Query psy6977
Match_columns 239
No_of_seqs 126 out of 1198
Neff 10.0
Searched_HMMs 46136
Date Fri Aug 16 23:37:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6977.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6977hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00247 adenosine kinase; Pro 100.0 4.9E-39 1.1E-43 267.7 21.7 236 1-238 86-337 (345)
2 cd01168 adenosine_kinase Adeno 100.0 8.7E-38 1.9E-42 257.1 20.1 221 1-238 75-312 (312)
3 PLN02548 adenosine kinase 100.0 2.6E-37 5.6E-42 256.3 21.2 236 1-238 75-326 (332)
4 KOG2854|consensus 100.0 4.4E-37 9.6E-42 241.5 19.4 236 1-238 86-337 (343)
5 PLN02813 pfkB-type carbohydrat 100.0 1.3E-36 2.9E-41 257.7 20.6 221 1-238 154-394 (426)
6 PRK15074 inosine/guanosine kin 100.0 8.4E-36 1.8E-40 251.5 19.8 221 1-238 113-417 (434)
7 PLN02379 pfkB-type carbohydrat 100.0 1.1E-35 2.4E-40 248.3 19.9 220 1-238 107-344 (367)
8 cd01174 ribokinase Ribokinase 100.0 1.6E-35 3.4E-40 241.5 18.3 223 1-238 56-289 (292)
9 PRK11142 ribokinase; Provision 100.0 8E-36 1.7E-40 244.8 16.6 222 1-237 59-291 (306)
10 PLN02341 pfkB-type carbohydrat 100.0 1.1E-34 2.3E-39 249.4 21.1 223 1-238 139-396 (470)
11 PTZ00292 ribokinase; Provision 100.0 4.1E-35 8.9E-40 242.6 17.1 224 1-238 72-313 (326)
12 cd01172 RfaE_like RfaE encodes 100.0 3.7E-35 8E-40 240.7 15.8 228 1-238 59-297 (304)
13 COG0524 RbsK Sugar kinases, ri 100.0 4.6E-34 1E-38 234.9 20.4 223 1-238 57-296 (311)
14 cd01944 YegV_kinase_like YegV- 100.0 5E-34 1.1E-38 232.4 20.3 217 1-234 55-289 (289)
15 TIGR03828 pfkB 1-phosphofructo 100.0 2E-34 4.3E-39 236.4 17.9 224 1-238 55-290 (304)
16 PLN02967 kinase 100.0 3.7E-34 7.9E-39 246.7 19.9 227 1-238 263-534 (581)
17 COG1105 FruK Fructose-1-phosph 100.0 9.8E-34 2.1E-38 225.2 18.5 224 2-238 57-292 (310)
18 TIGR02152 D_ribokin_bact ribok 100.0 1.2E-33 2.5E-38 230.7 18.6 222 1-237 51-284 (293)
19 cd01166 KdgK 2-keto-3-deoxyglu 100.0 2.3E-33 5.1E-38 228.9 20.3 218 1-235 51-293 (294)
20 PLN02323 probable fructokinase 100.0 3.7E-33 8E-38 231.3 20.8 219 1-237 63-313 (330)
21 cd01167 bac_FRK Fructokinases 100.0 2.6E-33 5.6E-38 228.8 18.4 217 1-236 48-295 (295)
22 TIGR02198 rfaE_dom_I rfaE bifu 100.0 2.6E-33 5.6E-38 230.9 16.9 226 1-237 67-304 (315)
23 PLN02543 pfkB-type carbohydrat 100.0 7.1E-33 1.5E-37 236.6 19.7 226 1-238 192-476 (496)
24 cd01945 ribokinase_group_B Rib 100.0 6.8E-33 1.5E-37 225.2 18.6 213 1-238 56-281 (284)
25 PF00294 PfkB: pfkB family car 100.0 8.5E-34 1.8E-38 232.1 13.0 225 1-239 56-298 (301)
26 cd01940 Fructoselysine_kinase_ 100.0 1.1E-32 2.4E-37 221.6 18.4 209 1-236 42-264 (264)
27 PRK09434 aminoimidazole ribosi 100.0 2.9E-32 6.3E-37 223.5 20.9 217 1-237 48-295 (304)
28 cd01943 MAK32 MAK32 kinase. M 100.0 6.9E-33 1.5E-37 228.9 17.2 224 1-235 51-304 (328)
29 TIGR03168 1-PFK hexose kinase, 100.0 1E-32 2.2E-37 226.1 18.2 224 1-238 55-290 (303)
30 PRK10294 6-phosphofructokinase 100.0 1.2E-32 2.6E-37 226.2 18.2 226 1-238 58-295 (309)
31 KOG2855|consensus 100.0 1.6E-32 3.4E-37 218.3 18.0 223 1-238 66-313 (330)
32 PRK09850 pseudouridine kinase; 100.0 5.8E-33 1.3E-37 228.5 16.2 223 1-238 60-295 (313)
33 cd01942 ribokinase_group_A Rib 100.0 5.4E-32 1.2E-36 219.3 19.4 207 1-236 56-279 (279)
34 cd01164 FruK_PfkB_like 1-phosp 100.0 3.2E-32 6.9E-37 221.8 17.6 221 1-235 56-288 (289)
35 PRK13508 tagatose-6-phosphate 100.0 3.5E-32 7.7E-37 223.4 17.4 221 1-237 56-291 (309)
36 PRK09513 fruK 1-phosphofructok 100.0 5.2E-32 1.1E-36 222.8 18.3 224 1-238 59-294 (312)
37 PRK09954 putative kinase; Prov 100.0 3.8E-32 8.2E-37 227.7 16.0 221 1-236 113-346 (362)
38 cd01947 Guanosine_kinase_like 100.0 1.9E-31 4.1E-36 214.6 19.3 199 1-236 56-265 (265)
39 cd01939 Ketohexokinase Ketohex 100.0 8.1E-32 1.8E-36 219.5 17.3 214 1-235 56-289 (290)
40 TIGR01231 lacC tagatose-6-phos 100.0 8.5E-32 1.8E-36 221.2 17.3 221 1-236 55-290 (309)
41 cd01941 YeiC_kinase_like YeiC- 100.0 1.7E-31 3.7E-36 217.3 16.8 216 1-231 55-287 (288)
42 PRK09813 fructoselysine 6-kina 100.0 3.6E-31 7.9E-36 212.4 14.8 204 1-235 43-259 (260)
43 PRK11316 bifunctional heptose 100.0 8.9E-30 1.9E-34 220.5 14.9 225 1-238 70-303 (473)
44 cd01946 ribokinase_group_C Rib 100.0 9.4E-28 2E-32 194.3 18.9 209 1-236 44-276 (277)
45 PLN02630 pfkB-type carbohydrat 99.9 6E-26 1.3E-30 187.0 17.8 195 1-236 57-278 (335)
46 cd01937 ribokinase_group_D Rib 99.9 6.9E-26 1.5E-30 181.2 17.7 197 1-231 44-254 (254)
47 KOG2947|consensus 99.9 6.3E-23 1.4E-27 154.8 15.3 218 1-235 61-298 (308)
48 COG2870 RfaE ADP-heptose synth 99.9 3.8E-23 8.2E-28 166.7 12.6 222 1-236 70-300 (467)
49 PRK05756 pyridoxamine kinase; 99.8 1.4E-17 3.1E-22 135.3 13.7 149 74-232 72-255 (286)
50 cd01173 pyridoxal_pyridoxamine 99.8 2.5E-17 5.3E-22 131.8 13.5 148 75-232 71-251 (254)
51 cd00287 ribokinase_pfkB_like r 99.7 1.3E-17 2.8E-22 128.1 10.7 123 77-210 58-196 (196)
52 TIGR00687 pyridox_kin pyridoxa 99.7 4.2E-17 9.1E-22 132.6 13.1 148 73-230 71-254 (286)
53 PRK12412 pyridoxal kinase; Rev 99.7 1E-16 2.3E-21 129.0 14.2 145 76-232 72-246 (268)
54 TIGR00097 HMP-P_kinase phospho 99.7 2.6E-16 5.7E-21 125.8 14.8 145 76-232 67-240 (254)
55 PRK12413 phosphomethylpyrimidi 99.7 1.5E-16 3.3E-21 127.2 12.6 146 76-233 68-243 (253)
56 cd01169 HMPP_kinase 4-amino-5- 99.7 9.9E-16 2.1E-20 121.6 14.6 144 76-231 68-240 (242)
57 PRK06427 bifunctional hydroxy- 99.7 1E-15 2.3E-20 123.2 14.1 146 76-233 73-249 (266)
58 PRK08176 pdxK pyridoxal-pyrido 99.7 3.4E-15 7.3E-20 120.9 15.0 147 74-231 86-265 (281)
59 PRK07105 pyridoxamine kinase; 99.7 2.2E-15 4.8E-20 122.4 13.5 147 76-233 75-256 (284)
60 PRK08573 phosphomethylpyrimidi 99.6 2.4E-15 5.2E-20 129.1 13.4 135 90-232 82-244 (448)
61 PRK12616 pyridoxal kinase; Rev 99.6 5.8E-15 1.3E-19 118.9 14.0 145 76-232 74-249 (270)
62 PTZ00344 pyridoxal kinase; Pro 99.5 1.1E-12 2.4E-17 107.1 14.3 108 114-232 135-258 (296)
63 PLN02898 HMP-P kinase/thiamin- 99.5 1.7E-12 3.7E-17 113.3 14.3 146 76-233 78-254 (502)
64 PTZ00347 phosphomethylpyrimidi 99.4 1.1E-12 2.5E-17 114.4 10.5 150 72-232 293-478 (504)
65 cd01171 YXKO-related B.subtili 99.4 1E-11 2.2E-16 99.4 11.8 148 72-233 73-236 (254)
66 PRK09517 multifunctional thiam 99.3 3.3E-11 7.1E-16 109.7 13.9 145 76-232 310-484 (755)
67 COG0351 ThiD Hydroxymethylpyri 99.3 4.2E-11 9E-16 93.9 12.0 144 76-231 72-244 (263)
68 PF08543 Phos_pyr_kin: Phospho 99.3 3.1E-11 6.7E-16 96.0 11.5 144 76-231 60-233 (246)
69 TIGR00196 yjeF_cterm yjeF C-te 99.3 8E-11 1.7E-15 95.1 12.6 148 72-232 88-250 (272)
70 PRK14713 multifunctional hydro 99.3 4.1E-11 8.9E-16 105.2 11.1 108 114-230 153-270 (530)
71 PLN02978 pyridoxal kinase 99.2 3.3E-10 7.1E-15 93.0 13.8 145 77-232 87-267 (308)
72 COG2240 PdxK Pyridoxal/pyridox 99.1 1.1E-09 2.5E-14 86.4 12.4 148 72-231 69-249 (281)
73 cd01170 THZ_kinase 4-methyl-5- 99.1 1.8E-09 3.9E-14 85.5 13.6 150 70-230 43-220 (242)
74 PTZ00493 phosphomethylpyrimidi 98.9 2.4E-08 5.3E-13 81.5 10.5 111 114-232 135-285 (321)
75 KOG2599|consensus 98.7 3.8E-07 8.2E-12 71.0 10.8 140 76-226 81-257 (308)
76 PRK09355 hydroxyethylthiazole 98.5 5.9E-06 1.3E-10 66.4 14.4 147 70-229 48-223 (263)
77 KOG3009|consensus 98.5 3.2E-06 6.8E-11 70.6 11.6 147 75-229 424-597 (614)
78 TIGR00694 thiM hydroxyethylthi 98.3 2.8E-05 6E-10 62.0 12.9 143 70-225 43-214 (249)
79 KOG2598|consensus 98.3 6.6E-05 1.4E-09 62.6 14.6 108 114-230 148-281 (523)
80 PF01256 Carb_kinase: Carbohyd 97.3 0.0045 9.8E-08 49.1 10.8 142 71-225 62-215 (242)
81 PRK10565 putative carbohydrate 96.8 0.026 5.6E-07 49.8 11.9 140 72-224 316-467 (508)
82 COG2145 ThiM Hydroxyethylthiaz 96.2 0.34 7.3E-06 38.4 13.4 139 72-223 51-219 (265)
83 PF02110 HK: Hydroxyethylthiaz 96.1 0.24 5.3E-06 39.2 12.2 139 72-223 45-212 (246)
84 PRK03979 ADP-specific phosphof 95.2 0.48 1E-05 41.0 11.8 30 180-211 426-455 (463)
85 KOG3974|consensus 94.6 1.3 2.9E-05 35.1 11.7 149 72-232 97-267 (306)
86 PRK14039 ADP-dependent glucoki 92.3 5 0.00011 34.9 12.5 22 189-210 426-447 (453)
87 COG0063 Predicted sugar kinase 91.9 1.3 2.9E-05 36.0 8.3 127 73-212 98-239 (284)
88 PRK14038 ADP-dependent glucoki 91.8 2.8 6E-05 36.4 10.4 62 72-133 220-302 (453)
89 TIGR02045 P_fruct_ADP ADP-spec 91.4 5.4 0.00012 34.6 11.8 21 189-209 419-439 (446)
90 PHA00438 hypothetical protein 68.4 4.2 9.1E-05 25.7 1.8 17 195-211 47-63 (81)
91 KOG1615|consensus 65.0 62 0.0013 24.9 8.3 90 71-166 10-113 (227)
92 PF10911 DUF2717: Protein of u 62.8 6.3 0.00014 24.9 1.8 17 195-211 47-63 (77)
93 PRK10076 pyruvate formate lyas 59.9 55 0.0012 25.4 7.1 71 76-149 38-125 (213)
94 KOG0174|consensus 57.2 8.9 0.00019 29.1 2.1 42 195-236 147-189 (224)
95 PF13986 DUF4224: Domain of un 53.1 29 0.00062 19.8 3.3 33 120-163 2-34 (47)
96 PF02659 DUF204: Domain of unk 46.0 59 0.0013 19.8 4.3 21 199-220 4-24 (67)
97 PF04587 ADP_PFK_GK: ADP-speci 42.4 28 0.0006 30.4 3.2 20 189-208 423-442 (444)
98 PRK09444 pntB pyridine nucleot 40.3 67 0.0015 28.1 5.0 68 11-91 327-396 (462)
99 COG1180 PflA Pyruvate-formate 37.5 1.9E+02 0.0042 23.2 7.1 71 76-149 83-170 (260)
100 cd04868 ACT_AK-like ACT domain 36.5 80 0.0017 17.6 4.3 24 8-31 15-38 (60)
101 KOG3361|consensus 35.9 42 0.00091 23.8 2.6 31 194-224 86-117 (157)
102 PF11167 DUF2953: Protein of u 34.3 31 0.00066 20.0 1.6 17 195-211 3-19 (53)
103 PF04252 RNA_Me_trans: Predict 33.9 51 0.0011 25.2 3.0 45 46-99 62-107 (196)
104 cd05014 SIS_Kpsf KpsF-like pro 32.7 1.6E+02 0.0035 20.1 5.4 40 138-183 61-100 (128)
105 PF14748 P5CR_dimer: Pyrroline 32.0 1.2E+02 0.0026 20.5 4.5 32 193-224 11-47 (107)
106 PF04587 ADP_PFK_GK: ADP-speci 31.7 71 0.0015 28.0 4.0 62 72-133 205-294 (444)
107 cd04918 ACT_AK1-AT_2 ACT domai 31.2 1.2E+02 0.0026 18.1 4.2 29 10-38 17-45 (65)
108 COG1282 PntB NAD/NADP transhyd 30.5 59 0.0013 27.6 3.1 68 11-91 329-398 (463)
109 PRK13883 conjugal transfer pro 30.2 1.4E+02 0.003 21.9 4.7 20 6-25 62-81 (151)
110 cd04904 ACT_AAAH ACT domain of 28.8 1.5E+02 0.0032 18.4 4.5 31 12-42 16-48 (74)
111 COG1763 MobB Molybdopterin-gua 28.1 1.4E+02 0.0031 22.1 4.5 76 11-86 20-102 (161)
112 cd08364 FosX FosX, a fosfomyci 27.8 1.6E+02 0.0034 20.4 4.7 45 9-54 78-122 (131)
113 cd04931 ACT_PAH ACT domain of 26.9 1.8E+02 0.0039 19.1 4.4 31 12-42 30-62 (90)
114 PF02700 PurS: Phosphoribosylf 26.8 73 0.0016 20.5 2.5 24 6-29 14-38 (80)
115 PF10087 DUF2325: Uncharacteri 26.6 1.1E+02 0.0024 20.1 3.5 32 72-105 44-75 (97)
116 PRK06444 prephenate dehydrogen 25.5 1.8E+02 0.004 22.3 4.9 24 2-25 4-28 (197)
117 PF01118 Semialdhyde_dh: Semia 25.5 41 0.00089 23.2 1.3 90 1-109 2-96 (121)
118 COG0547 TrpD Anthranilate phos 25.1 4.2E+02 0.0091 22.4 8.4 69 140-214 202-285 (338)
119 PF11469 Ribonucleas_3_2: Ribo 25.0 88 0.0019 21.2 2.6 31 191-221 52-83 (120)
120 PRK06901 aspartate-semialdehyd 25.0 2.8E+02 0.006 23.2 6.1 78 7-109 12-94 (322)
121 PF02885 Glycos_trans_3N: Glyc 23.9 1.4E+02 0.0031 18.0 3.4 28 197-224 32-60 (66)
122 PF07283 TrbH: Conjugal transf 23.2 2.1E+02 0.0046 20.1 4.4 24 5-28 33-56 (121)
123 KOG1301|consensus 22.4 83 0.0018 28.1 2.7 81 87-177 118-210 (621)
124 PF13460 NAD_binding_10: NADH( 22.3 1.8E+02 0.0038 21.3 4.3 86 3-105 3-89 (183)
125 PRK06928 pyrroline-5-carboxyla 21.9 2.6E+02 0.0057 22.5 5.5 35 191-225 168-208 (277)
126 PRK12333 nucleoside triphospha 21.6 1.4E+02 0.003 23.2 3.5 29 196-224 165-193 (204)
127 COG1854 LuxS LuxS protein invo 21.4 1.1E+02 0.0024 22.4 2.8 35 11-46 62-96 (161)
128 PRK09562 mazG nucleoside triph 21.0 1.3E+02 0.0028 24.3 3.4 29 196-224 193-221 (262)
129 PF12854 PPR_1: PPR repeat 20.8 1.4E+02 0.003 15.2 2.7 20 202-221 10-29 (34)
130 TIGR00112 proC pyrroline-5-car 20.7 2.7E+02 0.006 21.9 5.3 36 191-226 148-188 (245)
131 cd04929 ACT_TPH ACT domain of 20.5 2.3E+02 0.005 17.7 4.5 31 12-42 16-48 (74)
132 PF10627 CsgE: Curli assembly 20.4 75 0.0016 21.7 1.7 25 1-26 11-35 (107)
No 1
>PTZ00247 adenosine kinase; Provisional
Probab=100.00 E-value=4.9e-39 Score=267.74 Aligned_cols=236 Identities=43% Similarity=0.722 Sum_probs=193.8
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.||+|.+|+++++.|+++||+++++...+.+|+.++++++ .++|+++.+++++..+++++++.....+.+++++++
T Consensus 86 ig~vG~D~~G~~i~~~l~~~GVd~~~~~~~~~~Tg~~~i~v~--~~~r~~~~~~ga~~~l~~~~i~~~~~~~~l~~~~~v 163 (345)
T PTZ00247 86 VGCVGDDRFAEILKEAAEKDGVEMLFEYTTKAPTGTCAVLVC--GKERSLVANLGAANHLSAEHMQSHAVQEAIKTAQLY 163 (345)
T ss_pred EEEeccchhHHHHHHHHHHcCCeeeccccCCCCcEEEEEEEc--CCCcccccCcchhhcCChHHcCcHHHHHHHhhCCEE
Confidence 578999999999999999999999988655668999998886 358888888888889988887753223468899999
Q ss_pred EEeccccccChHHHHHHHHHhhhCC---CCCh--hh--------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHH
Q psy6977 81 YVSGFFLTVSPESILEVAKVALSCT---IRNI--NY--------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIA 144 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~--p~--------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~ 144 (239)
|++|+.+.++.+.+..+++.+++.| ++|+ |. +.++++++ ++|++|++.|++....+.++.++++
T Consensus 164 ~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~~~Dil~~N~~Ea~~l~g~~~~~~~~~~~~~ 243 (345)
T PTZ00247 164 YLEGFFLTVSPNNVLQVAKHARESGKLFCLNLSAPFISQFFFERLLQVLPYVDILFGNEEEAKTFAKAMKWDTEDLKEIA 243 (345)
T ss_pred EEEEEEecccHHHHHHHHHHHHHcCCEEEEECCcHHHHHHHHHHHHHHHhhCCEEEeCHHHHHHHhhccCCCccCHHHHH
Confidence 9999866677889999999999988 6664 32 22556665 9999999999984333345688888
Q ss_pred HHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHH
Q psy6977 145 LKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224 (239)
Q Consensus 145 ~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~ 224 (239)
+.+.+++.....+++.||||+|++|++++++++.++++++++++.++|||+||||+|+|||++++++|+++++|+++|++
T Consensus 244 ~~l~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~~~vVDTtGAGDaF~agfl~~l~~g~~~~~al~~a~~ 323 (345)
T PTZ00247 244 ARIAMLPKYSGTRPRLVVFTQGPEPTLIATKDGVTSVPVPPLDQEKIVDTNGAGDAFVGGFLAQYANGKDIDRCVEAGHY 323 (345)
T ss_pred HHHHhccccccCCCCEEEEecCCCceEEEECCEEEEEeccccCCCCccCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 77765322000157899999999999999999888888888743359999999999999999999999999999999999
Q ss_pred HHHHHHHhccCcCC
Q psy6977 225 AAQHIIQVSGCTLG 238 (239)
Q Consensus 225 ~a~~~~~~~G~~~~ 238 (239)
+|+.++++.|++++
T Consensus 324 aAa~~v~~~Ga~~~ 337 (345)
T PTZ00247 324 SAQVIIQHNGCTYP 337 (345)
T ss_pred HHHHHHhccCCCCC
Confidence 99999999999876
No 2
>cd01168 adenosine_kinase Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor.The physiological function of AK is associated with the regulation of extracellular adenosine levels and the preservation of intracellular adenylate pools. Adenosine kinase is involved in the purine salvage pathway.
Probab=100.00 E-value=8.7e-38 Score=257.09 Aligned_cols=221 Identities=41% Similarity=0.623 Sum_probs=188.9
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.||+|.+|+.+++.|+++||+++++...+.+|+.+++++++ +++|+++.+++++..+++++++. +.+++++++
T Consensus 75 i~~vG~D~~g~~i~~~l~~~GV~~~~~~~~~~~t~~~~~~~~~-~g~r~~~~~~~~~~~~~~~~~~~----~~l~~~~~v 149 (312)
T cd01168 75 IGRVGDDKLGDFLLKDLRAAGVDTRYQVQPDGPTGTCAVLVTP-DAERTMCTYLGAANELSPDDLDW----SLLAKAKYL 149 (312)
T ss_pred EEEeccChhHHHHHHHHHHCCCccccccCCCCCceEEEEEEcC-CCceeeecccchhhcCChhHCCH----HHHccCCEE
Confidence 5789999999999999999999999988666789999988876 67888888888888888877753 568899999
Q ss_pred EEeccccccChHHHHHHHHHhhhCC---CCCh--hh--------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHH
Q psy6977 81 YVSGFFLTVSPESILEVAKVALSCT---IRNI--NY--------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIA 144 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~--p~--------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~ 144 (239)
|++++.+..+++.+..+++.+++.| .+|+ |. +.++++++ ++|++|++.|++. +..+..+++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~~~d~l~~n~~E~~~l~~~---~~~~~~~~a 226 (312)
T cd01168 150 YLEGYLLTVPPEAILLAAEHAKENGVKIALNLSAPFIVQRFKEALLELLPYVDILFGNEEEAEALAEA---ETTDDLEAA 226 (312)
T ss_pred EEEEEecCCCHHHHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHHHHHHHhhCCEEEeCHHHHHHHhCC---CCCChHHHH
Confidence 9999876666688999999999887 5554 21 22555655 9999999999874 224566777
Q ss_pred HHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccC-CCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHH
Q psy6977 145 LKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQR-LPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGV 223 (239)
Q Consensus 145 ~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~-~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~ 223 (239)
+.+.+. |++.||+|+|++|++++++++.+++|+++ + +++||+||||+|+|||++++++|+++++|+++|+
T Consensus 227 ~~l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~---~vvDttGAGDaf~ag~l~~l~~g~~~~~a~~~a~ 297 (312)
T cd01168 227 LKLLAL------RCRIVVITQGAKGAVVVEGGEVYPVPAIPVE---KIVDTNGAGDAFAGGFLYGLVQGEPLEECIRLGS 297 (312)
T ss_pred HHHHhc------CCCEEEEecCCCCeEEEECCEEEeCCCCCCC---CcccCCchHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 888774 88999999999999999988888888887 6 8999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCcCC
Q psy6977 224 WAAQHIIQVSGCTLG 238 (239)
Q Consensus 224 ~~a~~~~~~~G~~~~ 238 (239)
++|+.++++.|++.+
T Consensus 298 ~~Aa~~v~~~G~~~~ 312 (312)
T cd01168 298 YAAAEVIQQLGPRLP 312 (312)
T ss_pred HHHHHHHhccCCCCC
Confidence 999999999999864
No 3
>PLN02548 adenosine kinase
Probab=100.00 E-value=2.6e-37 Score=256.31 Aligned_cols=236 Identities=49% Similarity=0.827 Sum_probs=185.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.||+|.+|+++++.|+++||+++++...+.+|+.++++++ +++|+++.+.++...+++++++....++.+..++++
T Consensus 75 ig~vG~D~~g~~i~~~L~~~gVd~~~~~~~~~~T~~~~i~~~--~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 152 (332)
T PLN02548 75 MGCIGKDKFGEEMKKCATAAGVNVHYYEDESTPTGTCAVLVV--GGERSLVANLSAANCYKVEHLKKPENWALVEKAKFY 152 (332)
T ss_pred EEEEcCChhHHHHHHHHHHcCCceeeeccCCCCCceEEEEEe--cCCceeeeccchhhcCCHHHhcChhhHhHHhhCCEE
Confidence 578999999999999999999999998766678999888875 567777766666666666555432223567899999
Q ss_pred EEeccccccChHHHHHHHHHhhhCC---CCCh--hh--------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHH
Q psy6977 81 YVSGFFLTVSPESILEVAKVALSCT---IRNI--NY--------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIA 144 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~--p~--------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~ 144 (239)
|++|+.+.++++.+..+++.+++.| ++|+ +. +.++++++ ++|++|+..|++....+.++.++.+
T Consensus 153 ~~~g~~~~~~~~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~ 232 (332)
T PLN02548 153 YIAGFFLTVSPESIMLVAEHAAANNKTFMMNLSAPFICEFFKDQLMEALPYVDFLFGNETEARTFAKVQGWETEDVEEIA 232 (332)
T ss_pred EEEEEEccCCHHHHHHHHHHHHHcCCEEEEECCChhHHHHhHHHHHHHHhhCCEEEecHHHHHHHhCccCCCcccHHHHH
Confidence 9999877777888899999998888 5555 32 22455555 9999999999886444445666666
Q ss_pred HHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHH
Q psy6977 145 LKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224 (239)
Q Consensus 145 ~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~ 224 (239)
+.+.++.+....+++.||+|+|++|++++++++.+++|+.++++.+++||+||||+|+|||++++++|+++++|+++|++
T Consensus 233 ~~l~~~~~~~g~~~~~vvvT~G~~G~~~~~~~~~~~~pa~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~l~eal~~a~a 312 (332)
T PLN02548 233 LKISALPKASGTHKRTVVITQGADPTVVAEDGKVKEFPVIPLPKEKLVDTNGAGDAFVGGFLSQLVQGKDIEECVRAGNY 312 (332)
T ss_pred HHHHHhhhhccccCCEEEEEeCCCcEEEEECCeEEEeccccCCcCccccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 65554211000157899999999999999988888877644333479999999999999999999999999999999999
Q ss_pred HHHHHHHhccCcCC
Q psy6977 225 AAQHIIQVSGCTLG 238 (239)
Q Consensus 225 ~a~~~~~~~G~~~~ 238 (239)
+|+.++++.|+++|
T Consensus 313 aAa~~v~~~G~~~~ 326 (332)
T PLN02548 313 AANVIIQRSGCTYP 326 (332)
T ss_pred HHHHHHhccCCCCC
Confidence 99999999999876
No 4
>KOG2854|consensus
Probab=100.00 E-value=4.4e-37 Score=241.46 Aligned_cols=236 Identities=50% Similarity=0.826 Sum_probs=214.0
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.||.|.+|+++++.+++.||+..+....+.+|+.+.++++ +..|+.+.+-++...++.++++.+++|..++++.++
T Consensus 86 ~GsvG~Dk~ge~l~~~~~~aGv~~~yq~~~d~~TGtCavli~--~~nRSL~anLgAAn~f~~dhl~~~~~~~lveka~v~ 163 (343)
T KOG2854|consen 86 FGSVGKDKFGELLKSKARAAGVNVHYQVKEDGPTGTCAVLIT--GDNRSLCANLGAANCFKVDHLDKEENWALVEKAKVF 163 (343)
T ss_pred EeeccCchHHHHHHHHHHhcCceEEEEeccCCCCceEEEEEe--CCCcchhhccchhhccCHHHhcchhhhhhhhheeEE
Confidence 589999999999999999999999998888889999999998 555999999999999999999888889999999999
Q ss_pred EEeccccccChHHHHHHHHHhhhCC---CCCh--hhHH--------HHhhHH---hcCHHHHHHHHHHcCCCccCHHHHH
Q psy6977 81 YVSGFFLTVSPESILEVAKVALSCT---IRNI--NYLH--------HRFIYL---VLIDFEALAFAKQQNFQTEDLHAIA 144 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~--p~~~--------~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~ 144 (239)
|+.|+.+.++|+.+..+.+.+.+.+ .+|+ |+.. +.+||+ +.|++|++.++....+...+..+.+
T Consensus 164 yv~Gffltv~p~ai~~v~qh~~e~~r~~~lnlsapfI~q~~~~~l~~v~~y~DiifgNe~EA~af~~~~~~~t~dv~eia 243 (343)
T KOG2854|consen 164 YVAGFFLTVSPDAIRKVAQHAAENNRVFTLNLSAPFISQFFKDALDKVLPYADIIFGNEDEAAAFARAHGWETKDVKEIA 243 (343)
T ss_pred EEEEEEEEeChHHHHHHHHHHHHhcchhheeccchhHHHHHHHHHHhhcCcceEEEcCHHHHHHHHHhhCCcccchHHHh
Confidence 9999999999999999999988887 6777 6654 555666 9999999999998888888888888
Q ss_pred HHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHH
Q psy6977 145 LKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224 (239)
Q Consensus 145 ~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~ 224 (239)
.......+.+....+.+++|.|.++++...++..+..|..+++.++++||+||||+|++||++++.+|.++++|++.|..
T Consensus 244 ~~~~~~~k~~~~~~r~vvit~g~~~~i~~~~~~v~~~~v~~~~~~~ivDtnGAGDaFvgGFl~~l~qg~~l~~cir~g~~ 323 (343)
T KOG2854|consen 244 LKLSALPKVNGTRPRTVVITQGPDPVIVAEDGKVTAYPVLPLPVEEIVDTNGAGDAFVGGFLSQLVQGKSLEECIRAGSY 323 (343)
T ss_pred hHhhccccccccccceEEEccCCCceEEecCCceEEeccccccceeeeeCCCchHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 88888777666678899999999999999998888888888888899999999999999999999999999999999999
Q ss_pred HHHHHHHhccCcCC
Q psy6977 225 AAQHIIQVSGCTLG 238 (239)
Q Consensus 225 ~a~~~~~~~G~~~~ 238 (239)
+|+.++...|+..|
T Consensus 324 aa~~vi~~~G~~~p 337 (343)
T KOG2854|consen 324 AASHVIRRVGCTVP 337 (343)
T ss_pred HhhheeeccCCCCC
Confidence 99999999999876
No 5
>PLN02813 pfkB-type carbohydrate kinase family protein
Probab=100.00 E-value=1.3e-36 Score=257.72 Aligned_cols=221 Identities=21% Similarity=0.247 Sum_probs=184.1
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.||+|.+|+++++.|+++||++.++.+.+.+|+.+++++++ +++|+++.+.+++..++++++.. +.+++++++
T Consensus 154 ig~VG~D~~G~~i~~~L~~~GVd~~~~~~~~~~Tg~~~ilv~~-~gertii~~~Ga~~~l~~~~~~~----~~i~~adiv 228 (426)
T PLN02813 154 AGSVGSDPLGDFYRTKLRRANVHFLSQPVKDGTTGTVIVLTTP-DAQRTMLSYQGTSSTVNYDSCLA----SAISKSRVL 228 (426)
T ss_pred EEEeCCChHHHHHHHHHHHcCCcccceecCCCCceEEEEEEcC-CCCceeeeccCchhhCCccccCH----HHHhcCCEE
Confidence 5789999999999999999999999887666789999888876 67888888888777776655432 678899999
Q ss_pred EEeccccccCh--HHHHHHHHHhhhCC---CCCh-h---------hHH-HHhhHH---hcCHHHHHHHHHHcCCCccCHH
Q psy6977 81 YVSGFFLTVSP--ESILEVAKVALSCT---IRNI-N---------YLH-HRFIYL---VLIDFEALAFAKQQNFQTEDLH 141 (239)
Q Consensus 81 ~~~g~~~~~~~--~~~~~~~~~~~~~g---~~~~-p---------~~~-~~~~~~---~~n~~E~~~l~~~~~~~~~~~~ 141 (239)
|++|+...++. +.+..+++.+++.| ++|+ + .++ .+++++ ++|++|+..|++.. ..++.+
T Consensus 229 ~l~g~~~~~~~~~~~~~~~~~~ak~~g~~v~~d~s~~~~~~~~~~~l~~~ll~~vDil~~Ne~Ea~~l~g~~--~~~~~~ 306 (426)
T PLN02813 229 VVEGYLWELPQTIEAIAQACEEAHRAGALVAVTASDVSCIERHRDDFWDVMGNYADILFANSDEARALCGLG--SEESPE 306 (426)
T ss_pred EEEeeecCCCchHHHHHHHHHHHHHcCCEEEEECCCcchhhhhHHHHHHHHHhcCCEEEeCHHHHHHHhCCC--CCCCHH
Confidence 99997655443 67888999999888 5554 2 233 333555 99999999998752 224567
Q ss_pred HHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCC-CHHHHHH
Q psy6977 142 AIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGE-PLSVCIE 220 (239)
Q Consensus 142 ~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~-~~~~a~~ 220 (239)
++.+.+.+ +++.||||+|++|++++++++.+++|++++ ++|||+||||+|+|||++++++|+ +++++++
T Consensus 307 ~a~~~L~~-------~~~~VVVT~G~~Ga~~~~~~~~~~~pa~~v---~vVDTtGAGDAF~Agfl~~l~~G~~~l~~al~ 376 (426)
T PLN02813 307 SATRYLSH-------FCPLVSVTDGARGSYIGVKGEAVYIPPSPC---VPVDTCGAGDAYAAGILYGLLRGVSDLRGMGE 376 (426)
T ss_pred HHHHHHHc-------CCCEEEEEeCCCCeEEEECCEEEEeCCCCC---CcccCCChHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 77766653 689999999999999999998889998887 899999999999999999999999 9999999
Q ss_pred HHHHHHHHHHHhccCcCC
Q psy6977 221 CGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 221 ~a~~~a~~~~~~~G~~~~ 238 (239)
+|+++|+.++++.|++.+
T Consensus 377 ~A~a~Aa~~v~~~Ga~~~ 394 (426)
T PLN02813 377 LAARVAATVVGQQGTRLR 394 (426)
T ss_pred HHHHHHHHHHcccCCCcC
Confidence 999999999999999875
No 6
>PRK15074 inosine/guanosine kinase; Provisional
Probab=100.00 E-value=8.4e-36 Score=251.49 Aligned_cols=221 Identities=14% Similarity=0.223 Sum_probs=180.0
Q ss_pred CCcccCC-chHHHHHHHHH--hcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccce
Q psy6977 1 MGAVGKD-NYSDILESKAS--EFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNA 77 (239)
Q Consensus 1 i~~vG~D-~~g~~i~~~l~--~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~ 77 (239)
+|+||+| ++|+++++.|+ +.||+++++...+.+|+.+++++++ +++|+++.+.+++..+++++++. ..++++
T Consensus 113 ig~VGdDd~~G~~~~~~L~~~~~GVdt~~v~~~~~~TG~~~VlV~~-dGeRt~~t~~GA~~~Lt~edld~----~~i~~a 187 (434)
T PRK15074 113 LGVMSSNIEIGSYAYRYLCNTSSRTDLNYLQGVDGPIGRCFTLISE-DGERTFAISPGHMNQLRPESIPE----DVIAGA 187 (434)
T ss_pred EEEeCCCHHHHHHHHHHhhhhhCCccCcceEEcCCCCEEEEEEECC-CCCEEEEEecChhhcCChhHCCH----hHhccC
Confidence 5799999 79999999997 6899999987655689999999987 78999988889989999988874 678999
Q ss_pred eEEEEeccccc-----cChHHHHHHHHHhhhCC---CCCh--hh-------HH--HHhhHH---hcCHHHHHHHHHHcCC
Q psy6977 78 EYYYVSGFFLT-----VSPESILEVAKVALSCT---IRNI--NY-------LH--HRFIYL---VLIDFEALAFAKQQNF 135 (239)
Q Consensus 78 ~~~~~~g~~~~-----~~~~~~~~~~~~~~~~g---~~~~--p~-------~~--~~~~~~---~~n~~E~~~l~~~~~~ 135 (239)
+++|++|+.+. ..++.+..+++.+++.| .+|+ +. .+ .+++++ ++|++|+..|++.
T Consensus 188 ~ilyl~Gy~l~~~~~~~~~~a~~~al~~Ake~G~~VslD~s~~~~v~~~~~~~~e~l~~~vDILf~NeeEa~~LtG~--- 264 (434)
T PRK15074 188 SALVLTAYLVRCKPGEPMPEATMKAIEYAKKHNVPVVLTLGTKFVIEDNPQWWQEFLKEHVSILAMNEDEAEALTGE--- 264 (434)
T ss_pred CEEEEeeeehhcccCCCcHHHHHHHHHHHHHcCCEEEEECcchhhccccHHHHHHHHHhcCCEEEcCHHHHHHHhCC---
Confidence 99999998754 23577889999999998 5555 21 11 233344 9999999999875
Q ss_pred CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCe-------E------------------------------
Q psy6977 136 QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGK-------T------------------------------ 178 (239)
Q Consensus 136 ~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~-------~------------------------------ 178 (239)
++++++++.+.+ +++.||||+|++|++++..++ .
T Consensus 265 --~d~eea~~~L~~-------~~~~VVVTlG~~Ga~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (434)
T PRK15074 265 --SDPLLASDKALD-------WVDLVLCTAGPIGLYMAGYTEDEAKRETQHPLLPGAIAEFNRYEFSRAMRKKDCQNPLR 335 (434)
T ss_pred --CCHHHHHHHHHc-------CCCEEEEEECCCCEEEEecccccccCceeeeccccccccccchhcccchhccccccccc
Confidence 578888887775 468999999999999965221 1
Q ss_pred --EEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCC--------------------CHHHHHHHHHHHHHHHHHhccCc
Q psy6977 179 --TEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGE--------------------PLSVCIECGVWAAQHIIQVSGCT 236 (239)
Q Consensus 179 --~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~--------------------~~~~a~~~a~~~a~~~~~~~G~~ 236 (239)
.+++++.+.+.++||||||||+|+|||+|+|.+|+ ++.+|+++|+.+|+.++++.|++
T Consensus 336 ~~~~~~~~~~~~~~~vDttGAGD~f~~gfl~~l~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~vi~~~G~~ 415 (434)
T PRK15074 336 VYSHIAPYMGGPEKIMNTNGAGDGALSALLHDITANSYHRSNVPNSSKHKRTYLTYSSLAQVCKYANRVSYEVLNQHSPR 415 (434)
T ss_pred cccccCcccCCCCcceeCCCcHHHHHHHHHHHHHCCCcccccccccccccccccccCCHHHHHHHHHHHHHHHHhhcCCC
Confidence 15666611123799999999999999999999997 89999999999999999999997
Q ss_pred CC
Q psy6977 237 LG 238 (239)
Q Consensus 237 ~~ 238 (239)
++
T Consensus 416 ~~ 417 (434)
T PRK15074 416 LS 417 (434)
T ss_pred CC
Confidence 65
No 7
>PLN02379 pfkB-type carbohydrate kinase family protein
Probab=100.00 E-value=1.1e-35 Score=248.27 Aligned_cols=220 Identities=21% Similarity=0.295 Sum_probs=180.1
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|+||+|.+|+++++.|++.||+++++.+.+.+|+.+++++++ +++|++..+.++...++++++.. +.+++++++
T Consensus 107 ig~VG~D~~G~~~~~~L~~~GI~~~~~~~~~~~Tg~~~v~v~~-dgert~~~~lg~~~~l~~~~~~~----~~~~~~~~v 181 (367)
T PLN02379 107 IGACGDDEQGKLFVSNMGFSGVDLSRLRAKKGPTAQCVCLVDA-LGNRTMRPCLSSAVKLQADELTK----EDFKGSKWL 181 (367)
T ss_pred EEEeCCChhHHHHHHHHHHcCCCccCcccCCCCCceEEEEECC-CCCccccCCccccccCChhHCCH----HHHhcCCEE
Confidence 5789999999999999999999999887666689999998886 67787766556666676666653 567899999
Q ss_pred EEeccccccChHHHHHHHHHhhhCC---CCCh----------hhHHHHhh--HH---hcCHHHHHHHHHHcCCCccCHHH
Q psy6977 81 YVSGFFLTVSPESILEVAKVALSCT---IRNI----------NYLHHRFI--YL---VLIDFEALAFAKQQNFQTEDLHA 142 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~----------p~~~~~~~--~~---~~n~~E~~~l~~~~~~~~~~~~~ 142 (239)
|++ +. ..+++.+.++++.+++.| .+|+ +.++++++ ++ ++|++|+..+++.. ..++.++
T Consensus 182 ~v~-~~-~~~~~~~~~~~~~A~~~g~~v~lD~s~~~~v~~~r~~l~~ll~~~~vDilf~Ne~Ea~~l~~~~--~~~~~~~ 257 (367)
T PLN02379 182 VLR-YG-FYNLEVIEAAIRLAKQEGLSVSLDLASFEMVRNFRSPLLQLLESGKIDLCFANEDEARELLRGE--QESDPEA 257 (367)
T ss_pred EEE-cc-cCCHHHHHHHHHHHHHcCCEEEEeccchhhhhhhhHHHHHHhhcCCccEEEcCHHHHHHHhcCC--CCCCHHH
Confidence 998 42 256788999999999988 4444 33455654 44 99999999998641 1245666
Q ss_pred HHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHH
Q psy6977 143 IALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECG 222 (239)
Q Consensus 143 ~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a 222 (239)
+.+.+.+ +++.++||+|++|++++++++.++++++++ .++|||+||||+|+|||+|++++|+++++|+++|
T Consensus 258 ~~~~l~~-------~~~~vvvT~G~~Ga~~~~~~~~~~v~a~~~--~~vVDTtGAGDaFaagfl~gl~~G~~l~~a~~~g 328 (367)
T PLN02379 258 ALEFLAK-------YCNWAVVTLGSKGCIARHGKEVVRVPAIGE--TNAVDATGAGDLFASGFLYGLIKGLSLEECCKVG 328 (367)
T ss_pred HHHHHHh-------cCCEEEEEECCCCeEEEECCEEEEecCCCC--CCcccCCChhHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 6655543 689999999999999999988888888763 2799999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCcCC
Q psy6977 223 VWAAQHIIQVSGCTLG 238 (239)
Q Consensus 223 ~~~a~~~~~~~G~~~~ 238 (239)
+.+|+.++++.|++++
T Consensus 329 ~~aAa~vi~~~G~~~~ 344 (367)
T PLN02379 329 ACSGGSVVRALGGEVT 344 (367)
T ss_pred HHHHHHHHhccCCCCC
Confidence 9999999999999864
No 8
>cd01174 ribokinase Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution.
Probab=100.00 E-value=1.6e-35 Score=241.53 Aligned_cols=223 Identities=25% Similarity=0.333 Sum_probs=184.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|.||+|.+|+.+++.|+++||+++++.+ .+.+|+.++++++. +++|+++.+.++...+++++++. ....++.+++
T Consensus 56 ~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 132 (292)
T cd01174 56 IGAVGDDAFGDELLENLREEGIDVSYVEVVVGAPTGTAVITVDE-SGENRIVVVPGANGELTPADVDA--ALELIAAADV 132 (292)
T ss_pred EEEEcCCccHHHHHHHHHHcCCCceEEEEcCCCCceeEEEEEcC-CCceEEEEeCCCCCCCCHHHHHH--HHHhcccCCE
Confidence 57899999999999999999999999965 46689999888876 57788877776665665544432 3356789999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-h---hHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhc
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-N---YLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISN 149 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p---~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~ 149 (239)
+++++ ..+.+.+..+++.+++.| ++|+ + ...++++++ ++|++|+..|++....+.++..++++.+.+
T Consensus 133 v~~~~---~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~ 209 (292)
T cd01174 133 LLLQL---EIPLETVLAALRAARRAGVTVILNPAPARPLPAELLALVDILVPNETEAALLTGIEVTDEEDAEKAARLLLA 209 (292)
T ss_pred EEEeC---CCCHHHHHHHHHHHHhcCCEEEEeCCCcCcCcHHHHhhCCEEeeCHHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 99964 345678889999999888 5666 2 234667765 999999999988644334456677777777
Q ss_pred CCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy6977 150 LPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHI 229 (239)
Q Consensus 150 ~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~ 229 (239)
. |++.||+|+|++|++++++++.++++++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.+
T Consensus 210 ~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~---~~vdt~GaGD~F~ag~l~~l~~g~~~~~al~~a~~~Aa~~ 280 (292)
T cd01174 210 K------GVKNVIVTLGAKGALLASGGEVEHVPAFKV---KAVDTTGAGDTFIGALAAALARGLSLEEAIRFANAAAALS 280 (292)
T ss_pred c------CCCEEEEEeCCCceEEEeCCceEEecCCCc---ccCCCCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 4 899999999999999999888888888887 8999999999999999999999999999999999999999
Q ss_pred HHhccCcCC
Q psy6977 230 IQVSGCTLG 238 (239)
Q Consensus 230 ~~~~G~~~~ 238 (239)
+++.|+..+
T Consensus 281 ~~~~G~~~~ 289 (292)
T cd01174 281 VTRPGAQPS 289 (292)
T ss_pred hcCcCCCCC
Confidence 999998754
No 9
>PRK11142 ribokinase; Provisional
Probab=100.00 E-value=8e-36 Score=244.83 Aligned_cols=222 Identities=23% Similarity=0.308 Sum_probs=182.1
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|.||+|.+|+.+++.|+++||+++++.+ ++.+|+.++++++. +++|+++.++++...+++++++. ..+.+.++++
T Consensus 59 ~~~vG~D~~g~~i~~~L~~~gV~~~~i~~~~~~~t~~~~~~~~~-~g~r~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~ 135 (306)
T PRK11142 59 IACVGDDSIGESMRQQLAKDGIDTAPVSVIKGESTGVALIFVND-EGENSIGIHAGANAALTPALVEA--HRELIANADA 135 (306)
T ss_pred EEEECCChhHHHHHHHHHHcCCChhhEEEcCCCCCCEEEEEECC-CCCEEEEEeCCccccCCHHHHHH--HHhhhccCCE
Confidence 57899999999999999999999999985 45689999888876 67788777777666676654432 2356789999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-h---hHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhc
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-N---YLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISN 149 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p---~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~ 149 (239)
+++++ ..+.+.+.++++.+++.| ++|+ + ...++++++ ++|++|+..+++....+.++..++++.+.+
T Consensus 136 v~~~~---~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~dil~~n~~Ea~~l~g~~~~~~~~~~~~~~~l~~ 212 (306)
T PRK11142 136 LLMQL---ETPLETVLAAAKIAKQHGTKVILNPAPARELPDELLALVDIITPNETEAEKLTGIRVEDDDDAAKAAQVLHQ 212 (306)
T ss_pred EEEeC---CCCHHHHHHHHHHHHHcCCEEEEECCCCcccCHHHHhhCCEEcCCHHHHHHHhCCCCCChHHHHHHHHHHHH
Confidence 99964 335677888999999888 4555 2 223566665 999999999987633333456677777776
Q ss_pred CCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy6977 150 LPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHI 229 (239)
Q Consensus 150 ~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~ 229 (239)
. |++.||+|+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.+
T Consensus 213 ~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDt~GAGDaF~Agfi~~l~~g~~~~~al~~a~~~Aa~~ 283 (306)
T PRK11142 213 K------GIETVLITLGSRGVWLSENGEGQRVPGFRV---QAVDTIAAGDTFNGALVTALLEGKPLPEAIRFAHAAAAIA 283 (306)
T ss_pred h------CCCeEEEEECCCcEEEEeCCcceeccCCCc---ccccCCCchhHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 4 899999999999999998888888888887 7999999999999999999999999999999999999999
Q ss_pred HHhccCcC
Q psy6977 230 IQVSGCTL 237 (239)
Q Consensus 230 ~~~~G~~~ 237 (239)
+++.|++.
T Consensus 284 ~~~~G~~~ 291 (306)
T PRK11142 284 VTRKGAQP 291 (306)
T ss_pred cCCCcccc
Confidence 99999864
No 10
>PLN02341 pfkB-type carbohydrate kinase family protein
Probab=100.00 E-value=1.1e-34 Score=249.35 Aligned_cols=223 Identities=20% Similarity=0.226 Sum_probs=176.9
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCC---------CCceeEEEEEecCCCceeEeechhhhhccCCCCCCC--ch
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDT---------EPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHV--PE 69 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~---------~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~--~~ 69 (239)
+|+||+|.+|+++++.|+++||+++++...+ .+|+.+++++++ ++++.++...........+.+.. .+
T Consensus 139 ig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~~~~~~~~~T~~~~vlvd~-~ger~~~~~~~~~~~~~~~~~~~l~~~ 217 (470)
T PLN02341 139 IGHVGDEIYGKFLLDVLAEEGISVVGLIEGTDAGDSSSASYETLLCWVLVDP-LQRHGFCSRADFGPEPAFSWISKLSAE 217 (470)
T ss_pred EEEecCcHHHHHHHHHHHHcCCeeeEEEecCccccccccCCCceeEEEEEcC-CCCceeeeccccccccchhhhhcccHH
Confidence 5889999999999999999999999987542 468899999886 55665443221111111111111 12
Q ss_pred hhhcccceeEEEEeccccc-cChHHHHHHHHHhhhCC---CCCh-hh--------------HHHHhhHH---hcCHHHHH
Q psy6977 70 NNKLIQNAEYYYVSGFFLT-VSPESILEVAKVALSCT---IRNI-NY--------------LHHRFIYL---VLIDFEAL 127 (239)
Q Consensus 70 ~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~-p~--------------~~~~~~~~---~~n~~E~~ 127 (239)
..+.+++++++|++|+.+. ++.+.+..+++.+++.| ++|+ +. +.++++++ ++|++|+.
T Consensus 218 ~~~~l~~adiv~lsg~~~~~~~~~~~~~~~~~Ak~~g~~V~~Dp~~~~~~~~~~~~~~~~~l~~~L~~~Dil~~Ne~Ea~ 297 (470)
T PLN02341 218 AKMAIRQSKALFCNGYVFDELSPSAIASAVDYAIDVGTAVFFDPGPRGKSLLVGTPDERRALEHLLRMSDVLLLTSEEAE 297 (470)
T ss_pred HHhhhhcCCEEEEeceeCCcCCHHHHHHHHHHHHHcCCEEEEeCCCcccccccChHHHHHHHHHHHhhCCEEEecHHHHH
Confidence 3367889999999998653 67888999999999888 5555 21 22555655 99999999
Q ss_pred HHHHHcCCCccCHHHHHHHHhcCCCCCCCC--ceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHH
Q psy6977 128 AFAKQQNFQTEDLHAIALKISNLPKQNPNR--ERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGF 205 (239)
Q Consensus 128 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g--~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~ 205 (239)
.+++. ++.+++++.+.+. | .+.||||+|++|++++++++.+++|++++ +++||+||||+|+|||
T Consensus 298 ~l~g~-----~~~~~a~~~l~~~------g~~~k~VVVTlG~~Ga~~~~~~~~~~vpa~~v---~vVDTtGAGDaF~Agf 363 (470)
T PLN02341 298 ALTGI-----RNPILAGQELLRP------GIRTKWVVVKMGSKGSILVTRSSVSCAPAFKV---NVVDTVGCGDSFAAAI 363 (470)
T ss_pred HHhCC-----CCHHHHHHHHHhc------CCCCCEEEEeeCCCCeEEEECCeeEEeCCCCc---CCCCCcCccHHHHHHH
Confidence 99875 5677888887753 5 58999999999999999988889999888 8999999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhccCcCC
Q psy6977 206 LSQLIKGEPLSVCIECGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 206 ~~~l~~g~~~~~a~~~a~~~a~~~~~~~G~~~~ 238 (239)
++++++|+++++|+++|+++|+.++++.|++.+
T Consensus 364 l~gll~G~~l~eal~~A~a~aA~~v~~~Ga~~~ 396 (470)
T PLN02341 364 ALGYIHNLPLVNTLTLANAVGAATAMGCGAGRN 396 (470)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHcCcCCCCC
Confidence 999999999999999999999999999998743
No 11
>PTZ00292 ribokinase; Provisional
Probab=100.00 E-value=4.1e-35 Score=242.59 Aligned_cols=224 Identities=21% Similarity=0.299 Sum_probs=179.8
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccc-ee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQN-AE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~-~~ 78 (239)
+|.||+|.+|+.+++.|+++||+++++.+ .+.+|+.+++++++.+++|+++.+++++..+++++++. ....+.+ ++
T Consensus 72 is~vG~D~~g~~i~~~l~~~GI~~~~~~~~~~~~t~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~--~~~~i~~~~~ 149 (326)
T PTZ00292 72 VGMVGTDGFGSDTIKNFKRNGVNTSFVSRTENSSTGLAMIFVDTKTGNNEIVIIPGANNALTPQMVDA--QTDNIQNICK 149 (326)
T ss_pred EEEECCChhHHHHHHHHHHcCCChhhEEEcCCCCCcEEEEEEeCCCCceEEEEeCCccccCCHHHHHH--HHHHhhhhCC
Confidence 57899999999999999999999999965 56689999998874477888887777666676655542 1244566 89
Q ss_pred EEEEeccccccChHHHHHHHHHhhhCC---CCCh---h------hHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHH
Q psy6977 79 YYYVSGFFLTVSPESILEVAKVALSCT---IRNI---N------YLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAI 143 (239)
Q Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~---p------~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~ 143 (239)
++++++ ..+.+...++++.+++.| ++|+ + .+.++++++ ++|++|+..+++....+.++..++
T Consensus 150 ~~~~~~---~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~l~~~dii~~n~~E~~~l~g~~~~~~~~~~~~ 226 (326)
T PTZ00292 150 YLICQN---EIPLETTLDALKEAKERGCYTVFNPAPAPKLAEVEIIKPFLKYVSLFCVNEVEAALITGMEVTDTESAFKA 226 (326)
T ss_pred EEEECC---CCCHHHHHHHHHHHHHcCCEEEEECCCCccccccccHHHHHhcCCEEcCCHHHHHHHhCCCCCChhHHHHH
Confidence 998853 345677888999998888 4554 2 233666665 999999999987533233445566
Q ss_pred HHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCe-EEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHH
Q psy6977 144 ALKISNLPKQNPNRERITIITQGDKPIILSQNGK-TTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECG 222 (239)
Q Consensus 144 ~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~-~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a 222 (239)
.+.+.+. |++.||+|+|++|++++++++ .+++|++++ +++||+||||+|+|||++++++|+++++|+++|
T Consensus 227 ~~~l~~~------g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~---~vvDttGAGDaF~ag~l~~l~~g~~~~~al~~a 297 (326)
T PTZ00292 227 SKELQQL------GVENVIITLGANGCLIVEKENEPVHVPGKRV---KAVDTTGAGDCFVGSMAYFMSRGKDLKESCKRA 297 (326)
T ss_pred HHHHHHc------CCCeEEEEeCCCcEEEEeCCCceEEccCCcc---ccCCCcchHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 6777664 889999999999999988764 578888887 899999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCcCC
Q psy6977 223 VWAAQHIIQVSGCTLG 238 (239)
Q Consensus 223 ~~~a~~~~~~~G~~~~ 238 (239)
+++|+.++++.|++.+
T Consensus 298 ~a~Aa~~v~~~G~~~~ 313 (326)
T PTZ00292 298 NRIAAISVTRHGTQSS 313 (326)
T ss_pred HHHHHHHcCCCCcccc
Confidence 9999999999998753
No 12
>cd01172 RfaE_like RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose. LPS plays an important role in maintaining the structural integrity of the bacterial outer membrane of gram-negative bacteria. RfaE consists of two domains, a sugar kinase domain, represented here, and a domain belonging to the cytidylyltransferase superfamily.
Probab=100.00 E-value=3.7e-35 Score=240.66 Aligned_cols=228 Identities=18% Similarity=0.186 Sum_probs=176.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCC--chhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHV--PENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~--~~~~~~~~~~~ 78 (239)
+|.||+|.+|+++++.|+++||+++++...+.+|+.+++++++ + .+.+..+.+....++.+.... ......+++++
T Consensus 59 i~~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~t~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 136 (304)
T cd01172 59 LGVVGDDEAGDLLRKLLEKEGIDTDGIVDEGRPTTTKTRVIAR-N-QQLLRVDREDDSPLSAEEEQRLIERIAERLPEAD 136 (304)
T ss_pred EEEEcCCccHHHHHHHHHhCCCCcceEecCCCCceEEEEEecC-C-cEEEEEecCCCCCCCHHHHHHHHHHHHHhhccCC
Confidence 5789999999999999999999999966566678888777764 3 444443333333333221110 11235678999
Q ss_pred EEEEeccccc-cChHHHHHHHHHhhhCC---CCCh-hhHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhcC
Q psy6977 79 YYYVSGFFLT-VSPESILEVAKVALSCT---IRNI-NYLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISNL 150 (239)
Q Consensus 79 ~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~-p~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~ 150 (239)
+++++++... ++++.+..+++.+++.+ ++|+ +..+..+++. ++|++|++.+++....+..+++++++.+.+.
T Consensus 137 ~v~~s~~~~~~~~~~~~~~~~~~a~~~~~~v~~D~~~~~~~~~~~~d~l~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~ 216 (304)
T cd01172 137 VVILSDYGKGVLTPRVIEALIAAARELGIPVLVDPKGRDYSKYRGATLLTPNEKEAREALGDEINDDDELEAAGEKLLEL 216 (304)
T ss_pred EEEEEcCCCCccCHHHHHHHHHHHHhcCCCEEEeCCCcchhhccCCcEeCCCHHHHHHHhCCCCCChHHHHHHHHHHHHH
Confidence 9999887543 67788889999999887 6676 3333444443 9999999999886433445566777776543
Q ss_pred CCCCCCCceEEEEeeCCCcEEEEE-CCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy6977 151 PKQNPNRERITIITQGDKPIILSQ-NGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHI 229 (239)
Q Consensus 151 ~~~~~~g~~~vvvt~G~~G~~~~~-~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~ 229 (239)
.|++.||||+|++|+++++ +++.+++|++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.+
T Consensus 217 -----~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~---~vvdttGAGDaf~ag~i~~l~~g~~~~~al~~a~a~Aa~~ 288 (304)
T cd01172 217 -----LNLEALLVTLGEEGMTLFERDGEVQHIPALAK---EVYDVTGAGDTVIATLALALAAGADLEEAAFLANAAAGVV 288 (304)
T ss_pred -----hCCCeEEEEcCCCccEEEcCCCcEEEecCCCC---CCCCCcCccHHHHHHHHHHHHcCCCHHHHHHHHHHHhhee
Confidence 3889999999999999998 677889998887 8999999999999999999999999999999999999999
Q ss_pred HHhccCcCC
Q psy6977 230 IQVSGCTLG 238 (239)
Q Consensus 230 ~~~~G~~~~ 238 (239)
+++.|+..+
T Consensus 289 ~~~~g~~~~ 297 (304)
T cd01172 289 VGKVGTAPV 297 (304)
T ss_pred eecCCCCCc
Confidence 999998754
No 13
>COG0524 RbsK Sugar kinases, ribokinase family [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.6e-34 Score=234.89 Aligned_cols=223 Identities=26% Similarity=0.359 Sum_probs=182.0
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCC-CCceeEEEEEecCCCceeEeechh-hhhccCCCCCCCchhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDT-EPTGTCAVLITDNGKARSLVANLA-AANLFTPDHLHVPENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~-~~t~~~~~~~~~~~~~r~~~~~~~-~~~~l~~~~i~~~~~~~~~~~~~ 78 (239)
+|+||+|.+|+.+++.|+++||+++++...+ .+|+.+.+.+++ +++|.++.+++ +...++++++++ ..+...+
T Consensus 57 ~~~vG~D~~g~~~~~~l~~~GVd~~~~~~~~~~~tg~~~i~~~~-~g~r~~~~~~~~a~~~~~~~~~~~----~~~~~~~ 131 (311)
T COG0524 57 IGAVGDDDFGEFLLEELRKEGVDTSHVVTDEGATTGLALILVDE-DGERTFVFYRGAAALLLTPEDLDE----DELAGAD 131 (311)
T ss_pred EEEecCcHHHHHHHHHHHHcCCccceEEEcCCCcceEEEEEEcC-CCceeEEEECCcccccCChHHcCh----HHHhhcC
Confidence 4789999999999999999999999998754 489999888887 48888887777 456677776663 5677999
Q ss_pred EEEEeccccccChHHHHHHHHHhhhCC-----CCCh-hhH------HHHhhHH---hcCHHHHHHHHHHcCCCccCHHHH
Q psy6977 79 YYYVSGFFLTVSPESILEVAKVALSCT-----IRNI-NYL------HHRFIYL---VLIDFEALAFAKQQNFQTEDLHAI 143 (239)
Q Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~g-----~~~~-p~~------~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~ 143 (239)
++|++++.+..+++....+++.+++.| ++|+ +.+ +++++++ ++|++|+..+++. ..+....
T Consensus 132 ~~~~~~~~l~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~l~~~d~~~~n~~E~~~l~g~----~~~~~~~ 207 (311)
T COG0524 132 VLHISGIQLEIPPEALLAALELAKAAGVTVSFDLNPRPALWDRELLEELLALADILFPNEEEAELLTGL----EEDAEAA 207 (311)
T ss_pred eeeEEEeecCCChHHHHHHHHHHHHcCCeEEEecCCCccccchhhHHHHHhhCCEEeCCHHHHHHHhCC----CccHHHH
Confidence 999999888877789999999999998 5666 443 3556655 9999999999873 2455555
Q ss_pred HHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHH
Q psy6977 144 ALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGV 223 (239)
Q Consensus 144 ~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~ 223 (239)
...++. .|++.+|+|+|++|+++++.+...+++.++.++.++|||+||||+|.|||++++++|.++++++++|+
T Consensus 208 ~~~~~~------~~~~~vvvt~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~agfl~~~~~g~~~~~a~~~a~ 281 (311)
T COG0524 208 AALLLA------KGVKTVVVTLGAEGAVVFTGGGEVTVPVPAAFKVKVVDTTGAGDAFAAGFLAGLLEGKSLEEALRFAN 281 (311)
T ss_pred HHHHhh------cCCCEEEEEeCCCcEEEEeCCCceeeccCCCCccccccCCCchHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 545555 38999999999999999998543334422222238999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCcCC
Q psy6977 224 WAAQHIIQVSGCTLG 238 (239)
Q Consensus 224 ~~a~~~~~~~G~~~~ 238 (239)
++|+.++++.|++.+
T Consensus 282 a~aa~~~~~~g~~~~ 296 (311)
T COG0524 282 AAAALAVTRPGARPS 296 (311)
T ss_pred HHhhhhhccCCCCCC
Confidence 999999999999864
No 14
>cd01944 YegV_kinase_like YegV-like sugar kinase. Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.
Probab=100.00 E-value=5e-34 Score=232.37 Aligned_cols=217 Identities=23% Similarity=0.308 Sum_probs=168.9
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.||+|.+|+++++.|++.||+++++.+.+.+|+.+++++++ +++|+++.+.+++..+++++++. ..+.+++++
T Consensus 55 ~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~-~g~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 129 (289)
T cd01944 55 AGPLGNGNWADQIRQAMRDEGIEILLPPRGGDDGGCLVALVEP-DGERSFISISGAEQDWSTEWFAT----LTVAPYDYV 129 (289)
T ss_pred EEEecCChHHHHHHHHHHHcCCccccccccCCCCeEEEEEEcC-CCceEEEEeCCccCCCCHHHhcc----ccCCCCCEE
Confidence 4789999999999999999999999988776678777677765 67888877777666666655543 236789999
Q ss_pred EEecccccc---ChHHHHHHHHHhhhCC--CCCh-hh--------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHH
Q psy6977 81 YVSGFFLTV---SPESILEVAKVALSCT--IRNI-NY--------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAI 143 (239)
Q Consensus 81 ~~~g~~~~~---~~~~~~~~~~~~~~~g--~~~~-p~--------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~ 143 (239)
|++|+.+.. +.+.+.++++..+... ++|+ +. +.++++++ ++|++|+..|++.. .++....
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~l~~~d~~~~n~~E~~~l~g~~---~~~~~~~ 206 (289)
T cd01944 130 YLSGYTLASENASKVILLEWLEALPAGTTLVFDPGPRISDIPDTILQALMAKRPIWSCNREEAAIFAERG---DPAAEAS 206 (289)
T ss_pred EEeCccccCcchhHHHHHHHHHhccCCCEEEEcCcccccccCHHHHHHHHhcCCEEccCHHHHHHHhCCC---CcchHHH
Confidence 999876532 2455666666655333 4444 22 23555665 99999999998852 2222333
Q ss_pred HHHHhcCCCCCCCCceEEEEeeCCCcEEEEE-CCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHH
Q psy6977 144 ALKISNLPKQNPNRERITIITQGDKPIILSQ-NGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECG 222 (239)
Q Consensus 144 ~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~-~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a 222 (239)
++.+... |++.||+|+|++|++++. ++..++.|++++ +++||+||||+|+|||++++.+|+++++|+++|
T Consensus 207 ~~~~~~~------~~~~vvvt~G~~Ga~~~~~~~~~~~~~~~~~---~vvDt~GAGDaf~ag~l~~~~~g~~~~~a~~~a 277 (289)
T cd01944 207 ALRIYAK------TAAPVVVRLGSNGAWIRLPDGNTHIIPGFKV---KAVDTIGAGDTHAGGMLAGLAKGMSLADAVLLA 277 (289)
T ss_pred HHHHHhc------cCCeEEEEECCCcEEEEecCCCeEEecCCCC---CCccCCCchHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 5556653 788999999999999998 456677887877 899999999999999999999999999999999
Q ss_pred HHHHHHHHHhcc
Q psy6977 223 VWAAQHIIQVSG 234 (239)
Q Consensus 223 ~~~a~~~~~~~G 234 (239)
+++|+.++++.|
T Consensus 278 ~a~aa~~~~~~G 289 (289)
T cd01944 278 NAAAAIVVTRSG 289 (289)
T ss_pred HHHHHhhhccCC
Confidence 999999999987
No 15
>TIGR03828 pfkB 1-phosphofructokinase. This enzyme acts in concert with the fructose-specific phosphotransferase system (PTS) which imports fructose as fructose-1-phosphate. The action of 1-phosphofructokinase results in beta-D-fructose-1,6-bisphosphate and is an entry point into glycolysis (GenProp0688).
Probab=100.00 E-value=2e-34 Score=236.36 Aligned_cols=224 Identities=20% Similarity=0.199 Sum_probs=176.8
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCc--hhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVP--ENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~--~~~~~~~~~~ 78 (239)
+|+||+| +|+.+++.|++.||+++++.+.+ +|+.+++++++ +++++.+...+ ..+++++++.. ...+.+++++
T Consensus 55 is~vG~D-~g~~~~~~L~~~gId~~~~~~~~-~t~~~~~~~~~-~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~ 129 (304)
T TIGR03828 55 LGFLGGF-TGDFIEALLREEGIKTDFVRVPG-ETRINVKIKEP-SGTETKLNGPG--PEISEEELEALLEKLRAQLAEGD 129 (304)
T ss_pred EEEecCc-hhHHHHHHHHHCCCcceEEECCC-CCeeeEEEEeC-CCCEEEEECCC--CCCCHHHHHHHHHHHHHhccCCC
Confidence 5789999 69999999999999999998754 57777777775 56777665443 23444333210 1123678999
Q ss_pred EEEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHhhH---H-hcCHHHHHHHHHHcCCCccCHHHHHHHHh
Q psy6977 79 YYYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRFIY---L-VLIDFEALAFAKQQNFQTEDLHAIALKIS 148 (239)
Q Consensus 79 ~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~~~---~-~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 148 (239)
++|++|+.+. ++.+.+..+++.+++.+ .+|+ +.+++.+.. + ++|++|++.+++....+.+++.++++.++
T Consensus 130 ~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~i~~~n~~E~~~l~g~~~~~~~~~~~~~~~l~ 209 (304)
T TIGR03828 130 WLVLSGSLPPGVPPDFYAELIALAREKGAKVILDTSGEALRDGLKAKPFLIKPNDEELEELFGRELKTLEEIIEAARELL 209 (304)
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECChHHHHHHHhcCCcEECcCHHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 9999987653 56788889999998888 5665 444444432 3 89999999998863333345667777777
Q ss_pred cCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHH
Q psy6977 149 NLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQH 228 (239)
Q Consensus 149 ~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~ 228 (239)
++ |++.||||+|++|++++++++.++++++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.
T Consensus 210 ~~------g~~~vvvT~G~~G~~~~~~~~~~~~~~~~~---~vvDttGAGDaF~a~~l~~l~~g~~~~~a~~~a~~~Aa~ 280 (304)
T TIGR03828 210 DL------GAENVLISLGADGALLVTKEGALFAQPPKG---EVVSTVGAGDSMVAGFLAGLESGLSLEEALRLAVAAGSA 280 (304)
T ss_pred Hc------CCCEEEEccCCCCcEEEcCCceEEEeCCCc---cccCCcChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 64 889999999999999998887788888777 799999999999999999999999999999999999999
Q ss_pred HHHhccCcCC
Q psy6977 229 IIQVSGCTLG 238 (239)
Q Consensus 229 ~~~~~G~~~~ 238 (239)
++++.|++.|
T Consensus 281 ~~~~~G~~~p 290 (304)
T TIGR03828 281 AAFSEGTGLP 290 (304)
T ss_pred HhcCcCCCCC
Confidence 9999998755
No 16
>PLN02967 kinase
Probab=100.00 E-value=3.7e-34 Score=246.71 Aligned_cols=227 Identities=14% Similarity=0.163 Sum_probs=173.6
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
||+||+|.+|+++++.|+++||+++++.+. +.+|+.+++.+++++..+.++..++++..+++++++. ..+.++++
T Consensus 263 Ig~VGdD~~G~~ll~~L~~~GVDts~v~~~~~~~Tgla~V~vd~~Gerr~~~~~~gAd~~L~~~di~~----~~l~~A~i 338 (581)
T PLN02967 263 MGKLGDDDYGQAMLYYLNVNKVQTRSVCIDGKRATAVSTMKIAKRGRLKTTCVKPCAEDSLSKSEINI----DVLKEAKM 338 (581)
T ss_pred EEEeCCCHHHHHHHHHHHHcCCcccceEecCCCCCcEEEEEECCCCceEEEEecCChhhhCChhhcCH----hHhcCCCE
Confidence 589999999999999999999999999864 5689999999987444344445678888888877764 56789999
Q ss_pred EEEeccccc--cChHHHHHHHHHhhhCC-----CCCh-hhH-----------HHHhhHH---hcCHHHHHHHHHHcCCCc
Q psy6977 80 YYVSGFFLT--VSPESILEVAKVALSCT-----IRNI-NYL-----------HHRFIYL---VLIDFEALAFAKQQNFQT 137 (239)
Q Consensus 80 ~~~~g~~~~--~~~~~~~~~~~~~~~~g-----~~~~-p~~-----------~~~~~~~---~~n~~E~~~l~~~~~~~~ 137 (239)
+|++++.+. .+...+..+++.+++.| ++|+ +.+ .++++++ ++|++|+..|++......
T Consensus 339 ~hfgg~~ll~e~~~~all~alk~Ak~~Gv~VsFDpNlR~~lw~~~e~~~e~i~elL~~aDILk~NeeEl~~LtG~~~~~e 418 (581)
T PLN02967 339 FYFNTHSLLDPTMRSTTLRAIKISKKLGGVIFYDLNLPLPLWSSSEETKSFIQEAWNLADIIEVTKQELEFLCGIEPTEE 418 (581)
T ss_pred EEEeCchhcccchHHHHHHHHHHHHHCCCEEEEECCCCcccccchHHHHHHHHHHHHhCCEEEECHHHHHHHhCCCcccc
Confidence 999886431 23478889999999988 5554 322 2556666 999999999987521000
Q ss_pred c------------CHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCe---EEEEeccCCCCCCcccCCCCchhhh
Q psy6977 138 E------------DLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGK---TTEFPVQRLPAESVVDTNGAGDSFV 202 (239)
Q Consensus 138 ~------------~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~---~~~~~~~~~~~~~vvdt~GaGDaf~ 202 (239)
. ...+.+..+... |++.||||+|++|+++++++. ...++++++++ .+||||||||+|+
T Consensus 419 ~~~~~~~~~~~~~~~~e~a~~l~~~------g~k~VVVTlG~~Ga~~~~~~~~~~v~~~~a~~V~V-~vVDTTGAGDAF~ 491 (581)
T PLN02967 419 FDTKDNDKSKFVHYSPEVVAPLWHE------NLKVLFVTNGTSKIHYYTKEHNGAVHGMEDAPITP-FTSDMSASGDGIV 491 (581)
T ss_pred ccccccchhccccchHHHHHHHHhC------CCCEEEEEECccceEEEECCCceeEeeccCCCCCC-CCCCCCchhHHHH
Confidence 0 012334555553 889999999999999998754 33344455521 2699999999999
Q ss_pred HHHHHHHHcC-------CCHHHHHHHHHHHHHHHHHhccCcCC
Q psy6977 203 GGFLSQLIKG-------EPLSVCIECGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 203 ag~~~~l~~g-------~~~~~a~~~a~~~a~~~~~~~G~~~~ 238 (239)
|||+++|+++ .+++++++||+++|+.+++..|++.+
T Consensus 492 AGfL~~Ll~g~~~~~g~~~LeeaLrfAnAaAAL~vt~~GA~~g 534 (581)
T PLN02967 492 AGLMRMLTVQPHLITDKGYLEKTIKYAIDCGVIDQWLLARTRG 534 (581)
T ss_pred HHHHHHHHhccCcccccccHHHHHHHHHHHHHHHhccCCCccC
Confidence 9999999973 67999999999999999999999854
No 17
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.8e-34 Score=225.19 Aligned_cols=224 Identities=18% Similarity=0.196 Sum_probs=190.5
Q ss_pred CcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCc--hhhhcccceeE
Q psy6977 2 GAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVP--ENNKLIQNAEY 79 (239)
Q Consensus 2 ~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~--~~~~~~~~~~~ 79 (239)
|.+|.+ .|+.|.+.|+..||...++.+.+ +|+.++-+.+..++..+.+..++ ..+++++++.. .....+.+.|+
T Consensus 57 GflGg~-tg~~~~~~l~~~gi~~~fv~v~g-~TRinvki~~~~~~~~Tein~~G--p~is~~~~~~~l~~~~~~l~~~d~ 132 (310)
T COG1105 57 GFLGGF-TGEFFVALLKDEGIPDAFVEVKG-DTRINVKILDEEDGEETEINFPG--PEISEAELEQFLEQLKALLESDDI 132 (310)
T ss_pred EecCCc-cHHHHHHHHHhcCCCceEEEccC-CCeeeEEEEecCCCcEEEecCCC--CCCCHHHHHHHHHHHHHhcccCCE
Confidence 567876 89999999999999999999866 89998888876555566675544 67777766641 22345788999
Q ss_pred EEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHh---hHH-hcCHHHHHHHHHHcCCCccCHHHHHHHHhc
Q psy6977 80 YYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRF---IYL-VLIDFEALAFAKQQNFQTEDLHAIALKISN 149 (239)
Q Consensus 80 ~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~---~~~-~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~ 149 (239)
++++|+.+. ++.+.+.++++.+++.| ++|. +.+.+.+ |++ +||.+|+..+++....+.+|..++++.+..
T Consensus 133 VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg~~L~~~L~~~P~lIKPN~~EL~~~~g~~~~~~~d~i~~a~~l~~ 212 (310)
T COG1105 133 VVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTSGEALLAALEAKPWLIKPNREELEALFGRELTTLEDVIKAARELLA 212 (310)
T ss_pred EEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECChHHHHHHHccCCcEEecCHHHHHHHhCCCCCChHHHHHHHHHHHH
Confidence 999999887 88999999999999999 7777 5555333 555 999999999999876667788888888777
Q ss_pred CCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy6977 150 LPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHI 229 (239)
Q Consensus 150 ~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~ 229 (239)
. |+++|||++|.+|+++.++++.+++.+|++ ++++|+||||+++|||++++.+++++++++++|+++|+.+
T Consensus 213 ~------g~~~ViVSlG~~Gal~~~~~~~~~a~~p~~---~vvstVGAGDs~VAGf~~~~~~~~~~e~~l~~avA~g~a~ 283 (310)
T COG1105 213 E------GIENVIVSLGADGALLVTAEGVYFASPPKV---QVVSTVGAGDSMVAGFLAGLLKGKSLEEALRFAVACGAAA 283 (310)
T ss_pred C------CCCEEEEEecCcccEEEccCCeEEEeCCCc---ceecCcCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 4 999999999999999999999999998888 8999999999999999999999999999999999999999
Q ss_pred HHhccCcCC
Q psy6977 230 IQVSGCTLG 238 (239)
Q Consensus 230 ~~~~G~~~~ 238 (239)
+++.|...+
T Consensus 284 ~~~~~~~~~ 292 (310)
T COG1105 284 ASQKGTGIP 292 (310)
T ss_pred hhcCCCCCC
Confidence 998886543
No 18
>TIGR02152 D_ribokin_bact ribokinase. This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not.
Probab=100.00 E-value=1.2e-33 Score=230.68 Aligned_cols=222 Identities=25% Similarity=0.319 Sum_probs=183.1
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|.||+|.+|+.+++.|+++||+++++.+. +.+|+.+++++++ +++|+++.+++++..+++++++. ..+.++.+++
T Consensus 51 ~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 127 (293)
T TIGR02152 51 IGKVGDDAFGDELLENLKSNGIDTEYVGTVKDTPTGTAFITVDD-TGENRIVVVAGANAELTPEDIDA--AEALIAESDI 127 (293)
T ss_pred EEEecCCccHHHHHHHHHHcCCCeeEEEEcCCCCCceEEEEEcC-CCCEEEEEECCcCCcCCHHHHHH--HHhhhccCCE
Confidence 478999999999999999999999999865 4589999988876 56777776666555565554432 2356789999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-hh----HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHh
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-NY----LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKIS 148 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p~----~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 148 (239)
+++++ ..+.+.+..+++.+++.+ .+|+ +. ..++++++ ++|++|+..+++....+.++..++++.+.
T Consensus 128 ~~~~~---~~~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~d~l~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 204 (293)
T TIGR02152 128 VLLQL---EIPLETVLEAAKIAKKHGVKVILNPAPAIKDLDDELLSLVDIITPNETEAEILTGIEVTDEEDAEKAAEKLL 204 (293)
T ss_pred EEEec---CCCHHHHHHHHHHHHHcCCEEEEECCcCcccchHHHHhcCCEEccCHHHHHHHhCCCCCCcchHHHHHHHHH
Confidence 99863 456778889999998887 5666 32 24666766 99999999998864334456777888887
Q ss_pred cCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHH
Q psy6977 149 NLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQH 228 (239)
Q Consensus 149 ~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~ 228 (239)
++ |++.+|||+|++|++++++++.++++++++ +++||+||||+|+|||++++++|+++++|+++|+.+|+.
T Consensus 205 ~~------g~~~vvvt~G~~g~~~~~~~~~~~~~~~~~---~~vdt~GAGDaf~Ag~l~~l~~g~~~~~al~~a~~~Aa~ 275 (293)
T TIGR02152 205 EK------GVKNVIITLGSKGALLVSKDESKLIPAFKV---KAVDTTAAGDTFNGAFAVALAEGKSLEDAIRFANAAAAI 275 (293)
T ss_pred Hc------CCCeEEEEeCCCceEEEeCCceeEccCCCC---ceeCCCCcHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 74 899999999999999999988888888887 799999999999999999999999999999999999999
Q ss_pred HHHhccCcC
Q psy6977 229 IIQVSGCTL 237 (239)
Q Consensus 229 ~~~~~G~~~ 237 (239)
++++.|++.
T Consensus 276 ~~~~~G~~~ 284 (293)
T TIGR02152 276 SVTRKGAQS 284 (293)
T ss_pred HHcccCccc
Confidence 999999875
No 19
>cd01166 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.
Probab=100.00 E-value=2.3e-33 Score=228.91 Aligned_cols=218 Identities=25% Similarity=0.342 Sum_probs=173.6
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeech--hhhhccCCCCCCCchhhhcccce
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANL--AAANLFTPDHLHVPENNKLIQNA 77 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~--~~~~~l~~~~i~~~~~~~~~~~~ 77 (239)
+|.||+|.+|+.+++.|+++||+++++.+ .+.+|+.+++.++. +++|+++.+. .+...++.++++ ...++++
T Consensus 51 i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~-~g~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 125 (294)
T cd01166 51 VTAVGDDPFGRFILAELRREGVDTSHVRVDPGRPTGLYFLEIGA-GGERRVLYYRAGSAASRLTPEDLD----EAALAGA 125 (294)
T ss_pred EEecCCCHHHHHHHHHHHHcCCCCceEEEeCCCcceEEEEEecC-CCCceEEEeCCCChhHhCChhhCC----HHHHhCC
Confidence 57899999999999999999999999975 46689998888765 5677666553 344566665554 2567899
Q ss_pred eEEEEeccccccCh---HHHHHHHHHhhhCC---CCCh---hh----------HHHHhhHH---hcCHHHHHHHHHHcCC
Q psy6977 78 EYYYVSGFFLTVSP---ESILEVAKVALSCT---IRNI---NY----------LHHRFIYL---VLIDFEALAFAKQQNF 135 (239)
Q Consensus 78 ~~~~~~g~~~~~~~---~~~~~~~~~~~~~g---~~~~---p~----------~~~~~~~~---~~n~~E~~~l~~~~~~ 135 (239)
+++|++++.+...+ +.+.++++.+++.+ ++|+ +. +.++++++ ++|..|++.+++...
T Consensus 126 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~~~~~~~~~dil~~n~~E~~~l~~~~~- 204 (294)
T cd01166 126 DHLHLSGITLALSESAREALLEALEAAKARGVTVSFDLNYRPKLWSAEEAREALEELLPYVDIVLPSEEEAEALLGDED- 204 (294)
T ss_pred CEEEEcCcchhhCHHHHHHHHHHHHHHHHcCCEEEECCCCcchhcChHHHHHHHHHHHHhCCEEEcCHHHHHHHhCCCC-
Confidence 99999988765433 67888999998877 4555 21 12455555 999999999987521
Q ss_pred CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCH
Q psy6977 136 QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPL 215 (239)
Q Consensus 136 ~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~ 215 (239)
.++..+.++.+ + .|++.|+||+|++|++++++++.++++++++ +++||+||||+|+|||++++++|.++
T Consensus 205 -~~~~~~~~~~l-~------~g~~~viit~G~~G~~~~~~~~~~~~~~~~~---~~vdt~GAGD~f~a~~~~~l~~g~~~ 273 (294)
T cd01166 205 -PTDAAERALAL-A------LGVKAVVVKLGAEGALVYTGGGRVFVPAYPV---EVVDTTGAGDAFAAGFLAGLLEGWDL 273 (294)
T ss_pred -chhHHHHHHhh-c------CCccEEEEEEcCCceEEEECCceEEeCCCCc---ccccCCCchHHHHHHHHHHHHcCCCH
Confidence 12333343434 3 4899999999999999999888889988887 79999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccC
Q psy6977 216 SVCIECGVWAAQHIIQVSGC 235 (239)
Q Consensus 216 ~~a~~~a~~~a~~~~~~~G~ 235 (239)
++|+++|+++|+.++++.|+
T Consensus 274 ~~a~~~a~~~aa~~i~~~G~ 293 (294)
T cd01166 274 EEALRFANAAAALVVTRPGD 293 (294)
T ss_pred HHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999996
No 20
>PLN02323 probable fructokinase
Probab=100.00 E-value=3.7e-33 Score=231.28 Aligned_cols=219 Identities=20% Similarity=0.232 Sum_probs=170.6
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeech--hhhhccCCCCCCCchhhhcccce
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANL--AAANLFTPDHLHVPENNKLIQNA 77 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~--~~~~~l~~~~i~~~~~~~~~~~~ 77 (239)
+|.||+|.+|+++++.|++.||+++++.+. +.+|+.+++.+++ +++|+++.+. +++..+++++++. +.++.+
T Consensus 63 i~~vG~D~~g~~i~~~L~~~GI~~~~v~~~~~~~t~~~~i~~~~-~g~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 137 (330)
T PLN02323 63 IGKVGDDEFGHMLADILKKNGVNNEGVRFDPGARTALAFVTLRS-DGEREFMFYRNPSADMLLRESELDL----DLIRKA 137 (330)
T ss_pred EEEecCChhHHHHHHHHHHcCCCCcceEEcCCCCceEEEEEECC-CCceeEEeecCCchhccCChHHCCh----HHHccC
Confidence 578999999999999999999999998864 5689898888765 5677776553 4455677776663 567889
Q ss_pred eEEEEeccccc--cChHHHHHHHHHhhhCC---CCCh---hh-----------HHHHhhHH---hcCHHHHHHHHHHcCC
Q psy6977 78 EYYYVSGFFLT--VSPESILEVAKVALSCT---IRNI---NY-----------LHHRFIYL---VLIDFEALAFAKQQNF 135 (239)
Q Consensus 78 ~~~~~~g~~~~--~~~~~~~~~~~~~~~~g---~~~~---p~-----------~~~~~~~~---~~n~~E~~~l~~~~~~ 135 (239)
++++++++... .+...+..+++.+++.| ++|+ +. +.++++++ ++|++|+..+++..
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~g~~-- 215 (330)
T PLN02323 138 KIFHYGSISLITEPCRSAHLAAMKIAKEAGALLSYDPNLRLPLWPSAEAAREGIMSIWDEADIIKVSDEEVEFLTGGD-- 215 (330)
T ss_pred CEEEEechhccCchHHHHHHHHHHHHHHcCCEEEEcCCCChhhccCHHHHHHHHHHHHHhCCEEEcCHHHHHHHhCCC--
Confidence 99988765432 12245678888888888 4444 11 12445555 99999999998752
Q ss_pred CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCC-
Q psy6977 136 QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEP- 214 (239)
Q Consensus 136 ~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~- 214 (239)
..+..++. ++.. .|++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|++
T Consensus 216 -~~~~~~~~-~~~~------~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaf~Agfl~~l~~g~~~ 284 (330)
T PLN02323 216 -DPDDDTVV-KLWH------PNLKLLLVTEGEEGCRYYTKDFKGRVEGFKV---KAVDTTGAGDAFVGGLLSQLAKDLSL 284 (330)
T ss_pred -CccHHHHH-HHHh------cCCCEEEEecCCCceEEEeCCCceEeCCccC---CCCCCCCcHHHHHHHHHHHHHcCCcc
Confidence 22233333 3333 3889999999999999999887778888887 8999999999999999999999986
Q ss_pred ------HHHHHHHHHHHHHHHHHhccCcC
Q psy6977 215 ------LSVCIECGVWAAQHIIQVSGCTL 237 (239)
Q Consensus 215 ------~~~a~~~a~~~a~~~~~~~G~~~ 237 (239)
+++|+++|+++|+.++++.|++.
T Consensus 285 ~~~~~~l~~al~~a~a~Aa~~v~~~g~~~ 313 (330)
T PLN02323 285 LEDEERLREALRFANACGAITTTERGAIP 313 (330)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 89999999999999999999863
No 21
>cd01167 bac_FRK Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate. This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate.
Probab=100.00 E-value=2.6e-33 Score=228.78 Aligned_cols=217 Identities=24% Similarity=0.290 Sum_probs=172.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCC-CCCchhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDH-LHVPENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~-i~~~~~~~~~~~~~ 78 (239)
+|+||+|.+|+.+++.|+++||++.++.+ .+.+|+.+++++++ +++|++....+.......+. +. .+.+++++
T Consensus 48 i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~T~~~~~~~~~-~g~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 122 (295)
T cd01167 48 IGKVGDDEFGDFLLETLKEAGVDTRGIQFDPAAPTTLAFVTLDA-DGERSFEFYRGPAADLLLDTELN----PDLLSEAD 122 (295)
T ss_pred EEeecCcHHHHHHHHHHHHcCCCchheeecCCCCceEEEEEECC-CCCEeEEeecCCcHhhhcCccCC----hhHhccCC
Confidence 57899999999999999999999999984 56799999988875 66777776555433222211 22 25678899
Q ss_pred EEEEeccccc--cChHHHHHHHHHhhhCC---CCCh---hh-----------HHHHhhHH---hcCHHHHHHHHHHcCCC
Q psy6977 79 YYYVSGFFLT--VSPESILEVAKVALSCT---IRNI---NY-----------LHHRFIYL---VLIDFEALAFAKQQNFQ 136 (239)
Q Consensus 79 ~~~~~g~~~~--~~~~~~~~~~~~~~~~g---~~~~---p~-----------~~~~~~~~---~~n~~E~~~l~~~~~~~ 136 (239)
+++++++... ...+.+.++++.+++.| .+|+ +. +.++++++ ++|++|+..+++.
T Consensus 123 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~d~l~~n~~E~~~l~~~---- 198 (295)
T cd01167 123 ILHFGSIALASEPSRSALLELLEAAKKAGVLISFDPNLRPPLWRDEEEARERIAELLELADIVKLSDEELELLFGE---- 198 (295)
T ss_pred EEEEechhhccchHHHHHHHHHHHHHHcCCEEEEcCCCChhhcCCHHHHHHHHHHHHHhCCEEEecHHHHHHHhCC----
Confidence 9999765321 12356788899998877 3444 21 22455665 9999999999875
Q ss_pred ccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCC---
Q psy6977 137 TEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGE--- 213 (239)
Q Consensus 137 ~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~--- 213 (239)
....+.++.+.++ |++.+|||+|++|++++++++.+++|++++ +++||+||||+|+|||+++|++|+
T Consensus 199 -~~~~~~~~~l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~a~~~---~vvDttGAGD~f~a~~~~~l~~g~~~~ 268 (295)
T cd01167 199 -EDPEEIAALLLLF------GLKLVLVTRGADGALLYTKGGVGEVPGIPV---EVVDTTGAGDAFVAGLLAQLLSRGLLA 268 (295)
T ss_pred -CCHHHHHHHHhhc------CCCEEEEecCCcceEEEECCcceeeCCCCc---ceeeCCCccHHHHHHHHHHHHhCCccc
Confidence 4455666667664 899999999999999999888889998887 899999999999999999999999
Q ss_pred ----CHHHHHHHHHHHHHHHHHhccCc
Q psy6977 214 ----PLSVCIECGVWAAQHIIQVSGCT 236 (239)
Q Consensus 214 ----~~~~a~~~a~~~a~~~~~~~G~~ 236 (239)
++++|+++|+++|+.+++++|+.
T Consensus 269 ~~~~~~~~a~~~a~~~aa~~~~~~G~~ 295 (295)
T cd01167 269 LDEDELAEALRFANAVGALTCTKAGAI 295 (295)
T ss_pred ccHHHHHHHHHHHHHhhHHHhcccCCC
Confidence 99999999999999999999973
No 22
>TIGR02198 rfaE_dom_I rfaE bifunctional protein, domain I. RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. The longer, N-terminal domain I (this family) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (TIGR02199) adds ADP to yield ADP-D-glycero-D-manno-heptose.
Probab=100.00 E-value=2.6e-33 Score=230.86 Aligned_cols=226 Identities=19% Similarity=0.184 Sum_probs=171.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCC--chhhhcccce
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHV--PENNKLIQNA 77 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~--~~~~~~~~~~ 77 (239)
+|.||+|.+|+++++.|+++||+++++.+ .+.+|+.++++++. + .+....+......++.+.... ....+.++++
T Consensus 67 i~~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~~t~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 144 (315)
T TIGR02198 67 VGVVGDDEAGKRLEALLAEEGIDTSGLIRDKDRPTTTKTRVLAR-N-QQLLRVDFEERDPINAELEARLLAAIREQLASA 144 (315)
T ss_pred EEEEecchhHHHHHHHHHHCCCCcceEEECCCCCcceEEEEEcC-C-eEEEEecCCCCCCCCHHHHHHHHHHHHhhhhhC
Confidence 57899999999999999999999998875 45689888887764 2 222222221111222111000 1123567899
Q ss_pred eEEEEecccc-ccChHHHHHHHHHhhhCC---CCCh-hhHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhc
Q psy6977 78 EYYYVSGFFL-TVSPESILEVAKVALSCT---IRNI-NYLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISN 149 (239)
Q Consensus 78 ~~~~~~g~~~-~~~~~~~~~~~~~~~~~g---~~~~-p~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~ 149 (239)
++++++++.. .++++.+..+++.+++.| ++|+ +..+..++++ ++|++|++.|++. ..+.++.++.++.+..
T Consensus 145 ~~v~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~d~l~~n~~E~~~l~~~-~~~~~~~~~~~~~l~~ 223 (315)
T TIGR02198 145 DAVVLSDYAKGVLTPRVVQEVIAAARKHGKPVLVDPKGKDFSRYRGATLITPNRKEAEAAVGA-CDTEAELVQAAEKLLE 223 (315)
T ss_pred CEEEEecCCCCccCHHHHHHHHHHHHhcCCCEEEeCCCcchhhcCCCcEECCCHHHHHHHhCC-CCCHHHHHHHHHHHHH
Confidence 9999988753 367788999999999888 5676 4434445544 9999999999873 2233456666666654
Q ss_pred CCCCCCCCceEEEEeeCCCcEEEEEC-CeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHH
Q psy6977 150 LPKQNPNRERITIITQGDKPIILSQN-GKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQH 228 (239)
Q Consensus 150 ~~~~~~~g~~~vvvt~G~~G~~~~~~-~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~ 228 (239)
. .|++.||||+|++|++++++ ++.++++++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.
T Consensus 224 ~-----~g~~~vivT~G~~G~~~~~~~~~~~~~~~~~~---~vvdt~GAGDaf~ag~~~~l~~g~~~~~al~~A~~~aa~ 295 (315)
T TIGR02198 224 E-----LDLEALLVTRSEKGMTLFTREGEPIHIPAQAR---EVYDVTGAGDTVIATLALALAAGASLEEACRLANAAAGV 295 (315)
T ss_pred H-----cCCCEEEEEcCCCCeEEEecCCCeEEecCCCC---CCCCCcCccHHHHHHHHHHHHcCCCHHHHHHHHHHHhhh
Confidence 3 38899999999999999884 56788888877 899999999999999999999999999999999999999
Q ss_pred HHHhccCcC
Q psy6977 229 IIQVSGCTL 237 (239)
Q Consensus 229 ~~~~~G~~~ 237 (239)
++++.|++.
T Consensus 296 ~~~~~G~~~ 304 (315)
T TIGR02198 296 VVGKLGTAT 304 (315)
T ss_pred hhccCCCCC
Confidence 999999874
No 23
>PLN02543 pfkB-type carbohydrate kinase family protein
Probab=100.00 E-value=7.1e-33 Score=236.55 Aligned_cols=226 Identities=15% Similarity=0.156 Sum_probs=168.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEe-cCCCceeE-eechhhhhccCCCCCCCchhhhcccce
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLIT-DNGKARSL-VANLAAANLFTPDHLHVPENNKLIQNA 77 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~-~~~~~r~~-~~~~~~~~~l~~~~i~~~~~~~~~~~~ 77 (239)
||+||+|.+|+++++.|+++|||++++.+. +.+|+.+++.++ .+++.+.+ +...+++..+.+++++. ..++++
T Consensus 192 IG~VGdD~fG~~l~~~L~~~GVDts~v~~~~~~~Tgla~V~v~~~~~gr~~~~~~~~gA~~~L~~~di~~----~~l~~a 267 (496)
T PLN02543 192 MGKVGDDDFGEELVLMMNKERVQTRAVKFDENAKTACSRMKIKFRDGGKMVAETVKEAAEDSLLASELNL----AVLKEA 267 (496)
T ss_pred EEEeCCCHHHHHHHHHHHHcCCcccceEecCCCCCceEEEEEEeCCCCCEEEEecCCCHHHhCChhhcCH----hHhCCC
Confidence 589999999999999999999999999975 568999988885 23554433 24456667888887764 567899
Q ss_pred eEEEEeccccccC--hHHHHHHHHHhhhCC-----CCCh-hhHH-----------HHhhHH---hcCHHHHHHHHHHcCC
Q psy6977 78 EYYYVSGFFLTVS--PESILEVAKVALSCT-----IRNI-NYLH-----------HRFIYL---VLIDFEALAFAKQQNF 135 (239)
Q Consensus 78 ~~~~~~g~~~~~~--~~~~~~~~~~~~~~g-----~~~~-p~~~-----------~~~~~~---~~n~~E~~~l~~~~~~ 135 (239)
+++|++++.+.-+ .+.+..+++.+++.| ++|+ |.+| ++++++ ++|++|++.|++....
T Consensus 268 ~ilh~~~~~l~~~~~~~a~~~al~~Ak~~G~~VsfDpN~R~~LW~~~~~~~~~i~~~l~~aDIl~~SeeEa~~Ltg~~~~ 347 (496)
T PLN02543 268 RMFHFNSEVLTSPSMQSTLFRAIELSKKFGGLIFFDLNLPLPLWRSRDETRELIKKAWNEADIIEVSRQELEFLLDEDYY 347 (496)
T ss_pred ceEEECChhhcCchHHHHHHHHHHHHHHCCCEEEEeCCCCccccCCHHHHHHHHHHHHHhCCEEEecHHHHHHHhCCCcc
Confidence 9999988654222 367889999999988 4554 4433 344555 9999999999875210
Q ss_pred ------C------------------ccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecc---CCCC
Q psy6977 136 ------Q------------------TEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQ---RLPA 188 (239)
Q Consensus 136 ------~------------------~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~---~~~~ 188 (239)
+ ..+++.+ ..+... |++.||||+|++|+++++++....++.. .+++
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~------g~~~VVVT~G~~Ga~~~t~~~~g~v~~~~~~~v~~ 420 (496)
T PLN02543 348 ERKRNYPPQYYAESFEQTKNWRDYYHYTPEEI-APLWHD------GLKLLLVTDGTLRIHYYTPKFDGVVVGTEDVLITP 420 (496)
T ss_pred cccccccchhhhhhhhhhhcccccccCCHHHH-HHHHHC------CCCEEEEEcCCCcEEEEECCCcccccccccccCCC
Confidence 0 0133443 445553 8899999999999999986421122111 1111
Q ss_pred CCcccCCCCchhhhHHHHHHHHc-------CCCHHHHHHHHHHHHHHHHHhccCcCC
Q psy6977 189 ESVVDTNGAGDSFVGGFLSQLIK-------GEPLSVCIECGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 189 ~~vvdt~GaGDaf~ag~~~~l~~-------g~~~~~a~~~a~~~a~~~~~~~G~~~~ 238 (239)
.+||||||||+|+|||+++|++ +.+++++++||+++|+.++++.|++.+
T Consensus 421 -~~VDTTGAGDAF~AGfL~~Ll~~~~~~~~g~~l~ealrfAnAaaAl~vt~~GA~~~ 476 (496)
T PLN02543 421 -FTCDRTGSGDAVVAAIMRKLTTCPEMFEDQDVLERQLRFAVAAGIISQWTIGAVRG 476 (496)
T ss_pred -CCcCCCchHHHHHHHHHHHHHhccccccccccHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 3589999999999999999985 678999999999999999999998754
No 24
>cd01945 ribokinase_group_B Ribokinase-like subgroup B. Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. .
Probab=100.00 E-value=6.8e-33 Score=225.16 Aligned_cols=213 Identities=21% Similarity=0.232 Sum_probs=168.3
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|.+|+.+++.|+++||+++++.+. +.+|+.+++ ... .+++..+...+....+..++++. ..++++++
T Consensus 56 ~~~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~~t~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 129 (284)
T cd01945 56 IGVVGDDAIGRLILAELAAEGVDTSFIVVAPGARSPISSI-TDI-TGDRATISITAIDTQAAPDSLPD----AILGGADA 129 (284)
T ss_pred EEEecCchHHHHHHHHHHHcCCCccceeecCCCCCccEEE-Ecc-CCCceEEEecCCCCCCCcccCCH----HHhCcCCE
Confidence 578999999999999999999999999875 457877765 333 34444444445555566666653 45799999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC-----CCCh-hh--HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHh
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT-----IRNI-NY--LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKIS 148 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g-----~~~~-p~--~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 148 (239)
+|++++. ++...++++.+++.| ++|+ +. +.++++++ ++|++|+..+++. .+. ++++.+.
T Consensus 130 v~i~~~~----~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~dil~~n~~e~~~l~~~-----~~~-~~~~~l~ 199 (284)
T cd01945 130 VLVDGRQ----PEAALHLAQEARARGIPIPLDLDGGGLRVLEELLPLADHAICSENFLRPNTGS-----ADD-EALELLA 199 (284)
T ss_pred EEEcCCC----HHHHHHHHHHHHHcCCCeeEeccCCcccchHHHhccCCEEEeChhHHhhhcCC-----CHH-HHHHHHH
Confidence 9998753 366778899998887 3344 21 33555555 8999999988764 222 5666666
Q ss_pred cCCCCCCCCceEEEEeeCCCcEEEEE-CCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHH
Q psy6977 149 NLPKQNPNRERITIITQGDKPIILSQ-NGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQ 227 (239)
Q Consensus 149 ~~~~~~~~g~~~vvvt~G~~G~~~~~-~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~ 227 (239)
+. |++.||||+|++|+++++ +++.++++++++ +++||+||||+|+|||++++++|+++++|+++|+++|+
T Consensus 200 ~~------~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~---~vvDt~GAGDaf~ag~l~~l~~g~~~~~al~~a~~~Aa 270 (284)
T cd01945 200 SL------GIPFVAVTLGEAGCLWLERDGELFHVPAFPV---EVVDTTGAGDVFHGAFAHALAEGMPLREALRFASAAAA 270 (284)
T ss_pred hc------CCcEEEEEECCCCeEEEcCCCCEEecCCCcc---ccccCCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 64 899999999999999998 677888888776 89999999999999999999999999999999999999
Q ss_pred HHHHhccCcCC
Q psy6977 228 HIIQVSGCTLG 238 (239)
Q Consensus 228 ~~~~~~G~~~~ 238 (239)
.++++.|++.+
T Consensus 271 ~~~~~~G~~~~ 281 (284)
T cd01945 271 LKCRGLGGRAG 281 (284)
T ss_pred HHHhccCCccc
Confidence 99999998854
No 25
>PF00294 PfkB: pfkB family carbohydrate kinase; InterPro: IPR011611 This entry includes a variety of carbohydrate and pyrimidine kinases. The family includes phosphomethylpyrimidine kinase (2.7.4.7 from EC). This enzyme is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 1VM7_B 2ABQ_B 3GO7_B 3GO6_B 3FHY_A 4EOH_B 2YXU_A 2F7K_A 3KEU_A 2YXT_B ....
Probab=100.00 E-value=8.5e-34 Score=232.15 Aligned_cols=225 Identities=27% Similarity=0.375 Sum_probs=180.0
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|.||+|.+|+.+++.|++.||+++++.+. +.+|+++++++++ +++|+++.+.+....++++++ ....+.++++
T Consensus 56 i~~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~~t~~~~~~~~~-~g~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 130 (301)
T PF00294_consen 56 IGKVGDDFFGEIILEELKERGVDTSYIPRDGDEPTGRCLIIVDP-DGERTFVFSPGANSDLTPDEL----DEEAIDEADI 130 (301)
T ss_dssp EEEEESSHHHHHHHHHHHHTTEEETTEEEESSSEEEEEEEEEET-TSEEEEEEEEGGGGGGGHHHH----HHHHHHTESE
T ss_pred EeeccCcchhhhhhhccccccccccccccccccccceeEeeecc-cccceeeeccccccccccccc----cccccccccc
Confidence 578999999999999999999999999864 5699999998886 578888877776666666444 2378889999
Q ss_pred EEEec-cccc-cChHHHHHHHHHhhhCC--CCCh--hh-------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHH
Q psy6977 80 YYVSG-FFLT-VSPESILEVAKVALSCT--IRNI--NY-------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAI 143 (239)
Q Consensus 80 ~~~~g-~~~~-~~~~~~~~~~~~~~~~g--~~~~--p~-------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~ 143 (239)
+++++ +... .+...+..+.+.+++.+ +.++ +. +.++++++ ++|++|+..+++....+.++..+.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~ 210 (301)
T PF00294_consen 131 LHLSGVSLPEGIPEDLLEALAKAAKKNGPFDPVFRDPSWDDLREDLKELLPYADILKPNEEEAEALTGSKIDDPEDALAA 210 (301)
T ss_dssp EEEESGHCSTTSHHHHHHHHHHHHHHTTEEEEEEEGGGSHHHHHHHHHHHHTSSEEEEEHHHHHHHHTCSTSSHHHHHHH
T ss_pred eeecccccccccccceeeecccccccccccccccccccccccchhhhhhccccchhccccccccccccccccchhhhhcc
Confidence 99998 3333 45577888888888777 3333 21 22555554 999999999998732222333344
Q ss_pred HHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecc-CCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHH
Q psy6977 144 ALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQ-RLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECG 222 (239)
Q Consensus 144 ~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~-~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a 222 (239)
++.++.. |++.+++|+|++|++++++++.+++++. +. +++||+||||+|+|||++++++|+++++|+++|
T Consensus 211 ~~~l~~~------g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~---~vvdttGAGD~f~A~~i~~l~~~~~~~~a~~~a 281 (301)
T PF00294_consen 211 LRELQAR------GVKIVIVTLGEDGALYYTNDESYHVPPVPPV---NVVDTTGAGDAFAAGFIYGLLSGMSLEEALKFA 281 (301)
T ss_dssp HHHHHHT------TSSEEEEEEGGGEEEEEETTEEEEEEEESSS---SSSSCTTHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred ccccchh------hhhhhhccccccCcccccccccccccccccc---cccceeccchhhhHHHHHHHHcCCCHHHHHHHH
Confidence 4444444 8899999999999999999998888884 45 899999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCcCCC
Q psy6977 223 VWAAQHIIQVSGCTLGL 239 (239)
Q Consensus 223 ~~~a~~~~~~~G~~~~~ 239 (239)
+++|+.++++.|++.|.
T Consensus 282 ~~~aa~~v~~~g~~~~~ 298 (301)
T PF00294_consen 282 NAAAALKVQQPGPRSPL 298 (301)
T ss_dssp HHHHHHHHTSSSSSGGT
T ss_pred HHHHHHHhCCCCCcCCC
Confidence 99999999999998763
No 26
>cd01940 Fructoselysine_kinase_like Fructoselysine kinase-like. Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown.
Probab=100.00 E-value=1.1e-32 Score=221.62 Aligned_cols=209 Identities=17% Similarity=0.215 Sum_probs=162.7
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeech-hhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANL-AAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~-~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|.||+|++|+.+++.|++.||+++++.+.+.+|+.+++.. + +++|+++.+. +......+.+. ....++++++
T Consensus 42 ~~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~-~-~g~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 115 (264)
T cd01940 42 IGAVGNDDAGAHVRSTLKRLGVDISHCRVKEGENAVADVEL-V-DGDRIFGLSNKGGVAREHPFEA----DLEYLSQFDL 115 (264)
T ss_pred EecccCchhHHHHHHHHHHcCCChhheEEcCCCCceEEEEe-c-CCceEEEeecCCcHHhcccCcc----cHhHHhcCCE
Confidence 57899999999999999999999999987556788877543 3 5667665442 33333322211 1256789999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-hh-----HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHH
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-NY-----LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKI 147 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p~-----~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l 147 (239)
+|++++.+ .+.+.++++.+++.| ++|+ +. +.++++++ ++|.+|.. ..+.+++++.+
T Consensus 116 v~~~~~~~---~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~d~~~~~~~~~~---------~~~~~~~~~~l 183 (264)
T cd01940 116 VHTGIYSH---EGHLEKALQALVGAGALISFDFSDRWDDDYLQLVCPYVDFAFFSASDLS---------DEEVKAKLKEA 183 (264)
T ss_pred EEEccccc---HHHHHHHHHHHHHcCCEEEEcCcccCCHHHHHhhcccCCEEEechhhcC---------cchHHHHHHHH
Confidence 99986542 567889999999888 5665 21 23555665 77866531 24456667777
Q ss_pred hcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCC-HHHHHHHHHHHH
Q psy6977 148 SNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEP-LSVCIECGVWAA 226 (239)
Q Consensus 148 ~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~-~~~a~~~a~~~a 226 (239)
.++ |++.||+|+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|++ +++|+++|+++|
T Consensus 184 ~~~------~~~~vvvT~G~~G~~~~~~~~~~~~~~~~~---~~vDttGAGDaf~ag~i~~l~~g~~~~~~al~~a~~~a 254 (264)
T cd01940 184 VSR------GAKLVIVTRGEDGAIAYDGAVFYSVAPRPV---EVVDTLGAGDSFIAGFLLSLLAGGTAIAEAMRQGAQFA 254 (264)
T ss_pred HHc------CCCEEEEEECCCCeEEEeCCeEEecCCcCC---CCCCCCCchHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 664 889999999999999999888888888877 8999999999999999999999999 999999999999
Q ss_pred HHHHHhccCc
Q psy6977 227 QHIIQVSGCT 236 (239)
Q Consensus 227 ~~~~~~~G~~ 236 (239)
+.++++.|+.
T Consensus 255 a~~~~~~G~~ 264 (264)
T cd01940 255 AKTCGHEGAF 264 (264)
T ss_pred HHHhcccCCC
Confidence 9999999974
No 27
>PRK09434 aminoimidazole riboside kinase; Provisional
Probab=100.00 E-value=2.9e-32 Score=223.53 Aligned_cols=217 Identities=19% Similarity=0.298 Sum_probs=170.9
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeec--hhhhhccCCCCCCCchhhhcccce
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVAN--LAAANLFTPDHLHVPENNKLIQNA 77 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~--~~~~~~l~~~~i~~~~~~~~~~~~ 77 (239)
+|.||+|.+|+++++.|+++||+++++.. .+.+|+.+++.+++ +++|++... .++...++.++++ .+.+.
T Consensus 48 v~~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~~t~~~~i~~~~-~g~r~~~~~~~~~~~~~~~~~~~~------~~~~~ 120 (304)
T PRK09434 48 IGRVGDDPFGRFMQQTLQDEGVDTTYLRLDPAHRTSTVVVDLDD-QGERSFTFMVRPSADLFLQPQDLP------PFRQG 120 (304)
T ss_pred EEEecCchHHHHHHHHHHHcCCCCcceEEcCCCCceEEEEEECC-CCCEeEEEecCCchhhhCCHHHhh------hhcCC
Confidence 57899999999999999999999999875 46689888887765 567765432 2333334443332 35679
Q ss_pred eEEEEeccccccC--hHHHHHHHHHhhhCC---CCCh---hhH-----------HHHhhHH---hcCHHHHHHHHHHcCC
Q psy6977 78 EYYYVSGFFLTVS--PESILEVAKVALSCT---IRNI---NYL-----------HHRFIYL---VLIDFEALAFAKQQNF 135 (239)
Q Consensus 78 ~~~~~~g~~~~~~--~~~~~~~~~~~~~~g---~~~~---p~~-----------~~~~~~~---~~n~~E~~~l~~~~~~ 135 (239)
++++++++....+ .....++++.+++.| .+|+ +.. .++++++ ++|++|+..+++.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~e~~~l~g~--- 197 (304)
T PRK09434 121 EWLHLCSIALSAEPSRSTTFEAMRRIKAAGGFVSFDPNLREDLWQDEAELRECLRQALALADVVKLSEEELCFLSGT--- 197 (304)
T ss_pred CEEEEccccccCchHHHHHHHHHHHHHHcCCEEEECCCCChhhccCHHHHHHHHHHHHHhcceeeCCHHHHHHHhCC---
Confidence 9999987654322 245678888888887 3443 221 1445555 9999999999875
Q ss_pred CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCC--
Q psy6977 136 QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGE-- 213 (239)
Q Consensus 136 ~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~-- 213 (239)
++.+++++.+.+. .|++.||||+|++|++++++++.++++++++ +++||+||||+|+|||++++++|+
T Consensus 198 --~~~~~~~~~l~~~-----~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~---~~vDttGAGD~f~ag~~~~l~~g~~~ 267 (304)
T PRK09434 198 --SQLEDAIYALADR-----YPIALLLVTLGAEGVLVHTRGQVQHFPAPSV---DPVDTTGAGDAFVAGLLAGLSQAGLW 267 (304)
T ss_pred --CCHHHHHHHHHhh-----cCCcEEEEEecCCceEEEeCCceeEeCCCCC---CCCcCCCchHHHHHHHHHHHHcCCCc
Confidence 5678888888763 2789999999999999999888889988887 899999999999999999999996
Q ss_pred ----CHHHHHHHHHHHHHHHHHhccCcC
Q psy6977 214 ----PLSVCIECGVWAAQHIIQVSGCTL 237 (239)
Q Consensus 214 ----~~~~a~~~a~~~a~~~~~~~G~~~ 237 (239)
++++|+++|+++|+.++++.|++.
T Consensus 268 ~~~~~~~~a~~~a~~~Aa~~v~~~g~~~ 295 (304)
T PRK09434 268 TDEAELAEIIAQAQACGALATTAKGAMT 295 (304)
T ss_pred cchHHHHHHHHHHHHHHHHHHcccCCcC
Confidence 899999999999999999999763
No 28
>cd01943 MAK32 MAK32 kinase. MAK32 is a protein found primarily in fungi that is necessary for the structural stability of L-A particles. The L-A virus particule is a specialized compartment for the transcription and replication of double-stranded RNA, known to infect yeast and other fungi. MAK32 is part of the host machinery used by the virus to multiply.
Probab=100.00 E-value=6.9e-33 Score=228.85 Aligned_cols=224 Identities=14% Similarity=0.128 Sum_probs=169.8
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
++.+|+| +|+++++.|+++||++++ .+ .+.+|+.+++++++ +++|.++...+.+..+++++++. ..+..+++
T Consensus 51 ~~~vG~D-~G~~l~~~L~~~GVd~~~-~~~~~~~Tg~~~v~~~~-~g~r~~~~~~~~~~~~~~~~l~~----~~~~~a~~ 123 (328)
T cd01943 51 IVDKGSD-FPKSVEDELESWGTGMVF-RRDPGRLTTRGLNIYDG-NDRRFFKYLTPKKRIDVSDDLNS----TPLIRSSC 123 (328)
T ss_pred EEecCCC-CCHHHHHHHHhcCCceEE-EeCCCCcchhhhhhcCC-CCcceeeecCccccccccccccc----ccccCCCe
Confidence 4678999 999999999999999999 54 46689988877765 77787777667777888887764 45778999
Q ss_pred EEEeccccccChHHHHHHHHHhhh------CC---CCCh-hh---------HHHHhhHH---hcCHHHHHHHHHHcCCCc
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALS------CT---IRNI-NY---------LHHRFIYL---VLIDFEALAFAKQQNFQT 137 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~------~g---~~~~-p~---------~~~~~~~~---~~n~~E~~~l~~~~~~~~ 137 (239)
+|+++.... ..+....+++.+++ .+ .+|+ |. +.++++++ ++|++|+..|++....+.
T Consensus 124 ~hl~~~~~~-~~~~~~~~~~~a~~~~~d~~~g~~~~~d~~~~~~~~~~~~~l~~~l~~~dil~~n~~Ea~~l~g~~~~~~ 202 (328)
T cd01943 124 IHLICSPER-CASIVDDIINLFKLLKGNSPTRPKIVWEPLPDSCDPENLEDLLQALPRVDVFSPNLEEAARLLGLPTSEP 202 (328)
T ss_pred EEEECCHHH-HHHHHHHHHHHHHhhccccCCccEEEEecCCcccChhhHHHHHHHhccCCEECCCHHHHHHHhCCCCCCc
Confidence 999765321 12677888888887 45 3444 32 22566665 999999999998633222
Q ss_pred cCHHHHH-----HHHhcCCCCCCCCceEEEEeeCCCcEEEEE--CCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHH
Q psy6977 138 EDLHAIA-----LKISNLPKQNPNRERITIITQGDKPIILSQ--NGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLI 210 (239)
Q Consensus 138 ~~~~~~~-----~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~--~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~ 210 (239)
...+... ..+..... .|++.||||+|++|+++++ +++.+++|++++++.+++||+||||+|+|||+++++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~---~g~~~vvvt~G~~Ga~~~~~~~~~~~~~p~~~v~~~~vvDttGAGDaF~agfl~~l~ 279 (328)
T cd01943 203 SSDEEKEAVLQALLFSGILQ---DPGGGVVLRCGKLGCYVGSADSGPELWLPAYHTKSTKVVDPTGGGNSFLGGFAAGLA 279 (328)
T ss_pred cchhhhhhhHHHHHHHhhhc---cCCCEEEEEeCCCCCEEEecCCCceEecCCccCCCCcccCCCCchHHHHHHHHHHHH
Confidence 2122211 11211111 3889999999999999988 456778877765334799999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHHhccC
Q psy6977 211 KGEPLSVCIECGVWAAQHIIQVSGC 235 (239)
Q Consensus 211 ~g~~~~~a~~~a~~~a~~~~~~~G~ 235 (239)
+|+++++|+++|+++|+.++++.|.
T Consensus 280 ~g~~~~~al~~a~a~Aa~~v~~~G~ 304 (328)
T cd01943 280 LTKSIDEACIYGSVAASFAIEQVGL 304 (328)
T ss_pred cCCCHHHHHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999995
No 29
>TIGR03168 1-PFK hexose kinase, 1-phosphofructokinase family. This family consists largely of 1-phosphofructokinases, but also includes tagatose-6-kinases and 6-phosphofructokinases.
Probab=100.00 E-value=1e-32 Score=226.10 Aligned_cols=224 Identities=17% Similarity=0.199 Sum_probs=175.7
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCc--hhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVP--ENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~--~~~~~~~~~~ 78 (239)
+|.||+| +|+.+++.|++.||+++++...+ +|++++++.++ ++.++.+...+ ..+++++++.. ...+.+++++
T Consensus 55 i~~vG~D-~g~~i~~~l~~~gI~~~~i~~~~-~t~~~~~~~~~-~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 129 (303)
T TIGR03168 55 TGFLGGF-TGEFIEALLAEEGIKNDFVEVKG-ETRINVKIKES-SGEETELNEPG--PEISEEELEQLLEKLRELLASGD 129 (303)
T ss_pred EEEeCCc-hhHHHHHHHHHcCCCceEEECCC-CCEEeEEEEeC-CCCEEEEeCcC--CCCCHHHHHHHHHHHHHhccCCC
Confidence 4789998 79999999999999999998753 56677776664 55666554433 33554443321 1124578999
Q ss_pred EEEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHhh-HH---hcCHHHHHHHHHHcCCCccCHHHHHHHHh
Q psy6977 79 YYYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRFI-YL---VLIDFEALAFAKQQNFQTEDLHAIALKIS 148 (239)
Q Consensus 79 ~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~~-~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 148 (239)
++|++++... ++.+.+..+++.+++.| .+|+ +.+++.+. ++ ++|++|+..+++....+.++..++++.+.
T Consensus 130 ~v~i~~~~~~~~~~~~~~~~~~~~~~~g~~v~~D~~~~~~~~~~~~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~l~ 209 (303)
T TIGR03168 130 IVVISGSLPPGVPPDFYAQLIAIARKRGAKVILDTSGEALREALAAKPFLIKPNHEELEELFGRELKTEEEIIEAARELL 209 (303)
T ss_pred EEEEeCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCcHHHHHHHhcCCcEECCCHHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 9999886543 66788889999998888 6666 33443332 22 89999999998864333345667777777
Q ss_pred cCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHH
Q psy6977 149 NLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQH 228 (239)
Q Consensus 149 ~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~ 228 (239)
++ |++.||||+|++|++++++++.+++|++++ +++||+||||+|+|+|++++++|+++++|+++|+++|+.
T Consensus 210 ~~------g~~~vviT~g~~G~~~~~~~~~~~~~~~~~---~~vDttGAGD~F~a~~~~~l~~g~~i~~a~~~A~~~aa~ 280 (303)
T TIGR03168 210 DR------GAENVLVSLGADGALLVTKEGALKATPPKV---EVVNTVGAGDSMVAGFLAGLARGLSLEEALRFAVAAGSA 280 (303)
T ss_pred Hc------CCCEEEEeecCCCcEEEeCCceEEeeCCcc---eeecCcCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 74 889999999999999999888888888887 799999999999999999999999999999999999999
Q ss_pred HHHhccCcCC
Q psy6977 229 IIQVSGCTLG 238 (239)
Q Consensus 229 ~~~~~G~~~~ 238 (239)
++++.|+++|
T Consensus 281 ~~~~~G~~~~ 290 (303)
T TIGR03168 281 AAFSPGTGLP 290 (303)
T ss_pred HhcCCCcCCC
Confidence 9999999754
No 30
>PRK10294 6-phosphofructokinase 2; Provisional
Probab=100.00 E-value=1.2e-32 Score=226.21 Aligned_cols=226 Identities=17% Similarity=0.145 Sum_probs=172.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCc-hhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVP-ENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~-~~~~~~~~~~~ 79 (239)
++.+|+ ++|+.+++.|++.||+++++.+.+..+...++.+++ +++++++...+. .++.++++.. .....++++++
T Consensus 58 i~~vG~-~~g~~i~~~l~~~gv~~~~~~~~~~~~~~~~i~~~~-~g~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~ 133 (309)
T PRK10294 58 IFPAGG-ATGEHLVSLLADENVPVATVEAKDWTRQNLHVHVEA-SGEQYRFVMPGA--ALNEDEFRQLEEQVLEIESGAI 133 (309)
T ss_pred EEEecC-ccHHHHHHHHHHcCCCceEEECCCCCeeeEEEEEcC-CCcEEEEECCCC--CCCHHHHHHHHHHHHhcCCCCE
Confidence 467896 799999999999999999998755444334445554 556776665442 3444433321 11124678999
Q ss_pred EEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHh--hHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHh
Q psy6977 80 YYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRF--IYL---VLIDFEALAFAKQQNFQTEDLHAIALKIS 148 (239)
Q Consensus 80 ~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~--~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 148 (239)
++++|+.+. .+.+.+.++++.+++.| ++|+ ..+...+ +++ ++|++|+..|++....+.++++++++.++
T Consensus 134 ~~i~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~i~~n~~E~~~l~g~~~~~~~~~~~a~~~l~ 213 (309)
T PRK10294 134 LVISGSLPPGVKLEKLTQLISAAQKQGIRCIIDSSGDALSAALAIGNIELVKPNQKELSALVNRDLTQPDDVRKAAQELV 213 (309)
T ss_pred EEEeCCCCCCCCHHHHHHHHHHHHHcCCeEEEeCCCHHHHHHHhcCCCeEECCCHHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 999987653 55678899999999888 5676 3333322 223 99999999998864333445667777777
Q ss_pred cCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHH
Q psy6977 149 NLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQH 228 (239)
Q Consensus 149 ~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~ 228 (239)
+. .+++.||||+|++|++++++++.++++++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.
T Consensus 214 ~~-----~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaf~ag~l~~l~~g~~~~~al~~a~a~aa~ 285 (309)
T PRK10294 214 NS-----GKAKRVVVSLGPQGALGVDSENCIQVVPPPV---KSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGSA 285 (309)
T ss_pred Hc-----CCCCEEEEecCCCceEEEcCCccEEEeCCCc---ccCCCcchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 64 1378999999999999998887778888877 899999999999999999999999999999999999999
Q ss_pred HHHhccCcCC
Q psy6977 229 IIQVSGCTLG 238 (239)
Q Consensus 229 ~~~~~G~~~~ 238 (239)
++++.|++++
T Consensus 286 ~v~~~G~~~~ 295 (309)
T PRK10294 286 ATLNQGTRLC 295 (309)
T ss_pred HhcCCCCCCC
Confidence 9999999864
No 31
>KOG2855|consensus
Probab=100.00 E-value=1.6e-32 Score=218.35 Aligned_cols=223 Identities=21% Similarity=0.259 Sum_probs=163.6
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
||+||+|.||+++.+.|++++|+++++... +.+|+...+.+.. +|++.++.+.+++....++..+ ...+.++.+++
T Consensus 66 iGkvGdD~fG~~l~~~L~~~~V~~~~v~~~~~~~T~~a~i~v~~-dG~~~~~~v~gan~~~~~~~se--~~~~~i~~ak~ 142 (330)
T KOG2855|consen 66 IGKVGDDEFGDDLLDILKQNGVDTSGVKFDENARTACATITVSK-DGENRIIFVRGANADMLPEDSE--LNLEVIKEAKV 142 (330)
T ss_pred eecccchhhHHHHHHHHhhCCcccccceecCCCceEEEEEEEcc-CCceEEEEEecCchhcCccccc--ccHHHHhhccE
Confidence 689999999999999999999999999964 6699999988875 6666666667777666665432 23488999999
Q ss_pred EEEeccccccChHHHHHH-----HHHhhhCC--CCCh-hhHHHHhhHHhcCHHHHHHHHHHcCCCccCHHHHHH------
Q psy6977 80 YYVSGFFLTVSPESILEV-----AKVALSCT--IRNI-NYLHHRFIYLVLIDFEALAFAKQQNFQTEDLHAIAL------ 145 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~-----~~~~~~~g--~~~~-p~~~~~~~~~~~n~~E~~~l~~~~~~~~~~~~~~~~------ 145 (239)
+++.+ +++.+..... ++.+++.| +.+. +..+++.+...+|+.|++.+++..+.-.-+-+++..
T Consensus 143 ~~~q~---ei~~~~~~~s~~~~~~~~~~~~g~~i~~~pn~~l~l~~~~~~ne~e~~~i~~~adv~~~s~~e~~fl~~~~~ 219 (330)
T KOG2855|consen 143 FHCQS---EILIEEPMRSLHIAAVKVAKNAGPAIFYDPNLRLPLWDSLEENESEIASIWNMADVIKVSSQELAFLTGIED 219 (330)
T ss_pred EEEee---ecCCcchhHHHHHhhhhhhhcccccccCCCCccccccccccccHHHHHHHhhhhhcccccHHHHHHhccCcc
Confidence 99954 4333322222 33555555 2222 222234444467777776666653322222222221
Q ss_pred ----HHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEE-EEeccCCCCCCcccCCCCchhhhHHHHHHHHcC--CC---H
Q psy6977 146 ----KISNLPKQNPNRERITIITQGDKPIILSQNGKTT-EFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKG--EP---L 215 (239)
Q Consensus 146 ----~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~-~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g--~~---~ 215 (239)
+|.. .+.|.||||+|++|+.|++++..- ++++..+ ++||||||||+|+|||+.+|.+| .+ +
T Consensus 220 ~~~~~L~~------~~~k~viVTlG~kG~~y~tk~~~~~~v~~~~V---~~VDtTGAGDsFvgal~~~L~~~~~~~~~~L 290 (330)
T KOG2855|consen 220 DKILKLWH------MKLKLVIVTLGEKGCRYYTKDFKGSHVPAFKV---KAVDTTGAGDSFVGALAVQLVRGSLLPELSL 290 (330)
T ss_pred chHHHHhc------cCCCEEEEEeCCCceEEEecCCCCCCCCCccc---ccccCCCchHHHHHHHHHHHhhccccchHHH
Confidence 2333 266999999999999999986544 8888888 79999999999999999999999 66 9
Q ss_pred HHHHHHHHHHHHHHHHhccCcCC
Q psy6977 216 SVCIECGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 216 ~~a~~~a~~~a~~~~~~~G~~~~ 238 (239)
++++++|++|++.+++++|++++
T Consensus 291 ~~~l~~A~a~~ai~v~~~Ga~~s 313 (330)
T KOG2855|consen 291 EEALRFANACGAITVQRKGAIPS 313 (330)
T ss_pred HHHHHHHHHhhhHHhhccCCCcc
Confidence 99999999999999999999875
No 32
>PRK09850 pseudouridine kinase; Provisional
Probab=100.00 E-value=5.8e-33 Score=228.46 Aligned_cols=223 Identities=17% Similarity=0.208 Sum_probs=169.7
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeec-hhhhhccCCCCCCCchhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVAN-LAAANLFTPDHLHVPENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~-~~~~~~l~~~~i~~~~~~~~~~~~~ 78 (239)
+|+||+|.+|+.+++.|++.||+++++.+ .+.+|+.+++++++ +++|.+..+ +++...++++.++. ..+.+++++
T Consensus 60 ig~vG~D~~g~~i~~~l~~~gVd~~~~~~~~~~~T~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 136 (313)
T PRK09850 60 LSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENTSSYLSLLDN-TGEMLVAINDMNISNAITAEYLAQ--HREFIQRAK 136 (313)
T ss_pred EEEecCchhHHHHHHHHHHcCCCchheeecCCCCceEEEEEecC-CCCEEEEecCchHhhhCCHHHHHH--HHHHHhcCC
Confidence 57899999999999999999999998765 55679999998886 566665443 33344444333321 124578999
Q ss_pred EEEEeccccccChHHHHHHHHHhhhCC-CCCh-hh-----HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHh
Q psy6977 79 YYYVSGFFLTVSPESILEVAKVALSCT-IRNI-NY-----LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKIS 148 (239)
Q Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~g-~~~~-p~-----~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 148 (239)
++++++ .++.+.+..+++.++... ++|+ +. +.++++++ ++|++|+..|++....+.++++++++++.
T Consensus 137 ~v~~~~---~~~~~~~~~~~~~~~g~~v~~D~~~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~ 213 (313)
T PRK09850 137 VIVADC---NISEEALAWILDNAANVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAWFH 213 (313)
T ss_pred EEEEeC---CCCHHHHHHHHHhccCCCEEEEcCCHHHHHHHHhhhccceEEccCHHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 999865 345666667766543111 5665 22 23555555 99999999998853333456777878777
Q ss_pred cCCCCCCCCceEEEEeeCCCcEEEEEC-CeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHH
Q psy6977 149 NLPKQNPNRERITIITQGDKPIILSQN-GKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQ 227 (239)
Q Consensus 149 ~~~~~~~~g~~~vvvt~G~~G~~~~~~-~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~ 227 (239)
+. |++.||||+|++|++++++ ++..++|++++ ++|||+||||+|+|||++++++|+++++|+++|+++|+
T Consensus 214 ~~------g~~~vvvT~G~~G~~~~~~~~~~~~~~~~~~---~vvDttGAGDaF~agfi~~l~~g~~~~eal~~a~a~aa 284 (313)
T PRK09850 214 QH------GLNRLVLSMGGDGVYYSDISGESGWSAPIKT---NVINVTGAGDAMMAGLASCWVDGMPFAESVRFAQGCSS 284 (313)
T ss_pred Hc------CCCEEEEEeCCceEEEEcCCCCeEecCCCCc---ccccCCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 64 8899999999999999975 44566777776 89999999999999999999999999999999999999
Q ss_pred HHHHhccCcCC
Q psy6977 228 HIIQVSGCTLG 238 (239)
Q Consensus 228 ~~~~~~G~~~~ 238 (239)
.++++.++..+
T Consensus 285 ~~~~~~~~~~~ 295 (313)
T PRK09850 285 MALSCEYTNNP 295 (313)
T ss_pred HHhcCCCCCCc
Confidence 99999887643
No 33
>cd01942 ribokinase_group_A Ribokinase-like subgroup A. Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.
Probab=100.00 E-value=5.4e-32 Score=219.32 Aligned_cols=207 Identities=23% Similarity=0.289 Sum_probs=162.7
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|.||+|.+|+.+++.|+++||+++++.. .+.+|+.+++++++ +++|+++.++++...+++++ . ...++++++
T Consensus 56 ~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~ 129 (279)
T cd01942 56 VAAVGEDFHGRLYLEELREEGVDTSHVRVVDEDSTGVAFILTDG-DDNQIAYFYPGAMDELEPND-E----ADPDGLADI 129 (279)
T ss_pred EEEecCCcchHHHHHHHHHcCCCccceEEcCCCCcceEEEEEcC-CCCEEEEecCCcccccccCC-c----hhhhcccCE
Confidence 57899999999999999999999999964 56689998888875 67777776666666665544 2 256789999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-hh--------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHH
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-NY--------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIA 144 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p~--------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~ 144 (239)
+++++.. .+.++++.+++.| .+|+ +. +.++++++ ++|++|+..|..... ..+...
T Consensus 130 ~~~~~~~------~~~~~~~~~~~~g~~v~~D~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~--~~~~~~-- 199 (279)
T cd01942 130 VHLSSGP------GLIELARELAAGGITVSFDPGQELPRLSGEELEEILERADILFVNDYEAELLKERTG--LSEAEL-- 199 (279)
T ss_pred EEeCCch------HHHHHHHHHHHcCCeEEEcchhhhhhccHHHHHHHHhhCCEEecCHHHHHHHHhhcC--CChHHH--
Confidence 9997652 4567777777767 5665 21 23556665 999999954432211 111111
Q ss_pred HHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEecc-CCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHH
Q psy6977 145 LKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQ-RLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGV 223 (239)
Q Consensus 145 ~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~-~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~ 223 (239)
. .|++.||+|+|++|++++++++.+++|++ ++ +++||+||||+|+|||++++++|+++++|+++|+
T Consensus 200 ----~------~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~---~vvDttGAGDaf~a~~i~~l~~g~~l~~al~~a~ 266 (279)
T cd01942 200 ----A------SGVRVVVVTLGPKGAIVFEDGEEVEVPAVPAV---KVVDTTGAGDAFRAGFLYGLLRGYDLEESLRLGN 266 (279)
T ss_pred ----h------cCCCEEEEEECCCceEEEECCceEEccCcCcC---CCcCCCCchHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 1 27899999999999999998888888876 66 8999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCc
Q psy6977 224 WAAQHIIQVSGCT 236 (239)
Q Consensus 224 ~~a~~~~~~~G~~ 236 (239)
++|+.+++++|++
T Consensus 267 ~~Aa~~~~~~G~~ 279 (279)
T cd01942 267 LAASLKVERRGAQ 279 (279)
T ss_pred HHHHHHHcccCCC
Confidence 9999999999985
No 34
>cd01164 FruK_PfkB_like 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases. FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis.
Probab=100.00 E-value=3.2e-32 Score=221.79 Aligned_cols=221 Identities=19% Similarity=0.191 Sum_probs=171.8
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCc--hhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVP--ENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~--~~~~~~~~~~ 78 (239)
+|+||+| +|+.+++.|++.||+++++... .+|+...++.+. +++++.+...+ ..+++++++.. ...+.+++++
T Consensus 56 is~vG~D-~g~~i~~~l~~~gi~~~~~~~~-~~t~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 130 (289)
T cd01164 56 LGFLGGF-TGDFFEALLKEEGIPDDFVEVA-GETRINVKIKEE-DGTETEINEPG--PEISEEELEALLEKLKALLKKGD 130 (289)
T ss_pred EEEccCc-hhHHHHHHHHHcCCCceEEECC-CCCEEEEEEEeC-CCCEEEEeCCC--CCCCHHHHHHHHHHHHHhcCCCC
Confidence 4789998 8999999999999999998864 357777777665 35566554333 23444333210 1124567899
Q ss_pred EEEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHh-hHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHh
Q psy6977 79 YYYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRF-IYL---VLIDFEALAFAKQQNFQTEDLHAIALKIS 148 (239)
Q Consensus 79 ~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~-~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 148 (239)
++|++|..+. .+.+.+..+++.+++.+ .+|+ ..+++.+ +++ ++|++|+..+++....+.++..++++.++
T Consensus 131 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~~~~~~~~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 210 (289)
T cd01164 131 IVVLSGSLPPGVPADFYAELVRLAREKGARVILDTSGEALLAALAAKPFLIKPNREELEELFGRPLGDEEDVIAAARKLI 210 (289)
T ss_pred EEEEeCCCCCCcCHHHHHHHHHHHHHcCCeEEEECChHHHHHHHhcCCcEECCCHHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 9999887653 44578888999888877 4565 2333444 344 89999999999864334456777777787
Q ss_pred cCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHH
Q psy6977 149 NLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQH 228 (239)
Q Consensus 149 ~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~ 228 (239)
+. |++.|++|+|++|++++.+++.++++++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.
T Consensus 211 ~~------g~~~vivt~G~~G~~~~~~~~~~~~~~~~~---~vvDttGAGDaf~a~~i~~l~~g~~~~~a~~~A~~~Aa~ 281 (289)
T cd01164 211 ER------GAENVLVSLGADGALLVTKDGVYRASPPKV---KVVSTVGAGDSMVAGFVAGLAQGLSLEEALRLAVAAGSA 281 (289)
T ss_pred Hc------CCCEEEEecCCCCCEEEcCCcEEEecCCCc---cccCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 74 889999999999999998888888888877 799999999999999999999999999999999999999
Q ss_pred HHHhccC
Q psy6977 229 IIQVSGC 235 (239)
Q Consensus 229 ~~~~~G~ 235 (239)
++++.|+
T Consensus 282 ~~~~~G~ 288 (289)
T cd01164 282 TAFSPGT 288 (289)
T ss_pred HhcCccC
Confidence 9999986
No 35
>PRK13508 tagatose-6-phosphate kinase; Provisional
Probab=100.00 E-value=3.5e-32 Score=223.45 Aligned_cols=221 Identities=12% Similarity=0.126 Sum_probs=166.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCC--chhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHV--PENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~--~~~~~~~~~~~ 78 (239)
+|.||+ .+|+++++.|++ ||+++++...+ +|+.+.++++ +++|+++...++ .++.++... ....+.+++++
T Consensus 56 ~~~vGd-~~G~~i~~~l~~-gI~~~~~~~~~-~t~~~~~~~~--~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 128 (309)
T PRK13508 56 TGLIGG-ELGQFIAEHLDD-QIKHAFYKIKG-ETRNCIAILH--EGQQTEILEKGP--EISVQEADGFLHHFKQLLESVE 128 (309)
T ss_pred EEEecC-hhHHHHHHHHHc-CCCceEEECCC-CCeeeEEEEe--CCCEEEEECCCC--CCCHHHHHHHHHHHHHhccCCC
Confidence 478995 789999999999 99999877643 6777777665 567777765543 232222111 11235678999
Q ss_pred EEEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHh---hHH---hcCHHHHHHHHHHcCC-CccCHHHHHH
Q psy6977 79 YYYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRF---IYL---VLIDFEALAFAKQQNF-QTEDLHAIAL 145 (239)
Q Consensus 79 ~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~---~~~---~~n~~E~~~l~~~~~~-~~~~~~~~~~ 145 (239)
++|++|+.+. .+.+.+..+++.+++.| .+|+ ....+++ ... ++|++|+..+++.... +.++..++++
T Consensus 129 ~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~dii~~n~~E~~~l~g~~~~~~~~~~~~~~~ 208 (309)
T PRK13508 129 VVAISGSLPAGLPVDYYAQLIELANQAGKPVVLDCSGAALQAVLESPYKPTVIKPNIEELSQLLGKEVSEDLDELKEVLQ 208 (309)
T ss_pred EEEEeCCCCCCcCHHHHHHHHHHHHHCCCEEEEECCcHHHHHHHhccCCceEEccCHHHHHHHhCCCCCCCHHHHHHHHH
Confidence 9999987654 34577888999999888 5666 2223332 222 9999999999875211 1123444444
Q ss_pred HHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHH
Q psy6977 146 KISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWA 225 (239)
Q Consensus 146 ~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~ 225 (239)
.+.. .|++.|++|+|++|++++++++.++.+++++ +++||+||||+|+|||++++++|+++++|+++|+++
T Consensus 209 ~~~~------~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~Agfi~~l~~g~~~~~al~~a~a~ 279 (309)
T PRK13508 209 QPLF------EGIEWIIVSLGADGAFAKHNDTFYKVDIPKI---EVVNPVGSGDSTVAGIASGLLHQEDDADLLKKANVL 279 (309)
T ss_pred HHHH------cCCCEEEEecCCCceEEEeCCceEEEeCCCc---cccCCcChhHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 5544 3899999999999999998888888888888 899999999999999999999999999999999999
Q ss_pred HHHHHHhccCcC
Q psy6977 226 AQHIIQVSGCTL 237 (239)
Q Consensus 226 a~~~~~~~G~~~ 237 (239)
|++++++.++..
T Consensus 280 aa~~~~~~~~~~ 291 (309)
T PRK13508 280 GMLNAQEKQTGH 291 (309)
T ss_pred HHHHhcCcCcCC
Confidence 999999888653
No 36
>PRK09513 fruK 1-phosphofructokinase; Provisional
Probab=100.00 E-value=5.2e-32 Score=222.78 Aligned_cols=224 Identities=20% Similarity=0.154 Sum_probs=171.6
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCc--hhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVP--ENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~--~~~~~~~~~~ 78 (239)
+|.||+|.+|+. ++.|+++||++.++...+ +|+.++.+++. +++++.+...+ ..+++.+.+.. .....+++++
T Consensus 59 i~~vG~D~~~~~-~~~l~~~gv~~~~~~~~~-~t~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~d 133 (312)
T PRK09513 59 GGFLGKDNQDGF-QQLFSELGIANRFQVVQG-RTRINVKLTEK-DGEVTDFNFSG--FEVTPADWERFVTDSLSWLGQFD 133 (312)
T ss_pred EEEecCccHHHH-HHHHHHcCCCccEEECCC-CCEEEEEEEeC-CCcEEEEeCCC--CCCCHHHHHHHHHHHHhhcCCCC
Confidence 478999999986 689999999998875544 78877777665 56776655433 22333222210 1124678999
Q ss_pred EEEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHhh---HH-hcCHHHHHHHHHHcCCCccCHHHHHHHHh
Q psy6977 79 YYYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRFI---YL-VLIDFEALAFAKQQNFQTEDLHAIALKIS 148 (239)
Q Consensus 79 ~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~~---~~-~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 148 (239)
++|++|+.+. .+.+.+.++++.+++.| ++|+ +.+++.+. ++ ++|++|+..+++....+.+++.++++.+.
T Consensus 134 ~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~l~~n~~E~~~l~g~~~~~~~~~~~~~~~l~ 213 (312)
T PRK09513 134 MVAVSGSLPRGVSPEAFTDWMTRLRSQCPCIIFDSSREALVAGLKAAPWLVKPNRRELEIWAGRKLPELKDVIEAAHALR 213 (312)
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHhcCCEEEEECChHHHHHHhccCCeEEcCCHHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 9999997654 45578888899998877 5666 44443332 22 89999999999864333345666777777
Q ss_pred cCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHH
Q psy6977 149 NLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQH 228 (239)
Q Consensus 149 ~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~ 228 (239)
++ |++.||+|+|++|++++++++.++.+++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.
T Consensus 214 ~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~---~~vDttGAGDaf~ag~i~~l~~g~~~~~a~~~A~a~Aa~ 284 (312)
T PRK09513 214 EQ------GIAHVVISLGAEGALWVNASGEWIAKPPAC---DVVSTVGAGDSMVGGLIYGLLMRESSEHTLRLATAVSAL 284 (312)
T ss_pred Hc------CCCEEEEEeCCCCcEEEeCCceEEecCCCc---cccCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 74 899999999999999988877777887776 799999999999999999999999999999999999999
Q ss_pred HHHhccCcCC
Q psy6977 229 IIQVSGCTLG 238 (239)
Q Consensus 229 ~~~~~G~~~~ 238 (239)
++++.|..++
T Consensus 285 ~~~~~~~~~~ 294 (312)
T PRK09513 285 AVSQSNVGIT 294 (312)
T ss_pred HhhCCCCCCC
Confidence 9999886543
No 37
>PRK09954 putative kinase; Provisional
Probab=100.00 E-value=3.8e-32 Score=227.72 Aligned_cols=221 Identities=16% Similarity=0.170 Sum_probs=162.6
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeec-hhhhhccCCCCCCCchhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVAN-LAAANLFTPDHLHVPENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~-~~~~~~l~~~~i~~~~~~~~~~~~~ 78 (239)
+|.||+|.+|+++++.|+++||+++++.+ ++.+|+.++++.++ ++.+.+... +.....++++.++. ..+.+..++
T Consensus 113 ig~VG~D~~G~~i~~~l~~~GVd~~~~~~~~~~~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 189 (362)
T PRK09954 113 LSAIGDDFYGETLLEETRRAGVNVSGCIRLHGQSTSTYLAIANR-QDETVLAINDTHILQQLTPQLLNG--SRDLIRHAG 189 (362)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCccceEEcCCCCCeEEEEEEcC-CCCEEEEEcCchhhhcCCHHHHHH--HHHHHhcCC
Confidence 57899999999999999999999998886 45578887776654 444433322 12234444433331 124567889
Q ss_pred EEEEeccccccChHHHHHHHHHhhhCC-CCCh-hh-----HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHh
Q psy6977 79 YYYVSGFFLTVSPESILEVAKVALSCT-IRNI-NY-----LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKIS 148 (239)
Q Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~g-~~~~-p~-----~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 148 (239)
++++++ ..+.+.+..+++.++... .+|+ +. +.++++++ ++|++|++.+++....+.++.+++++.++
T Consensus 190 ~v~~~~---~~~~~~~~~~~~~a~~~~v~~D~~~~~~~~~~~~~l~~~dil~~n~~Ea~~l~g~~~~~~~~~~~~~~~l~ 266 (362)
T PRK09954 190 VVLADC---NLTAEALEWVFTLADEIPVFVDTVSEFKAGKIKHWLAHIHTLKPTQPELEILWGQAITSDADRNAAVNALH 266 (362)
T ss_pred EEEEEC---CCCHHHHHHHHHhCCCCcEEEECCCHHHhhhhhhhhccccEEecCHHHHHHHcCCCCCCHHHHHHHHHHHH
Confidence 998854 345666666666654212 5666 32 23555555 99999999998753323345667777787
Q ss_pred cCCCCCCCCceEEEEeeCCCcEEEEECC-eEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHH
Q psy6977 149 NLPKQNPNRERITIITQGDKPIILSQNG-KTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQ 227 (239)
Q Consensus 149 ~~~~~~~~g~~~vvvt~G~~G~~~~~~~-~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~ 227 (239)
+. |++.||||+|++|+++++.+ +.++++++++ ++||||||||+|+|||++++++|+++++|+++|+++|+
T Consensus 267 ~~------g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~Ag~l~~l~~g~~~~eal~~a~a~Aa 337 (362)
T PRK09954 267 QQ------GVQQIFVYLPDESVFCSEKDGEQFLLTAPAH---TTVDSFGADDGFMAGLVYSFLEGYSFRDSARFAMACAA 337 (362)
T ss_pred Hc------CCCEEEEEeCCccEEEEeCCCceEeccCCCc---ccccccchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 74 89999999999999988754 4667777777 89999999999999999999999999999999999999
Q ss_pred HHHHhccCc
Q psy6977 228 HIIQVSGCT 236 (239)
Q Consensus 228 ~~~~~~G~~ 236 (239)
.++.+..+.
T Consensus 338 l~~~s~~~~ 346 (362)
T PRK09954 338 ISRASGSLN 346 (362)
T ss_pred HHhcCCCcC
Confidence 997655444
No 38
>cd01947 Guanosine_kinase_like Guanosine kinase-like sugar kinases. Found in bacteria and archaea, the guanosine kinase-like group is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.
Probab=100.00 E-value=1.9e-31 Score=214.65 Aligned_cols=199 Identities=21% Similarity=0.271 Sum_probs=157.0
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.||+|.+|+.+++.|++ ++++.++...+.+|+.+++++++ +++|+++...... +++++. ..+++++++
T Consensus 56 i~~vG~D~~g~~i~~~l~~-~~~~~~~~~~~~~t~~~~~~~~~-~g~r~~~~~~~~~----~~~~~~----~~~~~~~~~ 125 (265)
T cd01947 56 FSNLGRDEIGIQSLEELES-GGDKHTVAWRDKPTRKTLSFIDP-NGERTITVPGERL----EDDLKW----PILDEGDGV 125 (265)
T ss_pred EEEecCChHHHHHHHHHHh-cCCcceEEecCCCCceEEEEECC-CCcceEEecCCCC----cccCCH----hHhccCCEE
Confidence 5789999999999999999 99999887666689998888875 6677776543321 223332 467899999
Q ss_pred EEeccccccChHHHHHHHHHhhhCC--CCCh---h---hHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhc
Q psy6977 81 YVSGFFLTVSPESILEVAKVALSCT--IRNI---N---YLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISN 149 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~g--~~~~---p---~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~ 149 (239)
|+++... ..++++.+++.+ +++. + .+.++++++ ++|++|+..+++ .+.+.+
T Consensus 126 ~~~~~~~------~~~~~~~a~~~~~~~~d~~~~~~~~~~~~~~~~~d~~~~n~~e~~~l~~------------~~~~~~ 187 (265)
T cd01947 126 FITAAAV------DKEAIRKCRETKLVILQVTPRVRVDELNQALIPLDILIGSRLDPGELVV------------AEKIAG 187 (265)
T ss_pred EEecccc------cHHHHHHHHHhCCeEeccCccccchhHHHHhhhCCEEEeCHHHHHHhhh------------HHHHHh
Confidence 9987531 235566666656 4444 2 223556665 999999987753 233444
Q ss_pred CCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy6977 150 LPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHI 229 (239)
Q Consensus 150 ~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~ 229 (239)
. |++.||+|+|++|++++++++.++++++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.+
T Consensus 188 ~------~~~~viit~G~~Ga~~~~~~~~~~~~~~~~---~vvDttGAGDaF~ag~l~~l~~g~~~~~al~~a~~~Aa~~ 258 (265)
T cd01947 188 P------FPRYLIVTEGELGAILYPGGRYNHVPAKKA---KVPDSTGAGDSFAAGFIYGLLKGWSIEEALELGAQCGAIC 258 (265)
T ss_pred c------cCCEEEEEeCCCCeEEEECCeeEECCCCCC---CCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 3 889999999999999999888888888877 8999999999999999999999999999999999999999
Q ss_pred HHhccCc
Q psy6977 230 IQVSGCT 236 (239)
Q Consensus 230 ~~~~G~~ 236 (239)
+++.|+.
T Consensus 259 v~~~G~~ 265 (265)
T cd01947 259 VSHFGPY 265 (265)
T ss_pred HhccCCC
Confidence 9999974
No 39
>cd01939 Ketohexokinase Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose. KHK can also phosphorylate several other furanose sugars. It is found in higher eukaryotes where it is believed to function as a dimer and requires K(+) and ATP to be active. In humans, hepatic KHK deficiency causes fructosuria, a benign inborn error of metabolism.
Probab=100.00 E-value=8.1e-32 Score=219.47 Aligned_cols=214 Identities=16% Similarity=0.128 Sum_probs=157.1
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|++|+.+++.|+++||+++++.+. +..+..+++++++ +++|+++...++...++.++++. ..++++++
T Consensus 56 ~~~vG~D~~g~~~~~~l~~~gId~~~~~~~~~~~~~~~~~~~~~-~g~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 130 (290)
T cd01939 56 LGVLSRGPVFESLLDDFQSRGIDISHCYRKDIDEPASSYIIRSR-AGGRTTIVNDNNLPEVTYDDFSK----IDLTQYGW 130 (290)
T ss_pred EEeecCCHHHHHHHHHHHHcCCceeeeeEcCCCCCeeEEEEEcC-CCCeEEEEeCCCCCCCCHHHHhh----hhhccCCE
Confidence 578999999999999999999999998654 3344445655554 56677766666555565555442 33589999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC----------CCCh----hhHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHH
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT----------IRNI----NYLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHA 142 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g----------~~~~----p~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~ 142 (239)
+|++++.+ +...++++.+++.+ ++|+ +.+.++++++ ++|++|+..+ +. .+.++
T Consensus 131 ~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~l~~~di~~~n~~~~~~~-~~-----~~~~~ 200 (290)
T cd01939 131 IHFEGRNP----DETLRMMQHIEEHNNRRPEIRITISVEVEKPREELLELAAYCDVVFVSKDWAQSR-GY-----KSPEE 200 (290)
T ss_pred EEEeccCH----HHHHHHHHHHHHhcCcCCCcceEEEEEeccCchhhhhHHhhCCEEEEEhHHHHhc-Cc-----CCHHH
Confidence 99988654 33445555555432 2333 3355777775 8999887654 43 34455
Q ss_pred HHHHHhcCCCCCCCCceEEEEeeCCCcEEEEEC-CeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCC-HHHHHH
Q psy6977 143 IALKISNLPKQNPNRERITIITQGDKPIILSQN-GKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEP-LSVCIE 220 (239)
Q Consensus 143 ~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~-~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~-~~~a~~ 220 (239)
++..+..+. +|++.||+|+|++|++++.+ ++.+++|+++. .++|||+||||+|+|||+|++++|++ +++|++
T Consensus 201 ~~~~~~~~~----~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~--~~vvDt~GAGDsf~agfl~~l~~g~~~~~~a~~ 274 (290)
T cd01939 201 CLRGEGPRA----KKAALLVCTWGDQGAGALGPDGEYVHSPAHKP--IRVVDTLGAGDTFNAAVIYALNKGPDDLSEALD 274 (290)
T ss_pred HHHhhhhhc----cCCcEEEEEcccCCeEEEcCCCCEEEecCCCC--CCcccCCCchHHHHHHHHHHHHcCCccHHHHHH
Confidence 444332221 37899999999999998876 55677787653 26999999999999999999999995 999999
Q ss_pred HHHHHHHHHHHhccC
Q psy6977 221 CGVWAAQHIIQVSGC 235 (239)
Q Consensus 221 ~a~~~a~~~~~~~G~ 235 (239)
+|+++|+.++++.|.
T Consensus 275 ~a~a~aa~~i~~~G~ 289 (290)
T cd01939 275 FGNRVASQKCTGVGF 289 (290)
T ss_pred HHHHHHHHHHhhhcC
Confidence 999999999999985
No 40
>TIGR01231 lacC tagatose-6-phosphate kinase. This enzyme is part of the tagatose-6-phosphate pathway of lactose degradation.
Probab=100.00 E-value=8.5e-32 Score=221.21 Aligned_cols=221 Identities=13% Similarity=0.115 Sum_probs=165.4
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCC--chhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHV--PENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~--~~~~~~~~~~~ 78 (239)
+|.+|+ .+|+++++.|++.||+++++...+ +|+.+..++. +++|+++..+++. +..+.... ......+++++
T Consensus 55 i~~vG~-~~G~~i~~~l~~~GV~~~~~~~~~-~t~~~~~~~~--~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 128 (309)
T TIGR01231 55 SGFLGG-KLGEFIEKELDHSDIKHAFYKISG-ETRNCIAILH--EGQQTEILEQGPE--ISNQEAAGFLKHFEQLLEKVE 128 (309)
T ss_pred EEEecC-hhHHHHHHHHHHcCCceeEEECCC-CCEEeEEEEe--CCCEEEEeCCCCC--CCHHHHHHHHHHHHHHhccCC
Confidence 478996 499999999999999999988643 5767666664 4677777665532 21111000 11235678999
Q ss_pred EEEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHh---hHH---hcCHHHHHHHHHHcCC-CccCHHHHHH
Q psy6977 79 YYYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRF---IYL---VLIDFEALAFAKQQNF-QTEDLHAIAL 145 (239)
Q Consensus 79 ~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~---~~~---~~n~~E~~~l~~~~~~-~~~~~~~~~~ 145 (239)
++|++|+.+. .+...+..+++.+++.| ++|+ +.++.++ +++ ++|.+|+..+++.... +.++..+.++
T Consensus 129 ~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~ 208 (309)
T TIGR01231 129 VVAISGSLPKGLPQDYYAQIIERCQNKGVPVVLDCSGATLQTVLENPAKPTVIKPNIEELSQLLNQELTEDLESLKQALS 208 (309)
T ss_pred EEEEECCCCCCcCHHHHHHHHHHHHhCCCeEEEECChHHHHHHHhccCCCeEEcCCHHHHHHHhCCCCCCCHHHHHHHHH
Confidence 9999997654 45678889999999888 5665 2233222 233 9999999999875211 1122333444
Q ss_pred HHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHH
Q psy6977 146 KISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWA 225 (239)
Q Consensus 146 ~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~ 225 (239)
.+.. .|++.|++|+|++|++++++++.++++++++ +++||+||||+|+|||++++++|+++++|+++|+++
T Consensus 209 ~~~~------~g~~~vivT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~agfl~~l~~g~~~~~a~~~a~a~ 279 (309)
T TIGR01231 209 QPLF------SGIEWIIVSLGAQGAFAKHGHTFYKVNIPTI---SVVNPVGSGDSTVAGITSALLNHESDHDLLKKANTL 279 (309)
T ss_pred HHHH------cCCCEEEEccCCCceEEEeCCeeEEeeCCcc---CcCCCcchHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 4444 3889999999999999998888888888888 899999999999999999999999999999999999
Q ss_pred HHHHHHhccCc
Q psy6977 226 AQHIIQVSGCT 236 (239)
Q Consensus 226 a~~~~~~~G~~ 236 (239)
|+.++++.++.
T Consensus 280 aa~~~~~~~~~ 290 (309)
T TIGR01231 280 GMLNAQEAQTG 290 (309)
T ss_pred HHHHhcCcccC
Confidence 99999887754
No 41
>cd01941 YeiC_kinase_like YeiC-like sugar kinase. Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.
Probab=99.98 E-value=1.7e-31 Score=217.34 Aligned_cols=216 Identities=23% Similarity=0.271 Sum_probs=165.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEe-echhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLV-ANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~-~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|++|+.+++.|++.||+++++...+.+|+.++++++. +++|++. ..+.....++++.++ ...+.+.++++
T Consensus 55 ~~~lG~D~~g~~i~~~L~~~gI~~~~~~~~~~~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~ 131 (288)
T cd01941 55 LSAVGDDSEGESILEESEKAGLNVRGIVFEGRSTASYTAILDK-DGDLVVALADMDIYELLTPDFLR--KIREALKEAKP 131 (288)
T ss_pred EEEEecCccHHHHHHHHHHcCCccceeeeCCCCcceEEEEECC-CCCEEEEEechHhhhhCCHHHHH--HHHHHHhcCCE
Confidence 4789999999999999999999999987556789998888876 6666653 333333334332221 22356889999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh---hhHHH---HhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHH
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI---NYLHH---RFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKI 147 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~---p~~~~---~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l 147 (239)
+++++ ..+++.+..+++.+++.+ .+|+ +.+++ +++++ ++|++|+..+++....+......+++.+
T Consensus 132 v~~~~---~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~dii~~n~~E~~~~~~~~~~~~~~~~~~~~~~ 208 (288)
T cd01941 132 IVVDA---NLPEEALEYLLALAAKHGVPVAFEPTSAPKLKKLFYLLHAIDLLTPNRAELEALAGALIENNEDENKAAKIL 208 (288)
T ss_pred EEEeC---CCCHHHHHHHHHhhhhcCCcEEEEccchHHhccchhhcccceEEeCCHHHHHHHhCcccCCchhHHHHHHHH
Confidence 99864 345677888888888877 4444 33333 55655 9999999999886332223334455666
Q ss_pred hcCCCCCCCCceEEEEeeCCCcEEEEEC---CeEEEEec-cCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHH
Q psy6977 148 SNLPKQNPNRERITIITQGDKPIILSQN---GKTTEFPV-QRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGV 223 (239)
Q Consensus 148 ~~~~~~~~~g~~~vvvt~G~~G~~~~~~---~~~~~~~~-~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~ 223 (239)
... |++.||+|+|++|++++++ +..+++|+ +++ +++||+||||+|.|||++++++|+++++|+++|+
T Consensus 209 ~~~------~~~~vvit~G~~Ga~~~~~~~~~~~~~~~~~~~~---~~vDttGAGDaf~a~~~~~l~~g~~~~~al~~a~ 279 (288)
T cd01941 209 LLP------GIKNVIVTLGAKGVLLSSREGGVETKLFPAPQPE---TVVNVTGAGDAFVAGLVAGLLEGMSLDDSLRFAQ 279 (288)
T ss_pred HHc------CCcEEEEEeCCCcEEEEecCCCceeEEecCCCCc---cceeCCCcHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 653 8999999999999999987 55678887 355 8999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q psy6977 224 WAAQHIIQ 231 (239)
Q Consensus 224 ~~a~~~~~ 231 (239)
++|+.+++
T Consensus 280 ~~Aa~~~~ 287 (288)
T cd01941 280 AAAALTLE 287 (288)
T ss_pred HHHHHHhc
Confidence 99999986
No 42
>PRK09813 fructoselysine 6-kinase; Provisional
Probab=99.97 E-value=3.6e-31 Score=212.39 Aligned_cols=204 Identities=20% Similarity=0.215 Sum_probs=154.4
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeech-hhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANL-AAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~-~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|.+|+++++.|+++||+++++.+.+.+|+.+++.++ +++|++..+. +....+..+. ...+.+.++++
T Consensus 43 is~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~t~~~~~~~~--~~~r~~~~~~~~~~~~~~~~~----~~~~~l~~~~~ 116 (260)
T PRK09813 43 ITWVGDDDYGTKLKQDLARMGVDISHVHTKHGVTAQTQVELH--DNDRVFGDYTEGVMADFALSE----EDYAWLAQYDI 116 (260)
T ss_pred EEEecCcHHHHHHHHHHHHcCCcchheeeecCCCceEEEEEe--CCcEEeeccCCCcccccccCH----HHHHHHHhCCE
Confidence 578999999999999999999999999876567888877775 5677665432 3223322221 12255788999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-h-----hHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHH
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-N-----YLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKI 147 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p-----~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l 147 (239)
++++.+. ...++++.++++| ++|+ + .+.++++++ +.|.++ ...+++++++.+
T Consensus 117 v~~~~~~------~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~~d~~~~~~~~----------~~~~~~~~~~~~ 180 (260)
T PRK09813 117 VHAAIWG------HAEDAFPQLHAAGKLTAFDFSDKWDSPLWQTLVPHLDYAFASAPQ----------EDEFLRLKMKAI 180 (260)
T ss_pred EEEeccc------hHHHHHHHHHHcCCeEEEEcCCCccHHHHHHhCCceeEEEecCCc----------chHHHHHHHHHH
Confidence 9995321 1245677777777 4555 1 223455554 444332 113455677777
Q ss_pred hcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHH
Q psy6977 148 SNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQ 227 (239)
Q Consensus 148 ~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~ 227 (239)
.+. |++.++||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+++++|+++|+++|+
T Consensus 181 ~~~------g~~~viit~G~~Ga~~~~~~~~~~~~~~~~---~~vDttGAGDaF~ag~i~~~~~g~~~~~al~~a~~~aa 251 (260)
T PRK09813 181 VAR------GAGVVIVTLGENGSIAWDGAQFWRQAPEPV---TVVDTMGAGDSFIAGFLCGWLAGMTLPQAMAQGTACAA 251 (260)
T ss_pred HHc------CCCEEEEEECCCceEEEECCEEEecCCccc---CCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 664 889999999999999999988889888887 79999999999999999999999999999999999999
Q ss_pred HHHHhccC
Q psy6977 228 HIIQVSGC 235 (239)
Q Consensus 228 ~~~~~~G~ 235 (239)
.++++.|+
T Consensus 252 ~~~~~~G~ 259 (260)
T PRK09813 252 KTIQYHGA 259 (260)
T ss_pred HHHhccCC
Confidence 99999986
No 43
>PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional
Probab=99.97 E-value=8.9e-30 Score=220.45 Aligned_cols=225 Identities=17% Similarity=0.166 Sum_probs=164.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechh-hhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLA-AANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~-~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|.||+|.+|+++++.|+++||+++++.+.+.+|+.++++++. ++. ....+.. ....++++.+. ......++++++
T Consensus 70 i~~vG~D~~g~~i~~~L~~~gI~~~~v~~~~~~T~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~l~-~~~~~~l~~~~~ 146 (473)
T PRK11316 70 VGLTGIDEAARALSKLLAAVGVKCDFVSVPTHPTITKLRVLSR-NQQ-LIRLDFEEGFEGVDPQPLL-ERIEQALPSIGA 146 (473)
T ss_pred EEEEcCCHHHHHHHHHHHHcCCceeEEEcCCCCCCeeEEEEeC-Cce-EEecccccCCCchhHHHHH-HHHHHHhccCCE
Confidence 5789999999999999999999999988766789888888763 332 2221111 11111111111 112356789999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-hhHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhcCCC
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-NYLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISNLPK 152 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~ 152 (239)
++++++.... .+.+..+++.+++.| ++|+ +.....++.+ ++|.+|+..+++.. .+.++..+.++++...
T Consensus 147 v~is~~~~~~-~~~~~~~~~~~k~~g~~vv~Dp~~~~~~~~~~~dil~pN~~Ea~~l~g~~-~~~~~~~~~~~~l~~~-- 222 (473)
T PRK11316 147 LVLSDYAKGA-LASVQAMIQLARKAGVPVLIDPKGTDFERYRGATLLTPNLSEFEAVVGKC-KDEAELVEKGMKLIAD-- 222 (473)
T ss_pred EEEecCCccc-hhHHHHHHHHHHhcCCeEEEeCCCCCccccCCCeEECcCHHHHHHHhCCC-CCHHHHHHHHHHHHHh--
Confidence 9998764322 256778888888887 5666 2222223333 99999999998741 1223334445555432
Q ss_pred CCCCCceEEEEeeCCCcEEEEECCe-EEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Q psy6977 153 QNPNRERITIITQGDKPIILSQNGK-TTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQ 231 (239)
Q Consensus 153 ~~~~g~~~vvvt~G~~G~~~~~~~~-~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~ 231 (239)
.|++.|+||+|++|++++++++ .+++|++++ +++||+||||+|.|||++++++|+++++|+++|+++|+.+++
T Consensus 223 ---~g~~~vvVT~G~~G~~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~aa~~~~l~~g~~~~~al~~A~a~Aa~~v~ 296 (473)
T PRK11316 223 ---YDLSALLVTRSEQGMTLLQPGKAPLHLPTQAR---EVYDVTGAGDTVISVLAAALAAGNSLEEACALANAAAGVVVG 296 (473)
T ss_pred ---cCCCEEEEEecCCCcEEEecCCceEEecCcCC---CCCCCCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhcc
Confidence 3889999999999999888765 578888877 899999999999999999999999999999999999999999
Q ss_pred hccCcCC
Q psy6977 232 VSGCTLG 238 (239)
Q Consensus 232 ~~G~~~~ 238 (239)
+.|+..+
T Consensus 297 ~~G~~~~ 303 (473)
T PRK11316 297 KLGTSTV 303 (473)
T ss_pred cCCCccC
Confidence 9998643
No 44
>cd01946 ribokinase_group_C Ribokinase-like subgroup C. Found only in bacteria, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.
Probab=99.96 E-value=9.4e-28 Score=194.34 Aligned_cols=209 Identities=23% Similarity=0.302 Sum_probs=154.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecC----CCceeEeechhhhhccCCCCCCCchhhhccc
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDN----GKARSLVANLAAANLFTPDHLHVPENNKLIQ 75 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~----~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~ 75 (239)
+|.||+| +|+.+++.|+++||+++++.+. +.+|.. ..... +..++..........+.+ .+ .+.+.
T Consensus 44 i~~vG~D-~g~~~~~~l~~~gi~~~~v~~~~~~~t~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~ 113 (277)
T cd01946 44 VGVVGED-FPEEDYKLLNSHNIVTLGLLSKEDGKTFH---WAGRYHYDLNEADTLDTDLNVFADFDP-QL-----PEHYK 113 (277)
T ss_pred EEeccCc-ChHHHHHHHHhccCcceeEEEecCCCeEE---EeeEehhhcccccchhhhhhHHhhcCC-CC-----hHHhh
Confidence 5889999 8999999999999999999864 445521 11110 111121111111122222 12 25578
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhCC--CCCh-hh--------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSCT--IRNI-NY--------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLH 141 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g--~~~~-p~--------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~ 141 (239)
+++++|+++. +++....+++.+++.. .+|+ +. +.++++++ ++|++|+..|++. +++.
T Consensus 114 ~~~~v~~~~~----~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~l~~~d~~~~n~~E~~~l~g~-----~~~~ 184 (277)
T cd01946 114 DSEFVFLGNI----APELQREVLEQVKDPKLVVMDTMNFWISIKPEKLKKVLAKVDVVIINDGEARQLTGA-----ANLV 184 (277)
T ss_pred cCCEEEECCC----CHHHHHHHHHHHHhCCEEEEccHHHhhhhhHHHHHHHhccCCEEeCCHHHHHHHhCC-----chHH
Confidence 8999999653 4566777788777545 5564 22 23555655 9999999999864 5677
Q ss_pred HHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcC-----CCHH
Q psy6977 142 AIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKG-----EPLS 216 (239)
Q Consensus 142 ~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g-----~~~~ 216 (239)
++++.+.++ |++.||+|+|.+|++++++++.+++|++++ .+++||+||||+|.|||++++.++ .+++
T Consensus 185 ~~~~~l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~--~~~vDttGAGDaF~Agfl~~l~~~~~~~~~~~~ 256 (277)
T cd01946 185 KAARLILAM------GPKALIIKRGEYGALLFTDDGYFAAPAYPL--ESVFDPTGAGDTFAGGFIGYLASQKDTSEANMR 256 (277)
T ss_pred HHHHHHHHc------CCCEEEEecCCCcEEEEECCceEEcCCccc--CccCCCCCchHHHHHHHHHHHHhCCCcchhhHH
Confidence 888888874 899999999999999998888888887776 248999999999999999999987 4699
Q ss_pred HHHHHHHHHHHHHHHhccCc
Q psy6977 217 VCIECGVWAAQHIIQVSGCT 236 (239)
Q Consensus 217 ~a~~~a~~~a~~~~~~~G~~ 236 (239)
+|+++|+++|+.++++.|+.
T Consensus 257 ~a~~~a~~~aa~~~~~~G~~ 276 (277)
T cd01946 257 RAIIYGSAMASFCVEDFGTK 276 (277)
T ss_pred HHHHHhHHHHhhhhhhcCCC
Confidence 99999999999999999975
No 45
>PLN02630 pfkB-type carbohydrate kinase family protein
Probab=99.94 E-value=6e-26 Score=186.95 Aligned_cols=195 Identities=18% Similarity=0.232 Sum_probs=152.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecC----CCceeEeechhhhhccCCCCCCCchhhhcccc
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDN----GKARSLVANLAAANLFTPDHLHVPENNKLIQN 76 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~----~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~ 76 (239)
||+||+|.. .+|+...+...+.+|+.+.+++++. ++++.++...+++..+++++++. ..++.
T Consensus 57 is~VG~D~~----------~~v~~~~~~~~~~~T~~~~~~~~~g~~~~~~e~~i~~~~ga~~~l~~~di~~----~~~~~ 122 (335)
T PLN02630 57 VSKVGPDFL----------YQVSHPPIVIPDSKTTEFHADFDQGIDGNGHEDRVLKRVCACDPIEPSDIPD----MRYEF 122 (335)
T ss_pred EEEecCCcc----------ccccccceecCCCCceEEEEEEcCCcccCCCCeEEEEeccccCCCChHHCCH----HHhcc
Confidence 578999952 3677665555566898888877653 45777888889999999988874 24677
Q ss_pred eeEEEEeccccccChHHHHHHHHHhhh-----CC---CCCh-hh-----------HHHHhhHH---hcCHHHHHHHHHHc
Q psy6977 77 AEYYYVSGFFLTVSPESILEVAKVALS-----CT---IRNI-NY-----------LHHRFIYL---VLIDFEALAFAKQQ 133 (239)
Q Consensus 77 ~~~~~~~g~~~~~~~~~~~~~~~~~~~-----~g---~~~~-p~-----------~~~~~~~~---~~n~~E~~~l~~~~ 133 (239)
++++++.+ +++++....+++.++. +| .+|+ +. +.++++++ ++|++|+..+
T Consensus 123 ~~~~~l~~---ei~~e~~~~~~~~a~~v~~D~~g~~~~~Dp~~~~~~~~~~~~~~~~~~L~~iDil~~ne~Ea~~l---- 195 (335)
T PLN02630 123 GMAVGVAG---EILPETLERMVEICDVVVVDIQALIRVFDPVDGTVKLVKLEETGFYDMLPRIGFLKASSEEALFI---- 195 (335)
T ss_pred cceeeecC---CCcHHHHHHHHHHhhhheeccCceEEecCCcccccccchhhHHHHHHHHHhCCEEEecHHHHhhc----
Confidence 78888843 4557888889998887 56 5566 32 22556666 9999999765
Q ss_pred CCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCC
Q psy6977 134 NFQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGE 213 (239)
Q Consensus 134 ~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~ 213 (239)
+.+++ .+ .+.||||+|++|++++++++.++++++++ +++||+||||+|+|||++++++|.
T Consensus 196 -----~~~~~----~~--------~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vDttGAGDaF~agfi~~l~~g~ 255 (335)
T PLN02630 196 -----DVEEV----RQ--------KCCVIVTNGKKGCRIYWKDGEMRVPPFPA---IQVDPTGAGDSFLGGFVAGLVQGL 255 (335)
T ss_pred -----CHHHH----cc--------CCEEEEEECCCceEEEECCeeEEeCCCCC---CCCCCCChHHHHHHHHHHHHHcCC
Confidence 22222 22 13899999999999999888888888887 799999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhccCc
Q psy6977 214 PLSVCIECGVWAAQHIIQVSGCT 236 (239)
Q Consensus 214 ~~~~a~~~a~~~a~~~~~~~G~~ 236 (239)
++++|+++|+++|+.++++.|..
T Consensus 256 ~~~~a~~~A~a~aa~~v~~~G~~ 278 (335)
T PLN02630 256 AVPDAALLGNYFGSLAVEQVGIP 278 (335)
T ss_pred CHHHHHHHHHHHHHHHhCcCCCC
Confidence 99999999999999999999953
No 46
>cd01937 ribokinase_group_D Ribokinase-like subgroup D. Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.
Probab=99.94 E-value=6.9e-26 Score=181.20 Aligned_cols=197 Identities=20% Similarity=0.151 Sum_probs=144.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.||+|.+|+ ++.|++.||++..+. ..+|+.+++.++. +++|.++.+.+....... . ...+.+++++
T Consensus 44 i~~vG~D~~g~--~~~l~~~gv~~~~~~--~~~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~ 111 (254)
T cd01937 44 VTKVGRDYPDK--WSDLFDNGIEVISLL--STETTTFELNYTN-EGRTRTLLAKCAAIPDTE--S-----PLSTITAEIV 111 (254)
T ss_pred EEeeCCCchHH--HHHHHHCCcEEEEec--CCCeEEEEEEecC-CCCeeeeeccccCCcccc--c-----ccccCcccEE
Confidence 57899999999 788999999975443 3356666666664 456666555443322211 1 1346789999
Q ss_pred EEeccccccChHHHHHHHHHhhhCCCCCh-hh----------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHH
Q psy6977 81 YVSGFFLTVSPESILEVAKVALSCTIRNI-NY----------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALK 146 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~g~~~~-p~----------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~ 146 (239)
|+++. +++....+.+.+. .-.+|+ +. +.++++++ ++|++|+..+ .+.+++++.
T Consensus 112 ~~~~~----~~~~~~~~~~~~~-~v~~D~~~~~~~~~~~~~~~~~~l~~~di~~~n~~E~~~~--------~~~~~~~~~ 178 (254)
T cd01937 112 ILGPV----PEEISPSLFRKFA-FISLDAQGFLRRANQEKLIKCVILKLHDVLKLSRVEAEVI--------STPTELARL 178 (254)
T ss_pred EECCC----cchhcHHHHhhhh-heeEccccceeeccccchHHHhhcccCcEEEEcHHHHhhc--------CCHHHHHHH
Confidence 99754 2333334443331 113333 11 12555665 8999998772 467778888
Q ss_pred HhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHH
Q psy6977 147 ISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAA 226 (239)
Q Consensus 147 l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a 226 (239)
+.++ |++.||+|+|++|++++++++.++++++++ +++||+||||+|+|||++++.+|+++++|+++|+++|
T Consensus 179 l~~~------g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~---~~vdt~GAGD~f~a~~~~~l~~g~~~~~a~~~a~~~a 249 (254)
T cd01937 179 IKET------GVKEIIVTDGEEGGYIFDGNGKYTIPASKK---DVVDPTGAGDVFLAAFLYSRLSGKDIKEAAEFAAAAA 249 (254)
T ss_pred HHHc------CCCEEEEeeCCcceEEEECCccEEccccCc---eeccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 7774 899999999999999999888888888877 7999999999999999999999999999999999999
Q ss_pred HHHHH
Q psy6977 227 QHIIQ 231 (239)
Q Consensus 227 ~~~~~ 231 (239)
+.+++
T Consensus 250 a~~i~ 254 (254)
T cd01937 250 AKFIE 254 (254)
T ss_pred HHHhC
Confidence 99864
No 47
>KOG2947|consensus
Probab=99.91 E-value=6.3e-23 Score=154.77 Aligned_cols=218 Identities=15% Similarity=0.164 Sum_probs=160.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.+....--+++++.|++.|||+++....+..++.+.++++.+.+.|++++.....+.++-+++.. --+.+..|+
T Consensus 61 ~Gvlsr~~~f~~lLddl~~rgIdishcpftd~~pp~ssiI~~r~s~trTil~~dks~p~vT~~dF~k----vdl~qy~Wi 136 (308)
T KOG2947|consen 61 FGVLSRGHVFRFLLDDLRRRGIDISHCPFTDHSPPFSSIIINRNSGTRTILYCDKSLPDVTATDFEK----VDLTQYGWI 136 (308)
T ss_pred eeecccchhHHHHHHHHHhcCCCcccCccccCCCCcceEEEecCCCceEEEEecCCCccccHHHhhh----cccceeeeE
Confidence 3566777788999999999999999998777777788999999899999998887778777777653 456799999
Q ss_pred EEeccccccChHHHHHHHHHhhhCC-----------CCCh----hhHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHH
Q psy6977 81 YVSGFFLTVSPESILEVAKVALSCT-----------IRNI----NYLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHA 142 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~g-----------~~~~----p~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~ 142 (239)
||.+. ++....+|++...+++ .+++ +.+.+++.+. +.+++=++.+ ...++++
T Consensus 137 hfE~R----np~etlkM~~~I~~~N~r~pe~qrI~vSvd~en~req~~~l~am~DyVf~sK~~a~~~------gfks~re 206 (308)
T KOG2947|consen 137 HFEAR----NPSETLKMLQRIDAHNTRQPEEQRIRVSVDVENPREQLFQLFAMCDYVFVSKDVAKHL------GFKSPRE 206 (308)
T ss_pred EEecC----ChHHHHHHHHHHHHhhcCCCccceEEEEEEecCcHHHHHHHhhcccEEEEEHHHHhhh------ccCCHHH
Confidence 99543 3334445555555554 2233 3333444333 5665544443 2356777
Q ss_pred HHHHHhcCCCCCCCCceEEEEeeCCCcEEEEE-CCeEEEEeccCCCCCCcccCCCCchhhhHHHHHH-HHcCCCHHHHHH
Q psy6977 143 IALKISNLPKQNPNRERITIITQGDKPIILSQ-NGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQ-LIKGEPLSVCIE 220 (239)
Q Consensus 143 ~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~-~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~-l~~g~~~~~a~~ 220 (239)
+.+.+..+..-+. ..+.+|+.++++|+-... +++.+++++.+-| ++||+.|+||+|.|||+|+ +.++.++.||++
T Consensus 207 a~~~l~~r~~~~~-pkpv~I~~w~~eGA~~l~adg~yfev~a~~pp--kvVD~lg~~DtF~A~vIyA~lk~~r~l~eAvd 283 (308)
T KOG2947|consen 207 ACEGLYGRVPKGK-PKPVLICPWASEGAGALGADGKYFEVDAFKPP--KVVDTLGAGDTFNAGVIYALLKQGRSLAEAVD 283 (308)
T ss_pred HHHHHHhhcccCC-CCcEEEeccccccccccCCCCCEEecCCCCCc--cceeeccCCCcchHHHHHHHHHhhhhHHHHHH
Confidence 7766655544111 124577889999987664 4677787777643 9999999999999999999 567999999999
Q ss_pred HHHHHHHHHHHhccC
Q psy6977 221 CGVWAAQHIIQVSGC 235 (239)
Q Consensus 221 ~a~~~a~~~~~~~G~ 235 (239)
||+++|+.+++-.|-
T Consensus 284 fg~rvas~Kl~g~Gf 298 (308)
T KOG2947|consen 284 FGNRVASKKLGGQGF 298 (308)
T ss_pred HHHHhhhcccccccc
Confidence 999999999988773
No 48
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.90 E-value=3.8e-23 Score=166.73 Aligned_cols=222 Identities=18% Similarity=0.194 Sum_probs=170.9
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCC--chhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHV--PENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~--~~~~~~~~~~~ 78 (239)
+|.+|+|+.|+.+.+.|...+|+..++....++|.....++.. .++.+..+.. ..+..+.... ..+...+.+.+
T Consensus 70 ~GvvG~Deag~~L~~~l~~~~i~~~l~~~~~r~T~~K~Rv~s~--nQQllRvD~E--e~~~~~~~~~ll~~~~~~l~~~~ 145 (467)
T COG2870 70 VGVVGKDEAGKALIELLKANGIDSDLLRDKNRPTIVKLRVLSR--NQQLLRLDFE--EKFPIEDENKLLEKIKNALKSFD 145 (467)
T ss_pred EEeeccchhHHHHHHHHHhcCcccceEeecCCCceeeeeeecc--cceEEEeccc--ccCcchhHHHHHHHHHHHhhcCC
Confidence 5889999999999999999999988888778899888888864 3333322221 1111111111 23447788999
Q ss_pred EEEEeccccccChHHHHHHHHHhhhCC---CCCh-hhHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhcCC
Q psy6977 79 YYYVSGFFLTVSPESILEVAKVALSCT---IRNI-NYLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISNLP 151 (239)
Q Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~ 151 (239)
.+++|.|.-..-.+ +..+++.+++.| .+|+ +.--+.+..+ .||..|++...|... +.+++.+...+|.+.+
T Consensus 146 ~vVLSDY~KG~L~~-~q~~I~~ar~~~~pVLvDPKg~Df~~Y~GAtLiTPN~~E~~~~vg~~~-~e~el~~~g~kL~~~~ 223 (467)
T COG2870 146 ALVLSDYAKGVLTN-VQKMIDLAREAGIPVLVDPKGKDFEKYRGATLITPNLKEFEEAVGKCK-SEEELEERGQKLKEEL 223 (467)
T ss_pred EEEEeccccccchh-HHHHHHHHHHcCCcEEECCCCcchhhhCCCeecCCCHHHHHHHHcccc-cHHHHHHHHHHHHHhh
Confidence 99999987663222 788999999998 5666 3222233333 899999999998743 2344666667777764
Q ss_pred CCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Q psy6977 152 KQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQ 231 (239)
Q Consensus 152 ~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~ 231 (239)
+...+++|++++|+.+++.++..|+|+... +|-|.|||||+-+|.|..+++.|.++++|+.+|++||+..+.
T Consensus 224 -----~L~alLvTRsE~GMtL~~~~~~~h~pt~Ak---EVyDVTGAGDTVIa~la~~laaG~s~~eAc~lAN~AagiVVg 295 (467)
T COG2870 224 -----DLSALLVTRSEKGMTLFQEGKPLHFPARAK---EVYDVTGAGDTVIAVLAAALAAGASLEEACELANAAAGIVVG 295 (467)
T ss_pred -----CcceEEEEeccCCceeecCCcccccchhhe---eeeeccCCCchHHHHHHHHHHcCCCHHHHHHHhhhhcceEEe
Confidence 678999999999999999888888888775 899999999999999999999999999999999999999999
Q ss_pred hccCc
Q psy6977 232 VSGCT 236 (239)
Q Consensus 232 ~~G~~ 236 (239)
..|+.
T Consensus 296 KlGTa 300 (467)
T COG2870 296 KLGTA 300 (467)
T ss_pred eccce
Confidence 99874
No 49
>PRK05756 pyridoxamine kinase; Validated
Probab=99.76 E-value=1.4e-17 Score=135.29 Aligned_cols=149 Identities=17% Similarity=0.199 Sum_probs=113.2
Q ss_pred ccceeEEEEeccccc-cChHHHHHHHHHhhhCC-----CCCh---h-------------hHH-HHhhHH---hcCHHHHH
Q psy6977 74 IQNAEYYYVSGFFLT-VSPESILEVAKVALSCT-----IRNI---N-------------YLH-HRFIYL---VLIDFEAL 127 (239)
Q Consensus 74 ~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~g-----~~~~---p-------------~~~-~~~~~~---~~n~~E~~ 127 (239)
+...+++ ++|+.+. ...+.+.++++.+++.+ ++|+ + .+. ++++++ +||..|++
T Consensus 72 l~~~~~v-~~G~l~~~~~~~~v~~~i~~~k~~~~~~~~v~DPv~~d~~~~~~~~~~~~~~~~~~ll~~adiitpN~~Ea~ 150 (286)
T PRK05756 72 LGECDAV-LSGYLGSAEQGEAILDAVRRVKAANPQALYFCDPVMGDPEKGCIVAPGVAEFLRDRALPAADIITPNLFELE 150 (286)
T ss_pred cccCCEE-EECCCCCHHHHHHHHHHHHHHHHhCCCceEEECCccccCCCCEEECccHhHHHHHhhcccccEecCCHHHHH
Confidence 4577855 6687665 33467888888877654 3343 2 111 355555 99999999
Q ss_pred HHHHHcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCC--------cEEEEECCeEEEEeccCCCCCCc-ccCCCCc
Q psy6977 128 AFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDK--------PIILSQNGKTTEFPVQRLPAESV-VDTNGAG 198 (239)
Q Consensus 128 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~--------G~~~~~~~~~~~~~~~~~~~~~v-vdt~GaG 198 (239)
.|++....+.++..+++++++++ |++.|+||.|.. |++++++++.++.+.+++ ++ +|++|||
T Consensus 151 ~L~g~~~~~~~~~~~~~~~l~~~------g~~~Vvvt~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~v~~~GaG 221 (286)
T PRK05756 151 WLSGRPVETLEDAVAAARALIAR------GPKIVLVTSLARAGYPADRFEMLLVTADGAWHISRPLV---DFMRQPVGVG 221 (286)
T ss_pred HHhCCCcCCHHHHHHHHHHHHHh------CCCEEEEeccccCCCCCCcEEEEEEECCceEEEecCcc---CCCCCCCChH
Confidence 99986433345566777778774 899999999876 477777777777777776 56 7999999
Q ss_pred hhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 199 DSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 199 Daf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
|+|+|+|++++++|+++++|+++|++.....+..
T Consensus 222 D~f~a~~~a~l~~g~~~~~al~~A~~~~~~~i~~ 255 (286)
T PRK05756 222 DLTSALFLARLLQGGSLEEALEHTTAAVYEVMAR 255 (286)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988877765
No 50
>cd01173 pyridoxal_pyridoxamine_kinase Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5'-phosphate (PLP), by catalyzing the phosphorylation of the precursor vitamin B6 in the presence of Zn2+ and ATP. Mammals are unable to synthesize PLP de novo and require its precursors in the form of vitamin B6 (pyridoxal, pyridoxine, and pyridoxamine) from their diet. Pyridoxal kinase encoding genes are also found in many other species including yeast and bacteria.
Probab=99.75 E-value=2.5e-17 Score=131.78 Aligned_cols=148 Identities=16% Similarity=0.211 Sum_probs=113.1
Q ss_pred cceeEEEEeccccc-cChHHHHHHHHHhhhC--C---CCCh---h-------------hHHHHhh-HH---hcCHHHHHH
Q psy6977 75 QNAEYYYVSGFFLT-VSPESILEVAKVALSC--T---IRNI---N-------------YLHHRFI-YL---VLIDFEALA 128 (239)
Q Consensus 75 ~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~--g---~~~~---p-------------~~~~~~~-~~---~~n~~E~~~ 128 (239)
..++++ ++|+.+. ...+.+.++++.+++. + ++|+ + .+.+++. ++ ++|.+|+..
T Consensus 71 ~~~~~v-~~G~l~~~~~~~~~~~~l~~~~~~~~~~~vv~Dpv~~~~~~~~~~~~~~~~~~~~~l~~~~dvi~pN~~Ea~~ 149 (254)
T cd01173 71 LEYDAV-LTGYLGSAEQVEAVAEIVKRLKEKNPNLLYVCDPVMGDNGKLYVVAEEIVPVYRDLLVPLADIITPNQFELEL 149 (254)
T ss_pred ccCCEE-EEecCCCHHHHHHHHHHHHHHHHhCCCceEEECCCCCcCCcceecChhHHHHHHHHHHhcCCEECCcHHHHHH
Confidence 456777 5677554 3457788888888875 5 3443 1 1124444 54 999999999
Q ss_pred HHHHcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCC------cEEEEECCeEEEEeccCCCCCC-cccCCCCchhh
Q psy6977 129 FAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDK------PIILSQNGKTTEFPVQRLPAES-VVDTNGAGDSF 201 (239)
Q Consensus 129 l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~------G~~~~~~~~~~~~~~~~~~~~~-vvdt~GaGDaf 201 (239)
|++....+.++.+++++++.++ |++.|++|.|.. |++++++++.++++.+.+ + ++|++||||+|
T Consensus 150 l~g~~~~~~~~~~~~~~~l~~~------g~~~Vvit~g~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~GaGD~f 220 (254)
T cd01173 150 LTGKKINDLEDAKAAARALHAK------GPKTVVVTSVELADDDRIEMLGSTATEAWLVQRPKI---PFPAYFNGTGDLF 220 (254)
T ss_pred HcCCCcCCHHHHHHHHHHHHHh------CCCEEEEEeeccCCCCcEEEEEEecCccEEEEeecc---CCCCCcCChHHHH
Confidence 9987443445677888888874 899999999985 788887776666777776 4 69999999999
Q ss_pred hHHHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 202 VGGFLSQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 202 ~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
+|||++++++|+++++|+++|++.-...+..
T Consensus 221 ~a~~~~~l~~g~~~~~a~~~A~~~~~~~i~~ 251 (254)
T cd01173 221 AALLLARLLKGKSLAEALEKALNFVHEVLEA 251 (254)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988776653
No 51
>cd00287 ribokinase_pfkB_like ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group. The superfamily includes ribokinase, fructokinase, ketohexokinase, 2-dehydro-3-deoxygluconokinase, 1-phosphofructokinase, the minor 6-phosphofructokinase (PfkB), inosine-guanosine kinase, and adenosine kinase. Even though there is a high degree of structural conservation within this superfamily, their multimerization level varies widely, monomeric (e.g. adenosine kinase), dimeric (e.g. ribokinase), and trimeric (e.g THZ kinase).
Probab=99.74 E-value=1.3e-17 Score=128.12 Aligned_cols=123 Identities=24% Similarity=0.349 Sum_probs=95.8
Q ss_pred eeEEEEeccccccChHHHHHHHHHhhhCC---CCCh---hh------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHH
Q psy6977 77 AEYYYVSGFFLTVSPESILEVAKVALSCT---IRNI---NY------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLH 141 (239)
Q Consensus 77 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~---p~------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~ 141 (239)
+++++++++.+. .+.+.++++.+++.+ ++|+ +. +.++++++ ++|.+|++.+++....+.++..
T Consensus 58 ~~~v~i~~~~~~--~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~~~~~dvl~~n~~E~~~l~~~~~~~~~~~~ 135 (196)
T cd00287 58 ADAVVISGLSPA--PEAVLDALEEARRRGVPVVLDPGPRAVRLDGEELEKLLPGVDILTPNEEEAEALTGRRDLEVKEAA 135 (196)
T ss_pred ccEEEEecccCc--HHHHHHHHHHHHHcCCeEEEeCCccccccccchHHHHHhhCCEECCCHHHHHHHhCCCCCChHHHH
Confidence 899999876543 367888899998877 5555 11 12456665 9999999999886433333445
Q ss_pred HHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEE-CCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHH
Q psy6977 142 AIALKISNLPKQNPNRERITIITQGDKPIILSQ-NGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLI 210 (239)
Q Consensus 142 ~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~-~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~ 210 (239)
+.++.+.+. |++.||+|+|++|+++++ ++..+++++++. +++||+||||+|+|||+++++
T Consensus 136 ~~~~~l~~~------g~~~vvvt~G~~g~~~~~~~~~~~~~~~~~~---~~vdt~GAGD~f~ag~~~~l~ 196 (196)
T cd00287 136 EAAALLLSK------GPKVVIVTLGEKGAIVATRGGTEVHVPAFPV---KVVDTTGAGDAFLAALAAGLA 196 (196)
T ss_pred HHHHHHHhc------CCCEEEEEECCCccEEEecCCceEEcCCccC---CcccCCCchHHHHHHHHHHhC
Confidence 667777764 889999999999999998 777778887766 799999999999999999874
No 52
>TIGR00687 pyridox_kin pyridoxal kinase. ThiD and related proteins form an outgroup.
Probab=99.74 E-value=4.2e-17 Score=132.58 Aligned_cols=148 Identities=14% Similarity=0.165 Sum_probs=108.8
Q ss_pred cccceeEEEEeccccc-cChHHHHHHHHHhhhCC-----CCCh------------hhHH-----HHhhHH---hcCHHHH
Q psy6977 73 LIQNAEYYYVSGFFLT-VSPESILEVAKVALSCT-----IRNI------------NYLH-----HRFIYL---VLIDFEA 126 (239)
Q Consensus 73 ~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~g-----~~~~------------p~~~-----~~~~~~---~~n~~E~ 126 (239)
.+.++|++ ++|+.+. ...+.+.++++.+++.+ ++|+ +.+. ++++++ ++|..|+
T Consensus 71 ~~~~~d~v-~~G~l~~~~~~~~~~~~l~~~~~~~~~~~vv~Dpv~~d~~~~~~~~~~~~~~~~~~ll~~adii~pN~~Ea 149 (286)
T TIGR00687 71 KLNQCDAV-LSGYLGSAEQVAMVVGIVRQVKQANPQALYVCDPVMGDPEKGCYVAPDLLEVYREKAIPVADIITPNQFEL 149 (286)
T ss_pred ccccCCEE-EECCCCCHHHHHHHHHHHHHHHHhCCCCcEEECCeeeeCCCCeeeChhHHHHHHHhccccccEecCCHHHH
Confidence 44678886 6687664 33467888888887654 2344 1111 344555 9999999
Q ss_pred HHHHHHcCCCccCHHHHHHHHhcCCCCCCCCceEEEEe-eCCCcE--------EEEECCeEEEEeccCCCCCC-cccCCC
Q psy6977 127 LAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIIT-QGDKPI--------ILSQNGKTTEFPVQRLPAES-VVDTNG 196 (239)
Q Consensus 127 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt-~G~~G~--------~~~~~~~~~~~~~~~~~~~~-vvdt~G 196 (239)
..|++....+.++..++++.++++ |++.||+| .|.+|+ +++++++.++.+.+++ + ++|++|
T Consensus 150 ~~L~g~~~~~~~~~~~~~~~l~~~------g~~~Viit~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~d~~G 220 (286)
T TIGR00687 150 ELLTGRKINTVEEALAAADALIAM------GPDIVLVTHLARAGSQRDRDFEGLVVTQEGRWHISRPLA---VFMRQPVG 220 (286)
T ss_pred HHHhCCCcCCHHHHHHHHHHHHHh------CCCEEEEEeccccCCCCCcceeEEEEcCCceEEEeccCc---CCCCCCCC
Confidence 999986433445566777888774 89999999 688775 4456566666766665 5 689999
Q ss_pred CchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Q psy6977 197 AGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHII 230 (239)
Q Consensus 197 aGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~ 230 (239)
|||+|+|+|++++++|.++++|+++|+++....+
T Consensus 221 aGD~f~A~~l~~l~~g~~~~~al~~A~~~v~~~l 254 (286)
T TIGR00687 221 TGDLIAALLLATLLHGNSLKEALEKTVSAVYHVL 254 (286)
T ss_pred hHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999844333
No 53
>PRK12412 pyridoxal kinase; Reviewed
Probab=99.73 E-value=1e-16 Score=128.95 Aligned_cols=145 Identities=19% Similarity=0.192 Sum_probs=111.3
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhCC----CCCh-h-----------hH-----HHHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSCT----IRNI-N-----------YL-----HHRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g----~~~~-p-----------~~-----~~~~~~~---~~n~~E~~~l~~ 131 (239)
+.+.+.+ |+. -+.+.+..+++.+++.+ ++|+ . .. .++++++ +||..|++.|++
T Consensus 72 ~~~~iki-G~l--~~~~~v~~i~~~~~~~~~~~vv~DPv~~~~~g~~~~~~~~~~~~~~~ll~~advitpN~~Ea~~L~g 148 (268)
T PRK12412 72 GVDALKT-GML--GSVEIIEMVAETIEKHNFKNVVVDPVMVCKGADEALHPETNDCLRDVLVPKALVVTPNLFEAYQLSG 148 (268)
T ss_pred CCCEEEE-CCC--CCHHHHHHHHHHHHhcCCCCEEECcCeeeCCCCcCCChHHHHHHHHhhhccceEEcCCHHHHHHHhC
Confidence 3788887 433 34577777777777665 4454 1 11 1355555 999999999998
Q ss_pred HcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcE------EEEECCeEEEEeccCCCCCCcccCCCCchhhhHHH
Q psy6977 132 QQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKPI------ILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGF 205 (239)
Q Consensus 132 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~------~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~ 205 (239)
....+.+++.++++.++++ |++.|+||.|+.|. +++.++..++++.+++ +.+||+||||+|+|+|
T Consensus 149 ~~~~~~~~~~~aa~~l~~~------g~~~ViIt~G~~g~~~~~~~~~~~~~~~~~~~~~~v---~~~~t~GaGD~f~aa~ 219 (268)
T PRK12412 149 VKINSLEDMKEAAKKIHAL------GAKYVLIKGGSKLGTETAIDVLYDGETFDLLESEKI---DTTNTHGAGCTYSAAI 219 (268)
T ss_pred cCCCCHHHHHHHHHHHHhc------CCCEEEEeccCCCCCCceEEEEEeCCEEEEEEeCcc---CCCCCCchHHHHHHHH
Confidence 6433445677888888874 99999999998753 4455566677888887 7899999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 206 LSQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 206 ~~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
++++++|+++++|+++|..+....+..
T Consensus 220 aa~l~~g~~l~eA~~~A~~~~~~~i~~ 246 (268)
T PRK12412 220 TAELAKGKPVKEAVKTAKEFITAAIRY 246 (268)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998888775
No 54
>TIGR00097 HMP-P_kinase phosphomethylpyrimidine kinase. This model represents phosphomethylpyrimidine kinase, the ThiD protein of thiamine biosynthesis. The protein is commonly observed within operons containing other thiamine biosynthesis genes. Numerous examples are fusion proteins with other thiamine-biosynthetic domains. Saccaromyces has three recent paralogs, two of which are isofunctional and score above the trusted cutoff. The third shows a longer branch length in a phylogenetic tree and scores below the trusted cutoff, as do putative second copies in a number of species.
Probab=99.72 E-value=2.6e-16 Score=125.76 Aligned_cols=145 Identities=18% Similarity=0.194 Sum_probs=112.1
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhCC----CCCh---h-------------hH-HHHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSCT----IRNI---N-------------YL-HHRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g----~~~~---p-------------~~-~~~~~~~---~~n~~E~~~l~~ 131 (239)
+.+.+.+ |+. .+.+.+..+++.+++.+ ++|+ + .+ .++++++ +||..|++.|++
T Consensus 67 ~~~aiki-G~l--~~~~~~~~i~~~~~~~~~~~vVlDPv~~~~~g~~l~~~~~~~~~~~~ll~~~dvitpN~~Ea~~L~g 143 (254)
T TIGR00097 67 PVDAAKT-GML--ASAEIVEAVARKLREYPVRPLVVDPVMVAKSGAPLLEEEAIEALRKRLLPLATLITPNLPEAEALLG 143 (254)
T ss_pred CCCEEEE-CCc--CCHHHHHHHHHHHHhcCCCcEEECCccccCCCCcCCCHHHHHHHHHhccccccEecCCHHHHHHHhC
Confidence 4677777 332 35677788888877664 4453 1 01 1355655 999999999998
Q ss_pred HcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCC----CcE-EEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHH
Q psy6977 132 QQNFQTEDLHAIALKISNLPKQNPNRERITIITQGD----KPI-ILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFL 206 (239)
Q Consensus 132 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~----~G~-~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~ 206 (239)
....+.++..++++.+.++ |++.|+||.|+ +|. +++++++.++++.+++ +++|++|+||+|.|+|+
T Consensus 144 ~~~~~~~~~~~~a~~l~~~------g~~~Vvvt~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~d~~GaGD~f~aala 214 (254)
T TIGR00097 144 TKIRTEQDMIKAAKKLREL------GPKAVLIKGGHLEGDQAVDVLFDGGEIHILKAPRI---ETKNTHGTGCTLSAAIA 214 (254)
T ss_pred CCCCCHHHHHHHHHHHHhc------CCCEEEEeCCCCCCCceeEEEEECCeEEEEEeccc---CCCCCCChHHHHHHHHH
Confidence 6433345677788888874 99999999997 344 6677777778888887 78999999999999999
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 207 SQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 207 ~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
+++++|+++++|+++|.+++...+.+
T Consensus 215 a~la~g~~l~eA~~~A~~~~~~~i~~ 240 (254)
T TIGR00097 215 ANLAKGLSLKEAVKEAKEFVTGAIRY 240 (254)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988875
No 55
>PRK12413 phosphomethylpyrimidine kinase; Provisional
Probab=99.71 E-value=1.5e-16 Score=127.16 Aligned_cols=146 Identities=18% Similarity=0.186 Sum_probs=103.3
Q ss_pred ceeEEEEe-ccccccChHHHHHHHHHhhh-CC---CCCh---hh-------------HHHHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVS-GFFLTVSPESILEVAKVALS-CT---IRNI---NY-------------LHHRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~-g~~~~~~~~~~~~~~~~~~~-~g---~~~~---p~-------------~~~~~~~~---~~n~~E~~~l~~ 131 (239)
..++..+. |+.+ +.+....+++..++ .+ ++|+ +. +.++++++ +||.+|++.|+|
T Consensus 68 ~~~~~~i~~G~l~--~~~~~~~~~~~~~~~~~~~vv~DPv~~~~~~~~~~~~~~~~~l~~ll~~~dli~pN~~E~~~L~g 145 (253)
T PRK12413 68 DVPFSAIKIGLLP--NVEIAEQALDFIKGHPGIPVVLDPVLVCKETHDVEVSELRQELIQFFPYVTVITPNLVEAELLSG 145 (253)
T ss_pred CCCCCEEEECCcC--CHHHHHHHHHHHHhCCCCCEEEcCceecCCCCccccHHHHHHHHHHhccCcEECCCHHHHHHHhC
Confidence 34444443 5543 33555566666653 34 5553 21 11456654 999999999998
Q ss_pred HcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCc-----E-EEEECCeEEEEeccCCCCCCcccCCCCchhhhHHH
Q psy6977 132 QQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKP-----I-ILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGF 205 (239)
Q Consensus 132 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G-----~-~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~ 205 (239)
....+.++..++++.++++ |++.|+||.|++| . +++++++ .+.+.+++ ..+|++||||+|+|+|
T Consensus 146 ~~~~~~~~~~~~a~~l~~~------g~~~Vvvt~g~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~GaGDaf~a~~ 215 (253)
T PRK12413 146 KEIKTLEDMKEAAKKLYDL------GAKAVVIKGGNRLSQKKAIDLFYDGKE-FVILESPV---LEKNNIGAGCTFASSI 215 (253)
T ss_pred cCCCCHHHHHHHHHHHHHc------CCCEEEEeCCCCCCCCcceEEEEcCCE-EEEEeecc---cCCCCCChHHHHHHHH
Confidence 7444445677788888874 8999999999864 2 3444444 44455555 6789999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhc
Q psy6977 206 LSQLIKGEPLSVCIECGVWAAQHIIQVS 233 (239)
Q Consensus 206 ~~~l~~g~~~~~a~~~a~~~a~~~~~~~ 233 (239)
++++.+|+++++|+++|.++-...+++.
T Consensus 216 ~~~l~~g~~l~ea~~~A~~~~~~~l~~~ 243 (253)
T PRK12413 216 ASQLVKGKSPLEAVKNSKDFVYQAIQQS 243 (253)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888777653
No 56
>cd01169 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1. The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction.
Probab=99.69 E-value=9.9e-16 Score=121.65 Aligned_cols=144 Identities=20% Similarity=0.192 Sum_probs=109.8
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhC-C---CCCh---h-------------hH-HHHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSC-T---IRNI---N-------------YL-HHRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-g---~~~~---p-------------~~-~~~~~~~---~~n~~E~~~l~~ 131 (239)
+++++.+ |+.. +.+.+..+.+.+++. + ++|+ + .+ ..+++++ +||..|++.|++
T Consensus 68 ~~~~i~~-G~l~--~~~~~~~i~~~~~~~~~~~vv~Dpv~~~~~~~~~~~~~~~~~~~~~ll~~~dvitpN~~Ea~~L~g 144 (242)
T cd01169 68 PVDAIKI-GMLG--SAEIIEAVAEALKDYPDIPVVLDPVMVAKSGDSLLDDDAIEALRELLLPLATLITPNLPEAELLTG 144 (242)
T ss_pred CCCEEEE-CCCC--CHHHHHHHHHHHHhCCCCcEEECCceeCCCCCcccCHHHHHHHHHHhhccCeEEeCCHHHHHHHhC
Confidence 5788887 5543 467777777777765 4 4554 1 01 1333555 999999999998
Q ss_pred HcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCc-----EEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHH
Q psy6977 132 QQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKP-----IILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFL 206 (239)
Q Consensus 132 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G-----~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~ 206 (239)
....+.++.+++++.+.++ |++.||||.|++| .+++++++.++++.+++ +++|++|+||+|+|+|+
T Consensus 145 ~~~~~~~~~~~~~~~l~~~------g~~~Vvit~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~GaGD~f~a~l~ 215 (242)
T cd01169 145 LEIATEEDMMKAAKALLAL------GAKAVLIKGGHLPGDEAVDVLYDGGGFFEFESPRI---DTKNTHGTGCTLSSAIA 215 (242)
T ss_pred CCCCCHHHHHHHHHHHHhc------CCCEEEEecCCCCCCceeEEEEECCcEEEEeccee---CCCCCCChHHHHHHHHH
Confidence 6433334566677777774 8999999999885 36667777778888877 68999999999999999
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHHH
Q psy6977 207 SQLIKGEPLSVCIECGVWAAQHIIQ 231 (239)
Q Consensus 207 ~~l~~g~~~~~a~~~a~~~a~~~~~ 231 (239)
+++++|.++++|+++|+..-...+.
T Consensus 216 a~l~~g~~~~~A~~~A~~~~~~~i~ 240 (242)
T cd01169 216 ANLAKGLSLEEAVREAKEYVTQAIR 240 (242)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998776654
No 57
>PRK06427 bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed
Probab=99.68 E-value=1e-15 Score=123.18 Aligned_cols=146 Identities=20% Similarity=0.189 Sum_probs=110.3
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhCC----CCCh---h-------------hHH-HHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSCT----IRNI---N-------------YLH-HRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g----~~~~---p-------------~~~-~~~~~~---~~n~~E~~~l~~ 131 (239)
+.+.+.+ |+.. +.+.+..+++.+++.+ ++|+ + .+. ++++++ +||..|++.|++
T Consensus 73 ~~~ai~i-G~l~--~~~~~~~i~~~~~~~~~~~vv~DPv~~~~~~~~~~~~~~~~~~~~~ll~~~dvitpN~~Ea~~L~g 149 (266)
T PRK06427 73 RIDAVKI-GMLA--SAEIIETVAEALKRYPIPPVVLDPVMIAKSGDPLLADDAVAALRERLLPLATLITPNLPEAEALTG 149 (266)
T ss_pred CCCEEEE-CCcC--CHHHHHHHHHHHHhCCCCCEEEcCccccCCCCcCCCHHHHHHHHHhhhCcCeEEcCCHHHHHHHhC
Confidence 5677777 4433 4667777777777654 4443 1 111 355554 999999999998
Q ss_pred HcCCCccC-HHHHHHHHhcCCCCCCCCceEEEEeeCC--CcE----EEEECCeEEEEeccCCCCCCcccCCCCchhhhHH
Q psy6977 132 QQNFQTED-LHAIALKISNLPKQNPNRERITIITQGD--KPI----ILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGG 204 (239)
Q Consensus 132 ~~~~~~~~-~~~~~~~l~~~~~~~~~g~~~vvvt~G~--~G~----~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag 204 (239)
....+.++ .+++++.+.++ |++.||||.|+ +|. +++++++.++++.+++ +.+|++|+||+|+|+
T Consensus 150 ~~~~~~~~~~~~~a~~l~~~------g~~~Vvit~g~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~GaGD~f~a~ 220 (266)
T PRK06427 150 LPIADTEDEMKAAARALHAL------GCKAVLIKGGHLLDGEESVDWLFDGEGEERFSAPRI---PTKNTHGTGCTLSAA 220 (266)
T ss_pred CCCCCcHHHHHHHHHHHHhc------CCCEEEEcCCCCCCCCceeEEEEeCCcEEEEEeeeE---CCCCCCChHHHHHHH
Confidence 63222233 67788888874 89999999998 553 5667666677888777 788999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhc
Q psy6977 205 FLSQLIKGEPLSVCIECGVWAAQHIIQVS 233 (239)
Q Consensus 205 ~~~~l~~g~~~~~a~~~a~~~a~~~~~~~ 233 (239)
|++++++|.++++|+++|+.....++.+.
T Consensus 221 l~~~l~~g~~l~~A~~~A~~~~~~~i~~~ 249 (266)
T PRK06427 221 IAAELAKGASLLDAVQTAKDYVTRAIRHA 249 (266)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998888763
No 58
>PRK08176 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed
Probab=99.66 E-value=3.4e-15 Score=120.91 Aligned_cols=147 Identities=14% Similarity=0.144 Sum_probs=104.2
Q ss_pred ccceeEEEEecccccc-ChHHHHHHHHHhhh--CC---CCCh---h-------------hHH-HHhhHH---hcCHHHHH
Q psy6977 74 IQNAEYYYVSGFFLTV-SPESILEVAKVALS--CT---IRNI---N-------------YLH-HRFIYL---VLIDFEAL 127 (239)
Q Consensus 74 ~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~--~g---~~~~---p-------------~~~-~~~~~~---~~n~~E~~ 127 (239)
+.++|.+++ |+..+. ..+.+.+.++..+. .+ ++|+ + .+. ++++++ +||..|++
T Consensus 86 l~~~d~i~~-G~l~s~~~~~~i~~~l~~~~~~~~~~~vv~DPvm~d~~~~~~~~~~~~~~~~~~Ll~~advitPN~~Ea~ 164 (281)
T PRK08176 86 LRQLRAVTT-GYMGSASQIKILAEWLTALRADHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQHLLPLAQGLTPNIFELE 164 (281)
T ss_pred cccCCEEEE-CCCCCHHHHHHHHHHHHHHHHHCCCCcEEeCCccccCCCCeEECccHHHHHHHHhHhhcCEeCCCHHHHH
Confidence 457899987 655431 12344555544432 23 3443 1 121 466666 99999999
Q ss_pred HHHHHcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCc-------EEEEECCeEEEEeccCCCCCCcccCCCCchh
Q psy6977 128 AFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKP-------IILSQNGKTTEFPVQRLPAESVVDTNGAGDS 200 (239)
Q Consensus 128 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G-------~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDa 200 (239)
.|+|....+.++..+++++++++ |++.||||.|+.| ++++++++.+..+.+. ..+|++|+||+
T Consensus 165 ~L~g~~~~~~~~~~~~~~~l~~~------g~~~VvIT~g~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~GaGD~ 234 (281)
T PRK08176 165 ILTGKPCRTLDSAIAAAKSLLSD------TLKWVVITSAAGNEENQEMQVVVVTADSVNVISHPR----VDTDLKGTGDL 234 (281)
T ss_pred HHhCCCCCCHHHHHHHHHHHHhc------CCCEEEEeeccCCCCCCcEEEEEEeCCceEEEecCc----cCCCCCChhHH
Confidence 99986433344566778888874 9999999999988 5667766654444333 45799999999
Q ss_pred hhHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Q psy6977 201 FVGGFLSQLIKGEPLSVCIECGVWAAQHIIQ 231 (239)
Q Consensus 201 f~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~ 231 (239)
|+|+|++++++|.++++|+++|...-...+.
T Consensus 235 faa~~~a~l~~g~~l~~Av~~A~~~v~~~i~ 265 (281)
T PRK08176 235 FCAELVSGLLKGKALTDAAHRAGLRVLEVMR 265 (281)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999987766664
No 59
>PRK07105 pyridoxamine kinase; Validated
Probab=99.66 E-value=2.2e-15 Score=122.37 Aligned_cols=147 Identities=15% Similarity=0.212 Sum_probs=104.7
Q ss_pred ceeEEEEecccccc-ChHHHHHHHHHhhhCC---CCCh---h--------------hHHHHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTV-SPESILEVAKVALSCT---IRNI---N--------------YLHHRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~g---~~~~---p--------------~~~~~~~~~---~~n~~E~~~l~~ 131 (239)
.++.+.+ |+.... .-+.+.++++.+++.+ ++|+ + .+.++++++ +||..|+..|++
T Consensus 75 ~~~aik~-G~l~~~~~~~~v~~~~~~~~~~~~~vv~DPv~~~~~~l~~~~~~~~~~~~~~ll~~advitpN~~Ea~~L~g 153 (284)
T PRK07105 75 KFDAIYS-GYLGSPRQIQIVSDFIKYFKKKDLLVVVDPVMGDNGKLYQGFDQEMVEEMRKLIQKADVITPNLTEACLLLD 153 (284)
T ss_pred ccCEEEE-CcCCCHHHHHHHHHHHHHhccCCCeEEECCccccCCcCCCCCCHHHHHHHHHHHhhCCEecCCHHHHHHHcC
Confidence 6788776 654431 1234445555445444 4444 1 112566666 999999999988
Q ss_pred HcCC----CccCHHHHHHHHhcCCCCCCCCceEEEEee-----CCCcEEEEECC--eEEEEeccCCCCCCcccCCCCchh
Q psy6977 132 QQNF----QTEDLHAIALKISNLPKQNPNRERITIITQ-----GDKPIILSQNG--KTTEFPVQRLPAESVVDTNGAGDS 200 (239)
Q Consensus 132 ~~~~----~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~-----G~~G~~~~~~~--~~~~~~~~~~~~~~vvdt~GaGDa 200 (239)
.... +.+++.++++.+.++ |++.||||. |..|+++++++ ..++.+.+.+ .+|++||||+
T Consensus 154 ~~~~~~~~~~~~~~~~a~~l~~~------g~~~Vvvt~~~~~~g~~g~~~~~~~~~~~~~~~~~~~----~~~~~GaGD~ 223 (284)
T PRK07105 154 KPYLEKSYSEEEIKQLLRKLADL------GPKIVIITSVPFEDGKIGVAYYDRATDRFWKVFCKYI----PAHYPGTGDI 223 (284)
T ss_pred CCcCcCCCCHHHHHHHHHHHHhc------CCCEEEEcCeeeCCCeEEEEEEeCCCCeEEEEeeccc----CCCcCChhHH
Confidence 6321 234566777777764 899999999 67788888653 3455555543 4799999999
Q ss_pred hhHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhc
Q psy6977 201 FVGGFLSQLIKGEPLSVCIECGVWAAQHIIQVS 233 (239)
Q Consensus 201 f~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~~~ 233 (239)
|+|+|++++++|+++++|+++|..+....+.+.
T Consensus 224 f~aa~~~~l~~g~~l~~av~~A~~~~~~~i~~~ 256 (284)
T PRK07105 224 FTSVITGSLLQGDSLPIALDRAVQFIEKGIRAT 256 (284)
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998888754
No 60
>PRK08573 phosphomethylpyrimidine kinase; Provisional
Probab=99.65 E-value=2.4e-15 Score=129.10 Aligned_cols=135 Identities=21% Similarity=0.175 Sum_probs=106.4
Q ss_pred ChHHHHHHHHHhhhCC---CCCh---h-----h--------H-HHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHH
Q psy6977 90 SPESILEVAKVALSCT---IRNI---N-----Y--------L-HHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALK 146 (239)
Q Consensus 90 ~~~~~~~~~~~~~~~g---~~~~---p-----~--------~-~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~ 146 (239)
+.+.+..+++.+++.+ ++|+ + . + .++++++ ++|..|+..|+|....+.++.+++++.
T Consensus 82 ~~e~~~~i~~~~k~~g~~vv~DPv~~~~sG~~l~~~~~~~~l~~~llp~adli~pN~~Ea~~L~g~~i~~~~d~~~aa~~ 161 (448)
T PRK08573 82 NREIIEAVAKTVSKYGFPLVVDPVMIAKSGAPLLREDAVDALIKRLLPLATVVTPNRPEAEKLTGMKIRSVEDARKAAKY 161 (448)
T ss_pred CHHHHHHHHHHHHHcCCCEEEcCccccCCCCcCCCHHHHHHHHHhhhccCEEEcCCHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 4688889999999887 4553 1 1 1 2455654 999999999998643344567778888
Q ss_pred HhcCCCCCCCCceEEEEeeCC----CcE-EEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHH
Q psy6977 147 ISNLPKQNPNRERITIITQGD----KPI-ILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIEC 221 (239)
Q Consensus 147 l~~~~~~~~~g~~~vvvt~G~----~G~-~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~ 221 (239)
+.+. .|++.|+||.|. +++ +++.+++.++++.+++ +++|++||||+|+|+|++++++|+++++|+++
T Consensus 162 L~~~-----~G~~~VvVt~G~~~g~~~~~~~~~~~~~~~~~~~~v---~~~dt~GAGDaFsAa~aa~l~~G~~l~eAl~~ 233 (448)
T PRK08573 162 IVEE-----LGAEAVVVKGGHLEGEEAVDVLYHNGTFREFRAPRV---ESGCTHGTGCSFSAAIAAGLAKGLDPEEAIKT 233 (448)
T ss_pred HHHH-----cCCCEEEEecccCCCCceeEEEEECCeEEEEEecCc---CCCCCCChHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 8742 389999999985 344 4556667778888887 78999999999999999999999999999999
Q ss_pred HHHHHHHHHHh
Q psy6977 222 GVWAAQHIIQV 232 (239)
Q Consensus 222 a~~~a~~~~~~ 232 (239)
|+.+....+..
T Consensus 234 A~~~~~~al~~ 244 (448)
T PRK08573 234 AKKFITMAIKY 244 (448)
T ss_pred HHHHHHHHHHH
Confidence 99998888883
No 61
>PRK12616 pyridoxal kinase; Reviewed
Probab=99.64 E-value=5.8e-15 Score=118.92 Aligned_cols=145 Identities=19% Similarity=0.149 Sum_probs=108.3
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhCC----CCCh-h---------------hHH-HHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSCT----IRNI-N---------------YLH-HRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g----~~~~-p---------------~~~-~~~~~~---~~n~~E~~~l~~ 131 (239)
+.+.+.+ |+.. +.+.+..+.+.+++.+ ++|+ . .+. .+++++ +||..|++.|++
T Consensus 74 ~~~aiki-G~l~--s~~~i~~i~~~l~~~~~~~vV~DPV~~~~~g~~~l~~~~~~~l~~~L~~~advitpN~~Ea~~L~g 150 (270)
T PRK12616 74 GVDAMKT-GMLP--TVDIIELAADTIKEKQLKNVVIDPVMVCKGANEVLYPEHAEALREQLAPLATVITPNLFEAGQLSG 150 (270)
T ss_pred CCCEEEE-CCCC--CHHHHHHHHHHHHhcCCCCEEEccceecCCCCcccCHHHHHHHHHHhhccceEecCCHHHHHHHcC
Confidence 4677777 5443 3466666666666554 4454 1 011 345444 999999999987
Q ss_pred H-cCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcE------EEEECCeEEEEeccCCCCCCcccCCCCchhhhHH
Q psy6977 132 Q-QNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKPI------ILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGG 204 (239)
Q Consensus 132 ~-~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~------~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag 204 (239)
. ...+.+++.++++.+.++ |++.||||.|..|. +++++++.++++.+++ +.+|++|+||+|.|+
T Consensus 151 ~~~~~~~~~~~~aa~~l~~~------G~~~VvVt~G~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~t~GaGD~fsaa 221 (270)
T PRK12616 151 MGEIKTVEQMKEAAKKIHEL------GAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMI---DTPYTHGAGCTFSAA 221 (270)
T ss_pred CCCCCCHHHHHHHHHHHHHc------CCCEEEEeCCCCCcCCceEEEEEECCeEEEEEeeee---CCCCCCcHHHHHHHH
Confidence 5 233445677888888874 99999999998762 5566666677787777 788999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 205 FLSQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 205 ~~~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
|++++++|.++++|+++|.......+..
T Consensus 222 laa~l~~g~~l~~Av~~A~~~~~~~i~~ 249 (270)
T PRK12616 222 VTAELAKGSEVKEAIYAAKEFITAAIKE 249 (270)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988877765
No 62
>PTZ00344 pyridoxal kinase; Provisional
Probab=99.48 E-value=1.1e-12 Score=107.13 Aligned_cols=108 Identities=19% Similarity=0.198 Sum_probs=79.5
Q ss_pred HHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhcCCCCCCCCceEEEEe---eCCCc----EEEEEC------Ce
Q psy6977 114 HRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIIT---QGDKP----IILSQN------GK 177 (239)
Q Consensus 114 ~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt---~G~~G----~~~~~~------~~ 177 (239)
++++++ ++|.+|+..|+|....+.++..++++.+.+. |++.|||| .|.+| +++.+. ++
T Consensus 135 ~ll~~~dii~pN~~E~~~L~g~~~~~~~~~~~~~~~l~~~------g~~~VvVTg~~~~~~g~~~~~l~~~~~~~~~~~~ 208 (296)
T PTZ00344 135 ELIPYADVITPNQFEASLLSGVEVKDLSDALEAIDWFHEQ------GIPVVVITSFREDEDPTHLRFLLSCRDKDTKNNK 208 (296)
T ss_pred HHhhhCCEEeCCHHHHHHHhCCCCCCHHHHHHHHHHHHHh------CCCEEEEEeecCCCCCCcEEEEEEeccccCCCce
Confidence 455555 9999999999986333334566677778774 89999999 55566 444431 23
Q ss_pred EEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 178 TTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 178 ~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
.+....|++ + ++++|+||+|+|+|++.+.+| ++++|+++|.+.-...+..
T Consensus 209 ~~~~~~~~~---~-~~~~GaGD~f~A~~~a~l~~g-~~~~a~~~A~a~~~~~i~~ 258 (296)
T PTZ00344 209 RFTGKVPYI---E-GRYTGTGDLFAALLLAFSHQH-PMDLAVGKAMGVLQDIIKA 258 (296)
T ss_pred eEEEecccc---C-CCCCCchHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHH
Confidence 455666665 3 577999999999999778888 9999999998877766544
No 63
>PLN02898 HMP-P kinase/thiamin-monophosphate pyrophosphorylase
Probab=99.46 E-value=1.7e-12 Score=113.29 Aligned_cols=146 Identities=16% Similarity=0.189 Sum_probs=108.7
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhCC----CCCh------------h----hHH-HHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSCT----IRNI------------N----YLH-HRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g----~~~~------------p----~~~-~~~~~~---~~n~~E~~~l~~ 131 (239)
+.+.+.+ |+.. +.+.+..+++.+++.+ ++|+ + .+. ++++++ +||..|++.|++
T Consensus 78 ~~~aik~-G~l~--~~~~i~~i~~~l~~~~~~~vVlDPV~~~~~G~~l~~~~~~~~l~~~Ll~~adiitPN~~Ea~~L~g 154 (502)
T PLN02898 78 PVDVVKT-GMLP--SAEIVKVLCQALKEFPVKALVVDPVMVSTSGDVLAGPSILSALREELLPLATIVTPNVKEASALLG 154 (502)
T ss_pred CCCEEEE-CCcC--CHHHHHHHHHHHHhCCCCCEEEccccccCCCCccCCHHHHHHHHHhhhccCeEEcCCHHHHHHHhC
Confidence 4566666 5443 3677777777777664 3333 0 111 445544 999999999987
Q ss_pred Hc-CCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCc------EEEEECCeEEEEeccCCCCCCcccCCCCchhhhHH
Q psy6977 132 QQ-NFQTEDLHAIALKISNLPKQNPNRERITIITQGDKP------IILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGG 204 (239)
Q Consensus 132 ~~-~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G------~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag 204 (239)
.. ..+.++..++++.+.++ |++.||||.|..+ .+++++++.++++.+++ +.+|++|+||+|.|+
T Consensus 155 ~~~~~~~~~~~~~a~~l~~~------G~~~VvItgg~~~~~~~~~~~l~~~~~~~~~~~~~i---~~~~t~GaGD~fsaa 225 (502)
T PLN02898 155 GDPLETVADMRSAAKELHKL------GPRYVLVKGGHLPDSLDAVDVLYDGTEFHELRSSRI---KTRNTHGTGCTLASC 225 (502)
T ss_pred CCCCCCHHHHHHHHHHHHhc------CCCEEEEcCCCCCCCCcceEEEEcCCeEEEEeccee---CCCCCCchhhhHHHH
Confidence 42 12334567778888774 8999999999753 35566666677887777 678999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhc
Q psy6977 205 FLSQLIKGEPLSVCIECGVWAAQHIIQVS 233 (239)
Q Consensus 205 ~~~~l~~g~~~~~a~~~a~~~a~~~~~~~ 233 (239)
|++++++|+++++|+++|..+....+.+.
T Consensus 226 iaa~l~~G~~l~eAv~~A~~~v~~ai~~~ 254 (502)
T PLN02898 226 IAAELAKGSDMLSAVKVAKRYVETALEYS 254 (502)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999888764
No 64
>PTZ00347 phosphomethylpyrimidine kinase; Provisional
Probab=99.42 E-value=1.1e-12 Score=114.44 Aligned_cols=150 Identities=15% Similarity=0.155 Sum_probs=105.5
Q ss_pred hcccceeEEEE-eccccccChHHHHHHHHHhhhCC-CCCh-h------h----------HH----HHhhHH---hcCHHH
Q psy6977 72 KLIQNAEYYYV-SGFFLTVSPESILEVAKVALSCT-IRNI-N------Y----------LH----HRFIYL---VLIDFE 125 (239)
Q Consensus 72 ~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g-~~~~-p------~----------~~----~~~~~~---~~n~~E 125 (239)
.++++.++..+ .|+.. +.+.+..+++.++... ++|+ . . +. ++++++ +||..|
T Consensus 293 ~l~~d~~~~~Ik~G~l~--s~e~i~~i~~~l~~~~vV~DPV~~~~~G~~l~~~~~~~~~~~~~~~~Ll~~advitPN~~E 370 (504)
T PTZ00347 293 SVMSDFNISVVKLGLVP--TARQLEIVIEKLKNLPMVVDPVLVATSGDDLVAQKNADDVLAMYKERIFPMATIITPNIPE 370 (504)
T ss_pred HHHhCCCCCEEEECCcC--CHHHHHHHHHHhcCCCEEEcccceeCCCCcccchhHHHHHHHHHHHhccCcceEEeCCHHH
Confidence 34444443333 46544 3677777777776333 4553 0 0 10 344544 999999
Q ss_pred HHHHHHHc-CCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCc-------EEEEEC--CeEEEEeccCCCCCCcccCC
Q psy6977 126 ALAFAKQQ-NFQTEDLHAIALKISNLPKQNPNRERITIITQGDKP-------IILSQN--GKTTEFPVQRLPAESVVDTN 195 (239)
Q Consensus 126 ~~~l~~~~-~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G-------~~~~~~--~~~~~~~~~~~~~~~vvdt~ 195 (239)
++.|+|.. ..+.++..++++.+.++ |++.||||.|.+| .+++.+ ++.++++.+++ +++|++
T Consensus 371 a~~L~g~~~~~~~~~~~~aa~~l~~~------G~~~VvVtgg~~~~~~~~~~~~l~~~~~~~~~~~~~~~i---~~~~~~ 441 (504)
T PTZ00347 371 AERILGRKEITGVYEARAAAQALAQY------GSRYVLVKGGHDLIDPEACRDVLYDREKDRFYEFTANRI---ATINTH 441 (504)
T ss_pred HHHHhCCCCCCCHHHHHHHHHHHHhc------CCCEEEEeCCCCCcCCCcceEEEEcCCCCeEEEEEeeeE---CCCCCC
Confidence 99999852 22334566777888774 9999999999863 344443 35677888877 789999
Q ss_pred CCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 196 GAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 196 GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
|+||+|+|+|++++++|.++++|+++|...-...+..
T Consensus 442 GaGD~fsaaiaa~la~G~~l~eAv~~A~~~v~~~i~~ 478 (504)
T PTZ00347 442 GTGCTLASAISSFLARGYTVPDAVERAIGYVHEAIVR 478 (504)
T ss_pred ChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999998877766654
No 65
>cd01171 YXKO-related B.subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily.
Probab=99.36 E-value=1e-11 Score=99.37 Aligned_cols=148 Identities=14% Similarity=0.077 Sum_probs=104.0
Q ss_pred hcccceeEEEEeccccccCh-HHHHHHHHHhhhCC---CCCh-hh--HHH-----HhhHH---hcCHHHHHHHHHHcCCC
Q psy6977 72 KLIQNAEYYYVSGFFLTVSP-ESILEVAKVALSCT---IRNI-NY--LHH-----RFIYL---VLIDFEALAFAKQQNFQ 136 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~g---~~~~-p~--~~~-----~~~~~---~~n~~E~~~l~~~~~~~ 136 (239)
..+.+.++++++.. ++. +.+..+++.+++.+ ++|. .. +.. +.+.. +||..|++.|++....+
T Consensus 73 ~~~~~~d~v~ig~g---l~~~~~~~~i~~~~~~~~~pvVlDa~~~~~~~~~~~~~~~~~~~iltPn~~E~~~L~g~~~~~ 149 (254)
T cd01171 73 ELLERADAVVIGPG---LGRDEEAAEILEKALAKDKPLVLDADALNLLADEPSLIKRYGPVVLTPHPGEFARLLGALVEE 149 (254)
T ss_pred hhhccCCEEEEecC---CCCCHHHHHHHHHHHhcCCCEEEEcHHHHHhhcChhhhccCCCEEECCCHHHHHHHhCCChhh
Confidence 45678899999542 333 67788888888776 6676 21 221 22332 99999999999863211
Q ss_pred -ccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCH
Q psy6977 137 -TEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPL 215 (239)
Q Consensus 137 -~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~ 215 (239)
.++..++++.+.++ + +.+|+..|. +.+++++++.+++..+.. +.+++.|+||+|.|.+.+.+.+|.++
T Consensus 150 ~~~~~~~~a~~l~~~------~-~~~vvlkG~-~~~i~~~~~~~~~~~~~~---~~~~~~GaGD~lag~iaa~la~g~~~ 218 (254)
T cd01171 150 IQADRLAAAREAAAK------L-GATVVLKGA-VTVIADPDGRVYVNPTGN---PGLATGGSGDVLAGIIAALLAQGLSP 218 (254)
T ss_pred hhhHHHHHHHHHHHH------c-CcEEEEcCC-CCEEECCCCcEEEECCCC---cccccCchHHHHHHHHHHHHHcCCCH
Confidence 23455677777774 4 355556675 555566544455666665 78899999999988888888899999
Q ss_pred HHHHHHHHHHHHHHHHhc
Q psy6977 216 SVCIECGVWAAQHIIQVS 233 (239)
Q Consensus 216 ~~a~~~a~~~a~~~~~~~ 233 (239)
.+|+++|+.+.+.+.+..
T Consensus 219 ~eA~~~A~~~~~~a~~~~ 236 (254)
T cd01171 219 LEAAALAVYLHGLAGDLA 236 (254)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999888887653
No 66
>PRK09517 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional
Probab=99.32 E-value=3.3e-11 Score=109.66 Aligned_cols=145 Identities=14% Similarity=0.169 Sum_probs=105.6
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhCC----CCCh-h---------------hHHHHhhHH---hcCHHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSCT----IRNI-N---------------YLHHRFIYL---VLIDFEALAFAKQ 132 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g----~~~~-p---------------~~~~~~~~~---~~n~~E~~~l~~~ 132 (239)
+.+.+-+ |+. -+.+.+..+++.+++.+ ++|+ . .+.++++.+ +||..|+..|+|.
T Consensus 310 ~~~aiKi-GmL--~s~e~v~~i~~~l~~~~~~~vVlDPV~~~~sG~~l~~~~~~~~l~~Llp~adlItPN~~Ea~~L~g~ 386 (755)
T PRK09517 310 TVDAVKL-GML--GSADTVDLVASWLGSHEHGPVVLDPVMVATSGDRLLDADATEALRRLAVHVDVVTPNIPELAVLCGE 386 (755)
T ss_pred CCCEEEE-CCC--CCHHHHHHHHHHHHhCCCCCEEEecccccCCCCCCCCHHHHHHHHHHhCcccCccCCHHHHHHHhCC
Confidence 4567776 433 24567777777777642 5554 1 122455555 9999999999984
Q ss_pred c-CCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCC------CcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHH
Q psy6977 133 Q-NFQTEDLHAIALKISNLPKQNPNRERITIITQGD------KPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGF 205 (239)
Q Consensus 133 ~-~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~------~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~ 205 (239)
. ..+.++..++++.+.+. .| ..||||.|. .++++..++..++++.+++ +.+||+|+||+|.|+|
T Consensus 387 ~~~~~~~d~~~aa~~L~~~-----~g-~~VVVkgGh~~~~~~~~~l~~~~~~~~~~~~~~v---~~~~t~GaGDtfsaai 457 (755)
T PRK09517 387 APAITMDEAIAQARGFART-----HG-TIVIVKGGHLTGDLADNAVVRPDGSVHQVENPRV---NTTNSHGTGCSLSAAL 457 (755)
T ss_pred CCCCCHHHHHHHHHHHHHh-----cC-CEEEEcCCcCCCCccceEEEeCCCeEEEEeeccc---CCCCCcChHHHHHHHH
Confidence 2 12334566677777664 14 489999983 4666665555678888887 7899999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 206 LSQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 206 ~~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
++++++|.++++|+++|...-...+.+
T Consensus 458 aa~La~G~sl~eAv~~A~~~v~~~i~~ 484 (755)
T PRK09517 458 ATLIAAGESVEKALEWATRWLNEALRH 484 (755)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999988877765
No 67
>COG0351 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism]
Probab=99.31 E-value=4.2e-11 Score=93.90 Aligned_cols=144 Identities=19% Similarity=0.173 Sum_probs=112.0
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhCC----CCCh--------hh--------H-HHHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSCT----IRNI--------NY--------L-HHRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g----~~~~--------p~--------~-~~~~~~~---~~n~~E~~~l~~ 131 (239)
+++.+-+ | +--+.+++..+.+..++++ ++|+ +. + .+++|++ .||..|++.|+|
T Consensus 72 ~v~avKt-G--ML~~~eiie~va~~l~~~~~~~vV~DPVmvaksG~~Ll~~~a~~~l~~~LlP~a~vvTPNl~EA~~L~g 148 (263)
T COG0351 72 PVDAVKT-G--MLGSAEIIEVVAEKLKKYGIGPVVLDPVMVAKSGDPLLDEEAVEALREELLPLATVVTPNLPEAEALSG 148 (263)
T ss_pred CCCEEEE-C--CcCCHHHHHHHHHHHHhcCCCcEEECceEEEcCCCcccChHHHHHHHHHhhccCeEecCCHHHHHHHcC
Confidence 4556655 2 2234677777777777766 4444 11 1 1677777 899999999999
Q ss_pred H-cCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCc----EEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHH
Q psy6977 132 Q-QNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKP----IILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFL 206 (239)
Q Consensus 132 ~-~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G----~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~ 206 (239)
. ...+.++..++++.+.++ |++.|+|+-|... -++|+++..+.+..|.+ .-.+|-|+|++|.|++.
T Consensus 149 ~~~i~~~~d~~~a~~~i~~~------g~~~VliKGGH~~~~~~D~l~~~~~~~~f~~~ri---~t~~tHGTGCTlSaAIa 219 (263)
T COG0351 149 LPKIKTEEDMKEAAKLLHEL------GAKAVLIKGGHLEGEAVDVLYDGGSFYTFEAPRI---PTKNTHGTGCTLSAAIA 219 (263)
T ss_pred CCccCCHHHHHHHHHHHHHh------CCCEEEEcCCCCCCCceeEEEcCCceEEEecccc---CCCCCCCccHHHHHHHH
Confidence 4 555677788887778785 9999999987643 35667777888889988 67789999999999999
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHHH
Q psy6977 207 SQLIKGEPLSVCIECGVWAAQHIIQ 231 (239)
Q Consensus 207 ~~l~~g~~~~~a~~~a~~~a~~~~~ 231 (239)
+.|++|.++++|++.|-..-..+++
T Consensus 220 a~LA~G~~l~~AV~~Ak~fv~~AI~ 244 (263)
T COG0351 220 ANLAKGLSLEEAVKKAKEFVTRAIR 244 (263)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999988877776
No 68
>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2.7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D ....
Probab=99.30 E-value=3.1e-11 Score=95.97 Aligned_cols=144 Identities=18% Similarity=0.172 Sum_probs=100.7
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhCC---CCCh----------------hhHH-HHhhHH---hcCHHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSCT---IRNI----------------NYLH-HRFIYL---VLIDFEALAFAKQ 132 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~----------------p~~~-~~~~~~---~~n~~E~~~l~~~ 132 (239)
+.+.+.+ |+.. +.+.+..+.+..++.+ ++|+ +.+. +++|++ .||..|+..|++.
T Consensus 60 ~~~aiki-G~l~--~~~~v~~i~~~l~~~~~~vV~DPVm~~~~g~~~~~~~~~~~~~~~Llp~AdiitPN~~Ea~~L~g~ 136 (246)
T PF08543_consen 60 KFDAIKI-GYLG--SAEQVEIIADFLKKPKIPVVLDPVMGDSGGYYYVDPDVVEAMREELLPLADIITPNLTEAELLTGR 136 (246)
T ss_dssp C-SEEEE--S-S--SHHHHHHHHHHHHHTTTEEEEE---EETTTECTSSHHHHHHHHHHCGGG-SEEE-BHHHHHHHHTS
T ss_pred cccEEEE-cccC--CchhhhhHHHHHhccCCCEEEecccccCCCCcCCCHHHHHHHHhccCCcCeEEeCCHHHHHHHhCC
Confidence 6788887 5543 3455555555554444 3333 1112 477777 9999999999996
Q ss_pred cCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCC----c---EEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHH
Q psy6977 133 QNFQTEDLHAIALKISNLPKQNPNRERITIITQGDK----P---IILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGF 205 (239)
Q Consensus 133 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~----G---~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~ 205 (239)
...+.+++.+++++++++ |++.||||-+.. + -+++++++.+.+..+.+ +..+..|.||.|.|++
T Consensus 137 ~i~~~~~~~~~~~~l~~~------G~~~VvItg~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~GTGd~fss~l 207 (246)
T PF08543_consen 137 EINSEEDIEEAAKALLAL------GPKNVVITGGHLDGDEGIITDVLYDGGEFYWLSSPRI---PTGSFHGTGDLFSSAL 207 (246)
T ss_dssp --SSHHHHHHHHHHHHHT------S-SEEEEEEEEGGSSCEEEEEEEETTSEEEEEEEEEE---CTSGCTTHHHHHHHHH
T ss_pred CCCChHhHHHHHHHHHHh------CCceEEEeeeccccccccccceeeeccceeecceeEE---cCCCCCCchhHHHHHH
Confidence 555667788899999995 999999998763 2 23445677777777766 3467899999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHH
Q psy6977 206 LSQLIKGEPLSVCIECGVWAAQHIIQ 231 (239)
Q Consensus 206 ~~~l~~g~~~~~a~~~a~~~a~~~~~ 231 (239)
+..|++|.++++|++.|...-...+.
T Consensus 208 aa~l~~g~~l~~Av~~A~~~v~~~i~ 233 (246)
T PF08543_consen 208 AAFLAKGYSLEEAVEKAKNFVRRAIK 233 (246)
T ss_dssp HHHHHTTSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999887766665
No 69
>TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related. The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis.
Probab=99.28 E-value=8e-11 Score=95.08 Aligned_cols=148 Identities=12% Similarity=-0.009 Sum_probs=101.6
Q ss_pred hcccceeEEEEeccccccChHHHHHHHHHhhhCC---CCCh--hhHH-HH-----hhHH-hcCHHHHHHHHHHcCCCccC
Q psy6977 72 KLIQNAEYYYVSGFFLTVSPESILEVAKVALSCT---IRNI--NYLH-HR-----FIYL-VLIDFEALAFAKQQNFQTED 139 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~--p~~~-~~-----~~~~-~~n~~E~~~l~~~~~~~~~~ 139 (239)
+.++.++++++++..+. .+.+..+++.+++.+ ++|. ..+. .. -+.+ +||..|++.|++....+.++
T Consensus 88 ~~~~~~davvig~Gl~~--~~~~~~l~~~~~~~~~pvVlDa~g~~l~~~~~~~~~~~~vItPN~~El~~L~g~~~~~~~~ 165 (272)
T TIGR00196 88 ELLERYDVVVIGPGLGQ--DPSFKKAVEEVLELDKPVVLDADALNLLTYDKPKREGEVILTPHPGEFKRLLGLVNEIQGD 165 (272)
T ss_pred hhhccCCEEEEcCCCCC--CHHHHHHHHHHHhcCCCEEEEhHHHHHHhhcccccCCCEEECCCHHHHHHHhCCchhhhhh
Confidence 55678899999764332 233677888888777 6777 3332 21 1223 99999999999864434456
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHH
Q psy6977 140 LHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCI 219 (239)
Q Consensus 140 ~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~ 219 (239)
..++++++.+. .+.+|++.|.+++++..++..+.. ..+. ...+++|+||++.|.+...+.+|.++.+|+
T Consensus 166 ~~~aa~~l~~~-------~~~vVv~kG~~~~i~~~~~~~~~~-~~~~---~~~~~~GaGD~lag~iaa~la~g~~~~~A~ 234 (272)
T TIGR00196 166 RLEAAQDIAQK-------LQAVVVLKGAADVIAAPDGDLWIN-KTGN---AALAKGGTGDVLAGLIGGLLAQNLDPFDAA 234 (272)
T ss_pred HHHHHHHHHHH-------hCCEEEEcCCCCEEEcCCCeEEEE-CCCC---CccCCCCchHHHHHHHHHHHhCCCCHHHHH
Confidence 77777777774 346888899999877644555543 4444 678899999995555555566899999999
Q ss_pred HHH---HHHHHHHHHh
Q psy6977 220 ECG---VWAAQHIIQV 232 (239)
Q Consensus 220 ~~a---~~~a~~~~~~ 232 (239)
..| ...|+..+..
T Consensus 235 ~~a~~~~~~a~~~~~~ 250 (272)
T TIGR00196 235 CNAAFAHGLAGDLALK 250 (272)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 777 6666665533
No 70
>PRK14713 multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Provisional
Probab=99.26 E-value=4.1e-11 Score=105.18 Aligned_cols=108 Identities=16% Similarity=0.151 Sum_probs=81.5
Q ss_pred HHhhHH---hcCHHHHHHHHHHcC-CCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCC------cEEEEECCeEEEEec
Q psy6977 114 HRFIYL---VLIDFEALAFAKQQN-FQTEDLHAIALKISNLPKQNPNRERITIITQGDK------PIILSQNGKTTEFPV 183 (239)
Q Consensus 114 ~~~~~~---~~n~~E~~~l~~~~~-~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~------G~~~~~~~~~~~~~~ 183 (239)
++++++ +||..|++.|+|... .+.++..++++.+.+. +.+.||||.|.. ++++..+++.++++.
T Consensus 153 ~Ll~~advItPN~~Ea~~Ltg~~~~~~~~d~~~aa~~L~~~------~g~~VvItgG~~~~~~~~d~~~~~~~~~~~~~~ 226 (530)
T PRK14713 153 ELVPRADLITPNLPELAVLLGEPPATTWEEALAQARRLAAE------TGTTVLVKGGHLDGQRAPDALVGPDGAVTEVPG 226 (530)
T ss_pred HHhhhhheecCChHHHHHHhCCCCCCCHHHHHHHHHHHHHh------cCCEEEEeCCCCCCCcceEEEEcCCCeEEEEee
Confidence 566665 999999999998532 1334556667777654 346899998863 234433444677887
Q ss_pred cCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Q psy6977 184 QRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHII 230 (239)
Q Consensus 184 ~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~ 230 (239)
+++ +.+|++|+||+|.|+|++++++|.++++|+++|...-...+
T Consensus 227 ~~v---~~~~t~GaGD~fsaalaa~La~G~~l~eAv~~A~~~v~~~i 270 (530)
T PRK14713 227 PRV---DTRNTHGTGCSLSSALATRLGRGGDWAAALRWATAWLHGAI 270 (530)
T ss_pred eee---CCCCCCcHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 877 78999999999999999999999999999999988444444
No 71
>PLN02978 pyridoxal kinase
Probab=99.23 E-value=3.3e-10 Score=92.95 Aligned_cols=145 Identities=16% Similarity=0.136 Sum_probs=96.8
Q ss_pred eeEEEEeccccc-cChHHHHHHHHHhhhCC-----CCCh---h------------hH-HHHhhHH---hcCHHHHHHHHH
Q psy6977 77 AEYYYVSGFFLT-VSPESILEVAKVALSCT-----IRNI---N------------YL-HHRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 77 ~~~~~~~g~~~~-~~~~~~~~~~~~~~~~g-----~~~~---p------------~~-~~~~~~~---~~n~~E~~~l~~ 131 (239)
.+.+.+ |+... -..+.+.++++.++..+ ++|+ + .+ .++++++ +||..|+..|+|
T Consensus 87 ~~ai~~-G~l~s~~~~~~v~~~l~~~~~~~~~~~vvlDPvm~d~G~l~~~~~~~~~~~~~ll~~adiitPN~~Ea~~L~g 165 (308)
T PLN02978 87 YTHLLT-GYIGSVSFLRTVLRVVKKLRSVNPNLTYVCDPVLGDEGKLYVPPELVPVYREKVVPLATMLTPNQFEAEQLTG 165 (308)
T ss_pred cCEEEe-cccCCHHHHHHHHHHHHHHHHhCCCCeEEECCcccCCCCccCChhHHHHHHHHHHhhCCeeccCHHHHHHHhC
Confidence 566655 55433 22356777777776532 3344 1 01 1366665 999999999998
Q ss_pred HcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCC-CcEEE-EE--------CCeEEEEeccCCCCCCcccCCCCchhh
Q psy6977 132 QQNFQTEDLHAIALKISNLPKQNPNRERITIITQGD-KPIIL-SQ--------NGKTTEFPVQRLPAESVVDTNGAGDSF 201 (239)
Q Consensus 132 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~-~G~~~-~~--------~~~~~~~~~~~~~~~~vvdt~GaGDaf 201 (239)
....+.++..++++.+.++ |++.||||-+. +|.++ .. .++.+++..+++ +.. +.|+||+|
T Consensus 166 ~~~~~~~~~~~a~~~l~~~------g~~~VVITs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~~-~~GtGD~f 235 (308)
T PLN02978 166 IRIVTEEDAREACAILHAA------GPSKVVITSIDIDGKLLLVGSHRKEKGARPEQFKIVIPKI---PAY-FTGTGDLM 235 (308)
T ss_pred CCCCCHHHHHHHHHHHHHh------CCCEEEEEEecCCCCEEEEEecccccCCCCceEEEEccCC---CCC-CCCchHHH
Confidence 6333334566777778774 88999997644 34332 21 134567777776 444 48999999
Q ss_pred hHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHh
Q psy6977 202 VGGFLSQLIKG-EPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 202 ~ag~~~~l~~g-~~~~~a~~~a~~~a~~~~~~ 232 (239)
+|.+++.+.+| .++++|++.|...-...+..
T Consensus 236 sA~laa~l~~g~~~l~~A~~~A~~~v~~~i~~ 267 (308)
T PLN02978 236 AALLLGWSHKYPDNLDKAAELAVSSLQAVLRR 267 (308)
T ss_pred HHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHH
Confidence 99888888887 79999999998877666554
No 72
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=99.14 E-value=1.1e-09 Score=86.39 Aligned_cols=148 Identities=15% Similarity=0.146 Sum_probs=107.5
Q ss_pred hcccceeEEEEecccccc-ChHHHHHHHHHhhhCC-----CCCh---------------hhHH-HHhhHH---hcCHHHH
Q psy6977 72 KLIQNAEYYYVSGFFLTV-SPESILEVAKVALSCT-----IRNI---------------NYLH-HRFIYL---VLIDFEA 126 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~g-----~~~~---------------p~~~-~~~~~~---~~n~~E~ 126 (239)
..+.++|.++ +||.... .-..+..+++..|+.+ .+|+ +.+. +++|.+ .||..|+
T Consensus 69 ~~~~~~davl-tGYlgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~gglYV~~~~~~~~~~~lip~AdiiTPN~fEL 147 (281)
T COG2240 69 DKLGECDAVL-TGYLGSAEQVRAIAGIVKAVKEANPNALYLCDPVMGDPGGLYVAPEVAEAYRDELLPLADIITPNIFEL 147 (281)
T ss_pred ccccccCEEE-EccCCCHHHHHHHHHHHHHHhccCCCeEEEeCCcccCCCceeeccchHHHHHHhhcchhhEeCCCHHHH
Confidence 3667888887 4887652 2356777777777664 3333 1122 677777 9999999
Q ss_pred HHHHHHcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCC-----CcEEEEECC---eEEEEeccCCCCCCcccCCCCc
Q psy6977 127 LAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGD-----KPIILSQNG---KTTEFPVQRLPAESVVDTNGAG 198 (239)
Q Consensus 127 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~-----~G~~~~~~~---~~~~~~~~~~~~~~vvdt~GaG 198 (239)
+.|+|..-.+.++..++++.+.+. |++.|+||.=. .|.+++... ..+|.. |.+ ..+++|.|
T Consensus 148 e~Ltg~~~~~~~da~~aa~~L~~~------gp~~vlVTS~~~~~~~~~~~~~~~~~~~~~~h~~-~~v----~~~~~GtG 216 (281)
T COG2240 148 EILTGKPLNTLDDAVKAARKLGAD------GPKIVLVTSLSRAGMSTGNFEMLGKSAELAWHIS-PLV----PFIPNGTG 216 (281)
T ss_pred HHHhCCCCCCHHHHHHHHHHHhhc------CCCEEEEecccccCCCCceEEEeccchhhhhhhh-hcC----CCCCCCch
Confidence 999998766677788888888874 99999999533 344554432 344444 454 22389999
Q ss_pred hhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Q psy6977 199 DSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQ 231 (239)
Q Consensus 199 Daf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~ 231 (239)
|.|+|-|++.+++|.++.+++..++.+-...++
T Consensus 217 DL~sallla~lL~g~~~~~al~~~~~~V~evl~ 249 (281)
T COG2240 217 DLFSALLLARLLEGLSLTQALERATAAVYEVLQ 249 (281)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999888777665
No 73
>cd01170 THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz. A reaction that allows cells to recycle Thz into the thiamine biosynthesis pathway, as an alternative to its synthesis from cysteine, tyrosine and 1-deoxy-D-xylulose-5-phosphate.
Probab=99.13 E-value=1.8e-09 Score=85.50 Aligned_cols=150 Identities=13% Similarity=0.055 Sum_probs=100.6
Q ss_pred hhhcccceeEEEEecccc-ccChHHHHHHHHHhhhCC---CCCh------hh----HHHHhhH--H---hcCHHHHHHHH
Q psy6977 70 NNKLIQNAEYYYVSGFFL-TVSPESILEVAKVALSCT---IRNI------NY----LHHRFIY--L---VLIDFEALAFA 130 (239)
Q Consensus 70 ~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~g---~~~~------p~----~~~~~~~--~---~~n~~E~~~l~ 130 (239)
..+.++++|++++.--.+ +.+.+.+...++.+++.+ ++|+ +. ..++++. + +||..|+..|+
T Consensus 43 ~~~~l~~~d~vvi~~G~l~~~~~~~i~~~~~~~~~~~~pvVlDp~~~~~~~~~~~~~~~ll~~~~~~ilTPN~~Ea~~L~ 122 (242)
T cd01170 43 VEELAKIAGALVINIGTLTSEQIEAMLKAGKAANQLGKPVVLDPVGVGATSFRTEVAKELLAEGQPTVIRGNASEIAALA 122 (242)
T ss_pred HHHHHHHcCcEEEeCCCCChHHHHHHHHHHHHHHhcCCCEEEcccccCcchhHHHHHHHHHhcCCCeEEcCCHHHHHHHh
Confidence 346788999999942111 112244555555677666 5554 11 1244444 3 99999999999
Q ss_pred HHcCCC---------ccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhh
Q psy6977 131 KQQNFQ---------TEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSF 201 (239)
Q Consensus 131 ~~~~~~---------~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf 201 (239)
+..... .++..+.++.+.++ +...|++| |.... ++++++.++++..+. .+.+..|+||+|
T Consensus 123 g~~~~~~~~~~~~~~~~~~~~aa~~l~~~------~~~~Vllk-G~~d~-l~~~~~~~~~~~~~~---~~~~v~GtGdtL 191 (242)
T cd01170 123 GLTGLGKGVDSSSSDEEDALELAKALARK------YGAVVVVT-GEVDY-ITDGERVVVVKNGHP---LLTKITGTGCLL 191 (242)
T ss_pred CCCCCcCcccCCCcchHHHHHHHHHHHHH------hCCEEEEE-CCCcE-EEECCEEEEEeCCCc---cccCCCchHHHH
Confidence 864211 34567777777765 33468888 66665 456677777775443 445568999999
Q ss_pred hHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Q psy6977 202 VGGFLSQLIKGEPLSVCIECGVWAAQHII 230 (239)
Q Consensus 202 ~ag~~~~l~~g~~~~~a~~~a~~~a~~~~ 230 (239)
.|++...+.+|.++.+|+..|...-+...
T Consensus 192 a~aiAa~LA~g~~~~~A~~~A~~~~~~a~ 220 (242)
T cd01170 192 GAVIAAFLAVGDDPLEAAVSAVLVYGIAG 220 (242)
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999998866544443
No 74
>PTZ00493 phosphomethylpyrimidine kinase; Provisional
Probab=98.87 E-value=2.4e-08 Score=81.50 Aligned_cols=111 Identities=9% Similarity=0.024 Sum_probs=81.0
Q ss_pred HHhhHH---hcCHHHHHHHHHH----cCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCc----------E--EEEE
Q psy6977 114 HRFIYL---VLIDFEALAFAKQ----QNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKP----------I--ILSQ 174 (239)
Q Consensus 114 ~~~~~~---~~n~~E~~~l~~~----~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G----------~--~~~~ 174 (239)
.++|++ .||..|++.|.+. ...+.+++.++++.+.+. .|++.|+||-|... + +++.
T Consensus 135 ~Llp~a~viTPN~~Ea~~L~g~~~~~~~~~~~~~~~aA~~l~~~-----~G~~~VliKGGh~~~~~~~~~~~~~~D~l~~ 209 (321)
T PTZ00493 135 LICPISCIITPNFYECKVILEALDCQMDLSKANMTELCKLVTEK-----LNINACLFKSCNVGENSAEENEVYAVDHLCI 209 (321)
T ss_pred HhhccCEEECCCHHHHHHHhCCCcccCCCCHHHHHHHHHHHHHh-----cCCCEEEECcCCCcccccccccccceeEEec
Confidence 466766 8999999999871 112345677888888763 28999999977521 1 2322
Q ss_pred -------C--------C------eEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 175 -------N--------G------KTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 175 -------~--------~------~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
. + +.+++..+.+ ...++.|+||+|.+++++.|++|.++++|++.|...-..++..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri---~~~~~hGTGc~fASAIAa~LA~G~~l~~Av~~A~~fv~~aI~~ 285 (321)
T PTZ00493 210 RNVGSYPTGEKQQIDAGGVTYLYDVYKLRSKRK---PGKDIHGTGCTLSTAIACYLAKKHNILQSCIESKKYIYNCIRY 285 (321)
T ss_pred CCccccccccccccccccccccceEEEEEeccc---CCCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 1 1 1345666665 4567789999999999999999999999999998776666654
No 75
>KOG2599|consensus
Probab=98.66 E-value=3.8e-07 Score=71.03 Aligned_cols=140 Identities=19% Similarity=0.188 Sum_probs=94.3
Q ss_pred ceeEEEEeccccccCh-HHHHHHHHHhhhCC-----CCCh---------------hhHHHHhhH-H---hcCHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSP-ESILEVAKVALSCT-----IRNI---------------NYLHHRFIY-L---VLIDFEALAFA 130 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~g-----~~~~---------------p~~~~~~~~-~---~~n~~E~~~l~ 130 (239)
..+.++ +||.++.+. ..+.++++..|+.+ ++|+ |.+.++++. + .||..|++.|+
T Consensus 81 ~Y~~vL-TGY~~n~~~l~~i~~iv~~lk~~np~~~wv~DPVmGDnG~lYV~eelipvYr~~i~~ladiiTPNqFE~EiLt 159 (308)
T KOG2599|consen 81 KYDAVL-TGYLPNVSFLQKIADIVKKLKKKNPNLTWVCDPVMGDNGRLYVPEELIPVYRDLIIPLADIITPNQFEAEILT 159 (308)
T ss_pred ccceee-eeccCChhHHHHHHHHHHHHHhcCCCeEEEeCccccCCccEeccHHHHHHHHHhhcchhhhcCCcchhhhhhc
Confidence 566654 588877543 56666777666655 3333 223344433 3 89999999999
Q ss_pred HHcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCC----c-EEE---EE-CCeEEEEeccCCCCCCcccCCCCchhh
Q psy6977 131 KQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDK----P-IIL---SQ-NGKTTEFPVQRLPAESVVDTNGAGDSF 201 (239)
Q Consensus 131 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~----G-~~~---~~-~~~~~~~~~~~~~~~~vvdt~GaGDaf 201 (239)
|..-.+.++..++.++++++ |++.||||...- | .++ .. +.+.+.+..|.+ ..+ -+|.||-|
T Consensus 160 g~~I~t~eda~~a~~~lhq~------~v~~vVITS~~~~~~~g~~l~c~gs~~~~~~f~~~ipki---~~~-FtGTGDLf 229 (308)
T KOG2599|consen 160 GMEIRTEEDAKRAVEKLHQK------GVKTVVITSFDLGEFTGETLRCIGSSCGSERFRYLIPKI---DGV-FTGTGDLF 229 (308)
T ss_pred CCeeccHHHHHHHHHHHHHh------CCCEEEEEeeeeCCCCCcEEEEEEeccCCceEEEEeccc---ceE-EecccHHH
Confidence 98777788888999999995 899999996543 3 111 22 234666666665 233 36999999
Q ss_pred hHHHHHHHHcC---CCHHHHHHHHHHHH
Q psy6977 202 VGGFLSQLIKG---EPLSVCIECGVWAA 226 (239)
Q Consensus 202 ~ag~~~~l~~g---~~~~~a~~~a~~~a 226 (239)
+|-+++.+... .++..++..+...-
T Consensus 230 saLLla~~~~~~~~~~l~~a~e~~ls~~ 257 (308)
T KOG2599|consen 230 SALLLAWLHESPDNDDLSKAVEQVLSSV 257 (308)
T ss_pred HHHHHHHHhcCCCcchHHHHHHHHHHHH
Confidence 99888887654 56777766655443
No 76
>PRK09355 hydroxyethylthiazole kinase; Validated
Probab=98.51 E-value=5.9e-06 Score=66.37 Aligned_cols=147 Identities=12% Similarity=0.069 Sum_probs=92.6
Q ss_pred hhhcccceeEEEEeccccccChHH---HHHHHHHhhhCC---CCCh------hhHH----HHhh--H--H-hcCHHHHHH
Q psy6977 70 NNKLIQNAEYYYVSGFFLTVSPES---ILEVAKVALSCT---IRNI------NYLH----HRFI--Y--L-VLIDFEALA 128 (239)
Q Consensus 70 ~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~g---~~~~------p~~~----~~~~--~--~-~~n~~E~~~ 128 (239)
..+.+..++.+++. .. ....+. +..+++.+++.+ ++|+ +... ++++ . + +||..|+..
T Consensus 48 ~~~~~~~~~alvi~-~G-~l~~~~~~~i~~~~~~a~~~~~pvVlDpv~~~~~~~~~~~~~~ll~~~~~~vItPN~~E~~~ 125 (263)
T PRK09355 48 AEEMAKIAGALVIN-IG-TLTEERIEAMLAAGKIANEAGKPVVLDPVGVGATSYRTEFALELLAEVKPAVIRGNASEIAA 125 (263)
T ss_pred HHHHHHhcCceEEe-CC-CCCHHHHHHHHHHHHHHHhcCCCEEECCcccCcchhhHHHHHHHHHhcCCcEecCCHHHHHH
Confidence 33667788888884 11 123332 444555566666 6665 1111 3443 1 2 999999999
Q ss_pred HHHHcCC--------CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchh
Q psy6977 129 FAKQQNF--------QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDS 200 (239)
Q Consensus 129 l~~~~~~--------~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDa 200 (239)
|++.... +.++..+.++.+.++ +...|++| |... ++++++..+.++.... ...+.+|+||+
T Consensus 126 L~g~~~~~~~vd~~~~~~~~~~~a~~la~~------~~~~Vvvk-G~~d-~I~~~~~~~~~~~g~~---~~~~v~GtGc~ 194 (263)
T PRK09355 126 LAGEAAETKGVDSTDGSADAVEIAKAAAKK------YGTVVVVT-GEVD-YITDGERVVSVHNGHP---LMTKVTGTGCL 194 (263)
T ss_pred HhCCCcccCCcCCCCCHHHHHHHHHHHHHH------hCCEEEEE-CCCc-EEEeCCEEEEEeCCCc---ccCCcccccHH
Confidence 9985311 122566677777775 33467887 4444 3335555555552221 45555899999
Q ss_pred hhHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy6977 201 FVGGFLSQLIKGEPLSVCIECGVWAAQHI 229 (239)
Q Consensus 201 f~ag~~~~l~~g~~~~~a~~~a~~~a~~~ 229 (239)
+.|.+...+..|.++.+|+..|...-..+
T Consensus 195 L~~~iaa~lA~g~~~~~A~~~A~~~~~~a 223 (263)
T PRK09355 195 LSAVVAAFAAVEKDYLEAAAAACAVYGIA 223 (263)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999988777644433
No 77
>KOG3009|consensus
Probab=98.46 E-value=3.2e-06 Score=70.63 Aligned_cols=147 Identities=18% Similarity=0.201 Sum_probs=95.6
Q ss_pred cceeEEEEeccccccChHHHHHHHHHhhhCC---CCCh---hhHHHHhhH--------HhcCHHHHHHHHHHc--CCC--
Q psy6977 75 QNAEYYYVSGFFLTVSPESILEVAKVALSCT---IRNI---NYLHHRFIY--------LVLIDFEALAFAKQQ--NFQ-- 136 (239)
Q Consensus 75 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~---p~~~~~~~~--------~~~n~~E~~~l~~~~--~~~-- 136 (239)
..++++.++ .++++..+.++++ ++.+. .+++ +...+.++. +.||..|+....... .++
T Consensus 424 ~~a~~I~~D---sNiS~~~Ma~il~-ak~~k~~V~fEPTd~~k~~K~fk~l~v~~i~~i~PN~~Ell~a~k~~~v~~nps 499 (614)
T KOG3009|consen 424 LSADFILLD---SNISVPVMARILE-AKKHKKQVWFEPTDIDKVKKVFKTLLVGAITAISPNANELLKAAKLCHVSVNPS 499 (614)
T ss_pred hcCCEEEEc---CCCCHHHHHHHHH-hhhccCceEecCCCchhhhhhhhhcceeeEEeeCCCHHHHHHHhhcCceeeChh
Confidence 389999995 4688888888888 66655 3444 222222222 289999984222211 111
Q ss_pred ----ccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCe-----EEEEeccCCCCCCcccCCCCchhhhHHHHH
Q psy6977 137 ----TEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGK-----TTEFPVQRLPAESVVDTNGAGDSFVGGFLS 207 (239)
Q Consensus 137 ----~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~-----~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~ 207 (239)
.+...+.++....+.. .....+|+|.-.+|++....++ ....+++.. ..++++..||||+|.+||+.
T Consensus 500 ~~q~~~~~~~~~~~~~~k~~---~~~s~~I~tl~~~G~l~~yr~k~g~l~~~s~~p~~~-~~n~vsvsgaGdsf~~g~i~ 575 (614)
T KOG3009|consen 500 VIQTADGVLELIEKEKTKLL---LNTSIFIVTLANKGSLVVYRNKLGQLEFQSLPPPLQ-MNNVVSVSGAGDSFNSGVIA 575 (614)
T ss_pred hhccchHHHHHHHHHHHHhh---cccceEEEEeccCceEEEecCCCCCcccccCCCccc-ccceeEeccCCcccccceee
Confidence 1223344444433332 2456789999999988765542 333343332 35899999999999999999
Q ss_pred HHHcCCCHHHHHHHHHHHHHHH
Q psy6977 208 QLIKGEPLSVCIECGVWAAQHI 229 (239)
Q Consensus 208 ~l~~g~~~~~a~~~a~~~a~~~ 229 (239)
+++++.++.+++.-+..++...
T Consensus 576 ~l~~~~~v~es~~gg~~~~ral 597 (614)
T KOG3009|consen 576 GLAHNKTVVESLQGGQECARAL 597 (614)
T ss_pred hhhcCcchHhhccccHHHHHHH
Confidence 9999999999999885555443
No 78
>TIGR00694 thiM hydroxyethylthiazole kinase. This model represents the hydoxyethylthiazole kinase, ThiM, of a number of bacteria, and C-terminal domains of bifunctional thiamine biosynthesis proteins of Saccharomyces cerevisiae and Schizosaccharomyces pombe, in which the N-terminal domain corresponds to the bacterial thiamine-phosphate pyrophosphorylase (EC 2.5.1.3), ThiE.
Probab=98.28 E-value=2.8e-05 Score=61.98 Aligned_cols=143 Identities=11% Similarity=-0.036 Sum_probs=89.5
Q ss_pred hhhcccceeEEEEeccccccCh---HHHHHHHHHhhhCC---CCCh-----h--hH---HHHhhH----H-hcCHHHHHH
Q psy6977 70 NNKLIQNAEYYYVSGFFLTVSP---ESILEVAKVALSCT---IRNI-----N--YL---HHRFIY----L-VLIDFEALA 128 (239)
Q Consensus 70 ~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~g---~~~~-----p--~~---~~~~~~----~-~~n~~E~~~ 128 (239)
..+.++.++.+++.--. ... +.+..+++.+++.+ ++|+ . .+ .++++. + .||..|++.
T Consensus 43 ~~~~~~~~~al~ik~G~--l~~~~~~~i~~~~~~~~~~~~pvVlDPV~~~~s~~r~~~~~~Ll~~~~~~vITpN~~E~~~ 120 (249)
T TIGR00694 43 VAELAKIAGALVINIGT--LDKESIEAMIAAGKSANELGVPVVLDPVGVGATKFRTETALELLSEGRFAAIRGNAGEIAS 120 (249)
T ss_pred HHHHHHHcCceEEeCCC--CCHHHHHHHHHHHHHHHhcCCCEEEcccccccchhHHHHHHHHHhhcCCceeCCCHHHHHH
Confidence 34667788888884111 222 34455566666555 6666 1 11 245652 2 999999999
Q ss_pred HHHHcC----C----CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchh
Q psy6977 129 FAKQQN----F----QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDS 200 (239)
Q Consensus 129 l~~~~~----~----~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDa 200 (239)
|++... . +.++..+.++.+.++. ++ .|++| |.... ++++++.+.+..... .....+|.||+
T Consensus 121 L~g~~~~~~gvd~~~~~~d~~~~a~~la~~~-----~~-~Vllk-G~~D~-i~~~~~~~~~~~g~~---~~~~~~GtGc~ 189 (249)
T TIGR00694 121 LAGETGLMKGVDSGEGAADAIRAAQQAAQKY-----GT-VVVIT-GEVDY-VSDGTSVYTIHNGTE---LLGKITGSGCL 189 (249)
T ss_pred HhCCCCCCCCcCCccchHHHHHHHHHHHHHh-----CC-EEEEE-CCCcE-EEeCCEEEEECCCCh---HHhCCccchHH
Confidence 998531 0 1235666777777752 33 67775 54444 445665555433221 12224799999
Q ss_pred hhHHHHHHHHcCCCHHHHHHHHHHH
Q psy6977 201 FVGGFLSQLIKGEPLSVCIECGVWA 225 (239)
Q Consensus 201 f~ag~~~~l~~g~~~~~a~~~a~~~ 225 (239)
+.+.+...+..|.++.+|+..|...
T Consensus 190 LssaIaa~LA~g~~~~~A~~~A~~~ 214 (249)
T TIGR00694 190 LGSVVAAFCAVEEDPLDAAISACLL 214 (249)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 9999999999999999999888643
No 79
>KOG2598|consensus
Probab=98.25 E-value=6.6e-05 Score=62.56 Aligned_cols=108 Identities=20% Similarity=0.239 Sum_probs=84.3
Q ss_pred HHhhHH---hcCHHHHHHHHHHcC------CCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcE--------------
Q psy6977 114 HRFIYL---VLIDFEALAFAKQQN------FQTEDLHAIALKISNLPKQNPNRERITIITQGDKPI-------------- 170 (239)
Q Consensus 114 ~~~~~~---~~n~~E~~~l~~~~~------~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~-------------- 170 (239)
+++|++ .||..|+-.|.+... .+..++...+..++++ |+|+|+++.|.-..
T Consensus 148 ~l~P~adiltPNI~Ea~~Ll~~~~~~~~~i~~v~di~~~~~~ihk~------gpk~VlvkGghiP~~~~~~~s~d~~~~~ 221 (523)
T KOG2598|consen 148 ELLPFADILTPNIPEAFILLKKEKREISKIQSVFDIAKDAAKIHKL------GPKNVLVKGGHIPFNKNMMTSKDDSDKY 221 (523)
T ss_pred HhhhhHHHhCCChHHHHHHHhhcccCCcccccHHHHHHHHHHHHhc------CcceEEEeCCCcCccccccccCcccCCc
Confidence 778877 899999999988421 1335566677777875 99999998774221
Q ss_pred ---EEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Q psy6977 171 ---ILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHII 230 (239)
Q Consensus 171 ---~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~ 230 (239)
+++.++++++++.+-+ ....+-|.|-++.++++.-|+.|.++.+|+..|..---.++
T Consensus 222 ~~DvlydG~~F~~f~~~~~---~t~~tHGtgCtLaSAIASnLA~g~sl~qAv~~ai~yvq~Ai 281 (523)
T KOG2598|consen 222 TVDVLYDGKEFYIFKSPYL---ATKHTHGTGCTLASAIASNLARGYSLLQAVQGAIEYVQNAI 281 (523)
T ss_pred eEEEEEecceEEEeccccc---ccccccCccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Confidence 3556778888888887 78888999999999999999999999999988876444333
No 80
>PF01256 Carb_kinase: Carbohydrate kinase; InterPro: IPR000631 This family is related to Hydroxyethylthiazole kinase IPR000417 from INTERPRO and PfkB carbohydrate kinase IPR011611 from INTERPRO implying that it also a carbohydrate kinase. Several uncharacterised proteins have been shown to share regions of similarities, including yeast chromosome XI hypothetical protein YKL151c; Caenorhabditis elegans hypothetical protein R107.2; Escherichia coli hypothetical protein yjeF; Bacillus subtilis hypothetical protein yxkO; Helicobacter pylori hypothetical protein HP1363; Mycobacterium tuberculosis hypothetical protein MtCY77.05c; Mycobacterium leprae hypothetical protein B229_C2_201; Synechocystis sp. (strain PCC 6803) hypothetical protein sll1433; and Methanocaldococcus jannaschii (Methanococcus jannaschii) hypothetical protein MJ1586. These are proteins of about 30 to 40 kDa whose central region is well conserved.; PDB: 3RSG_A 3RT9_A 3RRF_A 3RTB_A 3RRE_A 3RS9_A 3RSS_A 3RRB_A 3RTA_A 3RTD_A ....
Probab=97.30 E-value=0.0045 Score=49.07 Aligned_cols=142 Identities=18% Similarity=0.128 Sum_probs=89.2
Q ss_pred hhcccceeEEEEeccccccChHHHHHHHHHhhhCC---CCChhhHH---HH----hhH-H-hcCHHHHHHHHHHcCCCcc
Q psy6977 71 NKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCT---IRNINYLH---HR----FIY-L-VLIDFEALAFAKQQNFQTE 138 (239)
Q Consensus 71 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~p~~~---~~----~~~-~-~~n~~E~~~l~~~~~~~~~ 138 (239)
.+.+++++.+++. .-+....+. ..+++...+.. ++|...++ +. -.. + .|+.-|+..|++......+
T Consensus 62 ~~~~~~~~av~iG-PGlg~~~~~-~~~~~~~~~~~~p~VlDADaL~~l~~~~~~~~~~~IlTPH~gE~~rL~~~~~~~~~ 139 (242)
T PF01256_consen 62 LELLEKADAVVIG-PGLGRDEET-EELLEELLESDKPLVLDADALNLLAENPKKRNAPVILTPHPGEFARLLGKSVEIQE 139 (242)
T ss_dssp HHHHCH-SEEEE--TT-SSSHHH-HHHHHHHHHHCSTEEEECHHHHCHHHCCCCSSSCEEEE-BHHHHHHHHTTTCHHCC
T ss_pred HhhhccCCEEEee-cCCCCchhh-HHHHHHHHhhcceEEEehHHHHHHHhccccCCCCEEECCCHHHHHHHhCCcccchh
Confidence 3567899999994 233333332 23343333333 66663332 21 111 1 8999999999987433346
Q ss_pred CHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHH
Q psy6977 139 DLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVC 218 (239)
Q Consensus 139 ~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a 218 (239)
+..+.++.+.+.. +.+|+-.|..-.++..+++.+..+... .-.-+-|.||.++|-+..-+.++.++.+|
T Consensus 140 ~~~~~a~~~a~~~-------~~~vvLKG~~t~I~~p~~~~~~n~~gn----~~la~gGsGDvLaGii~~llaq~~~~~~A 208 (242)
T PF01256_consen 140 DRIEAAREFAKEY-------GAVVVLKGAVTIIASPGGRVYVNPTGN----PGLATGGSGDVLAGIIAGLLAQGYDPFEA 208 (242)
T ss_dssp SHHHHHHHHHHHH-------TSEEEEESTSSEEEEETSEEEEE--------GGGSSTTHHHHHHHHHHHHHHHTSSHHHH
T ss_pred hHHHHHHHHHhhc-------CcEEEEeCCCcEEEecCcceeEeCCCC----CCCCCCCcccHHHHHHHHHHHccCCHHHH
Confidence 6777888777752 346666788887776677766655443 45566799999998888888999999999
Q ss_pred HHHHHHH
Q psy6977 219 IECGVWA 225 (239)
Q Consensus 219 ~~~a~~~ 225 (239)
...|+..
T Consensus 209 a~~av~l 215 (242)
T PF01256_consen 209 ACLAVYL 215 (242)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9888764
No 81
>PRK10565 putative carbohydrate kinase; Provisional
Probab=96.81 E-value=0.026 Score=49.79 Aligned_cols=140 Identities=12% Similarity=0.002 Sum_probs=81.0
Q ss_pred hcccceeEEEEeccccccChHHHHHHHHHhhhCC---CCChhhH---HHHh----hHH-hcCHHHHHHHHHHcCCCc-cC
Q psy6977 72 KLIQNAEYYYVSGFFLTVSPESILEVAKVALSCT---IRNINYL---HHRF----IYL-VLIDFEALAFAKQQNFQT-ED 139 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~p~~---~~~~----~~~-~~n~~E~~~l~~~~~~~~-~~ 139 (239)
+.++.++.+++.. -...+ +....+++.+++.+ ++|...+ .+.. +.+ .||.-|++.|++...... .+
T Consensus 316 ~~~~~~~a~viGp-Glg~~-~~~~~~~~~~~~~~~P~VLDAdaL~ll~~~~~~~~~~VLTPh~gE~~rL~~~~~~~v~~~ 393 (508)
T PRK10565 316 ESLEWADVVVIGP-GLGQQ-EWGKKALQKVENFRKPMLWDADALNLLAINPDKRHNRVITPHPGEAARLLGCSVAEIESD 393 (508)
T ss_pred HHhhcCCEEEEeC-CCCCC-HHHHHHHHHHHhcCCCEEEEchHHHHHhhCccccCCeEECCCHHHHHHHhCCChhhhhhh
Confidence 4456788888842 22222 33345556665544 6666222 1110 123 999999999997421111 23
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHH
Q psy6977 140 LHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCI 219 (239)
Q Consensus 140 ~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~ 219 (239)
..+.++.+.++. + ..||+ -|..-.+.-.++..+..+. .- .-.-+.|.||.++|.+.+-+.++.++.+|.
T Consensus 394 ~~~~a~~~a~~~-----~-~~vvl-KG~~~iI~~~~~~~~~~~~-G~---~~ma~~GsGDvLaGiIaalla~g~~~~~Aa 462 (508)
T PRK10565 394 RLLSARRLVKRY-----G-GVVVL-KGAGTVIAAEPDALAIIDV-GN---AGMASGGMGDVLSGIIGALLGQKLSPYDAA 462 (508)
T ss_pred HHHHHHHHHHHh-----C-CEEEE-eCCCcEEEcCCceEEEECC-CC---CCCCCCChHHHHHHHHHHHHHcCCCHHHHH
Confidence 445566666642 2 24444 5665544422344444332 22 345569999999998888888898998888
Q ss_pred HHHHH
Q psy6977 220 ECGVW 224 (239)
Q Consensus 220 ~~a~~ 224 (239)
..|+.
T Consensus 463 ~~a~~ 467 (508)
T PRK10565 463 CAGCV 467 (508)
T ss_pred HHHHH
Confidence 77764
No 82
>COG2145 ThiM Hydroxyethylthiazole kinase, sugar kinase family [Coenzyme metabolism]
Probab=96.21 E-value=0.34 Score=38.41 Aligned_cols=139 Identities=12% Similarity=0.036 Sum_probs=84.9
Q ss_pred hcccceeEEEEeccccccCh---HHHHHHHHHhhhCC---CCCh------hhHH----HHhhHH-----hcCHHHHHHHH
Q psy6977 72 KLIQNAEYYYVSGFFLTVSP---ESILEVAKVALSCT---IRNI------NYLH----HRFIYL-----VLIDFEALAFA 130 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~g---~~~~------p~~~----~~~~~~-----~~n~~E~~~l~ 130 (239)
+..+-++.++++ ...++. +.+..+.+.+.+.| ++|+ ++.. +++.+. ..|..|...|.
T Consensus 51 e~~kia~AL~IN--IGTL~~~~~~~m~~A~~~An~~~~PvvLDPVgvgAt~~R~~~~~~LL~~~~~~~IrGN~sEI~~La 128 (265)
T COG2145 51 EFAKIADALLIN--IGTLSAERIQAMRAAIKAANESGKPVVLDPVGVGATKFRTKFALELLAEVKPAAIRGNASEIAALA 128 (265)
T ss_pred HHHHhccceEEe--eccCChHHHHHHHHHHHHHHhcCCCEEecCccCCchHHHHHHHHHHHHhcCCcEEeccHHHHHHHh
Confidence 566777777775 222333 55666777777777 7887 2222 666654 89999999999
Q ss_pred HHcC--------CCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhh
Q psy6977 131 KQQN--------FQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFV 202 (239)
Q Consensus 131 ~~~~--------~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ 202 (239)
|... ....++.++++.+.+.. +.+++-.|+..++. ++.+.+.+....- -.-.-||+|+...
T Consensus 129 g~~~~~kGVDa~~~~~~~~~~a~~~A~~~-------~~vvvvTG~vD~Is-dg~~~~~i~nG~p---ll~~ItGtGCllg 197 (265)
T COG2145 129 GEAGGGKGVDAGDGAADAIEAAKKAAQKY-------GTVVVVTGEVDYIS-DGTRVVVIHNGSP---LLGKITGTGCLLG 197 (265)
T ss_pred cccccccccccccchhhHHHHHHHHHHHh-------CcEEEEECCeeEEE-cCCeEEEEECCCc---HHhhhhccccHHH
Confidence 7531 12344566676666642 35666667777655 4444444443321 2334489999887
Q ss_pred HHHHHHHHcCCC-HHHHHHHHH
Q psy6977 203 GGFLSQLIKGEP-LSVCIECGV 223 (239)
Q Consensus 203 ag~~~~l~~g~~-~~~a~~~a~ 223 (239)
|.....+.-..+ ..+|...|+
T Consensus 198 av~aaF~av~~d~~~~A~~~A~ 219 (265)
T COG2145 198 AVVAAFLAVEKDPLLDAAAEAC 219 (265)
T ss_pred HHHHHHHhcCCCHHHHHHHHHH
Confidence 777666666666 455555443
No 83
>PF02110 HK: Hydroxyethylthiazole kinase family; InterPro: IPR000417 Thiamine pyrophosphate (TPP), a required cofactor for many enzymes in the cell, is synthesised de novo in Salmonella typhimurium []. Five kinase activities have been implicated in TPP synthesis, which involves joining a 4-methyl-5-(beta-hydroxyethyl)thiazole (THZ) moiety and a 4-amino-5- hydroxymethyl-2-methylpyrimidine (HMP) moiety [, ]. THZ kinase (2.7.1.50 from EC) activity is involved in the salvage synthesis of TH-P from the thiazole: 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate + 4-4-methyl-5-(2-phosphonooxyethyl)-thiazole = pyrophosphate + thiamin monophosphate Hydroxyethylthiazole kinase expression is regulated at the mRNA level by intracellular thiamin pyrophosphate [].; GO: 0004417 hydroxyethylthiazole kinase activity, 0009228 thiamine biosynthetic process; PDB: 1EKK_A 1ESQ_C 1C3Q_B 1ESJ_A 1EKQ_B 3HPD_A 3DZV_A 3NL5_A 3NL2_A 3NM1_A ....
Probab=96.06 E-value=0.24 Score=39.23 Aligned_cols=139 Identities=14% Similarity=0.095 Sum_probs=86.4
Q ss_pred hcccceeEEEEeccccccCh---HHHHHHHHHhhhCC---CCCh------hhHH----HHhhHH-----hcCHHHHHHHH
Q psy6977 72 KLIQNAEYYYVSGFFLTVSP---ESILEVAKVALSCT---IRNI------NYLH----HRFIYL-----VLIDFEALAFA 130 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~g---~~~~------p~~~----~~~~~~-----~~n~~E~~~l~ 130 (239)
+..+.++.++++ ...+++ +.+..+.+.+.+.+ ++|+ ++.. +++... +.|..|...|.
T Consensus 45 e~~~~a~al~iN--iGTl~~~~~~~m~~A~~~A~~~~~PvVLDPVgvGas~~R~~~~~~LL~~~~~~vIrGN~sEI~aLa 122 (246)
T PF02110_consen 45 EFASIADALVIN--IGTLTDERIEAMKKAAKAANELGIPVVLDPVGVGASKFRTEFALELLNNYKPTVIRGNASEIAALA 122 (246)
T ss_dssp HHHHCTSEEEEE--STTSSHHHHHHHHHHHHHHHHTT--EEEE-TTBTTBHHHHHHHHHHHCHS--SEEEEEHHHHHHHH
T ss_pred HHHHHcCEEEEE--CCCCCHhHHHHHHHHHHHHHHcCCCEEEeCcccCCcHHHHHHHHHHHHhCCCcEEEeCHHHHHHHh
Confidence 666778888885 223344 55667777777777 7787 2222 555332 89999999999
Q ss_pred HHcCC--------CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhh
Q psy6977 131 KQQNF--------QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFV 202 (239)
Q Consensus 131 ~~~~~--------~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ 202 (239)
+.... ...+..+.++.+.++. +.+|+-.|+...+. ++...+.++.-.- -.-.-||.|+...
T Consensus 123 g~~~~~kGVDs~~~~~~~~~~a~~lA~k~-------~~vVvvTG~~D~Is-dg~~~~~i~nG~~---~l~~itGtGC~lg 191 (246)
T PF02110_consen 123 GEDSKAKGVDSGDSDEDAIEAAKQLAQKY-------NCVVVVTGEVDYIS-DGNRVYRIPNGSP---LLSKITGTGCMLG 191 (246)
T ss_dssp TCCCCSCSSSSSCGSHHHHHHHHHHHHHT-------TSEEEEESSSEEEE-ESSCEEEECSSSG---GGGGSTTHHHHHH
T ss_pred CcCCCCCCcCcCCcchHHHHHHHHHHHhc-------CCEEEEecCCcEEE-CCCeEEEeCCCCh---HhcceeccchHHH
Confidence 86421 1122457778887753 34666668877764 5555555554432 3445599999877
Q ss_pred HHHHHHHHcCCCHHHHHHHHH
Q psy6977 203 GGFLSQLIKGEPLSVCIECGV 223 (239)
Q Consensus 203 ag~~~~l~~g~~~~~a~~~a~ 223 (239)
+-+.+.+.-..+..++...|.
T Consensus 192 aliaaf~av~~d~~~aa~~a~ 212 (246)
T PF02110_consen 192 ALIAAFLAVAEDPLEAAVAAV 212 (246)
T ss_dssp HHHHHHHCCCSSHHHHHHHHH
T ss_pred HHHHHHHhccccchHHHHHHH
Confidence 766666666566655554443
No 84
>PRK03979 ADP-specific phosphofructokinase; Provisional
Probab=95.22 E-value=0.48 Score=41.03 Aligned_cols=30 Identities=23% Similarity=0.388 Sum_probs=22.2
Q ss_pred EEeccCCCCCCcccCCCCchhhhHHHHHHHHc
Q psy6977 180 EFPVQRLPAESVVDTNGAGDSFVGGFLSQLIK 211 (239)
Q Consensus 180 ~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~ 211 (239)
.+|+.-+ ++.+.|+|-||+|+||...++..
T Consensus 426 ~iPt~~v--~~P~sTVGLGDtisagaF~~~~~ 455 (463)
T PRK03979 426 LIPSRLV--ENPKSTVGLGDTISAGAFVSYLS 455 (463)
T ss_pred Eeccccc--CCCcceeccCcccchhHHHHHHH
Confidence 3444444 47888999999999988777643
No 85
>KOG3974|consensus
Probab=94.63 E-value=1.3 Score=35.13 Aligned_cols=149 Identities=13% Similarity=0.121 Sum_probs=84.8
Q ss_pred hcccceeEEEEeccccccCh---HHHHHHHHHhhhCC---CCChhhHH------H-Hhh---HH--hcCHHHHHHHHHHc
Q psy6977 72 KLIQNAEYYYVSGFFLTVSP---ESILEVAKVALSCT---IRNINYLH------H-RFI---YL--VLIDFEALAFAKQQ 133 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~g---~~~~p~~~------~-~~~---~~--~~n~~E~~~l~~~~ 133 (239)
+++.+-+++++. ..+..++ ..+..++++++..+ ++|..-+| + ++. .+ .||.-|...|++..
T Consensus 97 k~L~RlhavVIG-PGLGRdp~~~k~i~~iley~~~~dvP~VIDaDGL~Lv~q~~e~l~~~~~~viLTPNvvEFkRLcd~~ 175 (306)
T KOG3974|consen 97 KLLQRLHAVVIG-PGLGRDPAILKEIAKILEYLRGKDVPLVIDADGLWLVEQLPERLIGGYPKVILTPNVVEFKRLCDAE 175 (306)
T ss_pred HHHhheeEEEEC-CCCCCCHHHHHHHHHHHHHHhcCCCcEEEcCCceEehhhchhhhhccCceeeeCCcHHHHHHHHHHh
Confidence 578888899984 3444454 45677788888776 45542222 1 221 12 89999999999974
Q ss_pred CCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHH----
Q psy6977 134 NFQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQL---- 209 (239)
Q Consensus 134 ~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l---- 209 (239)
..+.+...++ ..|.... ....|+-.|+...++..+++....+ .+- ...-.=|=||..++.+..-+
T Consensus 176 l~~~d~~~~~-~~L~~~l------~nv~vvqKG~~D~ils~~~ev~~~s-~eG---s~kRcGGQGDiLaGsla~fl~w~k 244 (306)
T KOG3974|consen 176 LDKVDSHSQM-QHLAAEL------MNVTVVQKGESDKILSPDSEVRVCS-TEG---SLKRCGGQGDILAGSLATFLSWAK 244 (306)
T ss_pred hccccchHHH-HHHHHHh------cCeEEEEecCCceeeCCCCeeEEcc-CCC---CccccCCCcchhhhHHHHHHHHHH
Confidence 3333333333 3333321 2467777888888665555544333 333 22223578999988664443
Q ss_pred HcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 210 IKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 210 ~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
+......++...|..+++..+..
T Consensus 245 ~~~~e~~~~~~~a~~a~s~~vr~ 267 (306)
T KOG3974|consen 245 LLSGEQDSAAFLAAVAGSIMVRR 267 (306)
T ss_pred hccCCccchhhhhhhhhHHHHHH
Confidence 22334445566665555555444
No 86
>PRK14039 ADP-dependent glucokinase; Provisional
Probab=92.26 E-value=5 Score=34.87 Aligned_cols=22 Identities=36% Similarity=0.585 Sum_probs=17.9
Q ss_pred CCcccCCCCchhhhHHHHHHHH
Q psy6977 189 ESVVDTNGAGDSFVGGFLSQLI 210 (239)
Q Consensus 189 ~~vvdt~GaGDaf~ag~~~~l~ 210 (239)
++.+.|+|-||+++||-..+++
T Consensus 426 ~~P~sTVGlGDtisa~af~~~l 447 (453)
T PRK14039 426 KSPVTTVGLGDTLTAGTFLRLL 447 (453)
T ss_pred cCCccccccCccccHHHHHHHH
Confidence 4788999999999987666654
No 87
>COG0063 Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=91.89 E-value=1.3 Score=35.99 Aligned_cols=127 Identities=17% Similarity=0.149 Sum_probs=69.2
Q ss_pred cccceeEEEEeccccccChH---HHHHHHHHhhhCC-CCChhh---HH---HHh---hHH-hcCHHHHHHHHHHcC-CCc
Q psy6977 73 LIQNAEYYYVSGFFLTVSPE---SILEVAKVALSCT-IRNINY---LH---HRF---IYL-VLIDFEALAFAKQQN-FQT 137 (239)
Q Consensus 73 ~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~g-~~~~p~---~~---~~~---~~~-~~n~~E~~~l~~~~~-~~~ 137 (239)
.....+.++++ .-+-...+ .+.++++... .. ++|... +. ... ..+ .|+.-|++.|++... ...
T Consensus 98 ~~~~~~avviG-pGlG~~~~~~~~~~~~l~~~~-~p~ViDADaL~~la~~~~~~~~~~~VlTPH~gEf~rL~g~~~~~~~ 175 (284)
T COG0063 98 LVERADAVVIG-PGLGRDAEGQEALKELLSSDL-KPLVLDADALNLLAELPDLLDERKVVLTPHPGEFARLLGTEVDEIE 175 (284)
T ss_pred hhccCCEEEEC-CCCCCCHHHHHHHHHHHhccC-CCEEEeCcHHHHHHhCcccccCCcEEECCCHHHHHHhcCCcccccc
Confidence 44678888884 22334443 3333333332 23 455411 11 221 122 899999999998422 122
Q ss_pred cCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcC
Q psy6977 138 EDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKG 212 (239)
Q Consensus 138 ~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g 212 (239)
.+..+.++.+.++ .+.+||-.|..-++...+++.+..+.-. .-.=+=|.||..++-+..-|.++
T Consensus 176 ~~r~~~a~~~a~~-------~~~vvVLKG~~tvI~~~~g~~~~n~~G~----~~ma~GGtGDvLaGii~alLAq~ 239 (284)
T COG0063 176 VDRLEAARELAAK-------YGAVVVLKGAVTVIADPDGEVFVNPTGN----PGMATGGTGDVLAGIIGALLAQG 239 (284)
T ss_pred cchHHHHHHHHHH-------cCCEEEEeCCCCEEEcCCCcEEEcCCCC----HHhccCcchHHHHHHHHHHHhCC
Confidence 3445666666664 3456666777777775343443322221 22233479999877666666676
No 88
>PRK14038 ADP-dependent glucokinase; Provisional
Probab=91.79 E-value=2.8 Score=36.37 Aligned_cols=62 Identities=13% Similarity=0.035 Sum_probs=34.2
Q ss_pred hcccceeEEEEeccccccC---hHHHHHHHHHhhh---CC---------CCCh---hhHHHHhhHH---hcCHHHHHHHH
Q psy6977 72 KLIQNAEYYYVSGFFLTVS---PESILEVAKVALS---CT---------IRNI---NYLHHRFIYL---VLIDFEALAFA 130 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~---~g---------~~~~---p~~~~~~~~~---~~n~~E~~~l~ 130 (239)
++..++|.+++||++.-.. .+...++.+..+. .+ ..|. ..+.+++|++ -+|++|+..+.
T Consensus 220 ei~~~~Dl~vlSG~q~l~~~~~~~~l~~~~~~l~~l~~~~i~iH~EfAs~~d~~~r~~i~~ilp~vDSlGmNE~ELa~ll 299 (453)
T PRK14038 220 EIAKKAELAIISGLQALTEENYREPFETVREHLKVLNERGIPAHLEFAFTPDETVREEILGLLGKFYSVGLNEVELASIM 299 (453)
T ss_pred hhccCCCEEEEEchhhhccccHHHHHHHHHHHHHhcCcCCceEEEEeeccchHHHHHHHHhhCccccccccCHHHHHHHH
Confidence 5567899999999875321 1222233332222 12 1111 1112556665 59999999888
Q ss_pred HHc
Q psy6977 131 KQQ 133 (239)
Q Consensus 131 ~~~ 133 (239)
...
T Consensus 300 ~~l 302 (453)
T PRK14038 300 EVM 302 (453)
T ss_pred HHh
Confidence 743
No 89
>TIGR02045 P_fruct_ADP ADP-specific phosphofructokinase. Phosphofructokinase is a key enzyme of glycolysis. The phosphate group donor for different subtypes of phosphofructokinase can be ATP, ADP, or pyrophosphate. This family consists of ADP-dependent phosphofructokinases. Members are more similar to ADP-dependent glucokinases (excluded from this family) than to other phosphofructokinases.
Probab=91.40 E-value=5.4 Score=34.58 Aligned_cols=21 Identities=29% Similarity=0.389 Sum_probs=16.6
Q ss_pred CCcccCCCCchhhhHHHHHHH
Q psy6977 189 ESVVDTNGAGDSFVGGFLSQL 209 (239)
Q Consensus 189 ~~vvdt~GaGDaf~ag~~~~l 209 (239)
++.+.|+|-||+|+||-..++
T Consensus 419 ~~P~sTVGLGDtissgaF~~~ 439 (446)
T TIGR02045 419 ENPKSTVGLGDTISTGAFVSY 439 (446)
T ss_pred CCCcceeccCcccchhHHHHH
Confidence 478889999999988655544
No 90
>PHA00438 hypothetical protein
Probab=68.44 E-value=4.2 Score=25.69 Aligned_cols=17 Identities=35% Similarity=0.718 Sum_probs=15.1
Q ss_pred CCCchhhhHHHHHHHHc
Q psy6977 195 NGAGDSFVGGFLSQLIK 211 (239)
Q Consensus 195 ~GaGDaf~ag~~~~l~~ 211 (239)
.|..++|++||++|+..
T Consensus 47 ~G~SE~~IaGfl~Gl~y 63 (81)
T PHA00438 47 AGYSEAFIAGFLAGLQY 63 (81)
T ss_pred cCCcHHHHHHHHHHHHH
Confidence 69999999999999853
No 91
>KOG1615|consensus
Probab=65.02 E-value=62 Score=24.93 Aligned_cols=90 Identities=16% Similarity=0.151 Sum_probs=56.7
Q ss_pred hhcccceeEEEEeccccccChHHHHHHHHHhhhCC------------CCCh-hhHHHHhhHHhcCHHHHHHHHHH-cCCC
Q psy6977 71 NKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCT------------IRNI-NYLHHRFIYLVLIDFEALAFAKQ-QNFQ 136 (239)
Q Consensus 71 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g------------~~~~-p~~~~~~~~~~~n~~E~~~l~~~-~~~~ 136 (239)
.+.+..++.|.|+--...+..+.+.++.+++.... .+++ ..+..-+..+.++........-. +..=
T Consensus 10 ~~~~~~~~aVcFDvDSTvi~eEgIdelA~~~G~~~~Va~~T~rAMng~~~F~eaL~~Rl~llqp~~~qv~~~v~~~k~~l 89 (227)
T KOG1615|consen 10 AKLWRSADAVCFDVDSTVIQEEGIDELAAYCGVGEAVAEVTRRAMNGEADFQEALAARLSLLQPLQVQVEQFVIKQKPTL 89 (227)
T ss_pred HHHHHhcCeEEEecCcchhHHhhHHHHHHHhCchHHHHHHHHHHhCCCCcHHHHHHHHHHHhcccHHHHHHHHhcCCCcc
Confidence 36777889998863222255677777777765432 2333 33333334447887776665544 2223
Q ss_pred ccCHHHHHHHHhcCCCCCCCCceEEEEeeC
Q psy6977 137 TEDLHAIALKISNLPKQNPNRERITIITQG 166 (239)
Q Consensus 137 ~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G 166 (239)
...++++..+|+++ |++..+++-|
T Consensus 90 T~Gi~eLv~~L~~~------~~~v~liSGG 113 (227)
T KOG1615|consen 90 TPGIRELVSRLHAR------GTQVYLISGG 113 (227)
T ss_pred CCCHHHHHHHHHHc------CCeEEEEcCC
Confidence 46789999999995 8888888765
No 92
>PF10911 DUF2717: Protein of unknown function (DUF2717); InterPro: IPR020121 The proteins in this entry are uncharacterised.
Probab=62.82 E-value=6.3 Score=24.89 Aligned_cols=17 Identities=35% Similarity=0.599 Sum_probs=15.3
Q ss_pred CCCchhhhHHHHHHHHc
Q psy6977 195 NGAGDSFVGGFLSQLIK 211 (239)
Q Consensus 195 ~GaGDaf~ag~~~~l~~ 211 (239)
.|+.++|++||+.|+..
T Consensus 47 ~G~SE~~I~Gfl~Gl~~ 63 (77)
T PF10911_consen 47 QGWSESYILGFLAGLQY 63 (77)
T ss_pred ccccHHHHHHHHHHHHH
Confidence 69999999999999854
No 93
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=59.93 E-value=55 Score=25.41 Aligned_cols=71 Identities=8% Similarity=-0.133 Sum_probs=45.4
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhCC---CCCh----h--hHHHHhhHH--------hcCHHHHHHHHHHcCCCcc
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSCT---IRNI----N--YLHHRFIYL--------VLIDFEALAFAKQQNFQTE 138 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~----p--~~~~~~~~~--------~~n~~E~~~l~~~~~~~~~ 138 (239)
...-|.+||--+.+.++.+.++++.+++.| .++. | .+.++++++ ..+.+....++|. +.+
T Consensus 38 sggGVt~SGGEPllq~~fl~~l~~~~k~~gi~~~leTnG~~~~~~~~~l~~~~D~~l~DiK~~d~~~~~~~tG~---~~~ 114 (213)
T PRK10076 38 SGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPASKLLPLAKLCDEVLFDLKIMDATQARDVVKM---NLP 114 (213)
T ss_pred CCCEEEEeCchHHcCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHhcCEEEEeeccCCHHHHHHHHCC---CHH
Confidence 346788887655577888999999999998 3333 2 334566654 3566666777764 233
Q ss_pred CHHHHHHHHhc
Q psy6977 139 DLHAIALKISN 149 (239)
Q Consensus 139 ~~~~~~~~l~~ 149 (239)
.+.+-++.+.+
T Consensus 115 ~il~nl~~l~~ 125 (213)
T PRK10076 115 RVLENLRLLVS 125 (213)
T ss_pred HHHHHHHHHHh
Confidence 44444555555
No 94
>KOG0174|consensus
Probab=57.21 E-value=8.9 Score=29.05 Aligned_cols=42 Identities=24% Similarity=0.382 Sum_probs=36.1
Q ss_pred CCCchhhhHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHhccCc
Q psy6977 195 NGAGDSFVGGFLSQL-IKGEPLSVCIECGVWAAQHIIQVSGCT 236 (239)
Q Consensus 195 ~GaGDaf~ag~~~~l-~~g~~~~~a~~~a~~~a~~~~~~~G~~ 236 (239)
-|.|-+|+=||+-.- -.+++++||++|-..|-+.++.+-|..
T Consensus 147 gGSGStfIYGf~D~~~r~nMt~EE~~~fvk~Av~lAi~rDGsS 189 (224)
T KOG0174|consen 147 GGSGSTFIYGFCDANWRPNMTLEECVRFVKNAVSLAIERDGSS 189 (224)
T ss_pred ccCCceeeeeeehhhcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 589999988888774 458999999999999999999988865
No 95
>PF13986 DUF4224: Domain of unknown function (DUF4224)
Probab=53.08 E-value=29 Score=19.78 Aligned_cols=33 Identities=9% Similarity=-0.083 Sum_probs=23.9
Q ss_pred hcCHHHHHHHHHHcCCCccCHHHHHHHHhcCCCCCCCCceEEEE
Q psy6977 120 VLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITII 163 (239)
Q Consensus 120 ~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvv 163 (239)
+.+.+|+..|+|. .....-+++|.+. |+..++-
T Consensus 2 fLT~~El~elTG~-----k~~~~Q~~~L~~~------Gi~~~~~ 34 (47)
T PF13986_consen 2 FLTDEELQELTGY-----KRPSKQIRWLRRN------GIPFVVR 34 (47)
T ss_pred CCCHHHHHHHHCC-----CCHHHHHHHHHHC------CCeeEEC
Confidence 4678999999987 4566666777774 8776643
No 96
>PF02659 DUF204: Domain of unknown function DUF; InterPro: IPR003810 Uncharacterised domain in proteins of unknown function.
Probab=46.01 E-value=59 Score=19.76 Aligned_cols=21 Identities=24% Similarity=0.283 Sum_probs=15.0
Q ss_pred hhhhHHHHHHHHcCCCHHHHHH
Q psy6977 199 DSFVGGFLSQLIKGEPLSVCIE 220 (239)
Q Consensus 199 Daf~ag~~~~l~~g~~~~~a~~ 220 (239)
|+|.+|+.+++. +.+..+.+.
T Consensus 4 Daf~vg~~~g~~-~~~~~~~~~ 24 (67)
T PF02659_consen 4 DAFAVGISYGLR-GISRRIILL 24 (67)
T ss_pred HHHHHHHHHHHH-cCChHHHHH
Confidence 999999999998 444333333
No 97
>PF04587 ADP_PFK_GK: ADP-specific Phosphofructokinase/Glucokinase conserved region; InterPro: IPR007666 Although ATP is the most common phosphoryl group donor for kinases, certain hyperthermophilic archaea, such as Thermococcus litoralis and Pyrococcus furiosus, utilise unusual ADP-dependent glucokinases (ADPGKs) and phosphofructokinases (ADPPKKs) in their glycolytic pathways [, , ]. ADPGKs and ADPPFKs exhibit significant similarity, and form an ADP-dependent kinase (ADPK) family, which was tentatively named the PFKC family []. A ~460-residue ADPK domain is also found in a bifunctional ADP-dependent gluco/phosphofructo- kinase (ADP-GK/PFK) from Methanocaldococcus jannaschii (Methanococcus jannaschii) as well as in homologous hypothetical proteins present in several eukaryotes []. The whole structure of the ADPK domain can be divided into large and small alpha/beta subdomains. The larger subdomain, which carries the ADP binding site, consists of a twisted 12-stranded beta sheet flanked on both faces by 13 alpha helices and three 3(10) helices, forming an alpha/beta 3-layer sandwich. The smaller subdomain, which covers the active site, forms an alpha/beta two-layer structure containing 5 beta strands and four alpha helices. The ADP molecule is buried in a shallow pocket in the large subdomain. The binding of substrate sugar induces a structural change, the small domain closing to form a complete substrate sugar binding site [, , ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 1GC5_A 1L2L_A 3DRW_B 1U2X_A 1UA4_A.
Probab=42.37 E-value=28 Score=30.44 Aligned_cols=20 Identities=25% Similarity=0.302 Sum_probs=13.5
Q ss_pred CCcccCCCCchhhhHHHHHH
Q psy6977 189 ESVVDTNGAGDSFVGGFLSQ 208 (239)
Q Consensus 189 ~~vvdt~GaGDaf~ag~~~~ 208 (239)
++.+.|+|.||++.|+-+++
T Consensus 423 ~~P~~TVGlGD~ISa~~f~~ 442 (444)
T PF04587_consen 423 KKPKSTVGLGDTISAGGFVY 442 (444)
T ss_dssp SS-S--TTHHHHHHHHHHHH
T ss_pred CCCcccccCcchhhhhhHHh
Confidence 47888999999999865544
No 98
>PRK09444 pntB pyridine nucleotide transhydrogenase; Provisional
Probab=40.31 E-value=67 Score=28.08 Aligned_cols=68 Identities=19% Similarity=0.251 Sum_probs=44.5
Q ss_pred HHHHHHHHhcCCeeeEEecC--CCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEEEEeccccc
Q psy6977 11 DILESKASEFGLVVKYQHHD--TEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYYYVSGFFLT 88 (239)
Q Consensus 11 ~~i~~~l~~~gI~~~~v~~~--~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~g~~~~ 88 (239)
+++.+.|+++|++++|-..+ ++=+|.-.++..+.+.. | +.-+..++|. +.++++|++++-|-.-.
T Consensus 327 ~el~~~L~~~Gv~V~faIHPVAGRMPGHMNVLLAEA~VP-----Y---d~v~eMdeIN-----~~F~~tDvalVIGANDv 393 (462)
T PRK09444 327 AEITEKLRARGINVRFGIHPVAGRLPGHMNVLLAEAKVP-----Y---DIVLEMDEIN-----DDFADTDTVLVIGANDT 393 (462)
T ss_pred HHHHHHHHHCCCeEEEEeccccccCCCcceeEEeecCCC-----H---HHHHhHHhhc-----cccccCCEEEEecCccC
Confidence 46788999999999985543 66666777777764422 2 2344445555 56778999988774433
Q ss_pred cCh
Q psy6977 89 VSP 91 (239)
Q Consensus 89 ~~~ 91 (239)
++|
T Consensus 394 VNP 396 (462)
T PRK09444 394 VNP 396 (462)
T ss_pred CCc
Confidence 443
No 99
>COG1180 PflA Pyruvate-formate lyase-activating enzyme [Posttranslational modification, protein turnover, chaperones]
Probab=37.52 E-value=1.9e+02 Score=23.17 Aligned_cols=71 Identities=15% Similarity=0.021 Sum_probs=45.6
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhCC---CCCh-----hh-HHHHhhHH-------hcCHHH-HHHHHHHcCCCcc
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSCT---IRNI-----NY-LHHRFIYL-------VLIDFE-ALAFAKQQNFQTE 138 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-----p~-~~~~~~~~-------~~n~~E-~~~l~~~~~~~~~ 138 (239)
..+.|.+||--+.+-.+.+.++++.+++.| .++. +. ..++++++ +...++ .+.+++. +.+
T Consensus 83 ~~~gvt~SGGEP~~q~e~~~~~~~~ake~Gl~~~l~TnG~~~~~~~~~l~~~~D~v~~DlK~~~~~~y~~~tg~---~~~ 159 (260)
T COG1180 83 SGGGVTFSGGEPTLQAEFALDLLRAAKERGLHVALDTNGFLPPEALEELLPLLDAVLLDLKAFDDELYRKLTGA---DNE 159 (260)
T ss_pred CCCEEEEECCcchhhHHHHHHHHHHHHHCCCcEEEEcCCCCCHHHHHHHHhhcCeEEEeeccCChHHHHHHhCC---CcH
Confidence 678888888666677899999999999998 3333 22 23455543 433344 6777765 234
Q ss_pred CHHHHHHHHhc
Q psy6977 139 DLHAIALKISN 149 (239)
Q Consensus 139 ~~~~~~~~l~~ 149 (239)
.+.+.++.+.+
T Consensus 160 ~vl~~~~~l~~ 170 (260)
T COG1180 160 PVLENLELLAD 170 (260)
T ss_pred HHHHHHHHHHc
Confidence 45555555555
No 100
>cd04868 ACT_AK-like ACT domains C-terminal to the catalytic domain of aspartokinase (AK; 4-L-aspartate-4-phosphotransferase). This CD includes each of two ACT domains C-terminal to the catalytic domain of aspartokinase (AK; 4-L-aspartate-4-phosphotransferase). Typically, AK consists of two ACT domains in a tandem repeat, but the second ACT domain is inserted within the first, resulting in, what is normally the terminal beta strand of ACT2, formed from a region N-terminal of ACT1. AK catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. Aspartokinase is the first enzyme in the pathway of the biosynthesis of the aspartate family of amino acids (lysine, threonine, methionine, and isoleucine) and the bacterial cell wall component, meso-diaminopimelate. One mechanism for the regulation of this pathway is by the production of several isoenzymes of aspartokinase with different repressors and allosteric inhibitors. Pairs of ACT domains are proposed to specifically bind am
Probab=36.50 E-value=80 Score=17.60 Aligned_cols=24 Identities=17% Similarity=0.145 Sum_probs=18.9
Q ss_pred chHHHHHHHHHhcCCeeeEEecCC
Q psy6977 8 NYSDILESKASEFGLVVKYQHHDT 31 (239)
Q Consensus 8 ~~g~~i~~~l~~~gI~~~~v~~~~ 31 (239)
.+-..+.+.|.+.+|++..+....
T Consensus 15 ~~~~~i~~~l~~~~i~i~~i~~~~ 38 (60)
T cd04868 15 GVAAKIFSALAEAGINVDMISQSE 38 (60)
T ss_pred CHHHHHHHHHHHCCCcEEEEEcCC
Confidence 345568899999999999887643
No 101
>KOG3361|consensus
Probab=35.89 E-value=42 Score=23.82 Aligned_cols=31 Identities=19% Similarity=0.360 Sum_probs=23.5
Q ss_pred CCCCchhhhHH-HHHHHHcCCCHHHHHHHHHH
Q psy6977 194 TNGAGDSFVGG-FLSQLIKGEPLSVCIECGVW 224 (239)
Q Consensus 194 t~GaGDaf~ag-~~~~l~~g~~~~~a~~~a~~ 224 (239)
|.|||-+..+. ++.-+.+|.++++++..-+.
T Consensus 86 TFGCGSAIASSS~aTewvkgkt~dea~kIkNt 117 (157)
T KOG3361|consen 86 TFGCGSAIASSSLATEWVKGKTLDEALKIKNT 117 (157)
T ss_pred ecccchHhhhhHHHHHHHccccHHHHHhcccH
Confidence 68999988764 44557899999998875443
No 102
>PF11167 DUF2953: Protein of unknown function (DUF2953); InterPro: IPR021338 This family of proteins has no known function.
Probab=34.26 E-value=31 Score=20.00 Aligned_cols=17 Identities=35% Similarity=0.407 Sum_probs=15.0
Q ss_pred CCCchhhhHHHHHHHHc
Q psy6977 195 NGAGDSFVGGFLSQLIK 211 (239)
Q Consensus 195 ~GaGDaf~ag~~~~l~~ 211 (239)
.|.+|+...|.+++++.
T Consensus 3 ~G~~Daa~Tgi~~G~l~ 19 (53)
T PF11167_consen 3 IGLGDAADTGILYGLLW 19 (53)
T ss_pred eeccCHHHHHHHHHHHH
Confidence 58999999999999865
No 103
>PF04252 RNA_Me_trans: Predicted SAM-dependent RNA methyltransferase; InterPro: IPR007364 This family of proteins are predicted to be alpha/beta-knot SAM-dependent RNA methyltransferases [].
Probab=33.94 E-value=51 Score=25.24 Aligned_cols=45 Identities=20% Similarity=0.367 Sum_probs=31.7
Q ss_pred CceeEeechhhhhccCCCCCCCchhhhcccceeEEEEeccccccCh-HHHHHHHH
Q psy6977 46 KARSLVANLAAANLFTPDHLHVPENNKLIQNAEYYYVSGFFLTVSP-ESILEVAK 99 (239)
Q Consensus 46 ~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~ 99 (239)
..|.++-++.+...|+|++.+ +.++|+|.|+..+-|+ +-..++..
T Consensus 62 ~~~VcLLDP~A~~~L~PeD~~---------~fd~fvfGGILGD~PPrdRT~eLr~ 107 (196)
T PF04252_consen 62 KSRVCLLDPAAEKELSPEDGE---------KFDYFVFGGILGDHPPRDRTSELRT 107 (196)
T ss_pred cCCEEEeCCCCCCCCCccccC---------cccEEEECcccCCCCCCCchHHHHh
Confidence 345666778888888887654 6999999998877655 34444443
No 104
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=32.67 E-value=1.6e+02 Score=20.11 Aligned_cols=40 Identities=15% Similarity=0.238 Sum_probs=27.1
Q ss_pred cCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEec
Q psy6977 138 EDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPV 183 (239)
Q Consensus 138 ~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~ 183 (239)
.+..++++.++++ |++.+.+|..+..-+.-..+.....+.
T Consensus 61 ~~~~~~~~~a~~~------g~~vi~iT~~~~s~la~~ad~~l~~~~ 100 (128)
T cd05014 61 DELLNLLPHLKRR------GAPIIAITGNPNSTLAKLSDVVLDLPV 100 (128)
T ss_pred HHHHHHHHHHHHC------CCeEEEEeCCCCCchhhhCCEEEECCC
Confidence 4456677777774 999999998877766544444444443
No 105
>PF14748 P5CR_dimer: Pyrroline-5-carboxylate reductase dimerisation; PDB: 2RCY_D 3TRI_A 2IZZ_B 2GR9_B 2GRA_B 2GER_C 1YQG_A 2AG8_A 3GT0_A 2AMF_E ....
Probab=32.05 E-value=1.2e+02 Score=20.53 Aligned_cols=32 Identities=19% Similarity=0.246 Sum_probs=24.4
Q ss_pred cCCCCchhhhHHHHHHHH-----cCCCHHHHHHHHHH
Q psy6977 193 DTNGAGDSFVGGFLSQLI-----KGEPLSVCIECGVW 224 (239)
Q Consensus 193 dt~GaGDaf~ag~~~~l~-----~g~~~~~a~~~a~~ 224 (239)
..+|+|-+|+..|+.++. .|.+.++|.+++..
T Consensus 11 alsGsgpA~~~~~~eal~~a~v~~Gl~~~~A~~lv~~ 47 (107)
T PF14748_consen 11 ALSGSGPAYFFLFIEALADAAVAQGLPREEARKLVAQ 47 (107)
T ss_dssp HHCTTHHHHHHHHHHHHHHHHHHTT--HHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 348999999999998885 47888888877665
No 106
>PF04587 ADP_PFK_GK: ADP-specific Phosphofructokinase/Glucokinase conserved region; InterPro: IPR007666 Although ATP is the most common phosphoryl group donor for kinases, certain hyperthermophilic archaea, such as Thermococcus litoralis and Pyrococcus furiosus, utilise unusual ADP-dependent glucokinases (ADPGKs) and phosphofructokinases (ADPPKKs) in their glycolytic pathways [, , ]. ADPGKs and ADPPFKs exhibit significant similarity, and form an ADP-dependent kinase (ADPK) family, which was tentatively named the PFKC family []. A ~460-residue ADPK domain is also found in a bifunctional ADP-dependent gluco/phosphofructo- kinase (ADP-GK/PFK) from Methanocaldococcus jannaschii (Methanococcus jannaschii) as well as in homologous hypothetical proteins present in several eukaryotes []. The whole structure of the ADPK domain can be divided into large and small alpha/beta subdomains. The larger subdomain, which carries the ADP binding site, consists of a twisted 12-stranded beta sheet flanked on both faces by 13 alpha helices and three 3(10) helices, forming an alpha/beta 3-layer sandwich. The smaller subdomain, which covers the active site, forms an alpha/beta two-layer structure containing 5 beta strands and four alpha helices. The ADP molecule is buried in a shallow pocket in the large subdomain. The binding of substrate sugar induces a structural change, the small domain closing to form a complete substrate sugar binding site [, , ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 1GC5_A 1L2L_A 3DRW_B 1U2X_A 1UA4_A.
Probab=31.71 E-value=71 Score=27.98 Aligned_cols=62 Identities=11% Similarity=0.052 Sum_probs=32.5
Q ss_pred hcccceeEEEEeccccccC----h-------HHHHHHHHHhhh-CC---------CCChh----hHHHHhhHH---hcCH
Q psy6977 72 KLIQNAEYYYVSGFFLTVS----P-------ESILEVAKVALS-CT---------IRNIN----YLHHRFIYL---VLID 123 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~----~-------~~~~~~~~~~~~-~g---------~~~~p----~~~~~~~~~---~~n~ 123 (239)
+...++|.+++||+++-.. . +.+.+.++..++ .+ ..|.. .+..++|++ =+|+
T Consensus 205 ~~~~~~d~~vlSGlq~l~~~~~d~~~~~~~l~~~~~~i~~l~~~~~~~iH~E~As~~d~~l~~~i~~~ilp~vDSlGmNE 284 (444)
T PF04587_consen 205 EIAFKPDLAVLSGLQMLDEFYFDGETYEERLKRLKEQIKLLKSNPDIPIHLELASFADEELRKEILEKILPHVDSLGMNE 284 (444)
T ss_dssp HHHTT-SEEEEE-GGG--TB-TTSTCHHHHHHHHHHHHHHHH-HTT-EEEEE----SSHHHHHHHHHHHGGGSSEEEEEH
T ss_pred hhccCCCEEEEeccccchhhccchhHHHHHHHHHHHHHHhccCCCCCceEEEeccccCHHHHHHHHHHhhccccccccCH
Confidence 3445699999999886421 1 123333334442 22 11211 122666776 6999
Q ss_pred HHHHHHHHHc
Q psy6977 124 FEALAFAKQQ 133 (239)
Q Consensus 124 ~E~~~l~~~~ 133 (239)
+|+..+....
T Consensus 285 qEL~~l~~~l 294 (444)
T PF04587_consen 285 QELANLLSVL 294 (444)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999887753
No 107
>cd04918 ACT_AK1-AT_2 ACT domains located C-terminal to the catalytic domain of a monofunctional, lysine-sensitive, plant aspartate kinase 1 (AK1). This CD includes the second of two ACT domains located C-terminal to the catalytic domain of a monofunctional, lysine-sensitive, plant aspartate kinase 1 (AK1), which can be synergistically inhibited by S-adenosylmethionine (SAM). This isoenzyme is found in higher plants, Arabidopsis thaliana (AT) and Zea mays, and also in Chlorophyta. In its inactive state, Arabidopsis AK1 binds the effectors lysine and SAM (two molecules each) at the interface of two ACT1 domain subunits. The second ACT domain (ACT2), this CD, does not interact with an effector. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=31.22 E-value=1.2e+02 Score=18.11 Aligned_cols=29 Identities=7% Similarity=-0.070 Sum_probs=20.7
Q ss_pred HHHHHHHHHhcCCeeeEEecCCCCceeEE
Q psy6977 10 SDILESKASEFGLVVKYQHHDTEPTGTCA 38 (239)
Q Consensus 10 g~~i~~~l~~~gI~~~~v~~~~~~t~~~~ 38 (239)
...+.+.|.+.||++..+.....+...++
T Consensus 17 ~~~i~~aL~~~~I~v~~i~~g~s~~sis~ 45 (65)
T cd04918 17 LERAFHVLYTKGVNVQMISQGASKVNISL 45 (65)
T ss_pred HHHHHHHHHHCCCCEEEEEecCccceEEE
Confidence 45788889999999998876443444443
No 108
>COG1282 PntB NAD/NADP transhydrogenase beta subunit [Energy production and conversion]
Probab=30.50 E-value=59 Score=27.57 Aligned_cols=68 Identities=19% Similarity=0.266 Sum_probs=43.6
Q ss_pred HHHHHHHHhcCCeeeEEecC--CCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEEEEeccccc
Q psy6977 11 DILESKASEFGLVVKYQHHD--TEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYYYVSGFFLT 88 (239)
Q Consensus 11 ~~i~~~l~~~gI~~~~v~~~--~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~g~~~~ 88 (239)
+++-+.|+++||+++|-..+ ++-++.-.++..+.+ +-| ..-+..|+|. ..+.++|++++-|..-.
T Consensus 329 ~E~~~~L~~~Gv~VrfaIHPVAGRmPGHMNVLLAEA~-----VpY---d~v~emddIN-----~dF~~tDVvlVIGANDv 395 (463)
T COG1282 329 AEITEKLRARGVNVRFAIHPVAGRMPGHMNVLLAEAK-----VPY---DIVLEMDEIN-----DDFADTDVVLVIGANDV 395 (463)
T ss_pred HHHHHHHHhcCCeeeEeecccccCCCcchhhhhhhcc-----CCH---HHHhhHHhhc-----chhccccEEEEEccCCC
Confidence 46778999999999986543 555555566665433 112 2455556666 56788999988665433
Q ss_pred cCh
Q psy6977 89 VSP 91 (239)
Q Consensus 89 ~~~ 91 (239)
.+|
T Consensus 396 vNP 398 (463)
T COG1282 396 VNP 398 (463)
T ss_pred CCh
Confidence 444
No 109
>PRK13883 conjugal transfer protein TrbH; Provisional
Probab=30.25 E-value=1.4e+02 Score=21.88 Aligned_cols=20 Identities=15% Similarity=0.262 Sum_probs=17.9
Q ss_pred CCchHHHHHHHHHhcCCeee
Q psy6977 6 KDNYSDILESKASEFGLVVK 25 (239)
Q Consensus 6 ~D~~g~~i~~~l~~~gI~~~ 25 (239)
.|+||..+.+.|+.+|.-+-
T Consensus 62 ~D~Fg~aL~~aLR~~GYaV~ 81 (151)
T PRK13883 62 PDAFGQALVKALRDKGYALL 81 (151)
T ss_pred CcHHHHHHHHHHHHcCeEEE
Confidence 58999999999999998764
No 110
>cd04904 ACT_AAAH ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH). ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH): Phenylalanine hydroxylases (PAH), tyrosine hydroxylases (TH) and tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes. This family of enzymes shares a common catalytic mechanism, in which dioxygen is used by an active site containing a single, reduced iron atom to hydroxylate an unactivated aromatic substrate, concomitant with a two-electron oxidation of tetrahydropterin (BH4) cofactor to its quinonoid dihydropterin form. PAH catalyzes the hydroxylation of L-Phe to L-Tyr, the first step in the catabolic degradation of L-Phe; TH catalyses the hydroxylation of L-Tyr to 3,4-dihydroxyphenylalanine, the rate limiting step in the biosynthesis of catecholamines; and TPH catalyses the hydroxylation of L-Trp to 5-hydroxytryptophan, the rate limiting step in the biosynthesis of 5-hydroxy
Probab=28.81 E-value=1.5e+02 Score=18.36 Aligned_cols=31 Identities=10% Similarity=0.102 Sum_probs=21.3
Q ss_pred HHHHHHHhcCCeeeEEe-cCCC-CceeEEEEEe
Q psy6977 12 ILESKASEFGLVVKYQH-HDTE-PTGTCAVLIT 42 (239)
Q Consensus 12 ~i~~~l~~~gI~~~~v~-~~~~-~t~~~~~~~~ 42 (239)
.+++.++.+||++..+. ++.. ....+..+++
T Consensus 16 ~vL~~f~~~~iNlt~IeSRP~~~~~~~y~Ffvd 48 (74)
T cd04904 16 RALKLFEEFGVNLTHIESRPSRRNGSEYEFFVD 48 (74)
T ss_pred HHHHHHHHCCCcEEEEECCCCCCCCceEEEEEE
Confidence 37889999999999998 4422 3344555554
No 111
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=28.09 E-value=1.4e+02 Score=22.09 Aligned_cols=76 Identities=18% Similarity=0.148 Sum_probs=37.8
Q ss_pred HHHHHHHHhcCCeeeEEecCCCC-----ceeEEEEEecCCCceeEeechhhhhccCCCCC-CCchhhhcccce-eEEEEe
Q psy6977 11 DILESKASEFGLVVKYQHHDTEP-----TGTCAVLITDNGKARSLVANLAAANLFTPDHL-HVPENNKLIQNA-EYYYVS 83 (239)
Q Consensus 11 ~~i~~~l~~~gI~~~~v~~~~~~-----t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i-~~~~~~~~~~~~-~~~~~~ 83 (239)
+.+.+.|++.|+.+..+....+. .+.-..-..+.+..++.+..+.....++.... +-....+.+..+ |++++-
T Consensus 20 e~lv~~L~~~G~rVa~iKH~hh~~~~D~~GkDs~r~~~aGa~~~v~~s~~~~~~~~~~~~~~L~~vl~~l~~~~D~vLVE 99 (161)
T COG1763 20 EKLVRKLKARGYRVATVKHAHHDFDLDKPGKDTYRHRKAGADQVVVASDHRTALMTRTPDRDLDAVLSRLDPLLDLVLVE 99 (161)
T ss_pred HHHHHHHHhCCcEEEEEEecCCCCCCCCCCCccchhhccccceEEEecCCEEEEEEecCCcCHHHHHHhcCcccCEEEEe
Confidence 56788899999999988865332 11111111111333333332222222222221 111233555555 999998
Q ss_pred ccc
Q psy6977 84 GFF 86 (239)
Q Consensus 84 g~~ 86 (239)
|+-
T Consensus 100 GFK 102 (161)
T COG1763 100 GFK 102 (161)
T ss_pred ccc
Confidence 875
No 112
>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.
Probab=27.78 E-value=1.6e+02 Score=20.35 Aligned_cols=45 Identities=9% Similarity=0.005 Sum_probs=25.7
Q ss_pred hHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeech
Q psy6977 9 YSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANL 54 (239)
Q Consensus 9 ~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~ 54 (239)
.=+.+.+.|++.||++.........-+.+..+.|+ +|....+...
T Consensus 78 ~ld~~~~~l~~~gv~~~~~~~~~~~~g~~~yf~DP-dG~~iEl~~~ 122 (131)
T cd08364 78 DVDEYTERIKALGVEMKPPRPRVQGEGRSIYFYDF-DNHLFELHTG 122 (131)
T ss_pred HHHHHHHHHHHCCCEEecCCccccCCceEEEEECC-CCCEEEEecC
Confidence 34568899999999865432111112345555665 6666555443
No 113
>cd04931 ACT_PAH ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). PAH catalyzes the hydroxylation of L-Phe to L-Tyr, the first step in the catabolic degradation of L-Phe. In PAH, an autoregulatory sequence, N-terminal of the ACT domain, extends across the catalytic domain active site and regulates the enzyme by intrasteric regulation. It appears that the activation by L-Phe induces a conformational change that converts the enzyme to a high-affinity and high-activity state. Modulation of activity is achieved through inhibition by BH4 and activation by phosphorylation of serine residues of the autoregulatory region. The molecular basis for the cooperative activation process is not fully understood yet. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=26.92 E-value=1.8e+02 Score=19.08 Aligned_cols=31 Identities=6% Similarity=-0.045 Sum_probs=21.4
Q ss_pred HHHHHHHhcCCeeeEEe-cCC-CCceeEEEEEe
Q psy6977 12 ILESKASEFGLVVKYQH-HDT-EPTGTCAVLIT 42 (239)
Q Consensus 12 ~i~~~l~~~gI~~~~v~-~~~-~~t~~~~~~~~ 42 (239)
.+++.++..||++..+. ++. .....+..+++
T Consensus 30 ~vL~~Fa~~~INLt~IeSRP~~~~~~~Y~FfVD 62 (90)
T cd04931 30 KVLRLFEEKDINLTHIESRPSRLNKDEYEFFIN 62 (90)
T ss_pred HHHHHHHHCCCCEEEEEeccCCCCCceEEEEEE
Confidence 37889999999999998 443 24444555554
No 114
>PF02700 PurS: Phosphoribosylformylglycinamidine (FGAM) synthase; InterPro: IPR003850 Phosphoribosylformylglycinamidine(FGAM) synthetase, 6.3.5.3 from EC, catalyses the fourth step in the de novo purine biosynthetic pathway []. 5-phosphoribosylformylglycinamide (FGAR) + glutamine + ATP = FGAM + glutamate + ADP + Pi In eukaryotes and many bacterial systems (including Escherichia coli and Salmonella typhimurium), the FGAM synthetase is encoded by the large form of PurL (lgPurL), which contains an N-terminal ATPase domain and a C-terminal glutamine-binding domain. In archaeal and other bacterial systems, however, FGAM synthetase is encoded by separate genes, making it a multisubunit (rather than multidomain) enzyme. The protein is composed of the small form of PurL (smPurL), which is homologus to the ATPase domain of lgPurL, PurQ which is homologous to the glutamine-binding domain of of lgPurL, and PurS, whose function is not known. This entry represents the PurS subunit of the multisubunit FGAM synthetase. Recent studies showed that disruption of the purS gene in Bacillus subtilis resulted in a purine auxotrophic phenotype, due to defective FGAM synthetase activity. Therefore, the PurS protein appears to be required for the function of the PurL and PurQ subunits of the FGAM synthetase, but the molecular mechanism for the functional role of PurS is currently not known. For additional information please see [, ].; GO: 0016879 ligase activity, forming carbon-nitrogen bonds; PDB: 2ZW2_B 3D54_B 1VQ3_B 1GTD_A 2YX5_A 2CUW_A 1TWJ_B 1T4A_B 2DGB_B.
Probab=26.78 E-value=73 Score=20.47 Aligned_cols=24 Identities=17% Similarity=0.159 Sum_probs=17.6
Q ss_pred CCchHHHHHHHHHhcCCe-eeEEec
Q psy6977 6 KDNYSDILESKASEFGLV-VKYQHH 29 (239)
Q Consensus 6 ~D~~g~~i~~~l~~~gI~-~~~v~~ 29 (239)
.|+.|+.+++.|...|.+ +..++.
T Consensus 14 lDPqG~ai~~al~~lG~~~v~~Vr~ 38 (80)
T PF02700_consen 14 LDPQGEAIKRALHRLGYDGVKDVRV 38 (80)
T ss_dssp --HHHHHHHHHHHHTT-TTEEEEEE
T ss_pred cCcHHHHHHHHHHHcCCcccCcEEE
Confidence 489999999999999987 565543
No 115
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=26.55 E-value=1.1e+02 Score=20.10 Aligned_cols=32 Identities=25% Similarity=0.155 Sum_probs=24.7
Q ss_pred hcccceeEEEEeccccccChHHHHHHHHHhhhCC
Q psy6977 72 KLIQNAEYYYVSGFFLTVSPESILEVAKVALSCT 105 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g 105 (239)
..+.++|+|++- +-.++.+....+-+.|++.+
T Consensus 44 ~~i~~aD~VIv~--t~~vsH~~~~~vk~~akk~~ 75 (97)
T PF10087_consen 44 SKIKKADLVIVF--TDYVSHNAMWKVKKAAKKYG 75 (97)
T ss_pred HhcCCCCEEEEE--eCCcChHHHHHHHHHHHHcC
Confidence 567789998872 22377888888999999877
No 116
>PRK06444 prephenate dehydrogenase; Provisional
Probab=25.48 E-value=1.8e+02 Score=22.25 Aligned_cols=24 Identities=29% Similarity=0.277 Sum_probs=18.5
Q ss_pred CcccC-CchHHHHHHHHHhcCCeee
Q psy6977 2 GAVGK-DNYSDILESKASEFGLVVK 25 (239)
Q Consensus 2 ~~vG~-D~~g~~i~~~l~~~gI~~~ 25 (239)
+.+|. ...|+++.+.+++.|..+.
T Consensus 4 ~iiG~~G~mG~~~~~~~~~~g~~v~ 28 (197)
T PRK06444 4 IIIGKNGRLGRVLCSILDDNGLGVY 28 (197)
T ss_pred EEEecCCcHHHHHHHHHHhCCCEEE
Confidence 45564 7889999999999887753
No 117
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=25.48 E-value=41 Score=23.22 Aligned_cols=90 Identities=9% Similarity=0.082 Sum_probs=47.0
Q ss_pred CCccc-CCchHHHHHHHHHhcCCeeeEEec--CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccce
Q psy6977 1 MGAVG-KDNYSDILESKASEFGLVVKYQHH--DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNA 77 (239)
Q Consensus 1 i~~vG-~D~~g~~i~~~l~~~gI~~~~v~~--~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~ 77 (239)
|+.|| ...-|..+.+.|.+ +=+.+.+.. .....+..+....+ .......+..++.+ .+.+.++
T Consensus 2 V~IvGAtG~vG~~l~~lL~~-hp~~e~~~~~~~~~~~g~~~~~~~~---------~~~~~~~~~~~~~~----~~~~~~~ 67 (121)
T PF01118_consen 2 VAIVGATGYVGRELLRLLAE-HPDFELVALVSSSRSAGKPLSEVFP---------HPKGFEDLSVEDAD----PEELSDV 67 (121)
T ss_dssp EEEESTTSHHHHHHHHHHHH-TSTEEEEEEEESTTTTTSBHHHTTG---------GGTTTEEEBEEETS----GHHHTTE
T ss_pred EEEECCCCHHHHHHHHHHhc-CCCccEEEeeeeccccCCeeehhcc---------ccccccceeEeecc----hhHhhcC
Confidence 45678 88889999999887 344443332 11111111100000 00000111111111 1456899
Q ss_pred eEEEEeccccccChHHHHHHHHHhhhCC--CCCh
Q psy6977 78 EYYYVSGFFLTVSPESILEVAKVALSCT--IRNI 109 (239)
Q Consensus 78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~g--~~~~ 109 (239)
|+++++ .+.....++...+.+.| ++|.
T Consensus 68 Dvvf~a-----~~~~~~~~~~~~~~~~g~~ViD~ 96 (121)
T PF01118_consen 68 DVVFLA-----LPHGASKELAPKLLKAGIKVIDL 96 (121)
T ss_dssp SEEEE------SCHHHHHHHHHHHHHTTSEEEES
T ss_pred CEEEec-----CchhHHHHHHHHHhhCCcEEEeC
Confidence 999884 45667777777777778 5555
No 118
>COG0547 TrpD Anthranilate phosphoribosyltransferase [Amino acid transport and metabolism]
Probab=25.10 E-value=4.2e+02 Score=22.36 Aligned_cols=69 Identities=14% Similarity=0.215 Sum_probs=37.8
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEeeCCCcE-----------EEEECCe--EEEEeccCCCCC--CcccCCCCchhhhHH
Q psy6977 140 LHAIALKISNLPKQNPNRERITIITQGDKPI-----------ILSQNGK--TTEFPVQRLPAE--SVVDTNGAGDSFVGG 204 (239)
Q Consensus 140 ~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~-----------~~~~~~~--~~~~~~~~~~~~--~vvdt~GaGDaf~ag 204 (239)
.+..++.+..+ |.+..+|-+|.+|. +...+++ .+.+.+..+... +..+--|..-.-.+.
T Consensus 202 ~~~~A~~l~~L------G~~ralvV~G~~GlDE~~~~~~t~v~~l~~g~i~~~~l~pe~~Gl~~~~~~~l~~~~~~ena~ 275 (338)
T COG0547 202 VELLAEALRLL------GVERALVVHGLEGLDEVTPTGTTLVAELKDGEIREYTLTPEDFGLERAPLEDLPGGDPEENAE 275 (338)
T ss_pred HHHHHHHHHHh------CcceEEEEECCCCcccccCCCCceEEEEcCCceEEEEeCHHhcCCCCCchhhcCCCCHHHHHH
Confidence 34455666665 87788887898773 2333433 334444443211 122334443444567
Q ss_pred HHHHHHcCCC
Q psy6977 205 FLSQLIKGEP 214 (239)
Q Consensus 205 ~~~~l~~g~~ 214 (239)
++-..++|..
T Consensus 276 ~~~~vL~G~~ 285 (338)
T COG0547 276 ILRAVLAGEE 285 (338)
T ss_pred HHHHHHCCCC
Confidence 7778888844
No 119
>PF11469 Ribonucleas_3_2: Ribonuclease III; InterPro: IPR021568 This archaeal family of proteins has no known function. ; PDB: 1ZTD_A.
Probab=25.02 E-value=88 Score=21.23 Aligned_cols=31 Identities=19% Similarity=0.258 Sum_probs=25.1
Q ss_pred cccCCCCchhhhHHHHHHHHcC-CCHHHHHHH
Q psy6977 191 VVDTNGAGDSFVGGFLSQLIKG-EPLSVCIEC 221 (239)
Q Consensus 191 vvdt~GaGDaf~ag~~~~l~~g-~~~~~a~~~ 221 (239)
-.|-.|-||..=|-+.|+++.| .+.+||++.
T Consensus 52 R~dkh~kGd~aEA~iAyAWLeg~it~eEavei 83 (120)
T PF11469_consen 52 RTDKHGKGDIAEALIAYAWLEGKITIEEAVEI 83 (120)
T ss_dssp CGGCCGHHHHHHHHHHHHHHTTSS-HHHHHHH
T ss_pred cccccCccHHHHHHHHHHHHhccccHHHHHHH
Confidence 3467899999999999999988 478888764
No 120
>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional
Probab=25.01 E-value=2.8e+02 Score=23.24 Aligned_cols=78 Identities=9% Similarity=-0.032 Sum_probs=45.4
Q ss_pred CchHHHHHHHHHhcCCeeeEEecC--C-CCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEEEEe
Q psy6977 7 DNYSDILESKASEFGLVVKYQHHD--T-EPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYYYVS 83 (239)
Q Consensus 7 D~~g~~i~~~l~~~gI~~~~v~~~--~-~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~ 83 (239)
..-|+.+++.|++.+..++.+..- . ...+.... . ++ ..+.-+.++. ..+++.|+++|.
T Consensus 12 g~VG~~~l~~Leer~fpv~~l~l~~s~~~s~gk~i~-f---~g-----------~~~~V~~l~~----~~f~~vDia~fa 72 (322)
T PRK06901 12 FELSEKLLEALEQSDLEIEQISIVEIEPFGEEQGIR-F---NN-----------KAVEQIAPEE----VEWADFNYVFFA 72 (322)
T ss_pred cHHHHHHHHHHHhcCCchhheeecccccccCCCEEE-E---CC-----------EEEEEEECCc----cCcccCCEEEEc
Confidence 456999999999999988755531 1 12222111 1 11 1222222322 344678998883
Q ss_pred ccccccChHHHHHHHHHhhhCC--CCCh
Q psy6977 84 GFFLTVSPESILEVAKVALSCT--IRNI 109 (239)
Q Consensus 84 g~~~~~~~~~~~~~~~~~~~~g--~~~~ 109 (239)
| .+...++...+.+.| ++|.
T Consensus 73 g------~~~s~~~ap~a~~aG~~VIDn 94 (322)
T PRK06901 73 G------KMAQAEHLAQAAEAGCIVIDL 94 (322)
T ss_pred C------HHHHHHHHHHHHHCCCEEEEC
Confidence 2 356667777888888 5555
No 121
>PF02885 Glycos_trans_3N: Glycosyl transferase family, helical bundle domain Prosite entry for Thymidine and pyrimidine-nucleoside phosphorylases; InterPro: IPR017459 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. The glycosyl transferase family includes anthranilate phosphoribosyltransferase (TrpD, 2.4.2.18 from EC) and thymidine phosphorylase (2.4.2.2 from EC). All these proteins can transfer a phosphorylated ribose substrate. Thymidine phosphorylase (2.4.2.2 from EC) catalyses the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate. This enzyme regulates the availability of thymidine and is therefore essential to nucleic acid metabolism. This N-terminal domain is found in various family 3 glycosyl transferases, including anthranilate phosphoribosyltransferase (TrpD, 2.4.2.18 from EC) and thymidine phosphorylase (2.4.2.2 from EC). All these proteins can transfer a phosphorylated ribose substrate. Thymidine phosphorylase catalyses the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate. This enzyme regulates the availability of thymidine and is therefore essential to nucleic acid metabolism.; PDB: 2DSJ_B 2ELC_B 2BPQ_A 1ZVW_B 3QR9_B 1V8G_B 2WK5_C 2J0F_C 2WK6_B 1UOU_A ....
Probab=23.91 E-value=1.4e+02 Score=18.03 Aligned_cols=28 Identities=25% Similarity=0.298 Sum_probs=18.9
Q ss_pred CchhhhHHHHHHH-HcCCCHHHHHHHHHH
Q psy6977 197 AGDSFVGGFLSQL-IKGEPLSVCIECGVW 224 (239)
Q Consensus 197 aGDaf~ag~~~~l-~~g~~~~~a~~~a~~ 224 (239)
.-|.=+|+|+.++ .+|.+.+|...++-+
T Consensus 32 ~s~~qiaAfL~al~~kget~~Eiag~~~a 60 (66)
T PF02885_consen 32 VSDAQIAAFLMALRMKGETPEEIAGFAKA 60 (66)
T ss_dssp S-HHHHHHHHHHHHHH---HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcCHHHHHHHHHH
Confidence 4588899999998 589999997666544
No 122
>PF07283 TrbH: Conjugal transfer protein TrbH; InterPro: IPR010837 This entry represents TrbH, a bacterial conjugal transfer protein approximately 150 residues long. TrbH contains a putative membrane lipoprotein lipid attachment site [].
Probab=23.16 E-value=2.1e+02 Score=20.05 Aligned_cols=24 Identities=21% Similarity=0.264 Sum_probs=20.0
Q ss_pred cCCchHHHHHHHHHhcCCeeeEEe
Q psy6977 5 GKDNYSDILESKASEFGLVVKYQH 28 (239)
Q Consensus 5 G~D~~g~~i~~~l~~~gI~~~~v~ 28 (239)
..|+||..|.+.|+.+|--+.--.
T Consensus 33 ~~d~Fg~aL~~~LR~~GYaV~e~~ 56 (121)
T PF07283_consen 33 DPDPFGQALENALRAKGYAVIEDD 56 (121)
T ss_pred CCChHHHHHHHHHHhcCcEEEecC
Confidence 478999999999999997765444
No 123
>KOG1301|consensus
Probab=22.36 E-value=83 Score=28.10 Aligned_cols=81 Identities=19% Similarity=0.286 Sum_probs=43.6
Q ss_pred cccChHHHHHHHHHhhhCC-CCCh-hhHHHHhhHH----------hcCHHHHHHHHHHcCCCccCHHHHHHHHhcCCCCC
Q psy6977 87 LTVSPESILEVAKVALSCT-IRNI-NYLHHRFIYL----------VLIDFEALAFAKQQNFQTEDLHAIALKISNLPKQN 154 (239)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~g-~~~~-p~~~~~~~~~----------~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~ 154 (239)
..+++..++.+...+-..| +... .-+.+++.++ ..|.. ..+ ..++..+..+....+.+..
T Consensus 118 Ssi~R~~LE~lA~~a~~~g~v~~I~kVyDQYlnFI~LEddlFsL~~~~~~--~~~-n~p~t~e~ei~~~~~~Ivd----- 189 (621)
T KOG1301|consen 118 SSISRSLLEDLASAASETGAVLQIHKVYDQYLNFIVLEDDLFSLGMQNSF--HAI-NRPSTTEEEINALMDRIVD----- 189 (621)
T ss_pred ccccHHHHHHHHHHHhhcchHHHHHHHHHhHhhheeecchhhhhcccccc--hhc-cCCCchHHHHHHHHHHHHH-----
Confidence 4577888889988888777 3333 3333343333 11111 011 1111112223334444443
Q ss_pred CCCceEEEEeeCCCcEEEEECCe
Q psy6977 155 PNRERITIITQGDKPIILSQNGK 177 (239)
Q Consensus 155 ~~g~~~vvvt~G~~G~~~~~~~~ 177 (239)
|.=.|++|+|.-+.+-+.+|.
T Consensus 190 --gLF~v~vTlG~VPiIRcp~g~ 210 (621)
T KOG1301|consen 190 --GLFSVFVTLGEVPIIRCPKGG 210 (621)
T ss_pred --HHHHHheecccceeEECCCCC
Confidence 777889999998888776664
No 124
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=22.30 E-value=1.8e+02 Score=21.26 Aligned_cols=86 Identities=10% Similarity=0.059 Sum_probs=50.8
Q ss_pred ccc-CCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEEE
Q psy6977 3 AVG-KDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYYY 81 (239)
Q Consensus 3 ~vG-~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~ 81 (239)
.+| +...|..+.+.|.+.|.++..+.+...+... . .+...+..+ ...+ ....+.++++|.++
T Consensus 3 V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~------~-~~~~~~~~d-----~~d~-----~~~~~al~~~d~vi 65 (183)
T PF13460_consen 3 VFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED------S-PGVEIIQGD-----LFDP-----DSVKAALKGADAVI 65 (183)
T ss_dssp EETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH------C-TTEEEEESC-----TTCH-----HHHHHHHTTSSEEE
T ss_pred EECCCChHHHHHHHHHHHCCCEEEEEecCchhccc------c-cccccceee-----ehhh-----hhhhhhhhhcchhh
Confidence 345 5778999999999999988888775432221 1 211111111 1111 12336777899888
Q ss_pred EeccccccChHHHHHHHHHhhhCC
Q psy6977 82 VSGFFLTVSPESILEVAKVALSCT 105 (239)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~g 105 (239)
.......-..+....+++.+++.|
T Consensus 66 ~~~~~~~~~~~~~~~~~~a~~~~~ 89 (183)
T PF13460_consen 66 HAAGPPPKDVDAAKNIIEAAKKAG 89 (183)
T ss_dssp ECCHSTTTHHHHHHHHHHHHHHTT
T ss_pred hhhhhhcccccccccccccccccc
Confidence 853211122456778888888777
No 125
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=21.89 E-value=2.6e+02 Score=22.49 Aligned_cols=35 Identities=6% Similarity=0.141 Sum_probs=28.3
Q ss_pred cccCCCCchhhhHHHHHHHHc------CCCHHHHHHHHHHH
Q psy6977 191 VVDTNGAGDSFVGGFLSQLIK------GEPLSVCIECGVWA 225 (239)
Q Consensus 191 vvdt~GaGDaf~ag~~~~l~~------g~~~~~a~~~a~~~ 225 (239)
+.--+|+|-+|++-|+-++.+ |.+-++|.+++...
T Consensus 168 ~tal~gsgPA~~~~~~~al~~a~~~~ggl~~~~a~~l~~~~ 208 (277)
T PRK06928 168 ASNLTSSSPGFIAAIFEEFAEAAVRNSSLSDEEAFQFLNFA 208 (277)
T ss_pred eeeeecCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 444589999999999999876 58888888877653
No 126
>PRK12333 nucleoside triphosphate pyrophosphohydrolase; Reviewed
Probab=21.55 E-value=1.4e+02 Score=23.15 Aligned_cols=29 Identities=7% Similarity=0.012 Sum_probs=26.4
Q ss_pred CCchhhhHHHHHHHHcCCCHHHHHHHHHH
Q psy6977 196 GAGDSFVGGFLSQLIKGEPLSVCIECGVW 224 (239)
Q Consensus 196 GaGDaf~ag~~~~l~~g~~~~~a~~~a~~ 224 (239)
--||.+++-.-.+...|.++++|++.++.
T Consensus 165 E~GDlLFalvn~aR~~~idpE~ALr~an~ 193 (204)
T PRK12333 165 GVAEALWAVVAWARAEGIDPEIALRERTE 193 (204)
T ss_pred cHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 57999999999999999999999998875
No 127
>COG1854 LuxS LuxS protein involved in autoinducer AI2 synthesis [Signal transduction mechanisms]
Probab=21.41 E-value=1.1e+02 Score=22.39 Aligned_cols=35 Identities=11% Similarity=0.024 Sum_probs=21.7
Q ss_pred HHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCC
Q psy6977 11 DILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGK 46 (239)
Q Consensus 11 ~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~ 46 (239)
.++|+++... +++-.+..-+++||+|.+++...+.
T Consensus 62 ~~iRnh~~g~-~~iID~SPMGCrTGFYm~l~G~~~~ 96 (161)
T COG1854 62 GFIRNHLNGN-VEIIDISPMGCRTGFYMILIGTPTS 96 (161)
T ss_pred HHHHhcccCc-eeEEEecCcccccceEEEEECCCCH
Confidence 3445554443 4444444458899999999876443
No 128
>PRK09562 mazG nucleoside triphosphate pyrophosphohydrolase; Reviewed
Probab=20.98 E-value=1.3e+02 Score=24.28 Aligned_cols=29 Identities=10% Similarity=-0.119 Sum_probs=25.9
Q ss_pred CCchhhhHHHHHHHHcCCCHHHHHHHHHH
Q psy6977 196 GAGDSFVGGFLSQLIKGEPLSVCIECGVW 224 (239)
Q Consensus 196 GaGDaf~ag~~~~l~~g~~~~~a~~~a~~ 224 (239)
-.||.+++-+.++...|.+++++++.++.
T Consensus 193 ElGDlLf~lv~lAr~~~id~E~aL~~a~~ 221 (262)
T PRK09562 193 EFGDLLFALVNLARHLGIDPEAALRKANA 221 (262)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 46999999999999999999999987764
No 129
>PF12854 PPR_1: PPR repeat
Probab=20.83 E-value=1.4e+02 Score=15.22 Aligned_cols=20 Identities=10% Similarity=0.125 Sum_probs=16.6
Q ss_pred hHHHHHHHHcCCCHHHHHHH
Q psy6977 202 VGGFLSQLIKGEPLSVCIEC 221 (239)
Q Consensus 202 ~ag~~~~l~~g~~~~~a~~~ 221 (239)
...++.++++...+++|.++
T Consensus 10 y~~lI~~~Ck~G~~~~A~~l 29 (34)
T PF12854_consen 10 YNTLIDGYCKAGRVDEAFEL 29 (34)
T ss_pred HHHHHHHHHHCCCHHHHHHH
Confidence 45688999999999998875
No 130
>TIGR00112 proC pyrroline-5-carboxylate reductase. This enzyme catalyzes the final step in proline biosynthesis. Among the four paralogs in Bacillus subtilis (proG, proH, proI, and comER), ComER is the most divergent and does not prevent proline auxotrophy from mutation of the other three. It is excluded from the seed and scores between the trusted and noise cutoffs.
Probab=20.68 E-value=2.7e+02 Score=21.92 Aligned_cols=36 Identities=25% Similarity=0.427 Sum_probs=28.4
Q ss_pred cccCCCCchhhhHHHHHHHH-----cCCCHHHHHHHHHHHH
Q psy6977 191 VVDTNGAGDSFVGGFLSQLI-----KGEPLSVCIECGVWAA 226 (239)
Q Consensus 191 vvdt~GaGDaf~ag~~~~l~-----~g~~~~~a~~~a~~~a 226 (239)
...-+|+|-+|+..|+-++. .|.+.++|.+++..+.
T Consensus 148 ~talsgsgPA~~~~~~~al~~~~v~~Gl~~~~A~~lv~~~~ 188 (245)
T TIGR00112 148 VTALSGSGPAYVFLFIEALADAGVKQGLPRELALELAAQTV 188 (245)
T ss_pred HHhhccCcHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 44458999999999996664 5889999988876643
No 131
>cd04929 ACT_TPH ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes. ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes. TPH catalyses the hydroxylation of L-Trp to 5-hydroxytryptophan, the rate limiting step in the biosynthesis of 5-hydroxytryptamine (serotonin) and the first reaction in the synthesis of melatonin. Very little is known about the role of the ACT domain in TPH, which appears to be regulated by phosphorylation but not by its substrate or cofactor. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=20.48 E-value=2.3e+02 Score=17.68 Aligned_cols=31 Identities=10% Similarity=0.130 Sum_probs=21.2
Q ss_pred HHHHHHHhcCCeeeEEe-cCC-CCceeEEEEEe
Q psy6977 12 ILESKASEFGLVVKYQH-HDT-EPTGTCAVLIT 42 (239)
Q Consensus 12 ~i~~~l~~~gI~~~~v~-~~~-~~t~~~~~~~~ 42 (239)
.+++.++..||++..+. ++. .....+..+++
T Consensus 16 ~iL~~f~~~~inl~~IeSRP~~~~~~~y~F~id 48 (74)
T cd04929 16 KALKLFQELGINVVHIESRKSKRRSSEFEIFVD 48 (74)
T ss_pred HHHHHHHHCCCCEEEEEeccCCCCCceEEEEEE
Confidence 37889999999999998 443 23344454454
No 132
>PF10627 CsgE: Curli assembly protein CsgE; InterPro: IPR018900 Curli are a class highly aggregated surface fibres that are part of a complex extracellular matrix. They promote biofilm formation in addition to other activities. CsgE is a non-structural protein involved in curli biogenesis []. CsgE forms an outer membrane complex with the curli assembly proteins CsgG and CsgF [].
Probab=20.43 E-value=75 Score=21.74 Aligned_cols=25 Identities=12% Similarity=0.331 Sum_probs=17.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKY 26 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~ 26 (239)
+|++|.| |.+.+-+.+++..++...
T Consensus 11 ~Tr~G~D-FY~~Fs~~~~~~~~~~~~ 35 (107)
T PF10627_consen 11 ITRFGHD-FYRYFSQKWRDIPITSGF 35 (107)
T ss_pred cccchHH-HHHHHHHHHhhcCCCCCc
Confidence 5789999 667777777766655543
Done!