Query psy6951
Match_columns 72
No_of_seqs 129 out of 577
Neff 5.0
Searched_HMMs 29240
Date Fri Aug 16 22:54:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6951.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6951hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2d88_A Protein mical-3; all al 99.8 2E-21 7E-26 126.1 5.8 62 3-71 54-115 (121)
2 1bkr_A Spectrin beta chain; fi 99.8 2.5E-21 8.6E-26 123.6 5.6 61 3-71 48-108 (109)
3 2d87_A Smoothelin splice isofo 99.8 8.1E-21 2.8E-25 124.5 5.2 62 3-71 52-113 (128)
4 1wyl_A NEDD9 interacting prote 99.8 9.7E-21 3.3E-25 122.0 4.4 60 3-71 52-111 (116)
5 1wyq_A Spectrin beta chain, br 99.8 2.8E-20 9.7E-25 121.6 5.8 61 3-71 52-112 (127)
6 1bhd_A Utrophin; calponin homo 99.8 1.5E-20 5E-25 121.6 2.5 62 3-72 53-114 (118)
7 2d89_A EHBP1 protein; all alph 99.8 4.9E-20 1.7E-24 119.1 4.8 61 3-71 54-114 (119)
8 4b7l_A Filamin-B; structural p 99.7 6.8E-18 2.3E-22 124.4 4.0 59 5-71 185-243 (347)
9 1wku_A Alpha-actinin 3; calpon 99.7 2.7E-17 9.3E-22 116.5 5.2 62 3-71 185-246 (254)
10 3hoc_A Filamin-A; calponin hom 99.6 4.4E-17 1.5E-21 117.5 3.4 56 5-68 215-270 (272)
11 2wa7_A Filamin-B; disease muta 99.6 9.3E-17 3.2E-21 112.9 4.9 56 5-68 188-243 (245)
12 3f7p_A Plectin-1; plakin, hemi 99.6 7.5E-17 2.6E-21 117.6 3.6 61 3-71 234-294 (296)
13 1sh5_A Plectin 1, PLTN, PCN; a 99.6 6.8E-16 2.3E-20 108.0 2.8 61 3-71 178-238 (245)
14 1dxx_A Dystrophin; structural 99.5 1.8E-15 6.2E-20 106.2 2.9 62 3-72 180-242 (246)
15 1sjj_A Actinin; 3-helix bundle 99.5 1.6E-15 5.6E-20 118.4 2.4 62 3-71 166-227 (863)
16 1pxy_A Fimbrin-like protein; c 99.3 6.5E-13 2.2E-17 100.9 4.8 59 3-72 444-506 (506)
17 1aoa_A T-fimbrin; actin-bindin 99.3 1.4E-12 4.7E-17 92.7 4.0 54 3-67 222-275 (275)
18 1rt8_A Fimbrin; filamentous ac 99.2 4.3E-12 1.5E-16 96.7 4.2 58 3-71 207-264 (513)
19 1rt8_A Fimbrin; filamentous ac 99.2 1.3E-11 4.5E-16 94.0 3.7 54 3-67 455-512 (513)
20 1pxy_A Fimbrin-like protein; c 99.1 2.8E-11 9.6E-16 92.0 4.3 58 3-71 198-255 (506)
21 1wjo_A T-plastin; CH domain, a 99.0 8.3E-11 2.8E-15 77.2 2.9 57 4-71 55-116 (124)
22 2yrn_A Neuron navigator 2 isof 83.3 2 7E-05 26.7 4.5 51 11-72 75-126 (129)
23 2vzc_A Alpha-parvin; membrane, 82.1 2.1 7.3E-05 27.1 4.3 48 12-70 80-128 (131)
24 1wyo_A Protein EB3, microtubul 56.8 11 0.00039 25.0 3.5 54 3-64 67-120 (159)
25 3hoc_A Filamin-A; calponin hom 55.1 17 0.00057 25.6 4.3 46 14-70 106-152 (272)
26 2wa7_A Filamin-B; disease muta 54.8 17 0.00059 24.7 4.2 46 14-70 79-125 (245)
27 2qjz_A Microtubule-associated 49.3 9 0.00031 24.3 1.9 56 3-66 50-105 (123)
28 1wku_A Alpha-actinin 3; calpon 44.9 25 0.00084 24.1 3.8 46 13-69 83-129 (254)
29 1aoa_A T-fimbrin; actin-bindin 37.2 48 0.0016 22.7 4.3 45 13-68 92-137 (275)
30 4b7l_A Filamin-B; structural p 36.6 46 0.0016 23.9 4.2 47 14-70 76-122 (347)
31 3f7p_A Plectin-1; plakin, hemi 36.3 50 0.0017 23.5 4.3 46 13-69 128-174 (296)
32 3nrt_A Putative ryanodine rece 30.6 25 0.00084 21.6 1.7 25 2-26 66-90 (103)
33 4dh4_A MIF; trimer, isomerase; 27.7 41 0.0014 19.8 2.3 21 13-33 72-92 (114)
34 3djh_A Macrophage migration in 27.6 40 0.0014 19.9 2.3 19 15-33 73-91 (114)
35 1h67_A Calponin alpha; cytoske 27.0 72 0.0024 19.0 3.4 43 13-65 57-101 (108)
36 1sjj_A Actinin; 3-helix bundle 24.7 65 0.0022 25.0 3.5 47 12-69 63-110 (863)
37 3b64_A Macrophage migration in 24.3 71 0.0024 18.5 3.0 24 10-33 69-92 (112)
38 1wyn_A Calponin-2; CH domain, 23.1 1.5E+02 0.005 18.7 4.5 43 13-65 71-115 (146)
39 2xcz_A Possible ATLS1-like lig 23.1 79 0.0027 18.3 3.0 25 9-33 68-92 (115)
40 3fwt_A Macrophage migration in 22.0 68 0.0023 19.7 2.6 25 9-33 89-113 (133)
41 1wyp_A Calponin 1; CH domain, 21.3 1.6E+02 0.0053 18.3 4.3 43 13-65 71-115 (136)
42 1hfo_A Migration inhibitory fa 20.3 77 0.0026 18.3 2.5 20 14-33 72-91 (113)
43 3t5s_A Gilaa.00834.A, macropha 20.1 81 0.0028 19.5 2.7 25 9-33 89-113 (135)
No 1
>2d88_A Protein mical-3; all alpha, calponin homology domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2e9k_A
Probab=99.84 E-value=2e-21 Score=126.06 Aligned_cols=62 Identities=44% Similarity=0.799 Sum_probs=59.1
Q ss_pred CCCccCCCccCHHhhHHHHHHHHHHhcCCchhhhhhhccCCcccccccCCCCchhHHHHHHHHHHhhhc
Q psy6951 3 KDDFASLDQRNIYSNNELAFRTAERHLGIPALLDARESVLDAEDMVEYAVPDRLSILTYLSQFYQVFVN 71 (72)
Q Consensus 3 ~id~~sl~~~~~~~N~~lAf~~Ae~~lGIp~lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~f~~ 71 (72)
+|||++|++++..+|+++||++||++||||++|+ ||||+....||++||||||++||++|++
T Consensus 54 lid~~~l~~~~~~~n~~~af~~Ae~~lgi~~lL~-------peD~~~~~~pD~ksimtYvs~l~~~~~~ 115 (121)
T 2d88_A 54 LIDFDSLDEQNVEKNNQLAFDIAEKELGISPIMT-------GKEMASVGEPDKLSMVMYLTQFYEMFKD 115 (121)
T ss_dssp TSCTTTSCTTCHHHHHHHHHHHHHHHTCCCCSSC-------HHHHHHSSCCCHHHHHHHHHHHHHHHSS
T ss_pred cCCHHHcCccCHHHHHHHHHHHHHHHcCCCCcCC-------HHHHhccCCCcHHHHHHHHHHHHHHccc
Confidence 5799999999999999999999999999999999 9999866899999999999999999986
No 2
>1bkr_A Spectrin beta chain; filamentous actin-binding domain, cytoskeleton; 1.10A {Homo sapiens} SCOP: a.40.1.1 PDB: 1aa2_A
Probab=99.84 E-value=2.5e-21 Score=123.60 Aligned_cols=61 Identities=41% Similarity=0.627 Sum_probs=57.9
Q ss_pred CCCccCCCccCHHhhHHHHHHHHHHhcCCchhhhhhhccCCcccccccCCCCchhHHHHHHHHHHhhhc
Q psy6951 3 KDDFASLDQRNIYSNNELAFRTAERHLGIPALLDARESVLDAEDMVEYAVPDRLSILTYLSQFYQVFVN 71 (72)
Q Consensus 3 ~id~~sl~~~~~~~N~~lAf~~Ae~~lGIp~lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~f~~ 71 (72)
+|||++|+++++.+|+++||++||++||||++|+ ||||+ .+.||++||||||++||++|++
T Consensus 48 lid~~~l~~~~~~~n~~~af~~Ae~~lgi~~ll~-------~eDv~-~~~pD~ksi~tYvs~~~~~f~~ 108 (109)
T 1bkr_A 48 LIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLD-------PEDIS-VDHPDEKSIITYVVTYYHYFSK 108 (109)
T ss_dssp GCCGGGCCTTCHHHHHHHHHHHHHHHHCCCCCCC-------HHHHS-SSSCCHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHcCcCCHHHHHHHHHHHHHHHcCCCccCC-------HHHcc-CCCCcHHHHHHHHHHHHHHhhc
Confidence 5799999999999999999999999999999999 99994 5899999999999999999986
No 3
>2d87_A Smoothelin splice isoform L2; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2jv9_A 2k3s_A
Probab=99.82 E-value=8.1e-21 Score=124.50 Aligned_cols=62 Identities=40% Similarity=0.653 Sum_probs=59.0
Q ss_pred CCCccCCCccCHHhhHHHHHHHHHHhcCCchhhhhhhccCCcccccccCCCCchhHHHHHHHHHHhhhc
Q psy6951 3 KDDFASLDQRNIYSNNELAFRTAERHLGIPALLDARESVLDAEDMVEYAVPDRLSILTYLSQFYQVFVN 71 (72)
Q Consensus 3 ~id~~sl~~~~~~~N~~lAf~~Ae~~lGIp~lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~f~~ 71 (72)
+|||++|++++..+|+++||++||++||||++|+ ||||++...||++||||||++||++|.+
T Consensus 52 lid~~~l~~~~~~~n~~~af~~Ae~~lgip~lL~-------peD~v~~~~pD~ksvmtYvs~l~~~~~~ 113 (128)
T 2d87_A 52 AFDYGQLSPQNRRQNFEVAFSSAETHADCPQLLD-------TEDMVRLREPDWKCVYTYIQEFYRCLVQ 113 (128)
T ss_dssp TSCSTTSCSSCHHHHHHHHHHHHHHHHCCCCCSC-------HHHHHHSSSCCHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHcCccCHHHHHHHHHHHHHHcCCCCcccC-------HHHHhccCCccHHHHHHHHHHHHHHHhh
Confidence 5799999999999999999999999999999999 9999887889999999999999999964
No 4
>1wyl_A NEDD9 interacting protein with calponin homology and LIM domains; CH domain, mical, structural genomics; NMR {Homo sapiens} PDB: 2dk9_A
Probab=99.81 E-value=9.7e-21 Score=121.97 Aligned_cols=60 Identities=27% Similarity=0.413 Sum_probs=56.8
Q ss_pred CCCccCCCccCHHhhHHHHHHHHHHhcCCchhhhhhhccCCcccccccCCCCchhHHHHHHHHHHhhhc
Q psy6951 3 KDDFASLDQRNIYSNNELAFRTAERHLGIPALLDARESVLDAEDMVEYAVPDRLSILTYLSQFYQVFVN 71 (72)
Q Consensus 3 ~id~~sl~~~~~~~N~~lAf~~Ae~~lGIp~lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~f~~ 71 (72)
+|||++|+++++.+|+++||++||++||||++|+ ||||+.. ||++||||||++||++|++
T Consensus 52 lid~~~l~~~~~~~n~~~af~~Ae~~lgi~~lL~-------peD~~~~--~d~ksv~tYvs~l~~~~~~ 111 (116)
T 1wyl_A 52 LLEPSELQGLGALEATAWALKVAENELGITPVVS-------AQAVVAG--SDPLGLIAYLSHFHSAFKS 111 (116)
T ss_dssp SCCCSSGGGCCHHHHHHHHHHHHHHTTCCCCCSC-------HHHHHHT--SCHHHHHHHHHHHHHHSCC
T ss_pred CCCHHHhccCCHHHHHHHHHHHHHHHcCCccccC-------HHHHhcC--CchhHHHHHHHHHHHHccC
Confidence 5799999999999999999999999999999999 9999753 9999999999999999976
No 5
>1wyq_A Spectrin beta chain, brain 2; NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens}
Probab=99.81 E-value=2.8e-20 Score=121.64 Aligned_cols=61 Identities=41% Similarity=0.607 Sum_probs=57.7
Q ss_pred CCCccCCCccCHHhhHHHHHHHHHHhcCCchhhhhhhccCCcccccccCCCCchhHHHHHHHHHHhhhc
Q psy6951 3 KDDFASLDQRNIYSNNELAFRTAERHLGIPALLDARESVLDAEDMVEYAVPDRLSILTYLSQFYQVFVN 71 (72)
Q Consensus 3 ~id~~sl~~~~~~~N~~lAf~~Ae~~lGIp~lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~f~~ 71 (72)
+|||++|++++..+|+++||++||++||||++|+ ||||+ .+.||++||||||++||++|++
T Consensus 52 lid~~~l~~~~~~~n~~~af~~Ae~~Lgi~~ll~-------~eDv~-~~~pDeksimtYvs~l~~~~~~ 112 (127)
T 1wyq_A 52 LLDFESLKKCNAHYNLQNAFNLAEKELGLTKLLD-------PEDVN-VDQPDEKSIITYVATYYHYFSK 112 (127)
T ss_dssp TCCTTTSCSSCCHHHHHHHHHHHHHTTCCCCCSC-------TTTSC-SSSCCHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHhCcCCHHHHHHHHHHHHHHHcCCCcccC-------HHHhc-cCCCcHHHHHHHHHHHHHHhhc
Confidence 5799999999999999999999999999999999 99994 5899999999999999999975
No 6
>1bhd_A Utrophin; calponin homology, actin binding, structural protein; 2.00A {Homo sapiens} SCOP: a.40.1.1
Probab=99.79 E-value=1.5e-20 Score=121.60 Aligned_cols=62 Identities=32% Similarity=0.491 Sum_probs=56.2
Q ss_pred CCCccCCCccCHHhhHHHHHHHHHHhcCCchhhhhhhccCCcccccccCCCCchhHHHHHHHHHHhhhcC
Q psy6951 3 KDDFASLDQRNIYSNNELAFRTAERHLGIPALLDARESVLDAEDMVEYAVPDRLSILTYLSQFYQVFVNQ 72 (72)
Q Consensus 3 ~id~~sl~~~~~~~N~~lAf~~Ae~~lGIp~lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~f~~~ 72 (72)
+|||+++++++..+|+++||++||++||||++|+ ||||+ .+.||++||||||++||++|+++
T Consensus 53 lid~~~l~~~~~~~n~~~af~~Ae~~lgi~~ll~-------~eDv~-~~~pD~ksvmtYvs~l~~~~~~~ 114 (118)
T 1bhd_A 53 LFSWDKVVKMSPIERLEHAFSKAQTYLGIEKLLD-------PEDVA-VRLPDKKSIIMYLTSLFEVLPQQ 114 (118)
T ss_dssp GSCHHHHHHSCHHHHHHHHHHHHHHHHCCCCCSC-------HHHHH-TSCCCHHHHHHHHHHHHHHC---
T ss_pred cCCHHHhCcCCHHHHHHHHHHHHHHHcCCCcccC-------HHHhh-cCCCcHHHHHHHHHHHHHHCcCC
Confidence 5799999999999999999999999999999999 99995 57899999999999999999864
No 7
>2d89_A EHBP1 protein; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=4.9e-20 Score=119.11 Aligned_cols=61 Identities=38% Similarity=0.613 Sum_probs=57.5
Q ss_pred CCCccCCCccCHHhhHHHHHHHHHHhcCCchhhhhhhccCCcccccccCCCCchhHHHHHHHHHHhhhc
Q psy6951 3 KDDFASLDQRNIYSNNELAFRTAERHLGIPALLDARESVLDAEDMVEYAVPDRLSILTYLSQFYQVFVN 71 (72)
Q Consensus 3 ~id~~sl~~~~~~~N~~lAf~~Ae~~lGIp~lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~f~~ 71 (72)
+|||+++++++..+|+++||++| ++||||++|+ ||||++...||++||||||++||++|++
T Consensus 54 lid~~~l~~~~~~~n~~~af~~a-~~LGi~~ll~-------peDi~~~~~pD~ksvmtYvs~l~~~f~~ 114 (119)
T 2d89_A 54 LIDYKSLNPQDIKENNKKAYDGF-ASIGISRLLE-------PSDMVLLAIPDKLTVMTYLYQIRAHFSS 114 (119)
T ss_dssp TSCGGGCCTTCSHHHHHHHHHHH-HHHTCCCCSC-------HHHHHHSSSCCHHHHHHHHHHHHHHHSC
T ss_pred cCChhhhcccCHHHHHHHHHHHH-HHhCCCcccC-------HHHHhccCCCcHHHHHHHHHHHHHHccC
Confidence 57999999999999999999999 5899999999 9999877789999999999999999986
No 8
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=99.70 E-value=6.8e-18 Score=124.42 Aligned_cols=59 Identities=31% Similarity=0.527 Sum_probs=55.8
Q ss_pred CccCCCccCHHhhHHHHHHHHHHhcCCchhhhhhhccCCcccccccCCCCchhHHHHHHHHHHhhhc
Q psy6951 5 DFASLDQRNIYSNNELAFRTAERHLGIPALLDARESVLDAEDMVEYAVPDRLSILTYLSQFYQVFVN 71 (72)
Q Consensus 5 d~~sl~~~~~~~N~~lAf~~Ae~~lGIp~lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~f~~ 71 (72)
||+++++++..+|+++||++||++||||++|+ ||||+. ..||++|||||||+||+++.+
T Consensus 185 d~~~l~~~~~~~n~~~Af~~Ae~~lGip~ll~-------peDi~~-~~pDeksimtYvs~~~~~~~~ 243 (347)
T 4b7l_A 185 DWESWDPQKPVDNAREAMQQADDWLGVPQVIT-------PEEIIH-PDVDEHSVMTYLSQFPKAKLK 243 (347)
T ss_dssp TGGGSCTTCHHHHHHHHHHHHHHHHCCCCSSC-------HHHHTC-TTCCHHHHHHHHTTGGGCCCC
T ss_pred chhhcCcCCHHHHHHHHHHHHHHhcCCCcccC-------HHHcCC-CCCChhHHHHHHHHHhhhccC
Confidence 89999999999999999999999999999999 999975 689999999999999998754
No 9
>1wku_A Alpha-actinin 3; calponin homology domain, actin binding domain, contractIle protein; 1.60A {Homo sapiens} PDB: 1tjt_A 2r0o_A 2eyi_A 2eyn_A 3lue_K
Probab=99.68 E-value=2.7e-17 Score=116.49 Aligned_cols=62 Identities=42% Similarity=0.658 Sum_probs=59.0
Q ss_pred CCCccCCCccCHHhhHHHHHHHHHHhcCCchhhhhhhccCCcccccccCCCCchhHHHHHHHHHHhhhc
Q psy6951 3 KDDFASLDQRNIYSNNELAFRTAERHLGIPALLDARESVLDAEDMVEYAVPDRLSILTYLSQFYQVFVN 71 (72)
Q Consensus 3 ~id~~sl~~~~~~~N~~lAf~~Ae~~lGIp~lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~f~~ 71 (72)
.+||+.+++.+..+|+++||++|+++||||++++ ||||++...||++||||||++||++|++
T Consensus 185 ~id~~~l~~~~~~~n~~~a~~~A~~~lGi~~~l~-------peDiv~~~~pD~k~imtyva~l~~~~~~ 246 (254)
T 1wku_A 185 LIDYAKLRKDDPIGNLNTAFEVAEKYLDIPKMLD-------AEDIVNTPKPDEKAIMTYVSCFYHAFAG 246 (254)
T ss_dssp SCCGGGCCTTCHHHHHHHHHHHHHHHSCCCCCSC-------HHHHHHSSSCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccCcCCHHHHHHHHHHHHHHHcCCCCcCC-------HHHHhccCCCcHHHHHHHHHHHHHHhhc
Confidence 5799999999999999999999999999999999 9999887889999999999999999975
No 10
>3hoc_A Filamin-A; calponin homology domain, actin binding domain, acetylation, actin-binding, alternative splicing, cytoplasm, cytoskeleton; 2.30A {Homo sapiens} PDB: 3hop_A 3hor_A
Probab=99.65 E-value=4.4e-17 Score=117.46 Aligned_cols=56 Identities=36% Similarity=0.592 Sum_probs=52.1
Q ss_pred CccCCCccCHHhhHHHHHHHHHHhcCCchhhhhhhccCCcccccccCCCCchhHHHHHHHHHHh
Q psy6951 5 DFASLDQRNIYSNNELAFRTAERHLGIPALLDARESVLDAEDMVEYAVPDRLSILTYLSQFYQV 68 (72)
Q Consensus 5 d~~sl~~~~~~~N~~lAf~~Ae~~lGIp~lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~ 68 (72)
||+.+++++..+|+++||++||++||||++++ ||||+. ..||++||||||++||++
T Consensus 215 d~~~l~~~~~~~n~~~Af~~Ae~~lGi~~ll~-------peDiv~-~~pD~ksimtYvs~~~~a 270 (272)
T 3hoc_A 215 DWDSWDASKPVTNAREAMQQADDWLGIPQVIT-------PEEIVD-PNVDKHSVMTYLSQFPKA 270 (272)
T ss_dssp TGGGSCTTCHHHHHHHHHHHHHHHHCCCCSSC-------HHHHTC-TTCCHHHHHHHHTTCC--
T ss_pred chhhcCccCHHHHHHHHHHHHHHhCCCCccCC-------HHHhcc-CCCChHHHHHHHHHhhcc
Confidence 89999999999999999999999999999999 999976 589999999999999975
No 11
>2wa7_A Filamin-B; disease mutation, skeletal dysplasia, structural protein, actin-crosslinking, myogenesis, cytoskeleton; 1.85A {Homo sapiens} PDB: 2wa5_A 2wa6_A 3fer_A
Probab=99.65 E-value=9.3e-17 Score=112.91 Aligned_cols=56 Identities=32% Similarity=0.551 Sum_probs=53.5
Q ss_pred CccCCCccCHHhhHHHHHHHHHHhcCCchhhhhhhccCCcccccccCCCCchhHHHHHHHHHHh
Q psy6951 5 DFASLDQRNIYSNNELAFRTAERHLGIPALLDARESVLDAEDMVEYAVPDRLSILTYLSQFYQV 68 (72)
Q Consensus 5 d~~sl~~~~~~~N~~lAf~~Ae~~lGIp~lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~ 68 (72)
||+.+++.+..+|++.||++|+++||||++++ ||||+. +.||++|||||||+||++
T Consensus 188 ~~~~l~~~~~~~n~~~a~~~A~~~lGi~~~l~-------peDi~~-~~~d~ksi~tyvs~~~~~ 243 (245)
T 2wa7_A 188 DWESWDPQKPVDNAREAVQQADDWLGVPQVIT-------PEEIIH-PDVDEHSVMTYLSQFPKA 243 (245)
T ss_dssp TGGGSCTTCHHHHHHHHHHHHHHHSCCCCSSC-------HHHHTC-TTCCHHHHHHHHTHHHHC
T ss_pred cccccCcccHHHHHHHHHHHHHHhCCCCccCC-------HHHhcc-CCCcHHHHHHHHHHHhcc
Confidence 89999999999999999999999999999999 999976 789999999999999985
No 12
>3f7p_A Plectin-1; plakin, hemidesmosome, cell adhesion, epidermolysis bullosa, actin-binding, alternative splicing, coiled coil, cytoplasm; 2.75A {Homo sapiens}
Probab=99.64 E-value=7.5e-17 Score=117.59 Aligned_cols=61 Identities=36% Similarity=0.537 Sum_probs=56.6
Q ss_pred CCCccCCCccCHHhhHHHHHHHHHHhcCCchhhhhhhccCCcccccccCCCCchhHHHHHHHHHHhhhc
Q psy6951 3 KDDFASLDQRNIYSNNELAFRTAERHLGIPALLDARESVLDAEDMVEYAVPDRLSILTYLSQFYQVFVN 71 (72)
Q Consensus 3 ~id~~sl~~~~~~~N~~lAf~~Ae~~lGIp~lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~f~~ 71 (72)
+|||+.+++.+..+|+++||++||++||||++++ |||++ ...||++||||||++||++|++
T Consensus 234 lid~~~l~~~~~~~N~~~Af~~Ae~~LGi~~ll~-------pEDi~-~~~pDeksimtyvs~ly~~fp~ 294 (296)
T 3f7p_A 234 LIDMNKVYRQTNLENLDQAFSVAERDLGVTRLLD-------PEDVD-VPQPDEKSIITYVSSLYDAMPR 294 (296)
T ss_dssp GCCHHHHTTSCHHHHHHHHHHHHHHHHCCCCCCC-------HHHHS-SSSCCHHHHHHHHHHHHHTCC-
T ss_pred ccCHHHcCcccHHHHHHHHHHHHHHhCCCCccCC-------HHHhc-CCCCcHHHHHHHHHHHHHHCcC
Confidence 5799999999999999999999999999999999 99985 4789999999999999999974
No 13
>1sh5_A Plectin 1, PLTN, PCN; actin-binding domain, calponin-homology domain, structural protein; 2.00A {Mus musculus} SCOP: a.40.1.1 a.40.1.1 PDB: 1sh6_A 1mb8_A
Probab=99.57 E-value=6.8e-16 Score=108.02 Aligned_cols=61 Identities=36% Similarity=0.537 Sum_probs=55.8
Q ss_pred CCCccCCCccCHHhhHHHHHHHHHHhcCCchhhhhhhccCCcccccccCCCCchhHHHHHHHHHHhhhc
Q psy6951 3 KDDFASLDQRNIYSNNELAFRTAERHLGIPALLDARESVLDAEDMVEYAVPDRLSILTYLSQFYQVFVN 71 (72)
Q Consensus 3 ~id~~sl~~~~~~~N~~lAf~~Ae~~lGIp~lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~f~~ 71 (72)
.+||+.+++.+..+|++.||++|+++||||++++ |||++ ...||++||||||++||++|++
T Consensus 178 ~i~~~~l~~~~~~~n~~~a~~~a~~~lGi~~~l~-------peDi~-~~~pd~k~i~tyva~l~~~~~~ 238 (245)
T 1sh5_A 178 LIDMNKVYRQTNLENLDQAFSVAERDLGVTRLLD-------PEDVD-VPQPDEKSIITYVSSLYDAMPR 238 (245)
T ss_dssp TCCHHHHHHSCHHHHHHHHHHHHHHHHCCCCCCC-------HHHHS-SSSCCHHHHHHHHHHHHHHCC-
T ss_pred CCCHHHcccCCHHHHHHHHHHHHHHhCCCCccCC-------HHHhc-cCCCcHHHHHHHHHHHHHHcCC
Confidence 4788889899999999999999999999999999 99995 4689999999999999999875
No 14
>1dxx_A Dystrophin; structural protein, muscular dystrophy, calponin homology domain, actin-binding, utrophin; 2.6A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1 PDB: 1qag_A
Probab=99.54 E-value=1.8e-15 Score=106.22 Aligned_cols=62 Identities=39% Similarity=0.529 Sum_probs=56.1
Q ss_pred CCCccCCC-ccCHHhhHHHHHHHHHHhcCCchhhhhhhccCCcccccccCCCCchhHHHHHHHHHHhhhcC
Q psy6951 3 KDDFASLD-QRNIYSNNELAFRTAERHLGIPALLDARESVLDAEDMVEYAVPDRLSILTYLSQFYQVFVNQ 72 (72)
Q Consensus 3 ~id~~sl~-~~~~~~N~~lAf~~Ae~~lGIp~lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~f~~~ 72 (72)
++||+++. +++..+|++.||++|++++|||++++ |||++ ...||++||||||+++|++|+++
T Consensus 180 li~~~~~~~~~~~~~n~~~a~~~A~~~lGi~~~l~-------peDi~-~~~pD~k~i~tyva~l~~~~~~~ 242 (246)
T 1dxx_A 180 LFDWNSVVSQQSATQRLEHAFNIARYQLGIEKLLD-------PEDVD-TTYPDKKSILMYITSLFQVLPQQ 242 (246)
T ss_dssp GSCHHHHHTCCCHHHHHHHHHHHHHHTTCCCCCCC-------HHHHS-SSSCCHHHHHHHHHHHHTTSCCC
T ss_pred ccchhhhcccCCHHHHHHHHHHHHHHhCCCCccCC-------HHHhh-cCCCcHHHHHHHHHHHHHHccCC
Confidence 46788876 78999999999999999999999999 99996 47999999999999999999864
No 15
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.53 E-value=1.6e-15 Score=118.37 Aligned_cols=62 Identities=42% Similarity=0.662 Sum_probs=58.9
Q ss_pred CCCccCCCccCHHhhHHHHHHHHHHhcCCchhhhhhhccCCcccccccCCCCchhHHHHHHHHHHhhhc
Q psy6951 3 KDDFASLDQRNIYSNNELAFRTAERHLGIPALLDARESVLDAEDMVEYAVPDRLSILTYLSQFYQVFVN 71 (72)
Q Consensus 3 ~id~~sl~~~~~~~N~~lAf~~Ae~~lGIp~lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~f~~ 71 (72)
.|||+++++.++.+|++.||++|+++||||++++ ||||++.+.||++||||||++||++|.+
T Consensus 166 ~~~~~~~~~~~~~~n~~~a~~~a~~~lg~~~~l~-------~ed~~~~~~pd~~~~~~y~~~l~~~~~~ 227 (863)
T 1sjj_A 166 LIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLD-------AEDIVGTARPDEKAIMTYVSSFYHAFSG 227 (863)
T ss_dssp SSCSGGGGSCCCGGGCTHHHHHHHHHHCCCCSCC-------HHHHTTCSSCCHHHHHHHHHHTTTTTCC
T ss_pred CcChhhCCCCCHHHHHHHHHHHHHHhCCCCCccC-------HHHHhCCCCCcHHHHHHHHHHHHHHhcc
Confidence 5799999999999999999999999999999999 9999887899999999999999999975
No 16
>1pxy_A Fimbrin-like protein; calponin homology, F-actin-binding domain (ABD), F-actin- crosslinking, structural genomics; 2.40A {Arabidopsis thaliana} SCOP: a.40.1.1 PDB: 3byh_B
Probab=99.34 E-value=6.5e-13 Score=100.95 Aligned_cols=59 Identities=17% Similarity=0.171 Sum_probs=53.0
Q ss_pred CCCccCCCcc----CHHhhHHHHHHHHHHhcCCchhhhhhhccCCcccccccCCCCchhHHHHHHHHHHhhhcC
Q psy6951 3 KDDFASLDQR----NIYSNNELAFRTAERHLGIPALLDARESVLDAEDMVEYAVPDRLSILTYLSQFYQVFVNQ 72 (72)
Q Consensus 3 ~id~~sl~~~----~~~~N~~lAf~~Ae~~lGIp~lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~f~~~ 72 (72)
++||+.+.+. +.++|++.||++|+ +||||++++ ||||+ .||++|||||+++||.+|.+|
T Consensus 444 li~~~~l~~~~s~~~~~~N~~~a~~~a~-~lGi~~~l~-------peDi~---~~d~ksi~tyv~~l~~~~~~~ 506 (506)
T 1pxy_A 444 VVNWNLVTKGETDDEKRLNATYIVSVAR-KLGCSVFLL-------PEDIV---EVNQKMILILTASIMYWSLQR 506 (506)
T ss_dssp GCCTTSCCCSCSHHHHHHHHHHHHHHHH-HHTCCCCCC-------HHHHH---TTCHHHHHHHHHHHHHHHTTC
T ss_pred eeehhhcccCCCchhHHHHHHHHHHHHH-HcCCCCcCC-------HHHcc---CCChhHHHHHHHHHHHHHhhC
Confidence 4699999874 67999999999996 799999999 99997 369999999999999999876
No 17
>1aoa_A T-fimbrin; actin-binding protein, calcium-binding, phosphorylation; 2.40A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1
Probab=99.30 E-value=1.4e-12 Score=92.66 Aligned_cols=54 Identities=13% Similarity=0.318 Sum_probs=50.4
Q ss_pred CCCccCCCccCHHhhHHHHHHHHHHhcCCchhhhhhhccCCcccccccCCCCchhHHHHHHHHHH
Q psy6951 3 KDDFASLDQRNIYSNNELAFRTAERHLGIPALLDARESVLDAEDMVEYAVPDRLSILTYLSQFYQ 67 (72)
Q Consensus 3 ~id~~sl~~~~~~~N~~lAf~~Ae~~lGIp~lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~~~ 67 (72)
.+||+.+++++..+|.+.||++|+ +||||++++ ||||+ .||+++||||++++|+
T Consensus 222 ~~~~~~~~~~~~~~n~~~a~~~A~-~lGi~~~l~-------peDi~---~~~~k~i~tyva~Lfn 275 (275)
T 1aoa_A 222 DINMSGFNETDDLKRAESMLQQAD-KLGCRQFVT-------PADVV---SGNPKLNLAFVANLFN 275 (275)
T ss_dssp CCCCTTTTCSSHHHHHHHHHHHHT-TTTCCCSCC-------HHHHH---TTCHHHHHHHHHHHHC
T ss_pred cccccCCCccCHHHHHHHHHHHHH-HcCCCCcCC-------HHHcC---CCChhHHHHHHHHHhC
Confidence 479999999999999999999998 799999999 99997 5899999999999984
No 18
>1rt8_A Fimbrin; filamentous actin binding domain (ABD), calponin homology, actin-crosslinking, structural protein; 2.00A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=99.24 E-value=4.3e-12 Score=96.69 Aligned_cols=58 Identities=17% Similarity=0.265 Sum_probs=53.4
Q ss_pred CCCccCCCccCHHhhHHHHHHHHHHhcCCchhhhhhhccCCcccccccCCCCchhHHHHHHHHHHhhhc
Q psy6951 3 KDDFASLDQRNIYSNNELAFRTAERHLGIPALLDARESVLDAEDMVEYAVPDRLSILTYLSQFYQVFVN 71 (72)
Q Consensus 3 ~id~~sl~~~~~~~N~~lAf~~Ae~~lGIp~lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~f~~ 71 (72)
.+||+.+++++..+|++.||++|++ +|||++++ ||||+. ||++|+||||+++|++|++
T Consensus 207 ~i~~~~l~~~~~~~n~~~a~~~a~~-lgi~~~l~-------peDi~~---~~~k~il~yva~l~~~~~~ 264 (513)
T 1rt8_A 207 LCSRAPLQTTDVLQRAEQVLQNAEK-LDCRKYLT-------PTAMVA---GNPKLNLAFVAHLFNTHPG 264 (513)
T ss_dssp TCCSGGGGCCCHHHHHHHHHHHHHT-TTCCCSCC-------HHHHHT---TCHHHHHHHHHHHHHHCCC
T ss_pred ccccCCCCccCHHHHHHHHHHHHHH-cCCCccCC-------HHHhcC---CCHHHHHHHHHHHHhhhcc
Confidence 4689999999999999999999996 99999999 999973 7899999999999999875
No 19
>1rt8_A Fimbrin; filamentous actin binding domain (ABD), calponin homology, actin-crosslinking, structural protein; 2.00A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=99.16 E-value=1.3e-11 Score=94.03 Aligned_cols=54 Identities=20% Similarity=0.289 Sum_probs=47.4
Q ss_pred CCCccCCCcc----CHHhhHHHHHHHHHHhcCCchhhhhhhccCCcccccccCCCCchhHHHHHHHHHH
Q psy6951 3 KDDFASLDQR----NIYSNNELAFRTAERHLGIPALLDARESVLDAEDMVEYAVPDRLSILTYLSQFYQ 67 (72)
Q Consensus 3 ~id~~sl~~~----~~~~N~~lAf~~Ae~~lGIp~lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~~~ 67 (72)
.+||+.+.+. +.++|++.||++|+ +||||++++ ||||+.. +++||||||++||.
T Consensus 455 ~i~~~~l~~~~~~~~~~~n~~~af~~A~-~lGi~~~l~-------peDi~~~---~pksi~tyva~l~~ 512 (513)
T 1rt8_A 455 YVDYNLVTDGSTEELAIQNARLAISIAR-KLGAVIFIL-------PEDIVAV---RPRLVLHFIGSLMA 512 (513)
T ss_dssp GCCGGGCCCCCSHHHHHHHHHHHHHHHH-HTTCCCCCC-------HHHHHTT---CHHHHHHHHHHHHT
T ss_pred cCCHHhhccccChhhHHHHHHHHHHHHH-HcCCCccCC-------HHHhcCC---CcccHHHHHHHHHh
Confidence 4789998764 79999999999997 599999999 9999753 45999999999986
No 20
>1pxy_A Fimbrin-like protein; calponin homology, F-actin-binding domain (ABD), F-actin- crosslinking, structural genomics; 2.40A {Arabidopsis thaliana} SCOP: a.40.1.1 PDB: 3byh_B
Probab=99.13 E-value=2.8e-11 Score=91.97 Aligned_cols=58 Identities=26% Similarity=0.348 Sum_probs=52.5
Q ss_pred CCCccCCCccCHHhhHHHHHHHHHHhcCCchhhhhhhccCCcccccccCCCCchhHHHHHHHHHHhhhc
Q psy6951 3 KDDFASLDQRNIYSNNELAFRTAERHLGIPALLDARESVLDAEDMVEYAVPDRLSILTYLSQFYQVFVN 71 (72)
Q Consensus 3 ~id~~sl~~~~~~~N~~lAf~~Ae~~lGIp~lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~f~~ 71 (72)
.+||+.+++++..+|++.||++|+ ++|||++++ ||||+. ++++++||||+++|++|++
T Consensus 198 ~i~~~~l~~~~~~~n~~~a~~~a~-~lGi~~~l~-------peDi~~---~~~k~v~tyva~l~~~~~~ 255 (506)
T 1pxy_A 198 HCDPATLDAKDPLERAELVLSHAE-RMNCKRYLT-------AEEIVE---GSSTLNLAFVAQIFHERNG 255 (506)
T ss_dssp GCCGGGGGCCSHHHHHHHHHHHHH-HTTCCCCCC-------HHHHHT---TCHHHHHHHHHHHHHHCCC
T ss_pred ccccccCCcCCHHHHHHHHHHHHH-HcCCCCcCC-------HHHHhc---CChhHHHHHHHHHhhhcCC
Confidence 468999999999999999999998 599999999 999974 4668999999999999875
No 21
>1wjo_A T-plastin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: a.40.1.1 PDB: 2d85_A
Probab=99.04 E-value=8.3e-11 Score=77.15 Aligned_cols=57 Identities=18% Similarity=0.225 Sum_probs=49.6
Q ss_pred CCcc-----CCCccCHHhhHHHHHHHHHHhcCCchhhhhhhccCCcccccccCCCCchhHHHHHHHHHHhhhc
Q psy6951 4 DDFA-----SLDQRNIYSNNELAFRTAERHLGIPALLDARESVLDAEDMVEYAVPDRLSILTYLSQFYQVFVN 71 (72)
Q Consensus 4 id~~-----sl~~~~~~~N~~lAf~~Ae~~lGIp~lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~f~~ 71 (72)
+||+ .|+..+..+|.+.||++|+ ++||+.++. |||+++. ++++||||++++++...+
T Consensus 55 vd~~lv~~~~L~~~d~~~Na~~ais~Ar-klG~~~~l~-------pEDIve~---~pK~ilt~va~l~~~~~~ 116 (124)
T 1wjo_A 55 INYDLVKSGNLTEDDKHNNAKYAVSMAR-RIGARVYAL-------PEDLVEV---KPKMVMTVFACLMGRGMK 116 (124)
T ss_dssp CCTTTSCCSSCCHHHHHHHHHHHHHHHH-HTCCSCCCC-------HHHHHHT---CTTTTTHHHHHHHHHSCC
T ss_pred cCHHHhcCCCCCHHHHHHHHHHHHHHHH-HcCCCcccC-------HHHHhcC---cchhhHHHHHHHHHHHhh
Confidence 5787 6777889999999999996 799999999 9999864 559999999999987643
No 22
>2yrn_A Neuron navigator 2 isoform 4; calponin homolgy domain, helicase, all alpha, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=83.30 E-value=2 Score=26.73 Aligned_cols=51 Identities=18% Similarity=0.165 Sum_probs=40.2
Q ss_pred ccCHHhhHHHHHHHHHHhcCCch-hhhhhhccCCcccccccCCCCchhHHHHHHHHHHhhhcC
Q psy6951 11 QRNIYSNNELAFRTAERHLGIPA-LLDARESVLDAEDMVEYAVPDRLSILTYLSQFYQVFVNQ 72 (72)
Q Consensus 11 ~~~~~~N~~lAf~~Ae~~lGIp~-lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~f~~~ 72 (72)
+-...+|+..|++.++ ..|++. =+. ++|+++ -+.+.|+.-+-+++.+|..|
T Consensus 75 ~~~~~eNv~~aL~~~~-~~gv~~~~i~-------~~DI~d---gn~~~iL~Llw~L~r~~q~~ 126 (129)
T 2yrn_A 75 RSQMIENIDACLNFLA-AKGINIQGLS-------AEEIRN---GNLKAILGLFFSLSRYKQQQ 126 (129)
T ss_dssp TTHHHHHHHHHHHHHH-HHTCCCTTCC-------HHHHHH---TCHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHHHH-HhCCcccCCC-------hhhhhc---CCHhHHHHHHHHHHHHHhhh
Confidence 3446899999999996 579874 245 999975 67889999999988888764
No 23
>2vzc_A Alpha-parvin; membrane, cytoplasm, cytoskeleton, cell junction, alternative splicing, calponin homology domain, actin-binding, cell membrane; 1.05A {Homo sapiens} PDB: 2vzd_A* 2vzg_B* 2vzi_B* 2k2r_A 3kmu_B 3kmw_B* 3rep_B*
Probab=82.09 E-value=2.1 Score=27.07 Aligned_cols=48 Identities=23% Similarity=0.255 Sum_probs=37.8
Q ss_pred cCHHhhHHHHHHHHHHhcCCch-hhhhhhccCCcccccccCCCCchhHHHHHHHHHHhhh
Q psy6951 12 RNIYSNNELAFRTAERHLGIPA-LLDARESVLDAEDMVEYAVPDRLSILTYLSQFYQVFV 70 (72)
Q Consensus 12 ~~~~~N~~lAf~~Ae~~lGIp~-lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~f~ 70 (72)
....+|+..|++.+++ .||.- =+. |+|+++ -+++.++..+-+++..|.
T Consensus 80 ~~kieNv~~aL~~lk~-~gi~l~~I~-------~~DIvd---Gn~kliLgLiW~li~~~~ 128 (131)
T 2vzc_A 80 EQKVLNVSFAFELMQD-GGLEKPKPR-------PEDIVN---CDLKSTLRVLYNLFTKYR 128 (131)
T ss_dssp HHHHHHHHHHHHHHHH-TTCCCCSSC-------HHHHHT---TCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHH-cCCCcCCCC-------HHHhhC---CCHHhHHHHHHHHHHHHh
Confidence 3568999999999975 78863 345 999975 578899998888877764
No 24
>1wyo_A Protein EB3, microtubule-associated protein RP/EB family member 3; CH domain, microtubule-binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.82 E-value=11 Score=25.01 Aligned_cols=54 Identities=15% Similarity=0.294 Sum_probs=34.7
Q ss_pred CCCccCCCccCHHhhHHHHHHHHHHhcCCchhhhhhhccCCcccccccCCCCchhHHHHHHH
Q psy6951 3 KDDFASLDQRNIYSNNELAFRTAERHLGIPALLDARESVLDAEDMVEYAVPDRLSILTYLSQ 64 (72)
Q Consensus 3 ~id~~sl~~~~~~~N~~lAf~~Ae~~lGIp~lLd~~~~~~~~ed~~~~~~pD~~si~tYls~ 64 (72)
+|.|.+=..-+-.+|.+.--+ |-+.+||++.++ .+.++...--|.+-.+.++-.
T Consensus 67 KVkf~a~~e~e~~~N~k~lQ~-af~k~gV~k~ip-------V~kLvkgk~qdNlEFlqWfk~ 120 (159)
T 1wyo_A 67 KVKFQAKLEHEYIHNFKVLQA-AFKKMGVDKIIP-------VEKLVKGKFQDNFEFIQWFKK 120 (159)
T ss_dssp SCCTTCCSSHHHHHHHHHHHH-HHHHHTCCCCCC-------HHHHTTTCSHHHHHHHHHHHH
T ss_pred hhccCCCChHHHHHHHHHHHH-HHHHcCCCCccC-------HHHHhcCCchhHHHHHHHHHH
Confidence 556666556666777776444 445799999999 999976544444444443333
No 25
>3hoc_A Filamin-A; calponin homology domain, actin binding domain, acetylation, actin-binding, alternative splicing, cytoplasm, cytoskeleton; 2.30A {Homo sapiens} PDB: 3hop_A 3hor_A
Probab=55.09 E-value=17 Score=25.60 Aligned_cols=46 Identities=15% Similarity=0.210 Sum_probs=35.5
Q ss_pred HHhhHHHHHHHHHHhcCCchh-hhhhhccCCcccccccCCCCchhHHHHHHHHHHhhh
Q psy6951 14 IYSNNELAFRTAERHLGIPAL-LDARESVLDAEDMVEYAVPDRLSILTYLSQFYQVFV 70 (72)
Q Consensus 14 ~~~N~~lAf~~Ae~~lGIp~l-Ld~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~f~ 70 (72)
..+|+..|++.++ ..|+.-. +. ++|+++ -+++.++.-+-++..+|.
T Consensus 106 kleNv~~aL~~lk-~~gv~lvnI~-------~~DIvd---Gn~kliLgLlW~Li~~~~ 152 (272)
T 3hoc_A 106 QLENVSVALEFLD-RESIKLVSID-------SKAIVD---GNLKLILGLIWTLILHYS 152 (272)
T ss_dssp HHHHHHHHHHHHH-HTTCCCSSCC-------HHHHHT---TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HcCCcccccc-------cchhhc---CCHHHHHHHHHHHHHHHh
Confidence 6899999999997 6798643 45 999974 567888888877766653
No 26
>2wa7_A Filamin-B; disease mutation, skeletal dysplasia, structural protein, actin-crosslinking, myogenesis, cytoskeleton; 1.85A {Homo sapiens} PDB: 2wa5_A 2wa6_A 3fer_A
Probab=54.76 E-value=17 Score=24.68 Aligned_cols=46 Identities=15% Similarity=0.202 Sum_probs=35.2
Q ss_pred HHhhHHHHHHHHHHhcCCchh-hhhhhccCCcccccccCCCCchhHHHHHHHHHHhhh
Q psy6951 14 IYSNNELAFRTAERHLGIPAL-LDARESVLDAEDMVEYAVPDRLSILTYLSQFYQVFV 70 (72)
Q Consensus 14 ~~~N~~lAf~~Ae~~lGIp~l-Ld~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~f~ 70 (72)
..+|+..|++.++ ..|++-. +. ++|+++ -+++.|+.-+-++..+|.
T Consensus 79 ~~eNv~~aL~~~k-~~g~~lv~I~-------~~DIvd---G~~kliLgLlW~li~~~~ 125 (245)
T 2wa7_A 79 QLENVSVALEFLD-RESIKLVSID-------SKAIVD---GNLKLILGLVWTLILHYS 125 (245)
T ss_dssp HHHHHHHHHHHHH-HTTCCCCSCC-------HHHHHT---TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HcCCcccCCC-------HHHhhC---CCHHHHHHHHHHHHHHHc
Confidence 5899999999987 4788643 34 999974 567888888877776653
No 27
>2qjz_A Microtubule-associated protein RP/EB family member 1; calponin homology domain, microtubule plus END, +TIP, protein binding; 1.25A {Homo sapiens} SCOP: a.40.1.1 PDB: 1pa7_A 1ueg_A 3co1_A 1v5k_A
Probab=49.34 E-value=9 Score=24.33 Aligned_cols=56 Identities=13% Similarity=0.341 Sum_probs=34.1
Q ss_pred CCCccCCCccCHHhhHHHHHHHHHHhcCCchhhhhhhccCCcccccccCCCCchhHHHHHHHHH
Q psy6951 3 KDDFASLDQRNIYSNNELAFRTAERHLGIPALLDARESVLDAEDMVEYAVPDRLSILTYLSQFY 66 (72)
Q Consensus 3 ~id~~sl~~~~~~~N~~lAf~~Ae~~lGIp~lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~~ 66 (72)
++.|.+=..-.-.+|.+.--+ |-+.+||++.++ .+.++...--|.+-.+.++-.||
T Consensus 50 KVkf~a~~e~e~~~N~k~lq~-af~k~gV~k~i~-------v~kLvkgk~qdnleflqW~k~f~ 105 (123)
T 2qjz_A 50 KVKFQAKLEHEYIQNFKILQA-GFKRMGVDKIIP-------VDKLVKGKFQDNFEFVQWFKKFF 105 (123)
T ss_dssp GCCTTCCSHHHHHHHHHHHHH-HHHHHTCCCCCC-------HHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HhccCCCChHHHHHHHHHHHH-HHHHcCCCCccC-------HHHHHcCCchhHHHHHHHHHHHH
Confidence 455555555555677765444 445799999999 99997544334444444433333
No 28
>1wku_A Alpha-actinin 3; calponin homology domain, actin binding domain, contractIle protein; 1.60A {Homo sapiens} PDB: 1tjt_A 2r0o_A 2eyi_A 2eyn_A 3lue_K
Probab=44.89 E-value=25 Score=24.11 Aligned_cols=46 Identities=17% Similarity=0.210 Sum_probs=34.4
Q ss_pred CHHhhHHHHHHHHHHhcCCchh-hhhhhccCCcccccccCCCCchhHHHHHHHHHHhh
Q psy6951 13 NIYSNNELAFRTAERHLGIPAL-LDARESVLDAEDMVEYAVPDRLSILTYLSQFYQVF 69 (72)
Q Consensus 13 ~~~~N~~lAf~~Ae~~lGIp~l-Ld~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~f 69 (72)
...+|+..|++.++ ..|++.. +. ++|+++ -+++.++.-+-++...|
T Consensus 83 ~~~eNi~~aL~~~k-~~gv~lv~I~-------~~DIvd---G~~kliLgLlW~li~~~ 129 (254)
T 1wku_A 83 HKIANVNKALDFIA-SKGVKLVSIG-------AEEIVD---GNLKMTLGMIWTIILRF 129 (254)
T ss_dssp HHHHHHHHHHHHHH-TTTCCCCSCC-------HHHHHH---CCHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHH-HcCCCccCCC-------HHHHhc---cchHHHHHHHHHHHHHH
Confidence 46789999999987 5788743 34 999975 46788888777766555
No 29
>1aoa_A T-fimbrin; actin-binding protein, calcium-binding, phosphorylation; 2.40A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1
Probab=37.20 E-value=48 Score=22.68 Aligned_cols=45 Identities=27% Similarity=0.336 Sum_probs=32.3
Q ss_pred CHHhhHHHHHHHHHHhcCCchh-hhhhhccCCcccccccCCCCchhHHHHHHHHHHh
Q psy6951 13 NIYSNNELAFRTAERHLGIPAL-LDARESVLDAEDMVEYAVPDRLSILTYLSQFYQV 68 (72)
Q Consensus 13 ~~~~N~~lAf~~Ae~~lGIp~l-Ld~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~ 68 (72)
...+|+..|++.++ ..|++-. +. ++|+++ -+++.++.-+-++...
T Consensus 92 ~~~eNv~~aL~~~k-~~g~~l~~I~-------~~DIvd---g~~~liLgLlw~li~~ 137 (275)
T 1aoa_A 92 IIQENLNLALNSAS-AIGCHVVNIG-------AEDLRA---GKPHLVLGLLWQIIKI 137 (275)
T ss_dssp HHHHHHHHHHHHHH-HTTCCCTTCC-------HHHHHT---TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HcCCcccCCC-------HHHHHc---CcHHHHHHHHHHHHHH
Confidence 36899999999887 5788643 35 999975 4556777666665543
No 30
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=36.62 E-value=46 Score=23.91 Aligned_cols=47 Identities=15% Similarity=0.191 Sum_probs=35.4
Q ss_pred HHhhHHHHHHHHHHhcCCchhhhhhhccCCcccccccCCCCchhHHHHHHHHHHhhh
Q psy6951 14 IYSNNELAFRTAERHLGIPALLDARESVLDAEDMVEYAVPDRLSILTYLSQFYQVFV 70 (72)
Q Consensus 14 ~~~N~~lAf~~Ae~~lGIp~lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~f~ 70 (72)
..+|+..|++.++ ..|+.-. .++++|+++ -+++.|+.-+-++..+|.
T Consensus 76 k~eNv~~al~~~~-~~g~~lv------~i~~~DIvd---Gn~~liLgLiW~li~~~~ 122 (347)
T 4b7l_A 76 QLENVSVALEFLD-RESIKLV------SIDSKAIVD---GNLKLILGLVWTLILHYS 122 (347)
T ss_dssp HHHHHHHHHHHHH-HTTCCCS------SCCHHHHHT---TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HhccccC------CCCcchhhc---CCHhhHHHHHHHHHHHHh
Confidence 5799999999997 4688632 234999975 567888888888777664
No 31
>3f7p_A Plectin-1; plakin, hemidesmosome, cell adhesion, epidermolysis bullosa, actin-binding, alternative splicing, coiled coil, cytoplasm; 2.75A {Homo sapiens}
Probab=36.26 E-value=50 Score=23.48 Aligned_cols=46 Identities=13% Similarity=0.209 Sum_probs=34.6
Q ss_pred CHHhhHHHHHHHHHHhcCCchh-hhhhhccCCcccccccCCCCchhHHHHHHHHHHhh
Q psy6951 13 NIYSNNELAFRTAERHLGIPAL-LDARESVLDAEDMVEYAVPDRLSILTYLSQFYQVF 69 (72)
Q Consensus 13 ~~~~N~~lAf~~Ae~~lGIp~l-Ld~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~f 69 (72)
...+|+..|++.++ ..|+.-. +. ++|+++ -+++.++.-+-++...|
T Consensus 128 ~kleNvn~aL~~lk-~~gv~lv~I~-------~~DIvd---Gn~kliLgLlW~Li~~~ 174 (296)
T 3f7p_A 128 HKLQNVQIALDYLR-HRQVKLVNIR-------NDDIAD---GNPKLTLGLIWTIILHF 174 (296)
T ss_dssp HHHHHHHHHHHHHH-HTTCCCTTCC-------HHHHHT---TCHHHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHH-HhCccccCCC-------hhhhhc---cchHHHHHHHHHhhccc
Confidence 45799999999996 5788632 34 999975 46788888877776655
No 32
>3nrt_A Putative ryanodine receptor; PSI-2, protein structure initiative, structural genomics, MI center for structural genomics (MCSG); 2.54A {Bacteroides thetaiotaomicron}
Probab=30.65 E-value=25 Score=21.56 Aligned_cols=25 Identities=16% Similarity=0.264 Sum_probs=20.4
Q ss_pred CCCCccCCCccCHHhhHHHHHHHHH
Q psy6951 2 CKDDFASLDQRNIYSNNELAFRTAE 26 (72)
Q Consensus 2 ~~id~~sl~~~~~~~N~~lAf~~Ae 26 (72)
|+++|+.|+......|...+.++-.
T Consensus 66 ~Lvpy~~L~e~~K~~dr~~~~e~lk 90 (103)
T 3nrt_A 66 CLVPYDELPEEEKEYDRNTAMNTIK 90 (103)
T ss_dssp TCSCGGGSCHHHHHHHHHHHHHHHH
T ss_pred cccchhhCCHHHHHHhHHHHHHHHH
Confidence 8999999998888888777776654
No 33
>4dh4_A MIF; trimer, isomerase; 1.82A {Toxoplasma gondii}
Probab=27.70 E-value=41 Score=19.79 Aligned_cols=21 Identities=29% Similarity=0.393 Sum_probs=14.6
Q ss_pred CHHhhHHHHHHHHHHhcCCch
Q psy6951 13 NIYSNNELAFRTAERHLGIPA 33 (72)
Q Consensus 13 ~~~~N~~lAf~~Ae~~lGIp~ 33 (72)
...+..+.-++.-+++||||+
T Consensus 72 ~~~~l~~~i~~~l~~~Lgi~~ 92 (114)
T 4dh4_A 72 TNCKIAAALSAACERHLGVPK 92 (114)
T ss_dssp HHHHHHHHHHHHHHHHHCCCG
T ss_pred HHHHHHHHHHHHHHHHhCcCc
Confidence 334444555888889999985
No 34
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} SCOP: d.80.1.3 PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 3smb_A* 3smc_A* 3u18_A* 4f2k_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* ...
Probab=27.60 E-value=40 Score=19.94 Aligned_cols=19 Identities=21% Similarity=0.148 Sum_probs=13.2
Q ss_pred HhhHHHHHHHHHHhcCCch
Q psy6951 15 YSNNELAFRTAERHLGIPA 33 (72)
Q Consensus 15 ~~N~~lAf~~Ae~~lGIp~ 33 (72)
.+..+.-++.-+++||||+
T Consensus 73 ~~~s~~i~~~l~~~Lgi~~ 91 (114)
T 3djh_A 73 RSYSKLLCGLLAERLRISP 91 (114)
T ss_dssp HHHHHHHHHHHHHHHCCCG
T ss_pred HHHHHHHHHHHHHHhCcCc
Confidence 3344455778888999985
No 35
>1h67_A Calponin alpha; cytoskeleton, calponin homology domain, actin binding,; NMR {Gallus gallus} SCOP: a.40.1.1
Probab=26.95 E-value=72 Score=18.99 Aligned_cols=43 Identities=19% Similarity=0.342 Sum_probs=30.6
Q ss_pred CHHhhHHHHHHHHHHhcCCch--hhhhhhccCCcccccccCCCCchhHHHHHHHH
Q psy6951 13 NIYSNNELAFRTAERHLGIPA--LLDARESVLDAEDMVEYAVPDRLSILTYLSQF 65 (72)
Q Consensus 13 ~~~~N~~lAf~~Ae~~lGIp~--lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~ 65 (72)
...+|...-++.++ .+|+|. +.+ +.|+.+ .-+...|+.-+..+
T Consensus 57 ~~~eNI~~Fl~a~~-~~Gv~~~~lF~-------~~DL~e--~kn~~~V~~~l~aL 101 (108)
T 1h67_A 57 HKLENIGNFLRAIK-HYGVKPHDIFE-------ANDLFE--NTNHTQVQSTLIAL 101 (108)
T ss_dssp HHHHHHHHHHHHHH-HHTSCGGGSCC-------HHHHHH--TCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HcCCCcccccC-------hhHHHh--CCChHHHHHHHHHH
Confidence 45789999899875 799996 467 899965 34555565555544
No 36
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=24.68 E-value=65 Score=24.98 Aligned_cols=47 Identities=19% Similarity=0.201 Sum_probs=34.5
Q ss_pred cCHHhhHHHHHHHHHHhcCCchh-hhhhhccCCcccccccCCCCchhHHHHHHHHHHhh
Q psy6951 12 RNIYSNNELAFRTAERHLGIPAL-LDARESVLDAEDMVEYAVPDRLSILTYLSQFYQVF 69 (72)
Q Consensus 12 ~~~~~N~~lAf~~Ae~~lGIp~l-Ld~~~~~~~~ed~~~~~~pD~~si~tYls~~~~~f 69 (72)
-...+|+..|++.++ ..|++-. +. ++|+++ .+++.|+.-+-++...|
T Consensus 63 ~~~~eN~~~~l~~~~-~~g~~~~~i~-------~~di~~---g~~~~~l~l~w~l~~~~ 110 (863)
T 1sjj_A 63 VHKISNVNKALDFIA-SKGVKLVSIG-------AEEIVD---GNVKMTLGMIWTIILRF 110 (863)
T ss_dssp HHHHHHHHHHHHHHH-HTTCCCTTCC-------SHHHHT---TCHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHH-HcCCccCCCC-------hHHhhc---CCHHHHHHHHHHHHHHH
Confidence 346789999999997 5798743 45 999975 46778887776665544
No 37
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=24.32 E-value=71 Score=18.50 Aligned_cols=24 Identities=13% Similarity=0.093 Sum_probs=15.9
Q ss_pred CccCHHhhHHHHHHHHHHhcCCch
Q psy6951 10 DQRNIYSNNELAFRTAERHLGIPA 33 (72)
Q Consensus 10 ~~~~~~~N~~lAf~~Ae~~lGIp~ 33 (72)
+++.+.+-.+.-++..+++||||+
T Consensus 69 ~~eqk~~l~~~i~~~l~~~lgi~~ 92 (112)
T 3b64_A 69 GPSEPEKVTSIVTAAITKECGIVA 92 (112)
T ss_dssp CTTHHHHHHHHHHHHHHHHHCCCG
T ss_pred CHHHHHHHHHHHHHHHHHHhCcCc
Confidence 334444455556777888999985
No 38
>1wyn_A Calponin-2; CH domain, F-actin binding, all alpha helix, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=23.14 E-value=1.5e+02 Score=18.70 Aligned_cols=43 Identities=16% Similarity=0.223 Sum_probs=30.5
Q ss_pred CHHhhHHHHHHHHHHhcCCch--hhhhhhccCCcccccccCCCCchhHHHHHHHH
Q psy6951 13 NIYSNNELAFRTAERHLGIPA--LLDARESVLDAEDMVEYAVPDRLSILTYLSQF 65 (72)
Q Consensus 13 ~~~~N~~lAf~~Ae~~lGIp~--lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~ 65 (72)
...+|+..-++.++ .+|+|. +.+ +.|+.+ .-+...|+..|..+
T Consensus 71 ~~~eNI~~FL~a~~-~~Gv~~~~lF~-------~~DL~e--~kn~~~V~~cL~aL 115 (146)
T 1wyn_A 71 HQLENLSNFIKAMV-SYGMNPVDLFE-------ANDLFE--SGNMTQVQVSLLAL 115 (146)
T ss_dssp HHHHHHHHHHHHHH-HHTCCSSSCCC-------HHHHHT--CSCSHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH-HcCCCcccccC-------hhHHHh--cCChHHHHHHHHHH
Confidence 35789999888775 799996 567 899975 34545565555554
No 39
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=23.06 E-value=79 Score=18.33 Aligned_cols=25 Identities=40% Similarity=0.535 Sum_probs=17.0
Q ss_pred CCccCHHhhHHHHHHHHHHhcCCch
Q psy6951 9 LDQRNIYSNNELAFRTAERHLGIPA 33 (72)
Q Consensus 9 l~~~~~~~N~~lAf~~Ae~~lGIp~ 33 (72)
.+++.+.+-.+..++..+++||||+
T Consensus 68 ~t~eqk~~l~~~i~~~l~~~lgi~~ 92 (115)
T 2xcz_A 68 LDGSRTQEVSELVCGHIEQNLGIPA 92 (115)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHCCCG
T ss_pred CCHHHHHHHHHHHHHHHHHHhCcCc
Confidence 3444455555666788888999985
No 40
>3fwt_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.90A {Leishmania major}
Probab=21.96 E-value=68 Score=19.73 Aligned_cols=25 Identities=16% Similarity=0.106 Sum_probs=16.5
Q ss_pred CCccCHHhhHHHHHHHHHHhcCCch
Q psy6951 9 LDQRNIYSNNELAFRTAERHLGIPA 33 (72)
Q Consensus 9 l~~~~~~~N~~lAf~~Ae~~lGIp~ 33 (72)
+++....+..+.-++.-+++||||+
T Consensus 89 ~~~e~n~~~s~~i~~~l~~~LgI~~ 113 (133)
T 3fwt_A 89 YAPSKPKMMTPRIAAAITKECGIPA 113 (133)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHCCCG
T ss_pred CCHHHHHHHHHHHHHHHHHHhCcCh
Confidence 3444445555566777888999985
No 41
>1wyp_A Calponin 1; CH domain, F-actin binding, all-alpha, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=21.27 E-value=1.6e+02 Score=18.29 Aligned_cols=43 Identities=14% Similarity=0.267 Sum_probs=30.2
Q ss_pred CHHhhHHHHHHHHHHhcCCch--hhhhhhccCCcccccccCCCCchhHHHHHHHH
Q psy6951 13 NIYSNNELAFRTAERHLGIPA--LLDARESVLDAEDMVEYAVPDRLSILTYLSQF 65 (72)
Q Consensus 13 ~~~~N~~lAf~~Ae~~lGIp~--lLd~~~~~~~~ed~~~~~~pD~~si~tYls~~ 65 (72)
...+|...-++.++ ++|+|. +.+ +.|+.+ .-+...|+.-|..+
T Consensus 71 ~~~eNI~~Fl~a~~-~~Gv~~~~lF~-------~~DL~e--~kn~~~V~~cL~aL 115 (136)
T 1wyp_A 71 HQLENIGNFIKAIT-KYGVKPHDIFE-------ANDLFE--NTNHTQVQSTLLAL 115 (136)
T ss_dssp HHHHHHHHHHHHHH-HHTCCGGGCCC-------HHHHHS--CSCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HcCCCcccccC-------chHHhc--CCCHHHHHHHHHHH
Confidence 46789999898775 899996 467 899975 34445555555544
No 42
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=20.30 E-value=77 Score=18.29 Aligned_cols=20 Identities=25% Similarity=0.384 Sum_probs=13.3
Q ss_pred HHhhHHHHHHHHHHhcCCch
Q psy6951 14 IYSNNELAFRTAERHLGIPA 33 (72)
Q Consensus 14 ~~~N~~lAf~~Ae~~lGIp~ 33 (72)
+.+-.+.-++..+++||||+
T Consensus 72 k~~l~~~i~~~l~~~lgi~~ 91 (113)
T 1hfo_A 72 NRDHSAKLFDHLNTKLGIPK 91 (113)
T ss_dssp HHHHHHHHHHHHHHHHCCCG
T ss_pred HHHHHHHHHHHHHHHhCcCc
Confidence 33444455777788999985
No 43
>3t5s_A Gilaa.00834.A, macrophage migration inhibitory factor; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Giardia lamblia}
Probab=20.07 E-value=81 Score=19.47 Aligned_cols=25 Identities=12% Similarity=0.066 Sum_probs=15.1
Q ss_pred CCccCHHhhHHHHHHHHHHhcCCch
Q psy6951 9 LDQRNIYSNNELAFRTAERHLGIPA 33 (72)
Q Consensus 9 l~~~~~~~N~~lAf~~Ae~~lGIp~ 33 (72)
+++....+..+.-++.-+++||||+
T Consensus 89 ~t~e~n~~~s~~i~~~l~~~Lgi~~ 113 (135)
T 3t5s_A 89 ISQAKNPSISAAITGCLTQHFKVKP 113 (135)
T ss_dssp ----CCHHHHHHHHHHHHHHHCCCG
T ss_pred EeccCCchHHHHHHHHHHHhcccCc
Confidence 3344445555566788888999985
Done!