BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6972
(133 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94900|GLUCL_DROME Glutamate-gated chloride channel OS=Drosophila melanogaster
GN=GluClalpha PE=1 SV=2
Length = 456
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 74/104 (71%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
YSCLKVDL+F R+ ++Y ++IP +LV S+++FWL+ AVPARV +GVTT+L T
Sbjct: 230 EYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMAT 289
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGR 104
++G ++LP VS A++VW GVC+ F++ +LLEF VNY R
Sbjct: 290 QTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASR 333
>sp|Q7TNC8|GLRA2_MOUSE Glycine receptor subunit alpha-2 OS=Mus musculus GN=Glra2 PE=2 SV=1
Length = 452
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 72/106 (67%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
++C++V R +Y ++IP +++V S+++FW+ +A PARV +G+TT+L T
Sbjct: 240 KFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTT 299
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKR 106
S+G R++LP VS + A+++W VC+ F++A+LLE+ VN+V R+
Sbjct: 300 QSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQH 345
>sp|P22771|GLRA2_RAT Glycine receptor subunit alpha-2 OS=Rattus norvegicus GN=Glra2 PE=1
SV=1
Length = 452
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 72/106 (67%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
++C++V R +Y ++IP +++V S+++FW+ +A PARV +G+TT+L T
Sbjct: 240 KFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTT 299
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKR 106
S+G R++LP VS + A+++W VC+ F++A+LLE+ VN+V R+
Sbjct: 300 QSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQH 345
>sp|P23416|GLRA2_HUMAN Glycine receptor subunit alpha-2 OS=Homo sapiens GN=GLRA2 PE=2 SV=1
Length = 452
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 72/106 (67%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
++C++V R +Y ++IP +++V S+++FW+ +A PARV +G+TT+L T
Sbjct: 240 KFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTT 299
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKR 106
S+G R++LP VS + A+++W VC+ F++A+LLE+ VN+V R+
Sbjct: 300 QSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQH 345
>sp|Q61603|GLRA4_MOUSE Glycine receptor subunit alpha-4 OS=Mus musculus GN=Glra4 PE=2 SV=3
Length = 456
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 72/106 (67%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
++C++V R +Y ++IP +++V S+++FW+ +A PARV +G+TT+L T
Sbjct: 240 KFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTT 299
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKR 106
S+G R++LP VS + A+++W VC+ F++A+LLE+ VN+V R+
Sbjct: 300 QSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQH 345
>sp|Q5JXX5|GLRA4_HUMAN Glycine receptor subunit alpha-4 OS=Homo sapiens GN=GLRA4 PE=2 SV=3
Length = 417
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 72/106 (67%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
++C++V R +Y ++IP +++V S+++FW+ +A PARV +G+TT+L T
Sbjct: 241 KFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTT 300
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKR 106
S+G R++LP VS + A+++W VC+ F++A+LLE+ +N+V R+
Sbjct: 301 QSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAINFVSRQH 346
>sp|P24524|GLRA3_RAT Glycine receptor subunit alpha-3 OS=Rattus norvegicus GN=Glra3 PE=2
SV=1
Length = 464
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 72/105 (68%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
++C++V R +Y ++IP +++V S+++FW+ +A PARV +G+TT+L T
Sbjct: 239 KFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTT 298
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRK 105
S+G R++LP VS + A+++W VC+ F++++LLE+ VN+V R+
Sbjct: 299 QSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQ 343
>sp|Q91XP5|GLRA3_MOUSE Glycine receptor subunit alpha-3 OS=Mus musculus GN=Glra3 PE=2 SV=2
Length = 464
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 72/105 (68%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
++C++V R +Y ++IP +++V S+++FW+ +A PARV +G+TT+L T
Sbjct: 239 KFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTT 298
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRK 105
S+G R++LP VS + A+++W VC+ F++++LLE+ VN+V R+
Sbjct: 299 QSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQ 343
>sp|O75311|GLRA3_HUMAN Glycine receptor subunit alpha-3 OS=Homo sapiens GN=GLRA3 PE=2 SV=2
Length = 464
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 72/105 (68%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
++C++V R +Y ++IP +++V S+++FW+ +A PARV +G+TT+L T
Sbjct: 239 KFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTT 298
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRK 105
S+G R++LP VS + A+++W VC+ F++++LLE+ VN+V R+
Sbjct: 299 QSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQ 343
>sp|P07727|GLRA1_RAT Glycine receptor subunit alpha-1 OS=Rattus norvegicus GN=Glra1 PE=1
SV=4
Length = 457
Score = 97.1 bits (240), Expect = 3e-20, Method: Composition-based stats.
Identities = 39/104 (37%), Positives = 71/104 (68%)
Query: 2 YSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTT 61
++C++ R +Y ++IP +++V S+I+FW+ +A PARV +G+TT+L T
Sbjct: 235 FTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQ 294
Query: 62 SNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRK 105
S+G R++LP VS + A+++W VC+ F++++LLE+ VN+V R+
Sbjct: 295 SSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQ 338
>sp|Q64018|GLRA1_MOUSE Glycine receptor subunit alpha-1 OS=Mus musculus GN=Glra1 PE=1 SV=2
Length = 457
Score = 97.1 bits (240), Expect = 3e-20, Method: Composition-based stats.
Identities = 39/104 (37%), Positives = 71/104 (68%)
Query: 2 YSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTT 61
++C++ R +Y ++IP +++V S+I+FW+ +A PARV +G+TT+L T
Sbjct: 235 FTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQ 294
Query: 62 SNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRK 105
S+G R++LP VS + A+++W VC+ F++++LLE+ VN+V R+
Sbjct: 295 SSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQ 338
>sp|P57695|GLRA1_BOVIN Glycine receptor subunit alpha-1 OS=Bos taurus GN=GLRA1 PE=2 SV=1
Length = 457
Score = 96.7 bits (239), Expect = 3e-20, Method: Composition-based stats.
Identities = 39/104 (37%), Positives = 71/104 (68%)
Query: 2 YSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTT 61
++C++ R +Y ++IP +++V S+I+FW+ +A PARV +G+TT+L T
Sbjct: 235 FTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQ 294
Query: 62 SNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRK 105
S+G R++LP VS + A+++W VC+ F++++LLE+ VN+V R+
Sbjct: 295 SSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQ 338
>sp|P23415|GLRA1_HUMAN Glycine receptor subunit alpha-1 OS=Homo sapiens GN=GLRA1 PE=1 SV=2
Length = 457
Score = 96.7 bits (239), Expect = 3e-20, Method: Composition-based stats.
Identities = 39/104 (37%), Positives = 71/104 (68%)
Query: 2 YSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTT 61
++C++ R +Y ++IP +++V S+I+FW+ +A PARV +G+TT+L T
Sbjct: 235 FTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQ 294
Query: 62 SNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRK 105
S+G R++LP VS + A+++W VC+ F++++LLE+ VN+V R+
Sbjct: 295 SSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQ 338
>sp|O93430|GLRA1_DANRE Glycine receptor subunit alphaZ1 OS=Danio rerio GN=glra1 PE=2 SV=1
Length = 444
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 78/130 (60%), Gaps = 12/130 (9%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
++C++ R +Y ++IP +++V S+++FW+ +A PARV +G+TT+L T
Sbjct: 230 KFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTT 289
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKRPLHNVVYRPGENPV 120
S+G R++LP VS + A+++W VC+ F++++LLE+ VN++ R+ H + R
Sbjct: 290 QSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFIARQ---HKELLR------ 340
Query: 121 TQTFQRNTYH 130
FQR H
Sbjct: 341 ---FQRRRRH 347
>sp|Q09453|GLRB4_CAEEL Glycine receptor subunit beta-type 4 OS=Caenorhabditis elegans
GN=ggr-1 PE=3 SV=2
Length = 473
Score = 82.0 bits (201), Expect = 9e-16, Method: Composition-based stats.
Identities = 35/94 (37%), Positives = 59/94 (62%)
Query: 13 RDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTLPVV 72
R+ + +IP ++V S+ +FWL+ AVP RV + +TT+L T S+ R LP
Sbjct: 245 REITHHIIQSYIPTSLIVIISWFSFWLDVEAVPGRVSLSITTLLTLATQSSAARMALPQA 304
Query: 73 SNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKR 106
S++ A++VW G CM F++++++EF VNY R++
Sbjct: 305 SDVKAIDVWMGTCMAFVFSAMIEFTVVNYCVRRK 338
>sp|P34904|GBRG4_CHICK Gamma-aminobutyric acid receptor subunit gamma-4 OS=Gallus gallus
GN=GABRG4 PE=2 SV=1
Length = 457
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
Y + V +R ++ +IP I+ V S+++FW++ ++ PAR +G+TT+L T
Sbjct: 241 EYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDSTPARTSLGITTVLTMTT 300
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNY-VGRKRPLHN 110
S R LP VS +TAM+++ VC F++A+L+E+ +NY VG K+PL +
Sbjct: 301 LSTISRKHLPRVSYITAMDLFVSVCFIFVFAALMEYATLNYLVGNKKPLEH 351
>sp|P26714|GBRB_LYMST Gamma-aminobutyric acid receptor subunit beta OS=Lymnaea stagnalis
PE=2 SV=1
Length = 499
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 64/101 (63%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
+Y L + R+ ++ ++P I++V S+++FW+ A ARV +G+TT+L T
Sbjct: 235 DYQRLSLIFQLQRNIGYFIFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTT 294
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNY 101
SNG RS+LP +S + A++++ +C F++A+LLE+ VNY
Sbjct: 295 ISNGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 335
>sp|Q75NA5|GBRB_MUSDO Gamma-aminobutyric acid receptor subunit beta OS=Musca domestica
GN=Rdl PE=1 SV=2
Length = 576
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 65/105 (61%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
NYS L ++ F R +Y ++IP ++V S+++FWL NA PARV +GVTT+L T
Sbjct: 251 NYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMTT 310
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRK 105
+ + LP +S + +++V+ G C ++ASLLE+ V Y+ ++
Sbjct: 311 LMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKR 355
>sp|Q9BLY8|GBRB_DROSI Gamma-aminobutyric acid receptor subunit beta OS=Drosophila
simulans GN=Rdl PE=2 SV=1
Length = 606
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 65/105 (61%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
NYS L ++ F R +Y ++IP ++V S+++FWL NA PARV +GVTT+L T
Sbjct: 253 NYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATPARVALGVTTVLTMTT 312
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRK 105
+ + LP +S + +++V+ G C ++ASLLE+ V Y+ ++
Sbjct: 313 LMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKR 357
>sp|P25123|GBRB_DROME Gamma-aminobutyric acid receptor subunit beta OS=Drosophila
melanogaster GN=Rdl PE=2 SV=3
Length = 606
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 65/105 (61%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
NYS L ++ F R +Y ++IP ++V S+++FWL NA PARV +GVTT+L T
Sbjct: 253 NYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTT 312
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRK 105
+ + LP +S + +++V+ G C ++ASLLE+ V Y+ ++
Sbjct: 313 LMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKR 357
>sp|Q08832|GBRB3_DROME Gamma-aminobutyric acid receptor subunit beta-like OS=Drosophila
melanogaster GN=Lcch3 PE=1 SV=2
Length = 496
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 62/100 (62%)
Query: 2 YSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTT 61
Y L + R+ ++ ++P I++V S+++FW+ A ARV +G+TT+L T
Sbjct: 243 YQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTI 302
Query: 62 SNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNY 101
S G RS+LP +S + A++++ +C F++A+LLE+ VNY
Sbjct: 303 STGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 342
>sp|Q17328|GLUCB_CAEEL Glutamate-gated chloride channel subunit beta OS=Caenorhabditis
elegans GN=glc-2 PE=1 SV=1
Length = 434
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 64/106 (60%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
+Y CL++ L+F R ++Y ++ P ++V S+++FW++ ++ RV +GVTT+L T
Sbjct: 231 SYGCLRMQLLFKRQFSYYLVQLYAPTTMIVIVSWVSFWIDLHSTAGRVALGVTTLLTMTT 290
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKR 106
+ + LP VS + ++VW G C F++ +LLE+ V+Y R
Sbjct: 291 MQSAINAKLPPVSYVKVVDVWLGACQTFVFGALLEYAFVSYQDSVR 336
>sp|Q99928|GBRG3_HUMAN Gamma-aminobutyric acid receptor subunit gamma-3 OS=Homo sapiens
GN=GABRG3 PE=2 SV=2
Length = 467
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 64/106 (60%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
+Y + + +R ++ +IP I+ V S+++FW++ +A PAR +G+TT+L T
Sbjct: 239 DYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMTT 298
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKR 106
S R +LP VS +TAM+++ VC F++A+L+E+ +NY R
Sbjct: 299 LSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCR 344
>sp|P27681|GBRG3_MOUSE Gamma-aminobutyric acid receptor subunit gamma-3 OS=Mus musculus
GN=Gabrg3 PE=2 SV=2
Length = 467
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 64/106 (60%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
+Y + + +R ++ +IP I+ V S+++FW++ +A PAR +G+TT+L T
Sbjct: 239 DYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTTLGITTVLTMTT 298
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKR 106
S R +LP VS +TAM+++ VC F++A+L+E+ +NY R
Sbjct: 299 LSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCR 344
>sp|P28473|GBRG3_RAT Gamma-aminobutyric acid receptor subunit gamma-3 OS=Rattus
norvegicus GN=Gabrg3 PE=2 SV=1
Length = 467
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 64/106 (60%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
+Y + + +R ++ +IP I+ V S+++FW++ +A PAR +G+TT+L T
Sbjct: 239 DYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTTLGITTVLTMTT 298
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKR 106
S R +LP VS +TAM+++ VC F++A+L+E+ +NY R
Sbjct: 299 LSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCR 344
>sp|P91730|GLUCB_HAECO Glutamate-gated chloride channel subunit beta OS=Haemonchus
contortus PE=2 SV=1
Length = 432
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 64/118 (54%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
+Y+CL++ L R ++Y ++ P ++V S+++FW++ ++ RV +GVTT+L T
Sbjct: 234 SYACLRMQLTLKRQFSYYLVQLYGPTTMIVIVSWVSFWIDMHSTAGRVALGVTTLLTMTT 293
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKRPLHNVVYRPGEN 118
+ LP VS + ++VW G C F++ +LLE+ V+Y +R R
Sbjct: 294 MQAAINAKLPPVSYVKVVDVWLGACQTFVFGALLEYAFVSYQDSQRQTEQAKSRAARK 351
>sp|P48169|GBRA4_HUMAN Gamma-aminobutyric acid receptor subunit alpha-4 OS=Homo sapiens
GN=GABRA4 PE=2 SV=2
Length = 554
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 13 RDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTLPVV 72
R ++ +IP I+ V S ++FW+ +VPAR + G+TT+L T S R +LP V
Sbjct: 254 RKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKV 313
Query: 73 SNLTAMNVWDGVCMCFIYASLLEFVCVNY 101
S TAM+ + VC F++++L+EF VNY
Sbjct: 314 SYATAMDWFIAVCFAFVFSALIEFAAVNY 342
>sp|P28471|GBRA4_RAT Gamma-aminobutyric acid receptor subunit alpha-4 OS=Rattus
norvegicus GN=Gabra4 PE=2 SV=1
Length = 552
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 13 RDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTLPVV 72
R ++ +IP I+ V S ++FW+ +VPAR + G+TT+L T S R +LP V
Sbjct: 254 RKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKV 313
Query: 73 SNLTAMNVWDGVCMCFIYASLLEFVCVNY 101
S TAM+ + VC F++++L+EF VNY
Sbjct: 314 SYATAMDWFIAVCFAFVFSALIEFAAVNY 342
>sp|P20237|GBRA4_BOVIN Gamma-aminobutyric acid receptor subunit alpha-4 OS=Bos taurus
GN=GABRA4 PE=2 SV=2
Length = 555
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 13 RDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTLPVV 72
R ++ +IP I+ V S ++FW+ +VPAR + G+TT+L T S R +LP V
Sbjct: 254 RKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKV 313
Query: 73 SNLTAMNVWDGVCMCFIYASLLEFVCVNY 101
S TAM+ + VC F++++L+EF VNY
Sbjct: 314 SYATAMDWFIAVCFAFVFSALIEFAAVNY 342
>sp|Q9D6F4|GBRA4_MOUSE Gamma-aminobutyric acid receptor subunit alpha-4 OS=Mus musculus
GN=Gabra4 PE=2 SV=1
Length = 552
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 13 RDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTLPVV 72
R ++ +IP I+ V S ++FW+ +VPAR + G+TT+L T S R +LP V
Sbjct: 254 RKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKV 313
Query: 73 SNLTAMNVWDGVCMCFIYASLLEFVCVNY 101
S TAM+ + VC F++++L+EF VNY
Sbjct: 314 SYATAMDWFIAVCFAFVFSALIEFAAVNY 342
>sp|P22723|GBRG2_MOUSE Gamma-aminobutyric acid receptor subunit gamma-2 OS=Mus musculus
GN=Gabrg2 PE=1 SV=3
Length = 474
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 71/125 (56%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
+Y + V +R ++ +IP ++V S+++FW+ +AVPAR +G+TT+L T
Sbjct: 257 DYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTT 316
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKRPLHNVVYRPGENPV 120
S R +LP VS +TAM+++ VC F++++L+E+ ++Y R + +NP+
Sbjct: 317 LSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYFVSNRKPSKDKDKKKKNPL 376
Query: 121 TQTFQ 125
+ F
Sbjct: 377 LRMFS 381
>sp|P18508|GBRG2_RAT Gamma-aminobutyric acid receptor subunit gamma-2 OS=Rattus
norvegicus GN=Gabrg2 PE=1 SV=1
Length = 466
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
+Y + V +R ++ +IP ++V S+++FW+ +AVPAR +G+TT+L T
Sbjct: 257 DYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTT 316
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNY-VGRKRP 107
S R +LP VS +TAM+++ VC F++++L+E+ ++Y V ++P
Sbjct: 317 LSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYFVSNRKP 364
>sp|P22300|GBRG2_BOVIN Gamma-aminobutyric acid receptor subunit gamma-2 OS=Bos taurus
GN=GABRG2 PE=2 SV=1
Length = 475
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 71/125 (56%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
+Y + V +R ++ +IP ++V S+++FW+ +AVPAR +G+TT+L T
Sbjct: 258 DYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTT 317
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKRPLHNVVYRPGENPV 120
S R +LP VS +TAM+++ VC F++++L+E+ ++Y R + +NP+
Sbjct: 318 LSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYFVSNRKPSKDKDKKKKNPL 377
Query: 121 TQTFQ 125
+ F
Sbjct: 378 LRMFS 382
>sp|Q8N1C3|GBRG1_HUMAN Gamma-aminobutyric acid receptor subunit gamma-1 OS=Homo sapiens
GN=GABRG1 PE=2 SV=2
Length = 465
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 63/101 (62%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
+Y + + +R ++ +IP I+ V S+++FW+ +AVPAR +G+TT+L T
Sbjct: 256 DYVIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVLTMTT 315
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNY 101
S R +LP VS +TAM+++ VC F++A+L+E+ ++Y
Sbjct: 316 LSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHY 356
>sp|P21548|GBRG2_CHICK Gamma-aminobutyric acid receptor subunit gamma-2 OS=Gallus gallus
GN=GABRG2 PE=2 SV=1
Length = 474
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 71/125 (56%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
+Y + V +R ++ +IP ++V S+++FW+ +AVPAR +G+TT+L T
Sbjct: 257 DYVVMSVYFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTT 316
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKRPLHNVVYRPGENPV 120
S R +LP VS +TAM+++ VC F++++L+E+ ++Y R + +NP+
Sbjct: 317 LSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYFVSNRKPSKDKDKKKKNPL 376
Query: 121 TQTFQ 125
+ F
Sbjct: 377 LRMFS 381
>sp|P30191|GBRA6_RAT Gamma-aminobutyric acid receptor subunit alpha-6 OS=Rattus
norvegicus GN=Gabra6 PE=2 SV=1
Length = 453
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
Y + V R ++ ++ P I+ V S ++FW+ +VPAR + G+TT+L T
Sbjct: 226 EYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTT 285
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNY 101
S R +LP VS TAM+ + VC F++++L+EF VNY
Sbjct: 286 LSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 326
>sp|Q5REA1|GBRG2_PONAB Gamma-aminobutyric acid receptor subunit gamma-2 OS=Pongo abelii
GN=GABRG2 PE=2 SV=1
Length = 467
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
+Y + V +R ++ +IP ++V S+++FW+ +AVPAR +G+TT+L T
Sbjct: 258 DYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTT 317
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNY-VGRKRP 107
S R +LP VS +TAM+++ VC F++++L+E+ ++Y V ++P
Sbjct: 318 LSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYFVSNRKP 365
>sp|P18507|GBRG2_HUMAN Gamma-aminobutyric acid receptor subunit gamma-2 OS=Homo sapiens
GN=GABRG2 PE=1 SV=2
Length = 467
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
+Y + V +R ++ +IP ++V S+++FW+ +AVPAR +G+TT+L T
Sbjct: 258 DYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTT 317
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNY-VGRKRP 107
S R +LP VS +TAM+++ VC F++++L+E+ ++Y V ++P
Sbjct: 318 LSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYFVSNRKP 365
>sp|P16305|GBRA6_MOUSE Gamma-aminobutyric acid receptor subunit alpha-6 OS=Mus musculus
GN=Gabra6 PE=1 SV=3
Length = 453
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
Y + V R ++ ++ P I+ V S ++FW+ +VPAR + G+TT+L T
Sbjct: 226 EYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTT 285
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNY 101
S R +LP VS TAM+ + VC F++++L+EF VNY
Sbjct: 286 LSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 326
>sp|O18276|GBRB_CAEEL Gamma-aminobutyric acid receptor subunit beta OS=Caenorhabditis
elegans GN=gab-1 PE=2 SV=3
Length = 550
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 61/101 (60%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
+Y L + R ++ ++P +++V S+++FW+ A ARV +G+TT+L T
Sbjct: 247 SYQRLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVALGITTVLTMTT 306
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNY 101
S G R +LP +S + +++++ +C F++A+LLE+ VNY
Sbjct: 307 ISTGVRQSLPRISYVKSIDIYLVMCFVFVFAALLEYAAVNY 347
>sp|Q16445|GBRA6_HUMAN Gamma-aminobutyric acid receptor subunit alpha-6 OS=Homo sapiens
GN=GABRA6 PE=2 SV=2
Length = 453
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
Y + V R ++ ++ P I+ V S ++FW+ +VPAR + G+TT+L T
Sbjct: 226 EYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTT 285
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNY 101
S R +LP VS TAM+ + VC F++++L+EF VNY
Sbjct: 286 LSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 326
>sp|Q9R0Y8|GBRG1_MOUSE Gamma-aminobutyric acid receptor subunit gamma-1 OS=Mus musculus
GN=Gabrg1 PE=2 SV=2
Length = 465
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 63/101 (62%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
+Y + + +R ++ +IP I+ V S+++FW+ +AVPAR +G+TT+L T
Sbjct: 256 DYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVLTMTT 315
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNY 101
S R +LP VS +TAM+++ VC F++A+L+E+ ++Y
Sbjct: 316 LSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHY 356
>sp|P23574|GBRG1_RAT Gamma-aminobutyric acid receptor subunit gamma-1 OS=Rattus
norvegicus GN=Gabrg1 PE=2 SV=1
Length = 465
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 63/101 (62%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
+Y + + +R ++ +IP I+ V S+++FW+ +AVPAR +G+TT+L T
Sbjct: 256 DYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVLTMTT 315
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNY 101
S R +LP VS +TAM+++ VC F++A+L+E+ ++Y
Sbjct: 316 LSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHY 356
>sp|Q90845|GBRA6_CHICK Gamma-aminobutyric acid receptor subunit alpha-6 OS=Gallus gallus
GN=GABRA6 PE=2 SV=1
Length = 465
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%)
Query: 1 NYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFT 60
Y + V R ++ ++ P I+ V S ++FW+ +VPAR + G+TT+L T
Sbjct: 226 EYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTT 285
Query: 61 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNY 101
S R +LP VS TAM+ + VC F++++L+EF VNY
Sbjct: 286 LSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 326
>sp|Q0II76|GBRR2_BOVIN Gamma-aminobutyric acid receptor subunit rho-2 OS=Bos taurus
GN=GABRR2 PE=2 SV=4
Length = 465
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 61/101 (60%)
Query: 2 YSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTT 61
Y+ L ++ R F+ + P ++V S+++FW++ AVPARV +G+TT+L T
Sbjct: 248 YNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTI 307
Query: 62 SNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYV 102
G +++P VS + A++++ V F++ S+LE+ VNY+
Sbjct: 308 ITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYL 348
>sp|A8MPY1|GBRR3_HUMAN Gamma-aminobutyric acid receptor subunit rho-3 OS=Homo sapiens
GN=GABRR3 PE=2 SV=2
Length = 467
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 62/101 (61%)
Query: 2 YSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTT 61
Y+ L ++ + R F+ + P I++V S+++FW++ AVPARV +G+TT+L T
Sbjct: 254 YNRLFINFVLRRHVFFFVLQTYFPAILMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTI 313
Query: 62 SNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYV 102
+++P VS L A++V+ V F++ S++E+ VNY+
Sbjct: 314 ITAVSASMPQVSYLKAVDVYLWVSSLFVFLSVIEYAAVNYL 354
>sp|P24046|GBRR1_HUMAN Gamma-aminobutyric acid receptor subunit rho-1 OS=Homo sapiens
GN=GABRR1 PE=2 SV=2
Length = 479
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 61/101 (60%)
Query: 2 YSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTT 61
Y+ L ++ R F+ + P ++V S+++FW++ AVPARV +G+TT+L T
Sbjct: 268 YNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTI 327
Query: 62 SNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYV 102
G +++P VS + A++++ V F++ S+LE+ VNY+
Sbjct: 328 ITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYL 368
>sp|P28476|GBRR2_HUMAN Gamma-aminobutyric acid receptor subunit rho-2 OS=Homo sapiens
GN=GABRR2 PE=2 SV=5
Length = 465
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 61/101 (60%)
Query: 2 YSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTT 61
Y+ L ++ R F+ + P ++V S+++FW++ AVPARV +G+TT+L T
Sbjct: 248 YNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMTTI 307
Query: 62 SNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYV 102
G +++P VS + A++++ V F++ S+LE+ VNY+
Sbjct: 308 ITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVLEYAAVNYL 348
>sp|P50573|GBRR3_RAT Gamma-aminobutyric acid receptor subunit rho-3 OS=Rattus norvegicus
GN=Gabrr3 PE=1 SV=1
Length = 464
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 22/144 (15%)
Query: 2 YSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTT 61
Y L ++ + R F+ + P +++V S+++FW++ AVPARV +G+TT+L T
Sbjct: 251 YYRLFINFVLRRHIFFFVLQTYFPAMLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTI 310
Query: 62 SNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYV------------GRKRPLH 109
G +++P VS + A++V+ V F++ S++E+ VNY+ G+ ++
Sbjct: 311 VTGVSASMPQVSYVKAVDVYMWVSSLFVFLSVIEYAAVNYLTTVEEWKQLNRRGKISGMY 370
Query: 110 NV----------VYRPGENPVTQT 123
N+ Y GE V QT
Sbjct: 371 NIDAVQAMAFDGCYHDGETDVDQT 394
>sp|P56475|GBRR1_MOUSE Gamma-aminobutyric acid receptor subunit rho-1 OS=Mus musculus
GN=Gabrr1 PE=2 SV=2
Length = 480
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 61/101 (60%)
Query: 2 YSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTT 61
Y+ L ++ R F+ + P ++V S+++FW++ AVPARV +G+TT+L T
Sbjct: 269 YNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTI 328
Query: 62 SNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYV 102
G +++P VS + A++++ V F++ S+LE+ VNY+
Sbjct: 329 ITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYL 369
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.140 0.455
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,624,217
Number of Sequences: 539616
Number of extensions: 1631236
Number of successful extensions: 4052
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 3939
Number of HSP's gapped (non-prelim): 121
length of query: 133
length of database: 191,569,459
effective HSP length: 99
effective length of query: 34
effective length of database: 138,147,475
effective search space: 4697014150
effective search space used: 4697014150
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 55 (25.8 bits)