113
Score = 35.3 bits (81), Expect = 0.029
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Query: 1490 EDALKEFSMMFKHF--DKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVD 1547
E ++ F + LNQ EFK +R + E E I++ +D
Sbjct: 8 ERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEK-VIEHIMEDLD 66
Query: 1548 PNRDGHVSLQEYMAFM 1563
N D +S +E++ M
Sbjct: 67 TNADKQLSFEEFIMLM 82
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo
sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Length = 139
Score = 34.9 bits (80), Expect = 0.061
Identities = 12/76 (15%), Positives = 23/76 (30%), Gaps = 10/76 (13%)
Query: 1488 VSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVD 1547
V + +F +GK+ K + P+ I L D
Sbjct: 45 VVGKDKPTYDEIFYTLS-PVNGKITGANAKKEMVKSK---------LPNTVLGKIWKLAD 94
Query: 1548 PNRDGHVSLQEYMAFM 1563
++DG + +E+
Sbjct: 95 VDKDGLLDDEEFALAN 110
>1wfw_A Kalirin-9A; SH3 domain, neuron-specific GDP/GTP exchange factor,
structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Mus musculus}
SCOP: b.34.2.1
Length = 74
Score = 32.9 bits (74), Expect = 0.085
Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
Query: 145 TGKECVIALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKV--EVNDR----QGFVPA 196
+ + + DY E+ + + +V+ +L N ++ V +D +G+VP
Sbjct: 5 SSGSTMTVIKDYYALKENEICVSQGEVVQVLAVNQQNMCLVYQPASDHSPAAEGWVPG 62
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein;
HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A
Length = 93
Score = 32.1 bits (73), Expect = 0.24
Identities = 13/76 (17%), Positives = 25/76 (32%), Gaps = 8/76 (10%)
Query: 1490 EDALKEFSMMFKHF--DKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVD 1547
E AL ++ + K + + + K L + +D
Sbjct: 6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIR------KKGADVWFKELD 59
Query: 1548 PNRDGHVSLQEYMAFM 1563
N DG V+ QE++ +
Sbjct: 60 INTDGAVNFQEFLILV 75
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7
linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 34.6 bits (80), Expect = 0.24
Identities = 12/66 (18%), Positives = 18/66 (27%), Gaps = 13/66 (19%)
Query: 1500 FKHFDKDKSGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVDPNRDGHVSLQEY 1559
H D+S + L G P ++ V RDG +
Sbjct: 388 HIHLMGDESACIAYIRITQYLD---------AGGIPR-TAQSEETRVWHRRDGKW---QI 434
Query: 1560 MAFMIS 1565
+ F S
Sbjct: 435 VHFHRS 440
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp
contractIle protein-transport protein complex; 24.00A
{Gallus gallus}
Length = 1080
Score = 34.3 bits (79), Expect = 0.36
Identities = 27/256 (10%), Positives = 78/256 (30%), Gaps = 8/256 (3%)
Query: 250 REKLEDITVKEVKILETANDIQERREQVLNRYADFKSEARSKREKLEDSRRFQYFKRDAD 309
R++ + + + + R + + + + +
Sbjct: 832 RKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIV 891
Query: 310 ELESWIYEKL-QAASDESYKETTNLQAKIQKHQAFEAEVAAHSNAIVVLDNTGNDFYRDC 368
L+ + + + E +++ + H E ++ I +
Sbjct: 892 YLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKM 951
Query: 369 EQAENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAA 428
E S E++ S + + ++ ++ + + +E+I L+ Q
Sbjct: 952 NNLEITYSTET-----EKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTE 1006
Query: 429 DHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIAEKLQLA 488
+ D + + LKE ++ E ++ A E+ + +KL
Sbjct: 1007 KKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELN--RRIHDQAKEITETMEKKLVEE 1064
Query: 489 TEESYKDPANIQSKHQ 504
T++ D + + ++Q
Sbjct: 1065 TKQLELDLNDERLRYQ 1080
Score = 33.2 bits (76), Expect = 0.98
Identities = 27/222 (12%), Positives = 77/222 (34%), Gaps = 18/222 (8%)
Query: 517 ADRIQSVLAMGQNLIDKRQCVGSEEAVQARLASIADQWEFLTQKTTEKSL-KLKEANKQR 575
+ IQ + + + + + +Q + + E K +S+ + K+ +
Sbjct: 867 SIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGL 926
Query: 576 TYIAAVKDLPYFSKKDCEQAENWMSAREAFLNA---------EEVDSKTDNVEALIKKHE 626
+ L ++ ++ + +N E++ S + + ++ +
Sbjct: 927 E--NKIMQL----QRKIDEQNKEYKSLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAK 980
Query: 627 DFDKAINAHEEKIGALQTLADQLIAADHYAAKPIDDKRKQVLDRWRLLKEALIEKRSRLG 686
+ + + +E+I L+ Q + D + + LKE ++
Sbjct: 981 NATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKE 1040
Query: 687 ESQTLQQFSRDADEMENWIAEKLQLATEESYKDPANIQSKHQ 728
E ++ A E+ + +KL T++ D + + ++Q
Sbjct: 1041 ELN--RRIHDQAKEITETMEKKLVEETKQLELDLNDERLRYQ 1080
Score = 32.0 bits (73), Expect = 2.3
Identities = 23/139 (16%), Positives = 51/139 (36%), Gaps = 7/139 (5%)
Query: 201 KMEAGLTASQQNLADVKEVKILETANDIQERREQVLNRYADFKSEARSKREKLEDITVKE 260
K+EA + L E KI++ +Q + ++ Y + + T K
Sbjct: 910 KIEARSVERYKKLHIGLENKIMQ----LQRKIDEQNKEYKSLLEKMNNLEITYSTETEKL 965
Query: 261 VKILETANDIQERREQVLNRYADFKSEARSKREKLEDSRRFQYFKRDADELESWIYEKLQ 320
+E +E + NR + E R++L ++ K+ +E + +
Sbjct: 966 RSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQT---EKKTIEEWADKYKHETE 1022
Query: 321 AASDESYKETTNLQAKIQK 339
E ++ T L+ + ++
Sbjct: 1023 QLVSELKEQNTLLKTEKEE 1041
Score = 31.6 bits (72), Expect = 2.6
Identities = 23/158 (14%), Positives = 58/158 (36%), Gaps = 6/158 (3%)
Query: 869 DASSIQEKRQSINERYE-RIKNLAAHRQARLNEANTLHQFFRDIADEESWIKEKKLLVGS 927
+ E+ + ++ E +I L + E +L + ++ E ++ E + L
Sbjct: 911 IEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNNL--EITYSTETEKLRSD 968
Query: 928 -DDYGRDLTGVQNLKKKHKRLEAELASHQPAIQNVQETGEKLMDVSNLGVPEIEQRLKLL 986
+ +N + L+ E+A + + Q + + + ++ E EQ + L
Sbjct: 969 VERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSEL 1028
Query: 987 NQAWSELKQLAANRGQKLDESLT--YQHFLAKVEEEEA 1022
+ + LK +++ + + K+ EE
Sbjct: 1029 KEQNTLLKTEKEELNRRIHDQAKEITETMEKKLVEETK 1066
Score = 31.2 bits (71), Expect = 3.7
Identities = 18/100 (18%), Positives = 36/100 (36%), Gaps = 5/100 (5%)
Query: 1346 MEALEDTWRNLQKIIKERDIELAKEATRQDENDALRKEFAKHANAFHQWLTETRTSMMEG 1405
E L L+ +E + + Q+E LRKE + + E
Sbjct: 962 TEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKT-IEEWADKYKH- 1019
Query: 1406 TGSLEQQLEAIKRKAAEVRSRRSDLK-KIEDLGAILEEHL 1444
EQ + +K + +++ + +L +I D + E +
Sbjct: 1020 --ETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEITETM 1057
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 33.0 bits (74), Expect = 0.36
Identities = 10/32 (31%), Positives = 13/32 (40%), Gaps = 10/32 (31%)
Query: 938 QNLKKKHKRLEAELASHQP------AIQNVQE 963
Q LKK L+A L + AI+ E
Sbjct: 20 QALKK----LQASLKLYADDSAPALAIKATME 47
Score = 30.3 bits (67), Expect = 2.8
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 4/31 (12%)
Query: 60 SVQNLQKKHALLEADVASHLDRIESVKAATE 90
+++ LQ L D A L ++KA E
Sbjct: 21 ALKKLQASLKLYADDSAPAL----AIKATME 47
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein;
2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A
2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Length = 106
Score = 31.3 bits (71), Expect = 0.55
Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 7/76 (9%)
Query: 1490 EDALKEFSMMFKHFDKDK--SGKLNQTEFKSCLRALGYDLPMVEEGQPDPEFEAILDLVD 1547
E++++ F F + + L+ EFK + LP + + + + +D
Sbjct: 18 EESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQ---QLPHLLKDVGS--LDEKMKSLD 72
Query: 1548 PNRDGHVSLQEYMAFM 1563
N+D + EY +
Sbjct: 73 VNQDSELKFNEYWRLI 88
>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC,
cell junction, cell membrane, membrane, SH3 domain;
2.80A {Homo sapiens}
Length = 308
Score = 31.7 bits (71), Expect = 1.7
Identities = 12/103 (11%), Positives = 33/103 (32%), Gaps = 2/103 (1%)
Query: 152 ALYDYTEKSPREVSMKKSDVLTLLNSNNKDWWKVEVNDR--QGFVPAAYVKKMEAGLTAS 209
++ P + + DV +L++ + + +++ E G+ +
Sbjct: 9 THFELEPSPPSGLGFTRGDVFHVLDTLHPGPGQSHARGGHWLAVRMGRDLREQERGIIPN 68
Query: 210 QQNLADVKEVKILETANDIQERREQVLNRYADFKSEARSKREK 252
Q + ++ + A + N A+F +R
Sbjct: 69 QSRAEQLASLEAAQRAVGVGPGSSAGSNARAEFWRLRGLRRGA 111
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane
protein, endocytosis; HET: ANP; 3.10A {Mus musculus}
Length = 550
Score = 32.1 bits (72), Expect = 1.8
Identities = 30/212 (14%), Positives = 61/212 (28%), Gaps = 12/212 (5%)
Query: 1354 RNLQKIIKERDIELAKEATRQDENDALRKEFAKHANAFHQWLTETRTSMMEGTGSLEQQL 1413
+ + KE KE ++ L FAK H + +
Sbjct: 316 YIISYLKKEMPTVFGKENKKKQLILKLPVIFAKIQLEHHISPGDFPDCQKMQELLMAHDF 375
Query: 1414 EAIKRKAAEVRSRRSDL--KKIEDLGAILEEHLILDNRYTEHSTVGLAQQWDQLDQLGMR 1471
++ D+ + I L +L + + + + G
Sbjct: 376 TKFHSLKPKLLEALDDMLAQDIAKLMPLLRQEELESVEAGVAGGAFEGTRMGPFVERGPD 435
Query: 1472 MQHNLEQQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGYDLPMVE 1531
++ + V ++ +F + GKL+ ++ K+ MV
Sbjct: 436 EAIEDGEEGSEDDAEWVVTKDKSKYDEIFYNLA-PADGKLSGSKAKT---------WMVG 485
Query: 1532 EGQPDPEFEAILDLVDPNRDGHVSLQEYMAFM 1563
P+ I L D +RDG + +E+
Sbjct: 486 TKLPNSVLGRIWKLSDVDRDGMLDDEEFALAS 517
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding,
nucleotide-binding, phosphorylation, acetylation,
alternative splicing, coiled coil; HET: GDP GTP; 4.00A
{Homo sapiens}
Length = 427
Score = 31.6 bits (71), Expect = 2.0
Identities = 17/95 (17%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Query: 200 KKMEAGLTASQQNLADVKEVKILETANDIQERREQVLNRYADFKSEARSKREKLEDITVK 259
+K E + KE ++ E ++ E+ +++ + D K + K++ L+D
Sbjct: 336 QKKEEEMRQMFVQRVKEKEAELKEAEKELHEKFDRLKKLHQDEKKKLEDKKKSLDD---- 391
Query: 260 EVKILETANDIQERREQVLNRYADFKSEARSKREK 294
EV + E + ++ ++ R K +K
Sbjct: 392 EVNAFKQRKTAAELLQSQGSQAGGSQTLKRDKEKK 426
>4b28_A Metallopeptidase, family M24, putative; lyase,
imethylsulfonioproionate, acrylate, dimethylsulfide;
2.15A {Roseobacter denitrificans och 114}
Length = 470
Score = 31.5 bits (71), Expect = 2.5
Identities = 44/257 (17%), Positives = 75/257 (29%), Gaps = 52/257 (20%)
Query: 1186 HDQTPAIVKRH-----GDVIARWQKLLGD----SNARKQRLLRMQEQFRQ-------IED 1229
D +P + R A W D + R+ R R+ + + D
Sbjct: 43 GDGSPNDMNRVEIGPTQLAFAEWHTARLDLPDLAAMRRFRHRRLTDHVVARGYAGLLMFD 102
Query: 1230 L----YLTFAKKASSFNKPQP-----LSRDMEMSLQDGRSYLEIPMPGNNVFSASSFNSW 1280
Y T + +N P L D M + D ++ + V +
Sbjct: 103 PLNIRYATDSTNMQLWNTHNPFRATLLCADGYMVMWDYKNSPFLSEFNPLVREQRAGADL 162
Query: 1281 FENAEEDLTDPVRCNSIEEIRALREAHAQFQASLSSAQADFEALAALDQQIKSFNVGPNP 1340
F D D E+R L HA L+ + L AL
Sbjct: 163 FYFDRGDKVDVAADVFANEVRILLRDHAPGLRRLAVDKVMLHGLRAL------------- 209
Query: 1341 YTWFTMEALEDTWRNLQKIIKE-RDIELAKEATRQDENDALRKEFAKHANAFHQWLTETR 1399
+A + +++ ++ R + K DE A+R A + R
Sbjct: 210 ------QAQGFEIMDGEEVTEKARSV---KGP---DEIRAMRCASHACEVAVRKMEDFAR 257
Query: 1400 TSMMEGTGSLEQQLEAI 1416
+ + +G E + AI
Sbjct: 258 SKVGDGVTC-ENDIWAI 273
>2vh3_A Ranasmurfin, RSF-1; LTQ, bisltq, unknown function; HET: DAH TY2;
1.16A {Polypedates leucomystax} PDB: 2vh3_B*
Length = 113
Score = 29.7 bits (66), Expect = 2.5
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 333 LQAKIQKHQAFEAEVAAHSNAIVVLDNTGNDFYRDCEQAENWMSAREAFLNAEEVDSKTD 392
L +QKHQ F+ + A A + ++ R AE++ SA + E VD
Sbjct: 18 LAEALQKHQGFKKKSYALICAYLNYKEDAENYER---AAEDFDSAVKCTGCKEGVDLHEG 74
Query: 393 NVEALIKKHEDFDKAINAHEEKIGALQTLADQLIAADH 430
N E + + E F ++ + +G+L TL +L A H
Sbjct: 75 NPELIEEGFEKFLASLKIDRKALGSLCTLFQKLXAIPH 112
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 30.9 bits (69), Expect = 2.6
Identities = 17/90 (18%), Positives = 33/90 (36%), Gaps = 27/90 (30%)
Query: 1347 EALEDTWRNLQKI-IKERDIELAKEATRQDENDALRKEFAKHANAFHQWLTETRTSMMEG 1405
E++ WR Q+ ++E D A + E R++ K ++Q
Sbjct: 85 ESIRK-WREEQRKRLQELD---AASKVMEQE---WREKAKKDLEEWNQ------------ 125
Query: 1406 TGSLEQQLEAIK---RKAAE--VRSRRSDL 1430
+Q+E K R A + + +D+
Sbjct: 126 --RQSEQVEKNKINNRIADKAFYQQPDADI 153
Score = 29.4 bits (65), Expect = 6.4
Identities = 6/74 (8%), Positives = 23/74 (31%), Gaps = 13/74 (17%)
Query: 446 RWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIAEKLQLATEESYKDPANIQSKHQK 505
+WR + +++ + + + ++E W + + K++
Sbjct: 89 KWREEQRKRLQELDAASKVMEQEWREKAKKDLEEW------------NQRQSEQVEKNKI 136
Query: 506 H-QAFEAELAANAD 518
+ + + D
Sbjct: 137 NNRIADKAFYQQPD 150
Score = 29.4 bits (65), Expect = 6.4
Identities = 6/74 (8%), Positives = 23/74 (31%), Gaps = 13/74 (17%)
Query: 670 RWRLLKEALIEKRSRLGESQTLQQFSRDADEMENWIAEKLQLATEESYKDPANIQSKHQK 729
+WR + +++ + + + ++E W + + K++
Sbjct: 89 KWREEQRKRLQELDAASKVMEQEWREKAKKDLEEW------------NQRQSEQVEKNKI 136
Query: 730 H-QAFEAELAANAD 742
+ + + D
Sbjct: 137 NNRIADKAFYQQPD 150
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A
{Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Length = 995
Score = 31.6 bits (72), Expect = 2.6
Identities = 31/232 (13%), Positives = 69/232 (29%), Gaps = 16/232 (6%)
Query: 664 RKQVLDRWRLLKEALIEKRSRLGESQTLQQFSR---DADEMENWIAEKL----------Q 710
R L +W K+A +E R +++Q F + + E +
Sbjct: 766 RANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSL 825
Query: 711 LATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQCVGSEEAVQAR 770
K + ++ +A Q + + +++ +Q
Sbjct: 826 QTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKK--IAVLLQKY 883
Query: 771 LASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKDLDFWLGEVESLLTSEDSGKDLAS 830
+ + T K+ + + A +K+L+ + GE +SL +S
Sbjct: 884 NRILKKLENWATTKSVYLGSN-ETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSIL 942
Query: 831 VQNLIKKHQLVEADIQAHDDRIKDMNGQADSLIDSGQFDASSIQEKRQSINE 882
Q + V + D S ++ + + E+ Q I +
Sbjct: 943 AQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERLQKIED 994
Score = 30.4 bits (69), Expect = 5.8
Identities = 30/230 (13%), Positives = 56/230 (24%), Gaps = 24/230 (10%)
Query: 440 RKQVLDRWRLLKEALIEKRSRLGESQTLQQFSR------DADEMENWIA----------- 482
R L +W K+A +E R +++Q F ++
Sbjct: 766 RANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSL 825
Query: 483 ------EKLQLATEESYKDPANIQSKHQKHQAFEAELAANADRIQSVLAMGQNLIDKRQC 536
K + + P I S + E E A L+ K
Sbjct: 826 QTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNR 885
Query: 537 VGSEEAVQARLASIADQWEFLTQKTTEKSLKLKEANKQRTYIAAVKD-LPYFSKKDCEQA 595
+ + A S+ T KLK +++ Q
Sbjct: 886 ILKKLENWATTKSVYLGSNETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILAQL 945
Query: 596 ENWMSAREAFLNAEEVDSKTDNVEALIKKHEDFDKAINAHEEKIGALQTL 645
L + + E + + A E++ ++ L
Sbjct: 946 TELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERLQKIEDL 995
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty
acid synthase, acyl-carrier-protein, beta-ketoacyl RED
beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces
cerevisiae}
Length = 1688
Score = 31.0 bits (70), Expect = 4.2
Identities = 14/135 (10%), Positives = 31/135 (22%), Gaps = 29/135 (21%)
Query: 1449 RYTEHSTVGLAQQWDQLDQLGMRMQHNLEQ------QIQARNQSGVSEDA-----LKEFS 1497
+ + + D ++ L + + G S A +
Sbjct: 1300 SQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATIN 1359
Query: 1498 MMFKHFDKDKSGKLNQTEFKS----------------CLRALGYDL--PMVEEGQPDPEF 1539
M KH + + + K L+ L + D
Sbjct: 1360 EMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKIL 1419
Query: 1540 EAILDLVDPNRDGHV 1554
E ++ P++
Sbjct: 1420 EQFEYVLYPSKTLKT 1434
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Length = 526
Score = 30.7 bits (69), Expect = 4.3
Identities = 22/131 (16%), Positives = 49/131 (37%), Gaps = 4/131 (3%)
Query: 229 QERREQVLNRYAD-FKSEARSKREKLEDITVKEVKILETANDIQERREQVLNRYADFKSE 287
++R E V +Y D K + + E++ + E + + + Y +E
Sbjct: 105 EQRNELVRLKYNDKIKEKFGKELEEVYNFMNGEANAEIEDEKQFDILNKAVTSYNKILTE 164
Query: 288 ARSKREKLEDSRRFQYFKRDADELESWIY--EKLQAASDESYKETTNLQAK-IQKHQAFE 344
+ +L + + + +R E +K+ A + E +Q + IQ+
Sbjct: 165 EDLQMRRLATALQKEIGERTHAETVMVKEYRDKIDALKNAIEVERDGMQEEAIQEIAGMT 224
Query: 345 AEVAAHSNAIV 355
A+V ++ V
Sbjct: 225 ADVLEAASEEV 235
>2kav_A Sodium channel protein type 2 subunit alpha; voltage-gated sodium
channel, alternative splicing, disease epilepsy,
glycoprotein, ION transport; NMR {Homo sapiens} PDB:
2kbi_A
Length = 129
Score = 29.4 bits (66), Expect = 4.4
Identities = 14/72 (19%), Positives = 24/72 (33%), Gaps = 15/72 (20%)
Query: 1478 QQIQARNQSGVSEDALKEFSMMFKHFDKDKSGKLNQTEFKSCLRALGY------------ 1525
+ +SED + F +++ FD D + + + AL
Sbjct: 27 SVATEESAEPLSEDDFEMFYEVWEKFDPDATQFIEFAKLSDFADALDPPLLIAKPNKVQL 86
Query: 1526 ---DLPMVEEGQ 1534
DLPMV +
Sbjct: 87 IAMDLPMVSGDR 98
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction,
regulation, phosphorylation, G proteins, thioredoxin,
vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Length = 217
Score = 29.2 bits (65), Expect = 8.5
Identities = 14/136 (10%), Positives = 44/136 (32%), Gaps = 10/136 (7%)
Query: 235 VLNRYADFKSEARSKREKLEDITVKEVKILETANDIQERREQVLNRYADFKSEARSKREK 294
V+N + FK E+ ++ + + ++ ++R + ++K
Sbjct: 12 VINDWRKFKLESEDGDSIPPSKKEILRQMSSPQSRDDKDSKERMSRKMSIQEYELIHQDK 71
Query: 295 LEDSRRFQYFKRDADELESWIYEKLQAASDESYKETTNLQAKIQKHQAFEAEVAAHSNAI 354
++ +Y ++ ++ + + E ++ + F +
Sbjct: 72 EDEGCLRKYRRQCMQDMHQKLSFGPRYG---FVYE-------LETGEQFLETIEKEQKVT 121
Query: 355 VVLDNTGNDFYRDCEQ 370
++ N D R C+
Sbjct: 122 TIVVNIYEDGVRGCDA 137
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 29.7 bits (66), Expect = 9.5
Identities = 45/358 (12%), Positives = 111/358 (31%), Gaps = 27/358 (7%)
Query: 165 SMKKSDVLTLLNSNNKDWWKVEVNDRQGFVPAAYVKKMEAGLTASQQNLADVKEVKILET 224
S+ +L+++N + V + + + + G+ +Q L + +
Sbjct: 306 SILSLKLLSVMNMVSGRVHTYPVTENENLQNLKSWLQQDTGIPEEEQELLQASGLALNSA 365
Query: 225 ANDIQERREQVLNRYADFKSE---ARSKREKLEDITVKEVKILETANDIQERREQVLNRY 281
Q + + + + R+ + + + E+ + + + ++ L Y
Sbjct: 366 QPLTQYVIDCTVIDGRQGEGDLIFLFDNRKTVYEPQISLPAHPESVSIVLQDPKRPL-TY 424
Query: 282 ADFKSEARS-----KREKLEDSRRFQYFKRDADELESWIYEKLQAASDESYKETTNLQAK 336
+ + K + +R Q + L + E L + E L+AK
Sbjct: 425 THLRRVWGQIWQTIRALKEDCARLLQGQRTSMVNLLRYNTE-LSKKKNSMTSECEQLKAK 483
Query: 337 IQKHQAFEAEVAAHSNAIVVLDNTGNDFYRDCEQAENWMSAREAFLNAEEVDSKTDNVEA 396
+ ++ + + T + E A E EV + D + A
Sbjct: 484 LDFFRSSIQIDLEKYSEQMEFGITSEKLLSAWREMEQ---AVELCGREREVQALVDKMMA 540
Query: 397 LIKKHEDFDKAINAHEEKIGALQTLADQLI---------AADHYAAKPIDDKRKQVLDRW 447
L D + + G L L +Q D +D + ++
Sbjct: 541 LQTDSVDLQRNPLGRK-HRGTLDDLEEQARDLYRRLRERPRDQRTPGDSNDMVRLLILAI 599
Query: 448 RLLKEALIEKRSRLGESQTLQQFSRDADEMENWIAEKLQLATEESYKDPANIQSKHQK 505
+ ++ +I +L ++ ++ + + +++ E K Q K Q+
Sbjct: 600 QSFEKRVILIYDQLSKTVVCKRKALELSP----KVKEVMNLMREDEKIVVRRQEKRQQ 653
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.313 0.127 0.352
Gapped
Lambda K H
0.267 0.0796 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 23,305,068
Number of extensions: 1439530
Number of successful extensions: 4847
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3824
Number of HSP's successfully gapped: 914
Length of query: 1575
Length of database: 6,701,793
Length adjustment: 106
Effective length of query: 1469
Effective length of database: 3,742,167
Effective search space: 5497243323
Effective search space used: 5497243323
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (28.3 bits)