RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy695
(214 letters)
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS)
{Thermus thermophilus [TaxId: 274]}
Length = 370
Score = 48.0 bits (113), Expect = 2e-07
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 132 PTLNKKLRVLVDFSSPNIAKEMHVGHL 158
P + VLV+ +S N KE+HVGHL
Sbjct: 1 PFPRRPGVVLVEHTSVNPNKELHVGHL 27
>d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 348
Score = 47.2 bits (111), Expect = 5e-07
Identities = 14/25 (56%), Positives = 19/25 (76%)
Query: 134 LNKKLRVLVDFSSPNIAKEMHVGHL 158
L + +V+++FSSPNIAK H GHL
Sbjct: 4 LVENKKVIIEFSSPNIAKPFHAGHL 28
>d1iq0a3 d.67.2.1 (A:1-96) Arginyl-tRNA synthetase (ArgRS),
N-terminal 'additional' domain {Thermus thermophilus
[TaxId: 274]}
Length = 96
Score = 42.1 bits (99), Expect = 3e-06
Identities = 22/108 (20%), Positives = 34/108 (31%), Gaps = 19/108 (17%)
Query: 15 LSDVFTHAVQVAFPELG-DKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPF 73
L A+ A E+G VA + K GD+ AL K + K P
Sbjct: 2 LRRALEEAIAQALKEMGVPVRLKVARAPKD---KPGDYGVP-LFALAKELR-----KPPQ 52
Query: 74 DIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQI 121
IAQ + L + + + G++N L +
Sbjct: 53 AIAQELKD----RLPLPEFVEEAV-----PVGGYLNFRLRTEALLREA 91
>d1f7ua3 d.67.2.1 (A:2-135) Arginyl-tRNA synthetase (ArgRS),
N-terminal 'additional' domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 134
Score = 36.4 bits (84), Expect = 7e-04
Identities = 16/82 (19%), Positives = 26/82 (31%), Gaps = 17/82 (20%)
Query: 48 FGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGF 107
GD K NP D+A + A ++K+E P F
Sbjct: 65 RGDLLIPIPRLRIK-------GANPKDLAV--------QWAEKFPCGDFLEKVEANGP-F 108
Query: 108 VNVFLSRVYAGEQ-IKDIIVNG 128
+ F + + + I DI+
Sbjct: 109 IQFFFNPQFLAKLVIPDILTRK 130
>d2ayua1 d.305.1.1 (A:70-370) Nucleosome assembly protein, NAP
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 35.0 bits (80), Expect = 0.005
Identities = 11/43 (25%), Positives = 24/43 (55%)
Query: 170 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKN 212
+E+ + E+ + +E E E E +EEEK + + ++++ K
Sbjct: 73 QEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSEEEQVKG 115
Score = 34.6 bits (79), Expect = 0.006
Identities = 10/43 (23%), Positives = 24/43 (55%)
Query: 167 GKLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKR 209
G+ + + E+ + +E E E E +EEE+ + + E+++ +
Sbjct: 72 GQEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSEEEQVK 114
Score = 33.8 bits (77), Expect = 0.010
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 165 GWGKLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKK 208
G + + E+ + +E E E E +EEE+ + EEE+ K
Sbjct: 72 GQEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSEEEQVKG 115
Score = 33.1 bits (75), Expect = 0.016
Identities = 9/44 (20%), Positives = 22/44 (50%)
Query: 171 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNKI 214
+E+ + E+ + +E E E E +EE++ + ++ + I
Sbjct: 73 QEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSEEEQVKGI 116
Score = 25.0 bits (54), Expect = 9.0
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 163 CHGWGKLEEEEEEEEEEEEEEEEEEEEEEEEEEE 196
++ E E E +EEE+ + + EEE+ +
Sbjct: 81 IAKGQEIVESLNETELLVDEEEKAQNDSEEEQVK 114
>d1ofcx3 a.187.1.1 (X:697-798) HAND domain of the nucleosome
remodeling ATPase ISWI {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 102
Score = 32.5 bits (74), Expect = 0.010
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEE 202
E + + + EE+ + +E E EEE +EKE
Sbjct: 61 NTELGSDATKVQREEQRKIDEAEPLTEEEIQEKEN 95
Score = 29.8 bits (67), Expect = 0.078
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEE 203
+ + + EE+ + +E E EEE +E+E +
Sbjct: 64 LGSDATKVQREEQRKIDEAEPLTEEEIQEKENLLSQ 99
Score = 29.4 bits (66), Expect = 0.11
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 174 EEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRR 210
+ E + + + EE+ + +E E EEE ++K
Sbjct: 59 PKNTELGSDATKVQREEQRKIDEAEPLTEEEIQEKEN 95
Score = 28.6 bits (64), Expect = 0.23
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 173 EEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKR 209
+ E + + + EE+ + +E E EEE ++K+
Sbjct: 59 PKNTELGSDATKVQREEQRKIDEAEPLTEEEIQEKEN 95
Score = 28.3 bits (63), Expect = 0.24
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEE 204
+L + + + EE+ + +E E EEE +E+E +
Sbjct: 63 ELGSDATKVQREEQRKIDEAEPLTEEEIQEKENLLSQ 99
Score = 28.3 bits (63), Expect = 0.30
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 167 GKLEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 198
+ + + EE+ + +E E EEE +E+E
Sbjct: 64 LGSDATKVQREEQRKIDEAEPLTEEEIQEKEN 95
>d1v63a_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream
binding factor 1, UBF-1) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 101
Score = 32.2 bits (73), Expect = 0.010
Identities = 7/69 (10%), Positives = 27/69 (39%), Gaps = 5/69 (7%)
Query: 150 AKEMHVGHLSRSLCHGWGKLEEEEEEEEEEEEEEEEEEEEEEEEE-----EEEEEKEEEE 204
+ + + W ++ + ++E ++ EE++ + + + ++ +E
Sbjct: 29 LNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVKSLSPQDRAAYKE 88
Query: 205 KKKKRRKNK 213
+RK+
Sbjct: 89 YISNKRKSG 97
>d1qkla_ a.143.1.2 (A:) RPB6 {Human (Homo sapiens) [TaxId: 9606]}
Length = 127
Score = 32.1 bits (73), Expect = 0.016
Identities = 10/45 (22%), Positives = 23/45 (51%)
Query: 170 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNKI 214
+ E+ + ++ ++ EE+E ++ E EEE +E E + +
Sbjct: 3 DNEDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQA 47
Score = 31.3 bits (71), Expect = 0.032
Identities = 10/44 (22%), Positives = 24/44 (54%)
Query: 170 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNK 213
+ + ++ ++ EE+E ++ E EEE +E E ++ + N+
Sbjct: 6 DNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQ 49
Score = 30.9 bits (70), Expect = 0.040
Identities = 9/46 (19%), Positives = 23/46 (50%)
Query: 169 LEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNKI 214
+ + E+ + ++ ++ EE+E ++ E EEE +E + +
Sbjct: 1 MSDNEDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQ 46
Score = 30.2 bits (68), Expect = 0.089
Identities = 11/44 (25%), Positives = 23/44 (52%)
Query: 170 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNK 213
E+ + ++ ++ EE+E ++ E EEE +E E +R +
Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQAN 48
Score = 30.2 bits (68), Expect = 0.090
Identities = 11/44 (25%), Positives = 23/44 (52%)
Query: 170 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNK 213
+ ++ ++ EE+E ++ E EEE +E E E+ + +K
Sbjct: 9 DGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKRI 52
Score = 28.6 bits (64), Expect = 0.28
Identities = 10/44 (22%), Positives = 24/44 (54%)
Query: 171 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNKI 214
+ ++ ++ EE+E ++ E EEE +E E ++ + + +I
Sbjct: 9 DGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKRI 52
Score = 27.5 bits (61), Expect = 0.60
Identities = 9/44 (20%), Positives = 22/44 (50%)
Query: 170 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNK 213
+ ++ ++ EE+E ++ E EEE +E + ++ + K
Sbjct: 7 NFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQK 50
>d2lefa_ a.21.1.1 (A:) Lymphoid enhancer-binding factor, LEF1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 86
Score = 30.6 bits (69), Expect = 0.035
Identities = 12/60 (20%), Positives = 24/60 (40%)
Query: 152 EMHVGHLSRSLCHGWGKLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRK 211
+++ L W L EE+ + E +E + + + ++KK+KR K
Sbjct: 27 LKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREK 86
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding
protein 1 (GBP1), C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 300
Score = 32.0 bits (72), Expect = 0.037
Identities = 13/47 (27%), Positives = 27/47 (57%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNKI 214
+L E+ E + + +E+E + +E+E+ KE +K+ + KN+I
Sbjct: 247 QLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEI 293
Score = 31.3 bits (70), Expect = 0.070
Identities = 8/58 (13%), Positives = 25/58 (43%)
Query: 157 HLSRSLCHGWGKLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNKI 214
+ + +E ++ E+ E + + +E+E + +E+E+ K+ + +
Sbjct: 229 KNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKES 286
Score = 30.9 bits (69), Expect = 0.093
Identities = 9/62 (14%), Positives = 27/62 (43%)
Query: 150 AKEMHVGHLSRSLCHGWGKLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKR 209
+ + L +E++E +E ++ E+ E + + +E+E+ K +++
Sbjct: 215 SAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQ 274
Query: 210 RK 211
+
Sbjct: 275 EQ 276
Score = 30.5 bits (68), Expect = 0.15
Identities = 9/45 (20%), Positives = 23/45 (51%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKN 212
K+E + + +E+E + +E+E+ +E ++E K ++
Sbjct: 251 KMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQD 295
Score = 30.1 bits (67), Expect = 0.18
Identities = 10/46 (21%), Positives = 22/46 (47%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNK 213
K E+ E + + +E+E + +E+E+ +E +K+ R
Sbjct: 246 KQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKN 291
Score = 29.3 bits (65), Expect = 0.32
Identities = 8/44 (18%), Positives = 21/44 (47%)
Query: 171 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNKI 214
E + + +E+E + +E+E+ +E ++E + K +
Sbjct: 253 ENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDL 296
Score = 29.3 bits (65), Expect = 0.35
Identities = 9/42 (21%), Positives = 22/42 (52%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKR 209
+L +E+E + +E+E+ +E ++E K E + + +
Sbjct: 258 QLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTK 299
Score = 28.9 bits (64), Expect = 0.44
Identities = 9/44 (20%), Positives = 23/44 (52%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRK 211
L++ E+ E + + +E+E + +E+E+ +E +K +
Sbjct: 244 HLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESR 287
Score = 28.6 bits (63), Expect = 0.61
Identities = 7/44 (15%), Positives = 24/44 (54%)
Query: 170 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNK 213
++ E+ E + + +E+E + +E+E+ K+ +++++
Sbjct: 244 HLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESR 287
Score = 28.2 bits (62), Expect = 0.66
Identities = 8/44 (18%), Positives = 23/44 (52%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRK 211
+++ +E+E + +E+E+ +E ++E + E + + K
Sbjct: 256 RVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTK 299
Score = 27.4 bits (60), Expect = 1.4
Identities = 5/46 (10%), Positives = 22/46 (47%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNK 213
+ ++ E+ E + + +E+E + +E+++ ++ ++
Sbjct: 243 EHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRI 288
Score = 25.9 bits (56), Expect = 3.6
Identities = 8/46 (17%), Positives = 23/46 (50%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNK 213
+ E + + E+ E++E +E ++ EK E ++ + ++ +
Sbjct: 219 SAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQE 264
Score = 25.5 bits (55), Expect = 5.4
Identities = 8/46 (17%), Positives = 24/46 (52%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNK 213
+ + E+ E++E +E ++ E+ E + + +E+++ K +
Sbjct: 227 QRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQ 272
Score = 25.5 bits (55), Expect = 6.0
Identities = 7/43 (16%), Positives = 21/43 (48%)
Query: 171 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNK 213
E + + E+ E++E +E ++ E+ E + + + + +
Sbjct: 223 LHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQER 265
Score = 25.1 bits (54), Expect = 6.4
Identities = 9/45 (20%), Positives = 20/45 (44%)
Query: 170 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNKI 214
+ + E + + E+ E++E +E K+ EK + R +
Sbjct: 216 AQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLL 260
Score = 25.1 bits (54), Expect = 8.2
Identities = 8/44 (18%), Positives = 23/44 (52%)
Query: 170 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNK 213
+ + E+ E++E +E ++ E+ E ++ + K+++R
Sbjct: 226 MQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLAL 269
>d1v64a_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream
binding factor 1, UBF-1) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 108
Score = 30.7 bits (69), Expect = 0.047
Identities = 10/61 (16%), Positives = 28/61 (45%)
Query: 151 KEMHVGHLSRSLCHGWGKLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRR 210
K++ W L ++E++ ++ ++++++ E E E EEE+++
Sbjct: 37 KDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGE 96
Query: 211 K 211
+
Sbjct: 97 E 97
>d1gsma2 b.1.1.4 (A:91-206) Mucosal addressin cell adhesion
molecule-1 (MADCAM-1) {Human (Homo sapiens) [TaxId:
9606]}
Length = 116
Score = 30.3 bits (68), Expect = 0.057
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 158 LSRSLCHGWGKLEEEEEEEEEEEEEEEEEEEEEEE 192
LS SL G +LE + E +EEEEE + +E+
Sbjct: 35 LSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDV 69
Score = 26.4 bits (58), Expect = 1.2
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 169 LEEEEEEEEEEEEEEEEEEEEEEEEEEEE 197
+ +E E + E +EEEEE + +E+
Sbjct: 41 VGGQELEGAQALGPEVQEEEEEPQGDEDV 69
Score = 26.4 bits (58), Expect = 1.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 169 LEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 198
L +E E + E +EEEEE + +E+
Sbjct: 40 LVGGQELEGAQALGPEVQEEEEEPQGDEDV 69
Score = 26.4 bits (58), Expect = 1.5
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 173 EEEEEEEEEEEEEEEEEEEEEEEEEEE 199
+E E + E +EEEEE + +E+
Sbjct: 43 GQELEGAQALGPEVQEEEEEPQGDEDV 69
Score = 25.7 bits (56), Expect = 2.3
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 175 EEEEEEEEEEEEEEEEEEEEEEEEEKE 201
+E E + E +EEEEE + +E
Sbjct: 43 GQELEGAQALGPEVQEEEEEPQGDEDV 69
Score = 24.9 bits (54), Expect = 5.1
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 178 EEEEEEEEEEEEEEEEEEEEEEKEEEE 204
+E E + E +EEEEE + +E+
Sbjct: 43 GQELEGAQALGPEVQEEEEEPQGDEDV 69
Score = 24.5 bits (53), Expect = 6.1
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 177 EEEEEEEEEEEEEEEEEEEEEEEKEEE 203
+E E + E +EEEEE + E+
Sbjct: 43 GQELEGAQALGPEVQEEEEEPQGDEDV 69
Score = 24.5 bits (53), Expect = 6.7
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 176 EEEEEEEEEEEEEEEEEEEEEEEEKEE 202
+E E + E +EEEEE + +++
Sbjct: 43 GQELEGAQALGPEVQEEEEEPQGDEDV 69
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional)
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 368
Score = 31.4 bits (70), Expect = 0.069
Identities = 8/39 (20%), Positives = 17/39 (43%)
Query: 176 EEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNKI 214
+ EE E++ E E +E+ + ++K N +
Sbjct: 2 RQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTV 40
>d1sa0e_ a.137.10.1 (E:) Stathmin 4 {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 138
Score = 29.5 bits (66), Expect = 0.17
Identities = 10/46 (21%), Positives = 22/46 (47%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNK 213
+ +E+ ++ E +E E E +E+++ ++ RKNK
Sbjct: 89 NFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNK 134
Score = 28.3 bits (63), Expect = 0.44
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNK 213
LEE +++ E EE + +E E + E+ E E E +K +N
Sbjct: 43 SLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENN 88
Score = 27.9 bits (62), Expect = 0.45
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKN 212
E+ ++ E +E E E +E+++ EE +K K K
Sbjct: 94 AKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKELKE 138
Score = 27.2 bits (60), Expect = 0.90
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNK 213
KLE EE + +E E + E+ E E E +K EE + K
Sbjct: 50 KLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAK 95
Score = 26.8 bits (59), Expect = 1.1
Identities = 6/47 (12%), Positives = 17/47 (36%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNKI 214
+ EE + +E+ ++ E +E E ++ + +
Sbjct: 81 QKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHA 127
Score = 25.6 bits (56), Expect = 2.8
Identities = 7/42 (16%), Positives = 16/42 (38%)
Query: 170 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRK 211
E ++ EE + +E+ ++ E +E E +
Sbjct: 78 EVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLER 119
Score = 25.6 bits (56), Expect = 3.0
Identities = 7/46 (15%), Positives = 19/46 (41%)
Query: 169 LEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNKI 214
E E E ++ EE + +E+ ++ + +E ++ +
Sbjct: 72 KREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAML 117
Score = 25.6 bits (56), Expect = 3.2
Identities = 11/44 (25%), Positives = 19/44 (43%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRK 211
E E + E+ E E E ++ EE K +EK ++ +
Sbjct: 60 YQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKME 103
Score = 25.2 bits (55), Expect = 3.8
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRK 211
L E+ E E E ++ EE + +E+ ++ E K+ R
Sbjct: 68 HLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREA 111
Score = 25.2 bits (55), Expect = 4.0
Identities = 9/46 (19%), Positives = 20/46 (43%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNK 213
L+ E+ E E E ++ EE + +EK ++ + + +
Sbjct: 65 LLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENRE 110
Score = 25.2 bits (55), Expect = 4.2
Identities = 9/44 (20%), Positives = 17/44 (38%)
Query: 170 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNK 213
E E ++ EE + +E+ ++ E KE E +
Sbjct: 76 EREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLER 119
Score = 25.2 bits (55), Expect = 4.7
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 171 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNKI 214
+++ E EE + +E E + E+ E E+E +K + N I
Sbjct: 48 QKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFI 91
Score = 25.2 bits (55), Expect = 4.8
Identities = 9/43 (20%), Positives = 19/43 (44%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRR 210
K E E E ++ EE + +E+ ++ E +E ++
Sbjct: 72 KREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLA 114
Score = 24.8 bits (54), Expect = 5.6
Identities = 11/44 (25%), Positives = 19/44 (43%)
Query: 170 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNK 213
E + E+ E E E ++ EE + +E+ +K NK
Sbjct: 63 AELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNK 106
Score = 24.5 bits (53), Expect = 6.8
Identities = 7/44 (15%), Positives = 17/44 (38%)
Query: 170 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNK 213
E E ++ EE + +E+ ++ E +E + +
Sbjct: 75 HEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLE 118
Score = 24.5 bits (53), Expect = 6.8
Identities = 10/44 (22%), Positives = 19/44 (43%)
Query: 170 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNK 213
E+ E E E ++ EE + +E+ +K E K+ +
Sbjct: 71 EKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLA 114
Score = 24.5 bits (53), Expect = 6.9
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRK 211
+ +E E + E+ E E E ++ EE + K+K +K
Sbjct: 58 RKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQK 101
Score = 24.5 bits (53), Expect = 8.0
Identities = 9/45 (20%), Positives = 19/45 (42%)
Query: 170 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNKI 214
+E E + E+ E E E ++ EE + ++K ++
Sbjct: 61 QEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESN 105
>d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A
subunit) {Human (Homo sapiens) [TaxId: 9606]}
Length = 473
Score = 29.6 bits (66), Expect = 0.30
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 188 EEEEEEEEEEEEKEEEEKKKKRRKNKI 214
++E EE+ + +K+ +NKI
Sbjct: 361 DDELGSEEDGFDGATAAARKEVIRNKI 387
Score = 25.3 bits (55), Expect = 6.0
Identities = 6/29 (20%), Positives = 13/29 (44%)
Query: 182 EEEEEEEEEEEEEEEEEEKEEEEKKKKRR 210
++E EE+ + ++E + K R
Sbjct: 361 DDELGSEEDGFDGATAAARKEVIRNKIRA 389
>d1siga_ a.177.1.1 (A:) Sigma70 {Escherichia coli [TaxId: 562]}
Length = 334
Score = 29.1 bits (64), Expect = 0.34
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 167 GKLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKK 206
G ++ EE+ E +E+ +++E+E EE+
Sbjct: 52 GFVDPNAEEDLAPTATHVGSELSQEDLDDDEDEDEEDGDD 91
Score = 28.7 bits (63), Expect = 0.55
Identities = 8/40 (20%), Positives = 21/40 (52%)
Query: 165 GWGKLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEE 204
G+ EE+ E +E+ +++E+E+E++ ++
Sbjct: 52 GFVDPNAEEDLAPTATHVGSELSQEDLDDDEDEDEEDGDD 91
Score = 27.9 bits (61), Expect = 0.86
Identities = 8/39 (20%), Positives = 16/39 (41%)
Query: 171 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKR 209
+ EE+ E +E+ +++E E+EE
Sbjct: 54 VDPNAEEDLAPTATHVGSELSQEDLDDDEDEDEEDGDDD 92
Score = 27.9 bits (61), Expect = 0.98
Identities = 7/39 (17%), Positives = 18/39 (46%)
Query: 169 LEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKK 207
+ EE+ E +E+ +++E+++EE+
Sbjct: 53 FVDPNAEEDLAPTATHVGSELSQEDLDDDEDEDEEDGDD 91
Score = 27.6 bits (60), Expect = 1.1
Identities = 8/35 (22%), Positives = 20/35 (57%)
Query: 170 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEE 204
EE+ E +E+ +++E+E+EE+ +++
Sbjct: 59 EEDLAPTATHVGSELSQEDLDDDEDEDEEDGDDDS 93
Score = 25.6 bits (55), Expect = 4.6
Identities = 6/39 (15%), Positives = 17/39 (43%)
Query: 172 EEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRR 210
+ EE+ E +E+ +++++E+E+
Sbjct: 54 VDPNAEEDLAPTATHVGSELSQEDLDDDEDEDEEDGDDD 92
>d1rq0a_ e.38.1.1 (A:) Peptide chain release factor 1, RF1
{Thermotoga maritima [TaxId: 2336]}
Length = 333
Score = 28.9 bits (64), Expect = 0.46
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKK 206
+ +E +E E EE E E E E+ E+E ++ ++
Sbjct: 37 NITNRIKETQEFIELLREEGENELEIEKYEKELDQLYQE 75
Score = 27.8 bits (61), Expect = 0.97
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKN 212
K+EE E +E +E E EE E E E ++ E++ + +
Sbjct: 31 KIEEIENITNRIKETQEFIELLREEGENELEIEKYEKELDQLYQE 75
Score = 27.8 bits (61), Expect = 1.1
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRR 210
++E +E +E E EE E E E E+ ++E ++ +
Sbjct: 34 EIENITNRIKETQEFIELLREEGENELEIEKYEKELDQLYQEL 76
Score = 25.1 bits (54), Expect = 7.8
Identities = 11/44 (25%), Positives = 19/44 (43%)
Query: 171 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNKI 214
+E E EE E E E E+ E+E ++ ++ + I
Sbjct: 46 QEFIELLREEGENELEIEKYEKELDQLYQELLFLLSPEASDKAI 89
>d1j46a_ a.21.1.1 (A:) SRY {Human (Homo sapiens) [TaxId: 9606]}
Length = 85
Score = 26.7 bits (59), Expect = 0.63
Identities = 10/57 (17%), Positives = 23/57 (40%)
Query: 152 EMHVGHLSRSLCHGWGKLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKK 208
M +S+ L + W L E E+ +E ++ + E+ + + + + K
Sbjct: 29 RMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQAMHREKYPNYKYRPRRKAKMLPK 85
>d1k99a_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream
binding factor 1, UBF-1) {Human (Homo sapiens) [TaxId:
9606]}
Length = 91
Score = 26.8 bits (59), Expect = 0.73
Identities = 12/57 (21%), Positives = 28/57 (49%)
Query: 152 EMHVGHLSRSLCHGWGKLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKK 208
EM L++ L + +L E+++ + ++ + E++E E E+ + + KK
Sbjct: 35 EMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKK 91
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 124
Score = 27.4 bits (60), Expect = 0.78
Identities = 10/45 (22%), Positives = 17/45 (37%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKN 212
+L +EE+E E+ E E+E E +K +
Sbjct: 2 ELTDEEKEIINRVIARAEKMETMEQERIGRLVDRLETMRKNVAGD 46
>d1wp5a_ b.68.10.1 (A:) Topoisomerase IV subunit A, ParC, C-terminal
domain {Bacillus stearothermophilus [TaxId: 1422]}
Length = 323
Score = 28.0 bits (61), Expect = 0.89
Identities = 5/18 (27%), Positives = 9/18 (50%)
Query: 168 KLEEEEEEEEEEEEEEEE 185
K+E E++ E+ E
Sbjct: 304 KVEAEDKTEKLAAALEHH 321
Score = 26.9 bits (58), Expect = 1.9
Identities = 4/17 (23%), Positives = 7/17 (41%)
Query: 184 EEEEEEEEEEEEEEEEK 200
E E++ E+ E
Sbjct: 306 EAEDKTEKLAAALEHHH 322
Score = 26.5 bits (57), Expect = 3.0
Identities = 6/30 (20%), Positives = 9/30 (30%), Gaps = 7/30 (23%)
Query: 168 KLEEEEE-------EEEEEEEEEEEEEEEE 190
EE E E++ E+ E
Sbjct: 292 DEEENGRVISVWKVEAEDKTEKLAAALEHH 321
Score = 26.1 bits (56), Expect = 3.8
Identities = 4/16 (25%), Positives = 7/16 (43%)
Query: 176 EEEEEEEEEEEEEEEE 191
E E++ E+ E
Sbjct: 306 EAEDKTEKLAAALEHH 321
Score = 26.1 bits (56), Expect = 3.8
Identities = 4/16 (25%), Positives = 7/16 (43%)
Query: 177 EEEEEEEEEEEEEEEE 192
E E++ E+ E
Sbjct: 306 EAEDKTEKLAAALEHH 321
Score = 26.1 bits (56), Expect = 3.8
Identities = 4/16 (25%), Positives = 7/16 (43%)
Query: 179 EEEEEEEEEEEEEEEE 194
E E++ E+ E
Sbjct: 306 EAEDKTEKLAAALEHH 321
Score = 26.1 bits (56), Expect = 3.8
Identities = 4/16 (25%), Positives = 7/16 (43%)
Query: 180 EEEEEEEEEEEEEEEE 195
E E++ E+ E
Sbjct: 306 EAEDKTEKLAAALEHH 321
Score = 26.1 bits (56), Expect = 3.8
Identities = 4/16 (25%), Positives = 7/16 (43%)
Query: 181 EEEEEEEEEEEEEEEE 196
E E++ E+ E
Sbjct: 306 EAEDKTEKLAAALEHH 321
Score = 26.1 bits (56), Expect = 3.8
Identities = 4/16 (25%), Positives = 7/16 (43%)
Query: 183 EEEEEEEEEEEEEEEE 198
E E++ E+ E
Sbjct: 306 EAEDKTEKLAAALEHH 321
Score = 26.1 bits (56), Expect = 4.1
Identities = 4/17 (23%), Positives = 7/17 (41%)
Query: 189 EEEEEEEEEEEKEEEEK 205
E E++ E+ E
Sbjct: 306 EAEDKTEKLAAALEHHH 322
Score = 24.9 bits (53), Expect = 7.7
Identities = 4/16 (25%), Positives = 7/16 (43%)
Query: 188 EEEEEEEEEEEEKEEE 203
E E++ E+ E
Sbjct: 306 EAEDKTEKLAAALEHH 321
>d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 268
Score = 27.7 bits (61), Expect = 0.96
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 170 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNK 213
+ E+ +EE EE+ E+ + EE+ E ++ K ++
Sbjct: 213 DPEKATQEEVEEKNILEKVKAAMTEEDLAELARATEELKLKQET 256
Score = 25.8 bits (56), Expect = 4.8
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 170 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNKI 214
E+ +EE EE+ E+ + EE+ E E+ K +++
Sbjct: 214 PEKATQEEVEEKNILEKVKAAMTEEDLAELARATEELKLKQETPD 258
Score = 25.0 bits (54), Expect = 7.8
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKK 206
+ E EE+ E+ + EE+ E EE K ++E
Sbjct: 219 QEEVEEKNILEKVKAAMTEEDLAELARATEELKLKQETP 257
>d1ykhb1 a.252.1.1 (B:2-130) RNA polymerase II holoenzyme component
SRB7 (MED21) {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 129
Score = 26.7 bits (59), Expect = 1.1
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 174 EEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNKI 214
+ EE+ + + +++ E E+EK E KKK++ +
Sbjct: 81 GVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKLMRHV 121
Score = 25.1 bits (55), Expect = 4.9
Identities = 8/39 (20%), Positives = 21/39 (53%)
Query: 170 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKK 208
+ EE+ + + +++ E E+E+ E K++E+ +
Sbjct: 82 VDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKLMRH 120
Score = 24.8 bits (54), Expect = 6.0
Identities = 8/40 (20%), Positives = 21/40 (52%)
Query: 167 GKLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKK 206
L + EE+ + + +++ E E+E+ E ++++K
Sbjct: 77 DSLPGVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEK 116
>d1lwma_ a.21.1.1 (A:) NHP6a {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 93
Score = 26.4 bits (58), Expect = 1.2
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 152 EMHVGHLSRSLCHGWGKLEEEEEEEEEEEEEEEEEEEEEEEEE 194
++ G + + L W L EE++ E + + +++ E E+E
Sbjct: 45 DITFGQVGKKLGEKWKALTPEEKQPYEAKAQADKKRYESEKEL 87
>d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 332
Score = 27.2 bits (60), Expect = 1.5
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 184 EEEEEEEEEEEEEEEEKEEEEKKKKRR 210
+E ++ E EE+ K +EK +K R
Sbjct: 305 KENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 26.5 bits (58), Expect = 2.8
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 181 EEEEEEEEEEEEEEEEEEEKEEEEKKK 207
+E ++ E EE+ + KE+ EK++
Sbjct: 305 KENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 25.7 bits (56), Expect = 4.4
Identities = 5/27 (18%), Positives = 15/27 (55%)
Query: 185 EEEEEEEEEEEEEEEKEEEEKKKKRRK 211
+E ++ E EE+ + ++K ++ +
Sbjct: 305 KENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 25.7 bits (56), Expect = 4.5
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 183 EEEEEEEEEEEEEEEEEKEEEEKKKKR 209
+E ++ E EE+ + +E+ +K+R
Sbjct: 305 KENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 25.3 bits (55), Expect = 7.1
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 179 EEEEEEEEEEEEEEEEEEEEEKEEEEK 205
+E ++ E EE+ + +EK E+E+
Sbjct: 305 KENQKRRETEEKMRRAKLAKEKAEKER 331
>d1gt0d_ a.21.1.1 (D:) Sox-2 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 80
Score = 25.9 bits (57), Expect = 1.5
Identities = 13/62 (20%), Positives = 23/62 (37%), Gaps = 9/62 (14%)
Query: 152 EMHVGHLSRSLCHGWGKLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRK 211
+MH +S+ L W E E+ +E + ++ + K + RRK
Sbjct: 27 KMHNSEISKRLGAEWK---------LLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRK 77
Query: 212 NK 213
K
Sbjct: 78 TK 79
>d2a9ua1 a.118.23.1 (A:6-139) Ubiquitin carboxyl-terminal hydrolase
8, USH8 {Human (Homo sapiens) [TaxId: 9606]}
Length = 134
Score = 26.4 bits (58), Expect = 1.5
Identities = 9/38 (23%), Positives = 22/38 (57%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEK 205
+ E E + EE E ++ EE++ +EE ++ ++++
Sbjct: 96 EAERLSESLKLRYEEAEVRKKLEEKDRQEEAQRLQQKR 133
>d1qs0a_ c.36.1.11 (A:) 2-oxoisovalerate dehydrogenase (E1B), PP
module {Pseudomonas putida [TaxId: 303]}
Length = 407
Score = 26.8 bits (58), Expect = 2.1
Identities = 8/37 (21%), Positives = 12/37 (32%)
Query: 167 GKLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEE 203
G EEE + E E ++E E+
Sbjct: 346 GHWSEEEHQATTAEFEAAVIAAQKEAEQYGTLANGHI 382
Score = 25.2 bits (54), Expect = 7.3
Identities = 7/37 (18%), Positives = 11/37 (29%)
Query: 170 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKK 206
EEE + E E ++E E+
Sbjct: 350 EEEHQATTAEFEAAVIAAQKEAEQYGTLANGHIPSAA 386
Score = 25.2 bits (54), Expect = 7.6
Identities = 8/36 (22%), Positives = 13/36 (36%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEE 203
L + EEE + E E ++E E+
Sbjct: 341 HLIKIGHWSEEEHQATTAEFEAAVIAAQKEAEQYGT 376
Score = 24.8 bits (53), Expect = 9.9
Identities = 7/37 (18%), Positives = 11/37 (29%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEE 204
EEE + E E ++E E+
Sbjct: 346 GHWSEEEHQATTAEFEAAVIAAQKEAEQYGTLANGHI 382
>d1iruc_ d.153.1.4 (C:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 250
Score = 26.6 bits (58), Expect = 2.1
Identities = 12/46 (26%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 150 AKEMHVGHLSRSLCHGWGKLEEEEEEEEEEEEEEEEEEEEEEEEEE 195
A+++ + L+R +G + +++E E+ ++ EEEE + E E+
Sbjct: 207 AEKVEIATLTRE--NGKTVIRVLKQKEVEQLIKKHEEEEAKAEREK 250
Score = 24.6 bits (53), Expect = 8.4
Identities = 8/23 (34%), Positives = 17/23 (73%)
Query: 180 EEEEEEEEEEEEEEEEEEEEKEE 202
+++E E+ ++ EEEE + E+E+
Sbjct: 228 KQKEVEQLIKKHEEEEAKAEREK 250
Score = 24.6 bits (53), Expect = 8.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 183 EEEEEEEEEEEEEEEEEKEEEEK 205
+++E E+ ++ EEEE K E EK
Sbjct: 228 KQKEVEQLIKKHEEEEAKAEREK 250
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato
(Solanum tuberosum) [TaxId: 4113]}
Length = 364
Score = 26.5 bits (57), Expect = 2.6
Identities = 6/35 (17%), Positives = 17/35 (48%)
Query: 170 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEE 204
+E ++ +E+ + ++EE E+ ++E
Sbjct: 330 VSSKEVARLKKLVSYWKEQAGRKGDDEELEEIQDE 364
Score = 26.5 bits (57), Expect = 2.8
Identities = 7/36 (19%), Positives = 18/36 (50%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEE 203
+ +E ++ +E+ + ++EE EE ++E
Sbjct: 329 NVSSKEVARLKKLVSYWKEQAGRKGDDEELEEIQDE 364
>d1hsma_ a.21.1.1 (A:) High mobility group protein 1, HMG1 {Hamster
(Cricetulus griseus) [TaxId: 10029]}
Length = 79
Score = 24.8 bits (54), Expect = 3.1
Identities = 7/51 (13%), Positives = 25/51 (49%)
Query: 152 EMHVGHLSRSLCHGWGKLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEE 202
+ +G +++ L W ++++ E++ + +E+ E++ + K +
Sbjct: 27 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPD 77
>d2bfda1 c.36.1.11 (A:6-400) Branched-chain alpha-keto acid
dehydrogenase, PP module {Human (Homo sapiens) [TaxId:
9606]}
Length = 395
Score = 26.4 bits (57), Expect = 3.3
Identities = 7/36 (19%), Positives = 16/36 (44%)
Query: 167 GKLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEE 202
G +EE+E+ ++ + E E+ E + +
Sbjct: 322 GWWDEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNL 357
>d2ozla1 c.36.1.11 (A:1-361) E1-beta subunit of pyruvate
dehydrogenase (PP module) {Human (Homo sapiens) [TaxId:
9606]}
Length = 361
Score = 26.0 bits (56), Expect = 3.4
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 167 GKLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEE 202
EE +E + E +E E+ + + E EE
Sbjct: 299 NLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEE 334
>d1irud_ d.153.1.4 (D:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 243
Score = 25.8 bits (56), Expect = 3.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 185 EEEEEEEEEEEEEEEKEEEEKKKK 208
EE E+ E E+EKEE EKKK+
Sbjct: 220 NPEEIEKYVAEIEKEKEENEKKKQ 243
Score = 25.4 bits (55), Expect = 5.1
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 150 AKEMHVGHLSRSLCHGWGKLEEEEEEEEEEEEEEEEEEEEEEEE 193
K + + + R L EE E+ E E+E+EE E++++
Sbjct: 202 GKNIELAVMRRD--QSLKILNPEEIEKYVAEIEKEKEENEKKKQ 243
>d1i11a_ a.21.1.1 (A:) Sox-5 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 70
Score = 24.4 bits (53), Expect = 3.9
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 152 EMHVGHLSRSLCHGWGKLEEEEEEEEEEEEEEEEEEEEEE 191
+MH ++S+ L W + E++ EE+ ++ E+
Sbjct: 27 DMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK 66
>d1k4ta3 e.15.1.1 (A:201-430) Eukaryotic DNA topoisomerase I,
N-terminal DNA-binding fragment {Human (Homo sapiens)
[TaxId: 9606]}
Length = 230
Score = 25.8 bits (57), Expect = 4.1
Identities = 7/28 (25%), Positives = 17/28 (60%)
Query: 179 EEEEEEEEEEEEEEEEEEEEEKEEEEKK 206
+ + E ++ +EE+ + +EE E+ K+
Sbjct: 110 KAQTEARKQMSKEEKLKIKEENEKLLKE 137
>d1w85a_ c.36.1.11 (A:) Pyruvate dehydrogenase E1-alpha, PdhA
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 365
Score = 26.0 bits (56), Expect = 4.5
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 167 GKLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEE 202
G EEEE E+ +EE +E ++ +E +++ +
Sbjct: 304 GLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTD 339
>d1wgfa_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream
binding factor 1, UBF-1) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 90
Score = 24.5 bits (53), Expect = 4.9
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 152 EMHVGHLSRSLCHGWGKLEEEEEEEEEEEEEEEEEEEEEE 191
E+ L+R L W L E+++ + + E + + E +
Sbjct: 45 ELSESELTRLLARMWNDLSEKKKAKYKAREAALKAQSERK 84
>d1ud0a_ a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 84
Score = 24.3 bits (53), Expect = 5.0
Identities = 10/42 (23%), Positives = 24/42 (57%)
Query: 167 GKLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKK 208
KL+ + +E++++ ++ E ++ + EKEE E ++K
Sbjct: 20 EKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQK 61
>d1bjta_ e.11.1.1 (A:) DNA topoisomerase II, C-terminal fragment
(residues 410-1202) {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 760
Score = 25.9 bits (56), Expect = 5.1
Identities = 7/43 (16%), Positives = 21/43 (48%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRR 210
KL ++++E+E E E + ++ + + + ++ +R
Sbjct: 713 KLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVGYQEFLQRD 755
>d1p32a_ d.25.1.1 (A:) Acidic mitochondrial matrix protein p32
{Human (Homo sapiens) [TaxId: 9606]}
Length = 209
Score = 24.9 bits (54), Expect = 7.1
Identities = 10/44 (22%), Positives = 16/44 (36%)
Query: 168 KLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRK 211
+ EEE + ++ EE+E E E K +K
Sbjct: 64 NSIPPTFDGEEEPSQGQKVEEQEPELTSTPNFVVEVIKNDDGKK 107
>d1zd0a1 d.329.1.1 (A:9-144) Hypothetical protein PF0523 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 136
Score = 24.4 bits (53), Expect = 7.2
Identities = 8/35 (22%), Positives = 12/35 (34%)
Query: 177 EEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRK 211
E ++ E +E E E + E KK
Sbjct: 100 ENASALLQKILSTLEIKELELERCDLEYAKKAFED 134
>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse
gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 248
Score = 25.1 bits (54), Expect = 7.3
Identities = 7/39 (17%), Positives = 18/39 (46%)
Query: 173 EEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRK 211
E + + E + +E + E+ + +E + + RR+
Sbjct: 210 SAFIERAKLYDIEFKSIDEVDFEKLSRELDESRDRYRRR 248
>d1rnfa_ d.5.1.1 (A:) Ribonuclease 4 {Human (Homo sapiens) [TaxId:
9606]}
Length = 120
Score = 24.4 bits (53), Expect = 7.7
Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 50 DFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVT 84
D CN M K+ ++ N F I + I ++ +
Sbjct: 23 DRYCNLMMQRRKMTLYHCKRFNTF-IHEDIWNIRS 56
>d1oisa_ e.15.1.1 (A:) Eukaryotic DNA topoisomerase I, N-terminal
DNA-binding fragment {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 223
Score = 24.7 bits (54), Expect = 7.9
Identities = 5/28 (17%), Positives = 19/28 (67%)
Query: 179 EEEEEEEEEEEEEEEEEEEEEKEEEEKK 206
+ ++E++++ +E+++ E+E+ E+
Sbjct: 102 QLQKEQKKQLTSQEKKQIRLEREKFEED 129
>d1us7b_ a.205.1.1 (B:) Hsp90 co-chaperone CDC37 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 201
Score = 24.7 bits (54), Expect = 8.2
Identities = 10/59 (16%), Positives = 22/59 (37%)
Query: 144 FSSPNIAKEMHVGHLSRSLCHGWGKLEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEE 202
F+ A ++ + L ++ + E+ +E EEEE ++ + E
Sbjct: 91 FTKIKTADRQYMEGFNDELEAFKERVRGRAKLRIEKAMKEYEEEERKKRLGPGGLDPVE 149
>d1jk0a_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Baker's yeast
(Saccharomyces cerevisiae), Y2 [TaxId: 4932]}
Length = 334
Score = 24.7 bits (53), Expect = 8.7
Identities = 10/45 (22%), Positives = 20/45 (44%)
Query: 169 LEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKKKKRRKNK 213
L +E E EE + + +E+ ++ E + + + R K K
Sbjct: 1 LNKELETLREENRVKSDMLKEKLSKDAENHKAYLKSHQVHRHKLK 45
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.308 0.128 0.347
Gapped
Lambda K H
0.267 0.0552 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 827,001
Number of extensions: 42801
Number of successful extensions: 1310
Number of sequences better than 10.0: 1
Number of HSP's gapped: 780
Number of HSP's successfully gapped: 283
Length of query: 214
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 132
Effective length of database: 1,281,736
Effective search space: 169189152
Effective search space used: 169189152
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 51 (23.8 bits)