BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6945
(61 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|345486629|ref|XP_001605640.2| PREDICTED: CCR4-NOT transcription complex subunit 6-like [Nasonia
vitripennis]
Length = 560
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 53/60 (88%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
VIEFL++GRV SDH+DFKDL YKS L KI DK+N+FTHSFKLASAYSEDIMPYTNYT+
Sbjct: 431 VIEFLTSGRVASDHRDFKDLAYKSCLQKISGCDKTNEFTHSFKLASAYSEDIMPYTNYTF 490
>gi|332017071|gb|EGI57870.1| CCR4-NOT transcription complex subunit 6-like-B [Acromyrmex
echinatior]
Length = 455
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 52/60 (86%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
VIEFL++GRV +DH+DFKDL YKS L KI DK N+FTHSFKLASAYSEDIMPYTNYT+
Sbjct: 326 VIEFLTSGRVAADHRDFKDLAYKSCLQKISGCDKPNEFTHSFKLASAYSEDIMPYTNYTF 385
>gi|350406518|ref|XP_003487798.1| PREDICTED: hypothetical protein LOC100747801 [Bombus impatiens]
Length = 814
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 52/60 (86%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
VIEFL++GRV +DH+DFKDL YKS L KI DK N+FTHSFKLASAYSEDIMPYTNYT+
Sbjct: 685 VIEFLTSGRVAADHRDFKDLAYKSCLQKISGCDKPNEFTHSFKLASAYSEDIMPYTNYTF 744
>gi|328784245|ref|XP_396007.4| PREDICTED: hypothetical protein LOC412552 [Apis mellifera]
Length = 458
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 52/60 (86%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
VIEFL++GRV +DH+DFKDL YKS L KI DK N+FTHSFKLASAYSEDIMPYTNYT+
Sbjct: 329 VIEFLTSGRVAADHRDFKDLAYKSCLQKISGCDKPNEFTHSFKLASAYSEDIMPYTNYTF 388
>gi|307189213|gb|EFN73661.1| CCR4-NOT transcription complex subunit 6-like-B [Camponotus
floridanus]
Length = 462
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 52/60 (86%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
VIEFL++GRV +DH+DFKDL YKS L KI DK N+FTHSFKLASAYSEDIMPYTNYT+
Sbjct: 333 VIEFLTSGRVAADHRDFKDLAYKSCLQKISGCDKPNEFTHSFKLASAYSEDIMPYTNYTF 392
>gi|383861531|ref|XP_003706239.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like-B-like
[Megachile rotundata]
Length = 673
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 52/60 (86%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
VIEFL++GRV +DH+DFKDL YKS L KI DK N+FTHSFKLASAYSEDIMPYTNYT+
Sbjct: 544 VIEFLTSGRVAADHRDFKDLAYKSCLQKISGCDKPNEFTHSFKLASAYSEDIMPYTNYTF 603
>gi|307206307|gb|EFN84364.1| CCR4-NOT transcription complex subunit 6-like-B [Harpegnathos
saltator]
Length = 458
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 52/60 (86%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
VIEFL++GRV +DH+DFKDL YKS L KI DK N+FTHSFKLASAYSEDIMPYTNYT+
Sbjct: 329 VIEFLTSGRVAADHRDFKDLAYKSCLQKISGCDKPNEFTHSFKLASAYSEDIMPYTNYTF 388
>gi|340720404|ref|XP_003398629.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like [Bombus
terrestris]
Length = 836
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 52/60 (86%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
VIEFL++GRV +DH+DFKDL YKS L KI DK N+FTHSFKLASAYSEDIMPYTNYT+
Sbjct: 707 VIEFLTSGRVAADHRDFKDLAYKSCLQKISGCDKPNEFTHSFKLASAYSEDIMPYTNYTF 766
>gi|380018055|ref|XP_003692952.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex
subunit 6-like [Apis florea]
Length = 547
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 52/60 (86%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
VIEFL++GRV +DH+DFKDL YKS L KI DK N+FTHSFKLASAYSEDIMPYTNYT+
Sbjct: 418 VIEFLTSGRVAADHRDFKDLAYKSCLQKISGCDKPNEFTHSFKLASAYSEDIMPYTNYTF 477
>gi|347971836|ref|XP_313691.2| AGAP004405-PA [Anopheles gambiae str. PEST]
gi|333469051|gb|EAA44583.2| AGAP004405-PA [Anopheles gambiae str. PEST]
Length = 548
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 45/60 (75%), Positives = 50/60 (83%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
VIEFLS GRV+ DHQDFK+L YKS L +I D N+FTHSFKLASAYSEDIMPYTNYT+
Sbjct: 416 VIEFLSAGRVSMDHQDFKELGYKSCLQRISNCDTPNEFTHSFKLASAYSEDIMPYTNYTF 475
>gi|242007264|ref|XP_002424462.1| CCR4-NOT transcription complex subunit, putative [Pediculus humanus
corporis]
gi|212507862|gb|EEB11724.1| CCR4-NOT transcription complex subunit, putative [Pediculus humanus
corporis]
Length = 656
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 53/60 (88%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
VIEFLS+GRV++DH DFK+L YKSVL KI +K N+FTHSFKLASAYSEDIMP+TNYT+
Sbjct: 526 VIEFLSSGRVSADHPDFKELQYKSVLQKISGCEKPNEFTHSFKLASAYSEDIMPFTNYTF 585
>gi|157133993|ref|XP_001663108.1| carbon catabolite repressor protein [Aedes aegypti]
gi|108870647|gb|EAT34872.1| AAEL012925-PA [Aedes aegypti]
Length = 465
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 50/60 (83%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
VIEFLS GRV+ DHQDFK+L YKS L +I D N+FTHSFKLASAYSEDIMPYTNYT+
Sbjct: 228 VIEFLSAGRVSMDHQDFKELGYKSCLQRISNCDTPNEFTHSFKLASAYSEDIMPYTNYTF 287
>gi|189234750|ref|XP_974371.2| PREDICTED: similar to GA16037-PA [Tribolium castaneum]
Length = 562
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 50/60 (83%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
VIEFLSTGRV+ DH+DFKD YK L K+ DK N+FTHSFKLASAY+++IMP+TNYT+
Sbjct: 432 VIEFLSTGRVSQDHKDFKDFSYKQCLEKVLSCDKPNEFTHSFKLASAYNDEIMPFTNYTF 491
>gi|270001543|gb|EEZ97990.1| hypothetical protein TcasGA2_TC000387 [Tribolium castaneum]
Length = 434
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 50/60 (83%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
VIEFLSTGRV+ DH+DFKD YK L K+ DK N+FTHSFKLASAY+++IMP+TNYT+
Sbjct: 304 VIEFLSTGRVSQDHKDFKDFSYKQCLEKVLSCDKPNEFTHSFKLASAYNDEIMPFTNYTF 363
>gi|24649585|ref|NP_732967.1| twin, isoform B [Drosophila melanogaster]
gi|23172143|gb|AAF56256.2| twin, isoform B [Drosophila melanogaster]
gi|25009859|gb|AAN71099.1| AT23187p [Drosophila melanogaster]
gi|220951022|gb|ACL88054.1| twin-PB [synthetic construct]
gi|220957942|gb|ACL91514.1| twin-PB [synthetic construct]
Length = 545
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 40/60 (66%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
V+EFL GRV+ DH DFKD+ YKS L ++ ND +N+FTHSFKLASAY+EDIMP+TNYT+
Sbjct: 414 VVEFLGKGRVSMDHLDFKDMGYKSCLQRLLSND-TNEFTHSFKLASAYNEDIMPHTNYTF 472
>gi|24649581|ref|NP_732965.1| twin, isoform A [Drosophila melanogaster]
gi|24649583|ref|NP_732966.1| twin, isoform E [Drosophila melanogaster]
gi|28572072|ref|NP_788732.1| twin, isoform F [Drosophila melanogaster]
gi|17862252|gb|AAL39603.1| LD18435p [Drosophila melanogaster]
gi|23172141|gb|AAF56259.2| twin, isoform A [Drosophila melanogaster]
gi|23172142|gb|AAF56258.2| twin, isoform E [Drosophila melanogaster]
gi|28381449|gb|AAO41599.1| twin, isoform F [Drosophila melanogaster]
gi|220953408|gb|ACL89247.1| twin-PA [synthetic construct]
Length = 552
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 40/60 (66%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
V+EFL GRV+ DH DFKD+ YKS L ++ ND +N+FTHSFKLASAY+EDIMP+TNYT+
Sbjct: 421 VVEFLGKGRVSMDHLDFKDMGYKSCLQRLLSND-TNEFTHSFKLASAYNEDIMPHTNYTF 479
>gi|24649579|ref|NP_732964.1| twin, isoform C [Drosophila melanogaster]
gi|23172140|gb|AAN13986.1| twin, isoform C [Drosophila melanogaster]
gi|33589482|gb|AAQ22508.1| LD39302p [Drosophila melanogaster]
gi|220950318|gb|ACL87702.1| twin-PA [synthetic construct]
Length = 567
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
V+EFL GRV+ DH DFKD+ YKS L ++ ND +N+FTHSFKLASAY+EDIMP+TNYT+
Sbjct: 436 VVEFLGKGRVSMDHLDFKDMGYKSCLQRLLSND-TNEFTHSFKLASAYNEDIMPHTNYTF 494
>gi|328705662|ref|XP_001947380.2| PREDICTED: CCR4-NOT transcription complex subunit 6-like
[Acyrthosiphon pisum]
Length = 572
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 52/60 (86%), Gaps = 1/60 (1%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
VIEFLS G+V+SDHQDFKDL YK++L+KI D+ N+F HSFKL+SAY E+IMP+TNYT+
Sbjct: 442 VIEFLSAGKVSSDHQDFKDLQYKTLLHKISTCDRPNEFMHSFKLSSAY-ENIMPFTNYTF 500
>gi|21654881|gb|AAK85705.1| CCR4 [Drosophila melanogaster]
Length = 566
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
V+EFL GRV+ DH DFKD+ YKS L ++ ND +N+FTHSFKLASAY+EDIMP+TNYT+
Sbjct: 435 VVEFLGKGRVSMDHLDFKDMGYKSCLQRLLSND-TNEFTHSFKLASAYNEDIMPHTNYTF 493
>gi|390178230|ref|XP_003736602.1| GA16037, isoform D [Drosophila pseudoobscura pseudoobscura]
gi|388859370|gb|EIM52675.1| GA16037, isoform D [Drosophila pseudoobscura pseudoobscura]
Length = 565
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
V+E+L GRV+ DH DFKD+ YKS L ++ ND +N+FTHSFKLASAYSEDIMP+TNYT+
Sbjct: 435 VVEYLGKGRVSMDHLDFKDMGYKSCLQRLLSND-TNEFTHSFKLASAYSEDIMPHTNYTF 493
>gi|24649587|ref|NP_732968.1| twin, isoform D [Drosophila melanogaster]
gi|23172144|gb|AAN13987.1| twin, isoform D [Drosophila melanogaster]
Length = 358
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
V+EFL GRV+ DH DFKD+ YKS L ++ ND +N+FTHSFKLASAY+EDIMP+TNYT+
Sbjct: 227 VVEFLGKGRVSMDHLDFKDMGYKSCLQRLLSND-TNEFTHSFKLASAYNEDIMPHTNYTF 285
>gi|390178234|ref|XP_003736604.1| GA16037, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859372|gb|EIM52677.1| GA16037, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 544
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
V+E+L GRV+ DH DFKD+ YKS L ++ ND +N+FTHSFKLASAYSEDIMP+TNYT+
Sbjct: 414 VVEYLGKGRVSMDHLDFKDMGYKSCLQRLLSND-TNEFTHSFKLASAYSEDIMPHTNYTF 472
>gi|390178228|ref|XP_003736601.1| GA16037, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859369|gb|EIM52674.1| GA16037, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 551
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
V+E+L GRV+ DH DFKD+ YKS L ++ ND +N+FTHSFKLASAYSEDIMP+TNYT+
Sbjct: 421 VVEYLGKGRVSMDHLDFKDMGYKSCLQRLLSND-TNEFTHSFKLASAYSEDIMPHTNYTF 479
>gi|390178232|ref|XP_003736603.1| GA16037, isoform E [Drosophila pseudoobscura pseudoobscura]
gi|388859371|gb|EIM52676.1| GA16037, isoform E [Drosophila pseudoobscura pseudoobscura]
Length = 357
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
V+E+L GRV+ DH DFKD+ YKS L ++ ND +N+FTHSFKLASAYSEDIMP+TNYT+
Sbjct: 227 VVEYLGKGRVSMDHLDFKDMGYKSCLQRLLSND-TNEFTHSFKLASAYSEDIMPHTNYTF 285
>gi|357608099|gb|EHJ65824.1| hypothetical protein KGM_14530 [Danaus plexippus]
Length = 471
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 51/60 (85%), Gaps = 2/60 (3%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
V+EFLS GRV+S+H+DFK+L Y S L ++ ++ ++FTH+FKLASAYSEDIMPYTNYT+
Sbjct: 344 VVEFLSAGRVSSEHRDFKELGYASSLRRMPGSE--HEFTHNFKLASAYSEDIMPYTNYTF 401
>gi|321474661|gb|EFX85626.1| hypothetical protein DAPPUDRAFT_46150 [Daphnia pulex]
Length = 552
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 50/62 (80%), Gaps = 2/62 (3%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQN--DKSNDFTHSFKLASAYSEDIMPYTNY 58
VIEFL++ R++++H DFK+L YK+ L K N +K+N+FTH F+L++AY+ D+MPY+NY
Sbjct: 419 VIEFLNSSRISANHPDFKELGYKTCLQKGIANFSEKTNEFTHPFRLSTAYTTDVMPYSNY 478
Query: 59 TY 60
TY
Sbjct: 479 TY 480
>gi|427781155|gb|JAA56029.1| Putative twin [Rhipicephalus pulchellus]
Length = 368
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKS---NDFTHSFKLASAYSEDIMPYTN 57
VIEFL TG V++DH DFK+L YK L K+C S +TH F++ AY + IMPYTN
Sbjct: 239 VIEFLKTGHVSADHPDFKELGYKDCLRKMCLESDSLIGGSYTHPFEMKEAYGDGIMPYTN 298
Query: 58 YTY 60
+T+
Sbjct: 299 FTF 301
>gi|241691941|ref|XP_002412935.1| carbon catabolite repressor protein, putative [Ixodes scapularis]
gi|215506737|gb|EEC16231.1| carbon catabolite repressor protein, putative [Ixodes scapularis]
Length = 292
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 3/62 (4%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKS---NDFTHSFKLASAYSEDIMPYTN 57
VIEFL TG V++DH DFK+L YK L K+C S + +TH FK+ AY++ +MPYTN
Sbjct: 231 VIEFLKTGHVSADHPDFKELGYKDCLRKMCIESDSFVGSTYTHPFKIKEAYADGVMPYTN 290
Query: 58 YT 59
YT
Sbjct: 291 YT 292
>gi|443695596|gb|ELT96463.1| hypothetical protein CAPTEDRAFT_169418 [Capitella teleta]
Length = 540
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 46/60 (76%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
V+E+L++G V ++H+DFK+L Y+ L K+ + + F+H FKL+ AY++D+MPYTNYT+
Sbjct: 397 VVEYLNSGHVDANHRDFKELGYEECLRKLSNDPNKDIFSHIFKLSQAYNKDVMPYTNYTH 456
>gi|427794087|gb|JAA62495.1| Putative twin, partial [Rhipicephalus pulchellus]
Length = 326
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKS---NDFTHSFKLASAYSEDIMPYTN 57
VIEFL TG V++DH DFK+L YK L K+C S +TH F++ AY + IMPYTN
Sbjct: 197 VIEFLKTGHVSADHPDFKELGYKDCLRKMCLESDSLIGGSYTHPFEMKEAYGDGIMPYTN 256
Query: 58 YTY 60
+T+
Sbjct: 257 FTF 259
>gi|291221838|ref|XP_002730926.1| PREDICTED: CCR4-NOT transcription complex, subunit 6-like
[Saccoglossus kowalevskii]
Length = 545
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/60 (55%), Positives = 39/60 (65%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
VIEFLS G V +H DFKD+ Y S L ND ++F HSFKL AY +IM +TNYTY
Sbjct: 417 VIEFLSQGAVDVNHADFKDIKYHSCLTNFSSNDHPSEFCHSFKLRRAYEGNIMSFTNYTY 476
>gi|260816574|ref|XP_002603045.1| hypothetical protein BRAFLDRAFT_130644 [Branchiostoma floridae]
gi|229288361|gb|EEN59057.1| hypothetical protein BRAFLDRAFT_130644 [Branchiostoma floridae]
Length = 554
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKI-CQNDKSNDFTHSFKLASAYSEDIMPYTNYT 59
V+E+L+TGR+++ H DFK+L Y L C + K ++ THSFKL AY DI+P+TNYT
Sbjct: 420 VVEYLATGRISTSHLDFKELAYSECLGNFSCADHKPSEVTHSFKLKQAYESDILPHTNYT 479
Query: 60 Y 60
+
Sbjct: 480 F 480
>gi|405974982|gb|EKC39585.1| CCR4-NOT transcription complex subunit 6-like protein [Crassostrea
gigas]
Length = 871
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 42/60 (70%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
V+E+L +G+V H DFKD+ Y+ L KI ++ + F H F+L +AY +DIMP+TNYTY
Sbjct: 738 VVEYLLSGKVARTHTDFKDIGYEDALQKIHASNDKDSFCHDFRLNTAYEKDIMPFTNYTY 797
>gi|426351349|ref|XP_004043214.1| PREDICTED: CCR4-NOT transcription complex subunit 6 [Gorilla
gorilla gorilla]
Length = 661
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPY-KSVLNKIC--QNDKSND-FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y +S+ N C +N +N TH FKL SAY +MPYT
Sbjct: 525 VVEYLSTGGVETNHKDFKELRYNESLTNFSCHGKNGTTNGRITHGFKLQSAYESGLMPYT 584
Query: 57 NYTY 60
NYT+
Sbjct: 585 NYTF 588
>gi|47227637|emb|CAG09634.1| unnamed protein product [Tetraodon nigroviridis]
Length = 553
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ + THSF+L SAY+ ++MPYT
Sbjct: 414 VVEYLSNGGVADNHKDFKELRYNECLTNFSCNGKNGNSDGSITHSFQLKSAYNSNLMPYT 473
Query: 57 NYTY 60
NYTY
Sbjct: 474 NYTY 477
>gi|345307580|ref|XP_001505680.2| PREDICTED: CCR4-NOT transcription complex subunit 6
[Ornithorhynchus anatinus]
Length = 557
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 421 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYENGLMPYT 480
Query: 57 NYTY 60
NYT+
Sbjct: 481 NYTF 484
>gi|66472474|ref|NP_001018474.1| CCR4-NOT transcription complex subunit 6-like [Danio rerio]
gi|63100861|gb|AAH95634.1| CCR4-NOT transcription complex, subunit 6-like [Danio rerio]
gi|182890998|gb|AAI64274.1| Cnot6l protein [Danio rerio]
Length = 559
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ THSF+L SAY ++MPYT
Sbjct: 414 VVEYLSNGGVAENHKDFKELRYSDCLTNFSCNGKNGKPDGSITHSFQLKSAYEGNLMPYT 473
Query: 57 NYTY 60
NYTY
Sbjct: 474 NYTY 477
>gi|410922487|ref|XP_003974714.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like [Takifugu
rubripes]
Length = 559
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ + THSF+L SAY ++MPYT
Sbjct: 420 VVEYLSNGGVADNHKDFKELRYNECLTNFSCNGKNGNSDGSITHSFQLKSAYDSNVMPYT 479
Query: 57 NYTY 60
NYTY
Sbjct: 480 NYTY 483
>gi|426228686|ref|XP_004008427.1| PREDICTED: CCR4-NOT transcription complex subunit 6 [Ovis aries]
Length = 557
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 421 VVEYLSTGEVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYESGLMPYT 480
Query: 57 NYTY 60
NYT+
Sbjct: 481 NYTF 484
>gi|449267172|gb|EMC78138.1| CCR4-NOT transcription complex subunit 6, partial [Columba livia]
Length = 551
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 415 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYENGLMPYT 474
Query: 57 NYTY 60
NYT+
Sbjct: 475 NYTF 478
>gi|363739032|ref|XP_414612.3| PREDICTED: CCR4-NOT transcription complex subunit 6 [Gallus gallus]
Length = 557
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 421 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYENGLMPYT 480
Query: 57 NYTY 60
NYT+
Sbjct: 481 NYTF 484
>gi|410947921|ref|XP_003980690.1| PREDICTED: CCR4-NOT transcription complex subunit 6 [Felis catus]
Length = 552
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 416 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYESGLMPYT 475
Query: 57 NYTY 60
NYT+
Sbjct: 476 NYTF 479
>gi|301784837|ref|XP_002927833.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like
[Ailuropoda melanoleuca]
gi|281337915|gb|EFB13499.1| hypothetical protein PANDA_017669 [Ailuropoda melanoleuca]
Length = 557
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 421 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYESGLMPYT 480
Query: 57 NYTY 60
NYT+
Sbjct: 481 NYTF 484
>gi|155372049|ref|NP_001094631.1| CCR4-NOT transcription complex subunit 6 [Bos taurus]
gi|151556290|gb|AAI50117.1| CNOT6 protein [Bos taurus]
gi|296486237|tpg|DAA28350.1| TPA: CCR4-NOT transcription complex, subunit 6 [Bos taurus]
gi|440902120|gb|ELR52961.1| CCR4-NOT transcription complex subunit 6 [Bos grunniens mutus]
Length = 557
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 421 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYESGLMPYT 480
Query: 57 NYTY 60
NYT+
Sbjct: 481 NYTF 484
>gi|73970321|ref|XP_538584.2| PREDICTED: CCR4-NOT transcription complex subunit 6 isoform 1
[Canis lupus familiaris]
Length = 557
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 421 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYESGLMPYT 480
Query: 57 NYTY 60
NYT+
Sbjct: 481 NYTF 484
>gi|194219488|ref|XP_001500898.2| PREDICTED: CCR4-NOT transcription complex subunit 6 [Equus
caballus]
Length = 557
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 421 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYESGLMPYT 480
Query: 57 NYTY 60
NYT+
Sbjct: 481 NYTF 484
>gi|395505206|ref|XP_003756935.1| PREDICTED: CCR4-NOT transcription complex subunit 6 [Sarcophilus
harrisii]
Length = 557
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 421 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYENGLMPYT 480
Query: 57 NYTY 60
NYT+
Sbjct: 481 NYTF 484
>gi|344265369|ref|XP_003404757.1| PREDICTED: CCR4-NOT transcription complex subunit 6 [Loxodonta
africana]
Length = 557
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 421 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYENGLMPYT 480
Query: 57 NYTY 60
NYT+
Sbjct: 481 NYTF 484
>gi|326928643|ref|XP_003210485.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex
subunit 6-like [Meleagris gallopavo]
Length = 546
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 410 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYENGLMPYT 469
Query: 57 NYTY 60
NYT+
Sbjct: 470 NYTF 473
>gi|126291655|ref|XP_001381153.1| PREDICTED: CCR4-NOT transcription complex subunit 6 [Monodelphis
domestica]
Length = 557
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 421 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYENGLMPYT 480
Query: 57 NYTY 60
NYT+
Sbjct: 481 NYTF 484
>gi|431892758|gb|ELK03191.1| CCR4-NOT transcription complex subunit 6 [Pteropus alecto]
Length = 499
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 363 VVEYLSTGGVETNHKDFKELRYSESLTNFSCNGKNGTTNGRITHGFKLKSAYESGLMPYT 422
Query: 57 NYTY 60
NYT+
Sbjct: 423 NYTF 426
>gi|449474671|ref|XP_004175896.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex
subunit 6 [Taeniopygia guttata]
Length = 557
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 421 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYENGLMPYT 480
Query: 57 NYTY 60
NYT+
Sbjct: 481 NYTF 484
>gi|21654885|gb|AAK85707.1| CCR4 [Mus musculus]
Length = 557
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 421 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGMTNGRITHGFKLKSAYENGLMPYT 480
Query: 57 NYTY 60
NYT+
Sbjct: 481 NYTF 484
>gi|387015062|gb|AFJ49650.1| CCR4-NOT transcription complex subunit 6-like [Crotalus adamanteus]
Length = 557
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 421 VVEYLSTGGVETNHKDFKELRYNESLTNFSYNGKNGTTNGRITHGFKLKSAYENGLMPYT 480
Query: 57 NYTY 60
NYT+
Sbjct: 481 NYTF 484
>gi|395853425|ref|XP_003799211.1| PREDICTED: CCR4-NOT transcription complex subunit 6 [Otolemur
garnettii]
Length = 552
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 416 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYESGLMPYT 475
Query: 57 NYTY 60
NYT+
Sbjct: 476 NYTF 479
>gi|149052414|gb|EDM04231.1| similar to CCR4, isoform CRA_b [Rattus norvegicus]
Length = 521
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 385 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGMTNGRITHGFKLKSAYENGLMPYT 444
Query: 57 NYTY 60
NYT+
Sbjct: 445 NYTF 448
>gi|148701793|gb|EDL33740.1| CCR4-NOT transcription complex, subunit 6, isoform CRA_d [Mus
musculus]
Length = 524
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 388 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGMTNGRITHGFKLKSAYENGLMPYT 447
Query: 57 NYTY 60
NYT+
Sbjct: 448 NYTF 451
>gi|335283025|ref|XP_003123675.2| PREDICTED: CCR4-NOT transcription complex subunit 6 [Sus scrofa]
Length = 552
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 416 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYESGLMPYT 475
Query: 57 NYTY 60
NYT+
Sbjct: 476 NYTF 479
>gi|417402716|gb|JAA48194.1| Putative ccr4-not transcription complex subunit 6 [Desmodus
rotundus]
Length = 557
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 421 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYESGLMPYT 480
Query: 57 NYTY 60
NYT+
Sbjct: 481 NYTF 484
>gi|149052413|gb|EDM04230.1| similar to CCR4, isoform CRA_a [Rattus norvegicus]
Length = 382
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 246 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGMTNGRITHGFKLKSAYENGLMPYT 305
Query: 57 NYTY 60
NYT+
Sbjct: 306 NYTF 309
>gi|327265432|ref|XP_003217512.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like [Anolis
carolinensis]
Length = 557
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 421 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYENGLMPYT 480
Query: 57 NYTY 60
NYT+
Sbjct: 481 NYTF 484
>gi|34980912|gb|AAH57190.1| Cnot6 protein, partial [Mus musculus]
Length = 374
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 238 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGMTNGRITHGFKLKSAYENGLMPYT 297
Query: 57 NYTY 60
NYT+
Sbjct: 298 NYTF 301
>gi|348514103|ref|XP_003444580.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like
[Oreochromis niloticus]
Length = 571
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ + THSF+L SAY ++MPYT
Sbjct: 432 VVEYLSNGGVAENHKDFKELRYSECLTNFNCNGKNGNSDGSITHSFQLKSAYDSNLMPYT 491
Query: 57 NYTY 60
NYTY
Sbjct: 492 NYTY 495
>gi|344246772|gb|EGW02876.1| CCR4-NOT transcription complex subunit 6 [Cricetulus griseus]
Length = 382
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 246 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGMTNGRITHGFKLKSAYENGLMPYT 305
Query: 57 NYTY 60
NYT+
Sbjct: 306 NYTF 309
>gi|37360278|dbj|BAC98117.1| mKIAA1194 protein [Mus musculus]
Length = 376
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 240 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGMTNGRITHGFKLKSAYENGLMPYT 299
Query: 57 NYTY 60
NYT+
Sbjct: 300 NYTF 303
>gi|62078445|ref|NP_001013878.1| CCR4-NOT transcription complex subunit 6 [Rattus norvegicus]
gi|46395892|sp|Q8K3P5.2|CNOT6_MOUSE RecName: Full=CCR4-NOT transcription complex subunit 6; AltName:
Full=CCR4 carbon catabolite repression 4-like; AltName:
Full=Carbon catabolite repressor protein 4 homolog;
AltName: Full=Cytoplasmic deadenylase
gi|81884475|sp|Q6AXU9.1|CNOT6_RAT RecName: Full=CCR4-NOT transcription complex subunit 6; AltName:
Full=CCR4 carbon catabolite repression 4-like; AltName:
Full=Carbon catabolite repressor protein 4 homolog;
AltName: Full=Cytoplasmic deadenylase
gi|50927394|gb|AAH79308.1| CCR4-NOT transcription complex, subunit 6 [Rattus norvegicus]
gi|148701792|gb|EDL33739.1| CCR4-NOT transcription complex, subunit 6, isoform CRA_c [Mus
musculus]
Length = 557
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 421 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGMTNGRITHGFKLKSAYENGLMPYT 480
Query: 57 NYTY 60
NYT+
Sbjct: 481 NYTF 484
>gi|148701791|gb|EDL33738.1| CCR4-NOT transcription complex, subunit 6, isoform CRA_b [Mus
musculus]
gi|149052416|gb|EDM04233.1| similar to CCR4, isoform CRA_d [Rattus norvegicus]
Length = 457
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 321 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGMTNGRITHGFKLKSAYENGLMPYT 380
Query: 57 NYTY 60
NYT+
Sbjct: 381 NYTF 384
>gi|166215964|sp|A2BHJ4.1|CNO6L_DANRE RecName: Full=CCR4-NOT transcription complex subunit 6-like
Length = 559
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ THSF+L SAY ++MPYT
Sbjct: 414 VVEYLSNGGVAENHKDFKELRYSDCLTNFSCNGKNGKPDGSITHSFQLKSAYEGNLMPYT 473
Query: 57 NYTY 60
NYTY
Sbjct: 474 NYTY 477
>gi|47059015|ref|NP_997649.1| CCR4-NOT transcription complex subunit 6 [Mus musculus]
gi|347300435|ref|NP_001184194.1| CCR4-NOT transcription complex subunit 6 [Xenopus laevis]
gi|82178513|sp|Q5BJ41.1|CNOT6_XENLA RecName: Full=CCR4-NOT transcription complex subunit 6; AltName:
Full=Cytoplasmic deadenylase
gi|38566259|gb|AAH62950.1| CCR4-NOT transcription complex, subunit 6 [Mus musculus]
gi|60552311|gb|AAH91632.1| Unknown (protein for MGC:98472) [Xenopus laevis]
gi|148701790|gb|EDL33737.1| CCR4-NOT transcription complex, subunit 6, isoform CRA_a [Mus
musculus]
gi|149052415|gb|EDM04232.1| similar to CCR4, isoform CRA_c [Rattus norvegicus]
Length = 552
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 416 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGMTNGRITHGFKLKSAYENGLMPYT 475
Query: 57 NYTY 60
NYT+
Sbjct: 476 NYTF 479
>gi|29612526|gb|AAH49984.1| Cnot6 protein, partial [Mus musculus]
Length = 399
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 263 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGMTNGRITHGFKLKSAYENGLMPYT 322
Query: 57 NYTY 60
NYT+
Sbjct: 323 NYTF 326
>gi|354486491|ref|XP_003505414.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like
[Cricetulus griseus]
Length = 551
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 415 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGMTNGRITHGFKLKSAYENGLMPYT 474
Query: 57 NYTY 60
NYT+
Sbjct: 475 NYTF 478
>gi|355680035|gb|AER96464.1| CCR4-NOT transcription complex, subunit 6 [Mustela putorius furo]
Length = 203
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y L N K+ TH FKL SAY +MPYT
Sbjct: 68 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYESGLMPYT 127
Query: 57 NYTY 60
NYT+
Sbjct: 128 NYTF 131
>gi|47210434|emb|CAF92416.1| unnamed protein product [Tetraodon nigroviridis]
Length = 920
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V H+DFK+L Y L K N K+ TH FKL SAY +MPYT
Sbjct: 784 VVEYLSTGAVDCTHKDFKELRYSDSLTKFNCNGKNGTSNGMITHGFKLKSAYENGLMPYT 843
Query: 57 NYTY 60
NYT+
Sbjct: 844 NYTF 847
>gi|432951347|ref|XP_004084786.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like [Oryzias
latipes]
Length = 488
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ + THSF+L SAY +MPYT
Sbjct: 409 VVEYLSNGGVAENHKDFKELRYNECLTNFNCNGKNGNSDGSITHSFQLKSAYDSSLMPYT 468
Query: 57 NYTY 60
NYTY
Sbjct: 469 NYTY 472
>gi|432878651|ref|XP_004073362.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like [Oryzias
latipes]
Length = 559
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKS----NDFTHSFKLASAYSEDIMPYT 56
V+E+LSTG V H+DFK+L Y L K N K+ TH FKL SAY +MPYT
Sbjct: 422 VVEYLSTGGVDCTHKDFKELRYSDCLTKFNCNGKNSTSNGRITHGFKLKSAYENGLMPYT 481
Query: 57 NYTY 60
NYT+
Sbjct: 482 NYTF 485
>gi|6330365|dbj|BAA86508.1| KIAA1194 protein [Homo sapiens]
Length = 575
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPY-KSVLNKIC--QNDKSND-FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y +S+ N C +N +N TH FKL SAY +MPYT
Sbjct: 439 VVEYLSTGGVETNHKDFKELRYNESLTNFSCHGKNGTTNGRITHGFKLQSAYESGLMPYT 498
Query: 57 NYTY 60
NYT+
Sbjct: 499 NYTF 502
>gi|397470333|ref|XP_003806779.1| PREDICTED: CCR4-NOT transcription complex subunit 6 [Pan paniscus]
Length = 552
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPY-KSVLNKIC--QNDKSND-FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y +S+ N C +N +N TH FKL SAY +MPYT
Sbjct: 416 VVEYLSTGGVETNHKDFKELRYNESLTNFSCHGKNGTTNGRITHGFKLQSAYESGLMPYT 475
Query: 57 NYTY 60
NYT+
Sbjct: 476 NYTF 479
>gi|383420253|gb|AFH33340.1| CCR4-NOT transcription complex subunit 6 [Macaca mulatta]
Length = 552
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPY-KSVLNKIC--QNDKSND-FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y +S+ N C +N +N TH FKL SAY +MPYT
Sbjct: 416 VVEYLSTGGVETNHKDFKELRYNESLTNFSCHGKNGTTNGRITHGFKLKSAYESGLMPYT 475
Query: 57 NYTY 60
NYT+
Sbjct: 476 NYTF 479
>gi|388452682|ref|NP_001253950.1| CCR4-NOT transcription complex subunit 6 [Macaca mulatta]
gi|355691937|gb|EHH27122.1| hypothetical protein EGK_17241 [Macaca mulatta]
gi|355750495|gb|EHH54833.1| hypothetical protein EGM_15750 [Macaca fascicularis]
gi|383409699|gb|AFH28063.1| CCR4-NOT transcription complex subunit 6 [Macaca mulatta]
gi|384943892|gb|AFI35551.1| CCR4-NOT transcription complex subunit 6 [Macaca mulatta]
gi|387540374|gb|AFJ70814.1| CCR4-NOT transcription complex subunit 6 [Macaca mulatta]
Length = 557
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPY-KSVLNKIC--QNDKSND-FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y +S+ N C +N +N TH FKL SAY +MPYT
Sbjct: 421 VVEYLSTGGVETNHKDFKELRYNESLTNFSCHGKNGTTNGRITHGFKLKSAYESGLMPYT 480
Query: 57 NYTY 60
NYT+
Sbjct: 481 NYTF 484
>gi|403307009|ref|XP_003944007.1| PREDICTED: CCR4-NOT transcription complex subunit 6 [Saimiri
boliviensis boliviensis]
Length = 552
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPY-KSVLNKIC--QNDKSND-FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y +S+ N C +N +N TH FKL SAY +MPYT
Sbjct: 416 VVEYLSTGGVETNHKDFKELRYNESLTNFSCHGKNGTTNGRITHGFKLKSAYESGLMPYT 475
Query: 57 NYTY 60
NYT+
Sbjct: 476 NYTF 479
>gi|332261099|ref|XP_003279613.1| PREDICTED: CCR4-NOT transcription complex subunit 6 [Nomascus
leucogenys]
Length = 557
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPY-KSVLNKIC--QNDKSND-FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y +S+ N C +N +N TH FKL SAY +MPYT
Sbjct: 421 VVEYLSTGGVETNHKDFKELRYNESLTNFSCHGKNGTTNGRITHGFKLQSAYESGLMPYT 480
Query: 57 NYTY 60
NYT+
Sbjct: 481 NYTF 484
>gi|28872863|ref|NP_056270.2| CCR4-NOT transcription complex subunit 6 [Homo sapiens]
gi|114603885|ref|XP_001155177.1| PREDICTED: CCR4-NOT transcription complex subunit 6 isoform 1 [Pan
troglodytes]
gi|410040125|ref|XP_003950744.1| PREDICTED: CCR4-NOT transcription complex subunit 6 [Pan
troglodytes]
gi|46396033|sp|Q9ULM6.2|CNOT6_HUMAN RecName: Full=CCR4-NOT transcription complex subunit 6; AltName:
Full=CCR4 carbon catabolite repression 4-like; AltName:
Full=Carbon catabolite repressor protein 4 homolog;
AltName: Full=Cytoplasmic deadenylase
gi|119574137|gb|EAW53752.1| CCR4-NOT transcription complex, subunit 6, isoform CRA_a [Homo
sapiens]
gi|119574138|gb|EAW53753.1| CCR4-NOT transcription complex, subunit 6, isoform CRA_a [Homo
sapiens]
gi|156230979|gb|AAI52470.1| CNOT6 protein [Homo sapiens]
gi|168269724|dbj|BAG09989.1| CCR4-NOT transcription complex subunit 6 [synthetic construct]
gi|182887909|gb|AAI60174.1| CCR4-NOT transcription complex, subunit 6 [synthetic construct]
gi|410213314|gb|JAA03876.1| CCR4-NOT transcription complex, subunit 6 [Pan troglodytes]
gi|410265862|gb|JAA20897.1| CCR4-NOT transcription complex, subunit 6 [Pan troglodytes]
gi|410307074|gb|JAA32137.1| CCR4-NOT transcription complex, subunit 6 [Pan troglodytes]
gi|410336171|gb|JAA37032.1| CCR4-NOT transcription complex, subunit 6 [Pan troglodytes]
Length = 557
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPY-KSVLNKIC--QNDKSND-FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y +S+ N C +N +N TH FKL SAY +MPYT
Sbjct: 421 VVEYLSTGGVETNHKDFKELRYNESLTNFSCHGKNGTTNGRITHGFKLQSAYESGLMPYT 480
Query: 57 NYTY 60
NYT+
Sbjct: 481 NYTF 484
>gi|402873674|ref|XP_003900692.1| PREDICTED: CCR4-NOT transcription complex subunit 6, partial [Papio
anubis]
Length = 514
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPY-KSVLNKIC--QNDKSND-FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y +S+ N C +N +N TH FKL SAY +MPYT
Sbjct: 378 VVEYLSTGGVETNHKDFKELRYNESLTNFSCHGKNGTTNGRITHGFKLKSAYESGLMPYT 437
Query: 57 NYTY 60
NYT+
Sbjct: 438 NYTF 441
>gi|119574139|gb|EAW53754.1| CCR4-NOT transcription complex, subunit 6, isoform CRA_b [Homo
sapiens]
Length = 382
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPY-KSVLNKIC--QNDKSND-FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y +S+ N C +N +N TH FKL SAY +MPYT
Sbjct: 246 VVEYLSTGGVETNHKDFKELRYNESLTNFSCHGKNGTTNGRITHGFKLQSAYESGLMPYT 305
Query: 57 NYTY 60
NYT+
Sbjct: 306 NYTF 309
>gi|390459517|ref|XP_002744504.2| PREDICTED: CCR4-NOT transcription complex subunit 6 [Callithrix
jacchus]
Length = 552
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPY-KSVLNKIC--QNDKSND-FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y +S+ N C +N +N TH FKL SAY +MPYT
Sbjct: 416 VVEYLSTGGVETNHKDFKELRYNESLTNFSCHGKNGTTNGRITHGFKLKSAYESGLMPYT 475
Query: 57 NYTY 60
NYT+
Sbjct: 476 NYTF 479
>gi|380800333|gb|AFE72042.1| CCR4-NOT transcription complex subunit 6, partial [Macaca mulatta]
Length = 408
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPY-KSVLNKIC--QNDKSND-FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y +S+ N C +N +N TH FKL SAY +MPYT
Sbjct: 272 VVEYLSTGGVETNHKDFKELRYNESLTNFSCHGKNGTTNGRITHGFKLKSAYESGLMPYT 331
Query: 57 NYTY 60
NYT+
Sbjct: 332 NYTF 335
>gi|301753387|ref|XP_002912543.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like
[Ailuropoda melanoleuca]
Length = 660
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 524 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 583
Query: 57 NYTY 60
NYT+
Sbjct: 584 NYTF 587
>gi|410913879|ref|XP_003970416.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like [Takifugu
rubripes]
Length = 571
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V H+DFK+L Y L K N K+ TH FKL SAY +MPYT
Sbjct: 435 VVEYLSTGAVDCTHKDFKELRYSDSLTKFNCNGKNGTSNGLITHGFKLKSAYENGLMPYT 494
Query: 57 NYTY 60
NYT+
Sbjct: 495 NYTF 498
>gi|297676927|ref|XP_002816370.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like [Pongo
abelii]
Length = 196
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPY-KSVLNKIC--QNDKSND-FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V ++H+DFK+L Y +S+ N C +N +N TH FKL SAY +MPYT
Sbjct: 60 VVEYLSTGGVETNHKDFKELRYNESLTNFSCHGKNGTTNGRITHGFKLQSAYESGLMPYT 119
Query: 57 NYTY 60
NYT+
Sbjct: 120 NYTF 123
>gi|395834346|ref|XP_003790167.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like [Otolemur
garnettii]
Length = 948
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 812 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 871
Query: 57 NYTY 60
NYT+
Sbjct: 872 NYTF 875
>gi|391338366|ref|XP_003743530.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like
[Metaseiulus occidentalis]
Length = 569
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDL-PYKSVLNKICQNDK---SNDFTHSFKLASAYSEDIMPYT 56
VIEFL GR+ DH DFKDL Y+S L K+ + N +TH F L AY++ MPYT
Sbjct: 447 VIEFLRNGRIACDHPDFKDLNSYRSCLKKLMVENSPLVGNAYTHPFVLEQAYADTDMPYT 506
Query: 57 NYTY 60
NYT+
Sbjct: 507 NYTF 510
>gi|327274248|ref|XP_003221890.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like [Anolis
carolinensis]
Length = 656
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 520 VVEYLSNGIVADNHKDFKELRYNDCLVNFSGNGKNGASEGRITHGFQLKSAYENNLMPYT 579
Query: 57 NYTY 60
NYT+
Sbjct: 580 NYTF 583
>gi|348583898|ref|XP_003477709.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like [Cavia
porcellus]
Length = 603
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 467 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 526
Query: 57 NYTY 60
NYT+
Sbjct: 527 NYTF 530
>gi|30047751|gb|AAH50504.1| Cnot6 protein, partial [Danio rerio]
Length = 566
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDK----SNDFTHSFKLASAYSEDIMPYT 56
V+E+LSTG V H+DFK+L Y L N K S TH FKL SAY +MPYT
Sbjct: 430 VVEYLSTGGVDGAHKDFKELRYIDSLTNFNCNGKNGTSSTRITHGFKLKSAYENGLMPYT 489
Query: 57 NYTY 60
NYT+
Sbjct: 490 NYTF 493
>gi|47086721|ref|NP_997825.1| CCR4-NOT transcription complex, subunit 6 [Danio rerio]
gi|37194691|gb|AAH58309.1| CCR4-NOT transcription complex, subunit 6 [Danio rerio]
Length = 557
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDK----SNDFTHSFKLASAYSEDIMPYT 56
V+E+LSTG V H+DFK+L Y L N K S TH FKL SAY +MPYT
Sbjct: 421 VVEYLSTGGVDGAHKDFKELRYIDSLTNFNCNGKNGTSSTRITHGFKLKSAYENGLMPYT 480
Query: 57 NYTY 60
NYT+
Sbjct: 481 NYTF 484
>gi|16554263|dbj|BAB71707.1| unnamed protein product [Homo sapiens]
Length = 475
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 392 VVEYLSNGGVADNHKDFKELGYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 451
Query: 57 NYTY 60
NYT+
Sbjct: 452 NYTF 455
>gi|158517963|ref|NP_001103498.1| uncharacterized protein LOC560386 [Danio rerio]
gi|157422796|gb|AAI53318.1| Zgc:171797 protein [Danio rerio]
Length = 558
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 43/64 (67%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYK-SVLNKIC--QNDKSND-FTHSFKLASAYSEDIMPYT 56
V+E+LSTG V H+DFK+L Y S+ N C +N SN TH+FKL SAY +MPYT
Sbjct: 422 VVEYLSTGGVDCTHKDFKELRYSDSLTNFNCNGKNSTSNGRITHAFKLKSAYENGLMPYT 481
Query: 57 NYTY 60
NYT+
Sbjct: 482 NYTF 485
>gi|6453600|emb|CAB61415.1| hypothetical protein [Homo sapiens]
Length = 348
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 212 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 271
Query: 57 NYTY 60
NYT+
Sbjct: 272 NYTF 275
>gi|119626224|gb|EAX05819.1| CCR4-NOT transcription complex, subunit 6-like, isoform CRA_b [Homo
sapiens]
Length = 475
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 392 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 451
Query: 57 NYTY 60
NYT+
Sbjct: 452 NYTF 455
>gi|426344763|ref|XP_004038925.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like [Gorilla
gorilla gorilla]
Length = 571
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 435 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 494
Query: 57 NYTY 60
NYT+
Sbjct: 495 NYTF 498
>gi|444723279|gb|ELW63938.1| CCR4-NOT transcription complex subunit 6-like protein [Tupaia
chinensis]
Length = 591
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 414 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 473
Query: 57 NYTY 60
NYT+
Sbjct: 474 NYTF 477
>gi|311262408|ref|XP_003129169.1| PREDICTED: CCR4-NOT transcription complex, subunit 6-like [Sus
scrofa]
Length = 552
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 416 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 475
Query: 57 NYTY 60
NYT+
Sbjct: 476 NYTF 479
>gi|403263788|ref|XP_003924195.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like [Saimiri
boliviensis boliviensis]
Length = 592
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 456 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 515
Query: 57 NYTY 60
NYT+
Sbjct: 516 NYTF 519
>gi|351701274|gb|EHB04193.1| CCR4-NOT transcription complex subunit 6-like protein
[Heterocephalus glaber]
Length = 558
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 422 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 481
Query: 57 NYTY 60
NYT+
Sbjct: 482 NYTF 485
>gi|194382600|dbj|BAG64470.1| unnamed protein product [Homo sapiens]
Length = 555
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 419 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 478
Query: 57 NYTY 60
NYT+
Sbjct: 479 NYTF 482
>gi|380799581|gb|AFE71666.1| CCR4-NOT transcription complex subunit 6-like, partial [Macaca
mulatta]
Length = 524
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 388 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 447
Query: 57 NYTY 60
NYT+
Sbjct: 448 NYTF 451
>gi|345795630|ref|XP_544939.2| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex,
subunit 6-like isoform 1 [Canis lupus familiaris]
Length = 562
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 426 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 485
Query: 57 NYTY 60
NYT+
Sbjct: 486 NYTF 489
>gi|355687314|gb|EHH25898.1| CCR4-NOT transcription complex subunit 6-like protein, partial
[Macaca mulatta]
gi|355749290|gb|EHH53689.1| CCR4-NOT transcription complex subunit 6-like protein, partial
[Macaca fascicularis]
gi|440910583|gb|ELR60368.1| CCR4-NOT transcription complex subunit 6-like protein, partial [Bos
grunniens mutus]
Length = 554
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 418 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 477
Query: 57 NYTY 60
NYT+
Sbjct: 478 NYTF 481
>gi|301598724|pdb|3NGQ|A Chain A, Crystal Structure Of The Human Cnot6l Nuclease Domain
Length = 398
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 262 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 321
Query: 57 NYTY 60
NYT+
Sbjct: 322 NYTF 325
>gi|344284859|ref|XP_003414182.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like [Loxodonta
africana]
Length = 559
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 423 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 482
Query: 57 NYTY 60
NYT+
Sbjct: 483 NYTF 486
>gi|301598721|pdb|3NGN|A Chain A, Crystal Structure Of The Human Cnot6l Nuclease Domain In
Complex With Amp
gi|301598722|pdb|3NGO|A Chain A, Crystal Structure Of The Human Cnot6l Nuclease Domain In
Complex With Poly(A) Dna
Length = 398
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 262 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 321
Query: 57 NYTY 60
NYT+
Sbjct: 322 NYTF 325
>gi|359066549|ref|XP_003586261.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like [Bos
taurus]
gi|296486473|tpg|DAA28586.1| TPA: CCR4-NOT transcription complex, subunit 6-like [Bos taurus]
Length = 440
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 304 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 363
Query: 57 NYTY 60
NYT+
Sbjct: 364 NYTF 367
>gi|115583679|ref|NP_653172.2| CCR4-NOT transcription complex subunit 6-like [Homo sapiens]
gi|300796270|ref|NP_001178452.1| CCR4-NOT transcription complex subunit 6-like [Bos taurus]
gi|386782053|ref|NP_001248222.1| CCR4-NOT transcription complex subunit 6-like [Macaca mulatta]
gi|332233294|ref|XP_003265839.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like isoform 1
[Nomascus leucogenys]
gi|332233296|ref|XP_003265840.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like isoform 2
[Nomascus leucogenys]
gi|332819466|ref|XP_003310375.1| PREDICTED: CCR4-NOT transcription complex, subunit 6-like isoform 1
[Pan troglodytes]
gi|332819468|ref|XP_523084.3| PREDICTED: CCR4-NOT transcription complex, subunit 6-like isoform 2
[Pan troglodytes]
gi|338723474|ref|XP_003364735.1| PREDICTED: CCR4-NOT transcription complex, subunit 6-like isoform 2
[Equus caballus]
gi|402869444|ref|XP_003898770.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like isoform 1
[Papio anubis]
gi|402869446|ref|XP_003898771.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like isoform 2
[Papio anubis]
gi|426231912|ref|XP_004009981.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like [Ovis
aries]
gi|166216089|sp|Q96LI5.2|CNO6L_HUMAN RecName: Full=CCR4-NOT transcription complex subunit 6-like;
AltName: Full=Carbon catabolite repressor protein 4
homolog B
gi|157170238|gb|AAI52817.1| CCR4-NOT transcription complex, subunit 6-like [synthetic
construct]
gi|383408297|gb|AFH27362.1| CCR4-NOT transcription complex subunit 6-like [Macaca mulatta]
gi|410209272|gb|JAA01855.1| CCR4-NOT transcription complex, subunit 6-like [Pan troglodytes]
gi|410305470|gb|JAA31335.1| CCR4-NOT transcription complex, subunit 6-like [Pan troglodytes]
Length = 555
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 419 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 478
Query: 57 NYTY 60
NYT+
Sbjct: 479 NYTF 482
>gi|432114098|gb|ELK36143.1| CCR4-NOT transcription complex subunit 6-like protein [Myotis
davidii]
Length = 551
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 415 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 474
Query: 57 NYTY 60
NYT+
Sbjct: 475 NYTF 478
>gi|417411593|gb|JAA52227.1| Putative ccr4-not transcription complex subunit 6-like isoform 2,
partial [Desmodus rotundus]
Length = 554
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 418 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 477
Query: 57 NYTY 60
NYT+
Sbjct: 478 NYTF 481
>gi|119626223|gb|EAX05818.1| CCR4-NOT transcription complex, subunit 6-like, isoform CRA_a [Homo
sapiens]
Length = 528
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 392 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 451
Query: 57 NYTY 60
NYT+
Sbjct: 452 NYTF 455
>gi|431916177|gb|ELK16429.1| CCR4-NOT transcription complex subunit 6-like protein [Pteropus
alecto]
Length = 549
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 413 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 472
Query: 57 NYTY 60
NYT+
Sbjct: 473 NYTF 476
>gi|410957386|ref|XP_003985308.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like [Felis
catus]
Length = 555
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 419 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 478
Query: 57 NYTY 60
NYT+
Sbjct: 479 NYTF 482
>gi|291401570|ref|XP_002717141.1| PREDICTED: CCR4-NOT transcription complex, subunit 6-like isoform 1
[Oryctolagus cuniculus]
Length = 555
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 419 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 478
Query: 57 NYTY 60
NYT+
Sbjct: 479 NYTF 482
>gi|281346828|gb|EFB22412.1| hypothetical protein PANDA_000289 [Ailuropoda melanoleuca]
Length = 554
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 418 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 477
Query: 57 NYTY 60
NYT+
Sbjct: 478 NYTF 481
>gi|194209043|ref|XP_001491851.2| PREDICTED: CCR4-NOT transcription complex, subunit 6-like isoform 1
[Equus caballus]
Length = 563
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 427 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 486
Query: 57 NYTY 60
NYT+
Sbjct: 487 NYTF 490
>gi|296196223|ref|XP_002745726.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like
[Callithrix jacchus]
Length = 555
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 419 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 478
Query: 57 NYTY 60
NYT+
Sbjct: 479 NYTF 482
>gi|291401572|ref|XP_002717142.1| PREDICTED: CCR4-NOT transcription complex, subunit 6-like isoform 2
[Oryctolagus cuniculus]
Length = 556
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 420 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 479
Query: 57 NYTY 60
NYT+
Sbjct: 480 NYTF 483
>gi|397524712|ref|XP_003846193.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex
subunit 6-like [Pan paniscus]
Length = 555
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 419 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 478
Query: 57 NYTY 60
NYT+
Sbjct: 479 NYTF 482
>gi|355680038|gb|AER96465.1| CCR4-NOT transcription complex, subunit 6-like protein [Mustela
putorius furo]
Length = 549
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 414 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYT 473
Query: 57 NYTY 60
NYT+
Sbjct: 474 NYTF 477
>gi|449280583|gb|EMC87851.1| CCR4-NOT transcription complex subunit 6-like protein [Columba
livia]
Length = 550
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 414 VVEYLSNGIVADNHKDFKELRYNECLMNFSGNGKNGASEGRITHGFQLKSAYENNLMPYT 473
Query: 57 NYTY 60
NYT+
Sbjct: 474 NYTF 477
>gi|449499431|ref|XP_002195833.2| PREDICTED: CCR4-NOT transcription complex, subunit 6-like-like
[Taeniopygia guttata]
Length = 549
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 413 VVEYLSNGIVADNHKDFKELRYNECLMNFSGNGKNGASEGRITHGFQLKSAYENNLMPYT 472
Query: 57 NYTY 60
NYT+
Sbjct: 473 NYTF 476
>gi|345327972|ref|XP_001506990.2| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex,
subunit 6-like [Ornithorhynchus anatinus]
Length = 563
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 427 VVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGTSEGRITHGFQLKSAYENNLMPYT 486
Query: 57 NYTY 60
NYT+
Sbjct: 487 NYTF 490
>gi|224050382|ref|XP_002189618.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like, partial
[Taeniopygia guttata]
Length = 212
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 76 VVEYLSNGIVADNHKDFKELRYNECLMNFSGNGKNGASEGRITHGFQLKSAYENNLMPYT 135
Query: 57 NYTY 60
NYT+
Sbjct: 136 NYTF 139
>gi|187607282|ref|NP_001120421.1| CCR4-NOT transcription complex, subunit 6-like [Xenopus (Silurana)
tropicalis]
gi|170285250|gb|AAI61170.1| LOC100145505 protein [Xenopus (Silurana) tropicalis]
Length = 523
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+L+ G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 414 VVEYLTNGGVADNHKDFKELRYNECLTNFSCNGKNGTPDGRITHGFQLRSAYENNLMPYT 473
Query: 57 NYTY 60
NYT+
Sbjct: 474 NYTF 477
>gi|148237113|ref|NP_001088222.1| CCR4-NOT transcription complex subunit 6-like-B [Xenopus laevis]
gi|82180429|sp|Q5XH73.1|CN6LB_XENLA RecName: Full=CCR4-NOT transcription complex subunit 6-like-B
gi|54038197|gb|AAH84200.1| LOC495050 protein [Xenopus laevis]
Length = 550
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+L+ G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 414 VVEYLTNGGVADNHKDFKELRYNECLTNFSCNGKNGTPDGRITHGFQLRSAYENNLMPYT 473
Query: 57 NYTY 60
NYT+
Sbjct: 474 NYTF 477
>gi|354504655|ref|XP_003514389.1| PREDICTED: CCR4-NOT transcription complex subunit 6 [Cricetulus
griseus]
Length = 587
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L + K+ TH F+L SAY ++MPYT
Sbjct: 451 VVEYLSNGGVADNHKDFKELRYNECLMNFSCSGKNGSSEGRITHGFQLKSAYENNLMPYT 510
Query: 57 NYTY 60
NYT+
Sbjct: 511 NYTF 514
>gi|334330941|ref|XP_001362576.2| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex
subunit 6-like [Monodelphis domestica]
Length = 555
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPY-KSVLNKICQNDKS---NDFTHSFKLASAYSEDIMPYT 56
V+E+LS+G V +H+DFK+L Y + ++N C TH F+L SAY ++MPYT
Sbjct: 419 VVEYLSSGGVADNHKDFKELRYNECLMNFSCSGKNGTSEGRITHGFQLQSAYENNLMPYT 478
Query: 57 NYTY 60
NYT+
Sbjct: 479 NYTF 482
>gi|395542018|ref|XP_003772932.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like
[Sarcophilus harrisii]
Length = 551
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPY-KSVLNKICQNDKS---NDFTHSFKLASAYSEDIMPYT 56
V+E+LS+G V +H+DFK+L Y + ++N C TH F+L SAY ++MPYT
Sbjct: 415 VVEYLSSGGVADNHKDFKELRYNECLMNFSCSGKNGTSEGRITHGFQLQSAYENNLMPYT 474
Query: 57 NYTY 60
NYT+
Sbjct: 475 NYTF 478
>gi|148238052|ref|NP_001085037.1| CCR4-NOT transcription complex subunit 6-like-A [Xenopus laevis]
gi|82185098|sp|Q6IR85.1|CN6LA_XENLA RecName: Full=CCR4-NOT transcription complex subunit 6-like-A
gi|47506928|gb|AAH71015.1| MGC81488 protein [Xenopus laevis]
Length = 550
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+L+ G V +H+DFK+L Y L N K+ TH F+L SAY ++MPYT
Sbjct: 414 VVEYLTNGGVADNHKDFKELRYNECLTNFNCNGKNGTPDGRITHGFQLRSAYENNLMPYT 473
Query: 57 NYTY 60
NYT+
Sbjct: 474 NYTF 477
>gi|148688416|gb|EDL20363.1| CCR4-NOT transcription complex, subunit 6-like, isoform CRA_b [Mus
musculus]
Length = 542
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L + K+ TH F+L SAY ++MPYT
Sbjct: 406 VVEYLSNGGVADNHKDFKELRYNECLMNFSCSGKNGSSEGRITHGFQLKSAYENNLMPYT 465
Query: 57 NYTY 60
NYT+
Sbjct: 466 NYTF 469
>gi|387015064|gb|AFJ49651.1| CCR4-NOT transcription complex subunit 6-like [Crotalus adamanteus]
Length = 550
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L + K+ TH F+L SAY ++MPYT
Sbjct: 414 VVEYLSNGIVADNHKDFKELRYNECLMNFTGSGKTGASEGRITHGFQLKSAYENNLMPYT 473
Query: 57 NYTY 60
NYT+
Sbjct: 474 NYTF 477
>gi|344252857|gb|EGW08961.1| CCR4-NOT transcription complex subunit 6-like [Cricetulus griseus]
Length = 431
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L + K+ TH F+L SAY ++MPYT
Sbjct: 295 VVEYLSNGGVADNHKDFKELRYNECLMNFSCSGKNGSSEGRITHGFQLKSAYENNLMPYT 354
Query: 57 NYTY 60
NYT+
Sbjct: 355 NYTF 358
>gi|148688415|gb|EDL20362.1| CCR4-NOT transcription complex, subunit 6-like, isoform CRA_a [Mus
musculus]
Length = 568
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L + K+ TH F+L SAY ++MPYT
Sbjct: 432 VVEYLSNGGVADNHKDFKELRYNECLMNFSCSGKNGSSEGRITHGFQLKSAYENNLMPYT 491
Query: 57 NYTY 60
NYT+
Sbjct: 492 NYTF 495
>gi|121674807|ref|NP_849185.2| CCR4-NOT transcription complex subunit 6-like isoform 2 [Mus
musculus]
gi|166216090|sp|Q8VEG6.2|CNO6L_MOUSE RecName: Full=CCR4-NOT transcription complex subunit 6-like
Length = 555
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L + K+ TH F+L SAY ++MPYT
Sbjct: 419 VVEYLSNGGVADNHKDFKELRYNECLMNFSCSGKNGSSEGRITHGFQLKSAYENNLMPYT 478
Query: 57 NYTY 60
NYT+
Sbjct: 479 NYTF 482
>gi|26326093|dbj|BAC26790.1| unnamed protein product [Mus musculus]
Length = 492
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L + K+ TH F+L SAY ++MPYT
Sbjct: 356 VVEYLSNGGVADNHKDFKELRYNECLMNFSCSGKNGSSEGRITHGFQLKSAYENNLMPYT 415
Query: 57 NYTY 60
NYT+
Sbjct: 416 NYTF 419
>gi|21450299|ref|NP_659159.1| CCR4-NOT transcription complex subunit 6-like isoform 1 [Mus
musculus]
gi|157823321|ref|NP_001101825.1| CCR4-NOT transcription complex subunit 6-like [Rattus norvegicus]
gi|17391192|gb|AAH18506.1| CCR4-NOT transcription complex, subunit 6-like [Mus musculus]
gi|148688417|gb|EDL20364.1| CCR4-NOT transcription complex, subunit 6-like, isoform CRA_c [Mus
musculus]
gi|149046868|gb|EDL99642.1| CCR4-NOT transcription complex, subunit 6-like (predicted) [Rattus
norvegicus]
Length = 550
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L + K+ TH F+L SAY ++MPYT
Sbjct: 414 VVEYLSNGGVADNHKDFKELRYNECLMNFSCSGKNGSSEGRITHGFQLKSAYENNLMPYT 473
Query: 57 NYTY 60
NYT+
Sbjct: 474 NYTF 477
>gi|326918484|ref|XP_003205518.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like [Meleagris
gallopavo]
gi|363733146|ref|XP_420472.3| PREDICTED: CCR4-NOT transcription complex, subunit 6-like isoform 2
[Gallus gallus]
Length = 549
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN----DFTHSFKLASAYSEDIMPYT 56
V+E+LS G V +H+DFK+L Y L + K+ TH F+L SAY ++MPYT
Sbjct: 413 VVEYLSNGIVADNHKDFKELRYNECLMNFSGSGKNGASEGRITHGFQLKSAYENNLMPYT 472
Query: 57 NYTY 60
NYT+
Sbjct: 473 NYTF 476
>gi|426379185|ref|XP_004056283.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like [Gorilla
gorilla gorilla]
Length = 459
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSND----FTHSFKLASAYSEDIMPYT 56
V+E LS G + +H+DFK+L Y L N K+ TH F+L +AY ++MPYT
Sbjct: 323 VVEHLSNGGIADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKNAYENNLMPYT 382
Query: 57 NYTY 60
NYT+
Sbjct: 383 NYTF 386
>gi|339237993|ref|XP_003380551.1| glucose-repressible alcohol dehydrogenase transcriptional effector
[Trichinella spiralis]
gi|316976544|gb|EFV59821.1| glucose-repressible alcohol dehydrogenase transcriptional effector
[Trichinella spiralis]
Length = 513
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYT 59
V EFL+TG++ DH DFKD + L K+ +N++ H KL +AY ++ +TN+T
Sbjct: 370 VYEFLATGKIACDHPDFKDFRGTTCLQKLSSTKDTNNYAHQMKLETAYDSSMISFTNFT 428
>gi|444726332|gb|ELW66869.1| CCR4-NOT transcription complex subunit 6 [Tupaia chinensis]
Length = 498
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDK----SNDFTHSFKLASAYSEDIMPY 55
V+E+LSTG V ++H+DFK+L Y L N + + TH FKL SAY +MPY
Sbjct: 315 VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGRNGTATGRLTHGFKLKSAYEGGLMPY 373
>gi|156351269|ref|XP_001622436.1| hypothetical protein NEMVEDRAFT_v1g195293 [Nematostella vectensis]
gi|156208975|gb|EDO30336.1| predicted protein [Nematostella vectensis]
Length = 552
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKIC-----QNDKSNDFTHSFKLASAYSED-IMP 54
VIEFL GR+ DH DF+++ Y+ L+++ D S + TH +L AY D +P
Sbjct: 413 VIEFLDNGRIPIDHCDFQEMQYQGFLSRLSNGSSKNGDTSGELTHGLRLKKAYDGDHQLP 472
Query: 55 YTNYTY 60
++N TY
Sbjct: 473 FSNLTY 478
>gi|390332318|ref|XP_779942.3| PREDICTED: CCR4-NOT transcription complex subunit 6 isoform 1
[Strongylocentrotus purpuratus]
Length = 603
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
V+E+L +V+ H DFKDL YK + N ++ + +HSF+L Y + M +TNYTY
Sbjct: 462 VVEYLEMSKVSVRHPDFKDLNYKVLRNFSSNSETNGHISHSFQLKRVYQNNPMRFTNYTY 521
>gi|196011674|ref|XP_002115700.1| hypothetical protein TRIADDRAFT_30062 [Trichoplax adhaerens]
gi|190581476|gb|EDV21552.1| hypothetical protein TRIADDRAFT_30062 [Trichoplax adhaerens]
Length = 538
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQN-DKSNDFTHSFKLASAYSEDIMPYTNYT 59
V+E L++G V+ H DFK Y N C + N+ FKLA A ++D +PYTN T
Sbjct: 417 VVEMLTSGNVSVKHPDFKGKSYDGYFNNSCNILTRENNLVLPFKLAHAANQDFLPYTNMT 476
Query: 60 Y 60
Y
Sbjct: 477 Y 477
>gi|402586232|gb|EJW80170.1| hypothetical protein WUBG_08921, partial [Wuchereria bancrofti]
Length = 525
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60
V+EFLS G ++ +H D K+ + + +D +TH +L A + MP+TNYT
Sbjct: 454 VVEFLSKGAISREHPDLKEFRQDPCITRFSASDDPTVYTHGLRLDCAVDPNSMPFTNYTL 513
Query: 61 V 61
V
Sbjct: 514 V 514
>gi|324499909|gb|ADY39972.1| CCR4-NOT transcription complex subunit 6-like protein [Ascaris
suum]
Length = 610
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYT 59
V EFLS G + DH D K L ++ D +TH+ +L SA + +P+TNYT
Sbjct: 467 VFEFLSKGAIAKDHPDLKGFRDDPCLTRLSATDDPKVYTHALRLDSAVDVNALPFTNYT 525
>gi|221102296|ref|XP_002154797.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like [Hydra
magnipapillata]
Length = 516
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN--DFTHSFKLASAYSEDIMPYTNY 58
IEFL GR+ H DF+ L Y L++ DK TH F L+ A ++ +P+TN+
Sbjct: 395 AIEFLEHGRIPVSHPDFQKLKYGGYLSRYADKDKKGLEIITHPFNLSRAGKKNPLPFTNF 454
Query: 59 TY 60
TY
Sbjct: 455 TY 456
>gi|393907942|gb|EFO26435.2| CCR4-NOT transcription complex subunit 6 family protein [Loa loa]
Length = 601
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYT 59
V+EFLS G ++ +H D K+ + + +D +TH+ +L A + MP+TNYT
Sbjct: 458 VVEFLSKGAISREHPDLKEFRQDPCITRFSASDDPTVYTHALRLDCAVDPNSMPFTNYT 516
>gi|312069344|ref|XP_003137638.1| CCR4-NOT transcription complex subunit 6 family protein [Loa loa]
Length = 590
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYT 59
V+EFLS G ++ +H D K+ + + +D +TH+ +L A + MP+TNYT
Sbjct: 447 VVEFLSKGAISREHPDLKEFRQDPCITRFSASDDPTVYTHALRLDCAVDPNSMPFTNYT 505
>gi|170588391|ref|XP_001898957.1| CCR4 [Brugia malayi]
gi|158593170|gb|EDP31765.1| CCR4, putative [Brugia malayi]
Length = 625
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYT 59
V+EFLS G ++ +H D K+ + + +D +TH +L A + MP+TNYT
Sbjct: 482 VVEFLSKGAISREHPDLKEFRQDPCITRFSASDDPTVYTHGLRLDCAVDPNSMPFTNYT 540
>gi|312371109|gb|EFR19370.1| hypothetical protein AND_22625 [Anopheles darlingi]
Length = 533
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/29 (72%), Positives = 24/29 (82%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKI 29
VIEFLS GRV+ DHQDFK+L YKS L +I
Sbjct: 393 VIEFLSAGRVSMDHQDFKELGYKSCLQRI 421
>gi|170037903|ref|XP_001846794.1| carbon catabolite repressor protein [Culex quinquefasciatus]
gi|167881236|gb|EDS44619.1| carbon catabolite repressor protein [Culex quinquefasciatus]
Length = 409
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/29 (72%), Positives = 24/29 (82%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKI 29
VIEFLS GRV+ DHQDFK+L YKS L +I
Sbjct: 316 VIEFLSAGRVSMDHQDFKELGYKSCLQRI 344
>gi|402593324|gb|EJW87251.1| hypothetical protein WUBG_01840, partial [Wuchereria bancrofti]
Length = 144
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYT 59
V+EFLS G ++ +H D K+ + + +D +TH +L A + MP+TNYT
Sbjct: 1 VVEFLSKGAISREHPDLKEFRQDPCITRFSASDDPTVYTHGLRLDCAVDPNSMPFTNYT 59
>gi|198417059|ref|XP_002129216.1| PREDICTED: similar to CCR4-NOT transcription complex, subunit 6
[Ciona intestinalis]
Length = 659
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSN-------DFTHSFKLASAYSED-- 51
V+EFL G+V+S H DFK++ Y L+ +SN TH F+L S Y +
Sbjct: 421 VVEFLRNGKVSSTHCDFKEIKYSKCLSTFGLGLRSNGTMQDPKSVTHPFRLNSCYDDTNF 480
Query: 52 -IMPYTNYTY 60
++ Y+N TY
Sbjct: 481 HLLQYSNNTY 490
>gi|328773337|gb|EGF83374.1| hypothetical protein BATDEDRAFT_9186 [Batrachochytrium
dendrobatidis JAM81]
Length = 580
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 9/60 (15%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSE-DIMPYTNYT 59
V+EFLS G V++DH D K Y+ N TH L SAYS D+M +TN+T
Sbjct: 460 VVEFLSQGHVSADHDDIKAFNYEPYSN--------GGLTHKLSLKSAYSHVDVMDFTNFT 511
>gi|25150706|ref|NP_502355.2| Protein CCR-4, isoform a [Caenorhabditis elegans]
gi|21654883|gb|AAK85706.1| CCR4 [Caenorhabditis elegans]
gi|22859086|emb|CAB54511.2| Protein CCR-4, isoform a [Caenorhabditis elegans]
Length = 606
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYT 59
V E+LS G++T H D K S L K + N +H +L SA + +P+TNYT
Sbjct: 453 VFEYLSKGQITRRHMDLKSFRDDSCLEKFTNSTDKNVISHPLRLDSACDINSIPFTNYT 511
>gi|71999722|ref|NP_001023607.1| Protein CCR-4, isoform b [Caenorhabditis elegans]
gi|22859087|emb|CAB54512.2| Protein CCR-4, isoform b [Caenorhabditis elegans]
Length = 613
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYT 59
V E+LS G++T H D K S L K + N +H +L SA + +P+TNYT
Sbjct: 460 VFEYLSKGQITRRHMDLKSFRDDSCLEKFTNSTDKNVISHPLRLDSACDINSIPFTNYT 518
>gi|71999724|ref|NP_001023608.1| Protein CCR-4, isoform c [Caenorhabditis elegans]
gi|22859088|emb|CAD45610.1| Protein CCR-4, isoform c [Caenorhabditis elegans]
Length = 597
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYT 59
V E+LS G++T H D K S L K + N +H +L SA + +P+TNYT
Sbjct: 444 VFEYLSKGQITRRHMDLKSFRDDSCLEKFTNSTDKNVISHPLRLDSACDINSIPFTNYT 502
>gi|268537020|ref|XP_002633646.1| C. briggsae CBR-CCR-4 protein [Caenorhabditis briggsae]
Length = 781
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYT 59
V E+LS G++T H D K S L K + N +H +L SA +P+TNYT
Sbjct: 637 VFEYLSKGQITRRHLDLKSFREDSCLEKFTNSSDKNVISHPLRLDSACDLQSIPFTNYT 695
>gi|25396127|pir||A88860 protein ZC518.3 [imported] - Caenorhabditis elegans
Length = 828
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYT 59
V E+LS G++T H D K S L K + N +H +L SA + +P+TNYT
Sbjct: 675 VFEYLSKGQITRRHMDLKSFRDDSCLEKFTNSTDKNVISHPLRLDSACDINSIPFTNYT 733
>gi|358054675|dbj|GAA99601.1| hypothetical protein E5Q_06302 [Mixia osmundae IAM 14324]
Length = 796
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 10/61 (16%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYS--EDIMPYTNY 58
V FL+ G V DH DFK + I N S+ H F L SAYS ++++P+TNY
Sbjct: 675 VYHFLANGAVGRDHPDFK--------SHIYGNYTSDGLAHRFNLRSAYSHGDELLPFTNY 726
Query: 59 T 59
T
Sbjct: 727 T 727
>gi|212659363|ref|NP_001129877.1| Protein CCR-4, isoform d [Caenorhabditis elegans]
gi|189310653|emb|CAQ58128.1| Protein CCR-4, isoform d [Caenorhabditis elegans]
Length = 677
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYT 59
V E+LS G++T H D K S L K + N +H +L SA + +P+TNYT
Sbjct: 524 VFEYLSKGQITRRHMDLKSFRDDSCLEKFTNSTDKNVISHPLRLDSACDINSIPFTNYT 582
>gi|340376662|ref|XP_003386851.1| PREDICTED: CCR4-NOT transcription complex subunit 6-like
[Amphimedon queenslandica]
Length = 483
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKS-------NDFTHSFKLASAYSEDIM 53
V+E+ + GRV +DH DF + Y ++ + + H F + YS + M
Sbjct: 356 VLEYFTKGRVPTDHPDFLEYNYDRFFESTIRSTSTVRSPTGKPELRHPFNIKRCYSNEHM 415
Query: 54 PYTNYTY 60
Y+NYTY
Sbjct: 416 TYSNYTY 422
>gi|341884125|gb|EGT40060.1| hypothetical protein CAEBREN_19479 [Caenorhabditis brenneri]
Length = 593
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYT 59
V E+LS G++T H D K + L K + N +H +L SA +P+TNYT
Sbjct: 441 VFEYLSKGQITRRHMDLKTFREDTCLEKFSSSTDKNILSHPLRLDSACDLTSIPFTNYT 499
>gi|341890690|gb|EGT46625.1| hypothetical protein CAEBREN_14944 [Caenorhabditis brenneri]
Length = 597
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYT 59
V E+LS G++T H D K + L K + N +H +L SA +P+TNYT
Sbjct: 445 VFEYLSKGQITRRHMDLKTFREDTCLEKFSSSTDKNILSHPLRLDSACDLTSIPFTNYT 503
>gi|393217723|gb|EJD03212.1| glucose-repressible alcohol dehydrogenase transcriptional effector
[Fomitiporia mediterranea MF3/22]
Length = 618
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSE-DIMPYTNYT 59
V EFLS G V SDH DF L++I N S H L SAYS +P TNYT
Sbjct: 490 VYEFLSNGTVPSDHPDF--------LSRIYGNYTSEGLRHRLGLRSAYSGIGELPMTNYT 541
>gi|346326650|gb|EGX96246.1| Endonuclease/exonuclease/phosphatase [Cordyceps militaris CM01]
Length = 797
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 13/64 (20%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAY-----SEDIMPY 55
V E +S GRV+ DH + +D Y S S+ H F L +Y + D MP+
Sbjct: 664 VFELMSKGRVSPDHPELRDHQYGSY--------TSDGIEHPFSLRDSYAATRGTADEMPF 715
Query: 56 TNYT 59
TNYT
Sbjct: 716 TNYT 719
>gi|326433914|gb|EGD79484.1| hypothetical protein PTSG_12983 [Salpingoeca sp. ATCC 50818]
Length = 504
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 8/59 (13%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYT 59
V EFL+TG++ +H D + YK+ + + TH FKL SAY+ + M YTN T
Sbjct: 397 VYEFLATGKINPNHPDMQGYDYKAFFDSV-------GTTHPFKLRSAYTTE-MQYTNKT 447
>gi|308477169|ref|XP_003100799.1| CRE-CCR-4 protein [Caenorhabditis remanei]
gi|308264611|gb|EFP08564.1| CRE-CCR-4 protein [Caenorhabditis remanei]
Length = 672
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYT 59
V E+LS G+++ H DFK + L + N +H +L SA +P+TNYT
Sbjct: 519 VFEYLSKGQISRSHADFKSFRDDTCLEMFSNSTDKNVISHPLRLDSACDITSIPFTNYT 577
>gi|380487638|emb|CCF37913.1| pfs domain-containing protein [Colletotrichum higginsianum]
Length = 893
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 13/64 (20%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSE-----DIMPY 55
V E LS GRV +HQ+ Y S + H F L AY+ D MP+
Sbjct: 70 VYELLSMGRVPPNHQELSSFQYGSF--------TRDGIEHPFSLRDAYAHIKNTPDEMPF 121
Query: 56 TNYT 59
TNYT
Sbjct: 122 TNYT 125
>gi|71018093|ref|XP_759277.1| hypothetical protein UM03130.1 [Ustilago maydis 521]
gi|74702006|sp|Q4P9T3.1|CCR4_USTMA RecName: Full=Glucose-repressible alcohol dehydrogenase
transcriptional effector; AltName: Full=Carbon
catabolite repressor protein 4; AltName:
Full=Cytoplasmic deadenylase
gi|46099127|gb|EAK84360.1| hypothetical protein UM03130.1 [Ustilago maydis 521]
Length = 670
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 9/60 (15%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSE-DIMPYTNYT 59
V +FL+ G V DH+DF D Y N + HS+KL S+Y +P+TNYT
Sbjct: 534 VYDFLANGAVPGDHEDFMDHVYG--------NYTAQGLQHSYKLESSYVPIGELPFTNYT 585
>gi|313228884|emb|CBY18036.1| unnamed protein product [Oikopleura dioica]
Length = 515
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLAS---AYSEDIMPYTN 57
V EF+ G+V +H +F+ Y L K+ N K+ + F+ +Y ++MP+TN
Sbjct: 395 VTEFVKEGKVELNHPEFQRFNYNKKLVKM--NPKNGEVFWQFRFCFNLFSYLPELMPFTN 452
Query: 58 YTY 60
YTY
Sbjct: 453 YTY 455
>gi|380494027|emb|CCF33451.1| endonuclease/Exonuclease/phosphatase, partial [Colletotrichum
higginsianum]
Length = 784
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 13/64 (20%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSE-----DIMPY 55
V E LS GRV +HQ+ Y S + H F L AY+ D MP+
Sbjct: 635 VYELLSMGRVPPNHQELSSFQYGSF--------TRDGIEHPFSLRDAYAHIKNTPDEMPF 686
Query: 56 TNYT 59
TNYT
Sbjct: 687 TNYT 690
>gi|310790455|gb|EFQ25988.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola
M1.001]
Length = 768
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 13/64 (20%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSE-----DIMPY 55
V E LS GRV +HQ+ Y S + H F L AY+ D MP+
Sbjct: 634 VYELLSMGRVPPNHQELSSFQYGSF--------TRDGIEHPFSLRDAYAHIKNTPDEMPF 685
Query: 56 TNYT 59
TNYT
Sbjct: 686 TNYT 689
>gi|302404854|ref|XP_003000264.1| glucose-repressible alcohol dehydrogenase transcriptional effector
[Verticillium albo-atrum VaMs.102]
gi|261360921|gb|EEY23349.1| glucose-repressible alcohol dehydrogenase transcriptional effector
[Verticillium albo-atrum VaMs.102]
gi|346979804|gb|EGY23256.1| glucose-repressible alcohol dehydrogenase transcriptional effector
[Verticillium dahliae VdLs.17]
Length = 703
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 13/64 (20%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAY-----SEDIMPY 55
V E L+ GRV+ DH++ Y N + H F L AY + D +PY
Sbjct: 568 VYELLAQGRVSPDHKELASFQYG--------NFTRDGIEHPFSLRDAYAPTHGTPDQLPY 619
Query: 56 TNYT 59
TNYT
Sbjct: 620 TNYT 623
>gi|300175117|emb|CBK20428.2| unnamed protein product [Blastocystis hominis]
Length = 404
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDI---MPYTN 57
V EF+S GRV DH D ++ P + + QN H KLAS Y E + +TN
Sbjct: 264 VYEFMSMGRVRGDHPDLQNDPENIIRSIGVQN-----INHKIKLASVYKEVMGSEPKFTN 318
Query: 58 YT 59
YT
Sbjct: 319 YT 320
>gi|46110322|ref|XP_382219.1| hypothetical protein FG02043.1 [Gibberella zeae PH-1]
gi|408395487|gb|EKJ74667.1| hypothetical protein FPSE_05135 [Fusarium pseudograminearum CS3096]
Length = 698
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 13/64 (20%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSE-----DIMPY 55
V E +S GRV DH D Y S + H F L AY+ D MP+
Sbjct: 566 VYELMSMGRVPPDHLDLSSFQYGSF--------TRDGIEHPFSLRDAYAHIKHTADDMPF 617
Query: 56 TNYT 59
TNYT
Sbjct: 618 TNYT 621
>gi|429849078|gb|ELA24493.1| glucose-repressible alcohol dehydrogenase transcriptional effector
[Colletotrichum gloeosporioides Nara gc5]
Length = 765
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 13/64 (20%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSE-----DIMPY 55
V E LSTGRV +H + Y S + H F L AY+ D MP+
Sbjct: 632 VYELLSTGRVPPNHTELSSFQYGSF--------TRDGIDHPFSLRDAYAHLKNTPDEMPF 683
Query: 56 TNYT 59
TNYT
Sbjct: 684 TNYT 687
>gi|302898293|ref|XP_003047818.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256728749|gb|EEU42105.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 700
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 13/64 (20%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSE-----DIMPY 55
V E +S GRV DH + + Y S + H F L AY+ D MP+
Sbjct: 565 VYELMSMGRVPPDHLELSNFQYGSF--------TRDGIEHPFSLRDAYAHTKHTADEMPF 616
Query: 56 TNYT 59
TNYT
Sbjct: 617 TNYT 620
>gi|342885942|gb|EGU85891.1| hypothetical protein FOXB_03558 [Fusarium oxysporum Fo5176]
Length = 699
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 13/64 (20%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSE-----DIMPY 55
V E +S GRV DH + Y S + H F L AY+ D MP+
Sbjct: 567 VYELMSMGRVPPDHLELSSFQYGSF--------TRDGIEHPFSLRDAYAHIKNTADEMPF 618
Query: 56 TNYT 59
TNYT
Sbjct: 619 TNYT 622
>gi|19075401|ref|NP_587901.1| CCR4-Not complex subunit Ccr4 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74582584|sp|O74874.1|CCR4_SCHPO RecName: Full=Glucose-repressible alcohol dehydrogenase
transcriptional effector; AltName: Full=Carbon
catabolite repressor protein 4; AltName:
Full=Cytoplasmic deadenylase
gi|3702632|emb|CAA21225.1| CCR4-Not complex subunit Ccr4 (predicted) [Schizosaccharomyces
pombe]
Length = 690
Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 9/60 (15%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSE-DIMPYTNYT 59
V +FLS+G ++ +H+DF + Y N +H+F L SAY E + + +TNYT
Sbjct: 567 VYDFLSSGSISQNHEDFMNNDYGEY--------TVNGRSHAFNLKSAYGESEALSFTNYT 618
>gi|116198421|ref|XP_001225022.1| hypothetical protein CHGG_07366 [Chaetomium globosum CBS 148.51]
gi|88178645|gb|EAQ86113.1| hypothetical protein CHGG_07366 [Chaetomium globosum CBS 148.51]
Length = 346
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 13/63 (20%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAY-----SEDIMPY 55
V E LS GRV +H DF D Y S + H F + SAY + + +P+
Sbjct: 213 VYELLSMGRVAPNHSDFGDHQYGSFTR--------DGIEHPFSMRSAYVHLKGTPEDLPF 264
Query: 56 TNY 58
TNY
Sbjct: 265 TNY 267
>gi|255947092|ref|XP_002564313.1| Pc22g02690 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591330|emb|CAP97557.1| Pc22g02690 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 681
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 9/57 (15%)
Query: 4 FLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSE-DIMPYTNYT 59
+STGR+ DH D + Y + L+K+ TH FKL SAYS + +TNYT
Sbjct: 561 LISTGRLPEDHPDLEKRLYGN-LSKV-------GMTHPFKLKSAYSSMGELSFTNYT 609
>gi|325179666|emb|CCA14064.1| carbon catabolite repressor protein putative [Albugo laibachii
Nc14]
Length = 607
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 12/62 (19%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIM---PYTN 57
V +FLS V SDH+D + P SV N I + H LAS+Y+ YTN
Sbjct: 487 VYQFLSRNHVASDHEDLQ--PLASVFNSI-------EIAHCLALASSYASVFRSEPEYTN 537
Query: 58 YT 59
YT
Sbjct: 538 YT 539
>gi|388854451|emb|CCF51838.1| related to CCR4-transcriptional regulator involved in carbon
catabolite repression [Ustilago hordei]
Length = 785
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSE-DIMPYTNYT 59
V FL+ G V DH+DF D Y N + HS+KL S+Y+ + +TNYT
Sbjct: 653 VYHFLANGAVPGDHEDFMDHVYG--------NYTAQGLQHSYKLESSYAPVGELSFTNYT 704
>gi|409045223|gb|EKM54704.1| hypothetical protein PHACADRAFT_258719 [Phanerochaete carnosa
HHB-10118-sp]
Length = 755
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSE-DIMPYTNYT 59
V EFLS+G + +DH D+ Y + H F L SAYS +P TNYT
Sbjct: 629 VYEFLSSGSLPADHPDWMSFTYGKY--------TRDGLRHRFGLKSAYSAIGELPMTNYT 680
>gi|213405953|ref|XP_002173748.1| CCR4-Not complex subunit Ccr4 [Schizosaccharomyces japonicus
yFS275]
gi|212001795|gb|EEB07455.1| CCR4-Not complex subunit Ccr4 [Schizosaccharomyces japonicus
yFS275]
Length = 653
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 13/62 (20%)
Query: 1 VIEFLSTGRVTSDHQDFKDLPYK--SVLNKICQNDKSNDFTHSFKLASAYSEDI-MPYTN 57
V++FLS+G V H+DF + Y +V + +H+F L SAYS + +P+TN
Sbjct: 531 VLDFLSSGMVERKHEDFMEHDYGDYTVAGR----------SHTFSLKSAYSANNDLPFTN 580
Query: 58 YT 59
+T
Sbjct: 581 FT 582
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 934,004,199
Number of Sequences: 23463169
Number of extensions: 27268142
Number of successful extensions: 56748
Number of sequences better than 100.0: 198
Number of HSP's better than 100.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 56435
Number of HSP's gapped (non-prelim): 198
length of query: 61
length of database: 8,064,228,071
effective HSP length: 33
effective length of query: 28
effective length of database: 7,289,943,494
effective search space: 204118417832
effective search space used: 204118417832
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)