BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6962
(88 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O57406|CEL1A_XENLA CUGBP Elav-like family member 1-A OS=Xenopus laevis GN=cugbp1-a
PE=1 SV=1
Length = 489
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Query: 17 SMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKG 71
+M P+ PDPD IKMFVGQ+PRS E +L ++F +YG VY INVLRD+ QSKG
Sbjct: 4 TMDHPDHPDPDSIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKG 60
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGLKNTSNITQDFSTTTI 87
K+F+G + ++ +E D+ MFS +G++ +LR G S+G + T+ + I
Sbjct: 109 KLFIGMVSKNCNENDIRAMFSPFGQIEECRILRGP-DGMSRGCAFVTFTTRSMAQMAI 165
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 22 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
++ P+ +F+ +P+ + DL +MF +G V + V DK T SK
Sbjct: 397 QKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSSKVFIDKQTNLSK 445
>sp|Q28HE9|CELF1_XENTR CUGBP Elav-like family member 1 OS=Xenopus tropicalis GN=celf1
PE=2 SV=1
Length = 490
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/57 (57%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Query: 17 SMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKG 71
+M P+ PDPD IKMFVGQ+PRS E +L ++F +YG VY INVLRD+ QSKG
Sbjct: 4 TMDHPDHPDPDSIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKG 60
Score = 33.9 bits (76), Expect = 0.27, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGLKNTSNITQDFSTTTI 87
K+FVG + + +E D+ MFS++G++ +LR G S+G + T+ + I
Sbjct: 109 KLFVGMVSKKCNENDIRAMFSQFGQIEESRILRGP-DGMSRGCAFVTFTTRSMAQMAI 165
Score = 32.7 bits (73), Expect = 0.67, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 22 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
++ P+ +F+ +P+ + DL +MF +G V + V DK T SK
Sbjct: 398 QKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSK 446
>sp|Q92879|CELF1_HUMAN CUGBP Elav-like family member 1 OS=Homo sapiens GN=CELF1 PE=1
SV=2
Length = 486
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 21 PEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKG 71
P+QPD D IKMFVGQ+PR+ E DL ++F +YG VY INVLRD+ QSKG
Sbjct: 8 PDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKG 60
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGLKNTSNITQDFSTTTI 87
K+F+G I + E D+ MFS +G++ +LR G S+G + T+ + T I
Sbjct: 109 KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGP-DGLSRGCAFVTFTTRAMAQTAI 165
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 22 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
++ P+ +F+ +P+ + DL +MF +G V + V DK T SK
Sbjct: 394 QKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSK 442
>sp|Q5R995|CELF1_PONAB CUGBP Elav-like family member 1 OS=Pongo abelii GN=CELF1 PE=2
SV=1
Length = 513
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 21 PEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKG 71
P+QPD D IKMFVGQ+PR+ E DL ++F +YG VY INVLRD+ QSKG
Sbjct: 35 PDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKG 87
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 22 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
++ P+ +F+ +P+ + DL +MF +G V + V DK T SK
Sbjct: 421 QKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSK 469
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGLKNTSNITQDFSTTTI 87
K+F+G I + E D+ MFS +G++ +L G S+G + T+ + T I
Sbjct: 136 KLFIGMISKKCTENDIRVMFSSFGQIEECRILWGP-DGLSRGCALVTFTTRAMAQTAI 192
>sp|A4IIM2|CELF2_XENTR CUGBP Elav-like family member 2 OS=Xenopus tropicalis GN=celf2
PE=2 SV=1
Length = 513
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 22 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKG 71
+QPDPD IKMFVGQIPRS E +L +F YG VY INVLRD+ QSKG
Sbjct: 28 DQPDPDAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKG 79
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 11 SLVCFRSMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
SL+ +S + ++ P+ +F+ +P+ + D+ +MF +G V + V DK T SK
Sbjct: 410 SLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSK 469
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLR 62
K+F+G + + +E D+ MFS +G++ +LR
Sbjct: 128 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILR 160
>sp|Q7ZXE2|CELF2_XENLA CUGBP Elav-like family member 2 OS=Xenopus laevis GN=celf2 PE=1
SV=1
Length = 536
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 22 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKG 71
+QPDPD IKMFVGQIPRS E +L +F YG VY INVLRD+ QSKG
Sbjct: 51 DQPDPDAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKG 102
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 11 SLVCFRSMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
SL+ +S + ++ P+ +F+ +P+ + D+ +MF +G V + V DK T SK
Sbjct: 433 SLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSK 492
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLR 62
K+F+G + + +E D+ MFS +G++ +LR
Sbjct: 151 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILR 183
>sp|P28659|CELF1_MOUSE CUGBP Elav-like family member 1 OS=Mus musculus GN=Celf1 PE=1
SV=2
Length = 486
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 21 PEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKG 71
P+QPD D IKMFVGQ+PR+ E DL ++F +YG VY IN+LRD+ QSKG
Sbjct: 8 PDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKG 60
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGLKNTSNITQDFSTTTI 87
K+F+G I + E D+ MFS +G++ +LR G S+G + T+ + T I
Sbjct: 109 KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGP-DGLSRGCAFVTFTTRTMAQTAI 165
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 22 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
++ P+ +F+ +P+ + DL +MF +G V + V DK T SK
Sbjct: 394 QKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSK 442
>sp|Q4QQT3|CELF1_RAT CUGBP Elav-like family member 1 OS=Rattus norvegicus GN=Celf1
PE=2 SV=1
Length = 487
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 21 PEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKG 71
P+QPD D IKMFVGQ+PR+ E DL ++F +YG VY IN+LRD+ QSKG
Sbjct: 8 PDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKG 60
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGLKNTSNITQDFSTTTI 87
K+F+G I + E D+ MFS +G++ +LR G S+G + T+ + T I
Sbjct: 109 KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGP-DGLSRGCAFVTFTTRTMAQTAI 165
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 22 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
++ P+ +F+ +P+ + DL +MF +G V + V DK T SK
Sbjct: 395 QKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSK 443
>sp|Q5F3T7|CELF1_CHICK CUGBP Elav-like family member 1 OS=Gallus gallus GN=CELF1 PE=1
SV=2
Length = 489
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/57 (57%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Query: 17 SMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKG 71
++ P+QPD D IKMFVGQ+PRS E DL ++F +YG VY INVLRD+ QSKG
Sbjct: 4 TLDHPDQPDLDAIKMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKG 60
Score = 33.5 bits (75), Expect = 0.36, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGLKNTSNITQDFSTTTI 87
K+F+G I + +E D+ MFS +G++ +LR G S+G + T+ + T I
Sbjct: 109 KLFIGMISKKCNENDIRVMFSPFGQIEECRILRGP-DGLSRGCAFVTFTTRAMAQTAI 165
Score = 32.7 bits (73), Expect = 0.61, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 22 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
++ P+ +F+ +P+ + DL +MF +G V + V DK T SK
Sbjct: 397 QKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSK 445
>sp|Q792H5|CELF2_RAT CUGBP Elav-like family member 2 OS=Rattus norvegicus GN=Celf2
PE=2 SV=1
Length = 508
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/52 (63%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
Query: 22 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKG 71
+QPDPD IKMFVGQIPRS E +L ++F YG VY INVLRD+ QSKG
Sbjct: 33 DQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKG 84
Score = 32.7 bits (73), Expect = 0.61, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 11 SLVCFRSMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
SL+ +S + ++ P+ +F+ +P+ + D+ +MF +G V + V DK T SK
Sbjct: 405 SLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSK 464
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
K+F+G + + +E D+ MFS +G++ +LR G S+G
Sbjct: 133 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGP-DGLSRG 173
>sp|Q5R8Y8|CELF2_PONAB CUGBP Elav-like family member 2 OS=Pongo abelii GN=CELF2 PE=2
SV=2
Length = 508
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/52 (63%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
Query: 22 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKG 71
+QPDPD IKMFVGQIPRS E +L ++F YG VY INVLRD+ QSKG
Sbjct: 33 DQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKG 84
Score = 32.7 bits (73), Expect = 0.61, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 11 SLVCFRSMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
SL+ +S + ++ P+ +F+ +P+ + D+ +MF +G V + V DK T SK
Sbjct: 405 SLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSK 464
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
K+F+G + + +E D+ MFS +G++ +LR G S+G
Sbjct: 133 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGP-DGLSRG 173
>sp|Q9Z0H4|CELF2_MOUSE CUGBP Elav-like family member 2 OS=Mus musculus GN=Celf2 PE=1
SV=1
Length = 508
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/52 (63%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
Query: 22 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKG 71
+QPDPD IKMFVGQIPRS E +L ++F YG VY INVLRD+ QSKG
Sbjct: 33 DQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKG 84
Score = 32.7 bits (73), Expect = 0.61, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 11 SLVCFRSMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
SL+ +S + ++ P+ +F+ +P+ + D+ +MF +G V + V DK T SK
Sbjct: 405 SLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSK 464
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
K+F+G + + +E D+ MFS +G++ +LR G S+G
Sbjct: 133 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGP-DGLSRG 173
>sp|O95319|CELF2_HUMAN CUGBP Elav-like family member 2 OS=Homo sapiens GN=CELF2 PE=1
SV=1
Length = 508
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/52 (63%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
Query: 22 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKG 71
+QPDPD IKMFVGQIPRS E +L ++F YG VY INVLRD+ QSKG
Sbjct: 33 DQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKG 84
Score = 32.7 bits (73), Expect = 0.61, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 11 SLVCFRSMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
SL+ +S + ++ P+ +F+ +P+ + D+ +MF +G V + V DK T SK
Sbjct: 405 SLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSK 464
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
K+F+G + + +E D+ MFS +G++ +LR G S+G
Sbjct: 133 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGP-DGLSRG 173
>sp|Q6PF35|CEL1B_XENLA CUGBP Elav-like family member 1-B OS=Xenopus laevis GN=cugbp1-b
PE=2 SV=1
Length = 489
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/57 (56%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 17 SMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKG 71
+M P+ PD D IKMFVGQ+PRS E +L ++F +YG VY INVLRD+ QSKG
Sbjct: 4 TMDHPDHPDSDSIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKG 60
Score = 32.3 bits (72), Expect = 0.85, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 22 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
++ P+ +F+ +P+ + DL +MF +G + + V DK T SK
Sbjct: 397 QKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNIVSAKVFIDKQTNLSK 445
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGLKNTSNITQDFSTTTI 87
K+F+G + + +E D+ +FS++G++ +LR G S+G + T+ + I
Sbjct: 109 KLFIGMVSKKCNENDIRTLFSQFGQIEESRILRGP-DGMSRGCAFITFTTRSMAQMAI 165
>sp|Q6P0B1|CELF2_DANRE CUGBP Elav-like family member 2 OS=Danio rerio GN=celf2 PE=2 SV=1
Length = 514
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/52 (61%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
Query: 22 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKG 71
+QPDPD IKMFVGQIPRS E +L ++F YG VY IN+LRD+ QSKG
Sbjct: 37 DQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKG 88
Score = 33.1 bits (74), Expect = 0.52, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 11 SLVCFRSMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
SL+ +S + ++ P+ +F+ +P+ + D+ +MF +G V + V DK T SK
Sbjct: 411 SLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSK 470
Score = 32.3 bits (72), Expect = 0.86, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
K+F+G + + +E D+ MFS YG++ +LR G S+G
Sbjct: 137 KLFIGMVSKKCNENDIRVMFSPYGQIEECRILRGP-DGLSRG 177
>sp|Q9IBD0|CELF1_DANRE CUGBP Elav-like family member 1 OS=Danio rerio GN=celf1 PE=1 SV=1
Length = 501
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 17 SMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKG 71
S+ P+QPD D IKMFVGQIPR+ E L ++F YG VY INVLRD+ QSKG
Sbjct: 4 SLDHPDQPDIDSIKMFVGQIPRTWSEDQLRELFEPYGAVYEINVLRDRSQNPPQSKG 60
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLR 62
K+FVG I + +E D+ MFS YG++ +LR
Sbjct: 109 KLFVGMISKKCNENDIRLMFSPYGQIEECRILR 141
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 22 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
++ P+ +F+ +P+ + DL +MF +G V + V DK T SK
Sbjct: 409 QKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVISAKVFIDKQTNLSK 457
>sp|Q7T2T1|CELF2_CHICK CUGBP Elav-like family member 2 OS=Gallus gallus GN=CELF2 PE=1
SV=2
Length = 484
Score = 65.5 bits (158), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/52 (61%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 22 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKG 71
+QPDPD IK FVGQIPRS E +L ++F YG VY INVLRD+ QSKG
Sbjct: 9 DQPDPDAIKTFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKG 60
Score = 33.1 bits (74), Expect = 0.51, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 11 SLVCFRSMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
SL+ +S + ++ P+ +F+ +P+ + D+ +MF +G V + V DK T SK
Sbjct: 381 SLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSK 440
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
K+F+G + + +E D+ MFS +G++ +LR G S+G
Sbjct: 109 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGP-DGLSRG 149
>sp|Q96J87|CELF6_HUMAN CUGBP Elav-like family member 6 OS=Homo sapiens GN=CELF6 PE=1
SV=1
Length = 481
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/47 (57%), Positives = 36/47 (76%)
Query: 25 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
D D IK+FVGQIPR +DE DL +F E+GR+Y + VL+D++TG KG
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKG 88
Score = 36.6 bits (83), Expect = 0.046, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
Query: 17 SMSLPEQPD---------PDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG 67
S + P+QP P+ +F+ +P+ +A+L + F +G V + V D+ T
Sbjct: 375 STAFPQQPSALPQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATN 434
Query: 68 QSK 70
QSK
Sbjct: 435 QSK 437
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
K+FVG + + E D+ ++F +G + VLR G SKG
Sbjct: 135 KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTSKG 175
>sp|Q7TN33|CELF6_MOUSE CUGBP Elav-like family member 6 OS=Mus musculus GN=Celf6 PE=2
SV=1
Length = 460
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/47 (57%), Positives = 36/47 (76%)
Query: 25 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
D D IK+FVGQIPR +DE DL +F E+GR+Y + VL+D++TG KG
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKG 88
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 19 SLPEQ--PDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
+LP+Q P+ +F+ +P+ +A+L + F +G V + V D+ T QSK
Sbjct: 363 ALPQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSK 416
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
K+FVG + + E D+ ++F +G + VLR G SKG
Sbjct: 135 KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTSKG 175
>sp|Q7ZWM3|CEL3B_XENLA CUGBP Elav-like family member 3-B OS=Xenopus laevis GN=tnrc4-b
PE=2 SV=1
Length = 462
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 25 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
+PD IK+F+GQIPR++DE DL +F ++G++Y + V++DK TG KG
Sbjct: 3 EPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKG 49
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 26/45 (57%)
Query: 26 PDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
P+ +F+ +P+ ++++ +MF +G V + V D+ T QSK
Sbjct: 374 PEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSK 418
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
K+FVG + + + D+ +MF +G + VLR G SKG
Sbjct: 96 KLFVGMLGKQQTDEDVRRMFETFGNIDECTVLRGP-DGTSKG 136
>sp|Q91579|CEL3A_XENLA CUGBP Elav-like family member 3-A OS=Xenopus laevis GN=tnrc4-a
PE=2 SV=2
Length = 462
Score = 63.2 bits (152), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 25 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
+PD IK+F+GQIPR++DE DL +F ++G++Y + V++DK TG KG
Sbjct: 3 EPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKG 49
Score = 33.1 bits (74), Expect = 0.58, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 26/45 (57%)
Query: 26 PDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
P+ +F+ +P+ ++++ +MF +G V + V D+ T QSK
Sbjct: 374 PEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSK 418
Score = 30.0 bits (66), Expect = 5.0, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
K+FVG + + + D+ +MF +G + VLR G SKG
Sbjct: 96 KLFVGMLGKQQTDEDVRRMFEPFGNIDECTVLRGP-DGTSKG 136
>sp|Q6DGV1|CELF4_DANRE CUGBP Elav-like family member 4 OS=Danio rerio GN=celf4 PE=2 SV=1
Length = 520
Score = 62.8 bits (151), Expect = 6e-10, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 25 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
D D IK+F+GQIPR++DE DL +F E+G++Y + VL+D+ TG KG
Sbjct: 43 DHDAIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKG 89
Score = 33.9 bits (76), Expect = 0.31, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 26 PDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
P+ +F+ +P+ + +L +MF +G V + V D+ T QSK
Sbjct: 432 PEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSK 476
Score = 29.3 bits (64), Expect = 6.9, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
K+FVG + + E D+ ++F +G + +LR G SKG
Sbjct: 136 KLFVGMLNKQQCEDDVRRLFESFGSIEECTILRGP-DGNSKG 176
>sp|Q0V9L3|CELF4_XENTR CUGBP Elav-like family member 4 OS=Xenopus tropicalis GN=celf4
PE=2 SV=1
Length = 424
Score = 62.4 bits (150), Expect = 7e-10, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 25 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
D D IK+F+GQIPR++DE DL +F E+G++Y + VL+D+ TG KG
Sbjct: 43 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKG 89
>sp|Q4R535|CELF4_MACFA CUGBP Elav-like family member 4 OS=Macaca fascicularis GN=CELF4
PE=2 SV=1
Length = 474
Score = 62.4 bits (150), Expect = 7e-10, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 25 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
D D IK+F+GQIPR++DE DL +F E+G++Y + VL+D+ TG KG
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKG 96
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
K+FVG + + E D+ ++F +G + +LR G SKG
Sbjct: 142 KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGP-DGNSKG 182
>sp|Q5NVC8|CELF4_PONAB CUGBP Elav-like family member 4 OS=Pongo abelii GN=CELF4 PE=2
SV=2
Length = 486
Score = 62.0 bits (149), Expect = 9e-10, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 25 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
D D IK+F+GQIPR++DE DL +F E+G++Y + VL+D+ TG KG
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKG 96
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 23 QPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
QP K+FVG + + E D+ ++F +G + +LR G SKG
Sbjct: 146 QPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGP-DGNSKG 193
>sp|Q9BZC1|CELF4_HUMAN CUGBP Elav-like family member 4 OS=Homo sapiens GN=CELF4 PE=1
SV=1
Length = 486
Score = 62.0 bits (149), Expect = 9e-10, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 25 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
D D IK+F+GQIPR++DE DL +F E+G++Y + VL+D+ TG KG
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKG 96
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 23 QPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
QP K+FVG + + E D+ ++F +G + +LR G SKG
Sbjct: 146 QPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGP-DGNSKG 193
>sp|Q7TSY6|CELF4_MOUSE CUGBP Elav-like family member 4 OS=Mus musculus GN=Celf4 PE=1
SV=2
Length = 486
Score = 62.0 bits (149), Expect = 9e-10, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 25 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
D D IK+F+GQIPR++DE DL +F E+G++Y + VL+D+ TG KG
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKG 96
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 23 QPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
QP K+FVG + + E D+ ++F +G + +LR G SKG
Sbjct: 146 QPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGP-DGNSKG 193
>sp|Q8N6W0|CELF5_HUMAN CUGBP Elav-like family member 5 OS=Homo sapiens GN=CELF5 PE=1
SV=1
Length = 485
Score = 61.6 bits (148), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 8/61 (13%)
Query: 19 SLPEQP--------DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
S PE P D D IK+FVGQIPR +DE DL +F ++GR+Y + VL+D TG K
Sbjct: 27 SGPEPPGGQPDGMKDLDAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHK 86
Query: 71 G 71
G
Sbjct: 87 G 87
Score = 35.8 bits (81), Expect = 0.076, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 26 PDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
P+ +F+ +P+ + +LT+MF +G + + V D+ T QSK
Sbjct: 397 PEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSK 441
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
K+FVG + + E D+ ++F +G + VLR G SKG
Sbjct: 135 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGP-DGSSKG 175
>sp|A0JM51|CELF5_XENTR CUGBP Elav-like family member 5 OS=Xenopus tropicalis GN=celf5
PE=2 SV=1
Length = 486
Score = 61.6 bits (148), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 8/62 (12%)
Query: 18 MSLPEQP--------DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQS 69
MS PE P D D IK+FVGQIPR+++E DL +F ++G++Y + VL+D+ TG
Sbjct: 28 MSGPEPPAQQSDSMKDLDAIKLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMH 87
Query: 70 KG 71
KG
Sbjct: 88 KG 89
Score = 36.2 bits (82), Expect = 0.069, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 20 LPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
L ++ P+ +F+ +P+ + +LT+MF +G + + V D+ T QSK
Sbjct: 392 LQQREGPEGCNLFIYHLPQEFGDNELTQMFLPFGNIISSKVFMDRATNQSK 442
Score = 32.3 bits (72), Expect = 0.82, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
K+FVG + + E ++T MF +G + +VLR G SKG
Sbjct: 136 KLFVGMLSKQQSEEEVTSMFQAFGSIEECSVLRGP-DGSSKG 176
>sp|Q8CIN6|CELF3_MOUSE CUGBP Elav-like family member 3 OS=Mus musculus GN=Celf3 PE=2
SV=1
Length = 465
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 25 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
+PD IK+FVGQIPR ++E DL +F ++GR++ + V++DK TG KG
Sbjct: 3 EPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKG 49
Score = 35.8 bits (81), Expect = 0.091, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 26 PDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
PD +F+ +P+ ++++ +MF +G V + V D+ T QSK
Sbjct: 377 PDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSK 421
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
K+FVG + + + D+ KMF +G + VLR G SKG
Sbjct: 95 KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTSKG 135
>sp|Q5SZQ8|CELF3_HUMAN CUGBP Elav-like family member 3 OS=Homo sapiens GN=CELF3 PE=1
SV=1
Length = 465
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 25 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
+PD IK+FVGQIPR ++E DL +F ++GR++ + V++DK TG KG
Sbjct: 3 EPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKG 49
Score = 35.4 bits (80), Expect = 0.094, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 26 PDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
PD +F+ +P+ ++++ +MF +G V + V D+ T QSK
Sbjct: 377 PDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSK 421
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
K+FVG + + + D+ KMF +G + VLR G SKG
Sbjct: 96 KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTSKG 136
>sp|Q08E07|CELF3_BOVIN CUGBP Elav-like family member 3 OS=Bos taurus GN=CELF3 PE=2 SV=1
Length = 461
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 25 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
+PD IK+FVGQIPR ++E DL +F ++GR++ + V++DK TG KG
Sbjct: 3 EPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKG 49
Score = 35.4 bits (80), Expect = 0.094, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 26 PDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
PD +F+ +P+ ++++ +MF +G V + V D+ T QSK
Sbjct: 373 PDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSK 417
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
K+FVG + + + D+ KMF +G + VLR G SKG
Sbjct: 96 KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTSKG 136
>sp|Q9IBD1|CELF3_DANRE CUGBP Elav-like family member 3 OS=Danio rerio GN=celf3 PE=2 SV=2
Length = 452
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 36/47 (76%)
Query: 25 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
+ D IK+F+GQIPR+++E DL +F ++G++Y + V++DK TG KG
Sbjct: 3 EADAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKG 49
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
K+FVG + + + +AD+ KMF +G + VLR G SKG
Sbjct: 95 KLFVGMLGKQLSDADVRKMFEPFGSIEECTVLRGP-DGASKG 135
Score = 33.5 bits (75), Expect = 0.38, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 26/45 (57%)
Query: 26 PDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 70
P+ +F+ +P+ ++++ +MF +G V + V D+ T QSK
Sbjct: 364 PEGCNIFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSK 408
>sp|Q8R0F5|RBMX2_MOUSE RNA-binding motif protein, X-linked 2 OS=Mus musculus GN=Rbmx2
PE=1 SV=1
Length = 326
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 31/42 (73%)
Query: 31 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGL 72
+FVG +P + E D+ +FS+YG + NIN++RDK TG+SKG
Sbjct: 38 IFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGF 79
>sp|Q10B98|C3H25_ORYSJ Zinc finger CCCH domain-containing protein 25 OS=Oryza sativa
subsp. japonica GN=Os03g0826400 PE=2 SV=1
Length = 312
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 27 DFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGL 72
D +FVG IP + E DL +F++YG V ++N++RDK TG+SKG
Sbjct: 34 DSAYVFVGGIPYDLTEGDLLAVFAQYGEVVDVNLVRDKGTGKSKGF 79
>sp|B0BN49|RBMX2_RAT RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus
GN=Rbmx2 PE=2 SV=1
Length = 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 31 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGL 72
+F+G +P + E D+ +FS+YG + NIN++RDK TG+SKG
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGF 79
>sp|Q9SD61|C3H42_ARATH Zinc finger CCCH domain-containing protein 42 OS=Arabidopsis
thaliana GN=At3g47120 PE=2 SV=1
Length = 352
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 31 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGL 72
++VG IP + E DL +FS+YG + ++N++RDK TG+SKG
Sbjct: 38 VYVGGIPFDLTEGDLLAVFSQYGEIVDVNLIRDKGTGKSKGF 79
>sp|Q9Y388|RBMX2_HUMAN RNA-binding motif protein, X-linked 2 OS=Homo sapiens GN=RBMX2
PE=1 SV=2
Length = 322
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 31 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGL 72
+F+G +P + E D+ +FS+YG + NIN++RDK TG+SKG
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGF 79
>sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris
PE=1 SV=1
Length = 315
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 16 RSMSLPEQPDPDF---IKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGL 72
R PE+P F +++VG IP +D+A L ++FSE+G+V + V+ D+ TG+S+G
Sbjct: 214 RRGERPERPPRTFEQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGF 273
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGL 72
K+FVG +P +D L ++F + G V V+ ++ T QS+G
Sbjct: 137 KLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGF 179
>sp|O04425|FCA_ARATH Flowering time control protein FCA OS=Arabidopsis thaliana GN=FCA
PE=1 SV=2
Length = 747
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 29 IKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
+K+FVG +PR+ E ++ F ++G V + +++DK TGQ +G
Sbjct: 120 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQG 162
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
K+FVG + + E ++ ++F ++G V ++ ++RD+ QS+G
Sbjct: 212 KLFVGSLNKQATEKEVEEIFLQFGHVEDVYLMRDEYR-QSRG 252
>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris
PE=2 SV=1
Length = 291
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 18 MSLPEQPD-PDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGL 72
+ + EQP + +K+FVG +P S+D A L +F G V + V+ DK+TG+S+G
Sbjct: 75 VEVAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGF 130
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 28/43 (65%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGL 72
+++VG + +D+ L ++FSE G V + V+ D+ +G+S+G
Sbjct: 208 RVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGF 250
>sp|P70372|ELAV1_MOUSE ELAV-like protein 1 OS=Mus musculus GN=Elavl1 PE=1 SV=2
Length = 326
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 23 QPDPDFIK---MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGL 72
+P + IK +++ +PR+M + D+ MFS +GR+ N VL D+ TG S+G+
Sbjct: 97 RPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGV 149
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 31 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
+ V +P++M + +L +FS G V + ++RDKV G S G
Sbjct: 22 LIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLG 62
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 31 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGL 72
+F+ + + DE L +MF +G V N+ V+RD T + KG
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGF 287
>sp|Q15717|ELAV1_HUMAN ELAV-like protein 1 OS=Homo sapiens GN=ELAVL1 PE=1 SV=2
Length = 326
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 23 QPDPDFIK---MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGL 72
+P + IK +++ +PR+M + D+ MFS +GR+ N VL D+ TG S+G+
Sbjct: 97 RPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGV 149
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 31 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
+ V +P++M + +L +FS G V + ++RDKV G S G
Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLG 62
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 31 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGL 72
+F+ + + DE L +MF +G V N+ V+RD T + KG
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGF 287
>sp|Q00916|RU17_YEAST U1 small nuclear ribonucleoprotein 70 kDa homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SNP1 PE=1
SV=1
Length = 300
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 25 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
DP + +F+G++P +DE +L K F ++G + I +++DK+T +SKG
Sbjct: 104 DP-YRTIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKG 149
>sp|Q91584|ELAV3_XENLA ELAV-like protein 3 OS=Xenopus laevis GN=elavl3 PE=2 SV=1
Length = 348
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 32/42 (76%)
Query: 31 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGL 72
++V +P++M++ ++ ++FS+YGR+ +L D+VTG S+G+
Sbjct: 122 LYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGVSRGV 163
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 23 QPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
+ D + V +P++M + + +F G + + ++RDK+TGQS G
Sbjct: 28 EADDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLG 76
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 31 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGL 72
+FV + DE+ L ++F +G V N+ V+RD T + KG
Sbjct: 267 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGF 308
>sp|O17310|SXL_MUSDO Sex-lethal homolog OS=Musca domestica GN=SXL PE=2 SV=1
Length = 324
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Query: 23 QPDPDFIK---MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGL 72
+P + IK ++V +PR++ + +L K+F +YG + N+LRDK+TG+ +G+
Sbjct: 179 RPGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGV 231
>sp|O97018|SXL_CHRRU Sex-lethal homolog OS=Chrysomya rufifacies GN=SXL PE=2 SV=2
Length = 307
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Query: 23 QPDPDFIK---MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGL 72
+P + IK ++V +PR++ + +L K+F +YG + N+LRDK+TG+ +G+
Sbjct: 162 RPGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGV 214
>sp|Q28GD4|ELAV2_XENTR ELAV-like protein 2 OS=Xenopus tropicalis GN=elavl2 PE=2 SV=2
Length = 375
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 31/42 (73%)
Query: 31 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGL 72
++V +P++M + +L ++FS+YGR+ +L D+VTG S+G+
Sbjct: 155 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGV 196
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 31 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 71
+ V +P++M + +L +F G + + ++RDK+TGQS G
Sbjct: 69 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLG 109
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 31 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGL 72
+FV + DE+ L +MF +G V N+ V+RD T + KG
Sbjct: 294 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGF 335
>sp|Q91903|ELAV2_XENLA ELAV-like protein 2 OS=Xenopus laevis GN=elavl2 PE=1 SV=2
Length = 389
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 31/42 (73%)
Query: 31 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGL 72
++V +P++M + +L ++FS+YGR+ +L D+VTG S+G+
Sbjct: 155 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGV 196
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 31 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGL 72
+FV + DE+ L +MF +G V N+ V+RD T + KG
Sbjct: 308 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGF 349
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 31 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVT-GQSKG 71
+ V +P++M + +L +F G + + ++RDK+T GQS G
Sbjct: 68 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITEGQSLG 109
>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris
PE=1 SV=1
Length = 276
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 32/43 (74%)
Query: 30 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGL 72
+++VG IP +D+A L ++FSE+G+V + V+ D+ +G+S+G
Sbjct: 192 RIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGF 234
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 22 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGL 72
++P D K+FVG +P +D L ++F + G V V+ ++ T +S+G
Sbjct: 91 QEPSED-AKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGF 140
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,024,052
Number of Sequences: 539616
Number of extensions: 1049666
Number of successful extensions: 3579
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 2750
Number of HSP's gapped (non-prelim): 851
length of query: 88
length of database: 191,569,459
effective HSP length: 58
effective length of query: 30
effective length of database: 160,271,731
effective search space: 4808151930
effective search space used: 4808151930
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)