BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy697
(157 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 125 bits (313), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 76/104 (73%), Gaps = 1/104 (0%)
Query: 1 MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+G+ IGKG FG VY+G WHGEVA++++D++ D+E +AFK EV +R+TRHEN+VLFM
Sbjct: 37 IGELIGKGRFGQVYHGRWHGEVAIRLIDIER-DNEDQLKAFKREVMAYRQTRHENVVLFM 95
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
GACM PPHLAI+TS C G TLY+ + K +NK + Q+I
Sbjct: 96 GACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEI 139
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Query: 100 VGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE 154
+G++IS D+L+ CW+++ +RP F LM LEKLPK+ R SHP + +SAE
Sbjct: 268 MGKEIS-DILLFCWAFEQEERPTFTKLMDMLEKLPKRN---RRLSHPGHFWKSAE 318
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 1 MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+G RIG G FGTVY G WHG+VAVK+L+V ++ +AFK EV RKTRH N++LFM
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNILLFM 70
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
G K P LAIVT C G +LY ++HI + KF + K+ + +Q +Q
Sbjct: 71 GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 115
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 1 MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+G RIG G FGTVY G WHG+VAVK+L+V ++ +AFK EV RKTRH N++LFM
Sbjct: 14 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNILLFM 72
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
G K P LAIVT C G +LY ++HI + KF + K+ + +Q +Q
Sbjct: 73 GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 117
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 1 MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+G RIG G FGTVY G WHG+VAVK+L+V ++ +AFK EV RKTRH N++LFM
Sbjct: 17 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNILLFM 75
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
G K P LAIVT C G +LY ++HI + KF + K+ + +Q +Q
Sbjct: 76 GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 120
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 1 MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+G RIG G FGTVY G WHG+VAVK+L+V ++ +AFK EV RKTRH N++LFM
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNILLFM 70
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
G K P LAIVT C G +LY ++HI + KF + K+ + +Q +Q
Sbjct: 71 GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 115
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 1 MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+G RIG G FGTVY G WHG+VAVK+L+V ++ +AFK EV RKTRH N++LFM
Sbjct: 39 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNILLFM 97
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
G K P LAIVT C G +LY ++HI + KF + K+ + +Q +Q
Sbjct: 98 GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 142
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 1 MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+G RIG G FGTVY G WHG+VAVK+L+V ++ +AFK EV RKTRH N++LFM
Sbjct: 32 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNILLFM 90
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
G K P LAIVT C G +LY ++HI + KF + K+ + +Q +Q
Sbjct: 91 GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 135
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 1 MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+G RIG G FGTVY G WHG+VAVK+L+V ++ +AFK EV RKTRH N++LFM
Sbjct: 40 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNILLFM 98
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
G K P LAIVT C G +LY ++HI + KF + K+ + +Q +Q
Sbjct: 99 GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 143
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 104 bits (259), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 1 MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+G RIG G FGTVY G WHG+VAVK+L+V ++ +AFK EV RKTRH N++LFM
Sbjct: 17 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNILLFM 75
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
G K P LAIVT C G +LY ++HI + KF + K+ + +Q +Q
Sbjct: 76 GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 120
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 104 bits (259), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 1 MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+G RIG G FGTVY G WHG+VAVK+L+V ++ +AFK EV RKTRH N++LFM
Sbjct: 40 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNILLFM 98
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
G K P LAIVT C G +LY ++HI + KF + K+ + +Q +Q
Sbjct: 99 GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 143
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 102 bits (254), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 1 MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+G RIG G FGTVY G WHG+VAVK+L+V ++ +AFK EV RKTRH N++LFM
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNILLFM 70
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
G P LAIVT C G +LY ++HI + KF + K+ + +Q +Q
Sbjct: 71 GYS-TAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 115
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 101 bits (251), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 1 MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+G RIG G FGTVY G WHG+VAVK+L+V ++ +AFK EV RKTRH N++LFM
Sbjct: 16 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNILLFM 74
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
G K P LAIVT C G +LY ++H + KF + K+ + +Q ++
Sbjct: 75 GYSTK-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 119
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 100 bits (250), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 1 MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+G RIG G FGTVY G WHG+VAVK+L+V ++ +AFK EV RKTRH N++LFM
Sbjct: 28 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNILLFM 86
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
G K P LAIVT C G +LY ++H + KF + K+ + +Q ++
Sbjct: 87 GYSTK-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 131
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 99.4 bits (246), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 1 MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+G RIG G FGTVY G WHG+VAVK+L+V ++ +AFK EV RKTRH N++LFM
Sbjct: 28 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNILLFM 86
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
G P LAIVT C G +LY ++H + KF + K+ + +Q ++
Sbjct: 87 GYST-APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 131
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 97.1 bits (240), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 1 MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+ RIG G FGTVY G WHG+VAVK+L V E+ ++AF+ EV RKTRH N++LFM
Sbjct: 40 LSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQ-FQAFRNEVAVLRKTRHVNILLFM 98
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
G M +LAIVT C G +LY ++H+ + KF + ++ + +Q +Q
Sbjct: 99 G-YMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQ 143
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 72.4 bits (176), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 3 DRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
++IG G FGTV+ WHG +VAVK+L E+ E F EV ++ RH N+VLFMG
Sbjct: 43 EKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNE-FLREVAIMKRLRHPNIVLFMG 101
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNIH 86
A +PP+L+IVT + +LY +H
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLH 126
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKLPKKRI 138
++ CW+ +P RP F T+M L L K +
Sbjct: 271 IIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 3 DRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
++IG G FGTV+ WHG +VAVK+L E+ E F EV ++ RH N+VLFMG
Sbjct: 43 EKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNE-FLREVAIMKRLRHPNIVLFMG 101
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNIH 86
A +PP+L+IVT + +LY +H
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLH 126
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKLPKKRI 138
++ CW+ +P RP F T+M L L K +
Sbjct: 271 IIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 5 IGKGHFGTVYNGNWHG-EVAVKVLDVDYLDD-EKTWEAFKLEVTTFRKTRHENLVLFMGA 62
IG G FG VY W G EVAVK D +D +T E + E F +H N++ G
Sbjct: 15 IGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGV 74
Query: 63 CMKPPHLAIVTSKCNGHTL 81
C+K P+L +V G L
Sbjct: 75 CLKEPNLCLVMEFARGGPL 93
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Query: 3 DRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+++G G FG V G W VAVK L D L + + F EV H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 57 VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
+ G + PP + +VT +L + ++ F L +S Q+++
Sbjct: 84 IRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 132
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 87 IYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITL 126
I KE L + Q I +V+++CW++KP DRP F+ L
Sbjct: 237 IDKEGERLPRPEDCPQDI-YNVMVQCWAHKPEDRPTFVAL 275
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Query: 3 DRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+++G G FG V G W VAVK L D L + + F EV H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 57 VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
+ G + PP + +VT +L + ++ F L +S Q+++
Sbjct: 74 IRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 122
Score = 33.9 bits (76), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 87 IYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITL 126
I KE L + Q I +V+++CW++KP DRP F+ L
Sbjct: 227 IDKEGERLPRPEDCPQDI-YNVMVQCWAHKPEDRPTFVAL 265
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Query: 3 DRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+++G G FG V G W VAVK L D L + + F EV H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 57 VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
+ G + PP + +VT +L + ++ F L +S Q+++
Sbjct: 84 IRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 132
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 87 IYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITL 126
I KE L + Q I +V+++CW++KP DRP F+ L
Sbjct: 237 IDKEGERLPRPEDCPQDI-YNVMVQCWAHKPEDRPTFVAL 275
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Query: 3 DRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+++G G FG V G W VAVK L D L + + F EV H NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 57 VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
+ G + PP + +VT +L + ++ F L +S Q+++
Sbjct: 78 IRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 126
Score = 33.9 bits (76), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 87 IYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITL 126
I KE L + Q I +V+++CW++KP DRP F+ L
Sbjct: 231 IDKEGERLPRPEDCPQDI-YNVMVQCWAHKPEDRPTFVAL 269
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Query: 3 DRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+++G G FG V G W VAVK L D L + + F EV H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 57 VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
+ G + PP + +VT +L + ++ F L +S Q+++
Sbjct: 74 IRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 122
Score = 33.9 bits (76), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 87 IYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITL 126
I KE L + Q I +V+++CW++KP DRP F+ L
Sbjct: 227 IDKEGERLPRPEDCPQDI-YNVMVQCWAHKPEDRPTFVAL 265
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Query: 3 DRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+++G G FG V G W VAVK L D L + + F EV H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 57 VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
+ G + PP + +VT +L + ++ F L +S Q+++
Sbjct: 74 IRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 122
Score = 33.9 bits (76), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 87 IYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITL 126
I KE L + Q I +V+++CW++KP DRP F+ L
Sbjct: 227 IDKEGERLPRPEDCPQDIY-NVMVQCWAHKPEDRPTFVAL 265
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Query: 3 DRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+++G G FG V G W VAVK L D L + + F EV H NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 57 VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
+ G + PP + +VT +L + ++ F L +S Q+++
Sbjct: 78 IRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 126
Score = 33.9 bits (76), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 87 IYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITL 126
I KE L + Q I +V+++CW++KP DRP F+ L
Sbjct: 231 IDKEGERLPRPEDCPQDIY-NVMVQCWAHKPEDRPTFVAL 269
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
M ++G G FG VY G W VAVK L D ++ E+ F E ++ +H NLV
Sbjct: 15 MKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 70
Query: 58 LFMGACMKPPHLAIVTS 74
+G C + P I+T
Sbjct: 71 QLLGVCTREPPFYIITE 87
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + PSDRP F + ++ E +
Sbjct: 241 ELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
M ++G G +G VY G W VAVK L D ++ E+ F E ++ +H NLV
Sbjct: 18 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 73
Query: 58 LFMGACMKPPHLAIVTS 74
+G C + P I+T
Sbjct: 74 QLLGVCTREPPFYIITE 90
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + PSDRP F + ++ E +
Sbjct: 244 ELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
M ++G G +G VY G W VAVK L D ++ E+ F E ++ +H NLV
Sbjct: 22 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 77
Query: 58 LFMGACMKPPHLAIVTS 74
+G C + P I+T
Sbjct: 78 QLLGVCTREPPFYIITE 94
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + PSDRP F + ++ E +
Sbjct: 248 ELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
M ++G G +G VY G W VAVK L D ++ E+ F E ++ +H NLV
Sbjct: 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 279
Query: 58 LFMGACMKPPHLAIVT 73
+G C + P I+T
Sbjct: 280 QLLGVCTREPPFYIIT 295
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + PSDRP F + ++ E +
Sbjct: 450 ELMRACWQWNPSDRPSFAEIHQAFETM 476
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl
Tyrosine Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl
Tyrosine Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And
Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And
Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment
(Frag1) I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment
(Frag1) I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
M ++G G +G VY G W VAVK L D ++ E+ F E ++ +H NLV
Sbjct: 22 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 77
Query: 58 LFMGACMKPPHLAIVT 73
+G C + P I+T
Sbjct: 78 QLLGVCTREPPFYIIT 93
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + PSDRP F + ++ E +
Sbjct: 248 ELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
M ++G G +G VY G W VAVK L D ++ E+ F E ++ +H NLV
Sbjct: 22 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 77
Query: 58 LFMGACMKPPHLAIVT 73
+G C + P I+T
Sbjct: 78 QLLGVCTREPPFYIIT 93
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + PSDRP F + ++ E +
Sbjct: 248 ELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
M ++G G +G VY G W VAVK L D ++ E+ F E ++ +H NLV
Sbjct: 19 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 74
Query: 58 LFMGACMKPPHLAIVTS 74
+G C + P I+T
Sbjct: 75 QLLGVCTREPPFYIITE 91
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + PSDRP F + ++ E +
Sbjct: 245 ELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
M ++G G +G VY G W VAVK L D ++ E+ F E ++ +H NLV
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 72
Query: 58 LFMGACMKPPHLAIVT 73
+G C + P I+T
Sbjct: 73 QLLGVCTREPPFYIIT 88
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + PSDRP F + ++ E +
Sbjct: 243 ELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
M ++G G +G VY G W VAVK L D ++ E+ F E ++ +H NLV
Sbjct: 15 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 70
Query: 58 LFMGACMKPPHLAIVTS 74
+G C + P I+T
Sbjct: 71 QLLGVCTREPPFYIITE 87
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + PSDRP F + ++ E +
Sbjct: 241 ELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
M ++G G +G VY G W VAVK L D ++ E+ F E ++ +H NLV
Sbjct: 30 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 85
Query: 58 LFMGACMKPPHLAIVTS 74
+G C + P I+T
Sbjct: 86 QLLGVCTREPPFYIITE 102
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + PSDRP F + ++ E +
Sbjct: 256 ELMRACWQWNPSDRPSFAEIHQAFETM 282
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib
(Sti571, Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib
(Sti571, Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib
(Sti571, Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib
(Sti571, Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
M ++G G +G VY G W VAVK L D ++ E+ F E ++ +H NLV
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 72
Query: 58 LFMGACMKPPHLAIVTS 74
+G C + P I+T
Sbjct: 73 QLLGVCTREPPFYIITE 89
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + PSDRP F + ++ E +
Sbjct: 243 ELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound
To Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound
To Activated Abl Kinase Domain
Length = 278
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
M ++G G +G VY G W VAVK L D ++ E+ F E ++ +H NLV
Sbjct: 22 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 77
Query: 58 LFMGACMKPPHLAIVTS 74
+G C + P I+T
Sbjct: 78 QLLGVCTREPPFYIITE 94
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + PSDRP F + ++ E +
Sbjct: 248 ELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
M ++G G +G VY G W VAVK L D ++ E+ F E ++ +H NLV
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 72
Query: 58 LFMGACMKPPHLAIVT 73
+G C + P I+T
Sbjct: 73 QLLGVCTREPPFYIIT 88
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + PSDRP F + ++ E +
Sbjct: 243 ELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
M ++G G +G VY G W VAVK L D ++ E+ F E ++ +H NLV
Sbjct: 21 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 76
Query: 58 LFMGACMKPPHLAIVTS 74
+G C + P I+T
Sbjct: 77 QLLGVCTREPPFYIITE 93
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + PSDRP F + ++ E +
Sbjct: 247 ELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
M ++G G +G VY G W VAVK L D ++ E+ F E ++ +H NLV
Sbjct: 19 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 74
Query: 58 LFMGACMKPPHLAIVTS 74
+G C + P I+T
Sbjct: 75 QLLGVCTREPPFYIITE 91
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + PSDRP F + ++ E +
Sbjct: 245 ELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
M ++G G +G VY G W VAVK L D ++ E+ F E ++ +H NLV
Sbjct: 221 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 276
Query: 58 LFMGACMKPPHLAIVT 73
+G C + P I+T
Sbjct: 277 QLLGVCTREPPFYIIT 292
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + PSDRP F + ++ E +
Sbjct: 447 ELMRACWQWNPSDRPSFAEIHQAFETM 473
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
M ++G G +G VY G W VAVK L D ++ E+ F E ++ +H NLV
Sbjct: 19 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 74
Query: 58 LFMGACMKPPHLAIVTS 74
+G C + P I+T
Sbjct: 75 QLLGVCTREPPFYIITE 91
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + PSDRP F + ++ E +
Sbjct: 245 ELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
M ++G G +G VY G W VAVK L D ++ E+ F E ++ +H NLV
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 72
Query: 58 LFMGACMKPPHLAIVTS 74
+G C + P I+T
Sbjct: 73 QLLGVCTREPPFYIITE 89
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + PSDRP F + ++ E +
Sbjct: 243 ELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
M ++G G +G VY G W VAVK L D ++ E+ F E ++ +H NLV
Sbjct: 263 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 318
Query: 58 LFMGACMKPPHLAIVT 73
+G C + P I+T
Sbjct: 319 QLLGVCTREPPFYIIT 334
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + PSDRP F + ++ E +
Sbjct: 489 ELMRACWQWNPSDRPSFAEIHQAFETM 515
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By
5z-7-oxozeaenol
Length = 315
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 5 IGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGAC 63
+G+G FG V W +VA+K ++ E +AF +E+ + H N+V GAC
Sbjct: 17 VGRGAFGVVCKAKWRAKDVAIK-----QIESESERKAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 64 MKPPHLAIVTSKCNGHTLYTNIH 86
+ P + +V G +LY +H
Sbjct: 72 LNP--VCLVMEYAEGGSLYNVLH 92
Score = 26.2 bits (56), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 106 QDVLMKCWSYKPSDRPDFITLMKSLEKL 133
+ ++ +CWS PS RP ++K + L
Sbjct: 235 ESLMTRCWSKDPSQRPSMEEIVKIMTHL 262
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 5 IGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGAC 63
+G+G FG V W +VA+K ++ E +AF +E+ + H N+V GAC
Sbjct: 16 VGRGAFGVVCKAKWRAKDVAIK-----QIESESERKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 64 MKPPHLAIVTSKCNGHTLYTNIH 86
+ P + +V G +LY +H
Sbjct: 71 LNP--VCLVMEYAEGGSLYNVLH 91
Score = 25.8 bits (55), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 106 QDVLMKCWSYKPSDRPDFITLMKSLEKL 133
+ ++ +CWS PS RP ++K + L
Sbjct: 234 ESLMTRCWSKDPSQRPSMEEIVKIMTHL 261
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
M ++G G +G VY G W VAVK L D ++ E+ F E ++ +H NLV
Sbjct: 22 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 77
Query: 58 LFMGACMK-PPHLAIVTSKCNGHTL 81
+G C + PP I+ G+ L
Sbjct: 78 QLLGVCTREPPFYIIIEFMTYGNLL 102
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + PSDRP F + ++ E +
Sbjct: 248 ELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain
Bound With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain
Bound With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
M ++G G +G VY G W VAVK L D ++ E+ F E ++ +H NLV
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 72
Query: 58 LFMGACMK-PPHLAIVTSKCNGHTL 81
+G C + PP I+ G+ L
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLL 97
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + PSDRP F + ++ E +
Sbjct: 243 ELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex
With The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex
With The Inhibitor Pha-739358
Length = 286
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
M ++G G +G VY G W VAVK L D ++ E+ F E ++ +H NLV
Sbjct: 18 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 73
Query: 58 LFMGACMKPPHLAIV 72
+G C + P I+
Sbjct: 74 QLLGVCTREPPFYII 88
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + PSDRP F + ++ E +
Sbjct: 244 ELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase
Bound With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And
Overcomes Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And
Overcomes Mutation-B Resistance
Length = 288
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
M ++G G +G VY G W VAVK L D ++ E+ F E ++ +H NLV
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 72
Query: 58 LFMGACMKPPHLAIV 72
+G C + P I+
Sbjct: 73 QLLGVCTREPPFYII 87
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + PSDRP F + ++ E +
Sbjct: 243 ELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
M ++G G +G VY G W VAVK L D ++ E+ F E ++ +H NLV
Sbjct: 15 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 70
Query: 58 LFMGACMKPPHLAIV 72
+G C + P I+
Sbjct: 71 QLLGVCTREPPFYII 85
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + PSDRP F + ++ E +
Sbjct: 241 ELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
M ++G G +G VY G W VAVK L D ++ E+ F E ++ +H NLV
Sbjct: 36 MKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 91
Query: 58 LFMGACMKPPHLAIVT 73
+G C P IVT
Sbjct: 92 QLLGVCTLEPPFYIVT 107
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + P+DRP F ++ E +
Sbjct: 262 ELMRACWKWSPADRPSFAETHQAFETM 288
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 4 RIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGA 62
++ + H G ++ G W G ++ VKVL V K+ F E R H N++ +GA
Sbjct: 17 KLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKS-RDFNEECPRLRIFSHPNVLPVLGA 75
Query: 63 CMKP--PHLAIVTSKCNGHTLYTNIH 86
C P PH ++T +LY +H
Sbjct: 76 CQSPPAPHPTLITHWMPYGSLYNVLH 101
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A
2- Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A
2- Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 5 IGKGHFGTVYNGNWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGAC 63
+GKG +G V+ G+W GE VAVK+ DEK+W + E+ RHEN++ F+ +
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSS---RDEKSWFR-ETELYNTVMLRHENILGFIASD 71
Query: 64 MKPPH 68
M H
Sbjct: 72 MTSRH 76
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 4 RIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGA 62
++ + H G ++ G W G ++ VKVL V K+ F E R H N++ +GA
Sbjct: 17 KLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKS-RDFNEECPRLRIFSHPNVLPVLGA 75
Query: 63 CMKP--PHLAIVTSKCNGHTLYTNIH 86
C P PH ++T +LY +H
Sbjct: 76 CQSPPAPHPTLITHWXPYGSLYNVLH 101
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 5 IGKGHFGTVYNGNWHGEVAVKVLDVDYLD-DEKTWEAFKLEVTTFRKTRHENLVLFMGAC 63
IG G+FG + A +++ V Y++ EK E K E+ R RH N+V F
Sbjct: 27 IGAGNFGVARL--MRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVI 84
Query: 64 MKPPHLAIVTSKCNGHTLYTNI 85
+ P HLAIV +G L+ I
Sbjct: 85 LTPTHLAIVMEYASGGELFERI 106
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 5 IGKGHFGTVYNGNWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGAC 63
+GKG +G V+ G+W GE VAVK+ DEK+W + E+ RHEN++ F+ +
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSS---RDEKSWFR-ETELYNTVMLRHENILGFIASD 71
Query: 64 MKPPH 68
M H
Sbjct: 72 MTSRH 76
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 5 IGKGHFGTVYNGNWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGAC 63
+GKG +G V+ G+W GE VAVK+ DEK+W + E+ RHEN++ F+ +
Sbjct: 45 VGKGRYGEVWRGSWQGENVAVKIFSS---RDEKSWFR-ETELYNTVMLRHENILGFIASD 100
Query: 64 MKPPH 68
M H
Sbjct: 101 MTSRH 105
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 5 IGKGHFGT---VYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
IG G+FG + + + VAVK ++ EK E K E+ R RH N+V F
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIE----RGEKIDENVKREIINHRSLRHPNIVRFKE 82
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNI 85
+ P HLAIV +G L+ I
Sbjct: 83 VILTPTHLAIVMEYASGGELFERI 106
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 5 IGKGHFGT---VYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
IG G+FG + + + VAVK ++ EK E K E+ R RH N+V F
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIE----RGEKIDENVKREIINHRSLRHPNIVRFKE 82
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNI 85
+ P HLAIV +G L+ I
Sbjct: 83 VILTPTHLAIVMEYASGGELFERI 106
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 5 IGKGHFGT---VYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
IG G+FG + + + VAVK ++ EK E K E+ R RH N+V F
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIE----RGEKIDENVKREIINHRSLRHPNIVRFKE 81
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNI 85
+ P HLAIV +G L+ I
Sbjct: 82 VILTPTHLAIVMEYASGGELFERI 105
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 1 MGDRIGKGHFGTVYNGNWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
M +IGKG +G V+ G W GE VAVKV + +E +W + E+ RHEN++ F
Sbjct: 41 MVKQIGKGRYGEVWMGKWRGEKVAVKVF---FTTEEASW-FRETEIYQTVLMRHENILGF 96
Query: 60 MGACMK 65
+ A +K
Sbjct: 97 IAADIK 102
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 4 RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
++G+G FG V+ G W+G VA+K L + EAF E +K RHE LV
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 77
Query: 62 ACMKPPHLAIVTSKCNGHTL 81
+ P + IVT N +L
Sbjct: 78 VVSEEP-IYIVTEYMNKGSL 96
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLE 131
D++ +CW +P +RP F L LE
Sbjct: 243 DLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 4 RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
++G+G FG V+ G W+G VA+K L + EAF E +K RHE LV
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 77
Query: 62 ACMKPPHLAIVTSKCNGHTL 81
+ P + IVT N +L
Sbjct: 78 VVSEEP-IYIVTEYMNKGSL 96
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLE 131
D++ +CW +P +RP F L LE
Sbjct: 243 DLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 1 MGDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFK-LEVTTFRKTRHENLVL 58
+ + IGKG FG V+ G W G EVAVK+ +E++W F+ E+ RHEN++
Sbjct: 46 LQESIGKGRFGEVWRGKWRGEEVAVKIFSS---REERSW--FREAEIYQTVMLRHENILG 100
Query: 59 FMGA 62
F+ A
Sbjct: 101 FIAA 104
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 1 MGDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFK-LEVTTFRKTRHENLVL 58
+ + IGKG FG V+ G W G EVAVK+ +E++W F+ E+ RHEN++
Sbjct: 7 LQESIGKGRFGEVWRGKWRGEEVAVKIFSS---REERSW--FREAEIYQTVMLRHENILG 61
Query: 59 FMGA 62
F+ A
Sbjct: 62 FIAA 65
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 1 MGDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFK-LEVTTFRKTRHENLVL 58
+ + IGKG FG V+ G W G EVAVK+ +E++W F+ E+ RHEN++
Sbjct: 8 LQESIGKGRFGEVWRGKWRGEEVAVKIFSS---REERSW--FREAEIYQTVMLRHENILG 62
Query: 59 FMGA 62
F+ A
Sbjct: 63 FIAA 66
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 1 MGDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFK-LEVTTFRKTRHENLVL 58
+ + IGKG FG V+ G W G EVAVK+ +E++W F+ E+ RHEN++
Sbjct: 33 LQESIGKGRFGEVWRGKWRGEEVAVKIFSS---REERSW--FREAEIYQTVMLRHENILG 87
Query: 59 FMGA 62
F+ A
Sbjct: 88 FIAA 91
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 1 MGDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFK-LEVTTFRKTRHENLVL 58
+ + IGKG FG V+ G W G EVAVK+ +E++W F+ E+ RHEN++
Sbjct: 13 LQESIGKGRFGEVWRGKWRGEEVAVKIFSS---REERSW--FREAEIYQTVMLRHENILG 67
Query: 59 FMGA 62
F+ A
Sbjct: 68 FIAA 71
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 4 RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
++G+G FG V+ G W+G VA+K L + EAF E +K RHE LV
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 80
Query: 62 ACMKPPHLAIVTSKCNGHTL 81
+ P ++ G L
Sbjct: 81 VVSEEPIYIVIEYMSKGSLL 100
Score = 27.3 bits (59), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLE 131
D++ +CW P +RP F L LE
Sbjct: 246 DLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 1 MGDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFK-LEVTTFRKTRHENLVL 58
+ + IGKG FG V+ G W G EVAVK+ +E++W F+ E+ RHEN++
Sbjct: 10 LQESIGKGRFGEVWRGKWRGEEVAVKIFSS---REERSW--FREAEIYQTVMLRHENILG 64
Query: 59 FMGA 62
F+ A
Sbjct: 65 FIAA 68
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 4 RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
++G+G FG V+ G W+G VA+K L + EAF E +K RHE LV
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 80
Query: 62 ACMKPPHLAIVTSKCNGHTL 81
+ P ++ G L
Sbjct: 81 VVSEEPIYIVIEYMSKGSLL 100
Score = 27.3 bits (59), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLE 131
D++ +CW P +RP F L LE
Sbjct: 246 DLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 5 IGKGHFGT---VYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
IG G+FG + + + VAVK ++ EK K E+ R RH N+V F
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIE----RGEKIAANVKREIINHRSLRHPNIVRFKE 82
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNI 85
+ P HLAIV +G L+ I
Sbjct: 83 VILTPTHLAIVMEYASGGELFERI 106
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 5 IGKGHFGTVYNGNW----HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
IGKGHFG VY+G + + + + + + + EAF E R H N++ +
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 61 GACMKP---PHLAIVTSKCNGHTL 81
G + P PH+ ++ C+G L
Sbjct: 89 GIMLPPEGLPHV-LLPYMCHGDLL 111
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain
Bound To Ldn- 193189
Length = 305
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 5 IGKGHFGTVYNGNWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGAC 63
+GKG +G V+ G WHGE VAVK+ DE++W + E+ RH+N++ F+ +
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVKIFSS---RDEQSW-FRETEIYNTVLLRHDNILGFIASD 71
Query: 64 M 64
M
Sbjct: 72 M 72
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 4 RIGKGHFGTVYNGNWHGE--VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
+G G FG V G W G+ VAVK++ + +++ F E T K H LV F G
Sbjct: 15 ELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDE----FFQEAQTMMKLSHPKLVKFYG 70
Query: 62 ACMKPPHLAIVT 73
C K + IVT
Sbjct: 71 VCSKEYPIYIVT 82
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKLPKK 136
++ CW P RP F L+ S+E L +K
Sbjct: 237 IMYSCWHELPEKRPTFQQLLSSIEPLREK 265
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 4 RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
++G+G FG V+ G W+G VA+K L + E AF E +K RHE LV
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQLYA 70
Query: 62 ACMKPPHLAIVTS 74
+ P + IVT
Sbjct: 71 VVSEEP-IXIVTE 82
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLE 131
D++ +CW +P +RP F L LE
Sbjct: 236 DLMCQCWRKEPEERPTFEYLQAFLE 260
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 4 RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
++G+G FG V+ G W+G VA+K L + E AF E +K RHE LV
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKIRHEKLVQLYA 80
Query: 62 ACMKPPHLAIVTSKCNGHTL 81
+ P + G L
Sbjct: 81 VVSEEPIYIVTEYMSKGSLL 100
Score = 27.3 bits (59), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLE 131
D++ +CW P +RP F L LE
Sbjct: 246 DLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 4 RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
++G+G FG V+ G W+G VA+K L + E AF E +K RHE LV
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQLYA 73
Query: 62 ACMKPPHLAIVTSKCNGHTL 81
+ P + G L
Sbjct: 74 VVSEEPIYIVTEYMSKGSLL 93
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLE 131
D++ +CW +P +RP F L LE
Sbjct: 239 DLMCQCWRKEPEERPTFEYLQAFLE 263
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 4 RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
++G+G FG V+ G W+G VA+K L + E AF E +K RHE LV
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQLYA 69
Query: 62 ACMKPPHLAIVTSKCNGHTL 81
+ P + G L
Sbjct: 70 VVSEEPIYIVTEYMSKGSLL 89
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLE 131
D++ +CW P +RP F L LE
Sbjct: 235 DLMCQCWRKDPEERPTFEYLQAFLE 259
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 4 RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
++G+G FG V+ G W+G VA+K L + E AF E +K RHE LV
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQLYA 71
Query: 62 ACMKPPHLAIVTSKCNGHTL 81
+ P + G L
Sbjct: 72 VVSEEPIYIVTEYMSKGSLL 91
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLE 131
D++ +CW P +RP F L LE
Sbjct: 237 DLMCQCWRKDPEERPTFEYLQAFLE 261
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 5 IGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGAC 63
IGKG FG V G++ G +VAVK + D T +AF E + + RH NLV +G
Sbjct: 29 IGKGEFGDVMLGDYRGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 64 MKPP-HLAIVT 73
++ L IVT
Sbjct: 84 VEEKGGLYIVT 94
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 4 RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
++G+G FG V+ G W+G VA+K L + E AF E +K RHE LV
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQLYA 80
Query: 62 ACMKPPHLAIVTSKCNGHTL 81
+ P + G L
Sbjct: 81 VVSEEPIYIVTEYMSKGSLL 100
Score = 27.3 bits (59), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLE 131
D++ +CW P +RP F L LE
Sbjct: 246 DLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 4 RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
++G+G FG V+ G W+G VA+K L + E AF E +K RHE LV
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQLYA 246
Query: 62 ACMKPPHLAIVT 73
+ P + IVT
Sbjct: 247 VVSEEP-IYIVT 257
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLE 131
D++ +CW +P +RP F L LE
Sbjct: 412 DLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 4 RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
++G+G FG V+ G W+G VA+K L + E AF E +K RHE LV
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQLYA 80
Query: 62 ACMKPPHLAIVTSKCNGHTL 81
+ P + G L
Sbjct: 81 VVSEEPIYIVTEYMSKGSLL 100
Score = 27.3 bits (59), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLE 131
D++ +CW P +RP F L LE
Sbjct: 246 DLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 4 RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
++G+G FG V+ G W+G VA+K L + E AF E +K RHE LV
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQLYA 246
Query: 62 ACMKPPHLAIVT 73
+ P + IVT
Sbjct: 247 VVSEEP-IYIVT 257
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLE 131
D++ +CW +P +RP F L LE
Sbjct: 412 DLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 5 IGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGAC 63
IGKG FG V G++ G +VAVK + D T +AF E + + RH NLV +G
Sbjct: 20 IGKGEFGDVMLGDYRGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 64 MK 65
++
Sbjct: 75 VE 76
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38
(Type Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38
(Type Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37
(Type Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37
(Type Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45
(Type Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45
(Type Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 4 RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
++G+G FG V+ G W+G VA+K L + EAF E +K RHE LV
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 80
Query: 62 ACMKPPHLAIVTS 74
+ P + IVT
Sbjct: 81 VVSEEP-IYIVTE 92
Score = 27.3 bits (59), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLE 131
D++ +CW P +RP F L LE
Sbjct: 246 DLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 5 IGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGAC 63
IGKG FG V G++ G +VAVK + D T +AF E + + RH NLV +G
Sbjct: 14 IGKGEFGDVMLGDYRGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 64 MK 65
++
Sbjct: 69 VE 70
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 4 RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
++G+G FG V+ G W+G VA+K L + E AF E +K RHE LV
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQLYA 329
Query: 62 ACMKPPHLAIVT 73
+ P + IVT
Sbjct: 330 VVSEEP-IYIVT 340
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLE 131
D++ +CW +P +RP F L LE
Sbjct: 495 DLMCQCWRKEPEERPTFEYLQAFLE 519
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 4 RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
++G+G FG V+ G W+G VA+K L + EAF E +K RHE LV
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 80
Query: 62 ACMKPPHLAIVTSKCNGHTL 81
+ P + G L
Sbjct: 81 VVSEEPIYIVCEYMSKGSLL 100
Score = 27.3 bits (59), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLE 131
D++ +CW P +RP F L LE
Sbjct: 246 DLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 5 IGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGAC 63
IGKG FG V G++ G +VAVK + D T +AF E + + RH NLV +G
Sbjct: 201 IGKGEFGDVMLGDYRGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 64 MK 65
++
Sbjct: 256 VE 257
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
DV+ CW + RP F+ L + LE +
Sbjct: 417 DVMKNCWHLDAATRPTFLQLREQLEHI 443
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 4 RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
++G+G FG V+ G W+G VA+K L + E AF E +K RHE LV
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPE----AFLQEAQVMKKLRHEKLVQLYA 247
Query: 62 ACMKPPHLAIVT 73
+ P + IVT
Sbjct: 248 VVSEEP-IYIVT 258
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLE 131
D++ +CW P +RP F L LE
Sbjct: 413 DLMCQCWRKDPEERPTFEYLQAFLE 437
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 4 RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
++G+G FG V+ G W+G VA+K L + EAF E +K RHE LV
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 80
Query: 62 ACMKPPHLAIVTSKCNGHTL 81
+ P ++ G L
Sbjct: 81 VVSEEPIYIVMEYMSKGCLL 100
Score = 27.3 bits (59), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLE 131
D++ +CW P +RP F L LE
Sbjct: 246 DLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 4 RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
R+G G FG V+ G W+G +VA+K L + E+F E +K +H+ LV
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSP----ESFLEEAQIMKKLKHDKLVQLYA 71
Query: 62 ACMKPPHLAIVTSKCNGHTL 81
+ P + IVT N +L
Sbjct: 72 VVSEEP-IYIVTEYMNKGSL 90
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 1 MGDRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
+G++IG+G+FG V++G + VAVK D K F E ++ H N+V
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA--KFLQEARILKQYSHPNIV 175
Query: 58 LFMGACMKPPHLAIVTSKCNGHTLYT 83
+G C + + IV G T
Sbjct: 176 RLIGVCTQKQPIYIVMELVQGGDFLT 201
Score = 33.1 bits (74), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 20/29 (68%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKLPKK 136
++ +CW+Y+P RP F T+ + L+ + K+
Sbjct: 347 LMEQCWAYEPGQRPSFSTIYQELQSIRKR 375
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 1 MGDRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
+G++IG+G+FG V++G + VAVK D K F E ++ H N+V
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA--KFLQEARILKQYSHPNIV 175
Query: 58 LFMGACMKPPHLAIVTSKCNGHTLYT 83
+G C + + IV G T
Sbjct: 176 RLIGVCTQKQPIYIVMELVQGGDFLT 201
Score = 33.5 bits (75), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 20/29 (68%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKLPKK 136
++ +CW+Y+P RP F T+ + L+ + K+
Sbjct: 347 LMEQCWAYEPGQRPSFSTIYQELQSIRKR 375
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 4 RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
++G+G FG V+ G W+G VA+K L + EAF E +K RHE LV
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 246
Query: 62 ACMKPP 67
+ P
Sbjct: 247 VVSEEP 252
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLE 131
D++ +CW +P +RP F L LE
Sbjct: 412 DLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 5 IGKGHFGT--VYNGNWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
IG G+FG + E VAVK ++ DE + E+ R RH N+V F
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENV----QREIINHRSLRHPNIVRFKE 83
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNI 85
+ P HLAI+ +G LY I
Sbjct: 84 VILTPTHLAIIMEYASGGELYERI 107
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 6/104 (5%)
Query: 5 IGKGHFGTVYNGNWHGE--VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGA 62
+G G FG V G W G+ VA+K++ + +++ F E HE LV G
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMMNLSHEKLVQLYGV 72
Query: 63 CMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
C K + I+T L + + +F ++ + + + +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 116
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Query: 4 RIGKGHFGTVYNGNWHGE--VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
+G G FG V G W G+ VA+K++ + +++ F E HE LV G
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMMNLSHEKLVQLYG 86
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKM 97
C K + I+T L + + +F ++
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL 122
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Query: 4 RIGKGHFGTVYNGNWHGE--VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
+G G FG V G W G+ VA+K++ + +++ F E HE LV G
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMMNLSHEKLVQLYG 86
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKM 97
C K + I+T L + + +F ++
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL 122
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 6/104 (5%)
Query: 5 IGKGHFGTVYNGNWHGE--VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGA 62
+G G FG V G W G+ VA+K++ + +++ F E HE LV G
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMMNLSHEKLVQLYGV 71
Query: 63 CMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
C K + I+T L + + +F ++ + + + +
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 115
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 6/104 (5%)
Query: 5 IGKGHFGTVYNGNWHGE--VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGA 62
+G G FG V G W G+ VA+K++ + +++ F E HE LV G
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMMNLSHEKLVQLYGV 67
Query: 63 CMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
C K + I+T L + + +F ++ + + + +
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 111
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 2 GDRIGKGHFGTVYNGNWHG-EVAVKVLD--VDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
G+++G+G FG VY G + VAVK L VD + E+ + F E+ K +HENLV
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVD-ITTEELKQQFDQEIKVMAKCQHENLVE 94
Query: 59 FMGACMKPPHLAIV 72
+G L +V
Sbjct: 95 LLGFSSDGDDLCLV 108
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 6/104 (5%)
Query: 5 IGKGHFGTVYNGNWHGE--VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGA 62
+G G FG V G W G+ VA+K++ + +++ F E HE LV G
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMMNLSHEKLVQLYGV 72
Query: 63 CMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
C K + I+T L + + +F ++ + + + +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 116
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 2 GDRIGKGHFGTVYNGNWHG-EVAVKVLD--VDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
G+++G+G FG VY G + VAVK L VD + E+ + F E+ K +HENLV
Sbjct: 30 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVD-ITTEELKQQFDQEIKVMAKCQHENLVE 88
Query: 59 FMGACMKPPHLAIV 72
+G L +V
Sbjct: 89 LLGFSSDGDDLCLV 102
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 2 GDRIGKGHFGTVYNGNWHG-EVAVKVLD--VDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
G+++G+G FG VY G + VAVK L VD + E+ + F E+ K +HENLV
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVD-ITTEELKQQFDQEIKVMAKCQHENLVE 94
Query: 59 FMGACMKPPHLAIV 72
+G L +V
Sbjct: 95 LLGFSSDGDDLCLV 108
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
Query: 4 RIGKGHFGTVYNGNWHGE--VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
+G G FG V G W G+ VA+K++ + +++ F E HE LV G
Sbjct: 22 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMMNLSHEKLVQLYG 77
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
C K + I+T L + + +F ++ + + + +
Sbjct: 78 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 122
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 3 DRIGKGHFGTVYNG--NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+R+G G FG V+ G N H +VAVK L + +AF E ++ +H+ LV
Sbjct: 28 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLY 83
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
+ P I NG + K +NK+ + QI++
Sbjct: 84 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 129
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 3 DRIGKGHFGTVYNG--NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+R+G G FG V+ G N H +VAVK L + +AF E ++ +H+ LV
Sbjct: 27 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLY 82
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
+ P I NG + K +NK+ + QI++
Sbjct: 83 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 128
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 3 DRIGKGHFGTVYNG--NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+R+G G FG V+ G N H +VAVK L + +AF E ++ +H+ LV
Sbjct: 21 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLY 76
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
+ P I NG + K +NK+ + QI++
Sbjct: 77 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 122
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 3 DRIGKGHFGTVYNG--NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+R+G G FG V+ G N H +VAVK L + +AF E ++ +H+ LV
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLY 80
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
+ P I NG + K +NK+ + QI++
Sbjct: 81 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 126
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 3 DRIGKGHFGTVYNG--NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+R+G G FG V+ G N H +VAVK L + +AF E ++ +H+ LV
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLY 74
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
+ P I NG + K +NK+ + QI++
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 3 DRIGKGHFGTVYNG--NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+R+G G FG V+ G N H +VAVK L + +AF E ++ +H+ LV
Sbjct: 29 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLY 84
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
+ P I NG + K +NK+ + QI++
Sbjct: 85 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 130
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 3 DRIGKGHFGTVYNG--NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+R+G G FG V+ G N H +VAVK L + +AF E ++ +H+ LV
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLY 80
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
+ P I NG + K +NK+ + QI++
Sbjct: 81 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 126
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHGE------VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE 54
+G +G+G FG+V GN E VAVK + +D ++ E F E + H
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDN-SSQREIEEFLSEAACMKDFSHP 96
Query: 55 NLVLFMGACMK 65
N++ +G C++
Sbjct: 97 NVIRLLGVCIE 107
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW P DRP F L LEKL
Sbjct: 280 EIMYSCWRTDPLDRPTFSVLRLQLEKL 306
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 3 DRIGKGHFGTVYNG--NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+R+G G FG V+ G N H +VAVK L + +AF E ++ +H+ LV
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLY 74
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
+ P I NG + K +NK+ + QI++
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 3 DRIGKGHFGTVYNG--NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+R+G G FG V+ G N H +VAVK L + +AF E ++ +H+ LV
Sbjct: 20 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLY 75
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
+ P I NG + K +NK+ + QI++
Sbjct: 76 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 121
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 3 DRIGKGHFGTVYNG--NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+R+G G FG V+ G N H +VAVK L + +AF E ++ +H+ LV
Sbjct: 24 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLY 79
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
+ P I NG + K +NK+ + QI++
Sbjct: 80 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 125
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 3 DRIGKGHFGTVYNG--NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+R+G G FG V+ G N H +VAVK L + +AF E ++ +H+ LV
Sbjct: 15 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLY 70
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
+ P I NG + K +NK+ + QI++
Sbjct: 71 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 116
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 3 DRIGKGHFGTVYNG--NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+R+G G FG V+ G N H +VAVK L + +AF E ++ +H+ LV
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLY 74
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
+ P I NG + K +NK+ + QI++
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 3 DRIGKGHFGTVYNG--NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+R+G G FG V+ G N H +VAVK L + +AF E ++ +H+ LV
Sbjct: 14 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLY 69
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
+ P I NG + K +NK+ + QI++
Sbjct: 70 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 115
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 42/104 (40%)
Query: 2 GDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
G+ +GKG FG V V+ DE+T F EV R H N++ F+G
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQIS 105
K L +T G TL I ++ ++ + + I+
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIA 118
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 10/112 (8%)
Query: 5 IGKGHFGTVYNGNW--HGE-----VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
+G G FGTVY G W GE VA+K+L + K F E H +LV
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKIL--NETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 58 LFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVL 109
+G C+ P + +VT L +H +K+ + QI++ ++
Sbjct: 104 RLLGVCLS-PTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMM 154
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
G +G G FG V N +G +VAVK+L E+ +L++ T +
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMT-QLGS 107
Query: 53 HENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQ 103
HEN+V +GAC + ++ C L + +EKF+ +++ Q+
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQK 158
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 10/112 (8%)
Query: 5 IGKGHFGTVYNGNW--HGE-----VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
+G G FGTVY G W GE VA+K+L + K F E H +LV
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKIL--NETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 58 LFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVL 109
+G C+ P + +VT L +H +K+ + QI++ ++
Sbjct: 81 RLLGVCLS-PTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMM 131
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 2 GDRIGKGHFGTVYNGNWHGE-VAVKVLD--VDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
G++ G+G FG VY G + VAVK L VD + E+ + F E+ K +HENLV
Sbjct: 27 GNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVD-ITTEELKQQFDQEIKVXAKCQHENLVE 85
Query: 59 FMGACMKPPHLAIV 72
+G L +V
Sbjct: 86 LLGFSSDGDDLCLV 99
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 17/153 (11%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
+G +G+G FG V + G VAVK+L E +L++
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL-IHIGH 80
Query: 53 HENLVLFMGACMKPPH-LAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVL-- 109
H N+V +GAC KP L ++T C L T + + +F K++ + + +D L
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAP--EDLYKDFLTL 138
Query: 110 --MKCWSYKPSDRPDFITLMKSLEK-LPKKRIL 139
+ C+S++ + +F+ K + + L + IL
Sbjct: 139 EHLICYSFQVAKGMEFLASRKCIHRDLAARNIL 171
Score = 26.2 bits (56), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 109 LMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW +PS RP F L++ L L
Sbjct: 275 MLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 17/153 (11%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
+G +G+G FG V + G VAVK+L E +L++
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL-IHIGH 80
Query: 53 HENLVLFMGACMKPPH-LAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVL-- 109
H N+V +GAC KP L ++T C L T + + +F K++ + + +D L
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAP--EDLYKDFLTL 138
Query: 110 --MKCWSYKPSDRPDFITLMKSLEK-LPKKRIL 139
+ C+S++ + +F+ K + + L + IL
Sbjct: 139 EHLICYSFQVAKGMEFLASRKCIHRDLAARNIL 171
Score = 26.2 bits (56), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 109 LMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW +PS RP F L++ L L
Sbjct: 275 MLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 17/153 (11%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
+G +G+G FG V + G VAVK+L E +L++
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL-IHIGH 80
Query: 53 HENLVLFMGACMKPPH-LAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVL-- 109
H N+V +GAC KP L ++T C L T + + +F K++ + + +D L
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAP--EDLYKDFLTL 138
Query: 110 --MKCWSYKPSDRPDFITLMKSLEK-LPKKRIL 139
+ C+S++ + +F+ K + + L + IL
Sbjct: 139 EHLICYSFQVAKGMEFLASRKCIHRDLAARNIL 171
Score = 26.2 bits (56), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 109 LMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW +PS RP F L++ L L
Sbjct: 275 MLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 5 IGKGHFGTVYNGNW--HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGA 62
IG G FG V+ G W +VA+K + + +E F E K H LV G
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----FIEEAEVMMKLSHPKLVQLYGV 71
Query: 63 CMKPPHLAIVT 73
C++ + +VT
Sbjct: 72 CLEQAPICLVT 82
Score = 29.6 bits (65), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 83 TNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK 135
T +YK + A ST QI + CW +P DRP F L++ L ++ +
Sbjct: 220 TGFRLYKPRLA----STHVYQI----MNHCWRERPEDRPAFSRLLRQLAEIAE 264
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
G +G G FG V G +VAVK+L DEK +L++ + +
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS-HLGQ 108
Query: 53 HENLVLFMGACMKPPHLAIVTSKC 76
HEN+V +GAC + ++T C
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYC 132
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
G +G G FG V G +VAVK+L DEK +L++ + +
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS-HLGQ 108
Query: 53 HENLVLFMGACMKPPHLAIVTSKC 76
HEN+V +GAC + ++T C
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYC 132
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
G +G G FG V G +VAVK+L DEK +L++ + +
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS-HLGQ 108
Query: 53 HENLVLFMGACMKPPHLAIVTSKC 76
HEN+V +GAC + ++T C
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYC 132
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Query: 1 MGDRIGKGHFGTVYNGNW----HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+G IG+G FG V+ G + + +AV + + E F E T R+ H ++
Sbjct: 11 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 70
Query: 57 VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQIS 105
V +G + P + I+ C L + + + K L + Q+S
Sbjct: 71 VKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 118
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
++ KCW+Y PS RP F L L +
Sbjct: 241 LMTKCWAYDPSRRPRFTELKAQLSTI 266
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Query: 1 MGDRIGKGHFGTVYNGNW----HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+G IG+G FG V+ G + + +AV + + E F E T R+ H ++
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 57 VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQIS 105
V +G + P + I+ C L + + + K L + Q+S
Sbjct: 74 VKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 121
Score = 30.0 bits (66), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
++ KCW+Y PS RP F L L +
Sbjct: 244 LMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
G +G G FG V G +VAVK+L DEK +L++ + +
Sbjct: 42 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS-HLGQ 100
Query: 53 HENLVLFMGACMKPPHLAIVTSKC 76
HEN+V +GAC + ++T C
Sbjct: 101 HENIVNLLGACTHGGPVLVITEYC 124
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
G +G G FG V G +VAVK+L DEK +L++ + +
Sbjct: 35 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS-HLGQ 93
Query: 53 HENLVLFMGACMKPPHLAIVTSKC 76
HEN+V +GAC + ++T C
Sbjct: 94 HENIVNLLGACTHGGPVLVITEYC 117
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Query: 1 MGDRIGKGHFGTVYNGNW----HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+G IG+G FG V+ G + + +AV + + E F E T R+ H ++
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 57 VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQIS 105
V +G + P + I+ C L + + + K L + Q+S
Sbjct: 74 VKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 121
Score = 30.0 bits (66), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
++ KCW+Y PS RP F L L +
Sbjct: 244 LMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Query: 1 MGDRIGKGHFGTVYNGNW----HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+G IG+G FG V+ G + + +AV + + E F E T R+ H ++
Sbjct: 42 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 101
Query: 57 VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQIS 105
V +G + P + I+ C L + + + K L + Q+S
Sbjct: 102 VKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 149
Score = 30.4 bits (67), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
++ KCW+Y PS RP F L L +
Sbjct: 272 LMTKCWAYDPSRRPRFTELKAQLSTI 297
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Query: 1 MGDRIGKGHFGTVYNGNW----HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+G IG+G FG V+ G + + +AV + + E F E T R+ H ++
Sbjct: 19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 78
Query: 57 VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQIS 105
V +G + P + I+ C L + + + K L + Q+S
Sbjct: 79 VKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 126
Score = 30.4 bits (67), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
++ KCW+Y PS RP F L L +
Sbjct: 249 LMTKCWAYDPSRRPRFTELKAQLSTI 274
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
G +G G FG V G +VAVK+L DEK +L++ + +
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS-HLGQ 108
Query: 53 HENLVLFMGACMKPPHLAIVTSKC 76
HEN+V +GAC + ++T C
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYC 132
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Query: 1 MGDRIGKGHFGTVYNGNW----HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+G IG+G FG V+ G + + +AV + + E F E T R+ H ++
Sbjct: 16 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 75
Query: 57 VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQIS 105
V +G + P + I+ C L + + + K L + Q+S
Sbjct: 76 VKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 123
Score = 30.4 bits (67), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
++ KCW+Y PS RP F L L +
Sbjct: 246 LMTKCWAYDPSRRPRFTELKAQLSTI 271
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 17/153 (11%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
+G +G+G FG V + G VAVK+L E +L++
Sbjct: 22 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL-IHIGH 80
Query: 53 HENLVLFMGACMKPPH-LAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVL-- 109
H N+V +GAC KP L ++ C L T + + +F K++ + + +D L
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP--EDLYKDFLTL 138
Query: 110 --MKCWSYKPSDRPDFITLMKSLEK-LPKKRIL 139
+ C+S++ + +F+ K + + L + IL
Sbjct: 139 EHLICYSFQVAKGMEFLASRKCIHRDLAARNIL 171
Score = 26.2 bits (56), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 109 LMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW +PS RP F L++ L L
Sbjct: 275 MLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 17/153 (11%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
+G +G+G FG V + G VAVK+L E +L++
Sbjct: 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL-IHIGH 126
Query: 53 HENLVLFMGACMKPPH-LAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVL-- 109
H N+V +GAC KP L ++ C L T + + +F K++ + + +D L
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP--EDLYKDFLTL 184
Query: 110 --MKCWSYKPSDRPDFITLMKSLEK-LPKKRIL 139
+ C+S++ + +F+ K + + L + IL
Sbjct: 185 EHLICYSFQVAKGMEFLASRKCIHRDLAARNIL 217
Score = 26.2 bits (56), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 109 LMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW +PS RP F L++ L L
Sbjct: 321 MLDCWHGEPSQRPTFSELVEHLGNL 345
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Query: 1 MGDRIGKGHFGTVYNGNW----HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+G IG+G FG V+ G + + +AV + + E F E T R+ H ++
Sbjct: 17 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 76
Query: 57 VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQIS 105
V +G + P + I+ C L + + + K L + Q+S
Sbjct: 77 VKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 124
Score = 30.4 bits (67), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
++ KCW+Y PS RP F L L +
Sbjct: 247 LMTKCWAYDPSRRPRFTELKAQLSTI 272
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 3 DRIGKGHFGTVYNG-NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
DRIGKG FG VY G + H + V + +D + E E + E+T + + + G
Sbjct: 25 DRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 62 ACMKPPHLAIVTSKCNG 78
+ +K L I+ G
Sbjct: 85 SYLKSTKLWIIMEYLGG 101
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Query: 1 MGDRIGKGHFGTVYNGNW----HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+G IG+G FG V+ G + + +AV + + E F E T R+ H ++
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 57 VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQIS 105
V +G + P + I+ C L + + + K L + Q+S
Sbjct: 74 VKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLS 121
Score = 30.0 bits (66), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
++ KCW+Y PS RP F L L +
Sbjct: 244 LMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 17/153 (11%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
+G +G+G FG V + G VAVK+L E +L++
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL-IHIGH 89
Query: 53 HENLVLFMGACMKPPH-LAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVL-- 109
H N+V +GAC KP L ++ C L T + + +F K++ + + +D L
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP--EDLYKDFLTL 147
Query: 110 --MKCWSYKPSDRPDFITLMKSLEK-LPKKRIL 139
+ C+S++ + +F+ K + + L + IL
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNIL 180
Score = 26.2 bits (56), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 109 LMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW +PS RP F L++ L L
Sbjct: 284 MLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Query: 1 MGDRIGKGHFGTVYNGNW----HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+G IG+G FG V+ G + + +AV + + E F E T R+ H ++
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 57 VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQIS 105
V +G + P + I+ C L + + + K L + Q+S
Sbjct: 74 VKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLS 121
Score = 30.0 bits (66), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
++ KCW+Y PS RP F L L +
Sbjct: 244 LMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 17/153 (11%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
+G +G+G FG V + G VAVK+L E +L++
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL-IHIGH 89
Query: 53 HENLVLFMGACMKPPH-LAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVL-- 109
H N+V +GAC KP L ++ C L T + + +F K++ + + +D L
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP--EDLYKDFLTL 147
Query: 110 --MKCWSYKPSDRPDFITLMKSLEK-LPKKRIL 139
+ C+S++ + +F+ K + + L + IL
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNIL 180
Score = 26.2 bits (56), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 109 LMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW +PS RP F L++ L L
Sbjct: 284 MLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 34.3 bits (77), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 5 IGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEA---FKLEVTTFRKTRHENLVLFMG 61
+G+G FG VY G V V L +E+T F+ EV H NL+ G
Sbjct: 38 LGRGGFGKVYKGRLADGXLVAV---KRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG 94
Query: 62 ACMKPPHLAIV 72
CM P +V
Sbjct: 95 FCMTPTERLLV 105
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 34.3 bits (77), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 17/153 (11%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
+G +G+G FG V + G VAVK+L E +L++
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL-IHIGH 89
Query: 53 HENLVLFMGACMKPPH-LAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVL-- 109
H N+V +GAC KP L ++ C L T + + +F K++ + + +D L
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP--EDLYKDFLTL 147
Query: 110 --MKCWSYKPSDRPDFITLMKSLEK-LPKKRIL 139
+ C+S++ + +F+ K + + L + IL
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNIL 180
Score = 26.2 bits (56), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 109 LMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW +PS RP F L++ L L
Sbjct: 284 MLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 44/110 (40%), Gaps = 9/110 (8%)
Query: 4 RIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDE----KTWEAFKLEVTTFRKTRHENL 56
+IGKG FG V+ G + VA+K L + + E + ++ F+ EV H N+
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 57 VLFMGACMKPPHLAIVTSKCNG--HTLYTNIHIYKEKFALNKMSTVGQQI 104
V G PP + + C H L H K L M + I
Sbjct: 86 VKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 106 QDVLMKCWSYKPSDRPDFITLMKSLEKL 133
++V+ CWS P RP F ++K L +L
Sbjct: 260 RNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 44/110 (40%), Gaps = 9/110 (8%)
Query: 4 RIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDE----KTWEAFKLEVTTFRKTRHENL 56
+IGKG FG V+ G + VA+K L + + E + ++ F+ EV H N+
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 57 VLFMGACMKPPHLAIVTSKCNG--HTLYTNIHIYKEKFALNKMSTVGQQI 104
V G PP + + C H L H K L M + I
Sbjct: 86 VKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 106 QDVLMKCWSYKPSDRPDFITLMKSLEKL 133
++V+ CWS P RP F ++K L +L
Sbjct: 260 RNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 34.3 bits (77), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 44/110 (40%), Gaps = 9/110 (8%)
Query: 4 RIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDE----KTWEAFKLEVTTFRKTRHENL 56
+IGKG FG V+ G + VA+K L + + E + ++ F+ EV H N+
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 57 VLFMGACMKPPHLAIVTSKCNG--HTLYTNIHIYKEKFALNKMSTVGQQI 104
V G PP + + C H L H K L M + I
Sbjct: 86 VKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 106 QDVLMKCWSYKPSDRPDFITLMKSLEKL 133
++V+ CWS P RP F ++K L +L
Sbjct: 260 RNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 33.9 bits (76), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Query: 1 MGDRIGKGHFGTVYNGNW----HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+G IG+G FG V+ G + + +AV + + E F E T R+ H ++
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 453
Query: 57 VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQIS 105
V +G + P + I+ C L + + + K L + Q+S
Sbjct: 454 VKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLS 501
Score = 30.4 bits (67), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
++ KCW+Y PS RP F L L +
Sbjct: 624 LMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 33.9 bits (76), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Query: 1 MGDRIGKGHFGTVYNGNW----HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+G IG+G FG V+ G + + +AV + + E F E T R+ H ++
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 453
Query: 57 VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQIS 105
V +G + P + I+ C L + + + K L + Q+S
Sbjct: 454 VKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLS 501
Score = 30.4 bits (67), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
++ KCW+Y PS RP F L L +
Sbjct: 624 LMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 33.5 bits (75), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 27/68 (39%)
Query: 5 IGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACM 64
+G+G FG VY G V V + + F+ EV H NL+ G CM
Sbjct: 46 LGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCM 105
Query: 65 KPPHLAIV 72
P +V
Sbjct: 106 TPTERLLV 113
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 33.5 bits (75), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 5 IGKGHFGTVYNG----NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
IG+GHFG VY+G N ++ V ++ + D F E + H N++ +
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 61 GACMK 65
G C++
Sbjct: 157 GICLR 161
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 33.5 bits (75), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 5 IGKGHFGTVYNG----NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
IG+GHFG VY+G N ++ V ++ + D F E + H N++ +
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 61 GACMK 65
G C++
Sbjct: 117 GICLR 121
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 33.5 bits (75), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 4 RIGKGHFGTVYNGNW--HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
IG G FG V+ G W +VA+K + + +E F E K H LV G
Sbjct: 14 EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----FIEEAEVMMKLSHPKLVQLYG 69
Query: 62 ACMKPPHLAIV 72
C++ + +V
Sbjct: 70 VCLEQAPICLV 80
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 8/51 (15%)
Query: 83 TNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKL 133
T +YK + A ST QI + CW +P DRP F L++ L +
Sbjct: 219 TGFRLYKPRLA----STHVYQI----MNHCWKERPEDRPAFSRLLRQLAAI 261
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 33.5 bits (75), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 5 IGKGHFGTVYNG----NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
IG+GHFG VY+G N ++ V ++ + D F E + H N++ +
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 61 GACMK 65
G C++
Sbjct: 116 GICLR 120
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 33.5 bits (75), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 4 RIGKGHFGTVYNGNW--HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
IG G FG V+ G W +VA+K + + +E F E K H LV G
Sbjct: 12 EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----FIEEAEVMMKLSHPKLVQLYG 67
Query: 62 ACMKPPHLAIV 72
C++ + +V
Sbjct: 68 VCLEQAPICLV 78
Score = 29.6 bits (65), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 83 TNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK 135
T +YK + A ST QI + CW +P DRP F L++ L ++ +
Sbjct: 217 TGFRLYKPRLA----STHVYQI----MNHCWKERPEDRPAFSRLLRQLAEIAE 261
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell
Kinase Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 33.5 bits (75), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 4 RIGKGHFGTVYNGNW--HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
IG G FG V+ G W +VA+K + + +E F E K H LV G
Sbjct: 14 EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----FIEEAEVMMKLSHPKLVQLYG 69
Query: 62 ACMKPPHLAIV 72
C++ + +V
Sbjct: 70 VCLEQAPICLV 80
Score = 29.6 bits (65), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 83 TNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK 135
T +YK + A ST QI + CW +P DRP F L++ L ++ +
Sbjct: 219 TGFRLYKPRLA----STHVYQI----MNHCWKERPEDRPAFSRLLRQLAEIAE 263
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 33.5 bits (75), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 5 IGKGHFGTVYNGNW--HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGA 62
IG G FG V+ G W +VA+K + + +E F E K H LV G
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----FIEEAEVMMKLSHPKLVQLYGV 73
Query: 63 CMKPPHLAIV 72
C++ + +V
Sbjct: 74 CLEQAPICLV 83
Score = 29.6 bits (65), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 83 TNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK 135
T +YK + A ST QI + CW +P DRP F L++ L ++ +
Sbjct: 222 TGFRLYKPRLA----STHVYQI----MNHCWRERPEDRPAFSRLLRQLAEIAE 266
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 33.5 bits (75), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 17/153 (11%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
+G +G+G FG V + G VAVK+L E +L++
Sbjct: 33 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL-IHIGH 91
Query: 53 HENLVLFMGACMKPPH-LAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVL-- 109
H N+V +GAC KP L ++ C L T + + +F K + + + +D L
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAP--EDLYKDFLTL 149
Query: 110 --MKCWSYKPSDRPDFITLMKSLEK-LPKKRIL 139
+ C+S++ + +F+ K + + L + IL
Sbjct: 150 EHLICYSFQVAKGMEFLASRKCIHRDLAARNIL 182
Score = 26.2 bits (56), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 109 LMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW +PS RP F L++ L L
Sbjct: 286 MLDCWHGEPSQRPTFSELVEHLGNL 310
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 33.5 bits (75), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 5 IGKGHFGTVYNG----NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
IG+GHFG VY+G N ++ V ++ + D F E + H N++ +
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 61 GACMK 65
G C++
Sbjct: 97 GICLR 101
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 33.5 bits (75), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 5 IGKGHFGTVYNG----NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
IG+GHFG VY+G N ++ V ++ + D F E + H N++ +
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 61 GACMK 65
G C++
Sbjct: 90 GICLR 94
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase
Domain Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase
Domain Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase
Domain Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 33.5 bits (75), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 5 IGKGHFGTVYNG----NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
IG+GHFG VY+G N ++ V ++ + D F E + H N++ +
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 61 GACMK 65
G C++
Sbjct: 95 GICLR 99
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 33.1 bits (74), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 5 IGKGHFGTVYNG----NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
IG+GHFG VY+G N ++ V ++ + D F E + H N++ +
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 61 GACMK 65
G C++
Sbjct: 98 GICLR 102
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKR 137
D++ +CW KP +RP F ++ SL ++ ++R
Sbjct: 269 DLMRQCWREKPYERPSFAQILVSLNRMLEER 299
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 5 IGKGHFGTVYNG----NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
IG+GHFG VY+G N ++ V ++ + D F E + H N++ +
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 61 GACMK 65
G C++
Sbjct: 93 GICLR 97
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 5 IGKGHFGTVYNG----NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
IG+GHFG VY+G N ++ V ++ + D F E + H N++ +
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 61 GACMK 65
G C++
Sbjct: 103 GICLR 107
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 33.1 bits (74), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 5 IGKGHFGTVYNG----NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
IG+GHFG VY+G N ++ V ++ + D F E + H N++ +
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 61 GACMK 65
G C++
Sbjct: 98 GICLR 102
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 33.1 bits (74), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 5 IGKGHFGTVYNG----NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
IG+GHFG VY+G N ++ V ++ + D F E + H N++ +
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 61 GACMK 65
G C++
Sbjct: 96 GICLR 100
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 33.1 bits (74), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 5 IGKGHFGTVYNG----NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
IG+GHFG VY+G N ++ V ++ + D F E + H N++ +
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 61 GACMK 65
G C++
Sbjct: 97 GICLR 101
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 5 IGKGHFGTVYNG----NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
IG+GHFG VY+G N ++ V ++ + D F E + H N++ +
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 61 GACMK 65
G C++
Sbjct: 99 GICLR 103
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 33.1 bits (74), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 5 IGKGHFGTVYNG----NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
IG+GHFG VY+G N ++ V ++ + D F E + H N++ +
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 61 GACMK 65
G C++
Sbjct: 99 GICLR 103
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 33.1 bits (74), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKR 137
D++ +CW KP +RP F ++ SL ++ ++R
Sbjct: 262 DLMRQCWREKPYERPSFAQILVSLNRMLEER 292
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 33.1 bits (74), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKR 137
D++ +CW KP +RP F ++ SL ++ ++R
Sbjct: 272 DLMRQCWREKPYERPSFAQILVSLNRMLEER 302
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 33.1 bits (74), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 5 IGKGHFGTVYNG----NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
IG+GHFG VY+G N ++ V ++ + D F E + H N++ +
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 61 GACMK 65
G C++
Sbjct: 98 GICLR 102
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 33.1 bits (74), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 5 IGKGHFGTVYNG----NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
IG+GHFG VY+G N ++ V ++ + D F E + H N++ +
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 61 GACMK 65
G C++
Sbjct: 96 GICLR 100
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 33.1 bits (74), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 5 IGKGHFGTVYNG----NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
IG+GHFG VY+G N ++ V ++ + D F E + H N++ +
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 61 GACMK 65
G C++
Sbjct: 98 GICLR 102
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 33.1 bits (74), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 6 GKGHFGTVYNGNWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGA 62
+G FG V+ E VAVK+ + D+++W+ + EV + +HEN++ F+GA
Sbjct: 33 ARGRFGCVWKAQLLNEYVAVKIFPIQ---DKQSWQN-EYEVYSLPGMKHENILQFIGA 86
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 33.1 bits (74), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSL 130
++ +CW Y PSDRP F L+ SL
Sbjct: 246 LMTRCWDYDPSDRPRFTELVCSL 268
Score = 30.4 bits (67), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 5 IGKGHFGTVYNG---NWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
+G+G FG VY G N GE VAVK D D K E F E + H ++V
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHPHIVK 77
Query: 59 FMGACMKPPHLAIV 72
+G + P I+
Sbjct: 78 LIGIIEEEPTWIIM 91
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 32.7 bits (73), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSL 130
++ +CW Y PSDRP F L+ SL
Sbjct: 258 LMTRCWDYDPSDRPRFTELVCSL 280
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 5 IGKGHFGTVYNG---NWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
+G+G FG VY G N GE VAVK D D K E F E + H ++V
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHPHIVK 89
Query: 59 FMGACMKPPHLAIV 72
+G + P I+
Sbjct: 90 LIGIIEEEPTWIIM 103
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 32.7 bits (73), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 18/153 (11%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
+G +G+G FG V + G VAVK+L E +L++
Sbjct: 32 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL-IHIGH 90
Query: 53 HENLVLFMGACMKPPH-LAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVL-- 109
H N+V +GAC KP L ++ C L T + + +F K + + +D L
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTP---EDLYKDFLTL 147
Query: 110 --MKCWSYKPSDRPDFITLMKSLEK-LPKKRIL 139
+ C+S++ + +F+ K + + L + IL
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNIL 180
Score = 26.2 bits (56), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 109 LMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW +PS RP F L++ L L
Sbjct: 284 MLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 32.7 bits (73), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSL 130
++ +CW Y PSDRP F L+ SL
Sbjct: 242 LMTRCWDYDPSDRPRFTELVCSL 264
Score = 30.4 bits (67), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 5 IGKGHFGTVYNG---NWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
+G+G FG VY G N GE VAVK D D K E F E + H ++V
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHPHIVK 73
Query: 59 FMGACMKPPHLAIV 72
+G + P I+
Sbjct: 74 LIGIIEEEPTWIIM 87
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 32.7 bits (73), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Query: 78 GHTLYT---NIHIYKEKFALNKMSTVGQQISQ--DVLMKCWSYKPSDRPDFITLMKSLEK 132
G T Y N IY N++ + + + D++ +CWS P RP F L LE
Sbjct: 236 GQTPYAGIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELEN 295
Query: 133 LPKKRILARSPSHPL--NLSRS 152
+ + + PL N+ R+
Sbjct: 296 ILGHLSVLSTSQDPLYINIERA 317
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHGE------VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE 54
+G +GKG FG+V E VAVK+L D + E F E ++ H
Sbjct: 27 LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDI-EEFLREAACMKEFDHP 85
Query: 55 NLVLFMGACMK 65
++ +G ++
Sbjct: 86 HVAKLVGVSLR 96
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 32.7 bits (73), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 3 DRIGKGHFGTVY---NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
++IG+G +GTV+ N H VA+K + +D DDE + E+ ++ +H+N+V
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKELKHKNIVRL 66
Query: 60 MGACMKPPHLAIVTSKCN 77
L +V C+
Sbjct: 67 HDVLHSDKKLTLVFEFCD 84
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 32.7 bits (73), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 3 DRIGKGHFGTVY---NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
++IG+G +GTV+ N H VA+K + +D DDE + E+ ++ +H+N+V
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKELKHKNIVRL 66
Query: 60 MGACMKPPHLAIVTSKCN 77
L +V C+
Sbjct: 67 HDVLHSDKKLTLVFEFCD 84
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 32.7 bits (73), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 10/69 (14%)
Query: 5 IGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+G G FG VY G G +VAVK L Y + ++ F +E K H+N+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDEL--DFLMEALIISKFNHQNI 110
Query: 57 VLFMGACMK 65
V +G ++
Sbjct: 111 VRCIGVSLQ 119
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 8/24 (33%), Positives = 18/24 (75%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLE 131
++ +CW ++P DRP+F +++ +E
Sbjct: 292 IMTQCWQHQPEDRPNFAIILERIE 315
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 2 GDRI--GKGHFGTVYNG-NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
GDR+ GKG +G VY G + +V + + ++ D + + E+ + +H+N+V
Sbjct: 25 GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS-QPLHEEIALHKHLKHKNIVQ 83
Query: 59 FMGACMKPPHLAIVTSKCNGHTL 81
++G+ + + I + G +L
Sbjct: 84 YLGSFSENGFIKIFMEQVPGGSL 106
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Query: 3 DRIGKGHFGTVYNGNWHGEVA---VKVLDVDYLDDEKTW---EAFKLEVTTFRKTRHENL 56
+ +G+ FG VY G+ G + + + L D+ E F+ E + +H N+
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 57 VLFMGACMKPPHLAIVTSKCNGHTLY 82
V +G K L+++ S C+ L+
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLH 117
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 2 GDRI--GKGHFGTVYNG-NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
GDR+ GKG +G VY G + +V + + ++ D + + E+ + +H+N+V
Sbjct: 11 GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS-QPLHEEIALHKHLKHKNIVQ 69
Query: 59 FMGACMKPPHLAIVTSKCNGHTL 81
++G+ + + I + G +L
Sbjct: 70 YLGSFSENGFIKIFMEQVPGGSL 92
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 4 RIGKGHFGTVYNGNW--HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
IG G FG V+ G W +VA+K + + ++ F E K H LV G
Sbjct: 34 EIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDD----FIEEAEVMMKLSHPKLVQLYG 89
Query: 62 ACMKPPHLAIV 72
C++ + +V
Sbjct: 90 VCLEQAPICLV 100
Score = 29.6 bits (65), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 83 TNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK 135
T +YK + A ST QI + CW +P DRP F L++ L ++ +
Sbjct: 239 TGFRLYKPRLA----STHVYQI----MNHCWKERPEDRPAFSRLLRQLAEIAE 283
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
Query: 4 RIGKGHFGTVYNG--NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
++G G FG V+ N H +VAVK + + + EAF E + +H+ LV
Sbjct: 189 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLHA 244
Query: 62 ACMKPPHLAIVTSKCNGHTL 81
K P I G L
Sbjct: 245 VVTKEPIYIITEFMAKGSLL 264
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLE 131
+++M+CW +P +RP F + L+
Sbjct: 400 NIMMRCWKNRPEERPTFEYIQSVLD 424
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 8/24 (33%), Positives = 18/24 (75%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLE 131
++ +CW ++P DRP+F +++ +E
Sbjct: 304 IMTQCWQHQPEDRPNFAIILERIE 327
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 20/74 (27%)
Query: 5 IGKGHFGTVYNGNWHG--------EVAVKVL-----DVDYLDDEKTWEAFKLEVTTFRKT 51
+G G FG VY G G +VAVK L + D LD F +E K
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-------FLMEALIISKF 117
Query: 52 RHENLVLFMGACMK 65
H+N+V +G ++
Sbjct: 118 NHQNIVRCIGVSLQ 131
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Query: 3 DRIGKGHFGTVYNGNWHGEVA---VKVLDVDYLDDEKTW---EAFKLEVTTFRKTRHENL 56
+ +G+ FG VY G+ G + + + L D+ E F+ E + +H N+
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 57 VLFMGACMKPPHLAIVTSKCNGHTLY 82
V +G K L+++ S C+ L+
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLH 100
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
Query: 4 RIGKGHFGTVYNG--NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
++G G FG V+ N H +VAVK + + + EAF E + +H+ LV
Sbjct: 22 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLHA 77
Query: 62 ACMKPPHLAIVTSKCNGHTL 81
K P I G L
Sbjct: 78 VVTKEPIYIITEFMAKGSLL 97
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 107 DVLMKCWSYKPSDRPDF 123
+++M+CW +P +RP F
Sbjct: 243 NIMMRCWKNRPEERPTF 259
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
Query: 4 RIGKGHFGTVYNG--NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
++G G FG V+ N H +VAVK + + + EAF E + +H+ LV
Sbjct: 195 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLHA 250
Query: 62 ACMKPPHLAIVTSKCNGHTL 81
K P I G L
Sbjct: 251 VVTKEPIYIITEFMAKGSLL 270
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLE 131
+++M+CW +P +RP F + L+
Sbjct: 416 NIMMRCWKNRPEERPTFEYIQSVLD 440
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 8/24 (33%), Positives = 18/24 (75%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLE 131
++ +CW ++P DRP+F +++ +E
Sbjct: 278 IMTQCWQHQPEDRPNFAIILERIE 301
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 20/74 (27%)
Query: 5 IGKGHFGTVYNGNWHG--------EVAVKVL-----DVDYLDDEKTWEAFKLEVTTFRKT 51
+G G FG VY G G +VAVK L + D LD F +E K
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-------FLMEALIISKL 91
Query: 52 RHENLVLFMGACMK 65
H+N+V +G ++
Sbjct: 92 NHQNIVRCIGVSLQ 105
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 8/24 (33%), Positives = 18/24 (75%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLE 131
++ +CW ++P DRP+F +++ +E
Sbjct: 318 IMTQCWQHQPEDRPNFAIILERIE 341
Score = 30.8 bits (68), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 20/74 (27%)
Query: 5 IGKGHFGTVYNGNWHG--------EVAVKVL-----DVDYLDDEKTWEAFKLEVTTFRKT 51
+G G FG VY G G +VAVK L + D LD F +E K
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-------FLMEALIISKF 131
Query: 52 RHENLVLFMGACMK 65
H+N+V +G ++
Sbjct: 132 NHQNIVRCIGVSLQ 145
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 8/24 (33%), Positives = 18/24 (75%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLE 131
++ +CW ++P DRP+F +++ +E
Sbjct: 292 IMTQCWQHQPEDRPNFAIILERIE 315
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 10/69 (14%)
Query: 5 IGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+G G FG VY G G +VAVK L + E+ F +E K H+N+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQDELDFLMEALIISKLNHQNI 110
Query: 57 VLFMGACMK 65
V +G ++
Sbjct: 111 VRCIGVSLQ 119
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 8/24 (33%), Positives = 18/24 (75%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLE 131
++ +CW ++P DRP+F +++ +E
Sbjct: 292 IMTQCWQHQPEDRPNFAIILERIE 315
Score = 30.4 bits (67), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 10/69 (14%)
Query: 5 IGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+G G FG VY G G +VAVK L + E+ F +E K H+N+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQDELDFLMEALIISKFNHQNI 110
Query: 57 VLFMGACMK 65
V +G ++
Sbjct: 111 VRCIGVSLQ 119
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 8/24 (33%), Positives = 18/24 (75%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLE 131
++ +CW ++P DRP+F +++ +E
Sbjct: 295 IMTQCWQHQPEDRPNFAIILERIE 318
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 20/74 (27%)
Query: 5 IGKGHFGTVYNGNWHG--------EVAVKVL-----DVDYLDDEKTWEAFKLEVTTFRKT 51
+G G FG VY G G +VAVK L + D LD F +E K
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-------FLMEALIISKF 108
Query: 52 RHENLVLFMGACMK 65
H+N+V +G ++
Sbjct: 109 NHQNIVRCIGVSLQ 122
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 8/24 (33%), Positives = 18/24 (75%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLE 131
++ +CW ++P DRP+F +++ +E
Sbjct: 278 IMTQCWQHQPEDRPNFAIILERIE 301
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 20/74 (27%)
Query: 5 IGKGHFGTVYNGNWHG--------EVAVKVL-----DVDYLDDEKTWEAFKLEVTTFRKT 51
+G G FG VY G G +VAVK L + D LD F +E K
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-------FLMEALIISKF 91
Query: 52 RHENLVLFMGACMK 65
H+N+V +G ++
Sbjct: 92 NHQNIVRCIGVSLQ 105
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 8/24 (33%), Positives = 18/24 (75%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLE 131
++ +CW ++P DRP+F +++ +E
Sbjct: 277 IMTQCWQHQPEDRPNFAIILERIE 300
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 10/69 (14%)
Query: 5 IGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+G G FG VY G G +VAVK L + E+ F +E K H+N+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 57 VLFMGACMK 65
V +G ++
Sbjct: 96 VRCIGVSLQ 104
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 8/24 (33%), Positives = 18/24 (75%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLE 131
++ +CW ++P DRP+F +++ +E
Sbjct: 278 IMTQCWQHQPEDRPNFAIILERIE 301
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 20/74 (27%)
Query: 5 IGKGHFGTVYNGNWHG--------EVAVKVL-----DVDYLDDEKTWEAFKLEVTTFRKT 51
+G G FG VY G G +VAVK L + D LD F +E K
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-------FLMEALIISKF 91
Query: 52 RHENLVLFMGACMK 65
H+N+V +G ++
Sbjct: 92 NHQNIVRCIGVSLQ 105
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 8/24 (33%), Positives = 18/24 (75%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLE 131
++ +CW ++P DRP+F +++ +E
Sbjct: 277 IMTQCWQHQPEDRPNFAIILERIE 300
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 10/69 (14%)
Query: 5 IGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+G G FG VY G G +VAVK L + E+ F +E K H+N+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 57 VLFMGACMK 65
V +G ++
Sbjct: 96 VRCIGVSLQ 104
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 8/24 (33%), Positives = 18/24 (75%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLE 131
++ +CW ++P DRP+F +++ +E
Sbjct: 284 IMTQCWQHQPEDRPNFAIILERIE 307
Score = 30.8 bits (68), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 20/74 (27%)
Query: 5 IGKGHFGTVYNGNWHG--------EVAVKVL-----DVDYLDDEKTWEAFKLEVTTFRKT 51
+G G FG VY G G +VAVK L + D LD F +E K
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-------FLMEALIISKF 97
Query: 52 RHENLVLFMGACMK 65
H+N+V +G ++
Sbjct: 98 NHQNIVRCIGVSLQ 111
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 8/24 (33%), Positives = 18/24 (75%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLE 131
++ +CW ++P DRP+F +++ +E
Sbjct: 294 IMTQCWQHQPEDRPNFAIILERIE 317
Score = 30.8 bits (68), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 20/74 (27%)
Query: 5 IGKGHFGTVYNGNWHG--------EVAVKVL-----DVDYLDDEKTWEAFKLEVTTFRKT 51
+G G FG VY G G +VAVK L + D LD F +E K
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-------FLMEALIISKF 107
Query: 52 RHENLVLFMGACMK 65
H+N+V +G ++
Sbjct: 108 NHQNIVRCIGVSLQ 121
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 8/24 (33%), Positives = 18/24 (75%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLE 131
++ +CW ++P DRP+F +++ +E
Sbjct: 269 IMTQCWQHQPEDRPNFAIILERIE 292
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 10/69 (14%)
Query: 5 IGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+G G FG VY G G +VAVK L + E+ F +E K H+N+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQDELDFLMEALIISKFNHQNI 87
Query: 57 VLFMGACMK 65
V +G ++
Sbjct: 88 VRCIGVSLQ 96
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 5 IGKGHFGTVYNGNW------HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
+G G FG V +G VA+K L V Y EK F E + + H N++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHPNIIR 110
Query: 59 FMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKM 97
G K + IVT +L + + + +F + ++
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL 149
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKLPKK----RILARSPSHPLNL 149
+++ CW ++RP F ++ L+KL + +I+ + + P NL
Sbjct: 282 LMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 44 EVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQ 103
E+ RK +HEN+V P HL +V +G L+ I + K + ST+ +Q
Sbjct: 70 EIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRI-VEKGFYTEKDASTLIRQ 128
Query: 104 I 104
+
Sbjct: 129 V 129
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 5 IGKGHFGTVYNGNW------HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
+G G FG V +G VA+K L V Y EK F E + + H N++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHPNIIR 110
Query: 59 FMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKM 97
G K + IVT +L + + + +F + ++
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL 149
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKLPKK----RILARSPSHPLNL 149
+++ CW ++RP F ++ L+KL + +I+ + + P NL
Sbjct: 282 LMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 5 IGKGHFGTVYNGNW------HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
+G G FG V +G VA+K L V Y EK F E + + H N++
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHPNIIR 81
Query: 59 FMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKM 97
G K + IVT +L + + + +F + ++
Sbjct: 82 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL 120
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKLPKK----RILARSPSHPLNL 149
+++ CW ++RP F ++ L+KL + +I+ + + P NL
Sbjct: 253 LMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNL 298
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 54/125 (43%), Gaps = 14/125 (11%)
Query: 1 MGDRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK 50
+G +G+G FG V G +VAVK+L D + + + ++E+
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKM-I 90
Query: 51 TRHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKE---KFALNKMSTVGQQISQD 107
+H+N++ +GAC + L ++ + L + + +F+ N +Q+S
Sbjct: 91 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSK 150
Query: 108 VLMKC 112
L+ C
Sbjct: 151 DLVSC 155
Score = 27.3 bits (59), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 87 IYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKL 133
+ KE ++K S ++ ++ CW PS RP F L++ L+++
Sbjct: 264 LLKEGHRMDKPSNCTNELYM-MMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
Query: 5 IGKGHFGTV----YNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
+G+GHFG V Y+ G VAVK L D ++ +K E+ R HE+++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRS--GWKQEIDILRTLYHEHII 96
Query: 58 LFMGAC 63
+ G C
Sbjct: 97 KYKGCC 102
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
Query: 5 IGKGHFGTV----YNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
+G+GHFG V Y+ G VAVK L D ++ +K E+ R HE+++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRS--GWKQEIDILRTLYHEHII 79
Query: 58 LFMGAC 63
+ G C
Sbjct: 80 KYKGCC 85
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 21/153 (13%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
+G +G+G FG V + G VAVK+L E +L++
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKIL-IHIGH 89
Query: 53 HENLVLFMGACMKPPH-LAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVL-- 109
H N+V +GAC KP L ++ C L T + + +F K + +D L
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK------DLYKDFLTL 143
Query: 110 --MKCWSYKPSDRPDFITLMKSLEK-LPKKRIL 139
+ C+S++ + +F+ K + + L + IL
Sbjct: 144 EHLICYSFQVAKGMEFLASRKXIHRDLAARNIL 176
Score = 26.2 bits (56), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 109 LMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW +PS RP F L++ L L
Sbjct: 280 MLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Query: 5 IGKGHFGTVYNGN--WHGEV-AVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
IG G FG VY + EV A+K + + W+ EV +K RH N + + G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 62 ACMKPPHLAIVTSKCNG 78
++ +V C G
Sbjct: 83 CYLREHTAWLVMEYCLG 99
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKLPKKR 137
++++CW +P RP F + K LEK+ KR
Sbjct: 284 LMLQCWKQEPDKRPVFADISKDLEKMMVKR 313
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Query: 5 IGKGHFGTVYNGN--WHGEV-AVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
IG G FG VY + EV A+K + + W+ EV +K RH N + + G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 62 ACMKPPHLAIVTSKCNG 78
++ +V C G
Sbjct: 122 CYLREHTAWLVMEYCLG 138
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
Query: 5 IGKGHFGTV----YNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
+G+GHFG V Y+ G VAVK L D ++ +K E+ R HE+++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRS--GWKQEIDILRTLYHEHII 79
Query: 58 LFMGAC 63
+ G C
Sbjct: 80 KYKGCC 85
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKLPKKR 137
++++CW +P RP F + K LEK+ KR
Sbjct: 284 LMLQCWKQEPDKRPVFADISKDLEKMMVKR 313
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKLPKKR 137
++++CW +P RP F + K LEK+ KR
Sbjct: 284 LMLQCWKQEPDKRPVFADISKDLEKMMVKR 313
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 5 IGKGHFGTVYNGNW------HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
+G G FG V +G VA+K L V Y EK F E + + H N++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHPNIIR 110
Query: 59 FMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKM 97
G K + IVT +L + + + +F + ++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKLPKK----RILARSPSHPLNL 149
+++ CW ++RP F ++ L+KL + +I+ + + P NL
Sbjct: 282 LMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 5 IGKGHFGTVYNGNW------HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
+G G FG V +G VA+K L V Y EK F E + + H N++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHPNIIR 110
Query: 59 FMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKM 97
G K + IVT +L + + + +F + ++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKLPKK----RILARSPSHPLNL 149
+++ CW ++RP F ++ L+KL + +I+ + + P NL
Sbjct: 282 LMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 5 IGKGHFGTVYNGNW------HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
+G G FG V +G VA+K L V Y EK F E + + H N++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHPNIIR 110
Query: 59 FMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKM 97
G K + IVT +L + + + +F + ++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKLPKK----RILARSPSHPLNL 149
+++ CW ++RP F ++ L+KL + +I+ + + P NL
Sbjct: 282 LMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 5 IGKGHFGTVYNGNW------HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
+G G FG V +G VA+K L V Y EK F E + + H N++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHPNIIR 110
Query: 59 FMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKM 97
G K + IVT +L + + + +F + ++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKLPKK----RILARSPSHPLNL 149
+++ CW ++RP F ++ L+KL + +I+ + + P NL
Sbjct: 282 LMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 5 IGKGHFGTVYNGNW------HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
+G G FG V +G VA+K L V Y EK F E + + H N++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHPNIIR 110
Query: 59 FMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKM 97
G K + IVT +L + + + +F + ++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKLPKK----RILARSPSHPLNL 149
+++ CW ++RP F ++ L+KL + +I+ + + P NL
Sbjct: 282 LMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 5 IGKGHFGTVYNGNW------HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
+G G FG V +G VA+K L V Y EK F E + + H N++
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHPNIIR 98
Query: 59 FMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKM 97
G K + IVT +L + + + +F + ++
Sbjct: 99 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 137
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKLPKK----RILARSPSHPLNL 149
+++ CW ++RP F ++ L+KL + +I+ + + P NL
Sbjct: 270 LMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNL 315
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 5 IGKGHFGTVYNGNW------HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
+G G FG V +G VA+K L V Y EK F E + + H N++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHPNIIR 110
Query: 59 FMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKM 97
G K + IVT +L + + + +F + ++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKLPKK----RILARSPSHPLNL 149
+++ CW ++RP F ++ L+KL + +I+ + + P NL
Sbjct: 282 LMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 5 IGKGHFGTVYNGNW------HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
+G G FG V +G VA+K L V Y EK F E + + H N++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHPNIIR 110
Query: 59 FMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKM 97
G K + IVT +L + + + +F + ++
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 149
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKLPKK----RILARSPSHPLNL 149
+++ CW ++RP F ++ L+KL + +I+ + + P NL
Sbjct: 282 LMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 5 IGKGHFGTVYNGNW------HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
+G G FG V +G VA+K L V Y EK F E + + H N++
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHPNIIR 81
Query: 59 FMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKM 97
G K + IVT +L + + + +F + ++
Sbjct: 82 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 120
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKLPKK----RILARSPSHPLNL 149
+++ CW ++RP F ++ L+KL + +I+ + + P NL
Sbjct: 253 LMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNL 298
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 31.2 bits (69), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 5 IGKGHFGTVYNGNW------HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
+G G FG V +G VA+K L V Y EK F E + + H N++
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT--EKQRRDFLGEASIMGQFDHPNIIR 108
Query: 59 FMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKM 97
G K + IVT +L + + + +F + ++
Sbjct: 109 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 147
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKLPKK----RILARSPSHPLNL 149
+++ CW ++RP F ++ L+KL + +I+ + + P NL
Sbjct: 280 LMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNL 325
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 10/90 (11%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
G +G G FG V +G VAVK+L E+ +L+V ++
Sbjct: 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 85
Query: 53 HENLVLFMGAC-MKPPHLAIVTSKCNGHTL 81
H N+V +GAC + P L I C G L
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLL 115
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEK 132
D++ CW P RP F +++ +EK
Sbjct: 279 DIMKTCWDADPLKRPTFKQIVQLIEK 304
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 10/90 (11%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
G +G G FG V +G VAVK+L E+ +L+V ++
Sbjct: 45 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 103
Query: 53 HENLVLFMGAC-MKPPHLAIVTSKCNGHTL 81
H N+V +GAC + P L I C G L
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLL 133
Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEK 132
D++ CW P RP F +++ +EK
Sbjct: 297 DIMKTCWDADPLKRPTFKQIVQLIEK 322
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 10/90 (11%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
G +G G FG V +G VAVK+L E+ +L+V ++
Sbjct: 50 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 108
Query: 53 HENLVLFMGAC-MKPPHLAIVTSKCNGHTL 81
H N+V +GAC + P L I C G L
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEK 132
D++ CW P RP F +++ +EK
Sbjct: 302 DIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 30.8 bits (68), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 10/90 (11%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
G +G G FG V +G VAVK+L E+ +L+V ++
Sbjct: 50 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 108
Query: 53 HENLVLFMGAC-MKPPHLAIVTSKCNGHTL 81
H N+V +GAC + P L I C G L
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEK 132
D++ CW P RP F +++ +EK
Sbjct: 302 DIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 30.8 bits (68), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 10/89 (11%)
Query: 2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH 53
G +G G FG V +G VAVK+L E+ +L+V ++ H
Sbjct: 44 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN-H 102
Query: 54 ENLVLFMGAC-MKPPHLAIVTSKCNGHTL 81
N+V +GAC + P L I C G L
Sbjct: 103 MNIVNLLGACTIGGPTLVITEYCCYGDLL 131
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEK 132
D++ CW P RP F +++ +EK
Sbjct: 295 DIMKTCWDADPLKRPTFKQIVQLIEK 320
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 30.8 bits (68), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 1 MGDRIGKGHFGTVYNGNWH---GEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
+GD +G G FG V G +VAVK+L+ + + E+ + RH +++
Sbjct: 20 LGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHII 79
Query: 58 LFMGACMKPPHLAIVTSKCNGHTLYTNI 85
P + +V +G L+ I
Sbjct: 80 KLYQVISTPSDIFMVMEYVSGGELFDYI 107
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 12/115 (10%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
+G +G+G FG V + G VAVK+L E +L++
Sbjct: 26 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL-IHIGH 84
Query: 53 HENLVLFMGACMKPPH-LAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
H N+V +GAC KP L ++ C L T + + +F K T G + Q
Sbjct: 85 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK--TKGARFRQ 137
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 109 LMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW +PS RP F L++ L L
Sbjct: 329 MLDCWHGEPSQRPTFSELVEHLGNL 353
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Query: 1 MGDRIGKGHFGTVYNGNWH---GEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
+GD +G G FG V G +VAVK+L+ + K E+ + RH +++
Sbjct: 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHII 74
Query: 58 LFMGACMKPPHLAIVTSKCNGHTLYTNI 85
P +V +G L+ I
Sbjct: 75 KLYQVISTPTDFFMVMEYVSGGELFDYI 102
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKLPK 135
++ KCW ++PS+R F L++ E L K
Sbjct: 263 LMRKCWEFQPSNRTSFQNLIEGFEALLK 290
Score = 30.0 bits (66), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
Query: 5 IGKGHFGTVY------NGNWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
+G+GHFG V G+ GE VAVK L + + K E+ R HEN+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA--DLKKEIEILRNLYHENIV 74
Query: 58 LFMGAC 63
+ G C
Sbjct: 75 KYKGIC 80
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 30.4 bits (67), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Query: 1 MGDRIGKGHFGTVYNGNWH---GEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
+GD +G G FG V G +VAVK+L+ + K E+ + RH +++
Sbjct: 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHII 74
Query: 58 LFMGACMKPPHLAIVTSKCNGHTLYTNI 85
P +V +G L+ I
Sbjct: 75 KLYQVISTPTDFFMVMEYVSGGELFDYI 102
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 30.4 bits (67), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKLPK 135
++ KCW ++PS+R F L++ E L K
Sbjct: 275 LMRKCWEFQPSNRTSFQNLIEGFEALLK 302
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
Query: 5 IGKGHFGTVY------NGNWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
+G+GHFG V G+ GE VAVK L + + K E+ R HEN+V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA--DLKKEIEILRNLYHENIV 86
Query: 58 LFMGAC 63
+ G C
Sbjct: 87 KYKGIC 92
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 30.4 bits (67), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 51/136 (37%), Gaps = 31/136 (22%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
+G +G+G FG V + G VAVK+L E +L++
Sbjct: 33 LGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKIL-IHIGH 91
Query: 53 HENLVLFMGACMKPPH-LAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMK 111
H N+V +GAC KP L ++ C L T + + +F
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV------------------ 133
Query: 112 CWSYKPSD-RPDFITL 126
YKP D DF+TL
Sbjct: 134 --PYKPEDLYKDFLTL 147
Score = 26.2 bits (56), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 109 LMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW +PS RP F L++ L L
Sbjct: 284 MLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 30.4 bits (67), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 12/115 (10%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
+G +G+G FG V + G VAVK+L E +L++
Sbjct: 24 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL-IHIGH 82
Query: 53 HENLVLFMGACMKPPH-LAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
H N+V +GAC KP L ++ C L T + + +F K T G + Q
Sbjct: 83 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK--TKGARFRQ 135
Score = 26.2 bits (56), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 109 LMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW +PS RP F L++ L L
Sbjct: 327 MLDCWHGEPSQRPTFSELVEHLGNL 351
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 30.4 bits (67), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 12/115 (10%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
+G +G+G FG V + G VAVK+L E +L++
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL-IHIGH 89
Query: 53 HENLVLFMGACMKPPH-LAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
H N+V +GAC KP L ++ C L T + + +F K T G + Q
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK--TKGARFRQ 142
Score = 26.2 bits (56), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 109 LMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW +PS RP F L++ L L
Sbjct: 334 MLDCWHGEPSQRPTFSELVEHLGNL 358
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 30.4 bits (67), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 12/115 (10%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
+G +G+G FG V + G VAVK+L E +L++
Sbjct: 33 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL-IHIGH 91
Query: 53 HENLVLFMGACMKPPH-LAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
H N+V +GAC KP L ++ C L T + + +F K T G + Q
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK--TKGARFRQ 144
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 109 LMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW +PS RP F L++ L L
Sbjct: 336 MLDCWHGEPSQRPTFSELVEHLGNL 360
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 4 RIGKGHFGT---VYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+IG+G FG V + + +K +++ + ++ E+ + EV +H N+V +
Sbjct: 31 KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREES-RREVAVLANMKHPNIVQYR 89
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIYK 89
+ + L IV C G L+ I+ K
Sbjct: 90 ESFEENGSLYIVMDYCEGGDLFKRINAQK 118
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 30.0 bits (66), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 4 RIGKGHFGTV-------YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
++GKG+FG+V N VAVK L E+ F+ E+ + +H+N+
Sbjct: 16 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQHDNI 72
Query: 57 VLFMGAC 63
V + G C
Sbjct: 73 VKYKGVC 79
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 4 RIGKGHFGTV-------YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
++GKG+FG+V N VAVK L E+ F+ E+ + +H+N+
Sbjct: 15 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQHDNI 71
Query: 57 VLFMGAC 63
V + G C
Sbjct: 72 VKYKGVC 78
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 30.0 bits (66), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 4 RIGKGHFGTV-------YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
++GKG+FG+V N VAVK L E+ F+ E+ + +H+N+
Sbjct: 21 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQHDNI 77
Query: 57 VLFMGAC 63
V + G C
Sbjct: 78 VKYKGVC 84
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 30.0 bits (66), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 10/102 (9%)
Query: 1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
+G +G+G FG V + G VAVK+L E +L++
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKIL-IHIGH 89
Query: 53 HENLVLFMGACMKPPH-LAIVTSKCNGHTLYTNIHIYKEKFA 93
H N+V +GAC KP L ++ C L T + + +F
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 131
Score = 26.2 bits (56), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 109 LMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW +PS RP F L++ L L
Sbjct: 280 MLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 30.0 bits (66), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 6/78 (7%)
Query: 4 RIGKGHFGTVY---NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+G G FG VY N A KV+D E+ E + +E+ H N+V +
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 61 GACMKPPHLAIVTSKCNG 78
A +L I+ C G
Sbjct: 101 DAFYYENNLWILIEFCAG 118
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 30.0 bits (66), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 4 RIGKGHFGTV-------YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
++GKG+FG+V N VAVK L E+ F+ E+ + +H+N+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQHDNI 76
Query: 57 VLFMGAC 63
V + G C
Sbjct: 77 VKYKGVC 83
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 30.0 bits (66), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 4 RIGKGHFGTV-------YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
++GKG+FG+V N VAVK L E+ F+ E+ + +H+N+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQHDNI 73
Query: 57 VLFMGAC 63
V + G C
Sbjct: 74 VKYKGVC 80
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 30.0 bits (66), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 6/78 (7%)
Query: 4 RIGKGHFGTVY---NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+G G FG VY N A KV+D E+ E + +E+ H N+V +
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 61 GACMKPPHLAIVTSKCNG 78
A +L I+ C G
Sbjct: 101 DAFYYENNLWILIEFCAG 118
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 30.0 bits (66), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 4 RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
R+G G FG V+ G ++ +VAVK L + + +AF E + +H+ LV
Sbjct: 20 RLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM----SVQAFLEEANLMKTLQHDKLVRLYA 75
Query: 62 ACMKPPHLAIVTS 74
+ + I+T
Sbjct: 76 VVTREEPIYIITE 88
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 30.0 bits (66), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 6/78 (7%)
Query: 4 RIGKGHFGTVY---NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+G G FG VY N A KV+D E+ E + +E+ H N+V +
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 61 GACMKPPHLAIVTSKCNG 78
A +L I+ C G
Sbjct: 101 DAFYYENNLWILIEFCAG 118
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 30.0 bits (66), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 4 RIGKGHFGTV-------YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
++GKG+FG+V N VAVK L E+ F+ E+ + +H+N+
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQHDNI 91
Query: 57 VLFMGAC 63
V + G C
Sbjct: 92 VKYKGVC 98
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 30.0 bits (66), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 4 RIGKGHFGTV-------YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
++GKG+FG+V N VAVK L E+ F+ E+ + +H+N+
Sbjct: 48 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQHDNI 104
Query: 57 VLFMGAC 63
V + G C
Sbjct: 105 VKYKGVC 111
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 30.0 bits (66), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 4 RIGKGHFGTV-------YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
++GKG+FG+V N VAVK L E+ F+ E+ + +H+N+
Sbjct: 22 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQHDNI 78
Query: 57 VLFMGAC 63
V + G C
Sbjct: 79 VKYKGVC 85
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 30.0 bits (66), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 4 RIGKGHFGTV-------YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
++GKG+FG+V N VAVK L E+ F+ E+ + +H+N+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQHDNI 73
Query: 57 VLFMGAC 63
V + G C
Sbjct: 74 VKYKGVC 80
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 30.0 bits (66), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 4 RIGKGHFGTV-------YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
++GKG+FG+V N VAVK L E+ F+ E+ + +H+N+
Sbjct: 23 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQHDNI 79
Query: 57 VLFMGAC 63
V + G C
Sbjct: 80 VKYKGVC 86
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And
Selective Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And
Selective Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 30.0 bits (66), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 4 RIGKGHFGTV-------YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
++GKG+FG+V N VAVK L E+ F+ E+ + +H+N+
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQHDNI 91
Query: 57 VLFMGAC 63
V + G C
Sbjct: 92 VKYKGVC 98
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 30.0 bits (66), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 4 RIGKGHFGTV-------YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
++GKG+FG+V N VAVK L E+ F+ E+ + +H+N+
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQHDNI 74
Query: 57 VLFMGAC 63
V + G C
Sbjct: 75 VKYKGVC 81
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 30.0 bits (66), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 4 RIGKGHFGTV-------YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
++GKG+FG+V N VAVK L E+ F+ E+ + +H+N+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQHDNI 76
Query: 57 VLFMGAC 63
V + G C
Sbjct: 77 VKYKGVC 83
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 30.0 bits (66), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 4 RIGKGHFGTV-------YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
++GKG+FG+V N VAVK L E+ F+ E+ + +H+N+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQHDNI 76
Query: 57 VLFMGAC 63
V + G C
Sbjct: 77 VKYKGVC 83
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 29.6 bits (65), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 4 RIGKGHFGTV-------YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
++GKG+FG+V N VAVK L E+ F+ E+ + +H+N+
Sbjct: 24 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQHDNI 80
Query: 57 VLFMGAC 63
V + G C
Sbjct: 81 VKYKGVC 87
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 29.6 bits (65), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 4 RIGKGHFGTV-------YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
++GKG+FG+V N VAVK L E+ F+ E+ + +H+N+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQHDNI 73
Query: 57 VLFMGAC 63
V + G C
Sbjct: 74 VKYKGVC 80
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 29.6 bits (65), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 3 DRIGKGHFGTVYNG-NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
+++G G + TVY G N V V + +V +E T E++ ++ +HEN+V
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIV 66
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 29.6 bits (65), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSL 130
++ CW YK DRPDF+T+ + +
Sbjct: 245 LMSDCWIYKWEDRPDFLTVEQRM 267
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 29.6 bits (65), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 14/125 (11%)
Query: 1 MGDRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK 50
+G +G+G FG V G +VAVK+L D + + + ++E+
Sbjct: 21 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKM-I 79
Query: 51 TRHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKE---KFALNKMSTVGQQISQD 107
+H+N++ +GAC + L ++ + L + + +++ N +Q+S
Sbjct: 80 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 139
Query: 108 VLMKC 112
L+ C
Sbjct: 140 DLVSC 144
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 87 IYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKL 133
+ KE ++K S ++ ++ CW PS RP F L++ L+++
Sbjct: 253 LLKEGHRMDKPSNCTNELYM-MMRDCWHAVPSQRPTFKQLVEDLDRI 298
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 29.6 bits (65), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 5 IGKGHFGTVY---NGNWHGEVAVK-VLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
+G+G +G V N + VA+K L+ D DD+ + E+ ++ RHENLV +
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESD--DDKMVKKIAMREIKLLKQLRHENLVNLL 90
Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHIY 88
C K +V + HT+ ++ ++
Sbjct: 91 EVCKKKKRWYLVFEFVD-HTILDDLELF 117
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 29.6 bits (65), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 9/30 (30%), Positives = 21/30 (70%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK 136
+++ CWS P+DRP F ++ + L+++ ++
Sbjct: 307 NLMRLCWSKLPADRPSFCSIHRILQRMCER 336
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 29.6 bits (65), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 14/125 (11%)
Query: 1 MGDRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK 50
+G +G+G FG V G +VAVK+L D + + + ++E+
Sbjct: 24 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKM-I 82
Query: 51 TRHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKE---KFALNKMSTVGQQISQD 107
+H+N++ +GAC + L ++ + L + + +++ N +Q+S
Sbjct: 83 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 142
Query: 108 VLMKC 112
L+ C
Sbjct: 143 DLVSC 147
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 87 IYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKL 133
+ KE ++K S ++ ++ CW PS RP F L++ L+++
Sbjct: 256 LLKEGHRMDKPSNCTNELYM-MMRDCWHAVPSQRPTFKQLVEDLDRI 301
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 29.6 bits (65), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 14/125 (11%)
Query: 1 MGDRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK 50
+G +G+G FG V G +VAVK+L D + + + ++E+
Sbjct: 25 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKM-I 83
Query: 51 TRHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKE---KFALNKMSTVGQQISQD 107
+H+N++ +GAC + L ++ + L + + +++ N +Q+S
Sbjct: 84 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 143
Query: 108 VLMKC 112
L+ C
Sbjct: 144 DLVSC 148
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 87 IYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKL 133
+ KE ++K S ++ ++ CW PS RP F L++ L+++
Sbjct: 257 LLKEGHRMDKPSNCTNELYM-MMRDCWHAVPSQRPTFKQLVEDLDRI 302
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 29.6 bits (65), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 14/125 (11%)
Query: 1 MGDRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK 50
+G +G+G FG V G +VAVK+L D + + + ++E+
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKM-I 90
Query: 51 TRHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKE---KFALNKMSTVGQQISQD 107
+H+N++ +GAC + L ++ + L + + +++ N +Q+S
Sbjct: 91 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 150
Query: 108 VLMKC 112
L+ C
Sbjct: 151 DLVSC 155
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 87 IYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKL 133
+ KE ++K S ++ ++ CW PS RP F L++ L+++
Sbjct: 264 LLKEGHRMDKPSNCTNELYM-MMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 4 RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
++G G FG V+ G ++ +VAVK L + + +AF E + +H+ LV
Sbjct: 19 KLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM----SVQAFLEEANLMKTLQHDKLVRLYA 74
Query: 62 ACMKPPHLAIVT 73
K + I+T
Sbjct: 75 VVTKEEPIYIIT 86
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 29.3 bits (64), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 5/115 (4%)
Query: 1 MGDRIGKGHFGTVY---NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
+G +GKG FG VY H VA+KVL ++ E + E+ H N++
Sbjct: 27 IGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNIL 86
Query: 58 LFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKC 112
+ ++ LY + F + +T+ ++++ D LM C
Sbjct: 87 RLYNYFYDRRRIYLILEYAPRGELYKELQ-KSCTFDEQRTATIMEELA-DALMYC 139
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSL 130
++ CW YK DRPDF+T+ + +
Sbjct: 571 LMSDCWIYKWEDRPDFLTVEQRM 593
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 29.3 bits (64), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 3 DRIGKGHFGTVYNG---NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
+RIGKG FG V+ G VA+K++D++ +DE + E+T + + +
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIE--DIQQEITVLSQCDSSYVTKY 86
Query: 60 MGACMKPPHLAIVTSKCNGHT 80
G+ +K L I+ G +
Sbjct: 87 YGSYLKGSKLWIIMEYLGGGS 107
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 29.3 bits (64), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 14/125 (11%)
Query: 1 MGDRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK 50
+G +G+G FG V G +VAVK+L D + + + ++E+
Sbjct: 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKM-I 131
Query: 51 TRHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKE---KFALNKMSTVGQQISQD 107
+H+N++ +GAC + L ++ + L + + +++ N +Q+S
Sbjct: 132 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191
Query: 108 VLMKC 112
L+ C
Sbjct: 192 DLVSC 196
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 87 IYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKL 133
+ KE ++K S ++ ++ CW PS RP F L++ L+++
Sbjct: 305 LLKEGHRMDKPSNCTNELYM-MMRDCWHAVPSQRPTFKQLVEDLDRI 350
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 1 MGDRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK 50
+G +G+G FG V G +VAVK+L D + + + ++E+
Sbjct: 17 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKM-I 75
Query: 51 TRHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKE---KFALNKMSTVGQQISQD 107
+H+N++ +GAC + L ++ + L + + ++ N +Q+S
Sbjct: 76 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 135
Query: 108 VLMKC 112
L+ C
Sbjct: 136 DLVSC 140
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 87 IYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKL 133
+ KE ++K S ++ ++ CW PS RP F L++ L+++
Sbjct: 249 LLKEGHRMDKPSNCTNELYM-MMRDCWHAVPSQRPTFKQLVEDLDRI 294
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 1 MGDRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK 50
+G +G+G FG V G +VAVK+L D + + + ++E+
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKM-I 90
Query: 51 TRHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKE---KFALNKMSTVGQQISQD 107
+H+N++ +GAC + L ++ + L + + ++ N +Q+S
Sbjct: 91 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 150
Query: 108 VLMKC 112
L+ C
Sbjct: 151 DLVSC 155
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 87 IYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKL 133
+ KE ++K S ++ ++ CW PS RP F L++ L+++
Sbjct: 264 LLKEGHRMDKPSNCTNELYM-MMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 9/76 (11%)
Query: 5 IGKGHFGTVYNGNWHGE-------VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
IG G FG VY G VA+K L Y + ++ F E + H N++
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV--DFLGEAGIMGQFSHHNII 109
Query: 58 LFMGACMKPPHLAIVT 73
G K + I+T
Sbjct: 110 RLEGVISKYKPMMIIT 125
Score = 26.9 bits (58), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
++M+CW + + RP F ++ L+KL
Sbjct: 282 LMMQCWQQERARRPKFADIVSILDKL 307
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 14/125 (11%)
Query: 1 MGDRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK 50
+G +G+G FG V G +VAVK+L D + + + ++E+
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKM-I 90
Query: 51 TRHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKE---KFALNKMSTVGQQISQD 107
+H+N++ +GAC + L ++ + L + + +++ N +Q+S
Sbjct: 91 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSK 150
Query: 108 VLMKC 112
L+ C
Sbjct: 151 DLVSC 155
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 87 IYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKL 133
+ KE ++K S ++ ++ CW PS RP F L++ L+++
Sbjct: 264 LLKEGHRMDKPSNCTNELYM-MMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEK 132
+++ CW Y P RP F+ ++ S+++
Sbjct: 293 ELMRMCWQYNPKMRPSFLEIISSIKE 318
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEK 132
+++ CW Y P RP F+ ++ S+++
Sbjct: 258 ELMRMCWQYNPKMRPSFLEIISSIKE 283
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEK 132
+++ CW Y P RP F+ ++ S+++
Sbjct: 261 ELMRMCWQYNPKMRPSFLEIISSIKE 286
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEK 132
+++ CW Y P RP F+ ++ S+++
Sbjct: 264 ELMRMCWQYNPKMRPSFLEIISSIKE 289
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEK 132
+++ CW Y P RP F+ ++ S+++
Sbjct: 258 ELMRMCWQYNPKMRPSFLEIISSIKE 283
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEK 132
+++ CW Y P RP F+ ++ S+++
Sbjct: 264 ELMRMCWQYNPKMRPSFLEIISSIKE 289
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEK 132
+++ CW Y P RP F+ ++ S+++
Sbjct: 262 ELMRMCWQYNPKMRPSFLEIISSIKE 287
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEK 132
+++ CW Y P RP F+ ++ S+++
Sbjct: 265 ELMRMCWQYNPKMRPSFLEIISSIKE 290
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEK 132
+++ CW Y P RP F+ ++ S+++
Sbjct: 265 ELMRMCWQYNPKMRPSFLEIISSIKE 290
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEK 132
+++ CW Y P RP F+ ++ S+++
Sbjct: 271 ELMRMCWQYNPKMRPSFLEIISSIKE 296
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEK 132
+++ CW Y P RP F+ ++ S+++
Sbjct: 256 ELMRMCWQYNPKMRPSFLEIISSIKE 281
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEK 132
+++ CW Y P RP F+ ++ S+++
Sbjct: 271 ELMRMCWQYNPKMRPSFLEIISSIKE 296
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 7/30 (23%)
Query: 5 IGKGHFGTVYNGNW--HGE-----VAVKVL 27
+G G FGTVY G W GE VA+KVL
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVL 54
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 5 IGKGHFGTV---YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
+G+G +G V N VAVK++D+ D E K E+ + HEN+V F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEIXINKMLNHENVVKFYG 71
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNIH 86
+ + C+G L+ I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors:
Insights Into Hydrogen Bonding And Protein-Ligand
Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And
Selective Inhibition Of Chk1: Prediction And
Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And
Selective Inhibition Of Chk1: Prediction And
Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And
Selective Inhibition Of Chk1: Prediction And
Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 5 IGKGHFGTV---YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
+G+G +G V N VAVK++D+ D E K E+ + HEN+V F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNHENVVKFYG 72
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNIH 86
+ + C+G L+ I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIE 97
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle
Checkpoint Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In
Complex With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 5 IGKGHFGTV---YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
+G+G +G V N VAVK++D+ D E K E+ + HEN+V F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNHENVVKFYG 72
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNIH 86
+ + C+G L+ I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIE 97
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As
Potent Chk1 Inhibitors
Length = 295
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 5 IGKGHFGTV---YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
+G+G +G V N VAVK++D+ D E K E+ + HEN+V F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNHENVVKFYG 72
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNIH 86
+ + C+G L+ I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIE 97
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 5 IGKGHFGTV---YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
+G+G +G V N VAVK++D+ D E K E+ + HEN+V F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEIXINKMLNHENVVKFYG 71
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNIH 86
+ + C+G L+ I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 5 IGKGHFGTV---YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
+G+G +G V N VAVK++D+ D E K E+ + HEN+V F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNHENVVKFYG 71
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNIH 86
+ + C+G L+ I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 5 IGKGHFGTV---YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
+G+G +G V N VAVK++D+ D E K E+ + HEN+V F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNHENVVKFYG 71
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNIH 86
+ + C+G L+ I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 5 IGKGHFGTV---YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
+G+G +G V N VAVK++D+ D E K E+ + HEN+V F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNHENVVKFYG 72
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNIH 86
+ + C+G L+ I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIE 97
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 5 IGKGHFGTV---YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
+G+G +G V N VAVK++D+ D E K E+ + HEN+V F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNHENVVKFYG 71
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNIH 86
+ + C+G L+ I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 28/75 (37%)
Query: 4 RIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGAC 63
+G G FG VY A+ V E+ E + +E+ H +V +GA
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 64 MKPPHLAIVTSKCNG 78
L I+ C G
Sbjct: 86 YHDGKLWIMIEFCPG 100
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 5 IGKGHFGTV---YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
+G+G +G V N VAVK++D+ D E K E+ + HEN+V F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEIXINKMLNHENVVKFYG 72
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNIH 86
+ + C+G L+ I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIE 97
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 5 IGKGHFGTV---YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
+G+G +G V N VAVK++D+ D E K E+ + HEN+V F G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNHENVVKFYG 70
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNIH 86
+ + C+G L+ I
Sbjct: 71 HRREGNIQYLFLEYCSGGELFDRIE 95
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human
Chk1 Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human
Chk1 Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human
Chk1 Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human
Chk1 Kinase Domain
Length = 273
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 5 IGKGHFGTV---YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
+G+G +G V N VAVK++D+ D E K E+ + HEN+V F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNHENVVKFYG 71
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNIH 86
+ + C+G L+ I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 5 IGKGHFGTV---YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
+G+G +G V N VAVK++D+ D E K E+ + HEN+V F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNHENVVKFYG 72
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNIH 86
+ + C+G L+ I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIE 97
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With
Inhibitor 38
Length = 322
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 5 IGKGHFGTV---YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
+G+G +G V N VAVK++D+ D E K E+ + HEN+V F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNHENVVKFYG 71
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNIH 86
+ + C+G L+ I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 28/75 (37%)
Query: 4 RIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGAC 63
+G G FG VY A+ V E+ E + +E+ H +V +GA
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 64 MKPPHLAIVTSKCNG 78
L I+ C G
Sbjct: 78 YHDGKLWIMIEFCPG 92
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor
Binding Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor
Binding Site
Length = 271
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 5 IGKGHFGTV---YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
+G+G +G V N VAVK++D+ D E K E+ + HEN+V F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNHENVVKFYG 71
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNIH 86
+ + C+G L+ I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 1 MGDRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
+G +GKG FG VY +A+KVL L+ E + E+ RH N++
Sbjct: 19 IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNIL 78
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And
Inhibition By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And
Inhibition By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 1 MGDRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
+G +GKG FG VY +A+KVL L+ E + E+ RH N++
Sbjct: 18 IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNIL 77
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 5 IGKGHFGTV---YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
+G+G +G V N VAVK++D+ D E K E+ + HEN+V F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNHENVVKFYG 71
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNIH 86
+ + C+G L+ I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 3 DRIGKGHFGTVY---NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
D++G G TVY + + +VA+K + + + E+T + F+ EV + H+N+V
Sbjct: 17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76
Query: 60 MGACMKPPHLAIVTSKCNGHTL 81
+ + +V G TL
Sbjct: 77 IDVDEEDDCYYLVMEYIEGPTL 98
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 5 IGKGHFGTV---YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
+G+G +G V N VAVK++D+ D E K E+ + HEN+V F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNHENVVKFYG 72
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNIH 86
+ + C+G L+ I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIE 97
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 5 IGKGHFGTV---YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
+G+G +G V N VAVK++D+ D E K E+ + HEN+V F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNHENVVKFYG 71
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNIH 86
+ + C+G L+ I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 5 IGKGHFGTV---YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
+G+G +G V N VAVK++D+ D E K E+ + HEN+V F G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNHENVVKFYG 71
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNIH 86
+ + C+G L+ I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 1 MGDRIGKGHFGTVY---NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
+G +GKG FG VY N +A+KVL L+ + EV RH N++
Sbjct: 12 IGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 71
Query: 58 LFMG 61
G
Sbjct: 72 RLYG 75
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + SDRP F ++ L+KL
Sbjct: 251 LMLDCWQKERSDRPKFGQIVNMLDKL 276
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + SDRP F ++ L+KL
Sbjct: 266 LMLDCWQKERSDRPKFGQIVNMLDKL 291
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW + SDRP F ++ L+KL
Sbjct: 245 LMLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 3 DRIGKGHFGTVYNG---NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
++IGKG FG V+ G VA+K++D++ +DE + E+T + + +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE--DIQQEITVLSQCDSPYVTKY 70
Query: 60 MGACMKPPHLAIVTSKCNG 78
G+ +K L I+ G
Sbjct: 71 YGSYLKDTKLWIIMEYLGG 89
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 3 DRIGKGHFGTVYNG---NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
++IGKG FG V+ G VA+K++D++ +DE + E+T + + +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE--DIQQEITVLSQCDSPYVTKY 70
Query: 60 MGACMKPPHLAIVTSKCNG 78
G+ +K L I+ G
Sbjct: 71 YGSYLKDTKLWIIMEYLGG 89
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 5 IGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKT---WEAFKLEVTTFRKTRHENLVLF 59
IG+G F TVY G E V+V + D + T + FK E + +H N+V F
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRF 90
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 109 LMK-CWSYKPSDRPDFITLMKSLEKL 133
LMK CW+ P DRP F L L+ L
Sbjct: 263 LMKLCWAPSPQDRPSFSALGPQLDML 288
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 11/76 (14%)
Query: 5 IGKGHFGTVYNGNWHGE--------VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+G+G FG V+ H VAVK L E + F+ E +H+++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTMLQHQHI 82
Query: 57 VLFMGACMKPPHLAIV 72
V F G C + L +V
Sbjct: 83 VRFFGVCTEGRPLLMV 98
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Query: 5 IGKGHFGTVYNGNW--HGEVAVKVLDVDYLDDEKTWEAFKL---EVTTFRKTRHENLVLF 59
+G G FGTV+ G W GE + + ++D+ ++F+ + H ++V
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 60 MGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
+G C L +VT +L ++ ++ + G QI++
Sbjct: 81 LGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAK 126
>pdb|1QTT|A Chain A, Solution Structure Of The Oncoprotein P13mtcp1
pdb|1QTU|A Chain A, Solution Structure Of The Oncoprotein P13mtcp1
Length = 117
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 35 EKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHL 69
++TW A E T+F + R + + + +G +P HL
Sbjct: 28 QRTWVAVVEEETSFLRARVQQIQVPLGDAARPSHL 62
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 3 DRIGKGHFGTVYNG---NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
++IGKG FG V+ G VA+K++D++ +DE + E+T + + +
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE--DIQQEITVLSQCDSPYVTKY 85
Query: 60 MGACMKPPHLAIVTSKCNG 78
G+ +K L I+ G
Sbjct: 86 YGSYLKDTKLWIIMEYLGG 104
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 11/76 (14%)
Query: 5 IGKGHFGTVYNGNWHGE--------VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+G+G FG V+ H VAVK L E + F+ E +H+++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTMLQHQHI 105
Query: 57 VLFMGACMKPPHLAIV 72
V F G C + L +V
Sbjct: 106 VRFFGVCTEGRPLLMV 121
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 109 LMK-CWSYKPSDRPDFITLMKSLEKL 133
LMK CW+ P DRP F L L+ L
Sbjct: 264 LMKLCWAPSPQDRPSFSALGPQLDML 289
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 109 LMK-CWSYKPSDRPDFITLMKSLEKL 133
LMK CW+ P DRP F L L+ L
Sbjct: 276 LMKLCWAPSPQDRPSFSALGPQLDML 301
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Query: 5 IGKGHFGTVYNGNW--HGEVAVKVLDVDYLDDEKTWEAFKL---EVTTFRKTRHENLVLF 59
+G G FGTV+ G W GE + + ++D+ ++F+ + H ++V
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 60 MGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
+G C L +VT +L ++ ++ + G QI++
Sbjct: 99 LGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAK 144
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 11/76 (14%)
Query: 5 IGKGHFGTVYNGNWHGE--------VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+G+G FG V+ H VAVK L E + F+ E +H+++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTMLQHQHI 76
Query: 57 VLFMGACMKPPHLAIV 72
V F G C + L +V
Sbjct: 77 VRFFGVCTEGRPLLMV 92
>pdb|1A1X|A Chain A, Crystal Structure Of Mtcp-1 Involved In T Cell
Malignancies
Length = 108
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 35 EKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHL 69
++TW A E T+F + R + + + +G +P HL
Sbjct: 27 QRTWVAVVEEETSFLRARVQQIQVPLGDAARPSHL 61
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 3 DRIGKGHFGTVYNG---NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
++IGKG FG V+ G VA+K++D++ E E + E+T + + +
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKY 90
Query: 60 MGACMKPPHLAIVTSKCNG 78
G+ +K L I+ G
Sbjct: 91 YGSYLKDTKLWIIMEYLGG 109
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 1 MGDRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK 50
+G +G+G FG V G VAVK+L D +++ + ++E+
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKM-I 97
Query: 51 TRHENLVLFMGACMKPPHLAIVTS 74
+H+N++ +GAC + L ++
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVE 121
Score = 26.2 bits (56), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW PS RP F L++ L+++
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 109 LMK-CWSYKPSDRPDFITLMKSLEKL 133
LMK CW+ P DRP F L L+ L
Sbjct: 260 LMKLCWAPSPQDRPSFSALGPQLDML 285
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 11/84 (13%)
Query: 1 MGDRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK 50
+G +G+G FG V G VAVK+L D + + + ++E+
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKM-I 97
Query: 51 TRHENLVLFMGACMKPPHLAIVTS 74
+H+N++ +GAC + L ++
Sbjct: 98 GKHKNIITLLGACTQDGPLYVIVE 121
Score = 26.2 bits (56), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW PS RP F L++ L+++
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240- >arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240- >arg, Met302->leu) In Complex With
1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240- >arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 1 MGDRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
+G +GKG FG VY +A+KVL L+ + EV RH N++
Sbjct: 16 IGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNIL 75
Query: 58 LFMG 61
G
Sbjct: 76 RLYG 79
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 5 IGKGHFGTVYNGNW--HGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
+G G FGTVY G W GE + V ++++ K + E + ++
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 60 MGACM 64
+G C+
Sbjct: 117 LGICL 121
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An
Inhibitor Discovered Through Site-Directed Dynamic
Tethering
Length = 272
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 1 MGDRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
+G +GKG FG VY +A+KVL L+ + EV RH N++
Sbjct: 16 IGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNIL 75
Query: 58 LFMG 61
G
Sbjct: 76 RLYG 79
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 1 MGDRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK 50
+G +G+G FG V G VAVK+L D + + + ++E+
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKM-I 97
Query: 51 TRHENLVLFMGACMKPPHLAIVTS 74
+H+N++ +GAC + L ++ +
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVA 121
Score = 26.2 bits (56), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW PS RP F L++ L+++
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Query: 5 IGKGHFGTV---YNGNWHGEVAVKVLDVDYLD--DEKTWEAFKLEVTTFRKTRHENLVLF 59
IG+G +G V A+K+++ + + + K E K EV +K H N+
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 60 MGACMKPPHLAIVTSKCNGHTLYTNIHIY 88
++ +V C+G L ++++
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVF 122
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLE 131
D++ CW + P+ RP F+ ++ L+
Sbjct: 263 DLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLE 131
D++ CW + P+ RP F+ ++ L+
Sbjct: 264 DLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Query: 5 IGKGHFGTV---YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
+G+G +G V N VAVK++D+ D E K E+ HEN+V F G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINAMLNHENVVKFYG 72
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNIH 86
+ + C+G L+ I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIE 97
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 26.9 bits (58), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSL 130
D++ CW + P+ RP F+ ++ L
Sbjct: 263 DLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 26.9 bits (58), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 5 IGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
+GKG FG VY +A+KVL L+ E + E+ RH N++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNIL 77
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
+++ CW P +RP F L++ L L
Sbjct: 334 IMLDCWHRDPKERPRFAELVEKLGDL 359
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Query: 5 IGKGHFGTV---YNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
+G+G G V N VAVK++D+ D E K E+ + HEN+V F G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNHENVVKFYG 71
Query: 62 ACMKPPHLAIVTSKCNGHTLYTNIH 86
+ + C+G L+ I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIE 96
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 26.6 bits (57), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLE 131
D++ CW + P RP F+ ++ L+
Sbjct: 262 DLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 5 IGKGHFGTVYNGNWHGE--------VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
+G+G FG V+ + VAVK L D D+ + + F E +HE++
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLK-DASDNAR--KDFHREAELLTNLQHEHI 77
Query: 57 VLFMGACMKPPHLAIV 72
V F G C++ L +V
Sbjct: 78 VKFYGVCVEGDPLIMV 93
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 26.6 bits (57), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLE 131
D++ CW + P RP F+ ++ L+
Sbjct: 263 DLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLE 131
D++ CW + P RP F+ ++ L+
Sbjct: 263 DLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSL 130
D++ CW + P RP F+ ++ L
Sbjct: 260 DLMRMCWQFNPKMRPTFLEIVNLL 283
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 107 DVLMKCWSYKPSDRPDFITLMKSLE 131
D++ CW + P RP F+ ++ L+
Sbjct: 263 DLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 26.2 bits (56), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW PS RP F L++ L+++
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 26.2 bits (56), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW PS RP F L++ L+++
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 26.2 bits (56), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW PS RP F L++ L+++
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 26.2 bits (56), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW PS RP F L++ L+++
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 26.2 bits (56), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW PS RP F L++ L+++
Sbjct: 283 MMRDCWHAVPSQRPTFKQLVEDLDRI 308
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 26.2 bits (56), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW PS RP F L++ L+++
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 26.2 bits (56), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW PS RP F L++ L+++
Sbjct: 280 MMRDCWHAVPSQRPTFKQLVEDLDRI 305
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 26.2 bits (56), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW PS RP F L++ L+++
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 26.2 bits (56), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW PS RP F L++ L+++
Sbjct: 337 MMRDCWHAVPSQRPTFKQLVEDLDRI 362
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 26.2 bits (56), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 108 VLMKCWSYKPSDRPDFITLMKSLEKL 133
++ CW PS RP F L++ L+++
Sbjct: 278 MMRDCWHAVPSQRPTFKQLVEDLDRI 303
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 25.8 bits (55), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Query: 44 EVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNI---HIYKEKFALNKMSTV 100
E+ +K +HEN+V H +V +G L+ I +Y EK A S V
Sbjct: 56 EIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDA----SLV 111
Query: 101 GQQI 104
QQ+
Sbjct: 112 IQQV 115
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,755,026
Number of Sequences: 62578
Number of extensions: 181052
Number of successful extensions: 1357
Number of sequences better than 100.0: 398
Number of HSP's better than 100.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 156
Number of HSP's that attempted gapping in prelim test: 728
Number of HSP's gapped (non-prelim): 699
length of query: 157
length of database: 14,973,337
effective HSP length: 91
effective length of query: 66
effective length of database: 9,278,739
effective search space: 612396774
effective search space used: 612396774
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.7 bits)