Query psy6945
Match_columns 61
No_of_seqs 107 out of 176
Neff 5.5
Searched_HMMs 13730
Date Fri Aug 16 22:45:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6945.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/6945hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2pwaa1 c.41.1.1 (A:1-279) Pro 25.1 13 0.00092 22.2 1.2 12 10-21 42-53 (279)
2 d2ixta1 c.41.1.1 (A:1-309) Sph 23.7 16 0.0012 21.6 1.5 15 5-20 33-47 (309)
3 d2id4a2 c.41.1.1 (A:122-460) K 18.0 25 0.0018 21.0 1.5 16 5-21 53-68 (339)
4 d1thma_ c.41.1.1 (A:) Thermita 17.0 26 0.0019 20.6 1.4 16 5-21 37-52 (279)
5 d1p8ja2 c.41.1.1 (A:109-442) F 16.5 19 0.0014 21.4 0.6 12 10-21 48-59 (334)
6 d1r0re_ c.41.1.1 (E:) Subtilis 13.8 30 0.0022 20.3 1.0 13 5-18 31-43 (274)
7 d1v6ca_ c.41.1.1 (A:) Alkaline 12.9 32 0.0023 21.6 1.0 12 10-21 33-44 (435)
8 d2h85a1 c.66.1.48 (A:1-190) Ns 11.2 24 0.0017 21.6 -0.0 45 2-60 55-99 (190)
9 d1dbia_ c.41.1.1 (A:) Thermost 10.9 47 0.0035 19.7 1.3 12 10-21 42-53 (280)
10 d2gtia1 c.66.1.48 (A:1-194) Ns 10.8 22 0.0016 21.8 -0.3 45 2-60 55-99 (194)
No 1
>d2pwaa1 c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirachium album), strain limber [TaxId: 37998]}
Probab=25.13 E-value=13 Score=22.24 Aligned_cols=12 Identities=17% Similarity=0.542 Sum_probs=10.0
Q ss_pred CCCCCccccCCC
Q psy6945 10 VTSDHQDFKDLP 21 (61)
Q Consensus 10 V~~~H~Df~~~~ 21 (61)
|..+||||+++.
T Consensus 42 id~~Hpdf~g~~ 53 (279)
T d2pwaa1 42 IEASHPEFEGRA 53 (279)
T ss_dssp CCTTCGGGTTCE
T ss_pred CCCCChhhcCCc
Confidence 778999998754
No 2
>d2ixta1 c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus [TaxId: 1421]}
Probab=23.67 E-value=16 Score=21.57 Aligned_cols=15 Identities=40% Similarity=0.656 Sum_probs=11.4
Q ss_pred cccCCCCCCCccccCC
Q psy6945 5 LSTGRVTSDHQDFKDL 20 (61)
Q Consensus 5 Ls~G~V~~~H~Df~~~ 20 (61)
|.+| |..+||||+++
T Consensus 33 iDsG-v~~~Hp~~~~~ 47 (309)
T d2ixta1 33 LDTG-VNTSHPDLVNN 47 (309)
T ss_dssp EESC-CCTTCTTTTTT
T ss_pred EccC-CCCCChhHhcc
Confidence 4455 78899999865
No 3
>d2id4a2 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=17.97 E-value=25 Score=21.01 Aligned_cols=16 Identities=25% Similarity=0.463 Sum_probs=11.5
Q ss_pred cccCCCCCCCccccCCC
Q psy6945 5 LSTGRVTSDHQDFKDLP 21 (61)
Q Consensus 5 Ls~G~V~~~H~Df~~~~ 21 (61)
|.+| |..+||||+++.
T Consensus 53 iDtG-id~~Hp~l~~~~ 68 (339)
T d2id4a2 53 VDDG-LDYENEDLKDNF 68 (339)
T ss_dssp EESC-CCTTSTTTTTTB
T ss_pred ECcC-cCCCChHHhcCc
Confidence 3444 778999998753
No 4
>d1thma_ c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgaris [TaxId: 2026]}
Probab=16.95 E-value=26 Score=20.63 Aligned_cols=16 Identities=38% Similarity=0.574 Sum_probs=11.4
Q ss_pred cccCCCCCCCccccCCC
Q psy6945 5 LSTGRVTSDHQDFKDLP 21 (61)
Q Consensus 5 Ls~G~V~~~H~Df~~~~ 21 (61)
|.+| |..+||||+++.
T Consensus 37 iDsG-i~~~H~~~~~~~ 52 (279)
T d1thma_ 37 VDTG-VQSNHPDLAGKV 52 (279)
T ss_dssp EESC-CCTTCTTTTTTE
T ss_pred EcCC-CCCCChhhcCCe
Confidence 3344 778999999754
No 5
>d1p8ja2 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=16.45 E-value=19 Score=21.41 Aligned_cols=12 Identities=17% Similarity=0.318 Sum_probs=9.5
Q ss_pred CCCCCccccCCC
Q psy6945 10 VTSDHQDFKDLP 21 (61)
Q Consensus 10 V~~~H~Df~~~~ 21 (61)
|..+||||+++.
T Consensus 48 v~~~Hpdl~~~~ 59 (334)
T d1p8ja2 48 IEKNHPDLAGNY 59 (334)
T ss_dssp CCTTCTTTGGGB
T ss_pred CCCCChhHhhcc
Confidence 678999998643
No 6
>d1r0re_ c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1423]}
Probab=13.78 E-value=30 Score=20.25 Aligned_cols=13 Identities=38% Similarity=0.810 Sum_probs=9.5
Q ss_pred cccCCCCCCCcccc
Q psy6945 5 LSTGRVTSDHQDFK 18 (61)
Q Consensus 5 Ls~G~V~~~H~Df~ 18 (61)
|.+| |..+||||+
T Consensus 31 iDtG-v~~~Hp~l~ 43 (274)
T d1r0re_ 31 LDTG-IQASHPDLN 43 (274)
T ss_dssp EESC-CCTTCTTCC
T ss_pred ECCC-CCCCChhhc
Confidence 3444 778999996
No 7
>d1v6ca_ c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseudoalteromonas sp. AS-11 [TaxId: 247492]}
Probab=12.89 E-value=32 Score=21.64 Aligned_cols=12 Identities=17% Similarity=0.257 Sum_probs=10.0
Q ss_pred CCCCCccccCCC
Q psy6945 10 VTSDHQDFKDLP 21 (61)
Q Consensus 10 V~~~H~Df~~~~ 21 (61)
|..+||||+++.
T Consensus 33 id~~Hp~~~~~~ 44 (435)
T d1v6ca_ 33 YDRSHNDLNANN 44 (435)
T ss_dssp CCTTSTTTTTSE
T ss_pred CCCCChhhccCe
Confidence 788999998754
No 8
>d2h85a1 c.66.1.48 (A:1-190) Nsp15 {SARS coronavirus [TaxId: 227859]}
Probab=11.21 E-value=24 Score=21.65 Aligned_cols=45 Identities=18% Similarity=0.270 Sum_probs=26.9
Q ss_pred EEecccCCCCCCCccccCCCccchhhhhccCCCCCceeccCCCccccCCCCCCceeeee
Q psy6945 2 IEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60 (61)
Q Consensus 2 yelLs~G~V~~~H~Df~~~~y~~~l~~~~~~~~~~~l~H~f~L~SAY~~~~l~fTNyT~ 60 (61)
+|+.++.+| +.||+.+ .|++. +...++.|-|=. |.. +-||+++|.
T Consensus 55 FElyAKR~i-~~~P~~~------iL~nL-----gV~~t~~fvlWD-Ye~-~~p~~~~T~ 99 (190)
T d2h85a1 55 FELWAKRNI-KPVPEIK------ILNNL-----GVDIAANTVIWD-YKR-EAPAHVSTI 99 (190)
T ss_dssp HHHHHTBCC-SCBCCHH------HHHHT-----TCCEESSSBCEE-TTT-TEESSSSEE
T ss_pred hhhhhhccc-CCCCchh------HHhcC-----CeeEEeeeEEEE-ecC-CCcccccce
Confidence 456666666 5577765 33332 556777776654 543 467777775
No 9
>d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp., AK.1 [TaxId: 1409]}
Probab=10.89 E-value=47 Score=19.67 Aligned_cols=12 Identities=25% Similarity=0.299 Sum_probs=9.6
Q ss_pred CCCCCccccCCC
Q psy6945 10 VTSDHQDFKDLP 21 (61)
Q Consensus 10 V~~~H~Df~~~~ 21 (61)
|..+||||+++.
T Consensus 42 i~~~h~~l~~~~ 53 (280)
T d1dbia_ 42 VDYTHPDLDGKV 53 (280)
T ss_dssp CCTTSTTTTTTE
T ss_pred cCCCChhhcCCe
Confidence 778999998653
No 10
>d2gtia1 c.66.1.48 (A:1-194) Nsp15 {Murine hepatitis virus, MHV [TaxId: 11138]}
Probab=10.81 E-value=22 Score=21.85 Aligned_cols=45 Identities=20% Similarity=0.403 Sum_probs=25.3
Q ss_pred EEecccCCCCCCCccccCCCccchhhhhccCCCCCceeccCCCccccCCCCCCceeeee
Q psy6945 2 IEFLSTGRVTSDHQDFKDLPYKSVLNKICQNDKSNDFTHSFKLASAYSEDIMPYTNYTY 60 (61)
Q Consensus 2 yelLs~G~V~~~H~Df~~~~y~~~l~~~~~~~~~~~l~H~f~L~SAY~~~~l~fTNyT~ 60 (61)
+|+.++.+| ..||+.+ .|++. +...+..|-|=. |.. +-||+++|.
T Consensus 55 FElyAkR~i-~~~P~~~------iL~nL-----gV~~t~~fvlWD-ye~-~~p~~~~T~ 99 (194)
T d2gtia1 55 VELFAKRSI-RPHPELK------LFRNL-----NIDVCWSHVLWD-YAK-DSVFCSSTY 99 (194)
T ss_dssp HHHHHTBCC-SCBCCHH------HHHHT-----TCCEESSCBCEE-TTT-TEESSSCBS
T ss_pred hhhhhhccc-CCCCchH------HHhcC-----CceEEeeeEEEE-ecc-Cccccccce
Confidence 456666666 5577765 33332 445666665543 443 456666664
Done!