BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6973
(115 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3T9K|A Chain A, Crystal Structure Of Acap1 C-portion Mutant S554d Fused
With Integrin Beta1 Peptide
pdb|3T9K|B Chain B, Crystal Structure Of Acap1 C-portion Mutant S554d Fused
With Integrin Beta1 Peptide
Length = 390
Score = 79.0 bits (193), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 41/61 (67%)
Query: 30 VPGNLTCADCAEAGPTWASLNLGLLLCIQCCGVHRCLGAHVSRVRSLELDEWPLNLGLLL 89
V GN C DC E P WAS+NLG+ LCIQC G+HR LG H S+VRSL LD W L L+
Sbjct: 42 VDGNAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLDSWEPELVKLM 101
Query: 90 C 90
C
Sbjct: 102 C 102
>pdb|3JUE|A Chain A, Crystal Structure Of Arfgap And Ank Repeat Domain Of Acap1
pdb|3JUE|B Chain B, Crystal Structure Of Arfgap And Ank Repeat Domain Of Acap1
Length = 368
Score = 78.6 bits (192), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 41/61 (67%)
Query: 30 VPGNLTCADCAEAGPTWASLNLGLLLCIQCCGVHRCLGAHVSRVRSLELDEWPLNLGLLL 89
V GN C DC E P WAS+NLG+ LCIQC G+HR LG H S+VRSL LD W L L+
Sbjct: 42 VDGNAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLDSWEPELVKLM 101
Query: 90 C 90
C
Sbjct: 102 C 102
>pdb|4F1P|A Chain A, Crystal Structure Of Mutant S554d For Arfgap And Ank
Repeat Domain Of Acap1
pdb|4F1P|B Chain B, Crystal Structure Of Mutant S554d For Arfgap And Ank
Repeat Domain Of Acap1
Length = 368
Score = 78.6 bits (192), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 41/61 (67%)
Query: 30 VPGNLTCADCAEAGPTWASLNLGLLLCIQCCGVHRCLGAHVSRVRSLELDEWPLNLGLLL 89
V GN C DC E P WAS+NLG+ LCIQC G+HR LG H S+VRSL LD W L L+
Sbjct: 42 VDGNAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLDSWEPELVKLM 101
Query: 90 C 90
C
Sbjct: 102 C 102
>pdb|2CRR|A Chain A, Solution Structure Of Arfgap Domain From Human Smap1
Length = 141
Score = 73.2 bits (178), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 29 RVPGNLTCADCAEAGPTWASLNLGLLLCIQCCGVHRCLGAHVSRVRSLELDEWPLNLGLL 88
R N CADC GP WAS N+G+ +CI+C G+HR LG H+SRV+S+ LD+W +
Sbjct: 25 REEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTAE--QI 82
Query: 89 LCIQCCG 95
C+Q G
Sbjct: 83 QCMQDMG 89
>pdb|2IQJ|A Chain A, Crystal Structure Of The Gap Domain Of Smap1l (Loc64744)
Stromal Membrane-Associated Protein 1-Like
pdb|2IQJ|B Chain B, Crystal Structure Of The Gap Domain Of Smap1l (Loc64744)
Stromal Membrane-Associated Protein 1-Like
Length = 134
Score = 72.8 bits (177), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 33 NLTCADCAEAGPTWASLNLGLLLCIQCCGVHRCLGAHVSRVRSLELDEW 81
N CADC GP WAS N+G+ +CI+C G+HR LG H+SRV+S+ LD+W
Sbjct: 27 NKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQW 75
>pdb|2P57|A Chain A, Gap Domain Of Znf289, An Id1-Regulated Zinc Finger
Protein
Length = 144
Score = 68.6 bits (166), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 30 VPGNLTCADCAEAGPTWASLNLGLLLCIQCCGVHRCLGAHVSRVRSLELD-EWPLNLGLL 88
VP N C DC P+WAS+ G+ LCI C GVHR LG H+S +RS ELD W N L
Sbjct: 34 VPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDSNW--NWFQL 91
Query: 89 LCIQCCG 95
C+Q G
Sbjct: 92 RCMQVGG 98
>pdb|2B0O|E Chain E, Crystal Structure Of Uplc1 Gap Domain
pdb|2B0O|F Chain F, Crystal Structure Of Uplc1 Gap Domain
pdb|2B0O|G Chain G, Crystal Structure Of Uplc1 Gap Domain
pdb|2B0O|H Chain H, Crystal Structure Of Uplc1 Gap Domain
Length = 301
Score = 68.6 bits (166), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 4 ILNKGNGKSRLQSSVETASLQSIRSRVPGNLTCADCAEAGPTWASLNLGLLLCIQCCGVH 63
++ +G+G + + ++SR PGN C DC A PTW S NLG+L CIQC GVH
Sbjct: 14 LVPRGSGHDGEPHDLTKLLIAEVKSR-PGNSQCCDCGAADPTWLSTNLGVLTCIQCSGVH 72
Query: 64 RCLGAHVSRVRSLELD 79
R LG SR++SL LD
Sbjct: 73 RELGVRFSRMQSLTLD 88
>pdb|3LVQ|E Chain E, The Crystal Structure Of Asap3 In Complex With Arf6 In
Trans State
pdb|3LVR|E Chain E, The Crystal Structure Of Asap3 In Complex With Arf6 In
Trans State Soaked With Calcium
Length = 497
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 23 LQSIRSRVPGNLTCADCAEAGPTWASLNLGLLLCIQCCGVHRCLGAHVSRVRSLELD 79
+ ++SR PGN C DC A PTW S NLG+L CIQC GVHR LG SR++SL LD
Sbjct: 14 IAEVKSR-PGNSQCCDCGAADPTWLSTNLGVLTCIQCSGVHRELGVRFSRMQSLTLD 69
>pdb|1DCQ|A Chain A, Crystal Structure Of The Arf-Gap Domain And Ankyrin
Repeats Of Papbeta
Length = 278
Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 38/60 (63%)
Query: 20 TASLQSIRSRVPGNLTCADCAEAGPTWASLNLGLLLCIQCCGVHRCLGAHVSRVRSLELD 79
T + S R+ GN C DC PTW S NLG+L CI+C G+HR LG H SR++SL LD
Sbjct: 4 TKEIISEVQRMTGNDVCCDCGAPDPTWLSTNLGILTCIECSGIHRELGVHYSRMQSLTLD 63
>pdb|2CRW|A Chain A, Solution Structure Of The Arfgap Domain Of
Adp-Ribosylation Factor Gtpaseactivating Protein 3
(Arfgap 3)
Length = 149
Score = 65.5 bits (158), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 23 LQSIRSRVPGNLTCADCAEAGPTWASLNLGLLLCIQCCGVHRCLGAHVSRVRSLELDE 80
+ +RS VP N C DC P+WAS+ G+ LCI C G HR LG H+S +RS ELD
Sbjct: 20 FKRLRS-VPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDS 76
>pdb|3FM8|C Chain C, Crystal Structure Of Full Length Centaurin Alpha-1 Bound
With The Fha Domain Of Kif13b (Capri Target)
pdb|3FM8|D Chain D, Crystal Structure Of Full Length Centaurin Alpha-1 Bound
With The Fha Domain Of Kif13b (Capri Target)
pdb|3MDB|C Chain C, Crystal Structure Of The Ternary Complex Of Full Length
Centaurin Alpha-1, Kif13b Fha Domain, And Ip4
pdb|3MDB|D Chain D, Crystal Structure Of The Ternary Complex Of Full Length
Centaurin Alpha-1, Kif13b Fha Domain, And Ip4
Length = 392
Score = 63.9 bits (154), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 31 PGNLTCADCAEAGPTWASLNLGLLLCIQCCGVHRCLGAHVSRVRSLELDEW 81
PGN CADC P WAS LG+ +C+ C G+HR + VS+V+S+ LD W
Sbjct: 34 PGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNI-PQVSKVKSVRLDAW 83
>pdb|3FEH|A Chain A, Crystal Structure Of Full Length Centaurin Alpha-1
pdb|3LJU|X Chain X, Crystal Structure Of Full Length Centaurin Alpha-1 Bound
With The Head Group Of Pip3
Length = 386
Score = 63.9 bits (154), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 31 PGNLTCADCAEAGPTWASLNLGLLLCIQCCGVHRCLGAHVSRVRSLELDEW 81
PGN CADC P WAS LG+ +C+ C G+HR + VS+V+S+ LD W
Sbjct: 32 PGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNI-PQVSKVKSVRLDAW 81
>pdb|2OWA|A Chain A, Crystal Structure Of Putative Gtpase Activating Protein
For Adp Ribosylation Factor From Cryptosporidium Parvum
(Cgd5_1040)
pdb|2OWA|B Chain B, Crystal Structure Of Putative Gtpase Activating Protein
For Adp Ribosylation Factor From Cryptosporidium Parvum
(Cgd5_1040)
Length = 138
Score = 63.2 bits (152), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 23 LQSIRSRVPGNLTCADCAEAGPTWASLNLGLLLCIQCCGVHRCLGAHVSRVRSLELDEW- 81
Q +R+R P N TC DC PTW SL+ + +C+ C HR +G H+S VRS +LD++
Sbjct: 27 FQIVRNR-PENRTCFDCESRNPTWLSLSFAVFICLNCSSDHRKMGVHISFVRSSDLDKFT 85
Query: 82 PLNL 85
P+ L
Sbjct: 86 PIQL 89
>pdb|3SUB|A Chain A, Crystal Structure Of The Catalytic Domain Of Plasmodium
Falciparum Arf Gtpase Activating Protein
pdb|3SUB|B Chain B, Crystal Structure Of The Catalytic Domain Of Plasmodium
Falciparum Arf Gtpase Activating Protein
Length = 163
Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 23 LQSIRSRVPGNLTCADCAEAGPTWASLNLGLLLCIQCCGVHRCLGAHVSRVRSLELD 79
+ ++ N C DC + P W S+N G+ LCI C GVHR LG H+S VRS+++D
Sbjct: 12 INRLKKEDESNNKCFDCGISNPDWVSVNHGIFLCINCSGVHRSLGVHISIVRSIKMD 68
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 83 LNLGLLLCIQCCGVHRCLGAHVSRVRFLELD 113
+N G+ LCI C GVHR LG H+S VR +++D
Sbjct: 38 VNHGIFLCINCSGVHRSLGVHISIVRSIKMD 68
>pdb|3O47|A Chain A, Crystal Structure Of Arfgap1-Arf1 Fusion Protein
pdb|3O47|B Chain B, Crystal Structure Of Arfgap1-Arf1 Fusion Protein
Length = 329
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 23 LQSIRSRVPGNLTCADCAEAGPTWASLNLGLLLCIQCCGVHRCLGAHVSRVRSLELDEW 81
L+ +R + N+ C +C P W S+ G+ +C++C G HR LG H+S VRS+ +D+W
Sbjct: 28 LKEVRVQDENNV-CFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMDKW 85
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 83 LNLGLLLCIQCCGVHRCLGAHVSRVRFLELDEW 115
+ G+ +C++C G HR LG H+S VR + +D+W
Sbjct: 53 VTYGIWICLECSGRHRGLGVHLSFVRSVTMDKW 85
>pdb|3DWD|A Chain A, Crystal Structure Of The Arfgap Domain Of Human Arfgap1
pdb|3DWD|B Chain B, Crystal Structure Of The Arfgap Domain Of Human Arfgap1
Length = 147
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 23 LQSIRSRVPGNLTCADCAEAGPTWASLNLGLLLCIQCCGVHRCLGAHVSRVRSLELDEW 81
L+ +R + N+ C +C P W S+ G+ +C++C G HR LG H+S VRS+ +D+W
Sbjct: 29 LKEVRVQDENNV-CFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMDKW 86
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 83 LNLGLLLCIQCCGVHRCLGAHVSRVRFLELDEW 115
+ G+ +C++C G HR LG H+S VR + +D+W
Sbjct: 54 VTYGIWICLECSGRHRGLGVHLSFVRSVTMDKW 86
>pdb|2OLM|A Chain A, Arfgap Domain Of Hiv-1 Rev Binding Protein
Length = 140
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 30 VPGNLTCADCAEAGPTWASLNLGLLLCIQCCGVHRCLGAHVSRVRSLEL 78
+P N C DC + GPT+ ++ +G +C C G R L RV+S+ +
Sbjct: 22 LPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNP-PHRVKSISM 69
>pdb|2D9L|A Chain A, Solution Structure Of The Arfgap Domain Of Human Rip
Length = 134
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 30 VPGNLTCADCAEAGPTWASLNLGLLLCIQCCGVHRCLGAHVSRVRSLEL 78
+P N C DC + GPT+ ++ +G +C C G R L RV+S+ +
Sbjct: 17 LPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNP-PHRVKSISM 64
>pdb|1T2B|A Chain A, Crystal Structure Of Cytochrome P450cin Complexed With Its
Substrate 1,8-Cineole
pdb|1T2B|B Chain B, Crystal Structure Of Cytochrome P450cin Complexed With Its
Substrate 1,8-Cineole
Length = 397
Score = 29.6 bits (65), Expect = 0.50, Method: Composition-based stats.
Identities = 10/15 (66%), Positives = 13/15 (86%)
Query: 61 GVHRCLGAHVSRVRS 75
G+HRCLGAH+ RV +
Sbjct: 336 GIHRCLGAHLIRVEA 350
Score = 29.3 bits (64), Expect = 0.66, Method: Composition-based stats.
Identities = 10/13 (76%), Positives = 12/13 (92%)
Query: 95 GVHRCLGAHVSRV 107
G+HRCLGAH+ RV
Sbjct: 336 GIHRCLGAHLIRV 348
>pdb|4FB2|A Chain A, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|B Chain B, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|C Chain C, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|D Chain D, Crystal Structure Of Substrate-Free P450cin
pdb|4FYZ|A Chain A, Crystal Structure Of Nitrosyl Cytochrome P450cin
pdb|4FYZ|B Chain B, Crystal Structure Of Nitrosyl Cytochrome P450cin
pdb|4FMX|A Chain A, Crystal Structure Of Substrate-Bound P450cin
pdb|4FMX|B Chain B, Crystal Structure Of Substrate-Bound P450cin
Length = 398
Score = 29.6 bits (65), Expect = 0.50, Method: Composition-based stats.
Identities = 10/15 (66%), Positives = 13/15 (86%)
Query: 61 GVHRCLGAHVSRVRS 75
G+HRCLGAH+ RV +
Sbjct: 337 GIHRCLGAHLIRVEA 351
Score = 29.3 bits (64), Expect = 0.66, Method: Composition-based stats.
Identities = 10/13 (76%), Positives = 12/13 (92%)
Query: 95 GVHRCLGAHVSRV 107
G+HRCLGAH+ RV
Sbjct: 337 GIHRCLGAHLIRV 349
>pdb|3BDZ|A Chain A, The Role Of Asn 242 In P450cin
pdb|3BDZ|B Chain B, The Role Of Asn 242 In P450cin
pdb|3BE0|A Chain A, The Role Of Asn 242 In P450cin
pdb|3BE0|B Chain B, The Role Of Asn 242 In P450cin
Length = 397
Score = 29.6 bits (65), Expect = 0.50, Method: Composition-based stats.
Identities = 10/15 (66%), Positives = 13/15 (86%)
Query: 61 GVHRCLGAHVSRVRS 75
G+HRCLGAH+ RV +
Sbjct: 336 GIHRCLGAHLIRVEA 350
Score = 29.3 bits (64), Expect = 0.66, Method: Composition-based stats.
Identities = 10/13 (76%), Positives = 12/13 (92%)
Query: 95 GVHRCLGAHVSRV 107
G+HRCLGAH+ RV
Sbjct: 336 GIHRCLGAHLIRV 348
>pdb|4DXY|A Chain A, Crystal Structures Of Cyp101d2 Y96a Mutant
Length = 417
Score = 26.9 bits (58), Expect = 3.1, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Query: 95 GVHRCLGAHVSRVRFL-ELDEW 115
G HRC G H++R+ + L+EW
Sbjct: 360 GPHRCAGMHLARMEVIVTLEEW 381
Score = 26.6 bits (57), Expect = 3.8, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Query: 61 GVHRCLGAHVSRVRSL-ELDEW 81
G HRC G H++R+ + L+EW
Sbjct: 360 GPHRCAGMHLARMEVIVTLEEW 381
>pdb|3NV5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101d2
pdb|3NV6|A Chain A, Crystal Structure Of Camphor-Bound Cyp101d2
Length = 452
Score = 26.9 bits (58), Expect = 3.1, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Query: 95 GVHRCLGAHVSRVRFL-ELDEW 115
G HRC G H++R+ + L+EW
Sbjct: 395 GPHRCAGMHLARMEVIVTLEEW 416
Score = 26.6 bits (57), Expect = 3.8, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Query: 61 GVHRCLGAHVSRVRSL-ELDEW 81
G HRC G H++R+ + L+EW
Sbjct: 395 GPHRCAGMHLARMEVIVTLEEW 416
>pdb|3LXH|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101d1
pdb|3LXH|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101d1
pdb|3LXI|A Chain A, Crystal Structure Of Camphor-Bound Cyp101d1
pdb|3LXI|B Chain B, Crystal Structure Of Camphor-Bound Cyp101d1
Length = 421
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Query: 61 GVHRCLGAHVSRVR-SLELDEW 81
G HRC G H++R+ ++ L EW
Sbjct: 361 GPHRCAGMHLARLEVTVMLQEW 382
>pdb|1N4N|A Chain A, Structure Of The Plant Defensin Phd1 From Petunia
Hybrida
Length = 47
Score = 25.4 bits (54), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 37 ADCAEAGPTWASLNLGLLLCIQCCGVHRCLGAHVSRV 73
A C PTW S+ + C+ CC + H S++
Sbjct: 1 ATCKAECPTWDSVCINKKPCVACCKKAKFSDGHCSKI 37
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.139 0.463
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,205,028
Number of Sequences: 62578
Number of extensions: 105165
Number of successful extensions: 363
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 319
Number of HSP's gapped (non-prelim): 48
length of query: 115
length of database: 14,973,337
effective HSP length: 78
effective length of query: 37
effective length of database: 10,092,253
effective search space: 373413361
effective search space used: 373413361
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 45 (21.9 bits)