Query psy6976
Match_columns 177
No_of_seqs 176 out of 727
Neff 7.0
Searched_HMMs 46136
Date Fri Aug 16 23:36:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6976.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6976hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3916|consensus 100.0 3.9E-65 8.5E-70 428.7 13.7 175 1-175 194-370 (372)
2 cd00899 b4GalT Beta-4-Galactos 100.0 8.2E-57 1.8E-61 364.1 16.9 172 1-172 45-219 (219)
3 KOG3917|consensus 100.0 1.9E-30 4.2E-35 209.0 6.7 156 3-162 119-282 (310)
4 PF02709 Glyco_transf_7C: N-te 99.9 7.2E-25 1.6E-29 151.6 5.7 78 49-126 1-78 (78)
5 PF10111 Glyco_tranf_2_2: Glyc 99.8 3.8E-20 8.1E-25 154.9 6.7 109 2-114 72-215 (281)
6 KOG3588|consensus 99.7 2.8E-17 6E-22 140.9 7.3 121 1-127 295-441 (494)
7 cd06420 GT2_Chondriotin_Pol_N 99.5 2.2E-14 4.7E-19 110.3 8.3 109 2-114 63-173 (182)
8 PF13733 Glyco_transf_7N: N-te 99.5 6.2E-15 1.3E-19 111.2 3.6 46 1-46 90-135 (136)
9 PF05679 CHGN: Chondroitin N-a 99.5 1.1E-13 2.5E-18 124.7 7.9 134 2-141 324-488 (499)
10 cd02510 pp-GalNAc-T pp-GalNAc- 99.4 1.6E-13 3.4E-18 115.0 6.8 108 3-114 68-218 (299)
11 cd04186 GT_2_like_c Subfamily 99.2 3.9E-11 8.5E-16 89.8 6.3 97 3-114 59-158 (166)
12 cd04184 GT2_RfbC_Mx_like Myxoc 99.0 4.2E-10 9.1E-15 87.7 6.3 107 5-117 70-197 (202)
13 cd02526 GT2_RfbF_like RfbF is 99.0 1.9E-09 4.1E-14 86.2 7.6 109 4-114 58-197 (237)
14 COG4092 Predicted glycosyltran 98.9 3E-10 6.6E-15 94.4 2.1 105 2-106 73-216 (346)
15 cd06437 CESA_CaSu_A2 Cellulose 98.9 1E-09 2.3E-14 88.0 4.7 102 6-114 75-206 (232)
16 cd04185 GT_2_like_b Subfamily 98.9 6.4E-09 1.4E-13 81.4 7.6 101 5-114 63-166 (202)
17 cd02522 GT_2_like_a GT_2_like_ 98.9 4.6E-09 9.9E-14 82.9 6.6 101 5-112 59-178 (221)
18 cd02520 Glucosylceramide_synth 98.9 1.4E-09 3.1E-14 85.4 3.6 94 6-114 74-170 (196)
19 cd04195 GT2_AmsE_like GT2_AmsE 98.8 9.1E-09 2E-13 80.2 5.3 106 5-117 67-197 (201)
20 TIGR01556 rhamnosyltran L-rham 98.8 1.4E-08 3.1E-13 84.1 6.7 107 6-114 58-194 (281)
21 cd06913 beta3GnTL1_like Beta 1 98.8 1.7E-08 3.7E-13 80.3 6.9 112 5-121 71-209 (219)
22 PF13641 Glyco_tranf_2_3: Glyc 98.7 4.4E-08 9.5E-13 77.9 8.5 103 5-114 73-203 (228)
23 cd02525 Succinoglycan_BP_ExoA 98.7 4.2E-08 9.1E-13 78.3 7.8 104 5-114 68-201 (249)
24 cd06435 CESA_NdvC_like NdvC_li 98.7 2.5E-08 5.4E-13 79.8 6.3 104 6-114 70-202 (236)
25 cd06427 CESA_like_2 CESA_like_ 98.7 4.2E-08 9E-13 79.5 5.8 104 4-114 70-205 (241)
26 TIGR03469 HonB hopene-associat 98.6 2.6E-08 5.7E-13 86.9 4.2 108 5-113 115-254 (384)
27 cd04192 GT_2_like_e Subfamily 98.6 1.1E-07 2.3E-12 75.0 7.3 102 5-112 69-200 (229)
28 cd06421 CESA_CelA_like CESA_Ce 98.6 1.1E-07 2.4E-12 75.4 7.3 102 6-114 72-204 (234)
29 PRK14583 hmsR N-glycosyltransf 98.6 1.2E-07 2.7E-12 84.1 7.7 103 5-114 142-274 (444)
30 cd06433 GT_2_WfgS_like WfgS an 98.6 2.6E-07 5.7E-12 70.9 7.6 106 4-115 61-188 (202)
31 PRK11204 N-glycosyltransferase 98.6 1.2E-07 2.7E-12 82.9 6.2 104 5-115 121-254 (420)
32 COG1216 Predicted glycosyltran 98.4 5.5E-07 1.2E-11 76.0 7.2 106 7-114 70-213 (305)
33 PRK11498 bcsA cellulose syntha 98.4 4.6E-07 1E-11 86.5 5.3 103 5-114 326-462 (852)
34 TIGR03472 HpnI hopanoid biosyn 98.3 8.9E-07 1.9E-11 76.9 5.4 104 6-114 114-246 (373)
35 cd00761 Glyco_tranf_GTA_type G 98.3 1.8E-06 3.9E-11 62.2 6.1 89 3-110 62-154 (156)
36 COG1215 Glycosyltransferases, 98.3 1.1E-06 2.3E-11 76.6 5.2 135 5-155 124-290 (439)
37 TIGR03030 CelA cellulose synth 98.3 1.7E-06 3.7E-11 81.4 6.7 103 5-114 215-351 (713)
38 cd06442 DPM1_like DPM1_like re 98.2 7.8E-06 1.7E-10 64.5 7.5 114 4-129 64-206 (224)
39 cd06434 GT2_HAS Hyaluronan syn 98.1 6.1E-06 1.3E-10 65.7 6.7 105 5-114 64-206 (235)
40 cd04191 Glucan_BSP_ModH Glucan 98.1 6.3E-06 1.4E-10 68.5 6.2 107 6-114 81-224 (254)
41 TIGR03111 glyc2_xrt_Gpos1 puta 98.1 5.9E-06 1.3E-10 73.4 6.1 103 5-114 118-260 (439)
42 cd06439 CESA_like_1 CESA_like_ 98.1 8.2E-06 1.8E-10 65.8 5.8 102 3-114 94-222 (251)
43 PRK10018 putative glycosyl tra 98.0 1.7E-05 3.7E-10 66.8 7.3 115 4-126 71-210 (279)
44 PRK10063 putative glycosyl tra 97.9 3.9E-05 8.4E-10 63.3 7.6 111 5-122 69-197 (248)
45 PRK14716 bacteriophage N4 adso 97.9 4.2E-05 9.1E-10 69.5 8.1 109 2-114 133-282 (504)
46 KOG3736|consensus 97.9 5.2E-06 1.1E-10 76.1 1.9 105 6-114 214-362 (578)
47 cd06423 CESA_like CESA_like is 97.7 5E-05 1.1E-09 55.9 3.7 84 4-91 64-178 (180)
48 PLN02726 dolichyl-phosphate be 97.6 3.4E-05 7.4E-10 62.6 2.8 105 4-114 79-211 (243)
49 cd04188 DPG_synthase DPG_synth 97.6 0.00022 4.8E-09 56.2 6.4 105 4-114 68-201 (211)
50 cd04179 DPM_DPG-synthase_like 97.5 6.5E-05 1.4E-09 57.3 2.6 91 4-102 65-184 (185)
51 PF13506 Glyco_transf_21: Glyc 97.5 8E-05 1.7E-09 58.5 2.9 93 21-114 30-147 (175)
52 cd04196 GT_2_like_d Subfamily 97.4 0.00032 6.9E-09 54.5 5.6 103 5-114 66-196 (214)
53 cd04187 DPM1_like_bac Bacteria 97.4 0.00018 4E-09 55.1 4.1 84 3-90 65-170 (181)
54 cd04190 Chitin_synth_C C-termi 97.4 0.0001 2.3E-09 60.1 2.7 100 9-112 64-211 (244)
55 cd06438 EpsO_like EpsO protein 97.4 0.00023 5E-09 55.0 4.2 37 4-40 62-99 (183)
56 KOG3737|consensus 97.4 0.00011 2.3E-09 64.8 2.3 49 66-114 332-380 (603)
57 PRK11234 nfrB bacteriophage N4 97.2 0.00081 1.8E-08 63.7 6.6 107 5-114 133-279 (727)
58 PF13632 Glyco_trans_2_3: Glyc 97.1 0.00085 1.9E-08 52.1 5.3 47 66-114 71-117 (193)
59 PRK05454 glucosyltransferase M 97.1 0.00029 6.3E-09 66.3 2.7 107 8-114 206-349 (691)
60 KOG3738|consensus 96.7 0.00042 9.1E-09 61.2 0.1 101 8-112 194-338 (559)
61 PRK10073 putative glycosyl tra 96.3 0.01 2.2E-07 50.9 6.3 110 5-121 72-216 (328)
62 PRK15489 nfrB bacteriophage N4 96.2 0.016 3.5E-07 54.8 7.5 106 3-112 139-285 (703)
63 cd06436 GlcNAc-1-P_transferase 96.1 0.013 2.8E-07 45.7 5.2 37 4-40 64-107 (191)
64 PF13712 Glyco_tranf_2_5: Glyc 95.6 0.014 3E-07 47.4 3.7 103 4-114 40-191 (217)
65 PF00535 Glycos_transf_2: Glyc 95.4 0.015 3.4E-07 42.4 3.1 33 4-40 64-96 (169)
66 PF13896 Glyco_transf_49: Glyc 93.9 0.036 7.7E-07 47.6 2.1 34 81-114 242-275 (317)
67 PF03214 RGP: Reversibly glyco 93.0 0.064 1.4E-06 46.4 2.2 33 3-39 76-108 (348)
68 cd02514 GT13_GLCNAC-TI GT13_GL 93.0 0.19 4.2E-06 43.6 5.1 95 9-114 88-202 (334)
69 PRK13915 putative glucosyl-3-p 91.9 0.1 2.2E-06 44.4 2.0 99 5-112 102-236 (306)
70 PRK10714 undecaprenyl phosphat 91.1 0.14 3.1E-06 43.8 2.2 34 2-39 74-107 (325)
71 cd02511 Beta4Glucosyltransfera 90.4 0.17 3.7E-06 40.5 1.9 32 5-40 58-89 (229)
72 PTZ00260 dolichyl-phosphate be 87.7 0.48 1E-05 40.8 2.9 103 4-114 148-285 (333)
73 PLN03180 reversibly glycosylat 86.4 0.33 7.1E-06 42.2 1.1 32 3-38 78-109 (346)
74 COG0463 WcaA Glycosyltransfera 83.7 0.89 1.9E-05 32.8 2.3 31 4-39 69-99 (291)
75 PLN02893 Cellulose synthase-li 80.4 7.8 0.00017 37.2 7.7 35 5-39 281-316 (734)
76 KOG3765|consensus 75.3 1.9 4E-05 38.3 1.9 30 7-40 180-209 (386)
77 PRK12465 xylose isomerase; Pro 43.1 21 0.00046 32.1 2.6 18 21-38 101-118 (445)
78 PLN02923 xylose isomerase 42.9 21 0.00044 32.4 2.5 20 20-39 134-153 (478)
79 PF00289 CPSase_L_chain: Carba 42.2 21 0.00046 25.7 2.2 32 83-114 73-106 (110)
80 PF08260 Kinin: Insect kinin p 39.7 16 0.00035 14.3 0.6 7 87-93 2-8 (8)
81 PF03452 Anp1: Anp1; InterPro 38.5 34 0.00073 28.9 3.1 32 7-39 128-159 (269)
82 TIGR02630 xylose_isom_A xylose 37.1 24 0.00051 31.8 2.0 18 21-38 90-107 (434)
83 cd02515 Glyco_transf_6 Glycosy 36.5 24 0.00052 29.9 1.9 20 21-40 122-141 (271)
84 PRK05474 xylose isomerase; Pro 36.0 29 0.00062 31.4 2.3 18 21-38 91-108 (437)
85 KOG2943|consensus 33.8 18 0.00038 30.4 0.6 34 70-103 40-83 (299)
86 KOG2978|consensus 33.5 32 0.00068 28.1 2.0 97 7-115 77-207 (238)
87 COG2115 XylA Xylose isomerase 32.6 41 0.00088 29.6 2.7 19 21-39 94-112 (438)
88 PF07312 DUF1459: Protein of u 29.0 20 0.00044 24.8 0.2 14 82-95 52-65 (84)
89 PF01501 Glyco_transf_8: Glyco 29.0 39 0.00084 26.4 1.9 19 21-39 97-115 (250)
90 PF03414 Glyco_transf_6: Glyco 28.0 32 0.00069 30.1 1.3 18 22-39 188-205 (337)
91 PF11735 CAP59_mtransfer: Cryp 27.7 55 0.0012 27.1 2.6 31 7-38 92-127 (241)
92 PF04724 Glyco_transf_17: Glyc 24.9 45 0.00097 29.3 1.7 26 21-46 177-204 (356)
93 PLN02195 cellulose synthase A 24.8 61 0.0013 32.3 2.6 33 6-38 437-469 (977)
94 PLN02189 cellulose synthase 24.6 64 0.0014 32.4 2.8 33 6-38 516-548 (1040)
95 KOG3987|consensus 24.2 1.3E+02 0.0028 25.1 4.0 24 68-96 87-113 (288)
No 1
>KOG3916|consensus
Probab=100.00 E-value=3.9e-65 Score=428.70 Aligned_cols=175 Identities=56% Similarity=1.062 Sum_probs=170.6
Q ss_pred CCCcchhhhhhHHHHHHHhcCCccEEEEEeccccccCCCceeccCCCceeeeeecccccccccccccccceeeeeHHHHh
Q psy6976 1 GHPFNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTCPGMPRHMSVAVDSMNYRLPYASLFGGVCALNKEHFQ 80 (177)
Q Consensus 1 ~~~Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~~~~~p~~~s~~~~~~~~~~~~~~~~Gg~~~~~~~~f~ 80 (177)
+++||||+++|+|+.+|.+++.|||+||||||++|++|+|+|.|+++|+|+++++++++|++||..+||||++++++||.
T Consensus 194 ~~~FNRakL~NVGf~eAlkd~~wdCfIFHDVDllPenDrNlY~C~~~PRH~sva~dk~gy~LPY~~~FGGVsalt~~qf~ 273 (372)
T KOG3916|consen 194 NKPFNRAKLLNVGFLEALKDYGWDCFIFHDVDLLPENDRNLYGCPEQPRHMSVALDKFGYRLPYKEYFGGVSALTKEQFR 273 (372)
T ss_pred CCcccHHHhhhhHHHHHHHhcCCCEEEEecccccccCCCCccCCCCCCcchhhhhhhccccccchhhhCchhhccHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCcccCCCCchHHHHHHHHcCCeEEecCCceeEEeeecCC--CCCCChHHHHHHHhcCceecccCCceeeEEEe
Q psy6976 81 LVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHR--KEKANPQRYEKLYSGHKRYKKDGLTSLKYKVI 158 (177)
Q Consensus 81 ~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~~~~~~~~~l~H~--~~~~n~~~~~~~~~~~~~~~~dGl~~~~y~~~ 158 (177)
+||||+|.|||||||||||+.|+..+|++|.||+..+|||+||+|. .+.+|+.||+++.+++.+|..||||++.|++.
T Consensus 274 kINGFsN~fWGWGGEDDDl~nRv~~ag~~IsRp~~~igrYkMikH~~k~n~~n~~Ry~lL~~tk~r~~~DGLnsl~Y~~~ 353 (372)
T KOG3916|consen 274 KINGFSNAFWGWGGEDDDLWNRVQLAGMKISRPPPEIGRYKMIKHHDKGNEPNPGRYKLLRNTKERQTQDGLNSLKYQLL 353 (372)
T ss_pred HhcCCCchhcccCCcchHHHHHHHhcCceeecCCCccceeEEeecccccCCCChHHHHHHHhhhhhhhhccccceeeeee
Confidence 9999999999999999999999999999999999999999999994 34599999999999999999999999999999
Q ss_pred EEEeeccEEEEEEEecC
Q psy6976 159 DTKQHKLFTWFLVQLGE 175 (177)
Q Consensus 159 ~~~~~~l~t~i~vd~~~ 175 (177)
+++.+||||||+||+++
T Consensus 354 ~v~~~pLyt~itVDl~~ 370 (372)
T KOG3916|consen 354 KVELDPLYTNITVDLGP 370 (372)
T ss_pred eeecccceEEEEEeccc
Confidence 99999999999999986
No 2
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=100.00 E-value=8.2e-57 Score=364.15 Aligned_cols=172 Identities=56% Similarity=1.022 Sum_probs=166.3
Q ss_pred CCCcchhhhhhHHHHHHHhcCCccEEEEEeccccccCCCceeccCCCceeeeeecccccccccccccccceeeeeHHHHh
Q psy6976 1 GHPFNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTCPGMPRHMSVAVDSMNYRLPYASLFGGVCALNKEHFQ 80 (177)
Q Consensus 1 ~~~Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~~~~~p~~~s~~~~~~~~~~~~~~~~Gg~~~~~~~~f~ 80 (177)
+.+||||+++|+|+.+|.+..++||+||||||++|+++++.|.|+.+|+|++++++++++++||..++||+++++|+||.
T Consensus 45 ~~~FNR~~llNvG~~~a~k~~~~dc~i~hDVDllP~~~~~~y~~~~~p~H~s~~~~~~~~~lpy~~~~Gg~~~~~k~~f~ 124 (219)
T cd00899 45 NFRFNRAKLLNVGFLEALKDGDWDCFIFHDVDLLPENDRNLYGCEEGPRHLSVPLDKFHYKLPYKTYFGGVLALTREQFR 124 (219)
T ss_pred CccchhhhhhhHHHHHHhhcCCccEEEEecccccccCccccccCCCCCeEEEEeecccccccCcccccccceeeEHHHHH
Confidence 35899999999999999998889999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCcccCCCCchHHHHHHHHcCCeEEecCCceeEEeeecCCCCC---CChHHHHHHHhcCceecccCCceeeEEE
Q psy6976 81 LVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEK---ANPQRYEKLYSGHKRYKKDGLTSLKYKV 157 (177)
Q Consensus 81 ~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~~~~~~~~~l~H~~~~---~n~~~~~~~~~~~~~~~~dGl~~~~y~~ 157 (177)
+||||||.|||||+||+||..||..+|+++.|++..+++|.||+|++++ .|+++++++..+++++|.|||+++.|+|
T Consensus 125 ~VNGf~n~f~GWGgEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H~~~~r~~~N~~r~~~l~~~~~~~~~dGLnsl~Y~v 204 (219)
T cd00899 125 KVNGFSNAYWGWGGEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIHDKRNRDNPNRFALLQNSRERDHSDGLNSLKYKV 204 (219)
T ss_pred HhCCcCCcCccCCcchHHHHHHHHHCCCeEEeccCcccceeeeecCCCcccccCHHHHHHHHhhCeEeccCCccceEEEE
Confidence 9999999999999999999999999999999999999999999998874 8999999999999999999999999999
Q ss_pred eEEEeeccEEEEEEE
Q psy6976 158 IDTKQHKLFTWFLVQ 172 (177)
Q Consensus 158 ~~~~~~~l~t~i~vd 172 (177)
++++..||||||+||
T Consensus 205 ~~~~~~pl~t~i~vd 219 (219)
T cd00899 205 LSIELAPLYTNILVD 219 (219)
T ss_pred EEEeccccEEEEEeC
Confidence 999999999999997
No 3
>KOG3917|consensus
Probab=99.96 E-value=1.9e-30 Score=208.97 Aligned_cols=156 Identities=36% Similarity=0.614 Sum_probs=130.9
Q ss_pred CcchhhhhhHHHHHHHhcCCccEEEEEeccccccCCCceeccCC--CceeeeeecccccccccccccccceeeeeHHHHh
Q psy6976 3 PFNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTCPG--MPRHMSVAVDSMNYRLPYASLFGGVCALNKEHFQ 80 (177)
Q Consensus 3 ~Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~~~~--~p~~~s~~~~~~~~~~~~~~~~Gg~~~~~~~~f~ 80 (177)
.||||.+.|+|+.+|.. -+|||++||||++|-++...|..+. +|.|++.. +++.+.+|..+.||++.+++++|.
T Consensus 119 RFNRAsLINVGf~eas~--~~DYiaMhDVDLLPlN~el~Y~fP~~~gp~HiasP--~lHPkYHY~~fvGGILll~~~hyk 194 (310)
T KOG3917|consen 119 RFNRASLINVGFNEASR--LCDYIAMHDVDLLPLNPELPYDFPGIGGPRHIASP--QLHPKYHYEKFVGGILLLTLKHYK 194 (310)
T ss_pred eechhhheecchhhhcc--hhceeeecccccccCCCCCCCCCCccCCcccccCc--ccCchhhhhhhcceeEEeeHHHHH
Confidence 59999999999999975 4799999999999999988888774 78888653 556666789999999999999999
Q ss_pred hhcCCCCCcccCCCCchHHHHHHHHcCCeEEecCCceeEE-eeecCCCCCCChHH-----HHHHHhcCceecccCCceee
Q psy6976 81 LVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKY-SMLRHRKEKANPQR-----YEKLYSGHKRYKKDGLTSLK 154 (177)
Q Consensus 81 ~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~~~~~~~-~~l~H~~~~~n~~~-----~~~~~~~~~~~~~dGl~~~~ 154 (177)
+.||++|.|||||.||+||+.|+..+|+.+.||+.....+ .++.|.+++...+| ..+.+..+++..+.||++++
T Consensus 195 ~~NGMSN~yWGWGlEDDEFy~RI~dagLqltRpsgi~Tg~~~TFrHiH~p~~RKRD~k~~~nQke~~rKrDh~~GL~~Vk 274 (310)
T KOG3917|consen 195 KLNGMSNKYWGWGLEDDEFYLRIIDAGLQLTRPSGISTGSSNTFRHIHGPKHRKRDKKNDKNQKEIKRKRDHVSGLHDVK 274 (310)
T ss_pred HhcCccccccccCcccchhhheeccccceEecccCcccCccchhhhhcChhhhhhhhhhhhhHHHHHhhhccccccccee
Confidence 9999999999999999999999999999999998544344 56888777632222 33444566778899999999
Q ss_pred EEEeEEEe
Q psy6976 155 YKVIDTKQ 162 (177)
Q Consensus 155 y~~~~~~~ 162 (177)
|.+.++++
T Consensus 275 Y~i~sr~~ 282 (310)
T KOG3917|consen 275 YLIDSRQL 282 (310)
T ss_pred eeeeeeee
Confidence 99998765
No 4
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=99.91 E-value=7.2e-25 Score=151.65 Aligned_cols=78 Identities=50% Similarity=1.112 Sum_probs=63.4
Q ss_pred eeeeeecccccccccccccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecCCceeEEeeecCC
Q psy6976 49 RHMSVAVDSMNYRLPYASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHR 126 (177)
Q Consensus 49 ~~~s~~~~~~~~~~~~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~~~~~~~~~l~H~ 126 (177)
+|++..++++.++.+|..++||+++++|++|.+||||||.|+|||+||+||..||..+|+++.+++...+.|.++.|+
T Consensus 1 rh~~~~~~~~~~~~~~~~~~Gg~~~~~~~~f~~vnGfde~f~gWG~ED~Dl~~Rl~~~g~~~~~~~~~~~~yh~~~H~ 78 (78)
T PF02709_consen 1 RHLSPSIDEFNYKYPYPNFFGGVFAISREDFEKVNGFDERFWGWGGEDDDLYNRLWKAGLKIVRVPGSIGRYHLWKHK 78 (78)
T ss_dssp EEEETEEGGGTSS-SSTT---SEEEEEHHHHHHTTSS-SS-TSCSSHHHHHHHHHHHTT---B-SSTTTTEEEEEET-
T ss_pred CCeeeccCcccCcCcCCCeeEEEEEEeHHHHHHcCCCCccccccCccHHHHHHHHHHcCCeEEecCCceEEEEEeecC
Confidence 588888888889999999999999999999999999999999999999999999999999999999889999888785
No 5
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.81 E-value=3.8e-20 Score=154.90 Aligned_cols=109 Identities=31% Similarity=0.500 Sum_probs=81.1
Q ss_pred CCcchhhhhhHHHHHHHhcCCccEEEEEeccccccCCCcee--c----cCCCceee--------eee----c-ccc----
Q psy6976 2 HPFNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLY--T----CPGMPRHM--------SVA----V-DSM---- 58 (177)
Q Consensus 2 ~~Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~--~----~~~~p~~~--------s~~----~-~~~---- 58 (177)
..|++|++||.|+..|++ |+|+|+|+||+|.++++.. . ....+..+ +.. + ...
T Consensus 72 ~~f~~a~arN~g~~~A~~----d~l~flD~D~i~~~~~i~~~~~~~~~l~~~~~~~~~~p~~yl~~~~~~~~~~~~~~~~ 147 (281)
T PF10111_consen 72 EPFSRAKARNIGAKYARG----DYLIFLDADCIPSPDFIEKLLNHVKKLDKNPNAFLVYPCLYLSEEGSEKFYSQFKNLW 147 (281)
T ss_pred CCcCHHHHHHHHHHHcCC----CEEEEEcCCeeeCHHHHHHHHHHHHHHhcCCCceEEEeeeeccchhhHHHhhcchhcc
Confidence 469999999999999998 9999999999999997421 1 11111111 000 0 000
Q ss_pred ---------ccc---ccccccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 59 ---------NYR---LPYASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 59 ---------~~~---~~~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
... ..+....|++++++|++|.+||||||+|.|||+||.||..||..+|..+.+++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~s~~~~i~r~~f~~iGGfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~ 215 (281)
T PF10111_consen 148 DHEFLESFISGKNSLWEFIAFASSCFLINREDFLEIGGFDERFRGWGYEDIDFGYRLKKAGYKFKRSP 215 (281)
T ss_pred hHHHHHHHhhccccccccccccceEEEEEHHHHHHhCCCCccccCCCcchHHHHHHHHHcCCcEecCh
Confidence 000 01234567999999999999999999999999999999999999999987654
No 6
>KOG3588|consensus
Probab=99.70 E-value=2.8e-17 Score=140.87 Aligned_cols=121 Identities=31% Similarity=0.441 Sum_probs=91.5
Q ss_pred CCCcchhhhhhHHHHHHHhcCCccEEEEEeccccccCCCceeccCC---------Cceeeeeec-------c-------c
Q psy6976 1 GHPFNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTCPG---------MPRHMSVAV-------D-------S 57 (177)
Q Consensus 1 ~~~Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~~~~---------~p~~~s~~~-------~-------~ 57 (177)
++.|+||+++-+|+..-.+ --.++|+|||+++..+| +-+|.. .|.-+|.-. + +
T Consensus 295 ngeFSRa~aL~vGAe~~~~---nvLLFfcDVDi~FT~ef-L~rcr~Nt~~gkqiyfPivFS~ynp~ivy~~~~~~p~e~~ 370 (494)
T KOG3588|consen 295 NGEFSRAKALMVGAETLNA---NVLLFFCDVDIYFTTEF-LNRCRLNTILGKQIYFPIVFSQYNPEIVYEQDKPLPAEQQ 370 (494)
T ss_pred cchhhhhHHHHhhHHHhcc---ceeEEEeccceeehHHH-HHHHhhccCCCceEEEEEEEeecCcceeecCCCCCchhHh
Confidence 3469999999999987644 15789999999999998 445542 233333110 0 0
Q ss_pred cc--cccccccccc-ceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecCCceeEEeeecCCC
Q psy6976 58 MN--YRLPYASLFG-GVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRK 127 (177)
Q Consensus 58 ~~--~~~~~~~~~G-g~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~~~~~~~~~l~H~~ 127 (177)
+. -...++.-|| |+.++.|+||.+|||||....|||+||.||+....++|+++.|.+ ..| ..++||+.
T Consensus 371 ~~~~~~tGfwRdfGfGmtc~yrsd~~~vgGFD~~I~GWG~EDV~Ly~K~v~~~l~viR~p-~pG-l~H~~H~~ 441 (494)
T KOG3588|consen 371 LVIKKDTGFWRDFGFGMTCQYRSDFLTVGGFDMEIKGWGGEDVDLYRKYVHSGLKVIRTP-EPG-LFHLWHPK 441 (494)
T ss_pred eeeccccccccccCCceeEEeeccceeecCcceeeeccCcchHHHHHHHHhcCcEEEecC-CCc-eEEeeccc
Confidence 11 1134567778 999999999999999999999999999999999999999999975 233 34699975
No 7
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.54 E-value=2.2e-14 Score=110.27 Aligned_cols=109 Identities=28% Similarity=0.402 Sum_probs=79.2
Q ss_pred CCcchhhhhhHHHHHHHhcCCccEEEEEeccccccCCCcee--ccCCCceeeeeecccccccccccccccceeeeeHHHH
Q psy6976 2 HPFNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLY--TCPGMPRHMSVAVDSMNYRLPYASLFGGVCALNKEHF 79 (177)
Q Consensus 2 ~~Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~--~~~~~p~~~s~~~~~~~~~~~~~~~~Gg~~~~~~~~f 79 (177)
.++.++.++|.|+..|.+ |+++|+|.|++|.++++.. ........+.................||.++++|+.|
T Consensus 63 ~~~~~~~~~n~g~~~a~g----~~i~~lD~D~~~~~~~l~~~~~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~r~~~ 138 (182)
T cd06420 63 EGFRKAKIRNKAIAAAKG----DYLIFIDGDCIPHPDFIADHIELAEPGVFLSGSRVLLNEKLTERGIRGCNMSFWKKDL 138 (182)
T ss_pred cchhHHHHHHHHHHHhcC----CEEEEEcCCcccCHHHHHHHHHHhCCCcEEecceeecccccceeEeccceEEEEHHHH
Confidence 357788999999999988 9999999999999986421 1111001111000000000111345689999999999
Q ss_pred hhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 80 QLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 80 ~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
.++|||++.|.+||+||.||..|+.++|++..+..
T Consensus 139 ~~~ggf~~~~~~~~~eD~~l~~r~~~~g~~~~~~~ 173 (182)
T cd06420 139 LAVNGFDEEFTGWGGEDSELVARLLNSGIKFRKLK 173 (182)
T ss_pred HHhCCCCcccccCCcchHHHHHHHHHcCCcEEEec
Confidence 99999999999999999999999999998887743
No 8
>PF13733 Glyco_transf_7N: N-terminal region of glycosyl transferase group 7; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=99.52 E-value=6.2e-15 Score=111.16 Aligned_cols=46 Identities=67% Similarity=1.261 Sum_probs=34.5
Q ss_pred CCCcchhhhhhHHHHHHHhcCCccEEEEEeccccccCCCceeccCC
Q psy6976 1 GHPFNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTCPG 46 (177)
Q Consensus 1 ~~~Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~~~~ 46 (177)
+.+||||+++|+|+.+|.+..+|||+||||||+||+++.+.|.|++
T Consensus 90 ~~~FNRg~L~NvGf~eA~~~~~~dc~ifHDVDllP~~~~n~Y~C~~ 135 (136)
T PF13733_consen 90 NGPFNRGKLMNVGFLEALKDDDFDCFIFHDVDLLPENDRNLYTCDE 135 (136)
T ss_dssp SS---HHHHHHHHHHHHHHHS--SEEEEE-TTEEESBTTS-SS---
T ss_pred CCCCchhhhhhHHHHHHhhccCCCEEEEecccccccCCCceeeCCC
Confidence 4689999999999999999889999999999999999999999975
No 9
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=99.46 E-value=1.1e-13 Score=124.72 Aligned_cols=134 Identities=24% Similarity=0.404 Sum_probs=96.5
Q ss_pred CCcchhhhhhHHHHHHHhcCCccEEEEEeccccccCCCceeccCC---------Cceeeeeecc------------cccc
Q psy6976 2 HPFNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTCPG---------MPRHMSVAVD------------SMNY 60 (177)
Q Consensus 2 ~~Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~~~~---------~p~~~s~~~~------------~~~~ 60 (177)
+.|+|+++++.|+.... .-+.++|+|||+....+| +.+|.. .|.+++.--. .+..
T Consensus 324 ~~fsr~~~Ld~g~~~~~---~d~L~f~~Dvd~~f~~~f-L~rcR~nti~g~qvy~PI~Fs~y~p~~~~~~~~~~~~~~~i 399 (499)
T PF05679_consen 324 GEFSRGAALDVGAKKFP---PDSLLFFCDVDMVFTSDF-LNRCRMNTIPGKQVYFPIVFSQYNPDIVYAGKPPEPDQFDI 399 (499)
T ss_pred CCccHHHHHHhhcccCC---CCcEEEEEeCCcccCHHH-HHHHHHhhhcCcEEEEeeeccccCCcccccCCCCccccCcc
Confidence 67999999999998443 348999999999999998 344432 3555542110 1111
Q ss_pred --ccccccccc-ceeeeeHHHHhhh--cCCCCCcccCCCCchHHHHHHHHcC--CeEEecCCceeEEeeecCCCCC---C
Q psy6976 61 --RLPYASLFG-GVCALNKEHFQLV--NGFSNEYWGWGGEDDDMSNRVKAAG--LQIIRYPPDIAKYSMLRHRKEK---A 130 (177)
Q Consensus 61 --~~~~~~~~G-g~~~~~~~~f~~v--nGfde~f~GWG~ED~dl~~Rl~~~G--~~i~r~~~~~~~~~~l~H~~~~---~ 130 (177)
...++..+| |++|++++||.++ +||++...|||+||.||+.++.++| +++.|.... ...++||.... -
T Consensus 400 ~~~~G~w~~~gfg~~~~YksDy~~~~~~~~~~~~~gwg~ED~~l~~~~l~~~~~l~V~Ra~ep--~L~h~yh~~~C~~~l 477 (499)
T PF05679_consen 400 SKDTGFWRRFGFGMVCFYKSDYMRIRGGGFDLSIRGWGGEDVDLYDKFLKSGHKLHVFRAVEP--GLVHRYHPKHCDPSL 477 (499)
T ss_pred CCCCCccccCCCceEEEEhhhhhhhcccccccccccccccHHHHHHHHHhCCCceEEEEccCC--CeEEEecccCCCCCC
Confidence 123455666 9999999999999 9999999999999999999999999 999996421 13457777654 3
Q ss_pred ChHHHHHHHhc
Q psy6976 131 NPQRYEKLYSG 141 (177)
Q Consensus 131 n~~~~~~~~~~ 141 (177)
.++.++....+
T Consensus 478 ~~~qy~~C~~s 488 (499)
T PF05679_consen 478 SEEQYKMCLGS 488 (499)
T ss_pred CHHHHHHHHhh
Confidence 34455544433
No 10
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.44 E-value=1.6e-13 Score=115.02 Aligned_cols=108 Identities=21% Similarity=0.254 Sum_probs=77.7
Q ss_pred CcchhhhhhHHHHHHHhcCCccEEEEEeccccccCCCcee------------ccCC----Cceeee---------eecc-
Q psy6976 3 PFNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLY------------TCPG----MPRHMS---------VAVD- 56 (177)
Q Consensus 3 ~Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~------------~~~~----~p~~~s---------~~~~- 56 (177)
.+..+.++|.|++.|++ ||++|+|.|+++.++++.. .++. .+..+. ....
T Consensus 68 n~G~~~a~N~g~~~A~g----d~i~fLD~D~~~~~~wL~~ll~~l~~~~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (299)
T cd02510 68 REGLIRARIAGARAATG----DVLVFLDSHCEVNVGWLEPLLARIAENRKTVVCPIIDVIDADTFEYRGSSGDARGGFDW 143 (299)
T ss_pred CCCHHHHHHHHHHHccC----CEEEEEeCCcccCccHHHHHHHHHHhCCCeEEEeeeccccCCCeeEecCCCceeEEecc
Confidence 45678999999999988 9999999999998886310 1110 000000 0000
Q ss_pred ----ccc-c------------cccccccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 57 ----SMN-Y------------RLPYASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 57 ----~~~-~------------~~~~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
.+. . ........|++++++|+.|.++|||||.|..||+||.||..|+..+|.++...+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~vGgfDe~~~~~~~ED~Dl~~R~~~~G~~i~~~p 218 (299)
T cd02510 144 SLHFKWLPLPEEERRRESPTAPIRSPTMAGGLFAIDREWFLELGGYDEGMDIWGGENLELSFKVWQCGGSIEIVP 218 (299)
T ss_pred cceeccccCCHHHhhhcCCCCCccCccccceeeEEEHHHHHHhCCCCCcccccCchhHHHHHHHHHcCCeEEEee
Confidence 000 0 001123458999999999999999999999999999999999999999987754
No 11
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.19 E-value=3.9e-11 Score=89.79 Aligned_cols=97 Identities=24% Similarity=0.289 Sum_probs=75.6
Q ss_pred CcchhhhhhHHHHHHHhcCCccEEEEEeccccccCCCceeccC---CCceeeeeecccccccccccccccceeeeeHHHH
Q psy6976 3 PFNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTCP---GMPRHMSVAVDSMNYRLPYASLFGGVCALNKEHF 79 (177)
Q Consensus 3 ~Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~~~---~~p~~~s~~~~~~~~~~~~~~~~Gg~~~~~~~~f 79 (177)
....+.++|.|+..|.+ |+++|+|.|+++.+++...... ..|...... ....|+.++++++.|
T Consensus 59 ~~g~~~a~n~~~~~~~~----~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 124 (166)
T cd04186 59 NLGFGAGNNQGIREAKG----DYVLLLNPDTVVEPGALLELLDAAEQDPDVGIVG----------PKVSGAFLLVRREVF 124 (166)
T ss_pred CcChHHHhhHHHhhCCC----CEEEEECCCcEECccHHHHHHHHHHhCCCceEEE----------ccCceeeEeeeHHHH
Confidence 45688999999998866 9999999999999986322111 122211110 017789999999999
Q ss_pred hhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 80 QLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 80 ~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
.+++||++.|.. ++||.||..|+...|+++...+
T Consensus 125 ~~~~~~~~~~~~-~~eD~~~~~~~~~~g~~i~~~~ 158 (166)
T cd04186 125 EEVGGFDEDFFL-YYEDVDLCLRARLAGYRVLYVP 158 (166)
T ss_pred HHcCCCChhhhc-cccHHHHHHHHHHcCCeEEEcc
Confidence 999999999877 7799999999999999998754
No 12
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.04 E-value=4.2e-10 Score=87.69 Aligned_cols=107 Identities=15% Similarity=0.139 Sum_probs=73.3
Q ss_pred chhhhhhHHHHHHHhcCCccEEEEEeccccccCCCcee------ccCC------Cceeee--eeccccccccc-------
Q psy6976 5 NRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLY------TCPG------MPRHMS--VAVDSMNYRLP------- 63 (177)
Q Consensus 5 nra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~------~~~~------~p~~~s--~~~~~~~~~~~------- 63 (177)
..+.++|.|++.|.+ |+++|+|.|++++++++.. .... .+.... .......+..+
T Consensus 70 g~~~a~n~g~~~a~~----d~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (202)
T cd04184 70 GISAATNSALELATG----EFVALLDHDDELAPHALYEVVKALNEHPDADLIYSDEDKIDEGGKRSEPFFKPDWSPDLLL 145 (202)
T ss_pred CHHHHHHHHHHhhcC----CEEEEECCCCcCChHHHHHHHHHHHhCCCCCEEEccHHhccCCCCEeccccCCCCCHHHhh
Confidence 467889999999887 9999999999999986311 1111 000000 00000000101
Q ss_pred ccccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecCCce
Q psy6976 64 YASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDI 117 (177)
Q Consensus 64 ~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~~~~ 117 (177)
.....++.++++|+.|.++||||+.|. ++||.||..|+..+|.++...+...
T Consensus 146 ~~~~~~~~~~~~r~~~~~iggf~~~~~--~~eD~~l~~rl~~~g~~~~~~~~~~ 197 (202)
T cd04184 146 SQNYIGHLLVYRRSLVRQVGGFREGFE--GAQDYDLVLRVSEHTDRIAHIPRVL 197 (202)
T ss_pred hcCCccceEeEEHHHHHHhCCCCcCcc--cchhHHHHHHHHhccceEEEccHhh
Confidence 123456777899999999999999986 7899999999999999988866433
No 13
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=98.97 E-value=1.9e-09 Score=86.16 Aligned_cols=109 Identities=21% Similarity=0.291 Sum_probs=75.2
Q ss_pred cchhhhhhHHHHHHHhcCCccEEEEEeccccccCCCceec-----cC-C-------Cceeeeee-------cccccc---
Q psy6976 4 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYT-----CP-G-------MPRHMSVA-------VDSMNY--- 60 (177)
Q Consensus 4 Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~-----~~-~-------~p~~~s~~-------~~~~~~--- 60 (177)
..++.++|.|+..|.+. ++||++|+|.|+++.++++... +. . .|...... .....+
T Consensus 58 ~G~~~a~N~g~~~a~~~-~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (237)
T cd02526 58 LGIAKALNIGIKAALEN-GADYVLLFDQDSVPPPDMVEKLLAYKILSDKNSNIGAVGPRIIDRRTGENSPGVRKSGYKLR 136 (237)
T ss_pred eehHHhhhHHHHHHHhC-CCCEEEEECCCCCcCHhHHHHHHHHHHhhccCCCeEEEeeeEEcCCCCeeccceeccCccce
Confidence 45889999999999863 6799999999999999874221 11 1 11111000 000000
Q ss_pred ------c--ccccccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 61 ------R--LPYASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 61 ------~--~~~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
. .+.....++.++++|+.|.++||||+.+. .++||.||..|+..+|.++...+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~ggfd~~~~-~~~eD~d~~~r~~~~G~~~~~~~ 197 (237)
T cd02526 137 IQKEGEEGLKEVDFLITSGSLISLEALEKVGGFDEDLF-IDYVDTEWCLRARSKGYKIYVVP 197 (237)
T ss_pred ecccccCCceEeeeeeccceEEcHHHHHHhCCCCHHHc-CccchHHHHHHHHHcCCcEEEEc
Confidence 0 01122345667899999999999999975 57899999999999999987754
No 14
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=98.94 E-value=3e-10 Score=94.40 Aligned_cols=105 Identities=23% Similarity=0.360 Sum_probs=70.8
Q ss_pred CCcch-hhhhhHHHHHHHhcCCccEEEEEeccccccCC-Cceec----c----------CCCce-eeeeec--------c
Q psy6976 2 HPFNR-ASLFNVGYAEAIKIREFDCFIFHDVDLIPEDD-RNLYT----C----------PGMPR-HMSVAV--------D 56 (177)
Q Consensus 2 ~~Fnr-a~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~-~~~~~----~----------~~~p~-~~s~~~--------~ 56 (177)
++|.- ++++|.|+..|...-+-++++|+||||..+.| |.... . .-.|. |+.-+. +
T Consensus 73 ~~F~s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S~dnF~k~l~~~~ikk~~tnI~a~~vlPV~~LNk~~~~v~f~~~d 152 (346)
T COG4092 73 EPFASETICANNGADYSHEKCESNLVLFLDVDCFGSSDNFAKMLSIATIKKMRTNIDAPLVLPVYHLNKADTQVFFDVED 152 (346)
T ss_pred ccccchhhhhhccchhhhccccccEEEEEeccccccHHHHHHHHHHHHHHHHHhccCcceeeeeeecchhhhhHHHHHHH
Confidence 45665 99999999999854445999999999999844 42110 0 00222 221100 0
Q ss_pred cc-c----------cc---ccccccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHc
Q psy6976 57 SM-N----------YR---LPYASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAA 106 (177)
Q Consensus 57 ~~-~----------~~---~~~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~ 106 (177)
.+ + .+ .-+.....+...+.+..|.+.|||||+|.|.|.||.||..|+..+
T Consensus 153 ~f~d~~i~es~~~~~~~~~~ff~~~~T~~~liN~~~F~~tgGydE~F~GhG~EDfe~~~R~~l~ 216 (346)
T COG4092 153 MFLDAMIFESPLAEFRKEDNFFIAPYTNIFLINRRMFSLTGGYDERFRGHGSEDFEFLTRLGLY 216 (346)
T ss_pred HhhhhHhhhhHHHHhCcccccccccccceEEEehhHHHHhcCCccccccCCchhHHHHHHHHHH
Confidence 00 0 00 001224468889999999999999999999999999999998764
No 15
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=98.93 E-value=1e-09 Score=88.01 Aligned_cols=102 Identities=22% Similarity=0.318 Sum_probs=69.2
Q ss_pred hhhhhhHHHHHHHhcCCccEEEEEeccccccCCCceec--cCCCce---------eee------eeccccc----cc---
Q psy6976 6 RASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYT--CPGMPR---------HMS------VAVDSMN----YR--- 61 (177)
Q Consensus 6 ra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~--~~~~p~---------~~s------~~~~~~~----~~--- 61 (177)
++.++|.|+..|.+ |||+|+|.|+++.++++... ....|. ... .....+. +.
T Consensus 75 k~~a~n~g~~~a~~----~~i~~~DaD~~~~~~~l~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (232)
T cd06437 75 KAGALAEGMKVAKG----EYVAIFDADFVPPPDFLQKTPPYFADPKLGFVQTRWGHINANYSLLTRVQAMSLDYHFTIEQ 150 (232)
T ss_pred chHHHHHHHHhCCC----CEEEEEcCCCCCChHHHHHhhhhhcCCCeEEEecceeeEcCCCchhhHhhhhhHHhhhhHhH
Confidence 67789999999877 99999999999999964210 000110 000 0000000 00
Q ss_pred -----c-cccccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 62 -----L-PYASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 62 -----~-~~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
. ....+.|+.++++|+.|.++|||++.. ..||.||..|+..+|+++...+
T Consensus 151 ~~~~~~~~~~~~~g~~~~~rr~~~~~vgg~~~~~---~~ED~~l~~rl~~~G~~~~~~~ 206 (232)
T cd06437 151 VARSSTGLFFNFNGTAGVWRKECIEDAGGWNHDT---LTEDLDLSYRAQLKGWKFVYLD 206 (232)
T ss_pred hhHhhcCCeEEeccchhhhhHHHHHHhCCCCCCc---chhhHHHHHHHHHCCCeEEEec
Confidence 0 011235666778999999999999875 3699999999999999988754
No 16
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.88 E-value=6.4e-09 Score=81.39 Aligned_cols=101 Identities=19% Similarity=0.205 Sum_probs=71.1
Q ss_pred chhhhhhHHHHHHHhcCCccEEEEEeccccccCCCceecc--CCCce-eeeeecccccccccccccccceeeeeHHHHhh
Q psy6976 5 NRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTC--PGMPR-HMSVAVDSMNYRLPYASLFGGVCALNKEHFQL 81 (177)
Q Consensus 5 nra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~~--~~~p~-~~s~~~~~~~~~~~~~~~~Gg~~~~~~~~f~~ 81 (177)
..+.++|.|+..|. ...+|+++|+|.|+++.+++....+ ...|. .+... ..+.. .. .++.+.++|+.|.+
T Consensus 63 g~~~~~n~~~~~a~-~~~~d~v~~ld~D~~~~~~~l~~l~~~~~~~~~~~~~~-~~~~~----~~-~~~~~~~~~~~~~~ 135 (202)
T cd04185 63 GGAGGFYEGVRRAY-ELGYDWIWLMDDDAIPDPDALEKLLAYADKDNPQFLAP-LVLDP----DG-SFVGVLISRRVVEK 135 (202)
T ss_pred chhhHHHHHHHHHh-ccCCCEEEEeCCCCCcChHHHHHHHHHHhcCCceEecc-eeEcC----CC-ceEEEEEeHHHHHH
Confidence 45678899999887 4567999999999999998742111 11111 11100 00100 11 33556799999999
Q ss_pred hcCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 82 VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 82 vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
++||++.|..|| ||.||..|+..+|.++ ..+
T Consensus 136 ~g~~~~~~~~~~-eD~~~~~r~~~~G~~i-~~~ 166 (202)
T cd04185 136 IGLPDKEFFIWG-DDTEYTLRASKAGPGI-YVP 166 (202)
T ss_pred hCCCChhhhccc-hHHHHHHHHHHcCCcE-Eec
Confidence 999999988777 9999999999999999 533
No 17
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.88 E-value=4.6e-09 Score=82.92 Aligned_cols=101 Identities=21% Similarity=0.172 Sum_probs=68.9
Q ss_pred chhhhhhHHHHHHHhcCCccEEEEEeccccccCCCceec--cC-CCceeeee---ecc---------cc----ccccccc
Q psy6976 5 NRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYT--CP-GMPRHMSV---AVD---------SM----NYRLPYA 65 (177)
Q Consensus 5 nra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~--~~-~~p~~~s~---~~~---------~~----~~~~~~~ 65 (177)
++|.++|.|+..|.+ ++++|+|.|+++.+++.... .. ..+..... ... .. .......
T Consensus 59 g~~~a~n~g~~~a~~----~~i~~~D~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (221)
T cd02522 59 GRARQMNAGAAAARG----DWLLFLHADTRLPPDWDAAIIETLRADGAVAGAFRLRFDDPGPRLRLLELGANLRSRLFGL 134 (221)
T ss_pred CHHHHHHHHHHhccC----CEEEEEcCCCCCChhHHHHHHHHhhcCCcEEEEEEeeecCCccchhhhhhcccceecccCC
Confidence 578899999999987 99999999999998864211 10 00000000 000 00 0000001
Q ss_pred ccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEe
Q psy6976 66 SLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIR 112 (177)
Q Consensus 66 ~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r 112 (177)
.+-++.++++++.|.++||||+.+ ++||.||..|+..+|.++.-
T Consensus 135 ~~~~~~~~~r~~~~~~~G~fd~~~---~~ED~d~~~r~~~~G~~~~~ 178 (221)
T cd02522 135 PYGDQGLFIRRELFEELGGFPELP---LMEDVELVRRLRRRGRPALL 178 (221)
T ss_pred CcCCceEEEEHHHHHHhCCCCccc---cccHHHHHHHHHhCCCEEEc
Confidence 122356889999999999999998 77999999999999998865
No 18
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=98.87 E-value=1.4e-09 Score=85.43 Aligned_cols=94 Identities=21% Similarity=0.302 Sum_probs=70.0
Q ss_pred hhhhhhHHHHHHHhcCCccEEEEEeccccccCCCceeccC--CCce-eeeeecccccccccccccccceeeeeHHHHhhh
Q psy6976 6 RASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTCP--GMPR-HMSVAVDSMNYRLPYASLFGGVCALNKEHFQLV 82 (177)
Q Consensus 6 ra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~~~--~~p~-~~s~~~~~~~~~~~~~~~~Gg~~~~~~~~f~~v 82 (177)
++.++|.|+..|.+ |+++|+|.|+++.++++..... ..|. -+... ....|+.++++|+.|.++
T Consensus 74 ~~~~~n~g~~~a~~----d~i~~~D~D~~~~~~~l~~l~~~~~~~~~~~v~~----------~~~~g~~~~~r~~~~~~~ 139 (196)
T cd02520 74 KVNNLIKGYEEARY----DILVISDSDISVPPDYLRRMVAPLMDPGVGLVTC----------LCAFGKSMALRREVLDAI 139 (196)
T ss_pred hHHHHHHHHHhCCC----CEEEEECCCceEChhHHHHHHHHhhCCCCCeEEe----------ecccCceeeeEHHHHHhc
Confidence 55678999998887 9999999999999887422111 1111 01000 046689999999999999
Q ss_pred cCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 83 NGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 83 nGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
|||++ +.....||.||..|+..+|.++.-.+
T Consensus 140 ggf~~-~~~~~~eD~~l~~rl~~~G~~i~~~~ 170 (196)
T cd02520 140 GGFEA-FADYLAEDYFLGKLIWRLGYRVVLSP 170 (196)
T ss_pred cChHH-HhHHHHHHHHHHHHHHHcCCeEEEcc
Confidence 99976 33445799999999999999997654
No 19
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=98.78 E-value=9.1e-09 Score=80.18 Aligned_cols=106 Identities=17% Similarity=0.116 Sum_probs=71.9
Q ss_pred chhhhhhHHHHHHHhcCCccEEEEEeccccccCCCceeccC---CCc-e----------------eeeeeccc-----cc
Q psy6976 5 NRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTCP---GMP-R----------------HMSVAVDS-----MN 59 (177)
Q Consensus 5 nra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~~~---~~p-~----------------~~s~~~~~-----~~ 59 (177)
..+.++|.|+..|.+ |+++|+|.|.++.++++..... ..| . +....... ..
T Consensus 67 G~~~a~N~g~~~a~g----d~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (201)
T cd04195 67 GLGKALNEGLKHCTY----DWVARMDTDDISLPDRFEKQLDFIEKNPEIDIVGGGVLEFDSDGNDIGKRRLPTSHDDILK 142 (201)
T ss_pred cHHHHHHHHHHhcCC----CEEEEeCCccccCcHHHHHHHHHHHhCCCeEEEcccEEEECCCCCeeccccCCCCHHHHHH
Confidence 457889999999887 9999999999999986321100 001 0 00000000 00
Q ss_pred ccccccccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecCCce
Q psy6976 60 YRLPYASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDI 117 (177)
Q Consensus 60 ~~~~~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~~~~ 117 (177)
+......+.++.++++|+.+.+++||++. .++||.+|+.|+..+|.++...+...
T Consensus 143 ~~~~~~~~~~~~~~~rr~~~~~~g~~~~~---~~~eD~~~~~r~~~~g~~~~~~~~~~ 197 (201)
T cd04195 143 FARRRSPFNHPTVMFRKSKVLAVGGYQDL---PLVEDYALWARMLANGARFANLPEIL 197 (201)
T ss_pred HhccCCCCCChHHhhhHHHHHHcCCcCCC---CCchHHHHHHHHHHcCCceecccHHH
Confidence 10112233467789999999999999976 68999999999999999987765433
No 20
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=98.78 E-value=1.4e-08 Score=84.08 Aligned_cols=107 Identities=20% Similarity=0.255 Sum_probs=70.6
Q ss_pred hhhhhhHHHHHHHhcCCccEEEEEeccccccCCCcee--cc----C-C----Cceeeee---------ecccc-----c-
Q psy6976 6 RASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLY--TC----P-G----MPRHMSV---------AVDSM-----N- 59 (177)
Q Consensus 6 ra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~--~~----~-~----~p~~~s~---------~~~~~-----~- 59 (177)
-|.++|.|++.|.+ .++|+++|+|.|.+|.++.+.. .+ + . .|+.+.. ....+ .
T Consensus 58 ~a~a~N~Gi~~a~~-~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (281)
T TIGR01556 58 IAGAQNQGLDASFR-RGVQGVLLLDQDSRPGNAFLAAQWKLLSAENGQACALGPRFFDRGTSRRLPAIHLDGLLLRQISL 136 (281)
T ss_pred hHHHHHHHHHHHHH-CCCCEEEEECCCCCCCHHHHHHHHHHHHhcCCceEEECCeEEcCCCcccCCceeecccceeeecc
Confidence 46899999999864 3569999999999999886321 00 0 0 1221100 00000 0
Q ss_pred --ccccc--cccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 60 --YRLPY--ASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 60 --~~~~~--~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
...+. ....++.+.++++.|.+||||||.|..|+ ||.|+..|+.++|.++...+
T Consensus 137 ~~~~~~~~~~~~~~sg~li~~~~~~~iG~fde~~fi~~-~D~e~~~R~~~~G~~i~~~~ 194 (281)
T TIGR01556 137 DGLTTPQKTSFLISSGCLITREVYQRLGMMDEELFIDH-VDTEWSLRAQNYGIPLYIDP 194 (281)
T ss_pred cccCCceeccEEEcCcceeeHHHHHHhCCccHhhcccc-hHHHHHHHHHHCCCEEEEeC
Confidence 00000 11122234699999999999999987764 99999999999999988755
No 21
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=98.78 E-value=1.7e-08 Score=80.29 Aligned_cols=112 Identities=17% Similarity=0.080 Sum_probs=72.6
Q ss_pred chhhhhhHHHHHHHhcCCccEEEEEeccccccCCCcee---ccCCCceee-eeec--------cc---cccccc------
Q psy6976 5 NRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLY---TCPGMPRHM-SVAV--------DS---MNYRLP------ 63 (177)
Q Consensus 5 nra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~---~~~~~p~~~-s~~~--------~~---~~~~~~------ 63 (177)
..+.++|.|++.|.+ |+++|+|.|.++.++.+.. .+...|..+ .... .. +...+.
T Consensus 71 G~~~a~N~g~~~a~g----d~i~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (219)
T cd06913 71 GVGYAKNQAIAQSSG----RYLCFLDSDDVMMPQRIRLQYEAALQHPNSIIGCQVRRIPEDSTERYTRWINTLTREQLLT 146 (219)
T ss_pred cHHHHHHHHHHhcCC----CEEEEECCCccCChhHHHHHHHHHHhCCCcEEEEEEEecCcccchhhHHHHHhcCHHHHHH
Confidence 356789999999888 9999999999988885321 111111111 0000 00 000000
Q ss_pred ------ccccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecCCceeEEe
Q psy6976 64 ------YASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYS 121 (177)
Q Consensus 64 ------~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~~~~~~~~ 121 (177)
........+.++|+.|.++|||++.+.+++ ||.||+.|+..+|.++...+.....|.
T Consensus 147 ~~~~~~~~~~~~~~~~~rr~~~~~~g~f~~~~~~~~-eD~~l~~r~~~~g~~i~~~~~~~~~yr 209 (219)
T cd06913 147 QVYTSHGPTVIMPTWFCSREWFSHVGPFDEGGKGVP-EDLLFFYEHLRKGGGVYRVDRCLLLYR 209 (219)
T ss_pred HHHhhcCCccccccceeehhHHhhcCCccchhccch-hHHHHHHHHHHcCCceEEEcceeeeee
Confidence 001111224589999999999999876554 999999999999999988876555554
No 22
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=98.75 E-value=4.4e-08 Score=77.88 Aligned_cols=103 Identities=26% Similarity=0.285 Sum_probs=59.1
Q ss_pred chhhhhhHHHHHHHhcCCccEEEEEeccccccCCCcee---cc-CCC------------ceeeeeecccc----------
Q psy6976 5 NRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLY---TC-PGM------------PRHMSVAVDSM---------- 58 (177)
Q Consensus 5 nra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~---~~-~~~------------p~~~s~~~~~~---------- 58 (177)
.|+.++|.|++.+.. |+++|+|.|++++++++.. .+ .+. ...........
T Consensus 73 ~k~~a~n~~~~~~~~----d~i~~lD~D~~~~p~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (228)
T PF13641_consen 73 GKARALNEALAAARG----DYILFLDDDTVLDPDWLERLLAAFADPGVGAVGGPVFPDNDRNWLTRLQDLFFARWHLRFR 148 (228)
T ss_dssp HHHHHHHHHHHH-------SEEEEE-SSEEE-CHHHHHHHHHHHBSS--EEEEEEEETTCCCEEEE-TT--S-EETTTS-
T ss_pred hHHHHHHHHHHhcCC----CEEEEECCCcEECHHHHHHHHHHHHhCCCCeEeeeEeecCCCCHHHHHHHHHHhhhhhhhh
Confidence 367888999998876 9999999999999986421 11 110 01110000000
Q ss_pred --cccccccccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 59 --NYRLPYASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 59 --~~~~~~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
..........|++++++++.|.++||||+ ...+||.||..|+..+|+++...+
T Consensus 149 ~~~~~~~~~~~~G~~~~~rr~~~~~~g~fd~---~~~~eD~~l~~r~~~~G~~~~~~~ 203 (228)
T PF13641_consen 149 SGRRALGVAFLSGSGMLFRRSALEEVGGFDP---FILGEDFDLCLRLRAAGWRIVYAP 203 (228)
T ss_dssp TT-B----S-B--TEEEEEHHHHHHH-S--S---SSSSHHHHHHHHHHHTT--EEEEE
T ss_pred hhhcccceeeccCcEEEEEHHHHHHhCCCCC---CCcccHHHHHHHHHHCCCcEEEEC
Confidence 00011123468999999999999999999 234599999999999999998843
No 23
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=98.73 E-value=4.2e-08 Score=78.34 Aligned_cols=104 Identities=23% Similarity=0.223 Sum_probs=72.5
Q ss_pred chhhhhhHHHHHHHhcCCccEEEEEeccccccCCCceecc---CC-------Cceeeee----------ecc-ccc----
Q psy6976 5 NRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTC---PG-------MPRHMSV----------AVD-SMN---- 59 (177)
Q Consensus 5 nra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~~---~~-------~p~~~s~----------~~~-~~~---- 59 (177)
..+.++|.|+..|.+ |+++|+|.|+++.++++...+ .. .+..... ... .+.
T Consensus 68 ~~~~a~N~g~~~a~~----d~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (249)
T cd02525 68 IQSAGLNIGIRNSRG----DIIIRVDAHAVYPKDYILELVEALKRTGADNVGGPMETIGESKFQKAIAVAQSSPLGSGGS 143 (249)
T ss_pred CchHHHHHHHHHhCC----CEEEEECCCccCCHHHHHHHHHHHhcCCCCEEecceecCCCChHHHHHHHHhhchhccCCc
Confidence 467899999999876 999999999999988632111 00 0000000 000 000
Q ss_pred -cccc----ccccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 60 -YRLP----YASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 60 -~~~~----~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
+... .....|+.++++++.|.+++||++.|. .+||.||..|+..+|.++...+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~eD~~l~~r~~~~G~~~~~~~ 201 (249)
T cd02525 144 AYRGGAVKIGYVDTVHHGAYRREVFEKVGGFDESLV--RNEDAELNYRLRKAGYKIWLSP 201 (249)
T ss_pred cccccccccccccccccceEEHHHHHHhCCCCcccC--ccchhHHHHHHHHcCcEEEEcC
Confidence 0111 123467888999999999999999986 4799999999999999998765
No 24
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=98.72 E-value=2.5e-08 Score=79.84 Aligned_cols=104 Identities=17% Similarity=0.217 Sum_probs=70.3
Q ss_pred hhhhhhHHHHHHHhcCCccEEEEEeccccccCCCceecc--CCCcee--eee------e----cc---cccc------cc
Q psy6976 6 RASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTC--PGMPRH--MSV------A----VD---SMNY------RL 62 (177)
Q Consensus 6 ra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~~--~~~p~~--~s~------~----~~---~~~~------~~ 62 (177)
++.++|.|+..|.+ .+||++|+|.|++++++.+.... ...|.. +.. . .. .+.+ ..
T Consensus 70 ~~~a~n~g~~~a~~--~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (236)
T cd06435 70 KAGALNYALERTAP--DAEIIAVIDADYQVEPDWLKRLVPIFDDPRVGFVQAPQDYRDGEESLFKRMCYAEYKGFFDIGM 147 (236)
T ss_pred chHHHHHHHHhcCC--CCCEEEEEcCCCCcCHHHHHHHHHHhcCCCeeEEecCccccCCCccHHHHHHhHHHHHHHHHHh
Confidence 57789999998763 35999999999999999642110 000110 000 0 00 0000 00
Q ss_pred c------ccccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 63 P------YASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 63 ~------~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
+ .....|+.++++|+.|.++|||++.+ ..||.||..|+...|+++...+
T Consensus 148 ~~~~~~~~~~~~g~~~~~rr~~~~~iGgf~~~~---~~eD~dl~~r~~~~G~~~~~~~ 202 (236)
T cd06435 148 VSRNERNAIIQHGTMCLIRRSALDDVGGWDEWC---ITEDSELGLRMHEAGYIGVYVA 202 (236)
T ss_pred ccccccCceEEecceEEEEHHHHHHhCCCCCcc---ccchHHHHHHHHHCCcEEEEcc
Confidence 0 01234777899999999999999986 4799999999999999998865
No 25
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=98.66 E-value=4.2e-08 Score=79.46 Aligned_cols=104 Identities=17% Similarity=0.187 Sum_probs=70.0
Q ss_pred cchhhhhhHHHHHHHhcCCccEEEEEeccccccCCCceec---cCCC-cee--------eeee----ccc-----cc--c
Q psy6976 4 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYT---CPGM-PRH--------MSVA----VDS-----MN--Y 60 (177)
Q Consensus 4 Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~---~~~~-p~~--------~s~~----~~~-----~~--~ 60 (177)
..++.++|.|+..|++ ||++|+|.|+++.++++.-. .... +.- .... +.+ +. +
T Consensus 70 ~G~~~a~n~g~~~a~g----d~i~~~DaD~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (241)
T cd06427 70 RTKPKACNYALAFARG----EYVVIYDAEDAPDPDQLKKAVAAFARLDDKLACVQAPLNYYNARENWLTRMFALEYAAWF 145 (241)
T ss_pred CchHHHHHHHHHhcCC----CEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEeCceEeeCCCccHHHHHHHHHHHHHH
Confidence 4578999999999887 99999999999999974210 1000 100 0000 000 00 0
Q ss_pred --------cccc-cccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 61 --------RLPY-ASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 61 --------~~~~-~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
.... ....|+.++++|+.|.++|||++. .+ .||.||..|+..+|+++...+
T Consensus 146 ~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~vgg~~~~--~~-~eD~~l~~rl~~~G~r~~~~~ 205 (241)
T cd06427 146 DYLLPGLARLGLPIPLGGTSNHFRTDVLRELGGWDPF--NV-TEDADLGLRLARAGYRTGVLN 205 (241)
T ss_pred HHHHHHHHhcCCeeecCCchHHhhHHHHHHcCCCCcc--cc-hhhHHHHHHHHHCCceEEEec
Confidence 0001 123466688999999999999984 23 699999999999999987754
No 26
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=98.63 E-value=2.6e-08 Score=86.87 Aligned_cols=108 Identities=19% Similarity=0.184 Sum_probs=70.7
Q ss_pred chhhhhhHHHHHHHhc-CCccEEEEEeccccccCCCceec----cCCCceeeeeec----cc-------------c--cc
Q psy6976 5 NRASLFNVGYAEAIKI-REFDCFIFHDVDLIPEDDRNLYT----CPGMPRHMSVAV----DS-------------M--NY 60 (177)
Q Consensus 5 nra~~lN~g~~~a~~~-~~~d~iif~DvD~ip~~~~~~~~----~~~~p~~~s~~~----~~-------------~--~~ 60 (177)
.|+.++|.|++.|... .+.|+++|.|.|++++++.+... ........+... .. + .+
T Consensus 115 Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~~~p~~l~~lv~~~~~~~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (384)
T TIGR03469 115 GKLWAVSQGIAAARTLAPPADYLLLTDADIAHGPDNLARLVARARAEGLDLVSLMVRLRCESFWEKLLIPAFVFFFQKLY 194 (384)
T ss_pred chHHHHHHHHHHHhccCCCCCEEEEECCCCCCChhHHHHHHHHHHhCCCCEEEecccccCCCHHHHHHHHHHHHHHHHhc
Confidence 3667999999999821 11399999999999999863211 000000000000 00 0 00
Q ss_pred cc--------cccccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEec
Q psy6976 61 RL--------PYASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRY 113 (177)
Q Consensus 61 ~~--------~~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~ 113 (177)
.. ......|++++++|+.|.++|||++.+.- -.||.+|..|+.++|.++.-.
T Consensus 195 ~~~~~~~~~~~~~~~~G~~~lirr~~~~~vGGf~~~~~~-~~ED~~L~~r~~~~G~~v~~~ 254 (384)
T TIGR03469 195 PFRWVNDPRRRTAAAAGGCILIRREALERIGGIAAIRGA-LIDDCTLAAAVKRSGGRIWLG 254 (384)
T ss_pred chhhhcCCCccceeecceEEEEEHHHHHHcCCHHHHhhC-cccHHHHHHHHHHcCCcEEEE
Confidence 00 11225799999999999999999975433 369999999999999887653
No 27
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.63 E-value=1.1e-07 Score=75.04 Aligned_cols=102 Identities=18% Similarity=0.162 Sum_probs=68.5
Q ss_pred chhhhhhHHHHHHHhcCCccEEEEEeccccccCCCcee--c-cCC-------Cceeeee------ecccc----------
Q psy6976 5 NRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLY--T-CPG-------MPRHMSV------AVDSM---------- 58 (177)
Q Consensus 5 nra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~--~-~~~-------~p~~~s~------~~~~~---------- 58 (177)
.++.++|.|+..|.+ |+++|+|.|+++.++++.. . ... .+..... ....+
T Consensus 69 g~~~a~n~g~~~~~~----d~i~~~D~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (229)
T cd04192 69 GKKNALTTAIKAAKG----DWIVTTDADCVVPSNWLLTFVAFIQKEQIGLVAGPVIYFKGKSLLAKFQRLDWLSLLGLIA 144 (229)
T ss_pred hhHHHHHHHHHHhcC----CEEEEECCCcccCHHHHHHHHHHhhcCCCcEEeeeeeecCCccHHHHHHHHHHHHHHHHHh
Confidence 456789999998887 9999999999999987421 1 111 0111100 00000
Q ss_pred ---cccccccccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCC-eEEe
Q psy6976 59 ---NYRLPYASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGL-QIIR 112 (177)
Q Consensus 59 ---~~~~~~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~-~i~r 112 (177)
....+ ....|+.++++++.|.++||||+.+. ...||+|+..|+..+|. ++.-
T Consensus 145 ~~~~~~~~-~~~~g~~~~~rr~~~~~~ggf~~~~~-~~~eD~~~~~~~~~~g~~~~~~ 200 (229)
T cd04192 145 GSFGLGKP-FMCNGANMAYRKEAFFEVGGFEGNDH-IASGDDELLLAKVASKYPKVAY 200 (229)
T ss_pred hHHHhcCc-cccccceEEEEHHHHHHhcCCccccc-cccCCHHHHHHHHHhCCCCEEE
Confidence 00001 12357889999999999999998753 46799999999999999 6543
No 28
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=98.62 E-value=1.1e-07 Score=75.44 Aligned_cols=102 Identities=21% Similarity=0.208 Sum_probs=69.9
Q ss_pred hhhhhhHHHHHHHhcCCccEEEEEeccccccCCCcee---ccCCCc--------eeeeeecc------c-------c---
Q psy6976 6 RASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLY---TCPGMP--------RHMSVAVD------S-------M--- 58 (177)
Q Consensus 6 ra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~---~~~~~p--------~~~s~~~~------~-------~--- 58 (177)
++.++|.|++.|.+ ||++|+|.|.++.++.+.. .+...| ..+..... . +
T Consensus 72 ~~~~~n~~~~~a~~----d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (234)
T cd06421 72 KAGNLNNALAHTTG----DFVAILDADHVPTPDFLRRTLGYFLDDPKVALVQTPQFFYNPDPFDWLADGAPNEQELFYGV 147 (234)
T ss_pred cHHHHHHHHHhCCC----CEEEEEccccCcCccHHHHHHHHHhcCCCeEEEecceEEecCCcchhHHHHHHHHHHHHHHH
Confidence 56678999998876 9999999999999986321 111101 11100000 0 0
Q ss_pred ---ccc-ccccccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 59 ---NYR-LPYASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 59 ---~~~-~~~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
... .....+.|+.++++|+.|.++|||++.+. .||.+|..|+..+|+++...+
T Consensus 148 ~~~~~~~~~~~~~~g~~~~~r~~~~~~ig~~~~~~~---~eD~~l~~r~~~~g~~i~~~~ 204 (234)
T cd06421 148 IQPGRDRWGAAFCCGSGAVVRREALDEIGGFPTDSV---TEDLATSLRLHAKGWRSVYVP 204 (234)
T ss_pred HHHHHhhcCCceecCceeeEeHHHHHHhCCCCccce---eccHHHHHHHHHcCceEEEec
Confidence 000 01233468899999999999999997653 699999999999999987754
No 29
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=98.60 E-value=1.2e-07 Score=84.11 Aligned_cols=103 Identities=20% Similarity=0.251 Sum_probs=71.0
Q ss_pred chhhhhhHHHHHHHhcCCccEEEEEeccccccCCCceecc---CCCcee--e------------eeecc--cccc-----
Q psy6976 5 NRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTC---PGMPRH--M------------SVAVD--SMNY----- 60 (177)
Q Consensus 5 nra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~~---~~~p~~--~------------s~~~~--~~~~----- 60 (177)
.|+.++|.|+..|.+ |++++.|.|++++++.+.... .+.|.- + ..... ++..
T Consensus 142 Gka~AlN~gl~~a~~----d~iv~lDAD~~~~~d~L~~lv~~~~~~~~~g~v~g~~~~~~~~~~~~~~~~~e~~~~~~~~ 217 (444)
T PRK14583 142 GKAIALRMGAAAARS----EYLVCIDGDALLDKNAVPYLVAPLIANPRTGAVTGNPRIRTRSTLIGRVQVGEFSSIIGLI 217 (444)
T ss_pred CHHHHHHHHHHhCCC----CEEEEECCCCCcCHHHHHHHHHHHHhCCCeEEEEccceecCCCcchhhHHHHHHHHHHHHH
Confidence 588899999998876 999999999999999642110 011110 0 00000 0000
Q ss_pred ---cccc---cccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 61 ---RLPY---ASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 61 ---~~~~---~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
...+ ....|++.+++|+.+.++|||++++. .||.|+..||..+|+++...+
T Consensus 218 ~~~~~~~g~~~~~sG~~~~~rr~al~~vGg~~~~~i---~ED~dl~~rl~~~G~~i~~~p 274 (444)
T PRK14583 218 KRTQRVYGQVFTVSGVVAAFRRRALADVGYWSPDMI---TEDIDISWKLQLKHWSVFFEP 274 (444)
T ss_pred HHHHHHhCCceEecCceeEEEHHHHHHcCCCCCCcc---cccHHHHHHHHHcCCeEEEee
Confidence 0001 12347888999999999999999875 599999999999999987655
No 30
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.56 E-value=2.6e-07 Score=70.89 Aligned_cols=106 Identities=19% Similarity=0.113 Sum_probs=71.3
Q ss_pred cchhhhhhHHHHHHHhcCCccEEEEEeccccccCCCcee---ccCCCc--eeeeee-----cc--cccc----------c
Q psy6976 4 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLY---TCPGMP--RHMSVA-----VD--SMNY----------R 61 (177)
Q Consensus 4 Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~---~~~~~p--~~~s~~-----~~--~~~~----------~ 61 (177)
...+.++|.|++.|.+ ||++|+|.|.++.++.... .+...| .-+... -+ .... .
T Consensus 61 ~g~~~a~n~~~~~a~~----~~v~~ld~D~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (202)
T cd06433 61 KGIYDAMNKGIALATG----DIIGFLNSDDTLLPGALLAVVAAFAEHPEVDVVYGDVLLVDENGRVIGRRRPPPFLDKFL 136 (202)
T ss_pred cCHHHHHHHHHHHcCC----CEEEEeCCCcccCchHHHHHHHHHHhCCCccEEEeeeEEEcCCCCcccCCCCcchhhhHH
Confidence 4678999999999887 9999999999999885321 111111 000000 00 0000 0
Q ss_pred ccccccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecCC
Q psy6976 62 LPYASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPP 115 (177)
Q Consensus 62 ~~~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~~ 115 (177)
..-....++.++++++.|.+++||++.+. .+||.||..|+...|.++...+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~--~~~D~~~~~r~~~~g~~~~~~~~ 188 (202)
T cd06433 137 LYGMPICHQATFFRRSLFEKYGGFDESYR--IAADYDLLLRLLLAGKIFKYLPE 188 (202)
T ss_pred hhcCcccCcceEEEHHHHHHhCCCchhhC--chhhHHHHHHHHHcCCceEecch
Confidence 01123445667899999999999999875 24899999999999999866543
No 31
>PRK11204 N-glycosyltransferase; Provisional
Probab=98.55 E-value=1.2e-07 Score=82.89 Aligned_cols=104 Identities=23% Similarity=0.274 Sum_probs=71.9
Q ss_pred chhhhhhHHHHHHHhcCCccEEEEEeccccccCCCceec---cCCCceeeee--------------eccccccc------
Q psy6976 5 NRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYT---CPGMPRHMSV--------------AVDSMNYR------ 61 (177)
Q Consensus 5 nra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~---~~~~p~~~s~--------------~~~~~~~~------ 61 (177)
.++.++|.|+..|.+ |+++++|.|.+++++.+... ....|..-.+ .+....+.
T Consensus 121 Gka~aln~g~~~a~~----d~i~~lDaD~~~~~d~L~~l~~~~~~~~~v~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (420)
T PRK11204 121 GKANALNTGAAAARS----EYLVCIDGDALLDPDAAAYMVEHFLHNPRVGAVTGNPRIRNRSTLLGRIQVGEFSSIIGLI 196 (420)
T ss_pred CHHHHHHHHHHHcCC----CEEEEECCCCCCChhHHHHHHHHHHhCCCeEEEECCceeccchhHHHHHHHHHHHHhhhHH
Confidence 478899999998877 99999999999999964211 1011111000 00000000
Q ss_pred -------ccccccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecCC
Q psy6976 62 -------LPYASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPP 115 (177)
Q Consensus 62 -------~~~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~~ 115 (177)
-......|++++++|+.+.++|||++.+. .||.|+..|+..+|+++.-.+.
T Consensus 197 ~~~~~~~~~~~~~~G~~~~~rr~~l~~vgg~~~~~~---~ED~~l~~rl~~~G~~i~~~p~ 254 (420)
T PRK11204 197 KRAQRVYGRVFTVSGVITAFRKSALHEVGYWSTDMI---TEDIDISWKLQLRGWDIRYEPR 254 (420)
T ss_pred HHHHHHhCCceEecceeeeeeHHHHHHhCCCCCCcc---cchHHHHHHHHHcCCeEEeccc
Confidence 00112347888999999999999999875 5999999999999999987653
No 32
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=98.44 E-value=5.5e-07 Score=76.05 Aligned_cols=106 Identities=26% Similarity=0.326 Sum_probs=71.5
Q ss_pred hhhhhHHHHHHHhcCCccEEEEEeccccccCCCce--ecc----C----CCceee--------eee---c----------
Q psy6976 7 ASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNL--YTC----P----GMPRHM--------SVA---V---------- 55 (177)
Q Consensus 7 a~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~--~~~----~----~~p~~~--------s~~---~---------- 55 (177)
|.+-|.|++.|.+. ..+|+++++-|+++.++++. ..+ + -.|... ... .
T Consensus 70 agg~n~g~~~a~~~-~~~~~l~LN~D~~~~~~~l~~ll~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (305)
T COG1216 70 AGGFNRGIKYALAK-GDDYVLLLNPDTVVEPDLLEELLKAAEEDPAAGVVGPLIRNYDESLYIDRRGGESDGLTGGWRAS 148 (305)
T ss_pred hhhhhHHHHHHhcC-CCcEEEEEcCCeeeChhHHHHHHHHHHhCCCCeEeeeeEecCCCCcchheeccccccccccceec
Confidence 44578999999872 22389999999999888631 000 0 011110 000 0
Q ss_pred cccccc------cccc-ccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 56 DSMNYR------LPYA-SLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 56 ~~~~~~------~~~~-~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
...... .... .+.|+.+.++++.|.+||||||.|--+. ||.|++.|+..+|+++...+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~G~~~li~~~~~~~vG~~de~~F~y~-eD~D~~~R~~~~G~~i~~~p 213 (305)
T COG1216 149 PLLEIAPDLSSYLEVVASLSGACLLIRREAFEKVGGFDERFFIYY-EDVDLCLRARKAGYKIYYVP 213 (305)
T ss_pred ccccccccccchhhhhhhcceeeeEEcHHHHHHhCCCCcccceee-hHHHHHHHHHHcCCeEEEee
Confidence 000000 0112 2678999999999999999999998876 99999999999999887754
No 33
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=98.36 E-value=4.6e-07 Score=86.47 Aligned_cols=103 Identities=18% Similarity=0.198 Sum_probs=71.5
Q ss_pred chhhhhhHHHHHHHhcCCccEEEEEeccccccCCCceec--c-CC--------Cceeeeee---------cccc------
Q psy6976 5 NRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYT--C-PG--------MPRHMSVA---------VDSM------ 58 (177)
Q Consensus 5 nra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~--~-~~--------~p~~~s~~---------~~~~------ 58 (177)
.||-++|.|++.|.+ ||+++.|.|.+|.+++.... + .. .|.++... ..+.
T Consensus 326 gKAGnLN~aL~~a~G----EyIavlDAD~ip~pdfL~~~V~~f~~dP~VglVQtp~~f~n~dp~~rnl~~~~~~~~e~~~ 401 (852)
T PRK11498 326 AKAGNINNALKYAKG----EFVAIFDCDHVPTRSFLQMTMGWFLKDKKLAMMQTPHHFFSPDPFERNLGRFRKTPNEGTL 401 (852)
T ss_pred chHHHHHHHHHhCCC----CEEEEECCCCCCChHHHHHHHHHHHhCCCeEEEEcceeccCCchHHHhhHHHhhcccchhH
Confidence 477889999999887 99999999999999974311 1 11 12111000 0000
Q ss_pred cccc------c--ccccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 59 NYRL------P--YASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 59 ~~~~------~--~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
-|.. . ...+.|+++.++|+.|.++|||+++.. .||.|+..|+..+|+++.-.+
T Consensus 402 fy~~iq~g~~~~~a~~~~Gs~aviRReaLeeVGGfd~~ti---tED~dlslRL~~~Gyrv~yl~ 462 (852)
T PRK11498 402 FYGLVQDGNDMWDATFFCGSCAVIRRKPLDEIGGIAVETV---TEDAHTSLRLHRRGYTSAYMR 462 (852)
T ss_pred HHHHHHhHHHhhcccccccceeeeEHHHHHHhcCCCCCcc---CccHHHHHHHHHcCCEEEEEe
Confidence 0000 0 022568888999999999999998753 699999999999999987643
No 34
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=98.31 E-value=8.9e-07 Score=76.92 Aligned_cols=104 Identities=19% Similarity=0.210 Sum_probs=66.1
Q ss_pred hhhhhhHHHHHHHhcCCccEEEEEeccccccCCCceec--cCCCce--------------eeeeecc----cccc-----
Q psy6976 6 RASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYT--CPGMPR--------------HMSVAVD----SMNY----- 60 (177)
Q Consensus 6 ra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~--~~~~p~--------------~~s~~~~----~~~~----- 60 (177)
|..+++.++++|++ |+++|.|.|++++++++... ....|. .+..... ...+
T Consensus 114 K~~~l~~~~~~a~g----e~i~~~DaD~~~~p~~L~~lv~~~~~~~v~~V~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 189 (373)
T TIGR03472 114 KVSNLINMLPHARH----DILVIADSDISVGPDYLRQVVAPLADPDVGLVTCLYRGRPVPGFWSRLGAMGINHNFLPSVM 189 (373)
T ss_pred HHHHHHHHHHhccC----CEEEEECCCCCcChhHHHHHHHHhcCCCcceEeccccCCCCCCHHHHHHHHHhhhhhhHHHH
Confidence 44456667777776 99999999999999974210 000010 0000000 0000
Q ss_pred ---cc-cccccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 61 ---RL-PYASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 61 ---~~-~~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
.. ......|.+++++|+.|.++|||++...- =.||.+|..|+..+|.++.-.+
T Consensus 190 ~~~~~~~~~~~~G~~~a~RR~~l~~iGGf~~~~~~-~~ED~~l~~~i~~~G~~v~~~~ 246 (373)
T TIGR03472 190 VARALGRARFCFGATMALRRATLEAIGGLAALAHH-LADDYWLGELVRALGLRVVLAP 246 (373)
T ss_pred HHHhccCCccccChhhheeHHHHHHcCChHHhccc-chHHHHHHHHHHHcCCeEEecc
Confidence 00 01224688889999999999999863322 2499999999999999997643
No 35
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=98.30 E-value=1.8e-06 Score=62.21 Aligned_cols=89 Identities=21% Similarity=0.162 Sum_probs=66.4
Q ss_pred CcchhhhhhHHHHHHHhcCCccEEEEEeccccccCCCceec--c-CCCce-eeeeecccccccccccccccceeeeeHHH
Q psy6976 3 PFNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYT--C-PGMPR-HMSVAVDSMNYRLPYASLFGGVCALNKEH 78 (177)
Q Consensus 3 ~Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~--~-~~~p~-~~s~~~~~~~~~~~~~~~~Gg~~~~~~~~ 78 (177)
...++.++|.|+..+.. |+++++|.|+++.+++.... . ...+. .+.. ..|+++++++.
T Consensus 62 ~~g~~~~~~~~~~~~~~----d~v~~~d~D~~~~~~~~~~~~~~~~~~~~~~~v~--------------~~~~~~~~~~~ 123 (156)
T cd00761 62 NQGLAAARNAGLKAARG----EYILFLDADDLLLPDWLERLVAELLADPEADAVG--------------GPGNLLFRREL 123 (156)
T ss_pred CCChHHHHHHHHHHhcC----CEEEEECCCCccCccHHHHHHHHHhcCCCceEEe--------------ccchheeeHHH
Confidence 46788899999998865 99999999999998864221 0 00111 1110 00888899999
Q ss_pred HhhhcCCCCCcccCCCCchHHHHHHHHcCCeE
Q psy6976 79 FQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQI 110 (177)
Q Consensus 79 f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i 110 (177)
|.+++|+++.+.+| +||.++..++...|..+
T Consensus 124 ~~~~~~~~~~~~~~-~ed~~~~~~~~~~g~~~ 154 (156)
T cd00761 124 LEEIGGFDEALLSG-EEDDDFLLRLLRGGKVA 154 (156)
T ss_pred HHHhCCcchHhcCC-cchHHHHHHHHhhcccc
Confidence 99999999988555 89999999999887643
No 36
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=98.27 E-value=1.1e-06 Score=76.64 Aligned_cols=135 Identities=23% Similarity=0.401 Sum_probs=91.6
Q ss_pred chhhhhhHHHHHHHhcCCccEEEEEeccccccCCCceec-----------cCCCcee--------eeeecccccc-----
Q psy6976 5 NRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYT-----------CPGMPRH--------MSVAVDSMNY----- 60 (177)
Q Consensus 5 nra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~-----------~~~~p~~--------~s~~~~~~~~----- 60 (177)
-|+.++|.|+..|.+ |++++.|+|.+|++|++... +...|.. +...+..+.+
T Consensus 124 gK~~al~~~l~~~~~----d~V~~~DaD~~~~~d~l~~~~~~f~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 199 (439)
T COG1215 124 GKAGALNNGLKRAKG----DVVVILDADTVPEPDALRELVSPFEDPPVGAVVGTPRIRNRPDPSNLLGRIQAIEYLSAFY 199 (439)
T ss_pred cchHHHHHHHhhcCC----CEEEEEcCCCCCChhHHHHHHhhhcCCCeeEEeCCceeeecCChhhhcchhcchhhhhhHH
Confidence 367889999998876 99999999999999974211 0011211 1111111100
Q ss_pred -------ccc-ccccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecCCceeEEeeecCCCCCCCh
Q psy6976 61 -------RLP-YASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKANP 132 (177)
Q Consensus 61 -------~~~-~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~~~~~~~~~l~H~~~~~n~ 132 (177)
+.. .....|.+.+++|+.+.++||+++... .||.++..||..+|+++...+.. +-+. ..|
T Consensus 200 ~~~~~~~~~g~~~~~~G~~~~~rr~aL~~~g~~~~~~i---~ED~~lt~~l~~~G~~~~~~~~~------~~~~---~~p 267 (439)
T COG1215 200 FRLRAASKGGLISFLSGSSSAFRRSALEEVGGWLEDTI---TEDADLTLRLHLRGYRVVYVPEA------IVWT---EAP 267 (439)
T ss_pred HhhhhhhhcCCeEEEcceeeeEEHHHHHHhCCCCCCce---eccHHHHHHHHHCCCeEEEeecc------eEee---eCc
Confidence 001 133678999999999999999999875 59999999999999998775422 3333 344
Q ss_pred HHHHHHHhcCceecccCCceeeE
Q psy6976 133 QRYEKLYSGHKRYKKDGLTSLKY 155 (177)
Q Consensus 133 ~~~~~~~~~~~~~~~dGl~~~~y 155 (177)
+.+..+.+++.||+.-++..+.+
T Consensus 268 ~t~~~~~~Qr~RW~~g~~~~~~~ 290 (439)
T COG1215 268 ETLKELWRQRLRWARGGLQVLLL 290 (439)
T ss_pred ccHHHHHHHHHHHHcccceeeeh
Confidence 44555667777888888777754
No 37
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=98.27 E-value=1.7e-06 Score=81.40 Aligned_cols=103 Identities=17% Similarity=0.231 Sum_probs=70.8
Q ss_pred chhhhhhHHHHHHHhcCCccEEEEEeccccccCCCceecc-----C-C-----Cceeeee-e-ccc----c---------
Q psy6976 5 NRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTC-----P-G-----MPRHMSV-A-VDS----M--------- 58 (177)
Q Consensus 5 nra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~~-----~-~-----~p~~~s~-~-~~~----~--------- 58 (177)
.||.++|.|++.|.+ ||+++.|.|++|.++++.... . + .|.++.. . +++ +
T Consensus 215 ~KAgnLN~al~~a~g----d~Il~lDAD~v~~pd~L~~~v~~f~~dp~v~~Vqtp~~f~~p~~~~~nl~~~~~~~~e~~~ 290 (713)
T TIGR03030 215 AKAGNINNALKHTDG----ELILIFDADHVPTRDFLQRTVGWFVEDPKLFLVQTPHFFVSPDPIERNLGTFRRMPNENEL 290 (713)
T ss_pred CChHHHHHHHHhcCC----CEEEEECCCCCcChhHHHHHHHHHHhCCCEEEEeCCeeccCCCHHhhhhHHHHHhhhHHHH
Confidence 477889999998877 999999999999999742110 1 0 1111100 0 000 0
Q ss_pred ccc------cc--ccccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 59 NYR------LP--YASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 59 ~~~------~~--~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
-+. -. ...+.|.++.++|+.|.+||||++... .||.|+..|+..+|+++...+
T Consensus 291 f~~~i~~g~~~~~~~~~~Gs~~~iRR~al~~iGGf~~~~v---tED~~l~~rL~~~G~~~~y~~ 351 (713)
T TIGR03030 291 FYGLIQDGNDFWNAAFFCGSAAVLRREALDEIGGIAGETV---TEDAETALKLHRRGWNSAYLD 351 (713)
T ss_pred HHHHHHHHHhhhCCeeecCceeEEEHHHHHHcCCCCCCCc---CcHHHHHHHHHHcCCeEEEec
Confidence 000 00 112458888999999999999998654 699999999999999976643
No 38
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=98.16 E-value=7.8e-06 Score=64.49 Aligned_cols=114 Identities=16% Similarity=0.179 Sum_probs=72.4
Q ss_pred cchhhhhhHHHHHHHhcCCccEEEEEeccccccCCCcee--c--cCCCc------eeeee-eccccc-------------
Q psy6976 4 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLY--T--CPGMP------RHMSV-AVDSMN------------- 59 (177)
Q Consensus 4 Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~--~--~~~~p------~~~s~-~~~~~~------------- 59 (177)
...+.++|.|++.|.+ |+++|+|.|+++.++.+.. . ....+ +.... ....+.
T Consensus 64 ~G~~~a~n~g~~~a~g----d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (224)
T cd06442 64 RGLGSAYIEGFKAARG----DVIVVMDADLSHPPEYIPELLEAQLEGGADLVIGSRYVEGGGVEGWGLKRKLISRGANLL 139 (224)
T ss_pred CChHHHHHHHHHHcCC----CEEEEEECCCCCCHHHHHHHHHHHhcCCCCEEEEeeeecCCccCCCcHHHHHHHHHHHHH
Confidence 4568899999999988 9999999999998885311 0 11100 00000 000000
Q ss_pred ----ccccccccccceeeeeHHHHhhhcCCCCCcccCC-CCchHHHHHHHHcCCeEEecCCceeEEeeecCCCCC
Q psy6976 60 ----YRLPYASLFGGVCALNKEHFQLVNGFSNEYWGWG-GEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEK 129 (177)
Q Consensus 60 ----~~~~~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG-~ED~dl~~Rl~~~G~~i~r~~~~~~~~~~l~H~~~~ 129 (177)
...+.....||.++++|+.+.+++ +.+...| .+|.||..|+..+|.++...+ +....|....
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~r~~~~~ig---~~~~~~~~~~~~~l~~~~~~~g~~i~~~p-----~~~~~~~~g~ 206 (224)
T cd06442 140 ARLLLGRKVSDPTSGFRAYRREVLEKLI---DSLVSKGYKFQLELLVRARRLGYRIVEVP-----ITFVDREHGE 206 (224)
T ss_pred HHHHcCCCCCCCCCccchhhHHHHHHHh---hhccCCCcEEeHHHHHHHHHcCCeEEEeC-----eEEeccCCCc
Confidence 011233456788899999999998 2233334 348899999999999998855 2224565544
No 39
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=98.15 E-value=6.1e-06 Score=65.68 Aligned_cols=105 Identities=13% Similarity=0.082 Sum_probs=65.8
Q ss_pred chhhhhhHHHHHHHhcCCccEEEEEeccccccCCCcee---ccC-C-----Cceeeeeec--c------c--cc-----c
Q psy6976 5 NRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLY---TCP-G-----MPRHMSVAV--D------S--MN-----Y 60 (177)
Q Consensus 5 nra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~---~~~-~-----~p~~~s~~~--~------~--~~-----~ 60 (177)
.++.++|.|+..|.+ ||++|+|.|+++.++++.- .+. . .+....... . . +. .
T Consensus 64 g~~~a~n~g~~~a~~----d~v~~lD~D~~~~~~~l~~l~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (235)
T cd06434 64 GKRRALAEGIRHVTT----DIVVLLDSDTVWPPNALPEMLKPFEDPKVGGVGTNQRILRPRDSKWSFLAAEYLERRNEEI 139 (235)
T ss_pred ChHHHHHHHHHHhCC----CEEEEECCCceeChhHHHHHHHhccCCCEeEEcCceEeecCcccHHHHHHHHHHHHHHHHH
Confidence 577889999998877 9999999999999997411 111 0 010000000 0 0 00 0
Q ss_pred -----c-ccccccccceeeeeHHHHhhhcCCCCCc---cc-----CCCCchHHHHHHHHcCCeEEecC
Q psy6976 61 -----R-LPYASLFGGVCALNKEHFQLVNGFSNEY---WG-----WGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 61 -----~-~~~~~~~Gg~~~~~~~~f~~vnGfde~f---~G-----WG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
. .......|+.++++++.+.++ ||++.| ++ -.+||.+|..|+...|+++.-.+
T Consensus 140 ~~~~~~~~~~~~~~G~~~~~rr~~l~~~-~~~~~~~~~~~~~~~~~~~eD~~l~~~~~~~g~~~~~~~ 206 (235)
T cd06434 140 RAAMSYDGGVPCLSGRTAAYRTEILKDF-LFLEEFTNETFMGRRLNAGDDRFLTRYVLSHGYKTVYQY 206 (235)
T ss_pred HHHHhhCCCEEEccCcHHHHHHHHHhhh-hhHHHhhhhhhcCCCCCcCchHHHHHHHHHCCCeEEEec
Confidence 0 001123456677888888887 455554 12 25799999999999999987754
No 40
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=98.11 E-value=6.3e-06 Score=68.45 Aligned_cols=107 Identities=14% Similarity=0.139 Sum_probs=68.6
Q ss_pred hhhhhhHHHHHHHhcCCccEEEEEeccccccCCCceeccC---CCce--------eee------eeccccc---c----c
Q psy6976 6 RASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTCP---GMPR--------HMS------VAVDSMN---Y----R 61 (177)
Q Consensus 6 ra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~~~---~~p~--------~~s------~~~~~~~---~----~ 61 (177)
|+..+|.+... . ...+|||++.|+|.+|.++++..... ..|. .+. ..+..+. + .
T Consensus 81 Kag~l~~~~~~-~-~~~~~~i~~~DaD~~~~p~~l~~~v~~~~~~~~vg~vq~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 158 (254)
T cd04191 81 KAGNIADFCRR-W-GSRYDYMVVLDADSLMSGDTIVRLVRRMEANPRAGIIQTAPKLIGAETLFARLQQFANRLYGPVFG 158 (254)
T ss_pred cHHHHHHHHHH-h-CCCCCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEeCCceeECCCCHHHHHHHHHHHHHHHHHH
Confidence 45555655442 1 13569999999999999997532111 1111 110 0000000 0 0
Q ss_pred -------ccccccccceeeeeHHHHhhhcCCCC--CcccCC----CCchHHHHHHHHcCCeEEecC
Q psy6976 62 -------LPYASLFGGVCALNKEHFQLVNGFSN--EYWGWG----GEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 62 -------~~~~~~~Gg~~~~~~~~f~~vnGfde--~f~GWG----~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
.....++|.++.++|+.|.+++|+++ .+.||+ -||.++..|+..+|+++.-.+
T Consensus 159 ~~~~~~~~~~~~~~G~~~~~Rr~al~~~~~~~~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~ 224 (254)
T cd04191 159 RGLAAWQGGEGNYWGHNAIIRVAAFMEHCALPVLPGRPPFGGHILSHDFVEAALMRRAGWEVRLAP 224 (254)
T ss_pred HHHHHhcCCccCccceEEEEEHHHHHHhcCCccccCCCCCCCCeecHHHHHHHHHHHcCCEEEEcc
Confidence 01124568899999999999999875 577886 489999999999999987755
No 41
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=98.09 E-value=5.9e-06 Score=73.42 Aligned_cols=103 Identities=18% Similarity=0.236 Sum_probs=67.2
Q ss_pred chhhhhhHHHHHHHhcCCccEEEEEeccccccCCCceec---cCCCce-------eeee-------------eccc---c
Q psy6976 5 NRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYT---CPGMPR-------HMSV-------------AVDS---M 58 (177)
Q Consensus 5 nra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~---~~~~p~-------~~s~-------------~~~~---~ 58 (177)
.+|.++|.|+..|.+ ||+++.|.|++|++++.... ....|. .... .+.. +
T Consensus 118 Gka~AlN~gl~~s~g----~~v~~~DaD~~~~~d~L~~l~~~f~~~~~v~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (439)
T TIGR03111 118 GKAKALNAAIYNSIG----KYIIHIDSDGKLHKDAIKNMVTRFENNPDIHAMTGVILTDKELIEKTKGRFLKLIRRCEYF 193 (439)
T ss_pred CHHHHHHHHHHHccC----CEEEEECCCCCcChHHHHHHHHHHHhCCCeEEEEeEEecCchhhhhhcchhhhHhHHhHHH
Confidence 578899999999887 99999999999999863211 001110 0000 0000 0
Q ss_pred ccc------ccc-------cccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHH-cCCeEEecC
Q psy6976 59 NYR------LPY-------ASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKA-AGLQIIRYP 114 (177)
Q Consensus 59 ~~~------~~~-------~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~-~G~~i~r~~ 114 (177)
.+. .+. ....|+.++++|+.+.++|||++... +||.|+..|+.. .|.++.-.+
T Consensus 194 ~y~~~~l~~r~~~s~~~~~~~~sGa~~~~Rr~~l~~vggf~~~~i---~ED~~l~~rl~~~~g~kv~~~~ 260 (439)
T TIGR03111 194 EYAQAFLAGRNFESQVNSLFTLSGAFSAFRRETILKTQLYNSETV---GEDTDMTFQIRELLDGKVYLCE 260 (439)
T ss_pred HHHHHHHhhhHHHHhcCCeEEEccHHHhhhHHHHHHhCCCCCCCc---CccHHHHHHHHHhcCCeEEECC
Confidence 000 000 11346667899999999999998764 799999999974 577776544
No 42
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=98.06 E-value=8.2e-06 Score=65.79 Aligned_cols=102 Identities=18% Similarity=0.251 Sum_probs=65.6
Q ss_pred CcchhhhhhHHHHHHHhcCCccEEEEEeccccccCCCce-----ec-------cCC----Cceeeeeecc-cccc-----
Q psy6976 3 PFNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNL-----YT-------CPG----MPRHMSVAVD-SMNY----- 60 (177)
Q Consensus 3 ~Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~-----~~-------~~~----~p~~~s~~~~-~~~~----- 60 (177)
...++.++|.|+..|.+ |+++|+|.|+++.+++.. +. |+. .+........ .+.+
T Consensus 94 ~~g~~~a~n~gi~~a~~----d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (251)
T cd06439 94 RRGKAAALNRALALATG----EIVVFTDANALLDPDALRLLVRHFADPSVGAVSGELVIVDGGGSGSGEGLYWKYENWLK 169 (251)
T ss_pred CCChHHHHHHHHHHcCC----CEEEEEccccCcCHHHHHHHHHHhcCCCccEEEeEEEecCCcccchhHHHHHHHHHHHH
Confidence 35688999999999887 999999999999988631 10 000 0000000000 0000
Q ss_pred ----cc-cccccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 61 ----RL-PYASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 61 ----~~-~~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
.. ......|++++++|+.|. ||++.. +.||.+|..|+...|.++...+
T Consensus 170 ~~~~~~~~~~~~~g~~~~~rr~~~~---~~~~~~---~~eD~~l~~~~~~~G~~~~~~~ 222 (251)
T cd06439 170 RAESRLGSTVGANGAIYAIRRELFR---PLPADT---INDDFVLPLRIARQGYRVVYEP 222 (251)
T ss_pred HHHHhcCCeeeecchHHHhHHHHhc---CCCccc---chhHHHHHHHHHHcCCeEEecc
Confidence 00 012345677778887777 777654 4699999999999999987755
No 43
>PRK10018 putative glycosyl transferase; Provisional
Probab=98.03 E-value=1.7e-05 Score=66.78 Aligned_cols=115 Identities=13% Similarity=-0.020 Sum_probs=68.9
Q ss_pred cchhhhhhHHHHHHHhcCCccEEEEEeccccccCCCcee-------------ccCCC----------ceeeee-eccccc
Q psy6976 4 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLY-------------TCPGM----------PRHMSV-AVDSMN 59 (177)
Q Consensus 4 Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~-------------~~~~~----------p~~~s~-~~~~~~ 59 (177)
...+.++|.|+..|.+ ||++|+|.|.+..++.+.- .+... |..... ....+.
T Consensus 71 ~G~~~a~N~gi~~a~g----~~I~~lDaDD~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 146 (279)
T PRK10018 71 SGACAVRNQAIMLAQG----EYITGIDDDDEWTPNRLSVFLAHKQQLVTHAFLYANDYVCQGEVYSQPASLPLYPKSPYS 146 (279)
T ss_pred CCHHHHHHHHHHHcCC----CEEEEECCCCCCCccHHHHHHHHHHhCCCccEEEccceeecCcccccccccCCCCCCCCC
Confidence 3467889999999988 9999999999999885310 00000 000000 000000
Q ss_pred ccc-cccccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecCCceeEEeeecCC
Q psy6976 60 YRL-PYASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHR 126 (177)
Q Consensus 60 ~~~-~~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~~~~~~~~~l~H~ 126 (177)
+.. ....+.|+.+.. .....+.+|||+.+. ..||.||+.|+...|......+.....| .+.|.
T Consensus 147 ~~~~~~~n~ig~~~~~-~~~~~~~~~fd~~~~--~~eDydlwlrl~~~~~~~~~~~~~l~~y-~~~~~ 210 (279)
T PRK10018 147 RRLFYKRNIIGNQVFT-WAWRFKECLFDTELK--AAQDYDIFLRMVVEYGEPWKVEEATQIL-HINHG 210 (279)
T ss_pred HHHHHHhcCcCceeee-hhhhhhhcccCCCCC--ccccHHHHHHHHHhcCceEeeccceEEE-EcCCC
Confidence 000 013345655544 444456678999986 6899999999998887766655433333 34444
No 44
>PRK10063 putative glycosyl transferase; Provisional
Probab=97.93 E-value=3.9e-05 Score=63.26 Aligned_cols=111 Identities=17% Similarity=0.141 Sum_probs=68.1
Q ss_pred chhhhhhHHHHHHHhcCCccEEEEEeccccccCCCce--eccC-CCceeeee--ec---cc---c-ccccc-c---ccc-
Q psy6976 5 NRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNL--YTCP-GMPRHMSV--AV---DS---M-NYRLP-Y---ASL- 67 (177)
Q Consensus 5 nra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~--~~~~-~~p~~~s~--~~---~~---~-~~~~~-~---~~~- 67 (177)
..+.++|.|+..|.+ |+++|+|.|.+++++... .... ..+.-... .+ .. . ....+ + ...
T Consensus 69 G~~~A~N~Gi~~a~g----~~v~~ld~DD~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (248)
T PRK10063 69 GIYDAMNKGIAMAQG----RFALFLNSGDIFHQDAANFVRQLKMQKDNAMIIGDALLDFGDGHKIKRSAKPGWYIYHSLP 144 (248)
T ss_pred CHHHHHHHHHHHcCC----CEEEEEeCCcccCcCHHHHHHHHHhCCCCeEEEeeeEEEcCCCcEEEEccCChhHHhcCCC
Confidence 356899999999988 999999998888887411 1111 11110000 00 00 0 00001 1 111
Q ss_pred -ccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecCCceeEEee
Q psy6976 68 -FGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSM 122 (177)
Q Consensus 68 -~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~~~~~~~~~ 122 (177)
.+..+.+.++-+ +.+|||+.+. -.||.||+.|+..+|.++...+....+|.+
T Consensus 145 ~~~~~~~~~~~~~-~~~~fd~~~~--~~~Dydl~lrl~~~g~~~~~v~~~l~~y~~ 197 (248)
T PRK10063 145 ASHQAIFFPVSGL-KKWRYDLQYK--VSSDYALAARLYKAGYAFKKLNGLVSEFSM 197 (248)
T ss_pred CCCcEEEEEHHHH-hcCCCCcccc--hHHhHHHHHHHHHcCCcEEEcCceeEEEeC
Confidence 122334556655 4688999874 359999999999999999888877777653
No 45
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=97.91 E-value=4.2e-05 Score=69.52 Aligned_cols=109 Identities=22% Similarity=0.295 Sum_probs=71.2
Q ss_pred CCcchhhhhhHHHHHHHh-----cCCccEEEEEeccccccCCCceec---cCC-----Cceeeeee-----------ccc
Q psy6976 2 HPFNRASLFNVGYAEAIK-----IREFDCFIFHDVDLIPEDDRNLYT---CPG-----MPRHMSVA-----------VDS 57 (177)
Q Consensus 2 ~~Fnra~~lN~g~~~a~~-----~~~~d~iif~DvD~ip~~~~~~~~---~~~-----~p~~~s~~-----------~~~ 57 (177)
++..|+.++|.|+..+.. ...+|+++++|.|.+++|+..... ..+ .|. ++.. .+.
T Consensus 133 gp~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~Pd~Lr~~~~~~~~~~~VQ~pv-~~~~~~~~~~~ag~y~~e 211 (504)
T PRK14716 133 GPTSKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVIHPLELRLYNYLLPRHDFVQLPV-FSLPRDWGEWVAGTYMDE 211 (504)
T ss_pred CCCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcCccHHHHHHhhcCCCCEEecce-eccCCchhHHHHHHHHHH
Confidence 467899999999987632 124699999999999999974221 111 011 0000 000
Q ss_pred ccc----ccc-------ccccccceeeeeHHHHhhh----c-C-CCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 58 MNY----RLP-------YASLFGGVCALNKEHFQLV----N-G-FSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 58 ~~~----~~~-------~~~~~Gg~~~~~~~~f~~v----n-G-fde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
+.. ..+ .....|..++++|+.++++ | | ||++.. -||.|+..||..+|+++.-.+
T Consensus 212 f~~~~~~~l~~r~~LG~~~~~~Gtg~afRR~aLe~l~~~~GG~~fd~~sL---TED~dLglRL~~~G~rv~y~p 282 (504)
T PRK14716 212 FAESHLKDLPVREALGGLIPSAGVGTAFSRRALERLAAERGGQPFDSDSL---TEDYDIGLRLKRAGFRQIFVR 282 (504)
T ss_pred HHHHHHHHHHHHHhcCCccccCCeeEEeEHHHHHHHHhhcCCCCCCCCCc---chHHHHHHHHHHCCCEEEEec
Confidence 100 000 0124477889999999998 3 3 887633 499999999999999987754
No 46
>KOG3736|consensus
Probab=97.88 E-value=5.2e-06 Score=76.05 Aligned_cols=105 Identities=20% Similarity=0.259 Sum_probs=73.8
Q ss_pred hhhhhhHHHHHHHhcCCccEEEEEeccccccCCCc------------eeccCC-----------Cc-----ee-eeeecc
Q psy6976 6 RASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRN------------LYTCPG-----------MP-----RH-MSVAVD 56 (177)
Q Consensus 6 ra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~------------~~~~~~-----------~p-----~~-~s~~~~ 56 (177)
.-++|+.|+..|++ |.++|+|.=|-....+. ...|+- .+ +. +...+.
T Consensus 214 LIrARl~GA~~A~g----eVL~FLDsHcE~n~gWLePLL~~I~~~r~tvv~PvID~Id~~tf~y~~~~~~~rGgFdW~l~ 289 (578)
T KOG3736|consen 214 LIRARLLGASMATG----EVLTFLDSHCEVNVGWLEPLLARIAEDRKTVVCPVIDVIDDNTFEYEKQSELMRGGFDWELT 289 (578)
T ss_pred hHHHHhhhhhhhhc----hheeeeecceeEecCcchHHHHHhhhcCceeecceEEeecCcCceecccCccceeeeeccee
Confidence 34789999999999 99999998887655531 112321 00 00 000000
Q ss_pred -cc------------cccccc--cccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 57 -SM------------NYRLPY--ASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 57 -~~------------~~~~~~--~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
+| ....|+ ....||++|+.|+-|..+|+||+.+..||||-.||.-|++.=|-.+.-.|
T Consensus 290 f~w~~lP~~~~~~~~~~t~PirsPtMaGglFAI~r~yF~eiG~yD~gMdiwGGENlElSfrvWqCGG~lei~P 362 (578)
T KOG3736|consen 290 FKWERLPLPEEKRRELPTDPIRSPTMAGGLFAIDRKYFGELGSYDEGMDIWGGENLELSFRVWQCGGRLEIVP 362 (578)
T ss_pred EEeccCCccHhhcccCCCCCcCCcccCCceEEeeHHHHhhccCccccccccChhhceeeEEEeccCCeEEecC
Confidence 00 001233 35679999999999999999999999999999999999999999886644
No 47
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=97.65 E-value=5e-05 Score=55.87 Aligned_cols=84 Identities=21% Similarity=0.171 Sum_probs=53.7
Q ss_pred cchhhhhhHHHHHHHhcCCccEEEEEeccccccCCCceec---cCCCc-------eeeee--------ecc--ccc----
Q psy6976 4 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYT---CPGMP-------RHMSV--------AVD--SMN---- 59 (177)
Q Consensus 4 Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~---~~~~p-------~~~s~--------~~~--~~~---- 59 (177)
..++.++|.|+..|.+ |+++|+|.|.++.++.+... ....+ ..... ... .+.
T Consensus 64 ~g~~~~~n~~~~~~~~----~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (180)
T cd06423 64 GGKAGALNAGLRHAKG----DIVVVLDADTILEPDALKRLVVPFFADPKVGAVQGRVRVRNGSENLLTRLQAIEYLSIFR 139 (180)
T ss_pred CCchHHHHHHHHhcCC----CEEEEECCCCCcChHHHHHHHHHhccCCCeeeEeeeEEEecCcCcceeccchheecceee
Confidence 4578999999998866 99999999999998863210 00000 00000 000 000
Q ss_pred c-------cccccccccceeeeeHHHHhhhcCCCCCccc
Q psy6976 60 Y-------RLPYASLFGGVCALNKEHFQLVNGFSNEYWG 91 (177)
Q Consensus 60 ~-------~~~~~~~~Gg~~~~~~~~f~~vnGfde~f~G 91 (177)
. ........|+.++++++.|.++|||++.+.+
T Consensus 140 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ggf~~~~~~ 178 (180)
T cd06423 140 LGRRAQSALGGVLVLSGAFGAFRREALREVGGWDEDTLT 178 (180)
T ss_pred eeeehhheecceeecCchHHHHHHHHHHHhCCccccCcC
Confidence 0 0011345688899999999999999999754
No 48
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=97.63 E-value=3.4e-05 Score=62.58 Aligned_cols=105 Identities=13% Similarity=0.092 Sum_probs=69.5
Q ss_pred cchhhhhhHHHHHHHhcCCccEEEEEeccccccCCCceec--c-CC-------Cceee--------ee--ec-cc-----
Q psy6976 4 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYT--C-PG-------MPRHM--------SV--AV-DS----- 57 (177)
Q Consensus 4 Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~--~-~~-------~p~~~--------s~--~~-~~----- 57 (177)
+.++.++|.|+..|.+ |+++|+|.|+.+.++.+... . .. .++.. +. .+ ..
T Consensus 79 ~G~~~a~n~g~~~a~g----~~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~g~r~~~~~~~~~~~~~r~~~~~~~~~~ 154 (243)
T PLN02726 79 LGLGTAYIHGLKHASG----DFVVIMDADLSHHPKYLPSFIKKQRETGADIVTGTRYVKGGGVHGWDLRRKLTSRGANVL 154 (243)
T ss_pred CCHHHHHHHHHHHcCC----CEEEEEcCCCCCCHHHHHHHHHHHHhcCCcEEEEccccCCCCcCCccHHHHHHHHHHHHH
Confidence 5678899999999887 99999999999988763110 0 00 00000 00 00 00
Q ss_pred --ccccccccccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 58 --MNYRLPYASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 58 --~~~~~~~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
.-...+.....||..+++|+.+.+++.+.+.. ||. +|.||..|+..+|+++...|
T Consensus 155 ~~~~~~~~~~d~~g~~~~~rr~~~~~i~~~~~~~-~~~-~~~el~~~~~~~g~~i~~vp 211 (243)
T PLN02726 155 AQTLLWPGVSDLTGSFRLYKRSALEDLVSSVVSK-GYV-FQMEIIVRASRKGYRIEEVP 211 (243)
T ss_pred HHHHhCCCCCcCCCcccceeHHHHHHHHhhccCC-CcE-EehHHHHHHHHcCCcEEEeC
Confidence 00111223456788899999999998765532 443 58999999999999999865
No 49
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=97.56 E-value=0.00022 Score=56.18 Aligned_cols=105 Identities=14% Similarity=0.115 Sum_probs=68.4
Q ss_pred cchhhhhhHHHHHHHhcCCccEEEEEeccccccCCCcee--c--cCCC------ceeeeee--------cccc-------
Q psy6976 4 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLY--T--CPGM------PRHMSVA--------VDSM------- 58 (177)
Q Consensus 4 Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~--~--~~~~------p~~~s~~--------~~~~------- 58 (177)
..++.++|.|++.|.+ |+++++|.|..+.++.+.. . .... ++..... ...+
T Consensus 68 ~G~~~a~~~g~~~a~g----d~i~~ld~D~~~~~~~l~~l~~~~~~~~~~~v~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 143 (211)
T cd04188 68 RGKGGAVRAGMLAARG----DYILFADADLATPFEELEKLEEALKTSGYDIAIGSRAHLASAAVVKRSWLRNLLGRGFNF 143 (211)
T ss_pred CCcHHHHHHHHHHhcC----CEEEEEeCCCCCCHHHHHHHHHHHhccCCcEEEEEeeccCCcccccccHHHHHHHHHHHH
Confidence 4578999999999988 9999999999998885311 0 0000 0000000 0000
Q ss_pred ----cccccccccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 59 ----NYRLPYASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 59 ----~~~~~~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
-...++...-.|...++|+.+.++.+.. ...+|+ +|.||..|+..+|+++...+
T Consensus 144 ~~~~~~~~~~~d~~~g~~~~~r~~~~~~~~~~-~~~~~~-~d~el~~r~~~~g~~~~~vp 201 (211)
T cd04188 144 LVRLLLGLGIKDTQCGFKLFTRDAARRLFPRL-HLERWA-FDVELLVLARRLGYPIEEVP 201 (211)
T ss_pred HHHHHcCCCCcccccCceeEcHHHHHHHHhhh-hccceE-eeHHHHHHHHHcCCeEEEcC
Confidence 0011222223466789999999997653 345777 69999999999999988765
No 50
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=97.50 E-value=6.5e-05 Score=57.33 Aligned_cols=91 Identities=13% Similarity=0.105 Sum_probs=57.8
Q ss_pred cchhhhhhHHHHHHHhcCCccEEEEEeccccccCCCce--ecc-CCC-------ceeeeee---c---ccc---------
Q psy6976 4 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNL--YTC-PGM-------PRHMSVA---V---DSM--------- 58 (177)
Q Consensus 4 Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~--~~~-~~~-------p~~~s~~---~---~~~--------- 58 (177)
..++.++|.|+..|.+ |+++|+|.|.++.++.+. ..+ ... +...... . .++
T Consensus 65 ~G~~~a~n~g~~~a~g----d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (185)
T cd04179 65 FGKGAAVRAGFKAARG----DIVVTMDADLQHPPEDIPKLLEKLLEGGADVVIGSRFVRGGGAGMPLLRRLGSRLFNFLI 140 (185)
T ss_pred CCccHHHHHHHHHhcC----CEEEEEeCCCCCCHHHHHHHHHHHhccCCcEEEEEeecCCCcccchHHHHHHHHHHHHHH
Confidence 4578999999999998 999999999999888532 111 100 1000000 0 000
Q ss_pred c--ccccccccccceeeeeHHHHhhh--cCCCCCcccCCCCchHHHHH
Q psy6976 59 N--YRLPYASLFGGVCALNKEHFQLV--NGFSNEYWGWGGEDDDMSNR 102 (177)
Q Consensus 59 ~--~~~~~~~~~Gg~~~~~~~~f~~v--nGfde~f~GWG~ED~dl~~R 102 (177)
. ...+.....||.++++|+.|.++ +++++.|. +|.||..|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~r~~~~~i~~~~~~~~~~----~~~~~~~~ 184 (185)
T cd04179 141 RLLLGVRISDTQSGFRLFRREVLEALLSLLESNGFE----FGLELLVG 184 (185)
T ss_pred HHHcCCCCcCCCCceeeeHHHHHHHHHhhccccCcc----eeeEeeec
Confidence 0 11223456789999999999999 78877763 45555544
No 51
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=97.48 E-value=8e-05 Score=58.49 Aligned_cols=93 Identities=20% Similarity=0.374 Sum_probs=61.4
Q ss_pred CCccEEEEEeccccccCCCceecc-----CC------Cce-----eeeeecc----ccc-----ccccccccccceeeee
Q psy6976 21 REFDCFIFHDVDLIPEDDRNLYTC-----PG------MPR-----HMSVAVD----SMN-----YRLPYASLFGGVCALN 75 (177)
Q Consensus 21 ~~~d~iif~DvD~ip~~~~~~~~~-----~~------~p~-----~~s~~~~----~~~-----~~~~~~~~~Gg~~~~~ 75 (177)
..+|+++|.|.|+.++++++.... ++ .|. .+...+. .+. ........+|+.++++
T Consensus 30 a~~d~~~~~DsDi~v~p~~L~~lv~~l~~p~vglVt~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~G~~m~~r 109 (175)
T PF13506_consen 30 AKYDYLVISDSDIRVPPDYLRELVAPLADPGVGLVTGLPRGVPARGFWSRLEAAFFNFLPGVLQALGGAPFAWGGSMAFR 109 (175)
T ss_pred CCCCEEEEECCCeeECHHHHHHHHHHHhCCCCcEEEecccccCCcCHHHHHHHHHHhHHHHHHHHhcCCCceecceeeeE
Confidence 355999999999999999742111 00 011 1100000 000 0012345789999999
Q ss_pred HHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 76 KEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 76 ~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
|+++.++|||+. +...=.||..|..++...|+++.-.+
T Consensus 110 r~~L~~~GG~~~-l~~~ladD~~l~~~~~~~G~~v~~~~ 147 (175)
T PF13506_consen 110 REALEEIGGFEA-LADYLADDYALGRRLRARGYRVVLSP 147 (175)
T ss_pred HHHHHHcccHHH-HhhhhhHHHHHHHHHHHCCCeEEEcc
Confidence 999999999975 33334699999999999999998754
No 52
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=97.42 E-value=0.00032 Score=54.51 Aligned_cols=103 Identities=18% Similarity=0.075 Sum_probs=65.0
Q ss_pred chhhhhhHHHHHHHhcCCccEEEEEeccccccCCCce--ecc-CCCcee-eee---------------e-cccccc----
Q psy6976 5 NRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNL--YTC-PGMPRH-MSV---------------A-VDSMNY---- 60 (177)
Q Consensus 5 nra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~--~~~-~~~p~~-~s~---------------~-~~~~~~---- 60 (177)
..+.++|.|+..|.+ |+++|+|.|.++.++.+. +.. ...|.. +.. . ......
T Consensus 66 G~~~~~n~g~~~~~g----~~v~~ld~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (214)
T cd04196 66 GVARNFESLLQAADG----DYVFFCDQDDIWLPDKLERLLKAFLKDDKPLLVYSDLELVDENGNPIGESFFEYQKIKPGT 141 (214)
T ss_pred cHHHHHHHHHHhCCC----CEEEEECCCcccChhHHHHHHHHHhcCCCceEEecCcEEECCCCCCcccccccccccCCcc
Confidence 467788899888877 999999999999988531 111 111110 000 0 000000
Q ss_pred --c--ccccccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 61 --R--LPYASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 61 --~--~~~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
. .......|+.++++|+.+.++++|++.+ . ..||.++..++...| ++.-.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~-~-~~~D~~~~~~~~~~~-~~~~~~ 196 (214)
T cd04196 142 SFNNLLFQNVVTGCTMAFNRELLELALPFPDAD-V-IMHDWWLALLASAFG-KVVFLD 196 (214)
T ss_pred CHHHHHHhCccCCceeeEEHHHHHhhccccccc-c-ccchHHHHHHHHHcC-ceEEcc
Confidence 0 0113346788899999999999999885 2 468999998888744 554433
No 53
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=97.41 E-value=0.00018 Score=55.09 Aligned_cols=84 Identities=11% Similarity=0.016 Sum_probs=54.6
Q ss_pred CcchhhhhhHHHHHHHhcCCccEEEEEeccccccCCCce--eccCCCceeeee--------e-c----cc-------ccc
Q psy6976 3 PFNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNL--YTCPGMPRHMSV--------A-V----DS-------MNY 60 (177)
Q Consensus 3 ~Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~--~~~~~~p~~~s~--------~-~----~~-------~~~ 60 (177)
...++.++|.|+..|.+ ||++|+|.|+.+.++++. .........+.. . . .+ ...
T Consensus 65 n~G~~~a~n~g~~~a~~----d~i~~~D~D~~~~~~~l~~l~~~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (181)
T cd04187 65 NFGQQAALLAGLDHARG----DAVITMDADLQDPPELIPEMLAKWEEGYDVVYGVRKNRKESWLKRLTSKLFYRLINKLS 140 (181)
T ss_pred CCCcHHHHHHHHHhcCC----CEEEEEeCCCCCCHHHHHHHHHHHhCCCcEEEEEecCCcchHHHHHHHHHHHHHHHHHc
Confidence 35688999999999988 999999999999887531 111000000000 0 0 00 001
Q ss_pred cccccccccceeeeeHHHHhhhcCCCCCcc
Q psy6976 61 RLPYASLFGGVCALNKEHFQLVNGFSNEYW 90 (177)
Q Consensus 61 ~~~~~~~~Gg~~~~~~~~f~~vnGfde~f~ 90 (177)
..+.....|+..+++++.+.+++||||.+.
T Consensus 141 ~~~~~~~~~~~~~~~r~~~~~i~~~d~~~~ 170 (181)
T cd04187 141 GVDIPDNGGDFRLMDRKVVDALLLLPERHR 170 (181)
T ss_pred CCCCCCCCCCEEEEcHHHHHHHHhcCCCCc
Confidence 123344567889999999999999999874
No 54
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=97.40 E-value=0.0001 Score=60.07 Aligned_cols=100 Identities=17% Similarity=0.087 Sum_probs=61.3
Q ss_pred hhhHHHHHHHhcCCccEEEEEeccccccCCCceec---cCCCcee--------e-----e--eeccccccc---------
Q psy6976 9 LFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYT---CPGMPRH--------M-----S--VAVDSMNYR--------- 61 (177)
Q Consensus 9 ~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~---~~~~p~~--------~-----s--~~~~~~~~~--------- 61 (177)
.+|.|+..|.+ |+++++|.|++++++.+... ....|.- . + .....+.|.
T Consensus 64 ~~~~~~~~a~~----e~i~~~DaD~~~~~~~l~~l~~~~~~~p~vg~v~g~~~~~~~~~~~~~~~q~~ey~~~~~~~~~~ 139 (244)
T cd04190 64 YFCRVLFPDDP----EFILLVDADTKFDPDSIVQLYKAMDKDPEIGGVCGEIHPMGKKQGPLVMYQVFEYAISHWLDKAF 139 (244)
T ss_pred HHHHHhhcCCC----CEEEEECCCCcCCHhHHHHHHHHHHhCCCEEEEEeeeEEcCCcchhHHHhHheehhhhhhhcccH
Confidence 45667666666 99999999999999964211 1011110 0 0 000001110
Q ss_pred ---ccc-cccccceeeeeHHHHhhhcCCCCCc-----------ccC------CCCchHHHHHHHHcCCeEEe
Q psy6976 62 ---LPY-ASLFGGVCALNKEHFQLVNGFSNEY-----------WGW------GGEDDDMSNRVKAAGLQIIR 112 (177)
Q Consensus 62 ---~~~-~~~~Gg~~~~~~~~f~~vnGfde~f-----------~GW------G~ED~dl~~Rl~~~G~~i~r 112 (177)
... ....|..++++++.+.+++|+...+ .|+ =+||.+|..||..+|+++..
T Consensus 140 ~s~~g~~~~~~G~~~~~R~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ED~~l~~~l~~~G~~~~~ 211 (244)
T cd04190 140 ESVFGFVTCLPGCFSMYRIEALKGDNGGKGPLLDYAYLTNTVDSLHKKNNLDLGEDRILCTLLLKAGPKRKY 211 (244)
T ss_pred HHcCCceEECCCceEEEEehhhcCCccccccchhhccccCcccchHHHHHHhHhcccceeHHHhccCCccEE
Confidence 011 1244677889999999998876421 111 27999999999999998866
No 55
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=97.37 E-value=0.00023 Score=54.99 Aligned_cols=37 Identities=11% Similarity=0.270 Sum_probs=30.6
Q ss_pred cchhhhhhHHHHHHHh-cCCccEEEEEeccccccCCCc
Q psy6976 4 FNRASLFNVGYAEAIK-IREFDCFIFHDVDLIPEDDRN 40 (177)
Q Consensus 4 Fnra~~lN~g~~~a~~-~~~~d~iif~DvD~ip~~~~~ 40 (177)
..|+.++|.|+..|.+ ...+|+++|+|.|+++.++++
T Consensus 62 ~gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~~~p~~l 99 (183)
T cd06438 62 RGKGYALDFGFRHLLNLADDPDAVVVFDADNLVDPNAL 99 (183)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCCChhHH
Confidence 4689999999998862 234699999999999999974
No 56
>KOG3737|consensus
Probab=97.35 E-value=0.00011 Score=64.78 Aligned_cols=49 Identities=29% Similarity=0.494 Sum_probs=45.3
Q ss_pred ccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 66 SLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 66 ~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
...||.+|+.|+-|...|-||+...=||||..||...+++-|-+|...+
T Consensus 332 thAGGLfAInRe~F~ELG~YDpgLqiWGGEnfElSfKIWQCGG~i~fVP 380 (603)
T KOG3737|consen 332 THAGGLFAINREFFFELGLYDPGLQIWGGENFELSFKIWQCGGKILFVP 380 (603)
T ss_pred ccccceeeehHHHHHHhccCCCcceeecCcceeEEEEEEeeCCEEEEEE
Confidence 4579999999999999999999999999999999999999998887754
No 57
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=97.20 E-value=0.00081 Score=63.71 Aligned_cols=107 Identities=19% Similarity=0.171 Sum_probs=69.1
Q ss_pred chhhhhhHHHHHHHh-----cCCccEEEEEeccccccCCCce---eccCC--------Ccee--eeeec-----cccc--
Q psy6976 5 NRASLFNVGYAEAIK-----IREFDCFIFHDVDLIPEDDRNL---YTCPG--------MPRH--MSVAV-----DSMN-- 59 (177)
Q Consensus 5 nra~~lN~g~~~a~~-----~~~~d~iif~DvD~ip~~~~~~---~~~~~--------~p~~--~s~~~-----~~~~-- 59 (177)
.|+.++|.|+..+.. ...++.++++|.|++++|+.+. +.+.. .|.. .+..+ ..|.
T Consensus 133 gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~pd~L~~~~~l~~~~~~VQ~p~~p~~~~~~~~~~~~~~~EFa~~ 212 (727)
T PRK11234 133 SKADCLNNVLDAITQFERSANFAFAGFILHDAEDVISPMELRLFNYLVERKDLIQIPVYPFEREWTHFTSGTYIDEFAEL 212 (727)
T ss_pred CHHHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCCChhHHHHHHhhcCCCCeEeecccCCCccHHHHHHHHHHHHHHHH
Confidence 599999999998743 2367889999999999999753 22211 1110 00000 0110
Q ss_pred --cc------c-cccccccceeee-eH--HHHhhhc---CCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 60 --YR------L-PYASLFGGVCAL-NK--EHFQLVN---GFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 60 --~~------~-~~~~~~Gg~~~~-~~--~~f~~vn---Gfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
.. + ......|..+++ +| +.+.++| +|+.+.. -||.|+..||..+|+++.-.+
T Consensus 213 ~~~~~~~~~~lgg~~~l~G~~~af~Rr~l~al~~~ggg~~~~~~~l---TED~dlg~rL~~~G~~v~f~~ 279 (727)
T PRK11234 213 HGKDVPVREALAGQVPSAGVGTCFSRRAVTALLEDGDGIAFDVQSL---TEDYDIGFRLKEKGMREIFVR 279 (727)
T ss_pred hhhhhHHHHHcCCCcccCCceEEEecccHHHHHHhcCCCCcCCCcc---hHHHHHHHHHHHCCCEEEEcc
Confidence 00 0 012344556888 55 4688998 5877664 499999999999999987754
No 58
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=97.15 E-value=0.00085 Score=52.06 Aligned_cols=47 Identities=32% Similarity=0.538 Sum_probs=39.7
Q ss_pred ccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 66 SLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 66 ~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
...|++++++++.+.+|+||+ ...-.+ ||.|+..||..+|+++...+
T Consensus 71 ~~~G~~~~~r~~~l~~vg~~~-~~~~~~-ED~~l~~~l~~~G~~~~~~~ 117 (193)
T PF13632_consen 71 FLSGSGMLFRREALREVGGFD-DPFSIG-EDMDLGFRLRRAGYRIVYVP 117 (193)
T ss_pred cccCcceeeeHHHHHHhCccc-cccccc-chHHHHHHHHHCCCEEEEec
Confidence 356899999999999999999 333334 99999999999999998765
No 59
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=97.12 E-value=0.00029 Score=66.31 Aligned_cols=107 Identities=16% Similarity=0.159 Sum_probs=68.1
Q ss_pred hhhhHHHHHHHhcCCccEEEEEeccccccCCCceeccC---CCce---------eee-----eeccccc---cc------
Q psy6976 8 SLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTCP---GMPR---------HMS-----VAVDSMN---YR------ 61 (177)
Q Consensus 8 ~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~~~---~~p~---------~~s-----~~~~~~~---~~------ 61 (177)
|+-|.+-........+||++..|.|.++.+|++..... ..|. ... ..+.++. |.
T Consensus 206 KaGNl~~~~~~~~~~~eyivvLDADs~m~~d~L~~lv~~m~~dP~vGlVQt~~~~~n~~slfaR~qqf~~~~y~~~~~~G 285 (691)
T PRK05454 206 KAGNIADFCRRWGGAYDYMVVLDADSLMSGDTLVRLVRLMEANPRAGLIQTLPVAVGADTLFARLQQFATRVYGPLFAAG 285 (691)
T ss_pred cHHHHHHHHHhcCCCcCEEEEEcCCCCCCHHHHHHHHHHHhhCcCEEEEeCCccCcCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 34455433323224679999999999999997421111 0111 000 0011110 00
Q ss_pred -----ccccccccceeeeeHHHHhhhcCCCC--CcccCCCC----chHHHHHHHHcCCeEEecC
Q psy6976 62 -----LPYASLFGGVCALNKEHFQLVNGFSN--EYWGWGGE----DDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 62 -----~~~~~~~Gg~~~~~~~~f~~vnGfde--~f~GWG~E----D~dl~~Rl~~~G~~i~r~~ 114 (177)
.....++|.|..++++.|.+++|.+. ...|||++ |.++..++..+|+++.-.+
T Consensus 286 ~~~w~~~~g~f~G~naIiR~~af~~~~glp~L~g~~p~~~~~LseD~~~a~~l~~~GyrV~~~p 349 (691)
T PRK05454 286 LAWWQGGEGNYWGHNAIIRVKAFAEHCGLPPLPGRGPFGGHILSHDFVEAALMRRAGWGVWLAP 349 (691)
T ss_pred hhhhccCccccccceEEEEHHHHHHhcCCccccccCCCCCCcccHHHHHHHHHHHCCCEEEEcC
Confidence 01234778999999999999999875 56778755 9999999999999987755
No 60
>KOG3738|consensus
Probab=96.70 E-value=0.00042 Score=61.16 Aligned_cols=101 Identities=20% Similarity=0.232 Sum_probs=71.0
Q ss_pred hhhhHHHHHHHhcCCccEEEEEeccccccCCCce------------eccCC----C-------------------ceeee
Q psy6976 8 SLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNL------------YTCPG----M-------------------PRHMS 52 (177)
Q Consensus 8 ~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~------------~~~~~----~-------------------p~~~s 52 (177)
+.|++|+..|.+ .++-|+|.-|-...+++. ..|+- . .-||.
T Consensus 194 rSRvrGAdvA~a----~vltFLDSHcEvN~~WLePLL~Rvaed~trvVsPiiDvIn~dnf~Y~~asadLrGGFDWsLhF~ 269 (559)
T KOG3738|consen 194 RSRVRGADVAQA----TVLTFLDSHCEVNEGWLEPLLERVAEDTTRVVSPIIDVINLDNFSYVGASADLRGGFDWSLHFK 269 (559)
T ss_pred hhhccccccccc----eEEEEEecceeecchhhHHHHHHHhhcccceeecccccccccccccccchhhhcCCcceEEEEE
Confidence 567899999988 999999999876666421 11110 0 00111
Q ss_pred eec---c----cccccccc--cccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHHcCCeEEe
Q psy6976 53 VAV---D----SMNYRLPY--ASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIR 112 (177)
Q Consensus 53 ~~~---~----~~~~~~~~--~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r 112 (177)
... . .-+...|+ ..+.||+++|.|+-|.+.|-||..+.=||||..||..|++.-|-.+.=
T Consensus 270 We~~~~eqr~sr~~Pt~PirtP~iAGGlfvidk~wF~~LGkyd~~mdiWGGEn~ElsfrvW~CGGslEI 338 (559)
T KOG3738|consen 270 WEQMQLEQRESRADPTAPIRTPAIAGGLFVIDKEWFNELGKYDMDMDIWGGENLELSFRVWQCGGSLEI 338 (559)
T ss_pred ehhcCHHHHhhccCCCCcccCccccceeEEecHHHHHHhcccCccccccCCcceEEEEEEEeeCCeeEE
Confidence 000 0 00112233 357899999999999999999999999999999999999999877644
No 61
>PRK10073 putative glycosyl transferase; Provisional
Probab=96.33 E-value=0.01 Score=50.91 Aligned_cols=110 Identities=16% Similarity=0.103 Sum_probs=62.6
Q ss_pred chhhhhhHHHHHHHhcCCccEEEEEeccccccCCCcee--c-cCCCceeee-----------------eeccccc----c
Q psy6976 5 NRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLY--T-CPGMPRHMS-----------------VAVDSMN----Y 60 (177)
Q Consensus 5 nra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~--~-~~~~p~~~s-----------------~~~~~~~----~ 60 (177)
..+.++|.|+..|++ ||++|+|.|..+.++.... . .......+. ...++.. +
T Consensus 72 G~~~arN~gl~~a~g----~yi~flD~DD~~~p~~l~~l~~~~~~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (328)
T PRK10073 72 GVSVARNTGLAVATG----KYVAFPDADDVVYPTMYETLMTMALEDDLDVAQCNADWCFRDTGETWQSIPSDRLRSTGVL 147 (328)
T ss_pred ChHHHHHHHHHhCCC----CEEEEECCCCccChhHHHHHHHHHHhCCCCEEEEccEEEEeCCCcccccccccccccccee
Confidence 467899999999998 9999999999998885310 0 000000000 0000000 0
Q ss_pred ccc-------c-ccccc-ceeeeeHHHHhhhcC--CCCCcccCCCCchHHHHHHHHcCCeEEecCCceeEEe
Q psy6976 61 RLP-------Y-ASLFG-GVCALNKEHFQLVNG--FSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYS 121 (177)
Q Consensus 61 ~~~-------~-~~~~G-g~~~~~~~~f~~vnG--fde~f~GWG~ED~dl~~Rl~~~G~~i~r~~~~~~~~~ 121 (177)
..+ . ..+.. ....+.|.+|.+-+| |++. .-.||.++..++..++-++.-.+.....|.
T Consensus 148 ~~~~~l~~~l~~~~~~~~~~~~l~Rr~~l~~~~~~f~~~---~~~eD~~~~~~~~~~~~~v~~~~~~ly~Yr 216 (328)
T PRK10073 148 SGPDWLRMALSSRRWTHVVWLGVYRRDFIVKNNIKFEPG---LHHQDIPWTTEVMFNALRVRYTEQSLYKYY 216 (328)
T ss_pred chHHHHHHHHhhCCCCccHhHHHHHHHHHHHcCCccCCC---CEeccHHHHHHHHHHCCEEEEECCCEEEEE
Confidence 000 0 00111 112344555555555 4444 346999999999999888887776665554
No 62
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=96.23 E-value=0.016 Score=54.84 Aligned_cols=106 Identities=22% Similarity=0.191 Sum_probs=64.0
Q ss_pred CcchhhhhhHHHHHHHh-----cCCccEEEEEeccccccCCCcee----ccCCCceeeee---e------c-----ccc-
Q psy6976 3 PFNRASLFNVGYAEAIK-----IREFDCFIFHDVDLIPEDDRNLY----TCPGMPRHMSV---A------V-----DSM- 58 (177)
Q Consensus 3 ~Fnra~~lN~g~~~a~~-----~~~~d~iif~DvD~ip~~~~~~~----~~~~~p~~~s~---~------~-----~~~- 58 (177)
|=.|+.++|.|+..+.. ...++.+++||.|-+|+|+...+ .+.....+..+ . + ..|
T Consensus 139 p~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~~~P~~L~~~~~~~~~~~~iQ~pV~~~~~~~~~~l~~~~~~Efa 218 (703)
T PRK15489 139 PTCKADCLNWIIQAIFRYEAGHGIEFAGVILHDSEDVLHPLELKYFNYLLPRKDLVQLPVLSLERKWYEWVAGTYMDEFA 218 (703)
T ss_pred CCCHHHHHHHHHHHHHhhhhhccCccceEEEEcCCCCCChhHHHHHHhhcCCcceeeeeeccCCCccccHHHHHHHHHHH
Confidence 34699999999987622 23466799999999999996421 11111111100 0 0 001
Q ss_pred ---ccccc------ccccccc-eeeeeHHHHhhh---cCCCCCcccCC----CCchHHHHHHHHcCCeEEe
Q psy6976 59 ---NYRLP------YASLFGG-VCALNKEHFQLV---NGFSNEYWGWG----GEDDDMSNRVKAAGLQIIR 112 (177)
Q Consensus 59 ---~~~~~------~~~~~Gg-~~~~~~~~f~~v---nGfde~f~GWG----~ED~dl~~Rl~~~G~~i~r 112 (177)
+..++ ..-..|| .++|+|+.+..+ ||-+ +|. =||-|+..||...|++..-
T Consensus 219 ~~~~~~l~~r~~l~~~ipl~Gv~~~frr~aL~~l~~~gg~~----~~n~~sLTED~Dlg~RL~~~G~r~~f 285 (703)
T PRK15489 219 EWHQKDLVVRESLTGTVPSAGVGTCFSRRALLALMKERGNQ----PFNTSSLTEDYDFSFRLAELGMQEIF 285 (703)
T ss_pred HHhhhHHHHHHHcCCceeccCcceeeeHHHHHHHHHhcCCC----CCCCCCchHhHHHHHHHHHCCCceEE
Confidence 00011 1112344 677888887766 6432 344 3999999999999998765
No 63
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=96.06 E-value=0.013 Score=45.74 Aligned_cols=37 Identities=16% Similarity=0.121 Sum_probs=30.1
Q ss_pred cchhhhhhHHHHHHHhc-------CCccEEEEEeccccccCCCc
Q psy6976 4 FNRASLFNVGYAEAIKI-------REFDCFIFHDVDLIPEDDRN 40 (177)
Q Consensus 4 Fnra~~lN~g~~~a~~~-------~~~d~iif~DvD~ip~~~~~ 40 (177)
-.|+.++|.|+..|.+. ...|+++|+|.|+++.++.+
T Consensus 64 ~Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~~~~l 107 (191)
T cd06436 64 TGKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGRLDPNAL 107 (191)
T ss_pred CCHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCCcCHhHH
Confidence 35899999999988642 13479999999999999974
No 64
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=95.60 E-value=0.014 Score=47.39 Aligned_cols=103 Identities=18% Similarity=0.246 Sum_probs=54.8
Q ss_pred cchhhhhhHHHHHHHhcCCccEEEEEeccccccCC-Cc---e--e------------ccCCCce----eeee--------
Q psy6976 4 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDD-RN---L--Y------------TCPGMPR----HMSV-------- 53 (177)
Q Consensus 4 Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~-~~---~--~------------~~~~~p~----~~s~-------- 53 (177)
++-+.+.|.|++.|.+ +|+||+.-|+.+.+. +. + . .+...|. ..+.
T Consensus 40 ~s~~~~yN~a~~~a~~----~ylvflHqDv~i~~~~~l~~il~~~~~~~~~G~iGvaG~~~~~~~~~~w~~~~~~g~~~~ 115 (217)
T PF13712_consen 40 KSMAAAYNEAMEKAKA----KYLVFLHQDVFIINENWLEDILEIFEEDPNIGMIGVAGSKRLPPNGVWWESPNKVGKVRE 115 (217)
T ss_dssp S-TTTHHHHHGGG--S----SEEEEEETTEE-SSHHHHHHHHHHHHH-TTEEEEESEEEESS-S-TTS---EEEEEETTE
T ss_pred cCHHHHHHHHHHhCCC----CEEEEEeCCeEEcchhHHHHHHHHHhhCCCccEEEeecCCcCCCCCcccccccccccccc
Confidence 6778899999998887 999999999988753 21 0 0 0111111 0000
Q ss_pred --e---------ccccccc-------ccccccccceeeeeHHHHhhhcCCCCC-cccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 54 --A---------VDSMNYR-------LPYASLFGGVCALNKEHFQLVNGFSNE-YWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 54 --~---------~~~~~~~-------~~~~~~~Gg~~~~~~~~f~~vnGfde~-f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
. .....+. .+....=|+.+++.++.+ +|||. |.||-.-|.|+..++..+|.++.-++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~avDg~ll~~~~dv~----~fde~~~~gfH~Ydvd~cl~~~~~G~~v~~~~ 191 (217)
T PF13712_consen 116 YGRIMHGHGPNSAGEVRYGGPRNDPPEEVQAVDGLLLATQKDVP----RFDEDLFTGFHFYDVDQCLEARRAGYRVVVPP 191 (217)
T ss_dssp EEE----E-------------ES-SSEEEEEE-TTEEEEETTB---------SS--SSSSHHHHHHHHHHHTT-EEEE--
T ss_pred cccccccccccccccccccccccCCceeEEEecceEEEEEcccC----CCCccccCCcchHHHHHHHHHHHhCCEEEecC
Confidence 0 0000110 112334467777777777 99999 99999999999999999999986643
No 65
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=95.41 E-value=0.015 Score=42.41 Aligned_cols=33 Identities=24% Similarity=0.189 Sum_probs=27.1
Q ss_pred cchhhhhhHHHHHHHhcCCccEEEEEeccccccCCCc
Q psy6976 4 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRN 40 (177)
Q Consensus 4 Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~ 40 (177)
...+.++|.|+..|.+ +|++|+|.|+++.++++
T Consensus 64 ~g~~~~~n~~~~~a~~----~~i~~ld~D~~~~~~~l 96 (169)
T PF00535_consen 64 LGFSAARNRGIKHAKG----EYILFLDDDDIISPDWL 96 (169)
T ss_dssp SHHHHHHHHHHHH--S----SEEEEEETTEEE-TTHH
T ss_pred ccccccccccccccce----eEEEEeCCCceEcHHHH
Confidence 4678999999999998 89999999999999963
No 66
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=93.92 E-value=0.036 Score=47.62 Aligned_cols=34 Identities=21% Similarity=0.278 Sum_probs=28.5
Q ss_pred hhcCCCCCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 81 LVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 81 ~vnGfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
.+=-|||.|.|+|.--.-...-|..+|+...=.+
T Consensus 242 ~~P~yDErF~~yg~nk~s~~~eL~~~gy~F~VL~ 275 (317)
T PF13896_consen 242 NVPLYDERFRGYGFNKISQIYELCAAGYRFHVLP 275 (317)
T ss_pred CCCCCcccccccccchHHHHHHHHHcCCEEEEcC
Confidence 4456999999999977788888999999987765
No 67
>PF03214 RGP: Reversibly glycosylated polypeptide; InterPro: IPR004901 Alpha-1,4-glucan-protein synthase catalyses the reaction: protein + UDP-D-glucose = alpha-D-glucosyl-protein + UDP The enzyme has a possible role in the synthesis of cell wall polysaccharides in plants []. It is found associated with the cell wall, with the highest concentrations in the plasmodesmata. It is also located in the Golgi apparatus.; GO: 0008466 glycogenin glucosyltransferase activity, 0016758 transferase activity, transferring hexosyl groups, 0007047 cellular cell wall organization, 0030244 cellulose biosynthetic process, 0005618 cell wall, 0030054 cell junction
Probab=93.02 E-value=0.064 Score=46.38 Aligned_cols=33 Identities=33% Similarity=0.521 Sum_probs=30.0
Q ss_pred CcchhhhhhHHHHHHHhcCCccEEEEEeccccccCCC
Q psy6976 3 PFNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDR 39 (177)
Q Consensus 3 ~Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~ 39 (177)
+|.=..+||.|+..|+. +|+|++|-||+|++|.
T Consensus 76 ~~~~~a~R~fGyL~s~~----~yivsiDDD~~P~~D~ 108 (348)
T PF03214_consen 76 PFKGDACRNFGYLVSKK----DYIVSIDDDCLPAKDD 108 (348)
T ss_pred cccccchhhhHhhhccc----ceEEEEccccccccCC
Confidence 57778899999999987 9999999999999885
No 68
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=92.97 E-value=0.19 Score=43.61 Aligned_cols=95 Identities=19% Similarity=0.116 Sum_probs=58.8
Q ss_pred hhhHHHHHHHhcCCccEEEEEeccccccCCCceec--------cCCCceeeeeecccccc--------ccccc-ccc-cc
Q psy6976 9 LFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYT--------CPGMPRHMSVAVDSMNY--------RLPYA-SLF-GG 70 (177)
Q Consensus 9 ~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~--------~~~~p~~~s~~~~~~~~--------~~~~~-~~~-Gg 70 (177)
++|.+|..+. ++++|++|.||++.|+|..|. ..+....+|.-.+ .+. ..-|. .++ |.
T Consensus 88 aln~vF~~~~----~~~vIILEDDl~~sPdFf~yf~~~l~~y~~D~~v~~ISa~Nd-nG~~~~~~~~~~~lyrs~ff~gl 162 (334)
T cd02514 88 ALTQTFNLFG----YSFVIILEDDLDIAPDFFSYFQATLPLLEEDPSLWCISAWND-NGKEHFVDDTPSLLYRTDFFPGL 162 (334)
T ss_pred HHHHHHHhcC----CCEEEEECCCCccCHhHHHHHHHHHHHHhcCCCEEEEEeecc-CCcccccCCCcceEEEecCCCch
Confidence 7777776543 499999999999999985332 1111222332211 111 01122 233 33
Q ss_pred eeeeeHHHHhhhcCCCCCcccCCCCchHHHHHH--HHcCCeEEecC
Q psy6976 71 VCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRV--KAAGLQIIRYP 114 (177)
Q Consensus 71 ~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl--~~~G~~i~r~~ 114 (177)
-.++||+.+.+. ++ .|-.-|.|+..|+ ++.|=.+.||.
T Consensus 163 GWml~r~~W~e~---~~---~wp~~~WD~w~R~~~~rkgr~cirPe 202 (334)
T cd02514 163 GWMLTRKLWKEL---EP---KWPKAFWDDWMRLPEQRKGRECIRPE 202 (334)
T ss_pred HHHHHHHHHHHh---CC---CCCCCChHHhhcchhhhcCCccccCC
Confidence 347899999887 33 5676799999995 56777777774
No 69
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=91.86 E-value=0.1 Score=44.42 Aligned_cols=99 Identities=24% Similarity=0.309 Sum_probs=59.1
Q ss_pred chhhhhhHHHHHHHhcCCccEEEEEecccc-ccCCCceec------cCC-------Cceeeee--ecc--------cc--
Q psy6976 5 NRASLFNVGYAEAIKIREFDCFIFHDVDLI-PEDDRNLYT------CPG-------MPRHMSV--AVD--------SM-- 58 (177)
Q Consensus 5 nra~~lN~g~~~a~~~~~~d~iif~DvD~i-p~~~~~~~~------~~~-------~p~~~s~--~~~--------~~-- 58 (177)
.++.++|.|+..|.+ |+++|+|.|+. +.++++.-. -+. ..+.+.. ... ..
T Consensus 102 Gkg~A~~~g~~~a~g----d~vv~lDaD~~~~~p~~l~~l~~~l~~~~~~~~V~g~~~r~~~~~~~~~~~~~gr~~~~~~ 177 (306)
T PRK13915 102 GKGEALWRSLAATTG----DIVVFVDADLINFDPMFVPGLLGPLLTDPGVHLVKAFYRRPLRVSGGVDATGGGRVTELVA 177 (306)
T ss_pred CHHHHHHHHHHhcCC----CEEEEEeCccccCCHHHHHHHHHHHHhCCCceEEEEEeccccccccccCcCCCCchHHHHH
Confidence 467889999998877 99999999997 666643100 000 0011000 000 00
Q ss_pred ----c--cc--ccccccccceeeeeHHHHhhhcCCCCCcccCCCCchHHHHHHHH-cCC-eEEe
Q psy6976 59 ----N--YR--LPYASLFGGVCALNKEHFQLVNGFSNEYWGWGGEDDDMSNRVKA-AGL-QIIR 112 (177)
Q Consensus 59 ----~--~~--~~~~~~~Gg~~~~~~~~f~~vnGfde~f~GWG~ED~dl~~Rl~~-~G~-~i~r 112 (177)
. +. .......+|..+++|+.+.++. |++ ||| .+.++...+.. .|+ .+..
T Consensus 178 ~~l~~~~~~~l~~i~dp~sG~~a~rr~~l~~l~-~~~---~yg-~e~~~l~~~~~~~g~~~i~~ 236 (306)
T PRK13915 178 RPLLNLLRPELAGFVQPLGGEYAGRRELLESLP-FVP---GYG-VEIGLLIDTLDRLGLDAIAQ 236 (306)
T ss_pred HHHHHHHHHhhhcccCcchHhHHHHHHHHHhCC-CCC---CCe-ehHHHHHHHHHHhCcCceEE
Confidence 0 00 1112344788899999998885 764 566 47888888874 587 5555
No 70
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=91.05 E-value=0.14 Score=43.77 Aligned_cols=34 Identities=21% Similarity=0.336 Sum_probs=29.5
Q ss_pred CCcchhhhhhHHHHHHHhcCCccEEEEEeccccccCCC
Q psy6976 2 HPFNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDR 39 (177)
Q Consensus 2 ~~Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~ 39 (177)
..+.++.++|.|+..|.+ |+++++|.|+...++.
T Consensus 74 ~n~G~~~A~~~G~~~A~g----d~vv~~DaD~q~~p~~ 107 (325)
T PRK10714 74 RNYGQHSAIMAGFSHVTG----DLIITLDADLQNPPEE 107 (325)
T ss_pred CCCCHHHHHHHHHHhCCC----CEEEEECCCCCCCHHH
Confidence 346778999999999988 9999999999988764
No 71
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=90.39 E-value=0.17 Score=40.51 Aligned_cols=32 Identities=16% Similarity=0.018 Sum_probs=28.4
Q ss_pred chhhhhhHHHHHHHhcCCccEEEEEeccccccCCCc
Q psy6976 5 NRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRN 40 (177)
Q Consensus 5 nra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~ 40 (177)
+.+.++|.|+..|.+ |+++++|.|.++.++..
T Consensus 58 g~~~~~n~~~~~a~~----d~vl~lDaD~~~~~~~~ 89 (229)
T cd02511 58 GFGAQRNFALELATN----DWVLSLDADERLTPELA 89 (229)
T ss_pred ChHHHHHHHHHhCCC----CEEEEEeCCcCcCHHHH
Confidence 467889999999888 99999999999998863
No 72
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=87.67 E-value=0.48 Score=40.75 Aligned_cols=103 Identities=13% Similarity=0.152 Sum_probs=65.4
Q ss_pred cchhhhhhHHHHHHHhcCCccEEEEEeccccccCCCce--e-------------ccCCCceeee-----ee---cccc--
Q psy6976 4 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNL--Y-------------TCPGMPRHMS-----VA---VDSM-- 58 (177)
Q Consensus 4 Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~--~-------------~~~~~p~~~s-----~~---~~~~-- 58 (177)
..++.++|.|+..|.+ |+++++|.|....++... . .++.. .+.. .. ..++
T Consensus 148 ~G~~~A~~~Gi~~a~g----d~I~~~DaD~~~~~~~l~~l~~~l~~~~~~~~dvV~GsR-~~~~~~~~~~~~~~~r~~~~ 222 (333)
T PTZ00260 148 KGKGGAVRIGMLASRG----KYILMVDADGATDIDDFDKLEDIMLKIEQNGLGIVFGSR-NHLVDSDVVAKRKWYRNILM 222 (333)
T ss_pred CChHHHHHHHHHHccC----CEEEEEeCCCCCCHHHHHHHHHHHHHhhccCCceEEeec-cccccCcccccCcHHHHHHH
Confidence 4578999999999887 999999999887665320 0 11110 0000 00 0000
Q ss_pred ---c------ccccccccccceeeeeHHHHhhhcCCC-CCcccCCCCchHHHHHHHHcCCeEEecC
Q psy6976 59 ---N------YRLPYASLFGGVCALNKEHFQLVNGFS-NEYWGWGGEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 59 ---~------~~~~~~~~~Gg~~~~~~~~f~~vnGfd-e~f~GWG~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
. ..........|--+++|+.+..+ |. ....+|+ -|.|+..++...|+++...+
T Consensus 223 ~~~~~l~~~~~~~~i~D~~~Gfk~~~r~~~~~i--~~~~~~~~~~-fd~Ell~~a~~~g~~I~EvP 285 (333)
T PTZ00260 223 YGFHFIVNTICGTNLKDTQCGFKLFTRETARII--FPSLHLERWA-FDIEIVMIAQKLNLPIAEVP 285 (333)
T ss_pred HHHHHHHHHHcCCCcccCCCCeEEEeHHHHHHH--hhhccccCcc-chHHHHHHHHHcCCCEEEEc
Confidence 0 01122334456678899998877 32 2445676 58999999999999998876
No 73
>PLN03180 reversibly glycosylated polypeptide; Provisional
Probab=86.41 E-value=0.33 Score=42.16 Aligned_cols=32 Identities=22% Similarity=0.254 Sum_probs=29.1
Q ss_pred CcchhhhhhHHHHHHHhcCCccEEEEEeccccccCC
Q psy6976 3 PFNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDD 38 (177)
Q Consensus 3 ~Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~ 38 (177)
+|+=..+||.|+..|.. +|+|++|-||+|.+|
T Consensus 78 p~~~~a~R~fGyL~s~~----~yivsiDDD~~Pa~d 109 (346)
T PLN03180 78 SFKDSACRCFGYLVSKK----KYIFTIDDDCFVAKD 109 (346)
T ss_pred ccCcccchhhhheeecc----eEEEEECCCCCCCCC
Confidence 57778899999999876 999999999999988
No 74
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=83.67 E-value=0.89 Score=32.78 Aligned_cols=31 Identities=23% Similarity=0.145 Sum_probs=27.5
Q ss_pred cchhhhhhHHHHHHHhcCCccEEEEEeccccccCCC
Q psy6976 4 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDR 39 (177)
Q Consensus 4 Fnra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~ 39 (177)
...+.++|.|+..+.+ |++.|+|.|.+ +++.
T Consensus 69 ~g~~~~~~~~~~~~~~----~~~~~~d~d~~-~~~~ 99 (291)
T COG0463 69 GGLGAARNAGLEYARG----DYIVFLDADDQ-HPPE 99 (291)
T ss_pred CChHHHHHhhHHhccC----CEEEEEccCCC-CCHH
Confidence 4678899999999988 99999999999 8775
No 75
>PLN02893 Cellulose synthase-like protein
Probab=80.38 E-value=7.8 Score=37.20 Aligned_cols=35 Identities=11% Similarity=0.117 Sum_probs=26.8
Q ss_pred chhhhhhHHHHHHHhcCCccEEEEEecccccc-CCC
Q psy6976 5 NRASLFNVGYAEAIKIREFDCFIFHDVDLIPE-DDR 39 (177)
Q Consensus 5 nra~~lN~g~~~a~~~~~~d~iif~DvD~ip~-~~~ 39 (177)
-||=+||.+++.+-.-.+.++|+.+|.|++|. +++
T Consensus 281 ~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~p~~ 316 (734)
T PLN02893 281 FKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQT 316 (734)
T ss_pred cccchHHHHHHhhcccCCCCEEEEecCCcCCCchhH
Confidence 47789999998643334569999999999974 555
No 76
>KOG3765|consensus
Probab=75.30 E-value=1.9 Score=38.29 Aligned_cols=30 Identities=23% Similarity=0.364 Sum_probs=26.3
Q ss_pred hhhhhHHHHHHHhcCCccEEEEEeccccccCCCc
Q psy6976 7 ASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRN 40 (177)
Q Consensus 7 a~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~ 40 (177)
..++|+|-+.|.+ +|+++.|+||+|+..+.
T Consensus 180 Nl~RNvAr~ga~t----~~~l~sD~dm~~S~gl~ 209 (386)
T KOG3765|consen 180 NLMRNVARKGANT----DYMLMSDIDMVPSYGLA 209 (386)
T ss_pred HHHHHHHHhhcCC----CcEEEEeeeeeeccchH
Confidence 4679999998888 99999999999988863
No 77
>PRK12465 xylose isomerase; Provisional
Probab=43.07 E-value=21 Score=32.13 Aligned_cols=18 Identities=39% Similarity=0.802 Sum_probs=16.0
Q ss_pred CCccEEEEEeccccccCC
Q psy6976 21 REFDCFIFHDVDLIPEDD 38 (177)
Q Consensus 21 ~~~d~iif~DvD~ip~~~ 38 (177)
...+|+.|||.|++|+.+
T Consensus 101 LG~~~~~FHD~D~~Peg~ 118 (445)
T PRK12465 101 LGVPYYCFHDIDLAPDAD 118 (445)
T ss_pred hCCCeeeccccccCCCCC
Confidence 567999999999999876
No 78
>PLN02923 xylose isomerase
Probab=42.86 E-value=21 Score=32.37 Aligned_cols=20 Identities=30% Similarity=0.552 Sum_probs=16.8
Q ss_pred cCCccEEEEEeccccccCCC
Q psy6976 20 IREFDCFIFHDVDLIPEDDR 39 (177)
Q Consensus 20 ~~~~d~iif~DvD~ip~~~~ 39 (177)
....+|+.|||+|++|+.+-
T Consensus 134 kLG~~y~cFHD~Dl~Peg~s 153 (478)
T PLN02923 134 KLGVDRWCFHDRDIAPDGKT 153 (478)
T ss_pred HhCCCeEccCccccCCCCCC
Confidence 35679999999999999763
No 79
>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the N-terminal domain of the large subunit of carbamoyl phosphate synthase. This domain can also be found in certain other related proteins. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VA7_A 3OUU_A 3OUZ_B 1W96_B 1W93_A 1ULZ_A 3HB9_C 3HO8_A 3BG5_C 3HBL_A ....
Probab=42.23 E-value=21 Score=25.75 Aligned_cols=32 Identities=22% Similarity=0.382 Sum_probs=26.4
Q ss_pred cCCCCCcccCC--CCchHHHHHHHHcCCeEEecC
Q psy6976 83 NGFSNEYWGWG--GEDDDMSNRVKAAGLQIIRYP 114 (177)
Q Consensus 83 nGfde~f~GWG--~ED~dl~~Rl~~~G~~i~r~~ 114 (177)
.|-+--+-||| .|+.+|..++..+|+++.-|+
T Consensus 73 ~g~~~i~pGyg~lse~~~fa~~~~~~gi~fiGp~ 106 (110)
T PF00289_consen 73 EGADAIHPGYGFLSENAEFAEACEDAGIIFIGPS 106 (110)
T ss_dssp TTESEEESTSSTTTTHHHHHHHHHHTT-EESSS-
T ss_pred hcCcccccccchhHHHHHHHHHHHHCCCEEECcC
Confidence 37888888999 799999999999999987654
No 80
>PF08260 Kinin: Insect kinin peptide; InterPro: IPR013202 This entry represents neuropeptides that are the first members of the insect kinin-family isolated from the American cockroach. Their occurrence in the retrocerebral complex suggests a physiological role as a neurohormone. The C-terminal sequence Phe-X-Ser-Trp-Gly-NH2 characterised the peptides as members of the insect kinin family. Data suggest a possible involvement of insect kinins in water-balance by regulating the osmoregulation. Insect kinins also mediate visceral muscle contractile activity (myotropic activity) []. These peptides have lengths ranging from 6 to 14 amino acids [].
Probab=39.73 E-value=16 Score=14.34 Aligned_cols=7 Identities=29% Similarity=1.037 Sum_probs=4.0
Q ss_pred CCcccCC
Q psy6976 87 NEYWGWG 93 (177)
Q Consensus 87 e~f~GWG 93 (177)
..|..||
T Consensus 2 pafnswg 8 (8)
T PF08260_consen 2 PAFNSWG 8 (8)
T ss_pred ccccccC
Confidence 4566665
No 81
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=38.50 E-value=34 Score=28.94 Aligned_cols=32 Identities=16% Similarity=0.155 Sum_probs=25.0
Q ss_pred hhhhhHHHHHHHhcCCccEEEEEeccccccCCC
Q psy6976 7 ASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDR 39 (177)
Q Consensus 7 a~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~ 39 (177)
|++||--+..|.+ ..-++++++|+|++-.|.-
T Consensus 128 AraRN~LL~~aL~-p~~swVlWlDaDIv~~P~~ 159 (269)
T PF03452_consen 128 ARARNFLLSSALG-PWHSWVLWLDADIVETPPT 159 (269)
T ss_pred HHHHHHHHHhhcC-CcccEEEEEecCcccCChH
Confidence 6788888777775 3458999999999966654
No 82
>TIGR02630 xylose_isom_A xylose isomerase. Members of this family are the enzyme xylose isomerase (5.3.1.5), which interconverts D-xylose and D-xylulose.
Probab=37.08 E-value=24 Score=31.83 Aligned_cols=18 Identities=33% Similarity=0.617 Sum_probs=16.0
Q ss_pred CCccEEEEEeccccccCC
Q psy6976 21 REFDCFIFHDVDLIPEDD 38 (177)
Q Consensus 21 ~~~d~iif~DvD~ip~~~ 38 (177)
...+|+.|||+|++|+.+
T Consensus 90 Lg~~~~~FHD~D~~peg~ 107 (434)
T TIGR02630 90 LGVPYYCFHDRDIAPEGA 107 (434)
T ss_pred hCCCeeccCccccCCCCC
Confidence 567999999999999876
No 83
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=36.47 E-value=24 Score=29.86 Aligned_cols=20 Identities=25% Similarity=0.378 Sum_probs=17.5
Q ss_pred CCccEEEEEeccccccCCCc
Q psy6976 21 REFDCFIFHDVDLIPEDDRN 40 (177)
Q Consensus 21 ~~~d~iif~DvD~ip~~~~~ 40 (177)
.+.||++|.|||++....+.
T Consensus 122 ~e~DYlF~~dvd~~F~~~ig 141 (271)
T cd02515 122 HEVDYLFCMDVDMVFQGPFG 141 (271)
T ss_pred ccCCEEEEeeCCceEeecCC
Confidence 47899999999999998863
No 84
>PRK05474 xylose isomerase; Provisional
Probab=35.96 E-value=29 Score=31.38 Aligned_cols=18 Identities=39% Similarity=0.698 Sum_probs=16.0
Q ss_pred CCccEEEEEeccccccCC
Q psy6976 21 REFDCFIFHDVDLIPEDD 38 (177)
Q Consensus 21 ~~~d~iif~DvD~ip~~~ 38 (177)
...+|+.|||.|++|+.+
T Consensus 91 Lg~~~~~FHD~D~~peg~ 108 (437)
T PRK05474 91 LGVPYYCFHDVDVAPEGA 108 (437)
T ss_pred hCCCeeccCccccCCCCC
Confidence 567999999999999986
No 85
>KOG2943|consensus
Probab=33.81 E-value=18 Score=30.42 Aligned_cols=34 Identities=26% Similarity=0.445 Sum_probs=25.3
Q ss_pred ceeeeeHHHHhh----------hcCCCCCcccCCCCchHHHHHH
Q psy6976 70 GVCALNKEHFQL----------VNGFSNEYWGWGGEDDDMSNRV 103 (177)
Q Consensus 70 g~~~~~~~~f~~----------vnGfde~f~GWG~ED~dl~~Rl 103 (177)
|+-.+++++|.+ -|-+++.|.|+|.||+-|..-|
T Consensus 40 gMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViEL 83 (299)
T KOG2943|consen 40 GMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIEL 83 (299)
T ss_pred cceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEE
Confidence 556688999987 2447788999999996555443
No 86
>KOG2978|consensus
Probab=33.47 E-value=32 Score=28.06 Aligned_cols=97 Identities=20% Similarity=0.197 Sum_probs=56.7
Q ss_pred hhhhhHHHHHHHhcCCccEEEEEeccccccCCCceec-----------------------cCC-C-ceeeeeeccccc-c
Q psy6976 7 ASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYT-----------------------CPG-M-PRHMSVAVDSMN-Y 60 (177)
Q Consensus 7 a~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~~~~~~-----------------------~~~-~-p~~~s~~~~~~~-~ 60 (177)
+.|-=.|+.+|++ |++|+.|+|+--+|.++.-. |++ . .+.+|...+-.. .
T Consensus 77 gtAy~hgl~~a~g----~fiviMDaDlsHhPk~ipe~i~lq~~~~~div~GTRYa~~ggV~gW~mkRk~IS~gAn~la~~ 152 (238)
T KOG2978|consen 77 GTAYIHGLKHATG----DFIVIMDADLSHHPKFIPEFIRLQKEGNYDIVLGTRYAGGGGVYGWDMKRKIISRGANFLARI 152 (238)
T ss_pred hHHHHhhhhhccC----CeEEEEeCccCCCchhHHHHHHHhhccCcceeeeeeEcCCCceecchhhHHHHhhhhHHHHHH
Confidence 3444567777777 99999999998888764100 000 0 000110000000 0
Q ss_pred cc-cccccccceeeeeHHHHhhhc-------CCCCCcccCCCCchHHHHHHHHcCCeEEecCC
Q psy6976 61 RL-PYASLFGGVCALNKEHFQLVN-------GFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPP 115 (177)
Q Consensus 61 ~~-~~~~~~Gg~~~~~~~~f~~vn-------Gfde~f~GWG~ED~dl~~Rl~~~G~~i~r~~~ 115 (177)
-+ |-..-..|.+-+.|++.+.-+ ||. | -.||..|+...|+.|...|.
T Consensus 153 ll~~~~sdltGsFrLykk~vl~~li~e~vSkGyv--f------qmEll~ra~~~~y~IgEvPi 207 (238)
T KOG2978|consen 153 LLNPGVSDLTGSFRLYKKEVLEKLIEESVSKGYV--F------QMELLARARQHGYTIGEVPI 207 (238)
T ss_pred hccCCCccCcceeeeehHHHHHhhHHHhhccchh--h------hHHHHHhccccCceEeecce
Confidence 01 233445677888888876544 443 2 27999999999999887663
No 87
>COG2115 XylA Xylose isomerase [Carbohydrate transport and metabolism]
Probab=32.59 E-value=41 Score=29.63 Aligned_cols=19 Identities=37% Similarity=0.658 Sum_probs=16.2
Q ss_pred CCccEEEEEeccccccCCC
Q psy6976 21 REFDCFIFHDVDLIPEDDR 39 (177)
Q Consensus 21 ~~~d~iif~DvD~ip~~~~ 39 (177)
.+..|+.|||+|+-|+..-
T Consensus 94 L~vpyyCFHD~DvaPeG~~ 112 (438)
T COG2115 94 LGVPYYCFHDVDVAPEGAS 112 (438)
T ss_pred hCCCeEeecccccCCCccc
Confidence 4679999999999998763
No 88
>PF07312 DUF1459: Protein of unknown function (DUF1459); InterPro: IPR009924 This family consists of several hypothetical Caenorhabditis elegans proteins of around 85 residues in length. The function of this family is unknown.
Probab=29.02 E-value=20 Score=24.75 Aligned_cols=14 Identities=29% Similarity=1.175 Sum_probs=10.8
Q ss_pred hcCCCCCcccCCCC
Q psy6976 82 VNGFSNEYWGWGGE 95 (177)
Q Consensus 82 vnGfde~f~GWG~E 95 (177)
.--|+..|||||..
T Consensus 52 AaAYPsv~waWGSN 65 (84)
T PF07312_consen 52 AAAYPSVYWAWGSN 65 (84)
T ss_pred cccCcceeeeeccC
Confidence 34588999999953
No 89
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=28.98 E-value=39 Score=26.42 Aligned_cols=19 Identities=21% Similarity=0.447 Sum_probs=14.9
Q ss_pred CCccEEEEEeccccccCCC
Q psy6976 21 REFDCFIFHDVDLIPEDDR 39 (177)
Q Consensus 21 ~~~d~iif~DvD~ip~~~~ 39 (177)
.++|-++++|+|++...+.
T Consensus 97 ~~~drilyLD~D~lv~~dl 115 (250)
T PF01501_consen 97 PDYDRILYLDADTLVLGDL 115 (250)
T ss_dssp TTSSEEEEE-TTEEESS-S
T ss_pred hhcCeEEEEcCCeeeecCh
Confidence 4679999999999998885
No 90
>PF03414 Glyco_transf_6: Glycosyltransferase family 6; InterPro: IPR005076 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 6 GT6 from CAZY comprises enzymes with three known activities; alpha-1,3-galactosyltransferase (2.4.1.151 from EC); alpha-1,3 N-acetylgalactosaminyltransferase (2.4.1.40 from EC); alpha-galactosyltransferase (2.4.1.37 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane; PDB: 2Y7A_B 2O1G_A 1R82_A 2RJ1_A 3IOJ_B 2RJ4_A 3I0C_A 3SX8_A 1ZJ1_A 3I0E_A ....
Probab=28.02 E-value=32 Score=30.07 Aligned_cols=18 Identities=33% Similarity=0.528 Sum_probs=14.0
Q ss_pred CccEEEEEeccccccCCC
Q psy6976 22 EFDCFIFHDVDLIPEDDR 39 (177)
Q Consensus 22 ~~d~iif~DvD~ip~~~~ 39 (177)
+.||+++.|||++..+++
T Consensus 188 EvDYLFc~dvd~~F~~~v 205 (337)
T PF03414_consen 188 EVDYLFCMDVDMVFQDHV 205 (337)
T ss_dssp H-SEEEEEESSEEE-S-B
T ss_pred cCCEEEEEecceEEeccc
Confidence 469999999999999886
No 91
>PF11735 CAP59_mtransfer: Cryptococcal mannosyltransferase 1 ; InterPro: IPR021047 The capsule of pathogenic fungi is a complex polysaccharide whose formation is determined by a number of enzymes including, most importantly, alpha-1,3-mannosyltransferase 1 [, ]. It is responsible for addition of mannose residues in an alpha-1,3 linkage to a polymannosly precursor.
Probab=27.75 E-value=55 Score=27.12 Aligned_cols=31 Identities=26% Similarity=0.307 Sum_probs=23.1
Q ss_pred hhhhhHHHHHHH-----hcCCccEEEEEeccccccCC
Q psy6976 7 ASLFNVGYAEAI-----KIREFDCFIFHDVDLIPEDD 38 (177)
Q Consensus 7 a~~lN~g~~~a~-----~~~~~d~iif~DvD~ip~~~ 38 (177)
|++||.|..--. ....+|.|||++ |++..+.
T Consensus 92 A~lRN~ALePL~~~~~~~~~~fd~VlfLN-DV~f~~~ 127 (241)
T PF11735_consen 92 AELRNRALEPLYDLARKRGRRFDKVLFLN-DVFFCPE 127 (241)
T ss_pred HHHHhHHHHHHHhhhhccCCCcCEEEEec-CcccCHH
Confidence 789999987655 235789999998 7666543
No 92
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2.4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane
Probab=24.93 E-value=45 Score=29.26 Aligned_cols=26 Identities=35% Similarity=0.581 Sum_probs=20.2
Q ss_pred CCccEEEEEeccccccCCCcee--ccCC
Q psy6976 21 REFDCFIFHDVDLIPEDDRNLY--TCPG 46 (177)
Q Consensus 21 ~~~d~iif~DvD~ip~~~~~~~--~~~~ 46 (177)
.+.|.||+.|+|=||.++.+.+ .|..
T Consensus 177 ~~dDliivSDvDEIP~p~~l~~Lr~cd~ 204 (356)
T PF04724_consen 177 QDDDLIIVSDVDEIPSPETLKFLRWCDG 204 (356)
T ss_pred CCCCEEEEcCcccccCHHHHHHHHhcCC
Confidence 4569999999999999996532 4643
No 93
>PLN02195 cellulose synthase A
Probab=24.81 E-value=61 Score=32.31 Aligned_cols=33 Identities=12% Similarity=0.026 Sum_probs=26.4
Q ss_pred hhhhhhHHHHHHHhcCCccEEEEEeccccccCC
Q psy6976 6 RASLFNVGYAEAIKIREFDCFIFHDVDLIPEDD 38 (177)
Q Consensus 6 ra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~ 38 (177)
||=+||+.++.+.--.+.++|+.+|.|+.+.+.
T Consensus 437 KAGamNallrvSavmTNap~il~lDcDmy~n~s 469 (977)
T PLN02195 437 KAGAENALVRVSAVLTNAPYILNLDCDHYVNNS 469 (977)
T ss_pred ccchhHHHHHHhhhccCCCeEEEecCccccCcH
Confidence 666799999865544566999999999998775
No 94
>PLN02189 cellulose synthase
Probab=24.63 E-value=64 Score=32.35 Aligned_cols=33 Identities=12% Similarity=0.080 Sum_probs=26.9
Q ss_pred hhhhhhHHHHHHHhcCCccEEEEEeccccccCC
Q psy6976 6 RASLFNVGYAEAIKIREFDCFIFHDVDLIPEDD 38 (177)
Q Consensus 6 ra~~lN~g~~~a~~~~~~d~iif~DvD~ip~~~ 38 (177)
||=+||+.++.+.--.+.++|+-+|.|+.+.+.
T Consensus 516 KAGAMNaLlRVSavmTNaPfILNLDCDmY~Nns 548 (1040)
T PLN02189 516 KAGAMNALIRVSAVLTNAPFMLNLDCDHYINNS 548 (1040)
T ss_pred chhhHHHHHHHhhhccCCCeEEEccCccccCch
Confidence 788999999755444567999999999999763
No 95
>KOG3987|consensus
Probab=24.23 E-value=1.3e+02 Score=25.10 Aligned_cols=24 Identities=29% Similarity=0.670 Sum_probs=19.0
Q ss_pred ccceeeeeHHHH---hhhcCCCCCcccCCCCc
Q psy6976 68 FGGVCALNKEHF---QLVNGFSNEYWGWGGED 96 (177)
Q Consensus 68 ~Gg~~~~~~~~f---~~vnGfde~f~GWG~ED 96 (177)
+|.++.++.+|| ++||| ..||.||
T Consensus 87 rGsMFifSe~QF~klL~i~~-----p~w~~~~ 113 (288)
T KOG3987|consen 87 RGSMFIFSEEQFRKLLVIGG-----PAWGQEP 113 (288)
T ss_pred cCceEEecHHHHHHHHhcCC-----CccCCCC
Confidence 568889999998 56787 4688877
Done!