BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6968
(93 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VHH5|AGAP3_MOUSE Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3
OS=Mus musculus GN=Agap3 PE=1 SV=1
Length = 910
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 72/78 (92%)
Query: 8 DTFVTSHEFTLARDVPDLRLGIVGSLASGKSALVHRFMTGAFLQEESPEGGRFKKEVVID 67
D+FV S E+TL+R VP+L++GIVG+L+SGKSALVHR++TG ++QEESPEGGRFKKE+V+D
Sbjct: 110 DSFVNSQEWTLSRSVPELKVGIVGNLSSGKSALVHRYLTGTYVQEESPEGGRFKKEIVVD 169
Query: 68 GHSHLLLIRDEGVPPELQ 85
G S+LLLIRDEG PPELQ
Sbjct: 170 GQSYLLLIRDEGGPPELQ 187
>sp|Q96P47|AGAP3_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3
OS=Homo sapiens GN=AGAP3 PE=1 SV=2
Length = 875
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 72/78 (92%)
Query: 8 DTFVTSHEFTLARDVPDLRLGIVGSLASGKSALVHRFMTGAFLQEESPEGGRFKKEVVID 67
D+FV S E+TL+R VP+L++GIVG+L+SGKSALVHR++TG ++QEESPEGGRFKKE+V+D
Sbjct: 75 DSFVNSQEWTLSRSVPELKVGIVGNLSSGKSALVHRYLTGTYVQEESPEGGRFKKEIVVD 134
Query: 68 GHSHLLLIRDEGVPPELQ 85
G S+LLLIRDEG PPELQ
Sbjct: 135 GQSYLLLIRDEGGPPELQ 152
>sp|Q6NRL1|AGAP1_XENLA Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1
OS=Xenopus laevis GN=agap1 PE=2 SV=1
Length = 864
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 70/78 (89%)
Query: 8 DTFVTSHEFTLARDVPDLRLGIVGSLASGKSALVHRFMTGAFLQEESPEGGRFKKEVVID 67
D FV S E+TL+R VP+L++GIVG+LASGKSALVHR++TG ++QEESPEGGRFKKE+V+D
Sbjct: 55 DAFVNSQEWTLSRSVPELKVGIVGNLASGKSALVHRYLTGTYVQEESPEGGRFKKEIVVD 114
Query: 68 GHSHLLLIRDEGVPPELQ 85
G S+LLLIRDEG PPE Q
Sbjct: 115 GQSYLLLIRDEGGPPEAQ 132
>sp|Q9UPQ3|AGAP1_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1
OS=Homo sapiens GN=AGAP1 PE=1 SV=4
Length = 857
Score = 125 bits (315), Expect = 6e-29, Method: Composition-based stats.
Identities = 57/78 (73%), Positives = 70/78 (89%)
Query: 8 DTFVTSHEFTLARDVPDLRLGIVGSLASGKSALVHRFMTGAFLQEESPEGGRFKKEVVID 67
D FV S E+TL+R VP+L++GIVG+LASGKSALVHR++TG ++QEESPEGGRFKKE+V+D
Sbjct: 55 DAFVNSQEWTLSRSVPELKVGIVGNLASGKSALVHRYLTGTYVQEESPEGGRFKKEIVVD 114
Query: 68 GHSHLLLIRDEGVPPELQ 85
G S+LLLIRDEG PPE Q
Sbjct: 115 GQSYLLLIRDEGGPPEAQ 132
>sp|Q8BXK8|AGAP1_MOUSE Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1
OS=Mus musculus GN=Agap1 PE=2 SV=1
Length = 857
Score = 125 bits (314), Expect = 7e-29, Method: Composition-based stats.
Identities = 57/78 (73%), Positives = 70/78 (89%)
Query: 8 DTFVTSHEFTLARDVPDLRLGIVGSLASGKSALVHRFMTGAFLQEESPEGGRFKKEVVID 67
D FV S E+TL+R VP+L++GIVG+LASGKSALVHR++TG ++QEESPEGGRFKKE+V+D
Sbjct: 55 DAFVNSQEWTLSRSVPELKVGIVGNLASGKSALVHRYLTGTYVQEESPEGGRFKKEIVVD 114
Query: 68 GHSHLLLIRDEGVPPELQ 85
G S+LLLIRDEG PPE Q
Sbjct: 115 GQSYLLLIRDEGGPPEAQ 132
>sp|Q9NGC3|CEG1A_DROME Centaurin-gamma-1A OS=Drosophila melanogaster GN=cenG1A PE=2 SV=2
Length = 995
Score = 124 bits (310), Expect = 2e-28, Method: Composition-based stats.
Identities = 59/78 (75%), Positives = 70/78 (89%)
Query: 8 DTFVTSHEFTLARDVPDLRLGIVGSLASGKSALVHRFMTGAFLQEESPEGGRFKKEVVID 67
D+FV S E+T++R VPDLRLGIVGSL SGKSALVHR++TG+++QEESPEGGRFKKEV ID
Sbjct: 126 DSFVNSQEWTISRSVPDLRLGIVGSLNSGKSALVHRYLTGSYMQEESPEGGRFKKEVFID 185
Query: 68 GHSHLLLIRDEGVPPELQ 85
G S+LLLIRDEG PE+Q
Sbjct: 186 GQSYLLLIRDEGGAPEMQ 203
>sp|Q8CGU4|AGAP2_RAT Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2
OS=Rattus norvegicus GN=Agap2 PE=1 SV=1
Length = 1186
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 63/84 (75%)
Query: 2 KMSSNSDTFVTSHEFTLARDVPDLRLGIVGSLASGKSALVHRFMTGAFLQEESPEGGRFK 61
++ ++ V S E+TL+R +P+LRLG++G + SGKS+L+HRF+TG++ E PE ++K
Sbjct: 378 ELRASPKAVVNSQEWTLSRSIPELRLGVLGDVRSGKSSLIHRFLTGSYQVLEKPESEQYK 437
Query: 62 KEVVIDGHSHLLLIRDEGVPPELQ 85
KE+++DG +HL+LIR+E P+ +
Sbjct: 438 KEMLVDGQTHLVLIREEAGAPDAK 461
>sp|Q3UHD9|AGAP2_MOUSE Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2
OS=Mus musculus GN=Agap2 PE=1 SV=1
Length = 1186
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 62/84 (73%)
Query: 2 KMSSNSDTFVTSHEFTLARDVPDLRLGIVGSLASGKSALVHRFMTGAFLQEESPEGGRFK 61
++ ++ V S E+TL+R +P+LRLG++G + SGKS+L+HRF+TG++ E E ++K
Sbjct: 378 ELRTSPKAVVNSQEWTLSRSIPELRLGVLGDVRSGKSSLIHRFLTGSYQVLEKIESEQYK 437
Query: 62 KEVVIDGHSHLLLIRDEGVPPELQ 85
KE+++DG +HL+LIR+E P+ +
Sbjct: 438 KEMLVDGQTHLVLIREEAGAPDAK 461
>sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2
OS=Homo sapiens GN=AGAP2 PE=1 SV=2
Length = 1192
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 61/84 (72%)
Query: 2 KMSSNSDTFVTSHEFTLARDVPDLRLGIVGSLASGKSALVHRFMTGAFLQEESPEGGRFK 61
++ ++ + S E+TL+R +P+LRLG++G SGKS+L+HRF+TG++ E E ++K
Sbjct: 384 ELRASPKAVINSQEWTLSRSIPELRLGVLGDARSGKSSLIHRFLTGSYQVLEKTESEQYK 443
Query: 62 KEVVIDGHSHLLLIRDEGVPPELQ 85
KE+++DG +HL+LIR+E P+ +
Sbjct: 444 KEMLVDGQTHLVLIREEAGAPDAK 467
>sp|Q86JC8|RABH_DICDI Ras-related protein RabH OS=Dictyostelium discoideum GN=rabH PE=3
SV=1
Length = 198
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 18 LARDVPDLRLGIVGSLASGKSALVHRFMTGAFLQEESPEGGR--FKKEVVIDGHSHLLLI 75
+ +D L+L I+G GKS+L++RF F ++ G F K V+I G S L I
Sbjct: 1 MIKDNIKLKLTIIGDWNVGKSSLLYRFFNDVFYEQTKLSMGEHFFYKTVLIRGESIDLQI 60
Query: 76 RDEGVPPELQPPNPS 90
D + + N S
Sbjct: 61 TDTSGMEKFRSLNNS 75
>sp|Q6IMA3|RSLBA_RAT Ras-like protein family member 11A OS=Rattus norvegicus
GN=Rasl11a PE=2 SV=2
Length = 242
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 24 DLRLGIVGSLASGKSALVHRFMTGAFLQEESPEGGR-FKKEVVIDGHSHLLLIRD 77
D++L ++G+ GKSA++ RF+T F+ + P G+ + + V ++G L I+D
Sbjct: 27 DIKLAVLGASCVGKSAMIVRFLTKRFIGDYEPNTGKLYSRLVYVEGDQLSLQIQD 81
>sp|Q55FU9|RAB24_DICDI Ras-related protein Rab-24 OS=Dictyostelium discoideum GN=rab24
PE=3 SV=1
Length = 202
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 24 DLRLGIVGSLASGKSALVHRFMTGAFLQEESPEGGRFKKEVVIDGHSHLLL-IRDEGVPP 82
DL++ ++G + GK+ +V R+ +G F + GG F + V+ G + +LL I D
Sbjct: 7 DLKVVLLGYASVGKTCIVTRYTSGQFGDTHTTIGGAFSSKRVVVGETEVLLGIWDTAGTE 66
Query: 83 ELQPPNPS 90
Q N S
Sbjct: 67 RYQAVNVS 74
>sp|Q6IMB1|RSLBA_MOUSE Ras-like protein family member 11A OS=Mus musculus GN=Rasl11a
PE=1 SV=1
Length = 242
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 24 DLRLGIVGSLASGKSALVHRFMTGAFLQEESPEGGR-FKKEVVIDGHSHLLLIRD 77
D++L ++G+ GKSA++ RF+T F+ + P G+ + + V ++G L I+D
Sbjct: 27 DIKLAVLGAGCVGKSAMIVRFLTKRFIGDYEPNTGKLYSRLVYVEGDQLSLQIQD 81
>sp|Q6P0U3|RSLBB_DANRE Ras-like protein family member 11B OS=Danio rerio GN=rasl11b PE=2
SV=1
Length = 244
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 25 LRLGIVGSLASGKSALVHRFMTGAFLQE-ESPEGGRFKKEVVIDGHSHLLLIRD 77
+++ ++G GK+ALV RF+T F+ + E G + +EV IDG + ++D
Sbjct: 24 IKIAVIGGSGVGKTALVVRFLTKRFIGDYERNVGNLYSREVQIDGEQVAIQVQD 77
>sp|P01115|RASH_MSVHA Transforming protein p29 OS=Harvey murine sarcoma virus GN=H-RAS
PE=1 SV=1
Length = 241
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 24 DLRLGIVGSLASGKSALVHRFMTGAFLQEESPE-GGRFKKEVVIDGHSHLLLIRD 77
+ +L +VG+ GKSAL + + F+ E P ++K+VVIDG + LL I D
Sbjct: 55 EYKLVVVGARGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILD 109
>sp|Q8AVS6|RSLBB_XENLA Ras-like protein family member 11B OS=Xenopus laevis GN=rasl11b
PE=2 SV=1
Length = 248
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 25 LRLGIVGSLASGKSALVHRFMTGAFLQE-ESPEGGRFKKEVVIDGHSHLLLIRD 77
+++ +VG GK+ALV RF+T F+ + E G + ++V IDG + + ++D
Sbjct: 35 IKIAVVGGSGVGKTALVVRFLTKRFIGDYERNAGNLYSRQVQIDGTNLAIQVQD 88
>sp|Q6T310|RSLBA_HUMAN Ras-like protein family member 11A OS=Homo sapiens GN=RASL11A
PE=2 SV=1
Length = 242
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 12 TSHEFTLARDVPDLRLGIVGSLASGKSALVHRFMTGAFLQEESPEGGR-FKKEVVIDGHS 70
+S ++ L +D+ +L ++G+ GKSA++ RF+T F+ + P G+ + + V ++G
Sbjct: 18 SSSDYLLPKDI---KLAVLGAGRVGKSAMIVRFLTKRFIGDYEPNTGKLYSRLVYVEGDQ 74
Query: 71 HLLLIRD 77
L I+D
Sbjct: 75 LSLQIQD 81
>sp|Q5FVY2|RSLBB_XENTR Ras-like protein family member 11B OS=Xenopus tropicalis
GN=rasl11b PE=2 SV=1
Length = 247
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 25 LRLGIVGSLASGKSALVHRFMTGAFLQE-ESPEGGRFKKEVVIDGHSHLLLIRD 77
+++ +VG GK+ALV RF+T F+ + E G + ++V IDG + + ++D
Sbjct: 34 IKIAVVGGSGVGKTALVVRFLTKRFIGDYERNAGNLYSRQVQIDGMNLAIQVQD 87
>sp|Q9BPW5|RSLBB_HUMAN Ras-like protein family member 11B OS=Homo sapiens GN=RASL11B
PE=2 SV=1
Length = 248
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 25 LRLGIVGSLASGKSALVHRFMTGAFLQE-ESPEGGRFKKEVVIDGHSHLLLIRD 77
+++ +VG+ GK+ALV RF+T F+ + E G + ++V I+G + L ++D
Sbjct: 34 VKIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQD 87
>sp|P01117|RASK_MSVKI GTPase KRas OS=Kirsten murine sarcoma virus GN=K-RAS PE=1 SV=1
Length = 189
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 22 VPDLRLGIVGSLASGKSALVHRFMTGAFLQEESPE-GGRFKKEVVIDGHSHLLLIRD 77
+ + +L +VG+ GKSAL + + F+ E P ++K+VVIDG + LL I D
Sbjct: 1 MTEYKLVVVGASGVGKSALTIQLIQNHFVDEYDPTIQDSYRKQVVIDGETCLLDILD 57
>sp|P23175|RASH_MSVNS GTPase HRas OS=Murine sarcoma virus NS.C58 GN=H-RAS PE=3 SV=1
Length = 189
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 22 VPDLRLGIVGSLASGKSALVHRFMTGAFLQEESPE-GGRFKKEVVIDGHSHLLLIRD 77
+ + +L +VG+ GKSAL + + F+ E P ++K+VVIDG + LL I D
Sbjct: 1 MTEYKLVVVGARGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILD 57
>sp|P01113|RASH_MSVMO GTPase HRas OS=Moloney murine sarcoma virus GN=H-RAS PE=3 SV=1
Length = 189
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 22 VPDLRLGIVGSLASGKSALVHRFMTGAFLQEESPE-GGRFKKEVVIDGHSHLLLIRD 77
+ + +L +VG+ GKSAL + + F+ E P ++K+VVIDG + LL I D
Sbjct: 1 MTEYKLVVVGAKGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILD 57
>sp|P01114|RASH_RRASV Transforming protein p29 OS=Rasheed rat sarcoma virus GN=RAS PE=3
SV=1
Length = 248
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 22 VPDLRLGIVGSLASGKSALVHRFMTGAFLQEESPE-GGRFKKEVVIDGHSHLLLIRD 77
+ + +L +VG+ GKSAL + + F+ E P ++K+VVIDG + LL I D
Sbjct: 60 MTEYKLVVVGARGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILD 116
>sp|Q8VEA8|RAB7B_MOUSE Ras-related protein Rab-7b OS=Mus musculus GN=Rab7b PE=1 SV=1
Length = 199
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 20 RDVPDLRLGIVGSLASGKSALVHRFMTGAFLQEESPEGGR--FKKEVVIDGHSHLLLIRD 77
R DL+L IVG+L GK++L+H+++ F +E G K +++D + L I D
Sbjct: 4 RKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQIWD 63
Query: 78 EG 79
G
Sbjct: 64 TG 65
>sp|Q5E9J3|RSLBB_BOVIN Ras-like protein family member 11B OS=Bos taurus GN=RASL11B PE=2
SV=1
Length = 248
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 25 LRLGIVGSLASGKSALVHRFMTGAFLQE-ESPEGGRFKKEVVIDGHSHLLLIRD 77
+++ +VG+ GK+ALV RF+T F+ + E G + ++V I+G + + ++D
Sbjct: 34 VKIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLAIQVQD 87
>sp|Q96AH8|RAB7B_HUMAN Ras-related protein Rab-7b OS=Homo sapiens GN=RAB7B PE=2 SV=1
Length = 199
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 20 RDVPDLRLGIVGSLASGKSALVHRFMTGAFLQE-ESPEGGRFKKEVVIDGHSHL-LLIRD 77
R DL+L IVG++ GK++L+H+++ F +E ++ G +++I G + L L I D
Sbjct: 4 RKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQIWD 63
Query: 78 EG 79
G
Sbjct: 64 TG 65
>sp|Q6TEN1|RAP1B_DANRE Ras-related protein Rap-1b OS=Danio rerio GN=rap1b PE=2 SV=1
Length = 184
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 24 DLRLGIVGSLASGKSALVHRFMTGAFLQEESPE-GGRFKKEVVIDGHSHLLLIRD 77
+ +L ++GS GKSAL +F+ G F+++ P ++K+V +DG +L I D
Sbjct: 3 EYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILD 57
>sp|Q9YH37|RAP1B_CYPCA Ras-related protein Rap-1b OS=Cyprinus carpio GN=rap1b PE=2 SV=1
Length = 184
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 24 DLRLGIVGSLASGKSALVHRFMTGAFLQEESPE-GGRFKKEVVIDGHSHLLLIRD 77
+ +L ++GS GKSAL +F+ G F+++ P ++K+V +DG +L I D
Sbjct: 3 EYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILD 57
>sp|Q922H7|RSLBB_MOUSE Ras-like protein family member 11B OS=Mus musculus GN=Rasl11b
PE=2 SV=1
Length = 247
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 25 LRLGIVGSLASGKSALVHRFMTGAFLQE-ESPEGGRFKKEVVIDGHSHLLLIRD 77
+++ +VG+ GK+ALV RF+T F+ + E G + ++V I+G + + ++D
Sbjct: 33 VKIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVHIEGETLAIQVQD 86
>sp|Q640R7|RAP1B_XENTR Ras-related protein Rap-1b OS=Xenopus tropicalis GN=rap1b PE=2
SV=1
Length = 184
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 24 DLRLGIVGSLASGKSALVHRFMTGAFLQEESPE-GGRFKKEVVIDGHSHLLLIRD 77
+ +L ++GS GKSAL +F+ G F+++ P ++K+V +DG +L I D
Sbjct: 3 EYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILD 57
>sp|Q7ZXH7|RAP1B_XENLA Ras-related protein Rap-1b OS=Xenopus laevis GN=rap1b PE=2 SV=1
Length = 184
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 24 DLRLGIVGSLASGKSALVHRFMTGAFLQEESPE-GGRFKKEVVIDGHSHLLLIRD 77
+ +L ++GS GKSAL +F+ G F+++ P ++K+V +DG +L I D
Sbjct: 3 EYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILD 57
>sp|Q6IMA7|RSLBB_RAT Ras-like protein family member 11B OS=Rattus norvegicus
GN=Rasl11b PE=2 SV=1
Length = 247
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 25 LRLGIVGSLASGKSALVHRFMTGAFLQE-ESPEGGRFKKEVVIDGHSHLLLIRD 77
+++ +VG+ GK+ALV RF+T F+ + E G + ++V I+G + + ++D
Sbjct: 33 VKIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVHIEGETLAIQVQD 86
>sp|A1DZY4|RSLBL_DANRE Ras-like protein family member 11A-like OS=Danio rerio
GN=zgc:110179 PE=2 SV=1
Length = 253
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 3 MSSNSDTF--VTSHEFTLARDVPD--LRLGIVGSLASGKSALVHRFMTGAFLQE-ESPEG 57
MSS S F V E+ + VP+ +++ ++G+ GK+AL+ RF+T F+ + E+ G
Sbjct: 11 MSSGSSNFLLVPIPEYPVLDCVPNKNVKIVVLGASNVGKTALIVRFLTKRFIGDYEANTG 70
Query: 58 GRFKKEVVIDGHSHLLLIRD 77
+ +++ +DG L ++D
Sbjct: 71 ALYSRKINLDGEQVSLQVQD 90
>sp|Q94694|RAP1_PHYPO Ras-related protein Rap-1 OS=Physarum polycephalum GN=RAP1 PE=2
SV=1
Length = 188
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 24 DLRLGIVGSLASGKSALVHRFMTGAFLQEESPE-GGRFKKEVVIDGHSHLLLIRD 77
+ ++ ++GS GKSAL +F+ G F+++ P ++K+V +DG +L I D
Sbjct: 5 EFKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILD 59
>sp|Q08DE8|RAB7B_BOVIN Ras-related protein Rab-7b OS=Bos taurus GN=RAB7B PE=2 SV=1
Length = 200
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 20 RDVPDLRLGIVGSLASGKSALVHRFMTGAFLQEESPEGGR--FKKEVVIDGHSHLLLIRD 77
R DL+L I+G+L GK++L+HR++ F ++ G K ++++ + L I D
Sbjct: 4 RKKVDLKLIIIGALGVGKTSLLHRYVHKTFYEDYQTTLGASILSKIIILEDTTLKLQIWD 63
Query: 78 EG 79
G
Sbjct: 64 TG 65
>sp|Q7SZ59|RASLC_DANRE Ras-like protein family member 12 OS=Danio rerio GN=RASL12 PE=2
SV=1
Length = 255
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 24 DLRLGIVGSLASGKSALVHRFMTGAFLQEESPE-GGRFKKEVVIDGHSHLLLIRD 77
++ + I+G++ SGKSAL +F+T F+ E P + E V+D L+ + D
Sbjct: 23 EVNIVILGAMGSGKSALTVKFLTKRFISEYDPNLEDTYSSEEVVDQQPVLVKVMD 77
>sp|P48555|RALA_DROME Ras-related protein Ral-a OS=Drosophila melanogaster GN=Rala PE=2
SV=2
Length = 201
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 29 IVGSLASGKSALVHRFMTGAFLQEESP-EGGRFKKEVVIDGHSHLLLIRD 77
+VGS GKSAL +FM F+++ P + ++K+VV+DG + I D
Sbjct: 16 MVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILD 65
>sp|P63320|RALA_SAGOE Ras-related protein Ral-A OS=Saguinus oedipus GN=RALA PE=1 SV=1
Length = 206
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 29 IVGSLASGKSALVHRFMTGAFLQEESP-EGGRFKKEVVIDGHSHLLLIRD 77
+VGS GKSAL +FM F+++ P + ++K+VV+DG + I D
Sbjct: 19 MVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILD 68
>sp|P63322|RALA_RAT Ras-related protein Ral-A OS=Rattus norvegicus GN=Rala PE=1 SV=1
Length = 206
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 29 IVGSLASGKSALVHRFMTGAFLQEESP-EGGRFKKEVVIDGHSHLLLIRD 77
+VGS GKSAL +FM F+++ P + ++K+VV+DG + I D
Sbjct: 19 MVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILD 68
>sp|P63321|RALA_MOUSE Ras-related protein Ral-A OS=Mus musculus GN=Rala PE=1 SV=1
Length = 206
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 29 IVGSLASGKSALVHRFMTGAFLQEESP-EGGRFKKEVVIDGHSHLLLIRD 77
+VGS GKSAL +FM F+++ P + ++K+VV+DG + I D
Sbjct: 19 MVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILD 68
>sp|Q5RDM6|RAP1B_PONAB Ras-related protein Rap-1b OS=Pongo abelii GN=RAP1B PE=2 SV=1
Length = 184
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 24 DLRLGIVGSLASGKSALVHRFMTGAFLQEESPE-GGRFKKEVVIDGHSHLLLIRD 77
+ +L ++GS GKSAL +F+ G F+++ P ++K+V +D +L I D
Sbjct: 3 EYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILD 57
>sp|A5A6J7|RAP1B_PANTR Ras-related protein Rap-1b OS=Pan troglodytes GN=RAP1B PE=2 SV=1
Length = 184
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 24 DLRLGIVGSLASGKSALVHRFMTGAFLQEESPE-GGRFKKEVVIDGHSHLLLIRD 77
+ +L ++GS GKSAL +F+ G F+++ P ++K+V +D +L I D
Sbjct: 3 EYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILD 57
>sp|Q99JI6|RAP1B_MOUSE Ras-related protein Rap-1b OS=Mus musculus GN=Rap1b PE=2 SV=2
Length = 184
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 24 DLRLGIVGSLASGKSALVHRFMTGAFLQEESPE-GGRFKKEVVIDGHSHLLLIRD 77
+ +L ++GS GKSAL +F+ G F+++ P ++K+V +D +L I D
Sbjct: 3 EYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILD 57
>sp|Q4R9D4|RAP1B_MACFA Ras-related protein Rap-1b OS=Macaca fascicularis GN=RAP1B PE=2
SV=1
Length = 184
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 24 DLRLGIVGSLASGKSALVHRFMTGAFLQEESPE-GGRFKKEVVIDGHSHLLLIRD 77
+ +L ++GS GKSAL +F+ G F+++ P ++K+V +D +L I D
Sbjct: 3 EYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILD 57
>sp|P61224|RAP1B_HUMAN Ras-related protein Rap-1b OS=Homo sapiens GN=RAP1B PE=1 SV=1
Length = 184
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 24 DLRLGIVGSLASGKSALVHRFMTGAFLQEESPE-GGRFKKEVVIDGHSHLLLIRD 77
+ +L ++GS GKSAL +F+ G F+++ P ++K+V +D +L I D
Sbjct: 3 EYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILD 57
>sp|Q5ZHX1|RAP1B_CHICK Ras-related protein Rap-1b OS=Gallus gallus GN=RAP1B PE=2 SV=1
Length = 184
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 24 DLRLGIVGSLASGKSALVHRFMTGAFLQEESPE-GGRFKKEVVIDGHSHLLLIRD 77
+ +L ++GS GKSAL +F+ G F+++ P ++K+V +D +L I D
Sbjct: 3 EYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILD 57
>sp|P61223|RAP1B_BOVIN Ras-related protein Rap-1b OS=Bos taurus GN=RAP1B PE=2 SV=1
Length = 184
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 24 DLRLGIVGSLASGKSALVHRFMTGAFLQEESPE-GGRFKKEVVIDGHSHLLLIRD 77
+ +L ++GS GKSAL +F+ G F+++ P ++K+V +D +L I D
Sbjct: 3 EYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILD 57
>sp|Q62636|RAP1B_RAT Ras-related protein Rap-1b OS=Rattus norvegicus GN=Rap1b PE=2
SV=2
Length = 184
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 24 DLRLGIVGSLASGKSALVHRFMTGAFLQEESPE-GGRFKKEVVIDGHSHLLLIRD 77
+ +L ++GS GKSAL +F+ G F+++ P ++K+V +D +L I D
Sbjct: 3 EYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILD 57
>sp|P11233|RALA_HUMAN Ras-related protein Ral-A OS=Homo sapiens GN=RALA PE=1 SV=1
Length = 206
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 29 IVGSLASGKSALVHRFMTGAFLQEESP-EGGRFKKEVVIDGHSHLLLIRD 77
+VGS GKSAL +FM F+++ P + ++K+VV+DG + I D
Sbjct: 19 MVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILD 68
>sp|Q6IP71|RALBB_XENLA Ras-related protein ralB-B OS=Xenopus laevis GN=ralb-b PE=2 SV=1
Length = 206
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 29 IVGSLASGKSALVHRFMTGAFLQEESP-EGGRFKKEVVIDGHSHLLLIRD 77
+VGS GKSAL +FM F+++ P + ++K+VV+DG + I D
Sbjct: 19 MVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILD 68
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.135 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,165,351
Number of Sequences: 539616
Number of extensions: 1524492
Number of successful extensions: 5871
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 134
Number of HSP's that attempted gapping in prelim test: 5752
Number of HSP's gapped (non-prelim): 208
length of query: 93
length of database: 191,569,459
effective HSP length: 63
effective length of query: 30
effective length of database: 157,573,651
effective search space: 4727209530
effective search space used: 4727209530
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)