Query psy6977
Match_columns 239
No_of_seqs 126 out of 1198
Neff 10.0
Searched_HMMs 29240
Date Fri Aug 16 23:38:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6977.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6977hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3loo_A Anopheles gambiae adeno 100.0 2.7E-41 9.2E-46 282.3 19.5 236 1-238 103-356 (365)
2 3otx_A Adenosine kinase, putat 100.0 5E-41 1.7E-45 279.0 20.1 236 1-238 89-340 (347)
3 3vas_A Putative adenosine kina 100.0 1.1E-40 3.8E-45 278.9 18.2 236 1-238 104-359 (370)
4 3uq6_A Adenosine kinase, putat 100.0 8.9E-40 3E-44 273.7 17.6 236 1-238 106-361 (372)
5 1bx4_A Protein (adenosine kina 100.0 2.8E-38 9.6E-43 262.3 20.6 236 1-238 87-339 (345)
6 4e3a_A Sugar kinase protein; s 100.0 1.1E-37 3.8E-42 259.2 17.9 219 1-238 100-339 (352)
7 2abs_A Adenosine kinase, AK; r 100.0 2.1E-36 7.1E-41 254.3 19.1 232 1-238 111-377 (383)
8 3h49_A Ribokinase; transferase 100.0 4.5E-36 1.6E-40 247.1 19.1 219 1-237 63-300 (325)
9 3ry7_A Ribokinase; transferase 100.0 4.5E-37 1.5E-41 250.8 12.3 222 1-237 60-293 (304)
10 4du5_A PFKB; structural genomi 100.0 8.2E-36 2.8E-40 246.6 17.6 219 1-236 78-322 (336)
11 3ljs_A Fructokinase; fructokia 100.0 2.1E-36 7.3E-41 250.3 13.6 220 1-237 56-314 (338)
12 3lhx_A Ketodeoxygluconokinase; 100.0 1.6E-36 5.5E-41 249.2 12.3 224 1-238 53-305 (319)
13 3iq0_A Putative ribokinase II; 100.0 2.9E-36 9.8E-41 248.8 13.6 218 1-237 57-298 (330)
14 2rbc_A Sugar kinase, AGR_C_456 100.0 1.4E-35 4.9E-40 245.6 16.7 213 1-236 86-313 (343)
15 4e69_A 2-dehydro-3-deoxyglucon 100.0 1.1E-35 3.7E-40 245.1 15.6 218 1-238 72-318 (328)
16 1rkd_A Ribokinase; carbohydrat 100.0 1.1E-35 3.7E-40 243.1 15.4 221 1-236 61-292 (309)
17 3umo_A 6-phosphofructokinase i 100.0 1.3E-35 4.3E-40 242.8 14.9 225 1-238 58-295 (309)
18 3pl2_A Sugar kinase, ribokinas 100.0 1.7E-35 5.8E-40 243.0 15.3 217 1-236 61-302 (319)
19 4e84_A D-beta-D-heptose 7-phos 100.0 3.6E-36 1.2E-40 249.9 10.0 225 1-238 113-345 (352)
20 3ktn_A Carbohydrate kinase, PF 100.0 8.9E-36 3E-40 247.3 12.0 225 1-237 54-318 (346)
21 3kzh_A Probable sugar kinase; 100.0 1.8E-35 6.3E-40 243.7 13.3 221 1-238 62-296 (328)
22 2fv7_A Ribokinase; structural 100.0 1.5E-35 5.2E-40 244.5 12.5 222 1-237 81-318 (331)
23 2dcn_A Hypothetical fructokina 100.0 4.1E-35 1.4E-39 239.9 14.8 216 1-237 53-294 (311)
24 3hj6_A Fructokinase, FRK; fruc 100.0 1.5E-36 5.2E-41 250.1 5.9 217 1-237 74-313 (327)
25 2v78_A Fructokinase; transfera 100.0 6E-35 2E-39 239.2 15.0 217 1-237 53-296 (313)
26 2qcv_A Putative 5-dehydro-2-de 100.0 4.1E-34 1.4E-38 236.0 19.0 221 1-237 64-311 (332)
27 2nwh_A AGR_C_3442P, carbohydra 100.0 9.4E-35 3.2E-39 238.4 14.9 222 1-238 59-294 (317)
28 3ikh_A Carbohydrate kinase; tr 100.0 4.7E-35 1.6E-39 238.3 12.6 204 1-237 59-274 (299)
29 1v1a_A 2-keto-3-deoxygluconate 100.0 2.9E-34 9.8E-39 234.8 16.9 212 1-237 53-289 (309)
30 2jg1_A Tagatose-6-phosphate ki 100.0 1.4E-34 4.9E-39 238.6 14.0 223 1-238 76-313 (330)
31 1vm7_A Ribokinase; TM0960, str 100.0 1.3E-33 4.4E-38 231.1 18.5 213 1-236 72-295 (311)
32 3cqd_A 6-phosphofructokinase i 100.0 3.7E-34 1.3E-38 234.1 13.9 223 1-238 58-295 (309)
33 2hlz_A Ketohexokinase; non-pro 100.0 7.5E-34 2.6E-38 232.5 14.8 215 1-236 74-309 (312)
34 2c4e_A Sugar kinase MJ0406; tr 100.0 2.3E-33 7.7E-38 228.7 17.1 208 1-237 62-285 (302)
35 2f02_A Tagatose-6-phosphate ki 100.0 1.1E-33 3.7E-38 232.7 14.3 223 1-238 58-296 (323)
36 3ie7_A LIN2199 protein; phosph 100.0 7.6E-34 2.6E-38 233.3 13.1 219 1-238 59-292 (320)
37 2qhp_A Fructokinase; NP_810670 100.0 3.4E-33 1.2E-37 227.0 16.5 223 1-238 44-286 (296)
38 3go6_A Ribokinase RBSK; phosph 100.0 1.7E-33 5.7E-38 230.2 14.0 198 1-237 76-290 (310)
39 1tyy_A Putative sugar kinase; 100.0 2.1E-34 7.2E-39 238.4 8.8 216 1-237 70-315 (339)
40 2afb_A 2-keto-3-deoxygluconate 100.0 5.5E-33 1.9E-37 230.9 15.5 224 1-236 64-329 (351)
41 2ajr_A Sugar kinase, PFKB fami 100.0 5.1E-34 1.7E-38 235.4 8.8 223 1-238 71-313 (331)
42 4gm6_A PFKB family carbohydrat 100.0 1.1E-33 3.7E-38 235.2 10.6 231 1-238 76-332 (351)
43 2abq_A Fructose 1-phosphate ki 100.0 1E-32 3.4E-37 225.3 14.5 217 1-233 56-283 (306)
44 3b1n_A Ribokinase, putative; r 100.0 1.7E-31 5.9E-36 219.8 19.8 208 1-237 67-291 (326)
45 2jg5_A Fructose 1-phosphate ki 100.0 2.3E-32 7.8E-37 223.1 13.7 218 1-234 56-284 (306)
46 3ewm_A Uncharacterized sugar k 100.0 6.1E-32 2.1E-36 221.3 15.4 207 1-236 53-286 (313)
47 2pkf_A Adenosine kinase; trans 100.0 7.9E-32 2.7E-36 222.5 14.2 212 1-237 77-305 (334)
48 3kd6_A Carbohydrate kinase, PF 100.0 3.1E-30 1.1E-34 211.2 17.4 212 1-237 49-282 (313)
49 3bf5_A Ribokinase related prot 100.0 4.6E-30 1.6E-34 209.5 17.8 195 1-237 76-286 (306)
50 1vk4_A PFKB carbohydrate kinas 100.0 2.3E-31 7.8E-36 216.5 9.4 206 1-238 56-286 (298)
51 2yxt_A Pyridoxal kinase; beta 99.9 2.7E-24 9.2E-29 175.8 10.1 201 1-232 16-269 (312)
52 2ddm_A Pyridoxine kinase; pyri 99.9 3.4E-23 1.2E-27 167.1 13.5 206 1-234 27-268 (283)
53 1jxh_A Phosphomethylpyrimidine 99.8 1.5E-19 5.2E-24 146.0 11.0 146 76-233 94-269 (288)
54 1ub0_A THID, phosphomethylpyri 99.8 6.1E-19 2.1E-23 140.2 13.5 146 76-233 70-244 (258)
55 3pzs_A PM kinase, pyridoxamine 99.8 4.2E-18 1.4E-22 137.5 13.0 149 74-232 75-259 (289)
56 2i5b_A Phosphomethylpyrimidine 99.8 6.1E-18 2.1E-22 135.4 13.3 146 76-233 74-250 (271)
57 3h74_A Pyridoxal kinase; PSI-I 99.7 1.5E-16 5.1E-21 127.8 14.4 145 76-232 74-248 (282)
58 3mbh_A Putative phosphomethylp 99.7 3.3E-16 1.1E-20 126.4 13.5 146 76-232 77-258 (291)
59 3zs7_A Pyridoxal kinase; trans 99.7 1E-15 3.5E-20 123.9 12.3 146 75-232 75-261 (300)
60 1ekq_A Hydroxyethylthiazole ki 99.5 8E-14 2.7E-18 111.3 9.0 156 55-224 40-223 (272)
61 3rm5_A Hydroxymethylpyrimidine 99.4 3.7E-12 1.3E-16 111.1 11.6 143 76-231 91-274 (550)
62 1v8a_A Hydroxyethylthiazole ki 98.9 1.4E-08 4.9E-13 80.4 11.2 140 71-225 51-220 (265)
63 2r3b_A YJEF-related protein; p 98.5 8.7E-07 3E-11 71.6 10.1 140 72-230 107-266 (310)
64 3bgk_A SMU.573, putative uncha 98.4 5.7E-07 1.9E-11 72.8 7.0 143 72-230 121-283 (311)
65 3rpz_A ADP/ATP-dependent NAD(P 98.4 1.1E-06 3.8E-11 69.9 7.7 139 72-224 94-244 (279)
66 3rss_A Putative uncharacterize 98.3 3.4E-06 1.1E-10 72.5 11.0 142 72-229 316-473 (502)
67 3dzv_A 4-methyl-5-(beta-hydrox 98.3 1E-05 3.5E-10 64.0 11.7 145 69-225 51-229 (273)
68 3hpd_A Hydroxyethylthiazole ki 97.1 0.0064 2.2E-07 47.7 11.0 139 72-224 52-219 (265)
69 3nl6_A Thiamine biosynthetic b 96.9 0.013 4.5E-07 50.8 12.3 145 69-224 298-494 (540)
70 3k5w_A Carbohydrate kinase; 11 96.4 0.014 4.9E-07 49.7 9.0 136 74-225 290-441 (475)
71 3drw_A ADP-specific phosphofru 96.3 0.15 5.3E-06 43.1 14.3 31 178-210 436-467 (474)
72 1l2l_A ADP-dependent glucokina 80.2 1.5 5.3E-05 37.0 3.9 31 178-210 424-455 (457)
73 1ua4_A Glucokinase, ADP-depend 77.0 2.1 7.3E-05 36.1 3.9 32 178-211 421-453 (455)
74 1gc5_A ADP-dependent glucokina 75.5 2 6.9E-05 36.3 3.3 22 189-210 441-463 (467)
75 2wgo_A Ranaspumin-2, RSN-2; cy 36.2 29 0.001 20.8 2.6 46 6-51 20-72 (98)
76 1ua4_A Glucokinase, ADP-depend 34.3 2.1E+02 0.0071 24.1 8.6 61 72-132 221-302 (455)
77 1j6w_A Autoinducer-2 productio 32.5 65 0.0022 23.2 4.3 34 10-43 61-94 (175)
78 1l2l_A ADP-dependent glucokina 28.7 1.3E+02 0.0046 25.2 6.4 86 45-132 197-305 (457)
79 2raf_A Putative dinucleotide-b 28.7 1.3E+02 0.0046 21.7 5.9 27 1-27 22-48 (209)
80 1ztd_A Hypothetical protein PF 26.8 60 0.0021 21.3 3.1 30 192-221 64-94 (133)
81 1bts_A BAND 3 anion transport 23.0 51 0.0018 15.5 1.7 15 201-215 11-25 (26)
82 1vmg_A Hypothetical protein SS 22.0 80 0.0027 20.1 3.0 26 197-222 67-92 (95)
83 2q5z_A MAZG, hypothetical prot 22.0 97 0.0033 20.3 3.6 28 197-224 79-106 (114)
84 2gta_A Hypothetical protein YP 21.7 88 0.003 20.6 3.3 28 197-224 67-94 (119)
85 3cra_A Protein MAZG; tandem-re 21.1 88 0.003 24.2 3.6 28 197-224 196-223 (265)
86 2pv7_A T-protein [includes: ch 21.0 1.4E+02 0.0048 23.1 4.9 27 1-27 24-51 (298)
87 2l82_A Designed protein OR32; 20.6 1.3E+02 0.0043 19.7 3.7 34 69-105 70-103 (162)
No 1
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=100.00 E-value=2.7e-41 Score=282.35 Aligned_cols=236 Identities=53% Similarity=0.882 Sum_probs=199.3
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|+||+|.+|+.+++.|+++||+++++.+.+.+|++++++++ +++|+++.+.+++..+++++++....++.+++++++
T Consensus 103 ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~Tg~~~i~~~--~~~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~v 180 (365)
T 3loo_A 103 FGCVGQDEYARILEERATSNGVNVQYQRSATSPTGTCAVLVT--GTQRSLCANLAAANDFTPEHLRSDGNRAYLQGAQFF 180 (365)
T ss_dssp EEEEESBHHHHHHHHHHHHHTCEEEEEEESSSCCEEEEEEEE--TTEEEEEEECGGGGGCCGGGGGSHHHHHHHHHCSEE
T ss_pred EEEecCCchHHHHHHHHHHCCCceeccccCCCCCeEEEEEEE--CCceEEEeccchHhhCCHhHcCchhhHHHHhhCCEE
Confidence 578999999999999999999999999886679999998887 678888888888889998888754445778899999
Q ss_pred EEeccccccChHHHHHHHHHhhhCC---CCCh--hh--------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHH
Q psy6977 81 YVSGFFLTVSPESILEVAKVALSCT---IRNI--NY--------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIA 144 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~--p~--------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~ 144 (239)
|++|+.+.++++.+.++++.+++.| ++|+ |. +.++++++ ++|++|++.|++....+.+++++++
T Consensus 181 ~i~G~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~ 260 (365)
T 3loo_A 181 YVSGFFFTVSFESALSVAKEAAATGRMFMMNLSAPFVPQFYKNNLEEIFPYVDVLFGNETEAIALAKEFNYGTEDLREIG 260 (365)
T ss_dssp EEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCSTHHHHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHHHH
T ss_pred EEeeeeccCCHHHHHHHHHHHHHcCCEEEEECCchhhhHHHHHHHHHHHHhCCEEecCHHHHHHHhcccCCCCCCHHHHH
Confidence 9999988777889999999999988 6666 43 23566665 9999999999998666778899999
Q ss_pred HHHhcCCCCCCCCceEEEEeeCCCcEEEE--ECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHH
Q psy6977 145 LKISNLPKQNPNRERITIITQGDKPIILS--QNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECG 222 (239)
Q Consensus 145 ~~l~~~~~~~~~g~~~vvvt~G~~G~~~~--~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a 222 (239)
+.+.++......|++.||||+|++|++++ ++++.+++|+++++..+++||+||||+|+|||++++++|+++++|+++|
T Consensus 261 ~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~agfl~~l~~g~~l~~a~~~a 340 (365)
T 3loo_A 261 KRIAALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVGGFLAQLLQSRTVDVCIKCG 340 (365)
T ss_dssp HHHHTSCCSSTTSCCEEEEEETTEEEEEEETTCSCCEEECCCCCC------CTTHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHhhhhhccCCCCEEEEEeCCCCEEEEEecCCeEEEEeccccCCCCccCCCChHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 99987532122388999999999999999 7777888998887444799999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCcCC
Q psy6977 223 VWAAQHIIQVSGCTLG 238 (239)
Q Consensus 223 ~~~a~~~~~~~G~~~~ 238 (239)
+++|+.++++.|+++|
T Consensus 341 ~~~Aa~~v~~~G~~~p 356 (365)
T 3loo_A 341 IWAAREIIQRSGCTFE 356 (365)
T ss_dssp HHHHHHHHHHGGGGGG
T ss_pred HHHHHHHHcCCCCCCC
Confidence 9999999999999876
No 2
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=100.00 E-value=5e-41 Score=279.02 Aligned_cols=236 Identities=32% Similarity=0.572 Sum_probs=199.9
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|+||+|.+|+.+++.|+++||+++++...+.+|+.++++++ +++|+++.+.+++..+++++++....++.+++++++
T Consensus 89 ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~T~~~~i~~~--~g~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~ 166 (347)
T 3otx_A 89 VGCIADDRYGKVLKEAAEHEGIVMAVEHTTKAGSGACAVCIT--GKERTLVADLGAANHLSSEHMRSPAVVRAMDESRIF 166 (347)
T ss_dssp ECEECSSHHHHHHHHHHHHHTCEECCEECSSSCEEEEEEEEE--TTEEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSEE
T ss_pred EEEecCChHHHHHHHHHHHCCCceecccCCCCCCeEEEEEEE--CCceeeeechhhhhcCCHHHcCchhhHHHHhhCCEE
Confidence 588999999999999999999999998766779999998887 778888888888888888877754445788999999
Q ss_pred EEeccccccChHHHHHHHHHhhhCC---CCCh--hhH--------HHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHH
Q psy6977 81 YVSGFFLTVSPESILEVAKVALSCT---IRNI--NYL--------HHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIA 144 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~--p~~--------~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~ 144 (239)
|++|+.+.++++.+.++++.+++.| ++|+ |.+ .++++++ ++|++|++.|++....+.+++++++
T Consensus 167 ~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~~~dil~~N~~Ea~~l~~~~~~~~~~~~~~~ 246 (347)
T 3otx_A 167 YFSGFTLTVDVNHVLQACRKAREVDGLFMINLSAPFIMQFFSAQLGEVLPYTDIIVANRHEAKEFANMMKWDTDCVEEIA 246 (347)
T ss_dssp EEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHHTCCCCCHHHHH
T ss_pred EEeeeecccCHHHHHHHHHHHHHhCCEEEeeCchhhhHHHHHHHHHHHHhhCCEEecCHHHHHHHhcccCCCcCCHHHHH
Confidence 9999988888899999999999998 6666 432 2566665 9999999999997666668899999
Q ss_pred HHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHH
Q psy6977 145 LKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224 (239)
Q Consensus 145 ~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~ 224 (239)
+.+.++.+.+..|++.||||+|++|++++++++.+++++++++..+++||+||||+|+|||++++++|+++++|+++|++
T Consensus 247 ~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~l~~a~~~a~~ 326 (347)
T 3otx_A 247 RRAVSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGFLSAYAVGKDLRRCCETGHY 326 (347)
T ss_dssp HHHHHTSCCCCSSCCEEEEEETTEEEEEEETTEEEEECCCCCCGGGCCSSCCSHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HHHHhhhccccCCCCEEEEEeCCCCeEEEECCeEEEEEecccCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 99885331111489999999999999999999888999888754578999999999999999999999999999999999
Q ss_pred HHHHHHHhccCcCC
Q psy6977 225 AAQHIIQVSGCTLG 238 (239)
Q Consensus 225 ~a~~~~~~~G~~~~ 238 (239)
+|+.++++.|+++|
T Consensus 327 ~aa~~v~~~G~~~p 340 (347)
T 3otx_A 327 TAQEVIQRDGCSFP 340 (347)
T ss_dssp HHHHHHTCC----C
T ss_pred HHHHHHcccCCCCC
Confidence 99999999999876
No 3
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=100.00 E-value=1.1e-40 Score=278.94 Aligned_cols=236 Identities=32% Similarity=0.556 Sum_probs=203.7
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|.||+|.+|+.+++.|+++||+++++.+ .+.+|+.++++++ +++|+++.+.+++..+++++++..+..+.++++++
T Consensus 104 ig~vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~--~g~rt~~~~~ga~~~l~~~~~~~~~~~~~~~~~~~ 181 (370)
T 3vas_A 104 VGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS--EKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQV 181 (370)
T ss_dssp EEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC--SSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSE
T ss_pred EEEEcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEe--CCceeEEEccchhhhCCHHHcCchhhHHHHhhCCE
Confidence 57899999999999999999999999987 6679999999887 67888888888888898888775444567899999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh--hhH--------HHHhhHH---hcCHHHHHHHHHHcCCCccCHHHH
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI--NYL--------HHRFIYL---VLIDFEALAFAKQQNFQTEDLHAI 143 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~--p~~--------~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~ 143 (239)
+|++|+.+.++++.+.++++.+++.| ++|+ |.+ .++++++ ++|++|+..|++....+.++++++
T Consensus 182 v~~~g~~~~~~~~~~~~~~~~a~~~g~~v~ld~~~~~~~~~~~~~l~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~ 261 (370)
T 3vas_A 182 YYIAGFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHAT 261 (370)
T ss_dssp EEEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSSHHHHH
T ss_pred EEEEeeeccCCHHHHHHHHHHHHHcCCEEEEECCcHHHHHHHHHHHHHHHhhCCEEEcCHHHHHHHhcccCCCccCHHHH
Confidence 99999988877889999999999988 6676 432 3566655 999999999999866666789999
Q ss_pred HHHHhcCCCCCCC-CceEEEEeeCCCcEEEEE--CCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHH
Q psy6977 144 ALKISNLPKQNPN-RERITIITQGDKPIILSQ--NGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIE 220 (239)
Q Consensus 144 ~~~l~~~~~~~~~-g~~~vvvt~G~~G~~~~~--~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~ 220 (239)
++.+.++.+.+.. |++.||||+|++|+++++ +++.+++|+++++..+++||+||||+|+|||++++++|+++++|++
T Consensus 262 ~~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag~l~~l~~g~~l~~a~~ 341 (370)
T 3vas_A 262 ARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKPMITSLH 341 (370)
T ss_dssp HHHHHHSCCTTCCCCCCEEEEEETTEEEEEEETTCSSCEEECCCCCCTTTCSCCTTHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred HHHHHhhcccccccCCCEEEEecCCCceEEEEcCCCeEEEEecccccCCCcCCCCChHHHHHHHHHHHHHCCCCHHHHHH
Confidence 9999875321112 789999999999999999 7888899998875458999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCcCC
Q psy6977 221 CGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 221 ~a~~~a~~~~~~~G~~~~ 238 (239)
+|+++|+.++++.|+++|
T Consensus 342 ~A~aaAa~~v~~~G~~~p 359 (370)
T 3vas_A 342 AAVKAAAYIICRSGFSLG 359 (370)
T ss_dssp HHHHHHHHHHTSSSSCCC
T ss_pred HHHHHHHHHHcccCCcCC
Confidence 999999999999999887
No 4
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=100.00 E-value=8.9e-40 Score=273.75 Aligned_cols=236 Identities=32% Similarity=0.552 Sum_probs=197.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|.+|+++++.|++.||+++++... +.+|+.+.++++ +++|+++.+.+++..+++++++....+..++.+++
T Consensus 106 iG~VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~--dgert~~~~~ga~~~l~~~~i~~~~~~~~i~~a~~ 183 (372)
T 3uq6_A 106 VGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS--EKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQV 183 (372)
T ss_dssp EEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC--SSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSE
T ss_pred EeeecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEcC--CCceEEEEeccchhhcchhhhhhhhHHHHhhcccE
Confidence 478999999999999999999999998865 457888777665 78899888889999999988887666788999999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh--hhH--------HHHhhHH---hcCHHHHHHHHHHcCCCccCHHHH
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI--NYL--------HHRFIYL---VLIDFEALAFAKQQNFQTEDLHAI 143 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~--p~~--------~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~ 143 (239)
++++|+....+++.+.++++.+++.| .+|+ |+. .++++++ ++|++|+..|++......++.+++
T Consensus 184 ~~~~g~~~~~~~~~~~~~~~~a~~~g~~v~ldls~~~~~~~~~~~l~~ll~~~Dil~~Ne~Ea~~l~~~~~~~~~~~~~~ 263 (372)
T 3uq6_A 184 YYIAGFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHAT 263 (372)
T ss_dssp EEEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSSHHHHH
T ss_pred EEEecccccccHHHHHHHHHHHHHcCCeEeeccccchhhhhhHHHHHHHhhcCCcccCCHHHHHHHhCCCCCchhHHHHH
Confidence 99999887766788899999999998 5565 432 2556665 999999999999877677788888
Q ss_pred HHHHhcCCCC-CCCCceEEEEeeCCCcEEEEECCe--EEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHH
Q psy6977 144 ALKISNLPKQ-NPNRERITIITQGDKPIILSQNGK--TTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIE 220 (239)
Q Consensus 144 ~~~l~~~~~~-~~~g~~~vvvt~G~~G~~~~~~~~--~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~ 220 (239)
++.+.++... ...+++.||+|+|++|+++++++. ...++.++++..++||||||||+|+|||+++|++|+++++|++
T Consensus 264 a~~l~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtGAGDaF~agfl~~l~~g~~l~~a~~ 343 (372)
T 3uq6_A 264 ARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKPMITSLH 343 (372)
T ss_dssp HHHHHHSCCTTCCCCCCEEEEEETTEEEEEEESSCSSCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred HHHHhhhhhhhhcCCceEEEEcCCCCceEEecCCCceeeeeeccCCCCCceeCCCchHHHHHHHHHHHHHcCCCHHHHHH
Confidence 8887654221 124778999999999999998753 3455555554458999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCcCC
Q psy6977 221 CGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 221 ~a~~~a~~~~~~~G~~~~ 238 (239)
+|+.+|+.++++.|+++|
T Consensus 344 ~a~~aAa~vv~~~Ga~lp 361 (372)
T 3uq6_A 344 AAVKAAAYIICRSGFSLG 361 (372)
T ss_dssp HHHHHHHHHHTSSSSCCC
T ss_pred HHHHHHHHHHcCCCCCCC
Confidence 999999999999999876
No 5
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=100.00 E-value=2.8e-38 Score=262.29 Aligned_cols=236 Identities=44% Similarity=0.736 Sum_probs=197.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCC-CCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPD-HLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~-~i~~~~~~~~~~~~~~ 79 (239)
+|.||+|.+|+.+++.|+++||+++++...+.+|+.++++++ +++|+++.+.+++..++++ +++.....+.++++++
T Consensus 87 ig~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~T~~~~~~~~--~g~r~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 164 (345)
T 1bx4_A 87 FGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACIT--GDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARV 164 (345)
T ss_dssp EEEEESSHHHHHHHHHHHHTTCEEEEEEESSSCCCEEEEEEE--TTEEEEEEECGGGGGCCGGGTTTSHHHHHHHHHCSE
T ss_pred EEEeCCChhHHHHHHHHHHcCCceeeeecCCCCCceEEEEEc--CCceEeeeccchHhhcCcccccCcHHHHHHHhhCCE
Confidence 478999999999999999999999999866679999988886 5678777777888888888 7765334466789999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh--hhH--------HHHhhHH---hcCHHHHHHHHHHcCCCccCHHHH
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI--NYL--------HHRFIYL---VLIDFEALAFAKQQNFQTEDLHAI 143 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~--p~~--------~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~ 143 (239)
+|++|+.+.++.+.+..+++.+++.| ++|+ +.+ .++++++ ++|++|+..|++....+.++++++
T Consensus 165 v~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~ 244 (345)
T 1bx4_A 165 CYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEI 244 (345)
T ss_dssp EEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCSHHHHHHTHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHHH
T ss_pred EEEEEEeccCCHHHHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHHHHHHhccCCEEeCCHHHHHHHhcccCCCCCCHHHH
Confidence 99999988888899999999999888 6676 322 2466655 999999999999754556788899
Q ss_pred HHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHH
Q psy6977 144 ALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGV 223 (239)
Q Consensus 144 ~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~ 223 (239)
++.+.++......|++.||||+|++|++++++++.++++++++++.+++||+||||+|+|||++++++|+++++|+++|+
T Consensus 245 ~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaf~ag~~~~l~~g~~~~~a~~~A~ 324 (345)
T 1bx4_A 245 AKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGH 324 (345)
T ss_dssp HHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHhcccccccCCCEEEEEeCCCCeEEEECCeEEEEeccccCcCccccCCCcchHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 99888731000018899999999999999988888888887764447999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCcCC
Q psy6977 224 WAAQHIIQVSGCTLG 238 (239)
Q Consensus 224 ~~a~~~~~~~G~~~~ 238 (239)
++|+.++++.|+++|
T Consensus 325 ~~aa~~v~~~G~~~p 339 (345)
T 1bx4_A 325 YAASIIIRRTGCTFP 339 (345)
T ss_dssp HHHHHHTTSSSSCCC
T ss_pred HHHHHHHhccCCCCC
Confidence 999999999998865
No 6
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=100.00 E-value=1.1e-37 Score=259.17 Aligned_cols=219 Identities=23% Similarity=0.368 Sum_probs=190.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|.+|+.+++.|++.||+++++.+. +.+|+.+++++++ +++|+++.+.+++..+++++++. ..++++++
T Consensus 100 ig~vG~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~-~g~r~~~~~~ga~~~l~~~~~~~----~~~~~~~~ 174 (352)
T 4e3a_A 100 FGNVAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTE-DGERSMNTYLGACVELGPEDVEA----DVVADAKV 174 (352)
T ss_dssp ECCCCSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECT-TSCEEEEEECGGGGGCCGGGCCH----HHHHTEEE
T ss_pred EEEECCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcC-CCceEEEeccChhhcCChhhCCH----HHHhhCCE
Confidence 589999999999999999999999999864 5689999998886 77888887888888999888874 67889999
Q ss_pred EEEeccccc--cChHHHHHHHHHhhhCC---CCCh--hh--------HHHHhh--HH---hcCHHHHHHHHHHcCCCccC
Q psy6977 80 YYVSGFFLT--VSPESILEVAKVALSCT---IRNI--NY--------LHHRFI--YL---VLIDFEALAFAKQQNFQTED 139 (239)
Q Consensus 80 ~~~~g~~~~--~~~~~~~~~~~~~~~~g---~~~~--p~--------~~~~~~--~~---~~n~~E~~~l~~~~~~~~~~ 139 (239)
+|++|+... .+.+.+.++++.+++.| ++|+ |. +.++++ ++ ++|++|+..|++. ++
T Consensus 175 v~~~G~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~l~~ll~~~~~dil~~N~~Ea~~l~g~-----~~ 249 (352)
T 4e3a_A 175 TYFEGYLWDPPRAKEAILDCARIAHQHGREMSMTLSDSFCVDRYRGEFLDLMRSGKVDIVFANRQEALSLYQT-----DD 249 (352)
T ss_dssp EEEEGGGGSSSSHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHTTSCCEEEEEHHHHHHHTTC-----SC
T ss_pred EEEeeeecCCchHHHHHHHHHHHHHHcCCEEEEECCchhhHHHHHHHHHHHhcccCCcEEEeCHHHHHHHhCC-----CC
Confidence 999998642 44578899999999988 5555 32 236777 55 9999999999875 67
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHH
Q psy6977 140 LHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCI 219 (239)
Q Consensus 140 ~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~ 219 (239)
++++++.+.+ +++.||||+|++|++++++++.+++|+++++ +++||+||||+|+|||++++++|+++++|+
T Consensus 250 ~~~a~~~l~~-------~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~--~vvDttGAGDaF~agfl~~l~~g~~l~~a~ 320 (352)
T 4e3a_A 250 FEEALNRIAA-------DCKIAAVTMSENGAVILKGRERYYVNAIRIR--EVVDTTGAGDLFASGFLYGYTQGRSLEDCG 320 (352)
T ss_dssp HHHHHHHHHH-------HSSEEEEECGGGCEEEEETTEEEEECCCCCS--CCSCCTTHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHhc-------CCCEEEEEECCCceEEEECCEEEEECCccCC--CCcCCCChHHHHHHHHHHHHHcCCCHHHHH
Confidence 8888888775 6789999999999999999999999998872 489999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCcCC
Q psy6977 220 ECGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 220 ~~a~~~a~~~~~~~G~~~~ 238 (239)
++|+++|+.++++.|++++
T Consensus 321 ~~A~~aAa~~v~~~G~~~~ 339 (352)
T 4e3a_A 321 KLGCLAAGIVIQQIGPRPM 339 (352)
T ss_dssp HHHHHHHHHHTTSSSSSCS
T ss_pred HHHHHHHHHHHcCCCCCCC
Confidence 9999999999999999876
No 7
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=100.00 E-value=2.1e-36 Score=254.32 Aligned_cols=232 Identities=31% Similarity=0.483 Sum_probs=187.4
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.||+|.+|+.+++.|+++||+++++...+.+|+.++++++ +++|+++.+.+++..+++++ ...+.+.+++++
T Consensus 111 ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~T~~~~~~~~--~g~r~~~~~~~a~~~l~~~~----~~~~~l~~~~~v 184 (383)
T 2abs_A 111 MGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLIN--EKERTLCTHLGACGSFRLPE----DWTTFASGALIF 184 (383)
T ss_dssp EEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCCEEEEEEEE--TTEEEEEEECGGGGGCCCCT----THHHHTTTCCEE
T ss_pred EEEecCChhHHHHHHHHHHcCCceeeeecCCCCCeEEEEEEc--CCceeEeeccChhhhCChhh----hhHHHhhcCCEE
Confidence 478999999999999999999999999866669999998886 57787777777777787752 123668899999
Q ss_pred EEeccccccChHHHHHHHHHhhh-CC---CCCh--hhH--------HHHhhHH---hcCHHHHHHHHHHcCCC-------
Q psy6977 81 YVSGFFLTVSPESILEVAKVALS-CT---IRNI--NYL--------HHRFIYL---VLIDFEALAFAKQQNFQ------- 136 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~-~g---~~~~--p~~--------~~~~~~~---~~n~~E~~~l~~~~~~~------- 136 (239)
|++|+.+.++.+.+..+++.+++ .+ ++|+ +.+ .++++++ ++|++|++.|++.....
T Consensus 185 ~~~g~~~~~~~~~~~~~~~~a~~~~g~~v~~d~~~~~~~~~~~~~l~~ll~~~dil~pN~~Ea~~L~g~~~~~~~~~~~~ 264 (383)
T 2abs_A 185 YATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKTAL 264 (383)
T ss_dssp EEEGGGGTTCHHHHHHHHHHHHTSTTCEEEEECCCHHHHHHCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCC-------
T ss_pred EEeeecccCCHHHHHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHHHHHHhhCCEEeCCHHHHHHHhcccCccccccccc
Confidence 99998887888999999999998 77 6676 322 2456655 99999999999864222
Q ss_pred -----ccCHHHHHHHHhcCCCCCCC-CceEEEEeeCCCcEEEE-----ECCeEEEEeccCCCCCCcccCCCCchhhhHHH
Q psy6977 137 -----TEDLHAIALKISNLPKQNPN-RERITIITQGDKPIILS-----QNGKTTEFPVQRLPAESVVDTNGAGDSFVGGF 205 (239)
Q Consensus 137 -----~~~~~~~~~~l~~~~~~~~~-g~~~vvvt~G~~G~~~~-----~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~ 205 (239)
.++++++++.+.++...... |++.||||+|++|++++ .+++.+++++++++..+++||+||||+|+|||
T Consensus 265 s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag~ 344 (383)
T 2abs_A 265 STANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFVGGF 344 (383)
T ss_dssp ---CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGGGCCCCTTHHHHHHHHH
T ss_pred ccccccccHHHHHHHHHhccccccccCCCEEEEEcCCCCeEEEEeecCCCCeEEEecCccCCcCCcCcCCChHHHHHHHH
Confidence 34566777777652100002 68999999999999998 55667788887664447999999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhccCcCC
Q psy6977 206 LSQLIKGEPLSVCIECGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 206 ~~~l~~g~~~~~a~~~a~~~a~~~~~~~G~~~~ 238 (239)
+++|++|+++++|+++|+++|+.++++.|+++|
T Consensus 345 ~~~l~~g~~l~~al~~A~a~aa~~v~~~Ga~~p 377 (383)
T 2abs_A 345 LYALSQGKTVKQCIMCGNACAQDVIQHVGFSLS 377 (383)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHTSSSCCCC
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHhcCCccCC
Confidence 999999999999999999999999999999866
No 8
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=100.00 E-value=4.5e-36 Score=247.06 Aligned_cols=219 Identities=20% Similarity=0.265 Sum_probs=183.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechh-hhhccCCCCCCCchhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLA-AANLFTPDHLHVPENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~-~~~~l~~~~i~~~~~~~~~~~~~ 78 (239)
+|.||+|.+|+++++.|+++||+++++.+ .+.+|+.+++++++ +++|+++.+.+ +...+++++++. ..+.+++
T Consensus 63 ig~vG~D~~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~-~g~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 137 (325)
T 3h49_A 63 MSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTE-DGERTFVTNRNGSLWKLNIDDVDF----ARFSQAK 137 (325)
T ss_dssp ECEEESSHHHHHHHHHHHHHTCBCSSCEEETTSCCCEEEEEECT-TSCEEEECCTTSHHHHCCGGGCCG----GGGGGCS
T ss_pred EEEECCChHHHHHHHHHHHcCCceeeEEecCCCCCceEEEEECC-CCceeEEeccCcccccCChhhcCh----hhhccCC
Confidence 58899999999999999999999999886 45689999888876 67888776553 446677777763 5688999
Q ss_pred EEEEeccccc--cChHHHHHHHHHhhhCC--CCC--h-hh-------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHH
Q psy6977 79 YYYVSGFFLT--VSPESILEVAKVALSCT--IRN--I-NY-------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLH 141 (239)
Q Consensus 79 ~~~~~g~~~~--~~~~~~~~~~~~~~~~g--~~~--~-p~-------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~ 141 (239)
+++++|+... .+.+.+.++++.+++.+ +++ + |. +.++++++ ++|++|+..|++. ++++
T Consensus 138 ~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~-----~~~~ 212 (325)
T 3h49_A 138 LLSLASIFNSPLLDGKALTEIFTQAKARQMIICADMIKPRLNETLDDICEALSYVDYLFPNFAEAKLLTGK-----ETLD 212 (325)
T ss_dssp EEEEEEETTSTTSCHHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHHHHTTCSEEECBHHHHHHHHTC-----SSHH
T ss_pred EEEEecccCCcccCHHHHHHHHHHHHhcCCEEEecCCchhhhhHHHHHHHHHhhCCEEecCHHHHHHHhCC-----CCHH
Confidence 9999986543 34578899999999888 332 2 32 23556665 9999999999976 5788
Q ss_pred HHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHH
Q psy6977 142 AIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIEC 221 (239)
Q Consensus 142 ~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~ 221 (239)
++++.+.++ |++.||||+|++|++++++++.+++|++++ .+++||+||||+|+|||++++++|+++++|+++
T Consensus 213 ~~~~~l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~--~~vvDttGAGDaf~ag~~~~l~~g~~~~~a~~~ 284 (325)
T 3h49_A 213 EIADCFLAC------GVKTVVIKTGKDGCFIKRGDMTMKVPAVAG--ITAIDTIGAGDNFASGFIAALLEGKNLRECARF 284 (325)
T ss_dssp HHHHHHHTT------TCSEEEEECTTSCEEEEETTEEEEECCCSS--CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHc------CCCEEEEEeCCCCeEEEECCeEEEecCcCC--CCCcCCCChhHHHHHHHHHHHHcCCCHHHHHHH
Confidence 888888875 899999999999999999998888888774 279999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCcC
Q psy6977 222 GVWAAQHIIQVSGCTL 237 (239)
Q Consensus 222 a~~~a~~~~~~~G~~~ 237 (239)
|+++|+.++++.|++.
T Consensus 285 A~~~aa~~v~~~G~~~ 300 (325)
T 3h49_A 285 ANATAAISVLSVGATT 300 (325)
T ss_dssp HHHHHHHHHTSSSSSS
T ss_pred HHHHHHHHHcccCCCC
Confidence 9999999999999874
No 9
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=100.00 E-value=4.5e-37 Score=250.83 Aligned_cols=222 Identities=18% Similarity=0.251 Sum_probs=189.9
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|.||+|.+|+.+++.|+++||+++++.+ .+.+|+.+++++++ +++++++.+++++..+++++++. ..+.++++++
T Consensus 60 ~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~-~g~~~~~~~~ga~~~~~~~~~~~--~~~~~~~~~~ 136 (304)
T 3ry7_A 60 ITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNA-EGQNTIYVYGGANMTMTPEDVIN--AKDAIINADF 136 (304)
T ss_dssp ECEEESSCTTHHHHHHHHHTTCBCTTCEEESSSCCEEEEEEECS-SCCEEEEEECGGGGGCCHHHHHT--THHHHHTCSE
T ss_pred EEEeCCChHHHHHHHHHHHcCCcchhEEEcCCCCCcEEEEEECC-CCCEEEEEecCchhcCCHHHHHH--HHHHhccCCE
Confidence 57899999999999999999999999886 56799999998886 57777777788888888766643 2356889999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-h---hHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhc
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-N---YLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISN 149 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p---~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~ 149 (239)
+++++ ..+.+.+..+++.+++.+ ++|+ + ...++++++ ++|++|+..|++....+.++++++++.+++
T Consensus 137 v~~~~---~~~~~~~~~~~~~a~~~~~~v~~D~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~ 213 (304)
T 3ry7_A 137 VVAQL---EVPIPAIISAFEIAKAHGVTTVLNPAPAKALPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFLS 213 (304)
T ss_dssp EEEET---TSCHHHHHHHHHHHHHTTCEEEEECCSCCCCCHHHHTTCSEECCBHHHHHHHHSCCCCSHHHHHHHHHHHHH
T ss_pred EEEcC---CCCHHHHHHHHHHHHHcCCEEEEeCCccccccHHHHHhCCEEecCHHHHHHHhCCCCCChhHHHHHHHHHHH
Confidence 99964 456788999999999988 5666 3 244677766 999999999998744344567788888887
Q ss_pred CCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcC-CCHHHHHHHHHHHHHH
Q psy6977 150 LPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKG-EPLSVCIECGVWAAQH 228 (239)
Q Consensus 150 ~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g-~~~~~a~~~a~~~a~~ 228 (239)
+ |++.|++|+|++|++++++++.+++|++++ +++||+||||+|+|||++++++| +++++|+++|+++|+.
T Consensus 214 ~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGDaf~a~~~~~l~~g~~~~~~a~~~A~~~aa~ 284 (304)
T 3ry7_A 214 I------GIKTVLITLGKQGTYFATKNQSQHIEAYKV---NAIDTTAAGDTFIGAFVSRLNKSQDNLADAIDFGNKASSL 284 (304)
T ss_dssp T------TCCEEEEECGGGCEEEECSSCEEEECCSSC---CSSCCSSHHHHHHHHHHHHCCTTCTTHHHHHHHHHHHHHT
T ss_pred c------CCCEEEEEeCCCceEEEECCeeEEecCCCc---ccCCCCCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 4 899999999999999999888999999988 79999999999999999999999 9999999999999999
Q ss_pred HHHhccCcC
Q psy6977 229 IIQVSGCTL 237 (239)
Q Consensus 229 ~~~~~G~~~ 237 (239)
++++.|++.
T Consensus 285 ~~~~~G~~~ 293 (304)
T 3ry7_A 285 TVQKHGAQA 293 (304)
T ss_dssp TSCCCCTGG
T ss_pred HhCCCCccc
Confidence 999999875
No 10
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=100.00 E-value=8.2e-36 Score=246.58 Aligned_cols=219 Identities=17% Similarity=0.190 Sum_probs=170.8
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEee--chhhhhccCCCCCCCchhhhcccce
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVA--NLAAANLFTPDHLHVPENNKLIQNA 77 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~--~~~~~~~l~~~~i~~~~~~~~~~~~ 77 (239)
+|.||+|.+|+.+++.|+++||+++++.+. +.+|+.+++.+++++.++.+.. ..+++..+++++++. +.++.+
T Consensus 78 ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~----~~l~~~ 153 (336)
T 4du5_A 78 ASRLGTDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDE----AWLLSA 153 (336)
T ss_dssp EEEECSSHHHHHHHHHHHTTTCEEEEEEECTTSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCH----HHHTTE
T ss_pred EEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCH----hHhccC
Confidence 478999999999999999999999999864 5689998888776343444422 346677888877764 578899
Q ss_pred eEEEEeccccccCh---HHHHHHHHHhhhCC---CCCh---hhH-----------HHHhhHH---hcCHHHHHHHHHHcC
Q psy6977 78 EYYYVSGFFLTVSP---ESILEVAKVALSCT---IRNI---NYL-----------HHRFIYL---VLIDFEALAFAKQQN 134 (239)
Q Consensus 78 ~~~~~~g~~~~~~~---~~~~~~~~~~~~~g---~~~~---p~~-----------~~~~~~~---~~n~~E~~~l~~~~~ 134 (239)
++++++|+.+..++ +.+.++++.+++.| ++|+ |.+ .++++++ ++|++|+..|++.
T Consensus 154 ~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~~l~g~-- 231 (336)
T 4du5_A 154 RHLHATGVFPAISATTLPAARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTGE-- 231 (336)
T ss_dssp EEEEEESSGGGSCTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSSHHHHHHHHHHHHTTCSEECCBHHHHHHHHCC--
T ss_pred CEEEEcCchhhCChHHHHHHHHHHHHHHHCCCEEEEeCcCCchhcCChHHHHHHHHHHHHhCCEEECCHHHHHHHhCC--
Confidence 99999997664433 56778889998888 3343 221 2455555 9999999999975
Q ss_pred CCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCC
Q psy6977 135 FQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEP 214 (239)
Q Consensus 135 ~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~ 214 (239)
++++++++.+.++ |++.||||+|++|++++++++.+++|+++++ +++||+||||+|+|||++++++|++
T Consensus 232 ---~~~~~~~~~l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~--~vvdttGAGDaf~a~~~~~l~~g~~ 300 (336)
T 4du5_A 232 ---TTPEGVARFYRQL------GAKLVVVKLGAEGAYFDGEAGSGRVAGFPVA--EVVDTVGAGDGFAVGVISALLDGLG 300 (336)
T ss_dssp ---CSHHHHHHHHHHT------TCSEEEEECGGGCEEEEETTEEEEECCCCC---------CHHHHHHHHHHHHHHTTCC
T ss_pred ---CCHHHHHHHHHhc------CCCEEEEEecCCceEEEECCeEEEeCCccCC--CCCCCccchHHHHHHHHHHHHcCCC
Confidence 6788889999885 8999999999999999999999999999881 3999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCc
Q psy6977 215 LSVCIECGVWAAQHIIQVSGCT 236 (239)
Q Consensus 215 ~~~a~~~a~~~a~~~~~~~G~~ 236 (239)
+++|+++|+++|+.++++.|++
T Consensus 301 l~~a~~~A~~~aa~~v~~~G~~ 322 (336)
T 4du5_A 301 VPEAVKRGAWIGARAVQVLGDS 322 (336)
T ss_dssp HHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHhccCCCc
Confidence 9999999999999999999987
No 11
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=100.00 E-value=2.1e-36 Score=250.30 Aligned_cols=220 Identities=22% Similarity=0.250 Sum_probs=167.4
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeec--hhhhhccCCCCCCCchhhhcccce
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVAN--LAAANLFTPDHLHVPENNKLIQNA 77 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~--~~~~~~l~~~~i~~~~~~~~~~~~ 77 (239)
+|.||+|.+|+++++.|+++||+++++.+ .+.+|+.+++.+++ +++|++..+ .+++..+++++++. ..++++
T Consensus 56 ig~vG~D~~g~~l~~~l~~~gV~~~~v~~~~~~~T~~~~v~~~~-~g~r~~~~~~~~~a~~~l~~~~~~~----~~~~~~ 130 (338)
T 3ljs_A 56 VGMLGSDMFGDFLFDSFAEAGVVTDGIVRTSTAKTALAFVALDA-HGERSFSFYRPPAADLLFRVEHFQD----ASFSDA 130 (338)
T ss_dssp ESEEESSHHHHHHHHHHHHHTCBCTTCEEESSSCCCEEEEECCS-TTCCEEEEECSSCGGGGCCGGGCCH----HHHHTE
T ss_pred EeeccCCHHHHHHHHHHHHcCCCceeEEEcCCCCceEEEEEECC-CCCeEEEEeCCCChhHhCCHhhcCH----hHhcCC
Confidence 58899999999999999999999999886 56689999888875 567765443 36667788887763 567899
Q ss_pred eEEEEeccccc--cChHHHHHHHHHhhhCC---CCCh---hh-----------HHHHhhHH---hcCHHHHHHHHHHcCC
Q psy6977 78 EYYYVSGFFLT--VSPESILEVAKVALSCT---IRNI---NY-----------LHHRFIYL---VLIDFEALAFAKQQNF 135 (239)
Q Consensus 78 ~~~~~~g~~~~--~~~~~~~~~~~~~~~~g---~~~~---p~-----------~~~~~~~~---~~n~~E~~~l~~~~~~ 135 (239)
+++|++++.+. .+.+.+.++++.+++.| ++|+ +. +.++++++ ++|++|+..|++...
T Consensus 131 ~~~~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~- 209 (338)
T 3ljs_A 131 LIFHACSNSMTDADIAEVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANTLA- 209 (338)
T ss_dssp EEEEEEGGGGSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEHHHHHHHHHHHT-
T ss_pred CEEEECChHhcCchHHHHHHHHHHHHHHcCCEEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCC-
Confidence 99999986543 34578899999999888 3333 22 22555655 999999999998732
Q ss_pred CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcC---
Q psy6977 136 QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKG--- 212 (239)
Q Consensus 136 ~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g--- 212 (239)
.+.+++++.++++ |++.||||+|++|++++++++.++++++++ +++||+||||+|+|||++++++|
T Consensus 210 --~~~~~~~~~l~~~------g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~a~~~~~l~~g~~~ 278 (338)
T 3ljs_A 210 --ADANAVIQQLWQG------RAQLLLVTDAAGPVHWYTRTAGGEVPTFRV---QVQDSNAAGDAFVGGMLYTFAQQFDD 278 (338)
T ss_dssp --SCHHHHHHHHTTT------TCCEEEEEETTEEEEEEESSCEEEECC--------------CHHHHHHHHHHHHHHCSS
T ss_pred --hhHHHHHHHHHhc------CCCEEEEeeCCCceEEEECCceEEeCCCCC---ccCCCCCccHHHHHHHHHHHHhCCCc
Confidence 1223377888774 899999999999999999999999999988 89999999999999999999999
Q ss_pred -----------CCHHHHHHHHHHHHHHHHHhccCcC
Q psy6977 213 -----------EPLSVCIECGVWAAQHIIQVSGCTL 237 (239)
Q Consensus 213 -----------~~~~~a~~~a~~~a~~~~~~~G~~~ 237 (239)
.++++|+++|+++|+.++++.|++.
T Consensus 279 ~~~~~~~~~~~~~l~~al~~A~~~aa~~v~~~Ga~~ 314 (338)
T 3ljs_A 279 AAALIDFCHDPESIVSTLRFAAAVGALAVTRQGAFT 314 (338)
T ss_dssp THHHHHHHTCHHHHHHHHHHHHHHHGGGC----CCC
T ss_pred ccchhccccChHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 8999999999999999999999875
No 12
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=100.00 E-value=1.6e-36 Score=249.15 Aligned_cols=224 Identities=20% Similarity=0.274 Sum_probs=178.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhh---hhccCCCCCCCchhhhcccc
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAA---ANLFTPDHLHVPENNKLIQN 76 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~---~~~l~~~~i~~~~~~~~~~~ 76 (239)
+|+||+|.+|+.+++.|+++||+++++.+. +.+|+.+++.+++ +++|+++.+++. +..+++++++ ...+.+++
T Consensus 53 ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~i~~~~-~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~ 129 (319)
T 3lhx_A 53 VTALGTDSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDS-TGERTFYYWRNEAAAKFWLASEQSA--AICEELAN 129 (319)
T ss_dssp ECEECSSHHHHHHHHHHHTTTEECTTCEECTTCCCCEEEEEC-----CCEEEEECTTCGGGGTTSSSSHH--HHHHHHTT
T ss_pred EEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEeCC-CCCeeEEEecCCCHHHhccCccchh--hHHHHhcC
Confidence 578999999999999999999999998865 5589998888875 667777766542 2345544432 23467889
Q ss_pred eeEEEEeccccc-c---ChHHHHHHHHHhhhCC---CCCh---hhH-----------HHHhhHH---hcCHHHHHHHHHH
Q psy6977 77 AEYYYVSGFFLT-V---SPESILEVAKVALSCT---IRNI---NYL-----------HHRFIYL---VLIDFEALAFAKQ 132 (239)
Q Consensus 77 ~~~~~~~g~~~~-~---~~~~~~~~~~~~~~~g---~~~~---p~~-----------~~~~~~~---~~n~~E~~~l~~~ 132 (239)
+++++++|+.+. + +.+.+.++++.+++.| ++|+ +.+ .++++++ ++|.+|+..|++.
T Consensus 130 ~~~v~~~g~~~~~l~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~di~~~n~~E~~~l~g~ 209 (319)
T 3lhx_A 130 FDYLYLSGISLAILSPTSREKLLSLLRECRAKGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQ 209 (319)
T ss_dssp CSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEEEHHHHHHHHCC
T ss_pred CCEEEEcCchhhhcCchhHHHHHHHHHHHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHHhhCCcccCCHHHHHHHhCC
Confidence 999999987654 2 2367889999999888 4444 322 2455555 8999999999875
Q ss_pred cCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEE-EEeccCCCCCCcccCCCCchhhhHHHHHHHHc
Q psy6977 133 QNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTT-EFPVQRLPAESVVDTNGAGDSFVGGFLSQLIK 211 (239)
Q Consensus 133 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~-~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~ 211 (239)
++++++++.+.++ |++.||||+|++|++++++++.+ ++|+++++..+++||+||||+|+|||++++++
T Consensus 210 -----~~~~~~~~~l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~ 278 (319)
T 3lhx_A 210 -----QPVEDVIARTHNA------GVKEVVVKRGADSCLVSIAGEALVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLT 278 (319)
T ss_dssp -----CCHHHHHHHHHHT------TCSEEEEEETTEEEEEEETTSCCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTT
T ss_pred -----CCHHHHHHHHHhc------CCCEEEEEECCCCeEEEECCcceEEcccccCCCCccCCCCCccHHHHHHHHHHHHc
Confidence 6788899999885 89999999999999999887654 88876222237999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHhccCcCC
Q psy6977 212 GEPLSVCIECGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 212 g~~~~~a~~~a~~~a~~~~~~~G~~~~ 238 (239)
|+++++|+++|+++|+.++++.|+++|
T Consensus 279 g~~~~~a~~~A~~~aa~~v~~~Ga~~~ 305 (319)
T 3lhx_A 279 GGSAENAAKRGHLTASTVIQYRGAIIP 305 (319)
T ss_dssp TCCHHHHHHHHHHHHHHHTTSSSSSCC
T ss_pred CCCHHHHHHHHHHHHHhhhccCCCcCC
Confidence 999999999999999999999999876
No 13
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=100.00 E-value=2.9e-36 Score=248.76 Aligned_cols=218 Identities=14% Similarity=0.169 Sum_probs=179.6
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCcee-Eeec-hhhhhccCCCCCCCchhhhcccce
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARS-LVAN-LAAANLFTPDHLHVPENNKLIQNA 77 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~-~~~~-~~~~~~l~~~~i~~~~~~~~~~~~ 77 (239)
+|.||+|.+|+.+++.|+++||+++++.+ .+.+|+.+++.+++ +++|+ .+.. .++...++++++.. ..++++
T Consensus 57 i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~i~~~~-~g~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~ 131 (330)
T 3iq0_A 57 ISCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHN-SGDRDFIFNIKNAACGKLSAQHVDE----NILKDC 131 (330)
T ss_dssp EEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCEEEEEEECC----CEEEEECTTSGGGGCCGGGCCG----GGGTTE
T ss_pred EEEeCCChHHHHHHHHHHHcCCCeeeEEEcCCCCceEEEEEECC-CCCeeEEEeccCChhhhCCHhhCCH----hHhccC
Confidence 47899999999999999999999999986 45699999888876 56663 3332 34566677777764 578899
Q ss_pred eEEEEeccccc--cChHHHHHHHHHhhhCC---CCCh---hhH----------HHHhhHH---hcCHHHHHHHHHHcCCC
Q psy6977 78 EYYYVSGFFLT--VSPESILEVAKVALSCT---IRNI---NYL----------HHRFIYL---VLIDFEALAFAKQQNFQ 136 (239)
Q Consensus 78 ~~~~~~g~~~~--~~~~~~~~~~~~~~~~g---~~~~---p~~----------~~~~~~~---~~n~~E~~~l~~~~~~~ 136 (239)
++++++|+.+. .+.+.+.++++.+++.| ++|+ +.+ .++++++ ++|++|+..|++.
T Consensus 132 ~~v~~sg~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~---- 207 (330)
T 3iq0_A 132 THFHIMGSSLFSFHMVDAVKKAVTIVKANGGVISFDPNIRKEMLDIPEMRDALHFVLELTDIYMPSEGEVLLLSPH---- 207 (330)
T ss_dssp EEEEEEGGGCSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGGGSHHHHHHHHHHHHTCSEECCBGGGTTTTCSC----
T ss_pred CEEEEechhhcCcchHHHHHHHHHHHHHcCCEEEEcCCCCccccCcHHHHHHHHHHHhhCCEEecCHHHHHHHhCC----
Confidence 99999998761 23466889999999888 4444 321 2455555 9999999988765
Q ss_pred ccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHH
Q psy6977 137 TEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLS 216 (239)
Q Consensus 137 ~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~ 216 (239)
++++++++.+.++ |++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|++++
T Consensus 208 -~~~~~~~~~l~~~------g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~~ 277 (330)
T 3iq0_A 208 -STPERAIAGFLEE------GVKEVIVKRGNQGASYYSANEQFHVESYPV---EEVDPTGAGDCFGGAWIACRQLGFDAH 277 (330)
T ss_dssp -SSHHHHHHHHHHH------TCSEEEEECGGGCEEEECSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHH
T ss_pred -CCHHHHHHHHHHc------CCCEEEEEeCCCceEEEECCceEEecCCCC---ccCCCCChHHHHHHHHHHHHHcCCCHH
Confidence 6788888888885 899999999999999999888999999988 899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCcC
Q psy6977 217 VCIECGVWAAQHIIQVSGCTL 237 (239)
Q Consensus 217 ~a~~~a~~~a~~~~~~~G~~~ 237 (239)
+|+++|+++|+.++++.|++.
T Consensus 278 ~a~~~A~~~aa~~v~~~G~~~ 298 (330)
T 3iq0_A 278 RALQYANACGALAVTRRGPME 298 (330)
T ss_dssp HHHHHHHHHHHHHTTSCSSST
T ss_pred HHHHHHHHHHHHHHcCcCCCC
Confidence 999999999999999999864
No 14
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1.4e-35 Score=245.64 Aligned_cols=213 Identities=18% Similarity=0.109 Sum_probs=182.8
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|.+|+.+++.|+++||+++++.+ .+.+|+.+++++++ +++|+++.+.+++..++++++.. +.+.++++
T Consensus 86 i~~vG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~T~~~~v~~~~-~g~r~~~~~~~~~~~~~~~~l~~----~~l~~~~~ 160 (343)
T 2rbc_A 86 WGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDN-RGERLIVPFYDHRLHEKKRACTP----EDIALFDA 160 (343)
T ss_dssp ECEEESSHHHHHHHHHHHHTTEECTTCEEETTCCCEEEEEEECT-TSCEEEEEECCGGGGSSCCCCCH----HHHTTCSE
T ss_pred EEEeCCCHHHHHHHHHHHHcCCceeeEEEcCCCCCceEEEEECC-CCCEEEEEcCCCcccCChhHhcH----hhhCCCCE
Confidence 57899999999999999999999999886 45689999988876 67788776777766777766642 56789999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-h---hHHH-HhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHh
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-N---YLHH-RFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKIS 148 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p---~~~~-~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 148 (239)
++++++. ++.+..+++.+++.+ ++|+ + .+.+ +++++ ++|++|+..|++. ++++++++.+.
T Consensus 161 v~~~~~~----~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~-----~~~~~~~~~l~ 231 (343)
T 2rbc_A 161 VLVDVRW----PELALDVLTVARALGKPAILDGDVAPVETLEGLAPAATHIVFSEPAATRLTGL-----ETVKDMLPVLH 231 (343)
T ss_dssp EEECSSS----HHHHHHHHHHHHHTTCCEEEEECSCCHHHHHHHGGGCSEEEEEHHHHHHHHCC-----SSHHHHHHHHH
T ss_pred EEEcCCC----HHHHHHHHHHHHHCCCEEEEECCccccccHHHHHhcCCEEEeCHHHHHHHcCC-----CCHHHHHHHHH
Confidence 9998754 367888899998887 6666 3 3445 77776 9999999999875 57888888888
Q ss_pred cCCCCCCCCc-eEEEEeeCCCcEEEEECC--eEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHH
Q psy6977 149 NLPKQNPNRE-RITIITQGDKPIILSQNG--KTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWA 225 (239)
Q Consensus 149 ~~~~~~~~g~-~~vvvt~G~~G~~~~~~~--~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~ 225 (239)
++ |+ +.||||+|++|+++++++ +.+++|++++ +++||+||||+|+|||++++++|+++++|+++|+++
T Consensus 232 ~~------g~~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~~~~l~~g~~~~~a~~~A~~~ 302 (343)
T 2rbc_A 232 AR------YPQTFIAVTAGPAGCWWTEADDPTVHFQTTMQV---EAVDTLAAGDIFHGTFALAMAEGMQSRAAVRLSSVA 302 (343)
T ss_dssp HH------STTSEEEEECGGGCEEEECTTCCCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred Hh------CCCceEEEEECCcceEEEeCCCceeEEecCCCC---ccccCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 85 88 999999999999999887 7888999887 799999999999999999999999999999999999
Q ss_pred HHHHHHhccCc
Q psy6977 226 AQHIIQVSGCT 236 (239)
Q Consensus 226 a~~~~~~~G~~ 236 (239)
|+.++++.|++
T Consensus 303 aa~~v~~~G~~ 313 (343)
T 2rbc_A 303 AALKCTVFGGR 313 (343)
T ss_dssp HHHHHTSSSGG
T ss_pred HHHHhCCCCCc
Confidence 99999999986
No 15
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=100.00 E-value=1.1e-35 Score=245.07 Aligned_cols=218 Identities=21% Similarity=0.243 Sum_probs=179.1
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhhhh---ccCCCCCCCchhhhcccc
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAAAN---LFTPDHLHVPENNKLIQN 76 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~~~---~l~~~~i~~~~~~~~~~~ 76 (239)
+|+||+|.+|+.+++.|+++||+++++.+. +.+|+.+++.++ +++|+++.+++... .++..++ ..+.+++
T Consensus 72 ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~v~~~--~g~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 145 (328)
T 4e69_A 72 FSAIGDDALSQQMRAAMSAAGIDGGGLRVIPGRTVGLYLITLE--QGERSFAYWRGQSAARELAGDADA----LAAAMAR 145 (328)
T ss_dssp ECEECSSHHHHHHHHHHHHTTEECTTCEECTTCCCEEEEEEEE--TTEEEEEEECTTCGGGGTTSCHHH----HHHHHTT
T ss_pred EEeeCCCHHHHHHHHHHHHcCCccceEEEcCCCCCeEEEEEec--CCceEEEEeCCCCHHHhhcCcccc----chHHhcC
Confidence 578999999999999999999999998864 558999888887 67787776655322 1222111 1267889
Q ss_pred eeEEEEeccccc----cChHHHHHHHHHhhhCC---CCCh---hhH-----------HHHhhHH---hcCHHHHHHHHHH
Q psy6977 77 AEYYYVSGFFLT----VSPESILEVAKVALSCT---IRNI---NYL-----------HHRFIYL---VLIDFEALAFAKQ 132 (239)
Q Consensus 77 ~~~~~~~g~~~~----~~~~~~~~~~~~~~~~g---~~~~---p~~-----------~~~~~~~---~~n~~E~~~l~~~ 132 (239)
+++++++|+.+. .+.+.+.++++.+++.+ ++|+ |.+ .++++++ ++|++|+..|++.
T Consensus 146 ~~~v~~~g~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~ 225 (328)
T 4e69_A 146 ADVVYFSGITLAILDQCGRATLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAWFGD 225 (328)
T ss_dssp CSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCHHHHHHHHHHHHTTCSEECCBHHHHHHHHTC
T ss_pred CCEEEECCchhhccCchHHHHHHHHHHHHHhCCCEEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEeCCHHHHHHHcCC
Confidence 999999987553 23467788899998888 4444 322 2555555 8999999999976
Q ss_pred cCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccC-CCCCCcccCCCCchhhhHHHHHHHHc
Q psy6977 133 QNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQR-LPAESVVDTNGAGDSFVGGFLSQLIK 211 (239)
Q Consensus 133 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~-~~~~~vvdt~GaGDaf~ag~~~~l~~ 211 (239)
++++++++.+.++ |++.||||+|++|++++++++.+++|+++ + +++||+||||+|+|||++++++
T Consensus 226 -----~~~~~~~~~l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~---~vvdttGAGDaf~a~~~~~l~~ 291 (328)
T 4e69_A 226 -----AGPDATADRYARA------GVRSVVVKNGPHAVHFLQDGRRGRVPVPPVA---QVVDTTAAGDSFNAGLLDSVLA 291 (328)
T ss_dssp -----SSHHHHHHHHHTT------TCSEEEEBCTTSCEEEEETTEEEEECCCCCC---SCCCCTTHHHHHHHHHHHHHHT
T ss_pred -----CCHHHHHHHHHhc------CCCEEEEEeCCCCeEEEeCCceEEecCCCCC---CccCCCChhHHHHHHHHHHHHC
Confidence 5888899998885 89999999999999999999888988875 5 8999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHhccCcCC
Q psy6977 212 GEPLSVCIECGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 212 g~~~~~a~~~a~~~a~~~~~~~G~~~~ 238 (239)
|+++++|+++|+++|+.++++.|+++|
T Consensus 292 g~~l~~a~~~A~~~aa~~v~~~Ga~~p 318 (328)
T 4e69_A 292 GQPLETAIAAAAALAGQVVQGKGALVE 318 (328)
T ss_dssp TCCHHHHHHHHHHHHHHHHTSSSSSCC
T ss_pred CCCHHHHHHHHHHHHHHHHccCCCcCC
Confidence 999999999999999999999999987
No 16
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=100.00 E-value=1.1e-35 Score=243.15 Aligned_cols=221 Identities=20% Similarity=0.247 Sum_probs=184.9
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|.+|+.+++.|+++||+++++.+ .+.+|+.+++++++ +++|+++.+++++..+++++++. ..+.++.+++
T Consensus 61 ~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~-~g~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~ 137 (309)
T 1rkd_A 61 IACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNG-EGENVIGIHAGANAALSPALVEA--QRERIANASA 137 (309)
T ss_dssp EEEEESSTTHHHHHHHHHTTTEECTTEEEETTCCCEEEEEEECT-TSCEEEEEECGGGGGCCHHHHHT--THHHHHHCSE
T ss_pred EEEECCCHHHHHHHHHHHHcCCCccceEecCCCCCceEEEEECC-CCCeEEEEeCCchhcCCHHHHHH--HHHhcccCCE
Confidence 47899999999999999999999999886 46699999998876 57777777777777777766543 2246788999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-h--h-HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhc
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-N--Y-LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISN 149 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p--~-~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~ 149 (239)
+++++ ..+.+.+..+++.+++.| ++|+ + . ..++++++ ++|++|+..|++....+.++++++++.+.+
T Consensus 138 v~~~~---~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~ 214 (309)
T 1rkd_A 138 LLMQL---ESPLESVMAAAKIAHQNKTIVALNPAPARELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHE 214 (309)
T ss_dssp EEECS---SSCHHHHHHHHHHHHHTTCEEEECCCSCCCCCHHHHTTCSEECCCHHHHHHHHSCCCSSHHHHHHHHHHHHH
T ss_pred EEEeC---CCCHHHHHHHHHHHHHcCCEEEEECCccccchHHHHhhCCEEEcCHHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 99964 355688889999999888 5666 2 2 23666665 999999999998633233557777888887
Q ss_pred CCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy6977 150 LPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHI 229 (239)
Q Consensus 150 ~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~ 229 (239)
+ |++.||||+|++|++++++++.++++++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.+
T Consensus 215 ~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vdt~GAGD~f~a~~~~~l~~g~~~~~a~~~a~~~aa~~ 285 (309)
T 1rkd_A 215 K------GIRTVLITLGSRGVWASVNGEGQRVPGFRV---QAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIA 285 (309)
T ss_dssp T------TCSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred h------CCCEEEEEECCCcEEEEeCCceEEcCCCCC---CcCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 4 899999999999999999888889998887 7999999999999999999999999999999999999999
Q ss_pred HHhccCc
Q psy6977 230 IQVSGCT 236 (239)
Q Consensus 230 ~~~~G~~ 236 (239)
+++.|++
T Consensus 286 ~~~~G~~ 292 (309)
T 1rkd_A 286 VTRKGAQ 292 (309)
T ss_dssp HTSSSSG
T ss_pred cCCCCcc
Confidence 9999986
No 17
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=100.00 E-value=1.3e-35 Score=242.79 Aligned_cols=225 Identities=17% Similarity=0.144 Sum_probs=183.3
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCc-hhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVP-ENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~-~~~~~~~~~~~ 79 (239)
+|.||+| +|+.+++.|+++||+++++.+.+ +|+.+.+++...+++++++...++ .+++++++.. +..+.+..+++
T Consensus 58 i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~~~~~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~ 133 (309)
T 3umo_A 58 IFPAGGA-TGEHLVSLLADENVPVATVEAKD-WTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIESGAI 133 (309)
T ss_dssp EEEECHH-HHHHHHHHHHHTTCCEEEEECSS-CCCCCEEEEETTTCCEEEEECCCC--CCCHHHHHHHHHHHTTSCTTCE
T ss_pred EEEecCc-hHHHHHHHHHHcCCceEEEEecC-CCeeEEEEEECCCCcEEEEEcCCC--CCCHHHHHHHHHHHHhcCCCCE
Confidence 4789999 99999999999999999998754 566666666654678887766654 3555444210 11122467889
Q ss_pred EEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHhhH--H---hcCHHHHHHHHHHcCCCccCHHHHHHHHh
Q psy6977 80 YYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRFIY--L---VLIDFEALAFAKQQNFQTEDLHAIALKIS 148 (239)
Q Consensus 80 ~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~~~--~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 148 (239)
++++|+.+. .+.+.+.++++.+++.| ++|+ +.+.+++++ + ++|++|+..|++....+.+++.++++.+.
T Consensus 134 ~~~~g~~~~~~~~~~~~~~~~~a~~~~~~v~~D~~~~~l~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~ 213 (309)
T 3umo_A 134 LVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGEALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIV 213 (309)
T ss_dssp EEEESCCCTTCCHHHHHHHHHHHHHTTCEEEEECCHHHHHHHTSSCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHHH
T ss_pred EEEEccCCCCCCHHHHHHHHHHHHhcCCEEEEECCcHHHHHHhccCCCeEEEeCHHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 999997553 66788999999999988 6777 455566654 2 99999999999875445567888888888
Q ss_pred cCCCCCCCCc-eEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHH
Q psy6977 149 NLPKQNPNRE-RITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQ 227 (239)
Q Consensus 149 ~~~~~~~~g~-~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~ 227 (239)
++ |. +.|+||+|++|++++++++.++++++++ +++||+||||+|+|||++++++|+++++|+++|+++|+
T Consensus 214 ~~------g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGD~f~a~~~~~l~~g~~~~~a~~~A~~~aa 284 (309)
T 3umo_A 214 NS------GKAKRVVVSLGPQGALGVDSENCIQVVPPPV---KSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGS 284 (309)
T ss_dssp HT------TSBSCEEEECGGGCEEEECSSCEEEECCCSC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred Hc------CCCcEEEEEcCcccEEEEECCcEEEEeCCCc---CCCCCcChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 85 65 8999999999999999988899999887 89999999999999999999999999999999999999
Q ss_pred HHHHhccCcCC
Q psy6977 228 HIIQVSGCTLG 238 (239)
Q Consensus 228 ~~~~~~G~~~~ 238 (239)
.++++.|+++|
T Consensus 285 ~~v~~~G~~~~ 295 (309)
T 3umo_A 285 AATLNQGTRLC 295 (309)
T ss_dssp HHTTSSTTCCC
T ss_pred HHhcCCCCCCC
Confidence 99999999865
No 18
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=100.00 E-value=1.7e-35 Score=243.03 Aligned_cols=217 Identities=16% Similarity=0.160 Sum_probs=178.1
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeech--hh-hhccCCCCCCCchhhhcccc
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANL--AA-ANLFTPDHLHVPENNKLIQN 76 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~--~~-~~~l~~~~i~~~~~~~~~~~ 76 (239)
+|.||+|.+|+.+++.|+++||+++++.+ .+.+|+.+++.++. +++++++.+. ++ +..+++++++. ..+++
T Consensus 61 i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~-~g~~~~~~~~~~~a~~~~~~~~~~~~----~~~~~ 135 (319)
T 3pl2_A 61 LSRVGNDPFGEYLLAELERLGVDNQYVATDQTFKTPVTFCEIFP-PDDFPLYFYREPKAPDLNIESADVSL----DDVRE 135 (319)
T ss_dssp EEEEESSHHHHHHHHHHHHTTEECTTEEEESSSCCCEEEECCBT-TTBCCEEEECCSCCGGGGCCGGGSCH----HHHHH
T ss_pred EEEeCCCHHHHHHHHHHHHcCCccccEEecCCCCceEEEEEEcC-CCCeeEEEecCCCcccccCChhhCCH----HHhcc
Confidence 47899999999999999999999999885 56689988877765 5566555442 33 56777777653 67789
Q ss_pred eeEEEEeccccccC--hHHHHHHHHHhhhCC--CCCh---hh-----------HHHHhhHH---hcCHHHHHHHHHHcCC
Q psy6977 77 AEYYYVSGFFLTVS--PESILEVAKVALSCT--IRNI---NY-----------LHHRFIYL---VLIDFEALAFAKQQNF 135 (239)
Q Consensus 77 ~~~~~~~g~~~~~~--~~~~~~~~~~~~~~g--~~~~---p~-----------~~~~~~~~---~~n~~E~~~l~~~~~~ 135 (239)
++++|++|+.+... .+....+++.+++.+ ++|+ +. +.++++++ ++|++|+..|++.
T Consensus 136 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~--- 212 (319)
T 3pl2_A 136 ADILWFTLTGFSEEPSRGTHREILTTRANRRHTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAVGE--- 212 (319)
T ss_dssp CSEEEEEGGGGSSTTHHHHHHHHHHHHTTCSCEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEECHHHHHHHHSC---
T ss_pred CCEEEEecccccCchhHHHHHHHHHHHHHCCcEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEEcCHHHHHHHcCC---
Confidence 99999999865532 245667777777655 3332 22 22556655 9999999999975
Q ss_pred CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCH
Q psy6977 136 QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPL 215 (239)
Q Consensus 136 ~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~ 215 (239)
++++++++.+.++ |++.|+||+|++|++++++++.++++++++ +++||+||||+|+|||++++++|+++
T Consensus 213 --~~~~~~~~~l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~ 281 (319)
T 3pl2_A 213 --TEPERAGRALLER------GVELAIVKQGPKGVMAMTKDETVEVPPFFV---DVINGLGAGDAFGGALCHGLLSEWPL 281 (319)
T ss_dssp --CSHHHHHHHHHHT------TCSEEEEEEETTEEEEECSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCH
T ss_pred --CCHHHHHHHHHhc------CCCEEEEEECCCCeEEEECCceEEeCCccc---CCCCCcCchHHHHHHHHHHHHcCCCH
Confidence 6788888888885 899999999999999999888999999988 79999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCc
Q psy6977 216 SVCIECGVWAAQHIIQVSGCT 236 (239)
Q Consensus 216 ~~a~~~a~~~a~~~~~~~G~~ 236 (239)
++|+++|+++|+.++++.|++
T Consensus 282 ~~a~~~A~~~aa~~v~~~G~~ 302 (319)
T 3pl2_A 282 EKVLRFANTAGALVASRLECS 302 (319)
T ss_dssp HHHHHHHHHHHHHHHTSSCSG
T ss_pred HHHHHHHHHHHHHHHhccCCc
Confidence 999999999999999999986
No 19
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=100.00 E-value=3.6e-36 Score=249.93 Aligned_cols=225 Identities=15% Similarity=0.107 Sum_probs=177.0
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeec-hhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVAN-LAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~-~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|.+|+.+++.|+++||++..+...+.+|+.++++++. ++++..+.. .+.+..+.++.+ ....+.++++++
T Consensus 113 ig~vG~D~~G~~i~~~L~~~GV~~~~~~~~~~~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~ 189 (352)
T 4e84_A 113 LCVVGCDEPGERIVELLGSSGVTPHLERDPALPTTIKLRVLAR-QQQLLRVDFEAMPTHEVLLAGL--ARFDVLLPQHDV 189 (352)
T ss_dssp EEEEESSHHHHHHHHHHTTTSCEEEEEEETTSCCCEEEEEEES-SCEEEEEEECCCCCHHHHHHHH--HHHHHHGGGCSE
T ss_pred EEEeCCChhHHHHHHHHHHcCCceeeEECCCCCCceEEEEEcC-CceEEEEEcCCCCCHHHHHHHH--HHHHHhcccCCE
Confidence 5789999999999999999999996665666799999888875 444433322 222111111111 122367889999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-hhHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhcCCC
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-NYLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISNLPK 152 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~ 152 (239)
++++|+.. .+.+.+.++++.+++.| ++|+ +..+++++++ ++|++|++.|++ ...+.+++.++++.+.+.
T Consensus 190 v~~~g~~~-~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~l~~~dil~pN~~Ea~~l~g-~~~~~~~~~~~a~~l~~~-- 265 (352)
T 4e84_A 190 VLMSDYAK-GGLTHVTTMIEKARAAGKAVLVDPKGDDWARYRGASLITPNRAELREVVG-QWKSEDDLRARVANLRAE-- 265 (352)
T ss_dssp EEEECCSS-SSCSSHHHHHHHHHHTTCEEEEECCSSCCSTTTTCSEECCBHHHHHHHHC-CCSSHHHHHHHHHHHHHH--
T ss_pred EEEeCCCC-CCHHHHHHHHHHHHhcCCEEEEECCCcchhhccCCcEEcCCHHHHHHHhC-CCCCHHHHHHHHHHHHHH--
Confidence 99998653 23344788999999888 6777 5555566665 999999999998 333445677777777642
Q ss_pred CCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 153 QNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 153 ~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
.|++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.++++
T Consensus 266 ---~g~~~VvvT~G~~Ga~~~~~~~~~~~pa~~v---~vvDttGAGDaF~ag~l~~l~~g~~l~~al~~A~aaaa~~v~~ 339 (352)
T 4e84_A 266 ---LDIDALLLTRSEEGMTLFSAGGELHAPALAR---EVFDVSGAGDTVIATVATMLGAGVPLVDAVVLANRAAGIVVGK 339 (352)
T ss_dssp ---HTCSEEEEECGGGCEEEEETTEEEEECCCCS---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTS
T ss_pred ---hCCCEEEEEcCCCcEEEEECCceEEecCCCc---CccCCccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC
Confidence 2889999999999999999999999999988 8999999999999999999999999999999999999999999
Q ss_pred ccCcCC
Q psy6977 233 SGCTLG 238 (239)
Q Consensus 233 ~G~~~~ 238 (239)
.|++.+
T Consensus 340 ~Ga~~~ 345 (352)
T 4e84_A 340 LGTATV 345 (352)
T ss_dssp SSSCCC
T ss_pred CCCccC
Confidence 999865
No 20
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=100.00 E-value=8.9e-36 Score=247.33 Aligned_cols=225 Identities=10% Similarity=0.083 Sum_probs=181.1
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeec----hhhhhccCCCCCCCchhhhcccc
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVAN----LAAANLFTPDHLHVPENNKLIQN 76 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~----~~~~~~l~~~~i~~~~~~~~~~~ 76 (239)
+|+||+|.+|+.+++.|+++||+++++.+.+.+|+.+++.++. +++++++.+ .++...+++++++ +.+.+++
T Consensus 54 i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~t~~~~~~~~~-~~~~~~~~~~~~~~~a~~~l~~~~~~---~~~~~~~ 129 (346)
T 3ktn_A 54 ITKLPANRLGEAGKAALRKLGISDQWVGEKGDHIGSFFAEMGY-GIRPTQVTYQNRHQSAFGISEAKDYD---FEAFLAE 129 (346)
T ss_dssp EEEECSSHHHHHHHHHHHHTTCBCTTEEECCSCCEEEEEECCB-TTBCCEEEECCCTTSTTTTCCGGGSC---HHHHHTT
T ss_pred EEecCCCHHHHHHHHHHHHcCCcceEEEeCCCceEEEEEEecC-CCCCceEEecCCCCChhhhCChhhcC---hHHHhCC
Confidence 5789999999999999999999999998766789888877653 555555544 3455667777665 2267889
Q ss_pred eeEEEEeccccccCh---HHHHHHHHHhhhCC---CCCh---hh-------------HHHHhhHH---hcCHHHHHHHHH
Q psy6977 77 AEYYYVSGFFLTVSP---ESILEVAKVALSCT---IRNI---NY-------------LHHRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 77 ~~~~~~~g~~~~~~~---~~~~~~~~~~~~~g---~~~~---p~-------------~~~~~~~~---~~n~~E~~~l~~ 131 (239)
++++|++|+.+..++ +.+.++++.+++.| ++|+ +. +.++++++ ++|++|+..|++
T Consensus 130 ~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g 209 (346)
T 3ktn_A 130 VDMVHICGISLSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLG 209 (346)
T ss_dssp CSEEEECTHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCCHHHHHHHHHHHHHHGGGCSEEECCHHHHHHTSC
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHHHHcCCEEEEeCCCChHHcCCccHHHHHHHHHHHHHhCCEEEccHHHHHHHhC
Confidence 999999998764433 67889999999888 3333 21 22566665 999999999987
Q ss_pred Hc-CC---CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCc-------EEEEECCeEEEEeccCCCCCCcccCCCCchh
Q psy6977 132 QQ-NF---QTEDLHAIALKISNLPKQNPNRERITIITQGDKP-------IILSQNGKTTEFPVQRLPAESVVDTNGAGDS 200 (239)
Q Consensus 132 ~~-~~---~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G-------~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDa 200 (239)
.. .. +.++++++++.+.++ .|++.||||+|++| ++++++++.+++|++++ +++||+||||+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~l~~~-----~g~~~vvvT~G~~G~~~~~~g~~~~~~~~~~~~~~~~v---~vvdttGAGDa 281 (346)
T 3ktn_A 210 FIPREDLEGEAQETELIQRFMSQ-----YNLEWFAGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPL---LNLDRIGAGDA 281 (346)
T ss_dssp CCCCTTSCHHHHHHHHHHHHHHH-----HTCSEEEEEEEEECSSCEEEEEEEECSSCEEECCCEEC---CCSCCTTHHHH
T ss_pred CCCCccccchHHHHHHHHHHHHh-----cCCCEEEEecCccccccCcceEEEEECCceEEeCCCcc---ccCCCCchhHH
Confidence 63 11 123567777777763 28899999999998 88888888899999988 79999999999
Q ss_pred hhHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhccCcC
Q psy6977 201 FVGGFLSQLIKGEPLSVCIECGVWAAQHIIQVSGCTL 237 (239)
Q Consensus 201 f~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~~~G~~~ 237 (239)
|+|||+++|++|+++++|+++|+++|+.++++.|++.
T Consensus 282 F~ag~~~~l~~g~~l~~a~~~A~a~aa~~v~~~G~~~ 318 (346)
T 3ktn_A 282 YAAGILYGYSQNWSLEKAVTFATVNGVLAHTIQGDIP 318 (346)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSSCC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCCCCC
Confidence 9999999999999999999999999999999999863
No 21
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=100.00 E-value=1.8e-35 Score=243.74 Aligned_cols=221 Identities=16% Similarity=0.187 Sum_probs=179.4
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeE-eechhhhhccCCCCCCCchhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSL-VANLAAANLFTPDHLHVPENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~-~~~~~~~~~l~~~~i~~~~~~~~~~~~~ 78 (239)
+|.||+|.+|+.+++.|+++||+++++.+ .+.+|+.+++++++ +++|++ +.+++....++++.++ ...+.+..++
T Consensus 62 i~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 138 (328)
T 3kzh_A 62 MSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYLAILDE-NGEMVSAIADMKSIGAMNTDFID--SKREIFENAE 138 (328)
T ss_dssp ECEECSSHHHHHHHHHHHHHTEECTTCEECTTCCCCEEEEEECT-TSCEEEEEEECGGGGGCCHHHHH--HTHHHHHTCS
T ss_pred EEEecCcHHHHHHHHHHHHcCCCccceEEeCCCCCeeEEEEEcC-CCCEEEEEEchhhhhhCCHHHHH--HHHHhhccCC
Confidence 57899999999999999999999998875 46689999998886 566765 3445555556554432 1236778999
Q ss_pred EEEEeccccccChHHHHHHHHHhhhCC---CCCh-hh-----HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHH
Q psy6977 79 YYYVSGFFLTVSPESILEVAKVALSCT---IRNI-NY-----LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALK 146 (239)
Q Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p~-----~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~ 146 (239)
++++++.. + +.+..+++ +++.+ ++|+ +. +.++++++ ++|++|+..|++....+.++++++++.
T Consensus 139 ~~~~~~~~---~-~~~~~l~~-a~~~~~~v~~D~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~ 213 (328)
T 3kzh_A 139 YTVLDSDN---P-EIMEYLLK-NFKDKTNFILDPVSAEKASWVKHLIKDFHTIKPNRHEAEILAGFPITDTDDLIKASNY 213 (328)
T ss_dssp EEEEESSC---H-HHHHHHHH-HHTTTSEEEEECCSHHHHHTSTTTGGGCSEECCBHHHHHHHHTSCCCSHHHHHHHHHH
T ss_pred EEEEeCCc---H-HHHHHHHH-HhhcCCcEEEEeCCHHHHHHHHHHhcCCcEEeCCHHHHHHHHCCCCCCHHHHHHHHHH
Confidence 99998643 3 66777777 66677 5565 21 22555665 999999999998644344677788888
Q ss_pred HhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHH
Q psy6977 147 ISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAA 226 (239)
Q Consensus 147 l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a 226 (239)
+.++ |++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+++++|+++|+++|
T Consensus 214 l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~ag~~~~l~~g~~~~~a~~~A~a~a 284 (328)
T 3kzh_A 214 FLGL------GIKKVFISLDADGIFYNDGVSCGKIKATEV---DVKNVTGAGDSFVAGLGYGYMNKMPIEDIVKFAMTMS 284 (328)
T ss_dssp HHHH------TCCEEEEECGGGCEEEECSSCEEEEEESSC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHh------CCCEEEEEeCCCCEEEEeCCceEEecCCCc---ccCCCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 8874 899999999999999999888899999988 7999999999999999999999999999999999999
Q ss_pred HHHHHhccCcCC
Q psy6977 227 QHIIQVSGCTLG 238 (239)
Q Consensus 227 ~~~~~~~G~~~~ 238 (239)
+.++++.|+..+
T Consensus 285 a~~v~~~G~~~~ 296 (328)
T 3kzh_A 285 NITISHEETIHP 296 (328)
T ss_dssp HHHHTSSSSSCT
T ss_pred HHHhcCCCCCCC
Confidence 999999998864
No 22
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=100.00 E-value=1.5e-35 Score=244.50 Aligned_cols=222 Identities=20% Similarity=0.247 Sum_probs=183.8
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|.+|+.+++.|+++||+++++.+ .+.+|+.+++++++ +++|+++.+++++..+++++++. ..+.+..+++
T Consensus 81 i~~vG~D~~G~~l~~~L~~~Gv~~~~v~~~~~~~T~~~~v~~~~-~g~~~~~~~~ga~~~l~~~~~~~--~~~~l~~~~~ 157 (331)
T 2fv7_A 81 VCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNN-EGQNIIVIVAGANLLLNTEDLRA--AANVISRAKV 157 (331)
T ss_dssp EEEEESSHHHHHHHHHHHTTTEECTTEEEESSSCCEEEEEEECT-TSCEEEEEECGGGGGCCHHHHHH--THHHHHHCSE
T ss_pred EEEECCChhHHHHHHHHHHcCCcceeeEecCCCCCceEEEEECC-CCCeEEEecCCccccCCHHHHHH--HHHhhccCCE
Confidence 57899999999999999999999999886 46689999988875 57787777777777777665532 1245778999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-hh----HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHh
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-NY----LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKIS 148 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p~----~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 148 (239)
+++++ ..+.+.+..+++.+++.+ ++|+ +. ..++++++ ++|++|+..|++....+.++++++++.+.
T Consensus 158 v~~~~---~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~ 234 (331)
T 2fv7_A 158 MVCQL---EITPATSLEALTMARRSGVKTLFNPAPAIADLDPQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLL 234 (331)
T ss_dssp EEECS---SSCHHHHHHHHHHHHHTTCEEEECCCSCCTTCCTHHHHTCSEEEEEHHHHHHHHSSCCCSHHHHHHHHHHHH
T ss_pred EEEec---CCCHHHHHHHHHHHHHcCCEEEEeCCcccccchHHHHhcCCEEEeCHHHHHHHhCCCCCChhHHHHHHHHHH
Confidence 99964 345688889999999888 5666 32 22666665 99999999999863333356777888888
Q ss_pred cCCCCCCCCceEEEEeeCCCcEEEEECC--eEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcC--CCHHHHHHHHHH
Q psy6977 149 NLPKQNPNRERITIITQGDKPIILSQNG--KTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKG--EPLSVCIECGVW 224 (239)
Q Consensus 149 ~~~~~~~~g~~~vvvt~G~~G~~~~~~~--~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g--~~~~~a~~~a~~ 224 (239)
++ |++.||||+|++|+++++++ +.++++++++ +++||+||||+|+|||++++++| +++++|+++|++
T Consensus 235 ~~------g~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~~~~~a~~~A~~ 305 (331)
T 2fv7_A 235 KR------GCQVVIITLGAEGCVVLSQTEPEPKHIPTEKV---KAVDTTGAGDSFVGALAFYLAYYPNLSLEDMLNRSNF 305 (331)
T ss_dssp TT------TCSEEEEECGGGCEEEEESSCCSCEEECCCCC---CCSCCTTHHHHHHHHHHHHHHHCTTSCHHHHHHHHHH
T ss_pred Hc------CCCEEEEEECCCceEEEECCCCceeEecCCCC---ccCCCCCchHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 74 89999999999999998887 7888888887 79999999999999999999999 999999999999
Q ss_pred HHHHHHHhccCcC
Q psy6977 225 AAQHIIQVSGCTL 237 (239)
Q Consensus 225 ~a~~~~~~~G~~~ 237 (239)
+|+.++++.|++.
T Consensus 306 ~aa~~v~~~G~~~ 318 (331)
T 2fv7_A 306 IAAVSVQAAGTQS 318 (331)
T ss_dssp HHHHHHTSSSGGG
T ss_pred HHHHHhCCCCCcc
Confidence 9999999999853
No 23
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=100.00 E-value=4.1e-35 Score=239.94 Aligned_cols=216 Identities=19% Similarity=0.211 Sum_probs=178.3
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCc--eeEeec--hhhhhccCCCCCCCchhhhccc
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKA--RSLVAN--LAAANLFTPDHLHVPENNKLIQ 75 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~--r~~~~~--~~~~~~l~~~~i~~~~~~~~~~ 75 (239)
+|.||+|.+|+.+++.|+++||+++++.+ .+.+|+.+++.+++ +++ |+++.+ .+++..+++++++. ..++
T Consensus 53 ~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~-~g~~~~~~~~~~~~~a~~~~~~~~~~~----~~~~ 127 (311)
T 2dcn_A 53 IAKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHY-PVPLKSESIYYRKGSAGSKLSPEDVDE----EYVK 127 (311)
T ss_dssp ECEEESSHHHHHHHHHHHHTTCBCTTCEEETTSCCCEEEEEESC-SSTTCEEEEEECTTCTGGGCCGGGCCH----HHHT
T ss_pred EEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEECC-CCCccceEEEecCcChhhhCChhhcCh----HHHc
Confidence 58899999999999999999999999886 45689998888775 455 665543 35567788777653 5678
Q ss_pred ceeEEEEeccccc---cChHHHHHHHHHhhhCCCCCh-------------hhHHHHhh--HH---hcCHHHHHHHHHHcC
Q psy6977 76 NAEYYYVSGFFLT---VSPESILEVAKVALSCTIRNI-------------NYLHHRFI--YL---VLIDFEALAFAKQQN 134 (239)
Q Consensus 76 ~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~g~~~~-------------p~~~~~~~--~~---~~n~~E~~~l~~~~~ 134 (239)
+++++|++|+.+. .+.+.+.++++.+++. ++|+ +.+.++++ ++ ++|++|+..|++.
T Consensus 128 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~-~~D~~~~~~~~~~~~~~~~~~~~l~~~~~dil~~N~~E~~~l~g~-- 204 (311)
T 2dcn_A 128 SADLVHSSGITLAISSTAKEAVYKAFEIASNR-SFDTNIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKIILGE-- 204 (311)
T ss_dssp TCSEEEEEHHHHHSCHHHHHHHHHHHHHCSSE-EEECCCCTTTSCHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHSC--
T ss_pred CCCEEEEeCcccccChHHHHHHHHHHHHHHHh-CcCccCchhhCChHHHHHHHHHHHhhcCCcEEECCHHHHHHHhCC--
Confidence 9999999987653 3346777888887754 3332 12336777 66 9999999999875
Q ss_pred CCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCC
Q psy6977 135 FQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEP 214 (239)
Q Consensus 135 ~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~ 214 (239)
++++++++.+.+ . ++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|++
T Consensus 205 ---~~~~~~~~~l~~------~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~ 271 (311)
T 2dcn_A 205 ---SDPDKAAKAFSD------Y-AEIIVMKLGPKGAIVYYDGKKYYSSGYQV---PVEDVTGAGDALGGTFLSLYYKGFE 271 (311)
T ss_dssp ---CCHHHHHHHHTT------T-EEEEEEEEETTEEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHTTTCC
T ss_pred ---CCHHHHHHHHHH------h-CCEEEEEECCCCcEEEeCCcEEEeCCccc---cccCCCCchHHHHHHHHHHHHcCCC
Confidence 678888888877 4 68999999999999999888889999988 7999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCcC
Q psy6977 215 LSVCIECGVWAAQHIIQVSGCTL 237 (239)
Q Consensus 215 ~~~a~~~a~~~a~~~~~~~G~~~ 237 (239)
+++|+++|+++|+.++++.|++.
T Consensus 272 ~~~a~~~a~~~aa~~v~~~G~~~ 294 (311)
T 2dcn_A 272 MEKALDYAIVASTLNVMIRGDQE 294 (311)
T ss_dssp HHHHHHHHHHHHHHHTTSSSSST
T ss_pred HHHHHHHHHHHHHHHhccCCCCC
Confidence 99999999999999999999874
No 24
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=100.00 E-value=1.5e-36 Score=250.13 Aligned_cols=217 Identities=17% Similarity=0.210 Sum_probs=167.1
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|.||+|.+|+.+++.|+++||+++++.+ .+.+|+.+++..+ +++|+++.+++++..++++++.. +.++++++
T Consensus 74 ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~v~~~--~g~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~ 147 (327)
T 3hj6_A 74 ISRLGADAFGNYLLDVLKGEQIITDGIQQDKERRTTIVYVSKS--TRTPDWLPYREADMYLQEDDIIF----ELIKRSKV 147 (327)
T ss_dssp ECEEESSHHHHHHHHHHHHTTCBCTTCEEESSSCCCEEEECCC--TTCCCEEEECSGGGGCCSCCCHH----HHHC--CE
T ss_pred EEEeCCCHHHHHHHHHHHHcCCCcccEEEcCCCCceEEEEEec--CCCccEEEecChhhhCChhhcCH----hHhccCCE
Confidence 57899999999999999999999999885 4568877665543 56777777777778887766542 57889999
Q ss_pred EEEeccccc--cChHHHHHHHHHhhhCC---CCCh---hh-----------HHHHhhHH---hcCHHHHHHHHHHcCCCc
Q psy6977 80 YYVSGFFLT--VSPESILEVAKVALSCT---IRNI---NY-----------LHHRFIYL---VLIDFEALAFAKQQNFQT 137 (239)
Q Consensus 80 ~~~~g~~~~--~~~~~~~~~~~~~~~~g---~~~~---p~-----------~~~~~~~~---~~n~~E~~~l~~~~~~~~ 137 (239)
+|++|+.+. .+.+.+.++++.+++.| ++|+ +. +.++++++ ++|++|+..|++.
T Consensus 148 v~~~g~~l~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~----- 222 (327)
T 3hj6_A 148 FHLSTFILSRKPARDTAIKAFNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGP----- 222 (327)
T ss_dssp EEEESHHHHSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCSSSCSHHHHHHHHTTCSEECCBHHHHHHHHTT-----
T ss_pred EEECchHhcCchhHHHHHHHHHHHHHCCCEEEEECCCchhhcCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCC-----
Confidence 999986543 34578889999999988 4444 32 22555655 9999999999986
Q ss_pred cCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHH
Q psy6977 138 EDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSV 217 (239)
Q Consensus 138 ~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~ 217 (239)
++++++++.++++ |++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+++++
T Consensus 223 ~~~~~~~~~l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~ag~~~~l~~g~~~~~ 293 (327)
T 3hj6_A 223 DSPENYVKRYLEL------GVKAVILTLGEEGVIASDGEEIIRIPAFSE---DAVDVTGAGDAFWSGFICGLLDGYTVKR 293 (327)
T ss_dssp SCSSGGGGGGTTT------TCSEEEEECSTTCEEEECSSCEEESCSSTT---C-----CCHHHHHHHHHHTTSSCSTTHH
T ss_pred CCHHHHHHHHHhC------CCCEEEEEECCCceEEEeCCeeEEcCCccc---ccCCCcChhHHHHHHHHHHHHcCCCHHH
Confidence 4455566666653 899999999999999999888999999987 8999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCcC
Q psy6977 218 CIECGVWAAQHIIQVSGCTL 237 (239)
Q Consensus 218 a~~~a~~~a~~~~~~~G~~~ 237 (239)
|+++|+++|+.++++.|++.
T Consensus 294 a~~~A~a~aa~~v~~~G~~~ 313 (327)
T 3hj6_A 294 SIKLGNGVAAFKIRGVGALS 313 (327)
T ss_dssp HHHHHHCCCSSCC-------
T ss_pred HHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999999864
No 25
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=100.00 E-value=6e-35 Score=239.20 Aligned_cols=217 Identities=18% Similarity=0.231 Sum_probs=177.1
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEE--EecCCCceeEeech--hhhhccCCCCCCCchhhhccc
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVL--ITDNGKARSLVANL--AAANLFTPDHLHVPENNKLIQ 75 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~--~~~~~~~r~~~~~~--~~~~~l~~~~i~~~~~~~~~~ 75 (239)
+|+||+|.+|+.+++.|+++||+++++.+ .+.+|+.+++. +++ +++|.++.+. +++..+++++++. ..++
T Consensus 53 i~~vG~D~~g~~~~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~~-~g~~~~~~~~~~~a~~~l~~~~~~~----~~~~ 127 (313)
T 2v78_A 53 IARVGNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPI-PMKSELVYYRKGSAGSRLSPEDINE----NYVR 127 (313)
T ss_dssp EEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCCEEEEEESSSS-TTCEEEEEECTTCSGGGCCGGGCCH----HHHH
T ss_pred EEEeCCCHHHHHHHHHHHHcCCcCceEEEcCCCCceEEEEEEecCC-CCCeeEEEeCCcChhHhCChhhCCH----HHhc
Confidence 47899999999999999999999999886 45689998887 665 5566655443 4567788777763 5678
Q ss_pred ceeEEEEeccccc---cChHHHHHHHHHhhhCCCCCh---h-----------hHHHHhh-----HHhcCHHHHHHHHHHc
Q psy6977 76 NAEYYYVSGFFLT---VSPESILEVAKVALSCTIRNI---N-----------YLHHRFI-----YLVLIDFEALAFAKQQ 133 (239)
Q Consensus 76 ~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~g~~~~---p-----------~~~~~~~-----~~~~n~~E~~~l~~~~ 133 (239)
+++++|++|+.+. .+.+.+.++++.+++. ++|+ + .+.++++ .+++|++|+..|++.
T Consensus 128 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~-~~D~~~~~~~~~~~~~~~~~~~~~l~~~d~~il~~N~~E~~~l~g~- 205 (313)
T 2v78_A 128 NSRLVHSTGITLAISDNAKEAVIKAFELAKSR-SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKILLDV- 205 (313)
T ss_dssp TSSEEEEEHHHHHHCHHHHHHHHHHHHHCSSE-EEECCCCGGGSSCHHHHHHHHHHHHHHSCEEEEEECHHHHHHHHSC-
T ss_pred CCCEEEEcCchhhcChHHHHHHHHHHHHHHHh-CcCCcCChhhcCCHHHHHHHHHHHHHhcCeeEEECcHHHHHHHhCC-
Confidence 9999999987653 3346777788877654 2332 1 1223444 348999999999875
Q ss_pred CCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCC
Q psy6977 134 NFQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGE 213 (239)
Q Consensus 134 ~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~ 213 (239)
++++++++.+.++ |++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+
T Consensus 206 ----~~~~~~~~~l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~~~~l~~g~ 272 (313)
T 2v78_A 206 ----TDPDEAYRKYKEL------GVKVLLYKLGSKGAIAYKDNVKAFKDAYKV---PVEDPTGAGDAMAGTFVSLYLQGK 272 (313)
T ss_dssp ----CCHHHHHHHHHHT------TEEEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTC
T ss_pred ----CCHHHHHHHHHhC------CCCEEEEEECCCCcEEeeCCcEEEeCCCcC---CccCCCCchHHHHHHHHHHHHcCC
Confidence 6788888888885 899999999999999998888889999887 799999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhccCcC
Q psy6977 214 PLSVCIECGVWAAQHIIQVSGCTL 237 (239)
Q Consensus 214 ~~~~a~~~a~~~a~~~~~~~G~~~ 237 (239)
++++|+++|+++|+.++++.|++.
T Consensus 273 ~~~~a~~~a~~~aa~~v~~~G~~~ 296 (313)
T 2v78_A 273 DIEYSLAHGIAASTLVITVRGDNE 296 (313)
T ss_dssp CHHHHHHHHHHHHHHHHTSSSSST
T ss_pred CHHHHHHHHHHHHHHHhccCCCCC
Confidence 999999999999999999999874
No 26
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=100.00 E-value=4.1e-34 Score=236.01 Aligned_cols=221 Identities=19% Similarity=0.224 Sum_probs=173.7
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC--CCCceeEEEEEecCCCceeEeech--hhhhccCCCCCCCchhhhcccc
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD--TEPTGTCAVLITDNGKARSLVANL--AAANLFTPDHLHVPENNKLIQN 76 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~--~~~t~~~~~~~~~~~~~r~~~~~~--~~~~~l~~~~i~~~~~~~~~~~ 76 (239)
+|.||+|.+|+++++.|+++||+++++.+. +.+|+.+++.++. ++.+.++.+. +++..+++++++. ..+++
T Consensus 64 i~~vG~D~~G~~l~~~L~~~gV~~~~v~~~~~~~~t~~~~v~~~~-~g~~~~~~~~~~~a~~~l~~~~~~~----~~~~~ 138 (332)
T 2qcv_A 64 IGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKS-PEECSILMYRQDVADLYLSPEEVNE----AYIRR 138 (332)
T ss_dssp EEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCCEEEEEEEE-TTEEEEEEECTTCGGGGCCGGGCCH----HHHTT
T ss_pred EEEeCCCHHHHHHHHHHHHcCCCCcceEecCCCCCceEEEEEEcC-CCCccEEEECCcchhhhCCHhHCCH----HHHcc
Confidence 478999999999999999999999998764 3488888877665 3444443333 3556777777653 45789
Q ss_pred eeEEEEeccccc--cChHHHHHHHHHhhhCC---CCCh---hhH-----------HHHhhHH---hcCHHHHHHHHHHcC
Q psy6977 77 AEYYYVSGFFLT--VSPESILEVAKVALSCT---IRNI---NYL-----------HHRFIYL---VLIDFEALAFAKQQN 134 (239)
Q Consensus 77 ~~~~~~~g~~~~--~~~~~~~~~~~~~~~~g---~~~~---p~~-----------~~~~~~~---~~n~~E~~~l~~~~~ 134 (239)
++++|++|+.+. .+.+.+..+++.+++.| ++|+ +.+ .++++++ ++|++|+..|++...
T Consensus 139 ~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~ 218 (332)
T 2qcv_A 139 SKLLLVSGTALSKSPSREAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENRTE 218 (332)
T ss_dssp EEEEEEEGGGGSSTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHHHCSEEEEEHHHHHHHTTCSS
T ss_pred CCEEEEeCccccCchhHHHHHHHHHHHHHCCCEEEEcCcCchhhcCCHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCc
Confidence 999999998654 23477888999999888 4444 221 2456665 999999999987522
Q ss_pred CCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEEC-CeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCC
Q psy6977 135 FQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQN-GKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGE 213 (239)
Q Consensus 135 ~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~-~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~ 213 (239)
.++..+.++.++++ |++.||||+|++|++++++ ++.++++++++ +++||+||||+|+|||++++++|+
T Consensus 219 --~~~~~~~~~~l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v---~vvdt~GAGDaf~a~~~~~l~~g~ 287 (332)
T 2qcv_A 219 --KGDNDETIRYLFKH------SPELIVIKHGVEGSFAYTKAGEAYRGYAYKT---KVLKTFGAGDSYASAFLYALISGK 287 (332)
T ss_dssp --CCCHHHHHHHHTTS------SCSEEEEECGGGCEEEEETTSCEEEECCBCC---CCSCCTTHHHHHHHHHHHHHHTTC
T ss_pred --CCCHHHHHHHHHHc------CCCEEEEEECCcceEEEecCCceEEcCCCCc---cccCCCCcHHHHHHHHHHHHHcCC
Confidence 24567778888774 8999999999999999988 66888998887 799999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhccCcC
Q psy6977 214 PLSVCIECGVWAAQHIIQVSGCTL 237 (239)
Q Consensus 214 ~~~~a~~~a~~~a~~~~~~~G~~~ 237 (239)
++++|+++|+++|+.++++.|++.
T Consensus 288 ~~~~a~~~A~~~aa~~v~~~G~~~ 311 (332)
T 2qcv_A 288 GIETALKYGSASASIVVSKHSSSD 311 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHC-----
T ss_pred CHHHHHHHHHHHHHHHHccCCCcc
Confidence 999999999999999999999863
No 27
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=9.4e-35 Score=238.44 Aligned_cols=222 Identities=17% Similarity=0.247 Sum_probs=175.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEee-chhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVA-NLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~-~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|.+|+++++.|+++||+++++...+.+|+.+++++++ +++|+++. ..+.+..++++.++.....+.+..+++
T Consensus 59 i~~vG~D~~G~~l~~~L~~~gV~~~~~~~~~~~T~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (317)
T 2nwh_A 59 IAPRGGDVTGEVVAEAARQAGVEDTPFTFLDRRTPSYTAILER-DGNLVIALADMDLYKLFTPRRLKVRAVREAIIASDF 137 (317)
T ss_dssp ECEEESSHHHHHHHHHHHHTTCEECCEEETTSCCCEEEEEECT-TSCEEEEEEECGGGGGCCHHHHTSHHHHHHHHHCSE
T ss_pred EEeecCCchHHHHHHHHHHcCCCCCCcccCCCCCceEEEEEcC-CCCEEEEEcchHHHhhCCHHHhhhhhhhhHhccCCE
Confidence 5889999999999999999999999955566799999998876 56666543 334455566654443111146788999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-h-h----HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHH
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-N-Y----LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKI 147 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p-~----~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l 147 (239)
+++++ .++.+.+..+++.+++.+ ++|+ + . +.++++++ ++|++|+..|++. +.++++++++.+
T Consensus 138 v~~~~---~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~---~~~~~~~~~~~l 211 (317)
T 2nwh_A 138 LLCDA---NLPEDTLTALGLIARACEKPLAAIAISPAKAVKLKAALGDIDILFMNEAEARALTGE---TAENVRDWPNIL 211 (317)
T ss_dssp EEEET---TSCHHHHHHHHHHHHHTTCCEEEECCSHHHHGGGTTTGGGCSEEEEEHHHHHHHHC--------CTTHHHHH
T ss_pred EEEeC---CCCHHHHHHHHHHHHhcCCeEEEeCCCHHHHHHHHHHhhhCeEecCCHHHHHHHhCC---ChhHHHHHHHHH
Confidence 99964 346788899999999888 5565 2 1 22555655 9999999999875 234556677778
Q ss_pred hcCCCCCCCCceEEEEeeCCCcEEEEECC-eEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHH
Q psy6977 148 SNLPKQNPNRERITIITQGDKPIILSQNG-KTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAA 226 (239)
Q Consensus 148 ~~~~~~~~~g~~~vvvt~G~~G~~~~~~~-~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a 226 (239)
.++ |++.||||+|++|+++++++ ..++++++++ +++||+||||+|+|||++++++|+++++|+++|+++|
T Consensus 212 ~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v---~~vdt~GAGDaf~a~~~~~l~~g~~~~~a~~~A~~~a 282 (317)
T 2nwh_A 212 RKA------GLSGGVVTRGASEVVAFNGTEKAILHPPLIR---EVKDVTGAGDAMASGYLAAIAEGKTIREALRQGAAAA 282 (317)
T ss_dssp HHT------TCCCEEEEETTTEEEEECSSCEEEECCCCSS---SCSCCCCSSHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHc------CCCEEEEEECCCcEEEEcCCCceEEeCCCCc---cccCCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 774 89999999999999998766 4678888887 8999999999999999999999999999999999999
Q ss_pred HHHHHhccCcCC
Q psy6977 227 QHIIQVSGCTLG 238 (239)
Q Consensus 227 ~~~~~~~G~~~~ 238 (239)
+.++++.|++.+
T Consensus 283 a~~v~~~G~~~~ 294 (317)
T 2nwh_A 283 AITVQSSFATSQ 294 (317)
T ss_dssp HHHHSSTTCCGG
T ss_pred HHHHcCCCCCCC
Confidence 999999998753
No 28
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=100.00 E-value=4.7e-35 Score=238.32 Aligned_cols=204 Identities=21% Similarity=0.236 Sum_probs=175.7
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.||+|.+|+.+++.|+++||+++++...+.+|+.+++++++ +++|+++.+++++..+++++++. ..+.++.++++
T Consensus 59 i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~T~~~~~~~~~-~g~~~~~~~~~a~~~l~~~~~~~--~~~~~~~~~~v 135 (299)
T 3ikh_A 59 IAATGNDSNGAWIRQQIKNEPLMLLPDGHFNQHSDTSIILNSA-DGDNAIITTTAAADTFSLDEMIP--HMADAVAGDIL 135 (299)
T ss_dssp ECCCCSSHHHHHHHHHGGGSSCEEESSSCCSSCCEEEEEECSS-SCSCEEEEECHHHHHCCHHHHGG--GGTTCCTTCEE
T ss_pred EEEECCCHHHHHHHHHHHHcCCceeeeEecCCCCcEEEEEEcC-CCCeEEEEeCCccccCCHHHHHH--HHhhhccCCEE
Confidence 5889999999999999999999999997666799999888876 67777777788888888776642 23567899999
Q ss_pred EEeccccccChHHHHHHHHHhhhCC---CCCh----hhHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhcC
Q psy6977 81 YVSGFFLTVSPESILEVAKVALSCT---IRNI----NYLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISNL 150 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~----p~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~ 150 (239)
++++. .+.+.+..+++.+++.| ++|+ +.+.++++++ ++|++|+..|++ +
T Consensus 136 ~~~g~---~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~ll~~~dil~~N~~E~~~l~g------------------~ 194 (299)
T 3ikh_A 136 LQQGN---FSLDKTRALFQYARSRGMTTVFNPSPVNPDFCHLWPLIDIAVVNESEAELLQP------------------Y 194 (299)
T ss_dssp EECSC---SCHHHHHHHHHHHHHTTCEEEECCCSCCGGGGGCGGGCSEEEEEHHHHHHHCC------------------C
T ss_pred EECCC---CCHHHHHHHHHHHHHcCCEEEEccccchhhHHHHHhhCCEEEecHHHHHHHhc------------------C
Confidence 99753 45788899999999888 6666 2344667766 999999988753 2
Q ss_pred CCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhH-HHHHHHHcCCCHHH-HHHHHHHHHHH
Q psy6977 151 PKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVG-GFLSQLIKGEPLSV-CIECGVWAAQH 228 (239)
Q Consensus 151 ~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~a-g~~~~l~~g~~~~~-a~~~a~~~a~~ 228 (239)
|++.||||+|++|++++++++.+++|++++ +++||+||||+|+| ||++++++|+++++ |+++|+++|+.
T Consensus 195 ------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaf~a~~~~~~l~~g~~~~~~a~~~a~~~aa~ 265 (299)
T 3ikh_A 195 ------GVKTLVITQGAAGAWLVQEGQRQFCPAVPA---EALDTTGAGDTFLAVMLASALLRGVAPDALALAHASRAAAI 265 (299)
T ss_dssp ------SCSEEEEECGGGCEEEECSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHH
T ss_pred ------CCCEEEEEECCCceEEEeCCceEEeCCCCC---ccCCCCCchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 789999999999999999888999999988 89999999999999 99999999999999 99999999999
Q ss_pred HHHhccCcC
Q psy6977 229 IIQVSGCTL 237 (239)
Q Consensus 229 ~~~~~G~~~ 237 (239)
++++.|++.
T Consensus 266 ~v~~~G~~~ 274 (299)
T 3ikh_A 266 TVSRRGTLS 274 (299)
T ss_dssp HHHSSSSTT
T ss_pred HhCCCcccc
Confidence 999999875
No 29
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=100.00 E-value=2.9e-34 Score=234.75 Aligned_cols=212 Identities=16% Similarity=0.170 Sum_probs=171.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeech--hhhhccCCCCCCCchhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANL--AAANLFTPDHLHVPENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~--~~~~~l~~~~i~~~~~~~~~~~~~ 78 (239)
+|.||+|.+|+.+++.|+++||+++++.+.+.+|+.+++.++. +++|.++.+. +++..+++++++. ..+++++
T Consensus 53 ~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~t~~~~~~~~~-~g~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~ 127 (309)
T 1v1a_A 53 VGRVGEDELGAMVEERLRAEGVDLTHFRRAPGFTGLYLREYLP-LGQGRVFYYRKGSAGSALAPGAFDP----DYLEGVR 127 (309)
T ss_dssp EEEECSSHHHHHHHHHHHHHTCBCTTEEECSSCCCEEEEEECT-TSCEEEEEECTTCSGGGCCTTSSCG----GGGTTCS
T ss_pred EEEeCCCHHHHHHHHHHHHcCCCCceEEEcCCCCEEEEEEECC-CCCceEEEeCCCChhhhCCHhhCCh----hHhcCCC
Confidence 4789999999999999999999999988643399998887765 4566655432 4567788877764 5678999
Q ss_pred EEEEeccccc---cChHHHHHHHHHhhhCC---CCCh---h----------hHHHHhhHH---hcCHHHHHHHHHHcCCC
Q psy6977 79 YYYVSGFFLT---VSPESILEVAKVALSCT---IRNI---N----------YLHHRFIYL---VLIDFEALAFAKQQNFQ 136 (239)
Q Consensus 79 ~~~~~g~~~~---~~~~~~~~~~~~~~~~g---~~~~---p----------~~~~~~~~~---~~n~~E~~~l~~~~~~~ 136 (239)
++|++|+.+. .+.+.+.++++.+++.+ .+|+ + .+.++++++ ++|++|+..|++.
T Consensus 128 ~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~---- 203 (309)
T 1v1a_A 128 FLHLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPEEARGFLERALPGVDLLFLSEEEAELLFGR---- 203 (309)
T ss_dssp EEEEETTGGGSCHHHHHHHHHHHHHHHTTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEEEEHHHHHHHHSS----
T ss_pred EEEEeCchhccCchHHHHHHHHHHHHHHcCCEEEEeCCCCcccCCHHHHHHHHHHHHHhCCEEECcHHHHHHHhCC----
Confidence 9999998763 33467888999998887 4444 2 122556655 9999999999864
Q ss_pred ccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEEC-CeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCH
Q psy6977 137 TEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQN-GKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPL 215 (239)
Q Consensus 137 ~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~-~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~ 215 (239)
+ +++++ + .|++.||||+|++|+++ .+ ++.+++|++++ +++||+||||+|+|||++++++|+++
T Consensus 204 -~--~~~~~---~------~g~~~vvvt~G~~G~~~-~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~ 267 (309)
T 1v1a_A 204 -V--EEALR---A------LSAPEVVLKRGAKGAWA-FVDGRRVEGSAFAV---EAVDPVGAGDAFAAGYLAGAVWGLPV 267 (309)
T ss_dssp -H--HHHHH---H------TCCSEEEEECGGGCEEE-EETTEEEECCCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCH
T ss_pred -H--HHHHH---h------cCCCEEEEEecCCCeeE-ecCCcEEEeCCCCC---CcCCCCCchHHHHHHHHHHHHcCCCH
Confidence 2 44443 3 38999999999999998 65 67888888887 79999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCcC
Q psy6977 216 SVCIECGVWAAQHIIQVSGCTL 237 (239)
Q Consensus 216 ~~a~~~a~~~a~~~~~~~G~~~ 237 (239)
++|+++|+++|+.++++.|++.
T Consensus 268 ~~a~~~a~~~aa~~v~~~G~~~ 289 (309)
T 1v1a_A 268 EERLRLANLLGASVAASRGDHE 289 (309)
T ss_dssp HHHHHHHHHHHHHHHTSSTTTT
T ss_pred HHHHHHHHHHHHHHHcCCCCCc
Confidence 9999999999999999999874
No 30
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=100.00 E-value=1.4e-34 Score=238.57 Aligned_cols=223 Identities=13% Similarity=0.100 Sum_probs=176.3
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCc--hhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVP--ENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~--~~~~~~~~~~ 78 (239)
+|+||+ .+|+++++.|+++||+++++.+.+ .|+++++++++ + .++++...++ .+++++++.. .+.+.+++++
T Consensus 76 i~~vG~-~~G~~l~~~L~~~gV~~~~v~~~~-~t~~~~~~v~~-~-~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~ 149 (330)
T 2jg1_A 76 SGFIGG-ELGQFIAKKLDHADIKHAFYNIKG-ETRNCIAILHE-G-QQTEILEQGP--EIDNQEAAGFIKHFEQMMEKVE 149 (330)
T ss_dssp EEEEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEEEET-T-EEEEEEECCC--BCCHHHHHHHHHHHHHHGGGCS
T ss_pred EEEecc-hhHHHHHHHHHHCCCceeEEEccC-CCeeEEEEEeC-C-CcEEEECCCC--CCCHHHHHHHHHHHHHhcCCCC
Confidence 478996 699999999999999999998754 47888877765 4 6665554432 4554433311 1113468999
Q ss_pred EEEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHhh---HH---hcCHHHHHHHHHHcCC-CccCHHHHHH
Q psy6977 79 YYYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRFI---YL---VLIDFEALAFAKQQNF-QTEDLHAIAL 145 (239)
Q Consensus 79 ~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~~---~~---~~n~~E~~~l~~~~~~-~~~~~~~~~~ 145 (239)
+++++|+.+. .+.+.+.++++.+++.| ++|+ +.+.++++ ++ ++|++|+..|++.... +.++++++++
T Consensus 150 ~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~l~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~ 229 (330)
T 2jg1_A 150 AVAISGSLPKGLNQDYYAQIIERCQNKGVPVILDCSGATLQTVLENPYKPTVIKPNISELYQLLNQPLDESLESLKQAVS 229 (330)
T ss_dssp EEEEESCCCBTSCTTHHHHHHHHHHTTTCCEEEECCHHHHHHHHTSSSCCSEECCBHHHHHHHTTSCCCCCHHHHHHHHH
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCcHHHHHHHhccCCceEEEeCHHHHHHHhCCCCCCCHHHHHHHHH
Confidence 9999987664 55678899999999888 6676 34556665 34 9999999999875321 2235666666
Q ss_pred HHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHH
Q psy6977 146 KISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWA 225 (239)
Q Consensus 146 ~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~ 225 (239)
.+.++ |++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+++++|+++|+++
T Consensus 230 ~l~~~------g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~~~~l~~g~~l~~al~~A~a~ 300 (330)
T 2jg1_A 230 QPLFE------GIEWIIVSLGAQGAFAKHNHTFYRVNIPTI---SVLNPVGSGDSTVAGITSAILNHENDHDLLKKANTL 300 (330)
T ss_dssp SGGGT------TCSEEEEECGGGCEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHc------CCCEEEEeecCCceEEEeCCCEEEEeCCCc---cccCCCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 66664 899999999999999999888889999887 899999999999999999999999999999999999
Q ss_pred HHHHHHhccCcCC
Q psy6977 226 AQHIIQVSGCTLG 238 (239)
Q Consensus 226 a~~~~~~~G~~~~ 238 (239)
|+.++++.|++.|
T Consensus 301 aa~~v~~~G~~~~ 313 (330)
T 2jg1_A 301 GMLNAQEAQTGYV 313 (330)
T ss_dssp HHHHHTSSSSSCC
T ss_pred HHHHhcCcCCCCC
Confidence 9999999998754
No 31
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=1.3e-33 Score=231.07 Aligned_cols=213 Identities=22% Similarity=0.285 Sum_probs=176.6
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|.+|+.+++.|+++|| ++.+ .+.+|+.+++++++ +++|+++.+++++..+++++++ .+.++.+++
T Consensus 72 i~~vG~D~~G~~l~~~L~~~gV---~v~~~~~~~T~~~~~~~~~-~g~~~~~~~~ga~~~l~~~~~~----~~~~~~~~~ 143 (311)
T 1vm7_A 72 VTCIGNDDYSDLLIENYEKLGI---TGYIRVSLPTGRAFIEVDK-TGQNRIIIFPGANAELKKELID----WNTLSESDI 143 (311)
T ss_dssp EEEECSSHHHHHHHHHHHHTTE---EEEEECSSCCCEEEEEECT-TSCEEEEEECGGGGGCCGGGCC----HHHHTTCSE
T ss_pred EEEECCChHHHHHHHHHHHCCC---EEEEcCCCCCeEEEEEECC-CCCEEEEEecCccccCCHHHhC----hhhcccCCE
Confidence 4789999999999999999999 6665 56699999998875 6778887777877788887775 256789999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh-h---hHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhc
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI-N---YLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKISN 149 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p---~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~ 149 (239)
+++++. .+.+.+..+ +++.+ ++|+ + ...++++++ ++|++|+..|++....+.+++.++++.+.+
T Consensus 144 v~~~~~---~~~~~~~~~---a~~~~~~v~~Dp~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~ 217 (311)
T 1vm7_A 144 LLLQNE---IPFETTLEC---AKRFNGIVIFDPAPAQGINEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFLE 217 (311)
T ss_dssp EEECSS---SCHHHHHHH---HHHCCSEEEECCCSCTTCCGGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHHHHHHHHH
T ss_pred EEEeCC---CCHHHHHHH---HHHcCCEEEEeCcchhhhhHHHHhhCCEEeCCHHHHHHHhCCCCCChhHHHHHHHHHHH
Confidence 999653 344444333 66666 5665 3 233667766 999999999998643345678888888888
Q ss_pred CCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy6977 150 LPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHI 229 (239)
Q Consensus 150 ~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~ 229 (239)
+ |++.|++|+|++|++++++++.++++++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.+
T Consensus 218 ~------g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~ 288 (311)
T 1vm7_A 218 L------GVKNVIVKLGDKGVLLVNKNEKKHFPTFKV---KAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFGTAAAAIS 288 (311)
T ss_dssp T------TCSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred c------CCCEEEEEECCCCeEEEeCCceEEecCCCc---ccCCCCccHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 5 899999999999999999888888988887 7999999999999999999999999999999999999999
Q ss_pred HHhccCc
Q psy6977 230 IQVSGCT 236 (239)
Q Consensus 230 ~~~~G~~ 236 (239)
+++.|++
T Consensus 289 v~~~G~~ 295 (311)
T 1vm7_A 289 VTRLGAQ 295 (311)
T ss_dssp TTSSSSG
T ss_pred hCcCCcc
Confidence 9999986
No 32
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=100.00 E-value=3.7e-34 Score=234.06 Aligned_cols=223 Identities=17% Similarity=0.145 Sum_probs=171.8
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEE-EecCCCceeEeechhhhhccCCCCCCCc--hhhhcccce
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVL-ITDNGKARSLVANLAAANLFTPDHLHVP--ENNKLIQNA 77 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~-~~~~~~~r~~~~~~~~~~~l~~~~i~~~--~~~~~~~~~ 77 (239)
+|.||+| +|+++++.|+++||+++++.+.+ .|++++++ +++ +++|+++..+++ .+++++++.. ...+.+++
T Consensus 58 i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~~~~~-~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~- 131 (309)
T 3cqd_A 58 IFPAGGA-TGEHLVSLLADENVPVATVEAKD-WTRQNLHVHVEA-SGEQYRFVMPGA--ALNEDEFRQLEEQVLEIESG- 131 (309)
T ss_dssp EEEECHH-HHHHHHHHHHHTTCCEEEEECSS-CCCCCEEEEETT-TCCEEEEECCCC--CCCHHHHHHHHHHHHTSCTT-
T ss_pred EEEecCc-hHHHHHHHHHHcCCCceeEEcCC-CCeeEEEEEEcC-CCCEEEEEcCCC--CCCHHHHHHHHHHHHHhhcC-
Confidence 4789998 99999999999999999998754 46666666 665 566776655442 3444433210 11234677
Q ss_pred eEEEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHh-h----HHhcCHHHHHHHHHHcCCCccCHHHHHHH
Q psy6977 78 EYYYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRF-I----YLVLIDFEALAFAKQQNFQTEDLHAIALK 146 (239)
Q Consensus 78 ~~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~-~----~~~~n~~E~~~l~~~~~~~~~~~~~~~~~ 146 (239)
++++++|+.+. .+.+.+.++++.+++.| .+|+ +.+.+.+ + .+++|++|+..|++....+.+++.++++.
T Consensus 132 ~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~ 211 (309)
T 3cqd_A 132 AILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGEALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQE 211 (309)
T ss_dssp CEEEEESCCCTTCCHHHHHHHHHHHHTTTCEEEEECCHHHHHHHTTTCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHH
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHcCCeEEEECChHHHHHHHHhCCCEEEeeCHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 99999987654 45688899999999888 5666 3333332 2 23999999999998644344567788888
Q ss_pred HhcCCCCCCCC-ceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHH
Q psy6977 147 ISNLPKQNPNR-ERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWA 225 (239)
Q Consensus 147 l~~~~~~~~~g-~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~ 225 (239)
+.++ | ++.|++|+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+++++|+++|+++
T Consensus 212 l~~~------g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~ 282 (309)
T 3cqd_A 212 IVNS------GKAKRVVVSLGPQGALGVDSENCIQVVPPPV---KSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAA 282 (309)
T ss_dssp HHHT------TSBSCEEEECGGGCEEEECSSCEEEECCCSC---CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHc------CCCCEEEEEecCCceEEEECCceEEEeCCcc---ccCCCcCcHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 8885 8 89999999999999998888888998887 899999999999999999999999999999999999
Q ss_pred HHHHHHhccCcCC
Q psy6977 226 AQHIIQVSGCTLG 238 (239)
Q Consensus 226 a~~~~~~~G~~~~ 238 (239)
|+.++++.|++.|
T Consensus 283 aa~~~~~~G~~~~ 295 (309)
T 3cqd_A 283 GSAATLNQGTRLC 295 (309)
T ss_dssp HHHHTC-----CC
T ss_pred HHHHHcCcCCCCC
Confidence 9999999998765
No 33
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=100.00 E-value=7.5e-34 Score=232.55 Aligned_cols=215 Identities=13% Similarity=0.154 Sum_probs=171.1
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|.+|+++++.|+++||+++++.+. +.+|++++++++..+++|+++.++++...+++++++. ..++++++
T Consensus 74 ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~~~~~~~~~~~~~~----~~l~~~~~ 149 (312)
T 2hlz_A 74 MGSMAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVSATDFEK----VDLTQFKW 149 (312)
T ss_dssp EEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCEEEEEEETTTCCEEEEEECCCCCCCCHHHHHT----SCGGGEEE
T ss_pred EEEecCchHHHHHHHHHHHcCCCCccceeccCCCCCeEEEEEECCCCceEEEecCCccccCCHHHhhH----hhhccCCE
Confidence 478999999999999999999999988865 5678888887764467888877766666666655432 35679999
Q ss_pred EEEeccccccChHHHHHHHHHhhhC--------C---CCCh----hhHHHHhhHH---hcCHHHHHHHHHHcCCCccCHH
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSC--------T---IRNI----NYLHHRFIYL---VLIDFEALAFAKQQNFQTEDLH 141 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~--------g---~~~~----p~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~ 141 (239)
++++++. ++.+.++++.+++. + .+|+ +.+.++++++ ++|++|+..+ +. ++++
T Consensus 150 v~~~~~~----~~~~~~~~~~a~~~~~~~~~~~~~~v~~d~~~~~~~~~~~l~~~dil~~n~~ea~~l-g~-----~~~~ 219 (312)
T 2hlz_A 150 IHIEGRN----ASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKPREELFQLFGYGDVVFVSKDVAKHL-GF-----QSAE 219 (312)
T ss_dssp EEEECSS----HHHHHHHHHHHHHHHTTSCGGGCCEEEEEECSCCGGGGGGGGSSSEEEECHHHHHHT-TC-----CSHH
T ss_pred EEEeccC----HHHHHHHHHHHHHhcccccCCCCeEEEEEcccchHHHHHHHhcCCEEEEcHHHHHHc-CC-----CCHH
Confidence 9998763 45666777777665 4 3444 2345677766 9999999876 42 5778
Q ss_pred HHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEEC-CeEEEEecc-CCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHH
Q psy6977 142 AIALKISNLPKQNPNRERITIITQGDKPIILSQN-GKTTEFPVQ-RLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCI 219 (239)
Q Consensus 142 ~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~-~~~~~~~~~-~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~ 219 (239)
++++.+.++.. .| +.||||+|++|++++++ ++.+++|++ ++ +++||+||||+|+|||++++++|+++++|+
T Consensus 220 ~~~~~l~~~~~---~g-~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~---~vvdt~GAGDaf~a~~~~~l~~g~~~~~a~ 292 (312)
T 2hlz_A 220 EALRGLYGRVR---KG-AVLVCAWAEEGADALGPDGKLLHSDAFPPP---RVVDTLGAGDTFNASVIFSLSQGRSVQEAL 292 (312)
T ss_dssp HHHHHHGGGSC---TT-CEEEEECGGGCEEEECTTCCEEEECCCCCS---SCCCCTTHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHhcC---CC-CEEEEEecccCeEEEccCCCEEECCCCCCC---CcccCCCchHHHHHHHHHHHHcCCCHHHHH
Confidence 88888887633 24 89999999999999875 557788874 44 799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCc
Q psy6977 220 ECGVWAAQHIIQVSGCT 236 (239)
Q Consensus 220 ~~a~~~a~~~~~~~G~~ 236 (239)
++|+++|+.++++.|+.
T Consensus 293 ~~a~~~aa~~v~~~G~~ 309 (312)
T 2hlz_A 293 RFGCQVAGKKCGLQGFD 309 (312)
T ss_dssp HHHHHHHHHHHTSSSSG
T ss_pred HHHHHHHHHHHhhcCcc
Confidence 99999999999999974
No 34
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=100.00 E-value=2.3e-33 Score=228.74 Aligned_cols=208 Identities=22% Similarity=0.233 Sum_probs=171.3
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+|.+|+.+++.|+++||+++++.+ ++.+|+.+++++++ +++|+++.+.+++..+++++++. .++++
T Consensus 62 i~~vG~D~~g~~i~~~l~~~gv~~~~~~~~~~~~T~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 133 (302)
T 2c4e_A 62 LSCVGYDFKNSGYERYLKNLDINISKLYYSEEEETPKAWIFTDK-DNNQITFFLWGAAKHYKELNPPN-------FNTEI 133 (302)
T ss_dssp ECEECTTTTTSHHHHHHHHTTCBCTTCEECSSSCCCEEEEEECS-SCCEECCEECGGGGGGGGCCCCC-------CCEEE
T ss_pred EEEEeCCCchHHHHHHHHHcCCcccceEeeCCCCCceEEEEECC-CCCEEEEEeCChhhhCCHhhcCc-------ccCCE
Confidence 58899999999999999999999998775 45689999988875 66777777777777788777652 68999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC--CCCh-hh--------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHH
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT--IRNI-NY--------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIAL 145 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g--~~~~-p~--------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~ 145 (239)
+|+++.. ++.+..+++.+++.| ++|+ +. +.++++++ ++|++|+..|++... .+..
T Consensus 134 v~~~~~~----~~~~~~~~~~a~~~g~v~~D~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~---~~~~---- 202 (302)
T 2c4e_A 134 VHIATGD----PEFNLKCAKKAYGNNLVSFDPGQDLPQYSKEMLLEIIEHTNFLFMNKHEFERASNLLN---FEID---- 202 (302)
T ss_dssp EEECSSC----HHHHHHHHHHHBTTBEEEECCGGGGGGCCHHHHHHHHHTCSEEEEEHHHHHHHHHHHT---CCHH----
T ss_pred EEEeCCC----cHHHHHHHHHHHhcCCEEEeCchhhhhhhHHHHHHHHhcCCEEEcCHHHHHHHhCCCC---ccHH----
Confidence 9997532 378888999988776 5555 21 23566665 999999999998632 1211
Q ss_pred HHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCC-cccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHH
Q psy6977 146 KISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAES-VVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224 (239)
Q Consensus 146 ~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~-vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~ 224 (239)
.+++ . ++.||||+|++|++++++++.+++|++++ + ++||+||||+|+|||++++++|+++++|+++|++
T Consensus 203 ~l~~------~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~~vdt~GAGDaf~a~~~~~l~~g~~~~~a~~~a~~ 272 (302)
T 2c4e_A 203 DYLE------R-VDALIVTKGSKGSVIYTKDKKIEIPCIKA---GKVIDPTGAGDSYRAGFLSAYVKGYDLEKCGLIGAA 272 (302)
T ss_dssp HHHT------T-CSEEEEECGGGCEEEECSSCEEEECCCCC---SCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHh------c-CCEEEEEECCCceEEEeCCcEEEeCCccC---CcCCcCCCchHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 4555 3 58999999999999998888888998887 6 9999999999999999999999999999999999
Q ss_pred HHHHHHHhccCcC
Q psy6977 225 AAQHIIQVSGCTL 237 (239)
Q Consensus 225 ~a~~~~~~~G~~~ 237 (239)
+|+.++++.|++.
T Consensus 273 ~aa~~~~~~G~~~ 285 (302)
T 2c4e_A 273 TASFVVEAKGCQT 285 (302)
T ss_dssp HHHHHTTSSSSST
T ss_pred HHHHHHccccccc
Confidence 9999999999863
No 35
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=100.00 E-value=1.1e-33 Score=232.68 Aligned_cols=223 Identities=13% Similarity=0.142 Sum_probs=175.9
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCc--hhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVP--ENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~--~~~~~~~~~~ 78 (239)
+|.||+ .+|+++++.|+++||+++++.+.+ +|+++++++++ + +++++...++ .+++++++.. .+.+.+++++
T Consensus 58 ~~~vG~-~~G~~i~~~L~~~gV~~~~v~~~~-~t~~~~~~~~~-~-~~~~~~~~g~--~l~~~~~~~~~~~~~~~~~~~~ 131 (323)
T 2f02_A 58 TGVLGG-FHGAFIANELKKANIPQAFTSIKE-ETRDSIAILHE-G-NQTEILEAGP--TVSPEEISNFLENFDQLIKQAE 131 (323)
T ss_dssp EEEEEH-HHHHHHHHHHHHTTCCBCCEEESS-CCEEEEEEEET-T-EEEEEEECCC--BCCHHHHHHHHHHHHHHHTTCS
T ss_pred EEEecc-chHHHHHHHHHHCCCceeEEEcCC-CCeeEEEEEcC-C-CeEEEECCCC--CCCHHHHHHHHHHHHHhccCCC
Confidence 478997 599999999999999999988755 57777777765 4 6666554442 4555443321 1123568999
Q ss_pred EEEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHhh---HH---hcCHHHHHHHHHHcCC-Cc-cCHHHHH
Q psy6977 79 YYYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRFI---YL---VLIDFEALAFAKQQNF-QT-EDLHAIA 144 (239)
Q Consensus 79 ~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~~---~~---~~n~~E~~~l~~~~~~-~~-~~~~~~~ 144 (239)
+++++|+.+. .+.+.+..+++.+++.| ++|+ +.+.++++ ++ ++|.+|+..|++.... +. +++.+++
T Consensus 132 ~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~ 211 (323)
T 2f02_A 132 IVTISGSLAKGLPSDFYQELVQKAHAQEVKVLLDTSGDSLRQVLQGPWKPYLIKPNLEELEGLLGQDFSENPLAAVQTAL 211 (323)
T ss_dssp EEEEESCCCBTSCTTHHHHHHHHHHHTTCEEEEECCTHHHHHHHHSSCCCSEECCBHHHHHHHHTCCCCSSCHHHHHHHH
T ss_pred EEEEECCCCCCCChHHHHHHHHHHHHCCCEEEEECChHHHHHHHhccCCCeEEecCHHHHHHHhCCCCCCCcHHHHHHHH
Confidence 9999987664 45578889999999888 6676 34556664 44 9999999999986321 12 3455666
Q ss_pred HHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHH
Q psy6977 145 LKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224 (239)
Q Consensus 145 ~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~ 224 (239)
+.+.++ |++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+++++|+++|++
T Consensus 212 ~~l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~a~~~~~l~~g~~~~~a~~~A~~ 282 (323)
T 2f02_A 212 TKPMFA------GIEWIVISLGKDGAIAKHHDQFYRVKIPTI---QAKNPVGSGDATIAGLAYGLAKDAPAAELLKWGMA 282 (323)
T ss_dssp TSGGGT------TCSEEEEECGGGCEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHc------CCCEEEEeecCCceEEEeCCCEEEEcCCCc---cccCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 666664 899999999999999999888889999887 89999999999999999999999999999999999
Q ss_pred HHHHHHHhccCcCC
Q psy6977 225 AAQHIIQVSGCTLG 238 (239)
Q Consensus 225 ~a~~~~~~~G~~~~ 238 (239)
+|+.++++.|+..|
T Consensus 283 ~aa~~v~~~G~~~~ 296 (323)
T 2f02_A 283 AGMANAQERMTGHV 296 (323)
T ss_dssp HHHHHHHSSSSSCC
T ss_pred HHHHHHcCCCcCCC
Confidence 99999999998754
No 36
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=100.00 E-value=7.6e-34 Score=233.33 Aligned_cols=219 Identities=16% Similarity=0.214 Sum_probs=173.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEE-ecCCCCceeEEEEEecCCCc--eeEeechhhhhccCCCCCCC--chhhhccc
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQ-HHDTEPTGTCAVLITDNGKA--RSLVANLAAANLFTPDHLHV--PENNKLIQ 75 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v-~~~~~~t~~~~~~~~~~~~~--r~~~~~~~~~~~l~~~~i~~--~~~~~~~~ 75 (239)
+|.||+| +|+.+++.|+++||+++++ ...+ +|+.++++++ +++ |+++...+ ..+++++++. ..+.+.++
T Consensus 59 i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~~-~t~~~~~~~~--~g~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~ 132 (320)
T 3ie7_A 59 LGIAGSD-NLDKLYAILKEKHINHDFLVEAGT-STRECFVVLS--DDTNGSTMIPEAG--FTVSQTNKDNLLKQIAKKVK 132 (320)
T ss_dssp EEEEEST-THHHHHHHHHHTTCCBCCEEETTC-CCEEEEEEEE--TTCSCCEEEECCC--CCCCHHHHHHHHHHHHHHCC
T ss_pred EEEecCc-hHHHHHHHHHHcCCceEEEEecCC-CCceEEEEEE--CCCceeEEEeCCC--CCCCHHHHHHHHHHHHHHhc
Confidence 4789998 9999999999999999999 4544 8999998887 445 67665544 3454443331 11235678
Q ss_pred ceeEEEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHhh-HH---hcCHHHHHHHHHHcCCCccCHHHHHH
Q psy6977 76 NAEYYYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRFI-YL---VLIDFEALAFAKQQNFQTEDLHAIAL 145 (239)
Q Consensus 76 ~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~~-~~---~~n~~E~~~l~~~~~~~~~~~~~~~~ 145 (239)
++++++++|+.+. .+.+.+.++++.+++.| ++|+ ..+++.++ ++ ++|++|+..|++.. ...-.+.+.
T Consensus 133 ~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~l~~~l~~~~dil~~N~~E~~~l~g~~---~~~~~~~~~ 209 (320)
T 3ie7_A 133 KEDMVVIAGSPPPHYTLSDFKELLRTVKATGAFLGCDNSGEYLNLAVEMGVDFIKPNEDEVIAILDEK---TNSLEENIR 209 (320)
T ss_dssp TTCEEEEESCCCTTCCHHHHHHHHHHHHHHTCEEEEECCHHHHHHHHHHCCSEECCBTTGGGGGSCTT---CCCHHHHHH
T ss_pred CCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCEEEEECChHHHHHHHhcCCeEEeeCHHHHHHHhCCC---cCCCHHHHH
Confidence 9999999998654 55688999999999888 6676 44555554 44 99999999988762 121223333
Q ss_pred HHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHH
Q psy6977 146 KISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWA 225 (239)
Q Consensus 146 ~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~ 225 (239)
.+.+ . ++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+++++|+++|+++
T Consensus 210 ~~~~------~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~~~~l~~g~~~~~a~~~A~a~ 279 (320)
T 3ie7_A 210 TLAE------K-IPYLVVSLGAKGSICAHNGKLYQVIPPKV---QERNDTGAGDVFVGAFIAGLAMNMPITETLKVATGC 279 (320)
T ss_dssp HHTT------T-CSEEEEECGGGCEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHh------h-CCEEEEEcCCCceEEEeCCcEEEEeCCcc---CCCCCcCchHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 4444 2 68999999999999999999999999988 899999999999999999999999999999999999
Q ss_pred HHHHHHhccCcCC
Q psy6977 226 AQHIIQVSGCTLG 238 (239)
Q Consensus 226 a~~~~~~~G~~~~ 238 (239)
|+.++++.|+..|
T Consensus 280 aa~~v~~~G~~~~ 292 (320)
T 3ie7_A 280 SASKVMQQDSSSF 292 (320)
T ss_dssp HHHHHTSSSSSCC
T ss_pred HHHHHhCcCCCCC
Confidence 9999999997654
No 37
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=3.4e-33 Score=227.01 Aligned_cols=223 Identities=21% Similarity=0.208 Sum_probs=172.0
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhh-hhccCCCCCCCchhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAA-ANLFTPDHLHVPENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~-~~~l~~~~i~~~~~~~~~~~~~ 78 (239)
+|.||+|.+|+.+++.|+++|| +++.+. +.+|+.+++.+++ +++|++....+. ...+++. ....+.+++++
T Consensus 44 ~~~vG~D~~g~~~~~~l~~~gv--~~v~~~~~~~T~~~~v~~~~-~g~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~ 116 (296)
T 2qhp_A 44 VSAVGNDELGDEIMEVFKEKQL--KNQIERVDYPTGTVQVTLDD-EGVPCYEIKEGVAWDNIPFT----DELKRLALNTR 116 (296)
T ss_dssp EEEEESSHHHHHHHHHHHHTTC--CEEEEEESSCCEEEEEC-------CCEEECSSCGGGCCCCC----HHHHHHHHTEE
T ss_pred EEEeCCChHHHHHHHHHHHcCC--CEEeecCCCCceEEEEEECC-CCCEEEEEecCChhhhCCcc----hhhHhhhcCCC
Confidence 4789999999999999999999 777654 6689998887775 456555444332 3344332 12235678999
Q ss_pred EEEEeccccc--cChHHHHHHHHHhhh-CC---CCCh---h------hHHHHhhHH---hcCHHHHHHHHHHcCCCccCH
Q psy6977 79 YYYVSGFFLT--VSPESILEVAKVALS-CT---IRNI---N------YLHHRFIYL---VLIDFEALAFAKQQNFQTEDL 140 (239)
Q Consensus 79 ~~~~~g~~~~--~~~~~~~~~~~~~~~-~g---~~~~---p------~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~ 140 (239)
++|++++... .+.+.+..+++.+++ .+ ++|+ + .+.++++++ ++|++|++.|++....+.+++
T Consensus 117 ~v~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~v~~D~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~ 196 (296)
T 2qhp_A 117 AVCFGSLAQRNEVSRATINRFLDTMPDIDGQLKIFDINLRQDFYTKEVLRESFKRCNILKINDEELVTISRMFGYPGIDL 196 (296)
T ss_dssp EEEECSGGGSSHHHHHHHHHHHHHSCCTTSCEEEEECCCCTTCCCHHHHHHHHHHCSEEEEEHHHHHHHHHHTTCTTSCH
T ss_pred EEEECChHhcChHHHHHHHHHHHHHHhcCCCEEEEECcCCccccCHHHHHHHHHHCCEEECCHHHHHHHhcccCCCCCCH
Confidence 9999764322 345678888888886 46 3443 2 223666665 999999999999754445678
Q ss_pred HHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHH
Q psy6977 141 HAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIE 220 (239)
Q Consensus 141 ~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~ 220 (239)
+++++.+.++ .|++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+++++|++
T Consensus 197 ~~~~~~l~~~-----~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGD~f~a~~~~~l~~g~~~~~a~~ 268 (296)
T 2qhp_A 197 QDKCWILLAK-----YNLKMLILTCGINGSYVFTPGVVSFQETPKV---PVADTVGAGDSFTAAFCASILNGKSVPEAHK 268 (296)
T ss_dssp HHHHHHHHHH-----TTCSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred HHHHHHHHHh-----cCCCEEEEeecCCCeEEEECCeEEEeCCCCC---ccccCCCchHHHHHHHHHHHHcCCCHHHHHH
Confidence 8888888763 2889999999999999999888889999887 7999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCcCC
Q psy6977 221 CGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 221 ~a~~~a~~~~~~~G~~~~ 238 (239)
+|+++|+.++++.|++.+
T Consensus 269 ~a~~~aa~~v~~~G~~~~ 286 (296)
T 2qhp_A 269 LAVEVSAYVCTQSGAMPE 286 (296)
T ss_dssp HHHHHHHHHHTSSSSSCC
T ss_pred HHHHHHHHHHcCCCCCCC
Confidence 999999999999998754
No 38
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=100.00 E-value=1.7e-33 Score=230.21 Aligned_cols=198 Identities=19% Similarity=0.200 Sum_probs=169.4
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.||+|.+|+.+++.|+++||+++++...+.+|+.+++++++ +++|+++.+.+++..++ ++. +.+++++++
T Consensus 76 i~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~T~~~~~~~~~-~g~~~~~~~~ga~~~l~--~~~-----~~l~~~~~v 147 (310)
T 3go6_A 76 SGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDA-SAENTVLVAPGANAHLT--PVP-----SAVANCDVL 147 (310)
T ss_dssp ECEECSSHHHHHHHHHHHHTTCBCTTCEECSSCCEEEEEEECT-TSCEEEEEECGGGGGCC--CCT-----TTTTTCSEE
T ss_pred EEEECCCHHHHHHHHHHHHcCCccceeEecCCCCCEEEEEEcC-CCCEEEEecCChhhhHH--HHH-----HHhhcCCEE
Confidence 5889999999999999999999999997766799999998886 67788887777777666 332 678899999
Q ss_pred EEeccccccChHHHHHHHHHhhhCC---CCCh-h------hHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHHH
Q psy6977 81 YVSGFFLTVSPESILEVAKVALSCT---IRNI-N------YLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALKI 147 (239)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p------~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l 147 (239)
++++ ..+.+.+..+++.+++.| ++|+ + .+.++++++ ++|++|+..|++.
T Consensus 148 ~~~~---~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~--------------- 209 (310)
T 3go6_A 148 LTQL---EIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEANDWPSP--------------- 209 (310)
T ss_dssp EECS---SSCHHHHHHHHHHHHHTTCEEEEECCSSSCCHHHHHHHHHHCSEEEEEHHHHHHSSSC---------------
T ss_pred EECC---CCCHHHHHHHHHHHHHcCCEEEEcCCccccchHHHHHHHhhCCEEEeCHHHHHHHhCC---------------
Confidence 9965 356788999999999988 5555 2 222666666 8999999877531
Q ss_pred hcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHc----CCCHHHHHHHHH
Q psy6977 148 SNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIK----GEPLSVCIECGV 223 (239)
Q Consensus 148 ~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~----g~~~~~a~~~a~ 223 (239)
++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++ |+++++|+++|+
T Consensus 210 ----------~~~vvvt~G~~Ga~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~~~~l~~~~~~g~~l~~a~~~A~ 276 (310)
T 3go6_A 210 ----------PTHFVITLGVRGARYVGADGVFEVPAPTV---TPVDTAGAGDVFAGVLAANWPRNPGSPAERLRALRRAC 276 (310)
T ss_dssp ----------CSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHCCSSSCCHHHHHHHHHHHH
T ss_pred ----------CCEEEEEECCCCEEEEECCceEEeCCCCC---CcCcCCCchHHHHHHHHHHHHhcccCCCCHHHHHHHHH
Confidence 37999999999999999999999999988 7999999999999999999999 999999999999
Q ss_pred HHHHHHHHhccCcC
Q psy6977 224 WAAQHIIQVSGCTL 237 (239)
Q Consensus 224 ~~a~~~~~~~G~~~ 237 (239)
++|+.++++.|++.
T Consensus 277 ~~aa~~v~~~G~~~ 290 (310)
T 3go6_A 277 AAGALATLVSGVGD 290 (310)
T ss_dssp HHHHHHTTSSCSTT
T ss_pred HHHHHHhCCCCCCC
Confidence 99999999999964
No 39
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=100.00 E-value=2.1e-34 Score=238.37 Aligned_cols=216 Identities=22% Similarity=0.299 Sum_probs=168.8
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeech--hhhhccCCCCCCCchhhhcccce
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANL--AAANLFTPDHLHVPENNKLIQNA 77 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~--~~~~~l~~~~i~~~~~~~~~~~~ 77 (239)
+|.||+|.+|+++++.|+++||+++++.+ .+.+|+.+++.+++ +++|+++.+. +++..++++. .+.+.++
T Consensus 70 ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~-~g~r~~~~~~~~~a~~~l~~~~------~~~l~~~ 142 (339)
T 1tyy_A 70 IGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTA-DGERSFTYLVHPGADTYVSPQD------LPPFRQY 142 (339)
T ss_dssp EEEECSSHHHHHHHHHHHTTTEECTTEEECTTSCCCEEEEC--------CEEECCSSCGGGGCCGGG------CCCCCTT
T ss_pred EEeeCCCHHHHHHHHHHHHcCCCchheEecCCCCCeEEEEEEcC-CCCeEEEEecCCChhhhCCcch------hhHhccC
Confidence 47899999999999999999999999886 45689988877765 5666655433 4555565431 1457789
Q ss_pred eEEEEeccccc--cChHHHHHHHHHhhhCC---CCCh---hh-----------HHHHhhHH---hcCHHHHHHHHHHcCC
Q psy6977 78 EYYYVSGFFLT--VSPESILEVAKVALSCT---IRNI---NY-----------LHHRFIYL---VLIDFEALAFAKQQNF 135 (239)
Q Consensus 78 ~~~~~~g~~~~--~~~~~~~~~~~~~~~~g---~~~~---p~-----------~~~~~~~~---~~n~~E~~~l~~~~~~ 135 (239)
++++++++.+. .+.+.+.++++.+++.| ++|+ +. +.++++++ ++|++|+..|++.
T Consensus 143 ~~v~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~--- 219 (339)
T 1tyy_A 143 EWFYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGA--- 219 (339)
T ss_dssp CEEEEEHHHHSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHCC---
T ss_pred CEEEEcchhhcCcccHHHHHHHHHHHHHcCCEEEEeCCCCccccCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCC---
Confidence 99999886432 34567888999999888 3443 21 22555665 9999999999875
Q ss_pred CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcC---
Q psy6977 136 QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKG--- 212 (239)
Q Consensus 136 ~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g--- 212 (239)
++++++++.+.++ |++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|
T Consensus 220 --~~~~~~~~~l~~~------g~~~VvvT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~~~~l~~g~~~ 288 (339)
T 1tyy_A 220 --SHWQDARYYLRDL------GCDTTIISLGADGALLITAEGEFHFPAPRV---DVVDTTGAGDAFVGGLLFTLSRANCW 288 (339)
T ss_dssp --SSGGGGSSTTGGG------TCSCEEEECGGGCEEEESSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHTTSSSC
T ss_pred --CCHHHHHHHHHHc------CCCEEEEEECCCceEEEeCCceEEcCCCCC---CcCCCCCchHHHHHHHHHHHHhcccc
Confidence 4556666666653 899999999999999998888889999887 79999999999999999999997
Q ss_pred --CCHHHHHHHHHHHHHHHHHhccCcC
Q psy6977 213 --EPLSVCIECGVWAAQHIIQVSGCTL 237 (239)
Q Consensus 213 --~~~~~a~~~a~~~a~~~~~~~G~~~ 237 (239)
.++++|+++|+++|+.++++.|++.
T Consensus 289 ~~~~l~~a~~~A~a~aa~~v~~~G~~~ 315 (339)
T 1tyy_A 289 DHALLAEAISNANACGAMAVTAKGAMT 315 (339)
T ss_dssp CHHHHHHHHHHHHHHHHHGGGSSSTTT
T ss_pred ccccHHHHHHHHHHHHHHHhCCCCCCC
Confidence 8999999999999999999999864
No 40
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=5.5e-33 Score=230.95 Aligned_cols=224 Identities=17% Similarity=0.150 Sum_probs=173.0
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeech---hhhhccCCCCCCCchhhhcccce
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANL---AAANLFTPDHLHVPENNKLIQNA 77 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~---~~~~~l~~~~i~~~~~~~~~~~~ 77 (239)
+|.||+|.+|+.+++.|+++||+++++.+.+.+|+.+++.++. ++.++++.+. .+...+++++++. ...++++
T Consensus 64 i~~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~t~~~~v~~~~-~~r~~~v~~~~~~~a~~~~~~~~~~~---~~~~~~~ 139 (351)
T 2afb_A 64 VTKLPNNPLGDAAAGHLRKFGVKTDYIARGGNRIGIYFLEIGA-SQRPSKVVYDRAHSAISEAKREDFDW---EKILDGA 139 (351)
T ss_dssp EEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCEEEEECCB-TTBCCEEEEECTTCTTTTCCGGGCCH---HHHTTTE
T ss_pred EEEeCCCHHHHHHHHHHHHcCCcceeEEECCCcceEEEEEecC-CCCcceEEEeCCCChhhhCChhhCCH---HHhhcCC
Confidence 4789999999999999999999999988766688887766553 4444444332 2234555555541 2456899
Q ss_pred eEEEEeccccccCh---HHHHHHHHHhhhCC---CCCh---h----------hHHHHhhHH---hcCHHHHHHHHHHcCC
Q psy6977 78 EYYYVSGFFLTVSP---ESILEVAKVALSCT---IRNI---N----------YLHHRFIYL---VLIDFEALAFAKQQNF 135 (239)
Q Consensus 78 ~~~~~~g~~~~~~~---~~~~~~~~~~~~~g---~~~~---p----------~~~~~~~~~---~~n~~E~~~l~~~~~~ 135 (239)
+++|++|+.+.++. +.+.++++.+++.| ++|+ + .+.++++++ ++|++|+..|++....
T Consensus 140 ~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~ 219 (351)
T 2afb_A 140 RWFHFSGITPPLGKELPLILEDALKVANEKGVTVSCDLNYRARLWTKEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVE 219 (351)
T ss_dssp EEEEEETTSGGGSTTHHHHHHHHHHHHHHHTCEEEEECCCCTTTCCHHHHHHHHHHHGGGCSEEEECHHHHHHHHCCCCS
T ss_pred CEEEEeCcccccChhHHHHHHHHHHHHHHcCCEEEEeCCCchhcCChHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCcc
Confidence 99999988765443 77888899988877 3443 1 122566665 9999999999986321
Q ss_pred ---------CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcE--------EEEECCeEEEEeccCCCCCCcccCCCCc
Q psy6977 136 ---------QTEDLHAIALKISNLPKQNPNRERITIITQGDKPI--------ILSQNGKTTEFPVQRLPAESVVDTNGAG 198 (239)
Q Consensus 136 ---------~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~--------~~~~~~~~~~~~~~~~~~~~vvdt~GaG 198 (239)
+.+++.++++.+.+. .|++.||||+|++|+ +++++++.+++|++++ +++||+|||
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~l~~~-----~g~~~vvvT~G~~G~~~~~~~g~~~~~~~~~~~~~~~~v---~vvdttGAG 291 (351)
T 2afb_A 220 GLDLKTGKLNREAYAKIAEEVTRK-----YNFKTVGITLRESISATVNYWSVMVFENGQPHFSNRYEI---HIVDRVGAG 291 (351)
T ss_dssp CC-------CHHHHHHHHHHHHHH-----HCCSEEEEEEEECSCSSEEEEEEEEEETTEEEECCCEEE---ECSCCTTHH
T ss_pred cccccccccchhhHHHHHHHHHHH-----cCCCEEEEEeCCcCccccccceeEEEeCCcEEEcCCCCC---ccCCCCCch
Confidence 223466777777662 178999999999975 6777888888998887 799999999
Q ss_pred hhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhccCc
Q psy6977 199 DSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQVSGCT 236 (239)
Q Consensus 199 Daf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~~~G~~ 236 (239)
|+|+|||++++++|+++++|+++|+++|+.++++.|++
T Consensus 292 DaF~ag~~~~l~~g~~l~~a~~~A~~~aa~~v~~~G~~ 329 (351)
T 2afb_A 292 DSFAGALIYGSLMGFDSQKKAEFAAAASCLKHTIPGDF 329 (351)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTSSSSS
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999985
No 41
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=5.1e-34 Score=235.38 Aligned_cols=223 Identities=13% Similarity=0.113 Sum_probs=175.6
Q ss_pred CCcccCCchHHHHHHHHHhcC--CeeeEEecCCCCceeEEEEEecCCCce-eEeechhhhhccCCCCCCCc--hhhhccc
Q psy6977 1 MGAVGKDNYSDILESKASEFG--LVVKYQHHDTEPTGTCAVLITDNGKAR-SLVANLAAANLFTPDHLHVP--ENNKLIQ 75 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~g--I~~~~v~~~~~~t~~~~~~~~~~~~~r-~~~~~~~~~~~l~~~~i~~~--~~~~~~~ 75 (239)
+|.||+| +|+++++.|+++| |+++++.+.+ +|+++++++++ +++| +.+..+++ .+++++++.. ...+.+.
T Consensus 71 ~~~vG~d-~G~~i~~~L~~~g~~V~~~~v~~~~-~t~~~~~~v~~-~g~~~~~~~~~g~--~l~~~~~~~~~~~~~~~~~ 145 (331)
T 2ajr_A 71 TGFVGGY-MGKILVEELRKISKLITTNFVYVEG-ETRENIEIIDE-KNKTITAINFPGP--DVTDMDVNHFLRRYKMTLS 145 (331)
T ss_dssp EEEEEHH-HHHHHHHHHHHHCTTEEEEEEEESS-CCEEEEEEEET-TTTEEEEEECCCC--CCCHHHHHHHHHHHHHHHT
T ss_pred EEEecCc-hHHHHHHHHHHcCCccceEEEEcCC-CCeEEEEEEeC-CCceEEEEeCCCC--CCCHHHHHHHHHHHHHhcc
Confidence 4789998 9999999999999 9999998755 57888888875 5566 66554443 3544433210 1124568
Q ss_pred ceeEEEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHhhH---H---hcCHHH-HHHHHHHcCCCccCHHH
Q psy6977 76 NAEYYYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRFIY---L---VLIDFE-ALAFAKQQNFQTEDLHA 142 (239)
Q Consensus 76 ~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~~~---~---~~n~~E-~~~l~~~~~~~~~~~~~ 142 (239)
.+++++++|+.+. .+.+.+..+++.+++.| ++|+ +.+.+++++ + ++|++| +..|++....+.+++++
T Consensus 146 ~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~l~~~~~~dil~~N~~E~~~~l~g~~~~~~~~~~~ 225 (331)
T 2ajr_A 146 KVDCVVISGSIPPGVNEGICNELVRLARERGVFVFVEQTPRLLERIYEGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVK 225 (331)
T ss_dssp TCSEEEEESCCCTTSCTTHHHHHHHHHHHTTCEEEEECCHHHHHHHHHSSCCCSEECCCCTTCCSCBTTBCCCSHHHHHH
T ss_pred cCCEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECChHHHHHHHhcCCCCeEEEeCccchHHHHhCCCCCCHHHHHH
Confidence 8999999987653 45678899999999888 6676 344556653 3 999999 98888753222345666
Q ss_pred HHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEe-ccCCCCCCcccCCCCchhhhHHHHHHHH-cCCCHHHHHH
Q psy6977 143 IALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFP-VQRLPAESVVDTNGAGDSFVGGFLSQLI-KGEPLSVCIE 220 (239)
Q Consensus 143 ~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~-~~~~~~~~vvdt~GaGDaf~ag~~~~l~-~g~~~~~a~~ 220 (239)
+++.+.+ . ++.||||+|++|++++++++.+++| ++++ +++||+||||+|+|||+++++ +|+++++|++
T Consensus 226 ~~~~l~~------~-~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~l~~l~~~g~~~~~al~ 295 (331)
T 2ajr_A 226 LAEKLAE------K-SQVSVVSYEVKNDIVATREGVWLIRSKEEI---DTSHLLGAGDAYVAGMVYYFIKHGANFLEMAK 295 (331)
T ss_dssp HHHHHHH------H-SSEEEEEETTTEEEEECSSCEEEEEESSCC---CGGGCTTHHHHHHHHHHHHHHHHCSCHHHHHH
T ss_pred HHHHHHH------h-cCEEEEeecCCceEEEeCCcEEEEecCCcc---cccCCCchHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 7777776 3 5899999999999999888888888 8877 899999999999999999999 9999999999
Q ss_pred HHHHHHHHHHHhccCcCC
Q psy6977 221 CGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 221 ~a~~~a~~~~~~~G~~~~ 238 (239)
+|+++|+.++++.|+..|
T Consensus 296 ~A~a~aa~~v~~~G~~~~ 313 (331)
T 2ajr_A 296 FGFASALAATRRKEKYMP 313 (331)
T ss_dssp HHHHHHHHHTTSSSCCCC
T ss_pred HHHHHHHHHHcCcCcCCC
Confidence 999999999999998654
No 42
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=100.00 E-value=1.1e-33 Score=235.21 Aligned_cols=231 Identities=16% Similarity=0.107 Sum_probs=166.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechh--hhhccCCCCCCCchhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLA--AANLFTPDHLHVPENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~--~~~~l~~~~i~~~~~~~~~~~~~ 78 (239)
+|+||+|++|+++++.|+++||+++++.+.+.+++.+++.....++.+.++.+.. +...+.+.+++ ..+.+++++
T Consensus 76 ig~vG~D~~G~~l~~~L~~~GVdt~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~d~~---~~~~~~~~~ 152 (351)
T 4gm6_A 76 ATVVPANPIGKMAVEHLWRHQVDTAFVVEAGDRLGTYYLESGTALKAPSVVYDRQHSSFARHKSMDWD---LSELLKGIR 152 (351)
T ss_dssp EEEECSSHHHHHHHHHHHHTTEECTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCHHHHCCCCCCC---HHHHHTTEE
T ss_pred EEEeCCCHHHHHHHHHHHHcCCCcccccccCCccceeEEEEccCCcceEEEEccccchhhhCCccccC---HHHHHhhcc
Confidence 5889999999999999999999999998776666566655555455665554432 23344444443 236789999
Q ss_pred EEEEeccccccC---hHHHHHHHHHhhhCC-----CCCh-hhHH----------HHhhHH---hcCHHHHHHHHHHcCCC
Q psy6977 79 YYYVSGFFLTVS---PESILEVAKVALSCT-----IRNI-NYLH----------HRFIYL---VLIDFEALAFAKQQNFQ 136 (239)
Q Consensus 79 ~~~~~g~~~~~~---~~~~~~~~~~~~~~g-----~~~~-p~~~----------~~~~~~---~~n~~E~~~l~~~~~~~ 136 (239)
++|++|+.+..+ .+.+.++++.+++.| ++|+ |.+| ++++++ ++|++|+..+++.....
T Consensus 153 ~~~~~g~~l~~~~~~~~~~~~~~~~ak~~g~~v~~D~n~r~~lw~~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~ 232 (351)
T 4gm6_A 153 VLHVSGITIALSTFWLEMVVKIIREAKRNGIKISFDMNYRAKLWELEAAKRAYQQLLPLVDYCSAGQMDAVAFFEISSET 232 (351)
T ss_dssp EEEEEHHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCTTC
T ss_pred cceecccchhhchhHHHHHHHHHHHHHHcCCCcccCCCcCchhhhhhhHHHHHHHHHHhCCccccCHHHHHHHhCCCCch
Confidence 999998776544 367889999999999 4554 4433 455655 99999999998763322
Q ss_pred ccCHHHHHHHHhcCCCCCCCCceEEEEeeCC--CcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCC
Q psy6977 137 TEDLHAIALKISNLPKQNPNRERITIITQGD--KPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEP 214 (239)
Q Consensus 137 ~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~--~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~ 214 (239)
.+..+...+....... ..+.+.++++.+. .+..++..++.++.+++++ .+|+||+||||+|+|||++++++|++
T Consensus 233 ~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~VvDttGAGDaF~ag~l~~l~~g~~ 308 (351)
T 4gm6_A 233 TDYYQAMHDKYPNIEL--FYATKRTVISASHHLLQGHLWTQGECWESEEYAI--YPIVDRVGGGDAYTAAVLHGILSEWR 308 (351)
T ss_dssp SCHHHHHHHHCTTCCE--EEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEE--CSCSCCTTHHHHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHhhhhhhhh--hhccccceeeeccCCceEEEEeCCceEEeCCCCC--CCcCCCCChhHHHHHHHHHHHHCCCC
Confidence 2222322222211100 0133445555544 4567778888777777765 27999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCcCC
Q psy6977 215 LSVCIECGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 215 ~~~a~~~a~~~a~~~~~~~G~~~~ 238 (239)
+++|+++|+++|+.++++.|++.+
T Consensus 309 ~~~al~~A~aaaal~v~~~Ga~~~ 332 (351)
T 4gm6_A 309 PDETVKFATAAAGLKHSIHGDINP 332 (351)
T ss_dssp HHHHHHHHHHHHHHHTTSSSSSCC
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999998765
No 43
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=100.00 E-value=1e-32 Score=225.28 Aligned_cols=217 Identities=15% Similarity=0.160 Sum_probs=172.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCc-hhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVP-ENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~-~~~~~~~~~~~ 79 (239)
+|+||+ .+|+++++.|+++||+++++.+.+ +|+.++++ + +++|+++...+ ..+++++++.. +....++++++
T Consensus 56 ~~~vG~-~~g~~i~~~L~~~gv~~~~v~~~~-~t~~~~~~--~-~g~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~ 128 (306)
T 2abq_A 56 LGFLGG-FTGAYVRNALEKEEIGLSFIEVEG-DTRINVKI--K-GKQETELNGTA--PLIKKEHVQALLEQLTELEKGDV 128 (306)
T ss_dssp EEEEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEE--E-SSSCEEEBCCC--CCCCHHHHHHHHHHHTTCCTTCE
T ss_pred EEEecc-hhHHHHHHHHHHcCCceEEEEcCC-CCceEEEE--e-CCceEEEECCC--CCCCHHHHHHHHHHHHhccCCCE
Confidence 478998 799999999999999999998754 57776654 3 55676655444 23544433210 01111578999
Q ss_pred EEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHhh-HH---hcCHHHHHHHHHHcCCCccCHHHHHHHHhc
Q psy6977 80 YYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRFI-YL---VLIDFEALAFAKQQNFQTEDLHAIALKISN 149 (239)
Q Consensus 80 ~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~~-~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~ 149 (239)
+|++|+.+. .+.+.+.++++.+++.| ++|+ +.+.++++ ++ ++|.+|+..|++....+.+++.++++.+.+
T Consensus 129 v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~ 208 (306)
T 2abq_A 129 LVLAGSVPQAMPQTIYRSMTQIAKERGAFVAVDTSGEALHEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQRLIG 208 (306)
T ss_dssp EEEESCCCTTSCTTHHHHHHHHHHTTTCEEEEECCHHHHHHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHH
T ss_pred EEEecCCCCCCCHHHHHHHHHHHHhcCCEEEEECChHHHHHHHhcCCcEEecCHHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 999987654 55688889999999888 6676 44557777 55 999999999998643333556677788877
Q ss_pred CCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy6977 150 LPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHI 229 (239)
Q Consensus 150 ~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~ 229 (239)
+ |++.||+|+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.+
T Consensus 209 ~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~a~~~~~l~~g~~~~~a~~~A~a~aa~~ 279 (306)
T 2abq_A 209 E------GIESILVSFAGDGALFASAEGMFHVNVPSG---EVRNSVGAGDSVVAGFLAALQEGKSLEDAVPFAVAAGSAT 279 (306)
T ss_dssp T------TCCEEEEECGGGCEEEEETTEEEEECCCCC---CCCCCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred c------CCCEEEEecCCCceEEEeCCCEEEEeCCCc---cccCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 4 899999999999999998888888998887 7999999999999999999999999999999999999999
Q ss_pred HHhc
Q psy6977 230 IQVS 233 (239)
Q Consensus 230 ~~~~ 233 (239)
+++.
T Consensus 280 v~~~ 283 (306)
T 2abq_A 280 AFSD 283 (306)
T ss_dssp HHSS
T ss_pred hcCc
Confidence 9987
No 44
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=100.00 E-value=1.7e-31 Score=219.77 Aligned_cols=208 Identities=17% Similarity=0.198 Sum_probs=166.5
Q ss_pred CCcccC-CchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhccccee
Q psy6977 1 MGAVGK-DNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~-D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~ 78 (239)
+|+||+ | +|+ +++.|+++||+++++.+ .+.+|+.+++++++ ++++.++.+++++..+++++++ .. .+++
T Consensus 67 i~~vG~~D-~g~-i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~-~g~~~~~~~~ga~~~~~~~~~~-----~~-~~~~ 137 (326)
T 3b1n_A 67 MGTLGAVD-AQP-YLDRMDALGLSREYVRVLPDTYSAQAMITTDL-DNNQITAFHPGAMMQSHVNHAG-----EA-KDIK 137 (326)
T ss_dssp EEEEETTT-CHH-HHHHHHHHTCEEEEEEEETTCCCEEEEEEECT-TCCCEEEEECGGGGGGGGSCGG-----GC-CSCS
T ss_pred EEEECCcC-HHH-HHHHHHHcCCcccceEEcCCCCceEEEEEECC-CCceEEEEecChhhhcChhhcc-----cc-cCCC
Confidence 478999 9 899 99999999999999986 45689999988876 5667665556666666665553 22 7899
Q ss_pred EEEEeccccccChHHHHHHHHHhhhCC---CCCh-h--h------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHH
Q psy6977 79 YYYVSGFFLTVSPESILEVAKVALSCT---IRNI-N--Y------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAI 143 (239)
Q Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p--~------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~ 143 (239)
+++++++. ++.+.++++.+++.| ++|+ + . +.++++++ ++|++|+..|++... .+.++
T Consensus 138 ~v~~~~~~----~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~---~~~~~- 209 (326)
T 3b1n_A 138 LAIVGPDG----FQGMVQHTEELAQAGVPFIFDPGQGLPLFDGATLRRSIELATYIAVNDYEAKLVCDKTG---WSEDE- 209 (326)
T ss_dssp EEEECSCC----HHHHHHHHHHHHHHTCCEEECCGGGGGGCCHHHHHHHHHHCSEEEEEHHHHHHHHHHHC---CCHHH-
T ss_pred EEEECCcc----HHHHHHHHHHHHHCCCEEEEeCchhhhhccHHHHHHHHHhCCEEecCHHHHHHHhCCCC---CCHHH-
Confidence 99997643 567888888888877 4554 2 1 23566665 999999999998632 23333
Q ss_pred HHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHH
Q psy6977 144 ALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGV 223 (239)
Q Consensus 144 ~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~ 223 (239)
+.+ +++.||||+|++|++++++++.+++|+++++ .++||+||||+|+|||++++++|+++++|+++|+
T Consensus 210 ---l~~-------~~~~vvvT~G~~Ga~~~~~~~~~~~~~~~v~--~vvDttGAGDaF~ag~l~~l~~g~~~~~a~~~A~ 277 (326)
T 3b1n_A 210 ---IAS-------RVQALIITRGEHGATIRHRDGTEQIPAVRAE--RVIDPTGCGDAFRGGLLYGIEHGFDWATAGRLAS 277 (326)
T ss_dssp ---HHT-------TSSEEEEECGGGCEEEEETTEEEEECCCCCS--CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred ---HHh-------cCCEEEEecCCCceEEEECCcEEEeCCCCCC--CCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 333 4689999999999999998888888888872 4789999999999999999999999999999999
Q ss_pred HHHHHHHHhccCcC
Q psy6977 224 WAAQHIIQVSGCTL 237 (239)
Q Consensus 224 ~~a~~~~~~~G~~~ 237 (239)
++|+.++++.|++.
T Consensus 278 ~~aa~~v~~~G~~~ 291 (326)
T 3b1n_A 278 LMGALKIAHQGPQT 291 (326)
T ss_dssp HHHHHHHTSSSTTC
T ss_pred HHHHHHHcCCCCCC
Confidence 99999999999874
No 45
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=99.98 E-value=2.3e-32 Score=223.13 Aligned_cols=218 Identities=12% Similarity=0.122 Sum_probs=171.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCc-hhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVP-ENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~-~~~~~~~~~~~ 79 (239)
+|+||+ ++|+++++.|+++||+++++.+.+ +|++++.+ . +++++++...++ .+++++++.. +....++++++
T Consensus 56 ~~~vG~-~~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~--~-~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~ 128 (306)
T 2jg5_A 56 LGFAGG-FPGKFIIDTLNNSAIQSNFIEVDE-DTRINVKL--K-TGQETEINAPGP--HITSTQFEQLLQQIKNTTSEDI 128 (306)
T ss_dssp EEEECH-HHHHHHHHHHHHTTCEECCEECSS-CCEEEEEE--E-SSSEEEEECCCC--CCCHHHHHHHHHHHTTCCTTCE
T ss_pred EEEecC-cchHHHHHHHHHCCCceeEEEcCC-CCeEEEEE--c-CCCEEEEECCCC--CCCHHHHHHHHHHHHhccCCCE
Confidence 478999 699999999999999999998754 47776654 3 456766655442 3444333210 00011578999
Q ss_pred EEEeccccc-cChHHHHHHHHHhhhCC---CCCh--hhHHHHhhH-H---hcCHHHHHHHHHHcCCCccCHHHHHHHHhc
Q psy6977 80 YYVSGFFLT-VSPESILEVAKVALSCT---IRNI--NYLHHRFIY-L---VLIDFEALAFAKQQNFQTEDLHAIALKISN 149 (239)
Q Consensus 80 ~~~~g~~~~-~~~~~~~~~~~~~~~~g---~~~~--p~~~~~~~~-~---~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~ 149 (239)
++++|+.+. .+.+.+..+++.+++.+ ++|+ ..+.+++++ + ++|++|+..|++....+.+++.++++.+.+
T Consensus 129 v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~ 208 (306)
T 2jg5_A 129 VIVAGSVPSSIPSDAYAQIAQITAQTGAKLVVDAEKELAESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKYGRLLVD 208 (306)
T ss_dssp EEEESCCCTTSCTTHHHHHHHHHHHHCCEEEEECCHHHHHHHGGGCCSEECCBHHHHHHHTTSCCCSHHHHHHHHHHHHH
T ss_pred EEEeCCCCCCCChHHHHHHHHHHHHCCCEEEEECChHHHHHHHhcCCeEEecCHHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 999987653 44578888999998877 6676 445566663 3 999999999987633333456677888877
Q ss_pred CCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy6977 150 LPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHI 229 (239)
Q Consensus 150 ~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~ 229 (239)
+ |++.|++|+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.+
T Consensus 209 ~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~a~aa~~ 279 (306)
T 2jg5_A 209 K------GAQSVIVSLGGDGAIYIDKEISIKAVNPQG---KVVNTVGSGDSTVAGMVAGIASGLSIEKAFQQAVACGTAT 279 (306)
T ss_dssp T------TCSCEEEECGGGCEEEECSSEEEEEECCCC---CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred c------CCCEEEEccCCCceEEEeCCcEEEEeCCcc---cccCCcChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 4 899999999999999998888889998887 7999999999999999999999999999999999999999
Q ss_pred HHhcc
Q psy6977 230 IQVSG 234 (239)
Q Consensus 230 ~~~~G 234 (239)
+++.|
T Consensus 280 v~~~G 284 (306)
T 2jg5_A 280 AFDED 284 (306)
T ss_dssp HTSSS
T ss_pred HcCCC
Confidence 99999
No 46
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=99.98 E-value=6.1e-32 Score=221.32 Aligned_cols=207 Identities=21% Similarity=0.245 Sum_probs=167.7
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechh-hhhccCCCCCCCchhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLA-AANLFTPDHLHVPENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~-~~~~l~~~~i~~~~~~~~~~~~~ 78 (239)
+|.||+|.+|+.+++.|+++||+++++.+ .+.+|+.+++.++ +++|+++.+.+ ++..+++++++. ..+++++
T Consensus 53 ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~--~g~~~~~~~~~~a~~~l~~~~~~~----~~l~~~~ 126 (313)
T 3ewm_A 53 ISKVGNDPFGEYLIEELSKENVDTRGIVKDEKKHTGIVFVQLK--GASPSFLLYDDVAYFNMTLNDINW----DIVEEAK 126 (313)
T ss_dssp EEEEESSHHHHHHHHHHHHTTCBCTTEEEESSSCCEEEEEECS--SSSCEEEECCSSGGGCCCGGGCCH----HHHHHCS
T ss_pred EEEeCCCHHHHHHHHHHHHcCCCccceeecCCCCceEEEEEec--CCCcceEeeccCHHHhCChhhCCH----HHhCCCC
Confidence 57899999999999999999999999885 5669998887765 46777666554 456787777763 5678899
Q ss_pred EEEEeccccc--cChHHHHHHHHHhhhCC---CCCh---hh------------HHHHhhHH---hcCHHHHHHHHHHcCC
Q psy6977 79 YYYVSGFFLT--VSPESILEVAKVALSCT---IRNI---NY------------LHHRFIYL---VLIDFEALAFAKQQNF 135 (239)
Q Consensus 79 ~~~~~g~~~~--~~~~~~~~~~~~~~~~g---~~~~---p~------------~~~~~~~~---~~n~~E~~~l~~~~~~ 135 (239)
+++++|+.+. .+.+.+.++++.+++ + ++|+ +. +.++++++ ++|++|++.|.+...
T Consensus 127 ~~~~~g~~~~~~~~~~~~~~~~~~a~~-~~~v~~Dp~~~~~~~~~~~~~~~~~~~~~l~~~di~~~N~~E~~~l~~~~~- 204 (313)
T 3ewm_A 127 IVNFGSVILARNPSRETVMKVIKKIKG-SSLIAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLENQGV- 204 (313)
T ss_dssp EEEEESGGGGSTTHHHHHHHHHHHHBT-TBEEEEECCCCGGGGTTCHHHHHHHHHHHHHHCSEEEEEHHHHHHHHTTTC-
T ss_pred EEEEcCcccCCcchHHHHHHHHHHhcc-CCEEEEeCCCChHHcCCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhccCc-
Confidence 9999997653 445788899998884 5 4444 22 12455555 899999988875410
Q ss_pred CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHH--cCC
Q psy6977 136 QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLI--KGE 213 (239)
Q Consensus 136 ~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~--~g~ 213 (239)
.. .+.+.||||+|++|++++++++.+++|++++ +++||+||||+|+|||+++++ +|+
T Consensus 205 -------------~~-----~~~~~vviT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaf~a~~~~~l~~~~g~ 263 (313)
T 3ewm_A 205 -------------EV-----KGSMLTAITLGPKGCRLIKNETVVDVPSYNV---NPLDTTGAGDAFMAALLVGILKLKGL 263 (313)
T ss_dssp -------------CC-----CCSSEEEEECGGGEEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHHSSSC
T ss_pred -------------cc-----cCceEEEEEECCCCeEEEECCeeEEcCCCCc---ccCCCCCchHHHHHHHHHHHHhcCCC
Confidence 11 2556789999999999999999999999988 899999999999999999998 999
Q ss_pred CHHHHHHHHHHHHHHHHHhccCc
Q psy6977 214 PLSVCIECGVWAAQHIIQVSGCT 236 (239)
Q Consensus 214 ~~~~a~~~a~~~a~~~~~~~G~~ 236 (239)
++++|+++|+++|+.++++.|+.
T Consensus 264 ~l~~a~~~A~~~aa~~v~~~G~~ 286 (313)
T 3ewm_A 264 DLLKLGKFANLVAALSTQKRGAW 286 (313)
T ss_dssp CHHHHHHHHHHHHHHHTTSCSSC
T ss_pred CHHHHHHHHHHHHHHHHccCCCC
Confidence 99999999999999999999984
No 47
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=99.97 E-value=7.9e-32 Score=222.51 Aligned_cols=212 Identities=17% Similarity=0.122 Sum_probs=168.0
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|+||+| +|+ +++.|+++||+++++.+. +.+|+.+++++++ +++|+++.+++++..+++++++. ....++++++
T Consensus 77 i~~vG~D-~g~-i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~-~g~~~~~~~~ga~~~~~~~~~~~--~~~~l~~~~~ 151 (334)
T 2pkf_A 77 VGAAGAD-FAD-YRDWLKARGVNCDHVLISETAHTARFTCTTDV-DMAQIASFYPGAMSEARNIKLAD--VVSAIGKPEL 151 (334)
T ss_dssp ECEECGG-GHH-HHHHHHTTTEECTTCEECSSCCCEEEEEEECT-TCCEEEEEECGGGGGGGGCCHHH--HHHHHCSCSE
T ss_pred EEEEeCc-hHH-HHHHHHHCCCceeeeEecCCCCceEEEEEEcC-CCCEEEEECCchhhhCCHhhcCh--hhhhhcCCCE
Confidence 5789999 999 999999999999998864 5689999888876 56777655666666666655542 1134578999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC---CCCh---hh------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHH
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT---IRNI---NY------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIA 144 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~---p~------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~ 144 (239)
+|++++. ++.+.++++.+++.| ++|+ +. +.++++++ ++|++|+..|++... .+.++
T Consensus 152 v~~~~~~----~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~l~~~l~~~dil~~N~~E~~~l~g~~~---~~~~~-- 222 (334)
T 2pkf_A 152 VIIGAND----PEAMFLHTEECRKLGLAFAADPSQQLARLSGEEIRRLVNGAAYLFTNDYEWDLLLSKTG---WSEAD-- 222 (334)
T ss_dssp EEEESCC----HHHHHHHHHHHHHHTCCEEEECGGGGGTSCHHHHHTTTTTCSEEEEEHHHHHHHHHHHC---CCHHH--
T ss_pred EEEcCCC----hHHHHHHHHHHHhcCCeEEEeccchhhhhhHHHHHHHHhcCCEEecCHHHHHHHhccCC---CCHHH--
Confidence 9998653 567788888888777 4554 21 22455555 999999999998632 23332
Q ss_pred HHHhcCCCCCCCCceEEEEeeCCCcEEEEECCe-EEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHH
Q psy6977 145 LKISNLPKQNPNRERITIITQGDKPIILSQNGK-TTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGV 223 (239)
Q Consensus 145 ~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~-~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~ 223 (239)
+.+ +++.||||+|++|++++++++ .+++|+++++ .++||+||||+|+|||++++++|+++++|+++|+
T Consensus 223 --l~~-------~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~--~vvDttGAGDaF~a~~~~~l~~g~~~~~a~~~A~ 291 (334)
T 2pkf_A 223 --VMA-------QIDLRVTTLGPKGVDLVEPDGTTIHVGVVPET--SQTDPTGVGDAFRAGFLTGRSAGLGLERSAQLGS 291 (334)
T ss_dssp --HHT-------TCSCEEEECGGGCEEEECTTSCEEEECCCCCS--CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred --HHh-------cCCEEEEEeCCCCeEEEeCCCcEEEeCCcCCC--CCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 333 368999999999999998877 8888888872 4789999999999999999999999999999999
Q ss_pred HHHHHHHHhccCcC
Q psy6977 224 WAAQHIIQVSGCTL 237 (239)
Q Consensus 224 ~~a~~~~~~~G~~~ 237 (239)
++|+.++++.|++.
T Consensus 292 ~~aa~~v~~~G~~~ 305 (334)
T 2pkf_A 292 LVAVLVLESTGTQE 305 (334)
T ss_dssp HHHHHHHTSSSSSC
T ss_pred HHHHHHHhCCCCCc
Confidence 99999999999874
No 48
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=99.97 E-value=3.1e-30 Score=211.18 Aligned_cols=212 Identities=20% Similarity=0.257 Sum_probs=164.4
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC-CCCceeEEEEE-ecCCCceeEeechhhhhccCCCCCCCchhhhccccee
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD-TEPTGTCAVLI-TDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAE 78 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~-~~~t~~~~~~~-~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~ 78 (239)
+|+||+| +|+.+++.|+++||+++++.+. +.+|....-.. ...+..+++....+....+.++ +. +.+++++
T Consensus 49 ig~vG~D-~g~~~~~~L~~~gVd~~~v~~~~~~~T~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~ 121 (313)
T 3kd6_A 49 VGVVGSD-FGKEHFDLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLDTQLNVFAEFDPH-VP-----QYYRDSK 121 (313)
T ss_dssp EEEEETT-SCHHHHHHHHHTTEEEEEEEEETTCCCEEEEEEECTTSSCEEEEEEECGGGTTCCCC-CC-----GGGTTCS
T ss_pred EEecCCC-cHHHHHHHHHHcCCCccceEEcCCCCeeeeeeeeeccccccceeecccchHhhcCcc-ch-----HHHccCC
Confidence 5789999 9999999999999999999865 45674321111 1113344444444444455442 22 5678999
Q ss_pred EEEEeccccccChHHHHHHHHHhhhCC---CCCh-h--------hHHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHH
Q psy6977 79 YYYVSGFFLTVSPESILEVAKVALSCT---IRNI-N--------YLHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAI 143 (239)
Q Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~-p--------~~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~ 143 (239)
++++++ ++++....+++.+ +.+ ++|+ + .+.++++++ ++|++|+..|++. ++++++
T Consensus 122 ~v~~~~----~~~~~~~~~~~~~-~~~~~v~~Dp~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~-----~~~~~~ 191 (313)
T 3kd6_A 122 FVCLGN----IDPELQLKVLDQI-DDPKLVVCDTMNFWIEGKPEELKKVLARVDVFIVNDSEARLLSGD-----PNLVKT 191 (313)
T ss_dssp EEEECS----SCHHHHHHHHTTC-SSCSEEEEECCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHSC-----SCHHHH
T ss_pred EEEEcC----CCHHHHHHHHHHH-hhCCEEEEcChhhhhhhhHHHHHHHHhcCCEEEeCHHHHHHHhCC-----CCHHHH
Confidence 999954 3456667777777 344 4554 2 223566655 9999999999975 688889
Q ss_pred HHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCC-----CHHHH
Q psy6977 144 ALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGE-----PLSVC 218 (239)
Q Consensus 144 ~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~-----~~~~a 218 (239)
++.+.++ |++.||||+|++|++++++++.+++|++++. +++||+||||+|+|||++++++|. ++++|
T Consensus 192 ~~~l~~~------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~--~vvdttGAGDaf~a~~~~~l~~g~~~~~~~l~~a 263 (313)
T 3kd6_A 192 ARIIREM------GPKTLIIKKGEHGALLFTDNGIFAAPAFPLE--SIYDPTGAGDTFAGGFIGHLARCGNTSEAEMRKA 263 (313)
T ss_dssp HHHHHTT------SCSEEEEECTTSCEEEEETTEEEEECCCTTC--CCSCCTTHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred HHHHHHc------CCCEEEEeeCCCcEEEEECCceEEeCCCCCC--CcCCCCCccHHHHHHHHHHHHcCCCccccCHHHH
Confidence 9999885 8999999999999999999998999988762 699999999999999999999998 89999
Q ss_pred HHHHHHHHHHHHHhccCcC
Q psy6977 219 IECGVWAAQHIIQVSGCTL 237 (239)
Q Consensus 219 ~~~a~~~a~~~~~~~G~~~ 237 (239)
+++|+++|+.++++.|++.
T Consensus 264 ~~~a~~~aa~~v~~~G~~~ 282 (313)
T 3kd6_A 264 VLYGSAMASFCVEQFGPYR 282 (313)
T ss_dssp HHHHHHHHHHHTTSSTTGG
T ss_pred HHHHHHHHHHHHeecCCCC
Confidence 9999999999999999874
No 49
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=99.97 E-value=4.6e-30 Score=209.46 Aligned_cols=195 Identities=24% Similarity=0.281 Sum_probs=158.2
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEec-CCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHH-DTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEY 79 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~-~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~ 79 (239)
+|.||+| +|+.+++.|+++||+++++.+ ++.+|+.+++++++ ++|+++.+++++..++ ++++ +++++
T Consensus 76 i~~vG~D-~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~--g~r~~~~~~ga~~~~~-~~l~--------~~~~~ 143 (306)
T 3bf5_A 76 YSAVGMK-THREYLAMIESMGINTGHVEKFEDESGPICYIATDG--KKQVSFMHQGAMAAWA-PQLA--------DEYEY 143 (306)
T ss_dssp EEEEETT-TCHHHHHHHHHTTCCCTTEEEETTCCCSEEEEEECS--SCEEEEEECTHHHHCC-CCCC--------SCEEE
T ss_pred EEEEeCC-hHHHHHHHHHHcCCCchheEecCCCCCceEEEEEcC--CeeEEEEeCChhhhhh-Hhhc--------CCCCE
Confidence 4789999 999999999999999999864 56689999988874 6777777777777776 4432 68999
Q ss_pred EEEeccccccChHHHHHHHHHhhhCC-CCCh-hh--------HHHHhhHH---hcCHHHHHHHHHHcCCCccCHHHHHHH
Q psy6977 80 YYVSGFFLTVSPESILEVAKVALSCT-IRNI-NY--------LHHRFIYL---VLIDFEALAFAKQQNFQTEDLHAIALK 146 (239)
Q Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~~~g-~~~~-p~--------~~~~~~~~---~~n~~E~~~l~~~~~~~~~~~~~~~~~ 146 (239)
+|++++. .+.++++.+++ - ++|+ +. +.++++++ ++|++|+..|++.......
T Consensus 144 v~~~~~~------~~~~~~~~a~~-~v~~D~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~-------- 208 (306)
T 3bf5_A 144 VHFSTGP------NYLDMAKSIRS-KIIFDPSQEIHKYSKDELKKFHEISYMSIFNDHEYRVFREMTGLSSP-------- 208 (306)
T ss_dssp EEECSSS------SHHHHHHHCCS-EEEECCGGGGGGSCHHHHHHHHHHCSEEEEEHHHHHHHHHHHCCSSC--------
T ss_pred EEECChH------HHHHHHHHhCC-cEEEcCchhhhhccHHHHHHHHhcCCEEEcCHHHHHHHhCCCCcCcc--------
Confidence 9998654 45677777765 4 4555 32 23566665 9999999999886321110
Q ss_pred HhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHH
Q psy6977 147 ISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAA 226 (239)
Q Consensus 147 l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a 226 (239)
++ .||||+|++|++++++++.+++|++++ + +||+||||+|+|||++++++|+++++|+++|+++|
T Consensus 209 --~l---------~vvvT~G~~Ga~~~~~~~~~~~~~~~v---~-vDttGAGDaF~ag~~~~l~~g~~~~~a~~~A~~~a 273 (306)
T 3bf5_A 209 --KV---------TTIVTNGERGSSLFMDGKKYDFPAIPS---S-GDTVGAGDSFRAGLYLALYNRRSIEKGMIYGTIIA 273 (306)
T ss_dssp --SS---------CEEEEEGGGEEEEEETTEEEEEECCCC---C-SCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred --cE---------EEEEeecccCeEEEeCCcEEEecCCcC---C-CCCCCccHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 21 199999999999999888889999887 7 99999999999999999999999999999999999
Q ss_pred HHHHHh--ccCcC
Q psy6977 227 QHIIQV--SGCTL 237 (239)
Q Consensus 227 ~~~~~~--~G~~~ 237 (239)
+.++++ .|++.
T Consensus 274 a~~v~~~~~G~~~ 286 (306)
T 3bf5_A 274 HHVIDDGIENFSL 286 (306)
T ss_dssp HHHHHHCSTTCCC
T ss_pred HHHhccCCccccc
Confidence 999999 99864
No 50
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.97 E-value=2.3e-31 Score=216.46 Aligned_cols=206 Identities=14% Similarity=0.123 Sum_probs=158.5
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCchhhhcccceeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVPENNKLIQNAEYY 80 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~ 80 (239)
+|.||+|. +.+++.|+++||+++++.. +.+|+...++ ++ +++++++...+++..+++++++ . ..++++
T Consensus 56 i~~vG~D~--~~~~~~L~~~gVd~~~v~~-~~~t~~~~i~-~~-~g~~~~~~~~~~~~~l~~~~~~-----~--~~~~~v 123 (298)
T 1vk4_A 56 ITKCTRED--VSKFSFLRDNGVEVVFLKS-PRTTSIENRY-GS-DPDTRESFLISAADPFTESDLA-----F--IEGEAV 123 (298)
T ss_dssp EEEECTTT--GGGGTTTGGGTCEEEEEEC-SSCEEEEEEC-------CCEEEEEECCCCCCGGGGG-----G--CCSSEE
T ss_pred EEEEcCCH--HHHHHHHHHcCCceEEEec-CCCcEEEEEE-cC-CCCeeEEEeccccccCCHHHcC-----c--CCCCEE
Confidence 47899997 7899999999999999875 3466655443 43 4455555555555566554442 1 578999
Q ss_pred EEecccc-ccChHHHHHHHHHhhhCC---CCCh-h----------------hHHHHhhHH---hcCHHHHHHHHHHcCCC
Q psy6977 81 YVSGFFL-TVSPESILEVAKVALSCT---IRNI-N----------------YLHHRFIYL---VLIDFEALAFAKQQNFQ 136 (239)
Q Consensus 81 ~~~g~~~-~~~~~~~~~~~~~~~~~g---~~~~-p----------------~~~~~~~~~---~~n~~E~~~l~~~~~~~ 136 (239)
+++++.. +.+ .++++.+++.| ++|+ + .+.++++++ ++|++|+..|++.
T Consensus 124 ~~~~~~~~~~~----~~~~~~~~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~---- 195 (298)
T 1vk4_A 124 HINPLWYGEFP----EDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLKYLDLFKVDSREAETLTGT---- 195 (298)
T ss_dssp EECCSSTTSSC----GGGHHHHHHHCSEEEEETHHHHEEEETTEEEECCCTTHHHHGGGCSEEEEEHHHHHHHHSC----
T ss_pred EECCccccccc----HHHHHHHHHcCCEEEEecCccccccccccccccchHHHHhhcccCCEEecCHHHHHHHhCC----
Confidence 9987633 233 35556666666 5555 3 223567765 9999999999875
Q ss_pred ccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHc-CCCH
Q psy6977 137 TEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIK-GEPL 215 (239)
Q Consensus 137 ~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~-g~~~ 215 (239)
++++++++.+.++ |++.||||+ ++|++++++ +.+++|++++ +++||+||||+|+|||++++++ |+++
T Consensus 196 -~~~~~~~~~l~~~------g~~~vvvT~-~~G~~~~~~-~~~~~~~~~v---~vvDttGAGDaF~a~~~~~l~~~g~~~ 263 (298)
T 1vk4_A 196 -NDLRESCRIIRSF------GAKIILATH-ASGVIVFDG-NFYEASFRSW---SLEGRTGRGDTCTAAFLVGFVFKKMSI 263 (298)
T ss_dssp -SCHHHHHHHHHHT------TCSSEEEEE-TTEEEEESS-SEEEEECCCS---SGGGGTTHHHHHHHHHHHHHHTSCCCH
T ss_pred -CCHHHHHHHHHhc------CCCEEEEEc-CCCcEEEeC-CEEEeccCCc---ccCCCcCccHHHHHHHHHHHHHcCCCH
Confidence 4788888888885 899999999 999999887 7788888887 8999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHHHHHhccCcCC
Q psy6977 216 SVCIECGVWAAQHIIQVSGCTLG 238 (239)
Q Consensus 216 ~~a~~~a~~~a~~~~~~~G~~~~ 238 (239)
++|+++|+++|+.++++.|+..+
T Consensus 264 ~~a~~~A~a~aa~~v~~~G~~~~ 286 (298)
T 1vk4_A 264 EKATKFAAAVTSVKMRHPGPLRR 286 (298)
T ss_dssp HHHHHHHHHHHHHHTTSSSSCCG
T ss_pred HHHHHHHHHHHHHHHccCCCCCC
Confidence 99999999999999999998753
No 51
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=99.91 E-value=2.7e-24 Score=175.83 Aligned_cols=201 Identities=15% Similarity=0.201 Sum_probs=140.0
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecC--CCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCc-hhh-hc-cc
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHD--TEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVP-ENN-KL-IQ 75 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~--~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~-~~~-~~-~~ 75 (239)
+|.||+|. |+++ |+++||+++++.+. ..+|+..+ ..+ ..+++++++.. +.+ .. +.
T Consensus 16 ~g~vG~D~-g~~i---L~~~GV~~~~v~~~~~~~~t~~~~--------------~~g--~~l~~~~i~~~~~~~~~~~~~ 75 (312)
T 2yxt_A 16 RGYVGNRA-ATFP---LQVLGFEIDAVNSVQFSNHTGYAH--------------WKG--QVLNSDELQELYEGLRLNNMN 75 (312)
T ss_dssp SSCSTHHH-HHHH---HHHTTCEEEEEEEEEESSCTTSSC--------------CCE--EECCHHHHHHHHHHHHHTTCC
T ss_pred CCccchHh-hHHH---HHHcCCeEEEEEEEEecCCCCcCC--------------ccC--ccCCHHHHHHHHHHHHhcCCc
Confidence 58999998 9999 99999999998752 22333221 011 23333333210 000 11 56
Q ss_pred ceeEEEEeccccc-cChHHHHHHHHHhhhCC-----CCCh---h----------------hHHH-HhhHH---hcCHHHH
Q psy6977 76 NAEYYYVSGFFLT-VSPESILEVAKVALSCT-----IRNI---N----------------YLHH-RFIYL---VLIDFEA 126 (239)
Q Consensus 76 ~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~g-----~~~~---p----------------~~~~-~~~~~---~~n~~E~ 126 (239)
+++++++ |+... ...+.+.++++.+++.| ++|+ + .+.+ +++++ ++|++|+
T Consensus 76 ~~~~v~~-G~~~~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ll~~~dil~pN~~Ea 154 (312)
T 2yxt_A 76 KYDYVLT-GYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVVPLADIITPNQFEA 154 (312)
T ss_dssp CCSEEEE-CCCCCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHTTGGGCSEECCCHHHH
T ss_pred cCCEEEE-CCCCCHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHHhhhhCCEEcCCHHHH
Confidence 7899775 55432 11345567888888765 2453 1 1222 66665 9999999
Q ss_pred HHHHHHcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCC------cEEEE-------EC-C----eEEEEeccCCCC
Q psy6977 127 LAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDK------PIILS-------QN-G----KTTEFPVQRLPA 188 (239)
Q Consensus 127 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~------G~~~~-------~~-~----~~~~~~~~~~~~ 188 (239)
+.|++....+.+++.++++.++++ |++.||||.|+. |++++ ++ + +.++++++++
T Consensus 155 ~~L~g~~~~~~~~~~~~~~~l~~~------g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-- 226 (312)
T 2yxt_A 155 ELLSGRKIHSQEEALRVMDMLHSM------GPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIRKV-- 226 (312)
T ss_dssp HHHHSCCCCSHHHHHHHHHHHHHH------SCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCCEEEEEEEEECC--
T ss_pred HHHhCCCCCCHHHHHHHHHHHHHc------CCCEEEEecccCCCCCCCceEEEEEeccccccccccccceEEEeeccc--
Confidence 999986433345677888888874 899999998876 47665 44 2 6778888887
Q ss_pred CCcccCCCCchhhhHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHh
Q psy6977 189 ESVVDTNGAGDSFVGGFLSQLIK-GEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 189 ~~vvdt~GaGDaf~ag~~~~l~~-g~~~~~a~~~a~~~a~~~~~~ 232 (239)
++ ||+||||+|+|+|++++++ |+++++|+++|+++++.++++
T Consensus 227 -~v-dttGAGDaf~a~~~~~l~~~g~~l~~a~~~A~a~a~~~v~~ 269 (312)
T 2yxt_A 227 -DA-VFVGTGDLFAAMLLAWTHKHPNNLKVACEKTVSTLHHVLQR 269 (312)
T ss_dssp -SS-CCSSHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred -CC-CCCCchHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 66 9999999999999999998 999999999999999888764
No 52
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=99.90 E-value=3.4e-23 Score=167.05 Aligned_cols=206 Identities=12% Similarity=0.107 Sum_probs=142.6
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEEecCCCCceeEEEEEecCCCceeEeechhhhhccCCCCCCCc--hhhh--cccc
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQHHDTEPTGTCAVLITDNGKARSLVANLAAANLFTPDHLHVP--ENNK--LIQN 76 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~~~~~r~~~~~~~~~~~l~~~~i~~~--~~~~--~~~~ 76 (239)
+|.+|+| ..+..|++.||++.++.+ . ++.+. .+.+.+ .+ ..++++++... .+.+ .+++
T Consensus 27 ~g~~G~d----~~~~~l~~~Gv~~~~v~t-------~-i~~~~-~g~~~~---~g--~~~~~~~~~~~~~~l~~~~~~~~ 88 (283)
T 2ddm_A 27 YGSVGNS----IAVPAIKQNGLNVFAVPT-------V-LLSNT-PHYDTF---YG--GAIPDEWFSGYLRALQERDALRQ 88 (283)
T ss_dssp SSSSTHH----HHHHHHHHTTCCEEEEEE-------E-EESSC-TTSSCC---CE--EECCHHHHHHHHHHHHHTTCCTT
T ss_pred CCcchHH----HHHHHHHHcCCeeeEEeE-------E-EeccC-CCcCce---ee--eeCCHHHHHHHHHHHHhcCCccc
Confidence 4678877 356789999999998853 1 12222 333331 11 23333333210 1112 4567
Q ss_pred eeEEEEeccccccChHHHHHHHHHhhh--CC---CCCh---h---------h-H----HHHhhHH---hcCHHHHHHHHH
Q psy6977 77 AEYYYVSGFFLTVSPESILEVAKVALS--CT---IRNI---N---------Y-L----HHRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 77 ~~~~~~~g~~~~~~~~~~~~~~~~~~~--~g---~~~~---p---------~-~----~~~~~~~---~~n~~E~~~l~~ 131 (239)
+++++++........+.+.++++.+++ .| ++|+ + . . .++++++ ++|..|++.|++
T Consensus 89 ~~~v~~G~l~~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g 168 (283)
T 2ddm_A 89 LRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTG 168 (283)
T ss_dssp CCEEEECCCSCHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECCBHHHHHHHHT
T ss_pred CCEEEECCcCCHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecCCHHHHHHHhC
Confidence 899988433222234677788888886 45 5553 2 1 1 1355655 999999999998
Q ss_pred HcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCC-------cEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHH
Q psy6977 132 QQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDK-------PIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGG 204 (239)
Q Consensus 132 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~-------G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag 204 (239)
....+.++..++++++.++ |++.||+|.|++ |++++++++.++++++++ . +||+||||+|+|+
T Consensus 169 ~~~~~~~~~~~~a~~l~~~------g~~~Vvvt~G~~~~~~~~~G~~~~~~~~~~~~~~~~v---~-vdt~GAGDaf~a~ 238 (283)
T 2ddm_A 169 KNCRDLDSAIAAAKSLLSD------TLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRV---K-TDLKGTGDLFCAQ 238 (283)
T ss_dssp SCCSSHHHHHHHHHHHCCS------SCCEEEEEC-------CEEEEEEEETTEEEEEEEECC---C-CCCCCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHc------CCCEEEEccccCccCCCceeEEEEeCCceEEEeecee---C-CCCCChHHHHHHH
Confidence 6433345677777888774 899999999999 889888888888888876 4 7999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhcc
Q psy6977 205 FLSQLIKGEPLSVCIECGVWAAQHIIQVSG 234 (239)
Q Consensus 205 ~~~~l~~g~~~~~a~~~a~~~a~~~~~~~G 234 (239)
|++++++|+++++|+++|+++++.++++..
T Consensus 239 ~~~~l~~g~~~~~A~~~A~a~a~~~v~~~~ 268 (283)
T 2ddm_A 239 LISGLLKGKALTDAVHRAGLRVLEVMRYTQ 268 (283)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998754
No 53
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=99.80 E-value=1.5e-19 Score=145.98 Aligned_cols=146 Identities=10% Similarity=0.078 Sum_probs=111.0
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhCC----CCCh-hh---------------HH-HHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSCT----IRNI-NY---------------LH-HRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g----~~~~-p~---------------~~-~~~~~~---~~n~~E~~~l~~ 131 (239)
+++++++ |+. .+.+.+..+++.+++.+ ++|+ +. +. ++++++ ++|..|++.|++
T Consensus 94 ~~~~v~~-G~l--~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll~~~dil~pN~~Ea~~L~g 170 (288)
T 1jxh_A 94 RIDTTKI-GML--AETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALLD 170 (288)
T ss_dssp CCSEEEE-CCC--CSHHHHHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHHHT
T ss_pred CCCEEEE-CCC--CCHHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCCHHHHHHHHHHHHhhCcEEcCCHHHHHHHcC
Confidence 3677776 432 25678888888888776 3453 11 22 255654 999999999998
Q ss_pred H-cCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCc-----EEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHH
Q psy6977 132 Q-QNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKP-----IILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGF 205 (239)
Q Consensus 132 ~-~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G-----~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~ 205 (239)
. ...+.++.+++++.+.++ |++.||+|.|.+| ++++++++.++++++++ +++||+||||+|+|+|
T Consensus 171 ~~~~~~~~~~~~~a~~l~~~------g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~---~~vdttGAGD~f~a~~ 241 (288)
T 1jxh_A 171 APHARTEQEMLAQGRALLAM------GCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRV---NTKNTHGTGCTLSAAL 241 (288)
T ss_dssp CCCCCSHHHHHHHHHHHHHT------TCSEEEEBC---------CEEECSSCEEEC---CC---CCSCCBTHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHh------CCCEEEEeccCCCCCceeEEEEECCeEEEEecccc---CCCCCCCchHHHHHHH
Confidence 6 433445677788888875 8899999999999 88888777888888887 7999999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhc
Q psy6977 206 LSQLIKGEPLSVCIECGVWAAQHIIQVS 233 (239)
Q Consensus 206 ~~~l~~g~~~~~a~~~a~~~a~~~~~~~ 233 (239)
++++++|.++++|+++|+++++.++++.
T Consensus 242 ~a~l~~g~~~~~A~~~A~a~a~~~v~~~ 269 (288)
T 1jxh_A 242 AALRPRHRSWGETVNEAKAWLSAALAQA 269 (288)
T ss_dssp HHHGGGSSSHHHHHHHHHHHHHHHHTTG
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999776
No 54
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=99.80 E-value=6.1e-19 Score=140.19 Aligned_cols=146 Identities=16% Similarity=0.168 Sum_probs=113.5
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhCC----CCCh---h-------------hH-HHHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSCT----IRNI---N-------------YL-HHRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g----~~~~---p-------------~~-~~~~~~~---~~n~~E~~~l~~ 131 (239)
+.+.+++ |+.. +.+.+..+++.+++.+ ++|+ + .+ .++++++ ++|..|++.|++
T Consensus 70 ~~~~v~~-G~l~--~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g 146 (258)
T 1ub0_A 70 PLHAAKT-GALG--DAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEALLG 146 (258)
T ss_dssp CCSEEEE-CCCC--SHHHHHHHHHHHHHTTCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHHHC
T ss_pred CCCEEEE-CCcC--CHHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccChHHHHHHHHhhcccCeEEeCCHHHHHHHhC
Confidence 3677766 4322 4567778888887754 4554 1 11 1345544 999999999998
Q ss_pred HcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCC-c----EEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHH
Q psy6977 132 QQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDK-P----IILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFL 206 (239)
Q Consensus 132 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~-G----~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~ 206 (239)
....+.+++.++++++.++ |++.||+|.|++ | ++++++++.++++++++ +++||+||||+|+|+|+
T Consensus 147 ~~~~~~~~~~~~a~~l~~~------g~~~vvvt~g~~~G~~~~~~~~~~~~~~~~~~~~~---~~~dt~GaGD~f~a~~~ 217 (258)
T 1ub0_A 147 RPIRTLKEAEEAAKALLAL------GPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRV---HTRNTHGTGCTLSAAIA 217 (258)
T ss_dssp SCCCSHHHHHHHHHHHHTT------SCSCEEEEEEECC---EEEEEEETTEEEEEEECCC---CCSCCTTHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHc------CCCEEEEccCCCCCCceEEEEEeCCeEEEEecccc---CCCCCCChHHHHHHHHH
Confidence 6433335677788888874 889999999998 8 78888888888888887 79999999999999999
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHhc
Q psy6977 207 SQLIKGEPLSVCIECGVWAAQHIIQVS 233 (239)
Q Consensus 207 ~~l~~g~~~~~a~~~a~~~a~~~~~~~ 233 (239)
+++++|.++++|+++|+++++.++++.
T Consensus 218 ~~l~~g~~~~~a~~~a~~~~~~~~~~~ 244 (258)
T 1ub0_A 218 ALLAKGRPLAEAVAEAKAYLTRALKTA 244 (258)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999988764
No 55
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=99.77 E-value=4.2e-18 Score=137.52 Aligned_cols=149 Identities=14% Similarity=0.167 Sum_probs=114.7
Q ss_pred ccceeEEEEeccccc-cChHHHHHHHHHhhhCC-----CCCh---h-------------hHH-HHhhHH---hcCHHHHH
Q psy6977 74 IQNAEYYYVSGFFLT-VSPESILEVAKVALSCT-----IRNI---N-------------YLH-HRFIYL---VLIDFEAL 127 (239)
Q Consensus 74 ~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~g-----~~~~---p-------------~~~-~~~~~~---~~n~~E~~ 127 (239)
+.+.|++ .+|+... ...+.+.++++.+++.+ ++|+ + .+. .+++++ +||..|++
T Consensus 75 l~~~d~v-~~G~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l~~~ll~~~diitpN~~E~~ 153 (289)
T 3pzs_A 75 LKDCDAV-LSGYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEALPASDMIAPNLLELE 153 (289)
T ss_dssp GGGCCEE-EECCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHHHHTHHHHCSEECCCHHHHH
T ss_pred ccCCCEE-EECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHHHHHhhccCCEEeCCHHHHH
Confidence 3578885 5677654 23467788888877544 4552 1 112 255555 99999999
Q ss_pred HHHHHcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeC-CCcE-------EEEECCeEEEEeccCCCCCCc--ccCCCC
Q psy6977 128 AFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQG-DKPI-------ILSQNGKTTEFPVQRLPAESV--VDTNGA 197 (239)
Q Consensus 128 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G-~~G~-------~~~~~~~~~~~~~~~~~~~~v--vdt~Ga 197 (239)
.|+|....+.++..+++++++++ |++.|++|.| .+|+ +++++++.++++.+++ ++ +|++|+
T Consensus 154 ~L~g~~~~~~~~~~~aa~~l~~~------g~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~dt~Ga 224 (289)
T 3pzs_A 154 QLSGERVENVEQAVQVARSLCAR------GPKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRPLV---DFGKRQPVGV 224 (289)
T ss_dssp HHHTSCCCSHHHHHHHHHHHHTT------SCSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEECC---CCTTSCCTTH
T ss_pred HHhCCCCCCHHHHHHHHHHHHHH------CCCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEeeee---cCCCCCCCcH
Confidence 99997544456677888888875 8999999985 4776 7777777888888887 45 999999
Q ss_pred chhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 198 GDSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 198 GDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
||+|.|+|++++.+|.++++|+++|+++++.++.+
T Consensus 225 GD~f~a~~~~~l~~g~~~~~A~~~A~~~~~~~i~~ 259 (289)
T 3pzs_A 225 GDLTSGLLLVNLLKGEPLDKALEHVTAAVYEVMLK 259 (289)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988777765
No 56
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=99.76 E-value=6.1e-18 Score=135.36 Aligned_cols=146 Identities=20% Similarity=0.161 Sum_probs=115.2
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhCC----CCCh---h-------------hHH-HHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSCT----IRNI---N-------------YLH-HRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g----~~~~---p-------------~~~-~~~~~~---~~n~~E~~~l~~ 131 (239)
+++++++ |+.. +.+.+..+++.+++.+ ++|+ + .+. ++++++ +||..|++.|++
T Consensus 74 ~~d~v~~-G~l~--~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L~g 150 (271)
T 2i5b_A 74 GVDAMKT-GMLP--TVDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQLSG 150 (271)
T ss_dssp CCSEEEE-CCCC--SHHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHHHT
T ss_pred CCCEEEE-CCCC--CHHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHHhC
Confidence 5788887 4422 3577778888887765 3443 1 122 455654 999999999998
Q ss_pred Hc-CCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCC--CcE----EEEECCeEEEEeccCCCCCCcccCCCCchhhhHH
Q psy6977 132 QQ-NFQTEDLHAIALKISNLPKQNPNRERITIITQGD--KPI----ILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGG 204 (239)
Q Consensus 132 ~~-~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~--~G~----~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag 204 (239)
.. ..+.++..++++.+.++ |++.||+|.|. +|+ +++++++.++++++++ +++||+||||+|+|+
T Consensus 151 ~~~~~~~~~~~~~a~~l~~~------g~~~Vvvt~g~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~dt~GaGD~f~a~ 221 (271)
T 2i5b_A 151 MDELKTVDDMIEAAKKIHAL------GAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMI---DTPYTHGAGCTFSAA 221 (271)
T ss_dssp CCCCCSHHHHHHHHHHHHTT------TCSEEEEECGGGSCSSSEEEEEECSSCEEEEEECCC---CCSCCBTHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHh------CCCEEEEcCCCCCCCCceEEEEEeCCeEEEEecccc---CCCCCCChHHHHHHH
Confidence 64 33334677788888874 88999999999 784 6677777888888887 799999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhc
Q psy6977 205 FLSQLIKGEPLSVCIECGVWAAQHIIQVS 233 (239)
Q Consensus 205 ~~~~l~~g~~~~~a~~~a~~~a~~~~~~~ 233 (239)
|++++++|.++++|+++|+++++.++++.
T Consensus 222 ~~~~l~~g~~~~~A~~~A~~~~~~~~~~~ 250 (271)
T 2i5b_A 222 VTAELAKGAEVKEAIYAAKEFITAAIKES 250 (271)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999875
No 57
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=99.71 E-value=1.5e-16 Score=127.84 Aligned_cols=145 Identities=14% Similarity=0.096 Sum_probs=112.3
Q ss_pred ceeEEEEeccccccChHHHHHHHHHhhhC-C---CCCh---h--------------hHHHHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPESILEVAKVALSC-T---IRNI---N--------------YLHHRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-g---~~~~---p--------------~~~~~~~~~---~~n~~E~~~l~~ 131 (239)
+.+.+.+ |+.. +.+.+..+.+..++. + ++|+ + .+.++++++ +||..|++.|+|
T Consensus 74 ~~daik~-G~l~--s~~~i~~v~~~l~~~~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~adiitpN~~Ea~~L~g 150 (282)
T 3h74_A 74 HFDQALI-GYVG--SVALCQQITTYLEQQTLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNTTEAALLTG 150 (282)
T ss_dssp CCSEEEE-CCCC--SHHHHHHHHHHHHHSCCSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCCHHHHHHHHT
T ss_pred ccCEEEE-CCCC--CHHHHHHHHHHHHHCCCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccCCEECCCHHHHHHHhC
Confidence 6788887 5543 455555555555554 2 3443 1 112566665 899999999999
Q ss_pred HcCCCccCHHHHHHHHhcCCCCCCCCc-eEEEEeeCC----CcEEEEE-CCeEEEEeccCCCCCCcccCCCCchhhhHHH
Q psy6977 132 QQNFQTEDLHAIALKISNLPKQNPNRE-RITIITQGD----KPIILSQ-NGKTTEFPVQRLPAESVVDTNGAGDSFVGGF 205 (239)
Q Consensus 132 ~~~~~~~~~~~~~~~l~~~~~~~~~g~-~~vvvt~G~----~G~~~~~-~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~ 205 (239)
....+.++.+++++.+.++ .|+ +.|++|.|. .|+++++ +++.++++.+++ . +||+|+||+|.|+|
T Consensus 151 ~~~~~~~~~~~aa~~L~~~-----~g~~~~Vvvt~G~~~~~~g~~~~~~~~~~~~~~~~~v---~-~dt~GaGD~fsaai 221 (282)
T 3h74_A 151 APYQVTPDLEVILPALQAQ-----LKTGAHAVITDVQRADQIGCAWLDEAGHVQYCGARRL---P-GHYNGTGDTLAAVI 221 (282)
T ss_dssp CCCCSSCCHHHHHHHHHTT-----SCTTCEECEEEEEETTEEEEEEECTTSCEEEEEEECC---S-SCCTTHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH-----hCCCCEEEEEecCCCCceEEEEEeCCCeEEEEEecCC---C-CCCcCHHHHHHHHH
Confidence 7554557899999999883 288 999999984 7888885 666778888776 4 89999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 206 LSQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 206 ~~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
++++++|.++++|+++|+++++.++++
T Consensus 222 ~a~l~~g~~l~~A~~~A~~~~~~ai~~ 248 (282)
T 3h74_A 222 AGLLGRGYPLAPTLARANQWLNMAVAE 248 (282)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888865
No 58
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=99.69 E-value=3.3e-16 Score=126.40 Aligned_cols=146 Identities=14% Similarity=0.164 Sum_probs=109.4
Q ss_pred ceeEEEEeccccccC-hHHHHHHHHHhhhCC---CCCh---hh--------------HHHHhhHH---hcCHHHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVS-PESILEVAKVALSCT---IRNI---NY--------------LHHRFIYL---VLIDFEALAFAK 131 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~g---~~~~---p~--------------~~~~~~~~---~~n~~E~~~l~~ 131 (239)
..+.+.+ |+..... -+.+.++++.+++.+ ++|+ +. +.++++++ +||..|++.|+|
T Consensus 77 ~~~aik~-G~l~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adiitpN~~Ea~~L~g 155 (291)
T 3mbh_A 77 QFDAIYT-GYLGSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVITPNLTELFYLLD 155 (291)
T ss_dssp CCSEEEE-CCCSSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCBHHHHHHHHT
T ss_pred ccCEEEE-CCCCCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEEeCCHHHHHHHhC
Confidence 6778887 6543311 256666777665444 4554 21 12566665 899999999998
Q ss_pred HcCC---CccCHHHHHHHHhcCCCCCCCCceEEEEeeCC-------CcEEEEEC--CeEEEEeccCCCCCCcccCCCCch
Q psy6977 132 QQNF---QTEDLHAIALKISNLPKQNPNRERITIITQGD-------KPIILSQN--GKTTEFPVQRLPAESVVDTNGAGD 199 (239)
Q Consensus 132 ~~~~---~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~-------~G~~~~~~--~~~~~~~~~~~~~~~vvdt~GaGD 199 (239)
.... +.++.+++++.++++ |++.|+||.|. .|++++++ ++.++++.+++ . +||+|+||
T Consensus 156 ~~~~~~~~~~~~~~aa~~L~~~------g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~~---~-~dt~GaGD 225 (291)
T 3mbh_A 156 EPYKADSTDEELKEYLRLLSDK------GPQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPYL---P-AHYPGTGD 225 (291)
T ss_dssp CCCCSCCCHHHHHHHHHHHHHT------SCSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESCC---G-GGSTTHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHhh------CCCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEeccc---C-CCCCChHH
Confidence 7422 345677888888885 89999999653 57778776 35667887765 4 89999999
Q ss_pred hhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 200 SFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 200 af~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
+|.|+|++++++|.++++|+++|+++++.++.+
T Consensus 226 ~f~aai~a~l~~g~~l~~A~~~A~~~~~~ai~~ 258 (291)
T 3mbh_A 226 TFTSVITGSLMQGDSLPMALDRATQFILQGIRA 258 (291)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998887764
No 59
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=99.65 E-value=1e-15 Score=123.93 Aligned_cols=146 Identities=18% Similarity=0.093 Sum_probs=106.1
Q ss_pred cceeEEEEecccccc-ChHHHHHHHHHhhhC-------C--CCCh---h------------hHHHHhhHH---hcCHHHH
Q psy6977 75 QNAEYYYVSGFFLTV-SPESILEVAKVALSC-------T--IRNI---N------------YLHHRFIYL---VLIDFEA 126 (239)
Q Consensus 75 ~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~-------g--~~~~---p------------~~~~~~~~~---~~n~~E~ 126 (239)
.++|++.. |+.... .-+.+.++++..++. . ++|+ + .+.++++++ +||..|+
T Consensus 75 ~~~daV~t-G~l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~~~~~~Ll~~adiitPN~~Ea 153 (300)
T 3zs7_A 75 SNYRYILT-GYINNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVLDAYRELVPLADIVTPNYFEA 153 (300)
T ss_dssp GGCSEEEE-CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHHHHHHHHGGGCSEECCCHHHH
T ss_pred ccCCEEEE-CCCCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHHHHHHHHhhhCCEecCCHHHH
Confidence 57887655 776542 225566666665432 2 3333 1 122566766 9999999
Q ss_pred HHHHHHcCCCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCc-------EEEEEC------CeEEEEeccCCCCCCccc
Q psy6977 127 LAFAKQQNFQTEDLHAIALKISNLPKQNPNRERITIITQGDKP-------IILSQN------GKTTEFPVQRLPAESVVD 193 (239)
Q Consensus 127 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G-------~~~~~~------~~~~~~~~~~~~~~~vvd 193 (239)
+.|+|....+.++..++++.++++ |++.|+||.|..| +++..+ ++.++++.+++ ++ |
T Consensus 154 ~~L~g~~~~~~~~~~~aa~~L~~~------G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v---~~-~ 223 (300)
T 3zs7_A 154 SLLSGVTVNDLSSAILAADWFHNC------GVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRFSGVVPYH---EG-R 223 (300)
T ss_dssp HHHHSSCCCSHHHHHHHHHHHHHH------TCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEEEEEEECC---SS-C
T ss_pred HHHhCCCCCCHHHHHHHHHHHHHh------CCCEEEEecCcCCCCCceEEEEEeccccccCCCeEEEEEeccC---CC-C
Confidence 999987544456777888888885 9999999999988 333334 46778888887 44 8
Q ss_pred CCCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Q psy6977 194 TNGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQV 232 (239)
Q Consensus 194 t~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~~ 232 (239)
++|+||+|.|+|++++ +|.++++|+++|.++...++.+
T Consensus 224 ~~GtGD~fsaal~a~l-~g~~~~~Av~~A~~~v~~~i~~ 261 (300)
T 3zs7_A 224 YTGTGDVFAACLLAFS-HSHPMDVAIGKSMAVLQELIIA 261 (300)
T ss_dssp BTTHHHHHHHHHHHHH-TTSCHHHHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999987776654
No 60
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=99.49 E-value=8e-14 Score=111.30 Aligned_cols=156 Identities=12% Similarity=0.014 Sum_probs=102.4
Q ss_pred hhhhccCCCCCCCchhhhcccceeEEEE-eccccccChHHHHHHHHHhhhCC---CCCh------hhH----HHHhh--H
Q psy6977 55 AAANLFTPDHLHVPENNKLIQNAEYYYV-SGFFLTVSPESILEVAKVALSCT---IRNI------NYL----HHRFI--Y 118 (239)
Q Consensus 55 ~~~~~l~~~~i~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g---~~~~------p~~----~~~~~--~ 118 (239)
+++..+. +++++ ..+.++.++++++ .|.......+.+..+++.+++.+ ++|+ +.. .++++ +
T Consensus 40 Ga~p~m~-~~~~e--~~~~~~~a~~lvi~~G~~~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~~~~~~~~~~~ll~~~~ 116 (272)
T 1ekq_A 40 GASPVMA-YAKEE--VADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVR 116 (272)
T ss_dssp TCEEECC-CCTTT--HHHHHHHSSEEEEECTTCCHHHHHHHHHHHHHHHHTTCCEEEECTTBTTBHHHHHHHHHHHHHSC
T ss_pred CCchhhc-CCHHH--HHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHhcCCeEEEeCCCcCcccchHHHHHHHHccCC
Confidence 4444444 34443 2356678898888 34311112356777788777777 5555 221 15665 3
Q ss_pred H---hcCHHHHHHHHHHc-C--------CCccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCC
Q psy6977 119 L---VLIDFEALAFAKQQ-N--------FQTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRL 186 (239)
Q Consensus 119 ~---~~n~~E~~~l~~~~-~--------~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~ 186 (239)
. +||..|++.|+|.. . .+.++..++++.+.++ +...|++| |..+ ++.++++.++++.+..
T Consensus 117 ~~vitPN~~E~~~L~g~~~~~~~gvd~~~~~~~~~~aa~~l~~~------~~~vVv~~-G~~~-~i~~~~~~~~~~~~~~ 188 (272)
T 1ekq_A 117 LAAIRGNAAEIAHTVGVTDWLIKGVDAGEGGGDIIRLAQQAAQK------LNTVIAIT-GEVD-VIADTSHVYTLHNGHK 188 (272)
T ss_dssp CSEEEECHHHHHHHCC---------------HHHHHHHHHHHHH------HTSEEEEC-SSSE-EEECSSCEEEECCCCG
T ss_pred CeEECCCHHHHHHHhCCCcccccCccCCCCHHHHHHHHHHHHHH------cCCEEEEE-CCCC-EEEeCCEEEEEcCCCc
Confidence 2 99999999998763 2 2334566777777764 22345555 9887 5556666777776554
Q ss_pred CCCCcccCCCCchhhhHHHHHHHHcCCCHHHHHHHHHH
Q psy6977 187 PAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCIECGVW 224 (239)
Q Consensus 187 ~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~ 224 (239)
.+.|++|+||+|.|.+.+.+.+|.++.+|+++|+.
T Consensus 189 ---~~~~ttGaGD~lag~iaa~la~g~~~~~A~~~A~~ 223 (272)
T 1ekq_A 189 ---LLTKVTGAGCLLTSVVGAFCAVEENPLFAAIAAIS 223 (272)
T ss_dssp ---GGGGSTTHHHHHHHHHHHHHTTCSSHHHHHHHHHH
T ss_pred ---cccCccCchHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 67899999999988888888889999999999986
No 61
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=99.36 E-value=3.7e-12 Score=111.15 Aligned_cols=143 Identities=15% Similarity=0.177 Sum_probs=101.6
Q ss_pred ceeEEEEeccccccChHH---HHHHHHHhhhCC---CCCh---h----h---------HH-HHhhHH---hcCHHHHHHH
Q psy6977 76 NAEYYYVSGFFLTVSPES---ILEVAKVALSCT---IRNI---N----Y---------LH-HRFIYL---VLIDFEALAF 129 (239)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~g---~~~~---p----~---------~~-~~~~~~---~~n~~E~~~l 129 (239)
+.+.+.+ |+. +.+. +.++++..++.+ ++|+ . . +. ++++.+ +||..|++.|
T Consensus 91 ~~daIki-G~l---s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~~~~~~~l~~~Ll~~a~iitPN~~Ea~~L 166 (550)
T 3rm5_A 91 KCNVIKT-GML---TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLAGKDIVSLITEKVAPFADILTPNIPECYKL 166 (550)
T ss_dssp CCSEEEE-CSC---CHHHHHHHHHHHHHHGGGSCEEEECCCC---------CTTHHHHHHHHTGGGCSEECCBHHHHHHH
T ss_pred CCCEEEE-CCC---CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCCCHHHHHHHHHHhhCcceEEecCHHHHHHH
Confidence 6888888 443 4544 444454443334 4444 1 1 11 455555 8999999999
Q ss_pred HHHc--CCCccCHHHHHHHHhcCCCCCCCCc-eEEEEeeCCCc--------E--EEE--ECCeEEEEeccCCCCCCcccC
Q psy6977 130 AKQQ--NFQTEDLHAIALKISNLPKQNPNRE-RITIITQGDKP--------I--ILS--QNGKTTEFPVQRLPAESVVDT 194 (239)
Q Consensus 130 ~~~~--~~~~~~~~~~~~~l~~~~~~~~~g~-~~vvvt~G~~G--------~--~~~--~~~~~~~~~~~~~~~~~vvdt 194 (239)
+|.. ..+.++..++++.+.++ |. +.||||.|..+ + +++ .+++.++++.+.+ +++||
T Consensus 167 ~g~~~~i~~~~d~~~aa~~L~~~------g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~~~~~~v---~~~~t 237 (550)
T 3rm5_A 167 LGEERKVNGLQDIFQIAKDLAKI------TKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIFKGNFV---NTTHT 237 (550)
T ss_dssp HSCCCCCCSSHHHHHHHHHHHHH------HCCSCEEEEECC-------CCEEEEEEEETTTTEEEEEEEECC---CCSCC
T ss_pred hCCCCCCCCHHHHHHHHHHHHHh------CCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEEEEecCc---CCCCC
Confidence 9863 23345678888888885 55 89999998763 3 455 3566778888887 67899
Q ss_pred CCCchhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Q psy6977 195 NGAGDSFVGGFLSQLIKGEPLSVCIECGVWAAQHIIQ 231 (239)
Q Consensus 195 ~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~a~~~~~ 231 (239)
+|+||+|.|++++.+++|.++.+|+++|+..-...+.
T Consensus 238 ~GtGD~fsaaiaa~La~G~~l~eAv~~A~~~v~~ai~ 274 (550)
T 3rm5_A 238 HGTGCTLASAIASNLARGYSLPQSVYGGIEYVQNAVA 274 (550)
T ss_dssp BTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred cChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999975544443
No 62
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=98.89 E-value=1.4e-08 Score=80.42 Aligned_cols=140 Identities=11% Similarity=0.067 Sum_probs=94.6
Q ss_pred hhcccceeEEEEecccccc-ChH---HHHHHHHHhhhCC---CCCh------hhH----HHHhhH---H-hcCHHHHHHH
Q psy6977 71 NKLIQNAEYYYVSGFFLTV-SPE---SILEVAKVALSCT---IRNI------NYL----HHRFIY---L-VLIDFEALAF 129 (239)
Q Consensus 71 ~~~~~~~~~~~~~g~~~~~-~~~---~~~~~~~~~~~~g---~~~~------p~~----~~~~~~---~-~~n~~E~~~l 129 (239)
.+.++.++++++. +.+ +.+ .+..+++.+++.+ ++|+ +.. .++++. + +||..|+..|
T Consensus 51 ~~~~~~~dalvi~---~G~~~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~~~~~~~~~~~ll~~~~~vITPN~~E~~~L 127 (265)
T 1v8a_A 51 EEMIRLADAVVIN---IGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISAL 127 (265)
T ss_dssp HHHHHHCSEEEEE---CTTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHH
T ss_pred HHHHHHCCEEEEE---ECCCCHHHHHHHHHHHHHHHHcCCcEEEcCccccccccCHHHHHHHHHhCCcEEcCCHHHHHHH
Confidence 3677889999994 222 332 4555666676666 5665 121 234432 2 8999999999
Q ss_pred HHHcC----CC----c-cCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchh
Q psy6977 130 AKQQN----FQ----T-EDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDS 200 (239)
Q Consensus 130 ~~~~~----~~----~-~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDa 200 (239)
+|... .+ . ++..++++.+.++ +...|++| |..+.+ ++++..++++.... ...+++|+||+
T Consensus 128 ~g~~~~~~gvd~~~~~~~~~~~aa~~la~~------~~~~Vvlk-G~~d~i-~~~~~~~~~~~g~~---~~~~~~GtGD~ 196 (265)
T 1v8a_A 128 LGEEGKTRGVDSLEYGEEEAKKLTMNAARE------FNTTVAVT-GAVDYV-SDGRRTFAVYNGHE---LLGRVTGTGCM 196 (265)
T ss_dssp HHHHC----------CHHHHHHHHHHHHHH------TTSEEEEE-SSSEEE-ECSSCEEEECCCCG---GGGGSTTHHHH
T ss_pred hCCcccccCcCcccccHHHHHHHHHHHHHH------hCcEEEEc-CCCcEE-EcCCEEEEEcCCCc---CcCCccChhHH
Confidence 99742 11 1 4566777888775 33456666 877754 46666777766543 45699999999
Q ss_pred hhHHHHHHHHcCCCHHHHHHHHHHH
Q psy6977 201 FVGGFLSQLIKGEPLSVCIECGVWA 225 (239)
Q Consensus 201 f~ag~~~~l~~g~~~~~a~~~a~~~ 225 (239)
|.|.+...+.+|.+ .+|+..|...
T Consensus 197 Lsg~iaa~lA~g~~-~~Aa~~a~~~ 220 (265)
T 1v8a_A 197 VAALTGAFVAVTEP-LKATTSALVT 220 (265)
T ss_dssp HHHHHHHHHTTSCH-HHHHHHHHHH
T ss_pred HHHHHHHHHhcCCC-HHHHHHHHHH
Confidence 99999999999999 8887776653
No 63
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=98.48 E-value=8.7e-07 Score=71.64 Aligned_cols=140 Identities=14% Similarity=0.114 Sum_probs=82.1
Q ss_pred hcccceeEEEEeccccccCh---HHHHHHHHHhhhCC---CCCh---hhHHH---Hhh--H--H-hcCHHHHHHHHHHcC
Q psy6977 72 KLIQNAEYYYVSGFFLTVSP---ESILEVAKVALSCT---IRNI---NYLHH---RFI--Y--L-VLIDFEALAFAKQQN 134 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~g---~~~~---p~~~~---~~~--~--~-~~n~~E~~~l~~~~~ 134 (239)
..++.++.+.++ ..+..+. +.+.++++..+ .+ ++|+ ..+.. +++ . + +||..|++.|+|...
T Consensus 107 ~~~~~~dav~IG-~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~g~~ll~~~~~~l~~~~~~viTPN~~E~~~L~g~~~ 184 (310)
T 2r3b_A 107 NVVEQADVILIG-PGLGLDATAQQILKMVLAQHQ-KQQWLIIDGSAITLFSQGNFSLTYPEKVVFTPHQMEWQRLSHLPI 184 (310)
T ss_dssp HHHHHCSEEEEC-TTCCSSHHHHHHHHHHHHHCC-TTCEEEEETHHHHHHHHTTCCCSSGGGEEEECCHHHHHHHHCCCG
T ss_pred HHhccCCEEEEe-CCCCCCHHHHHHHHHHHHhcC-CCCcEEEcCCcchhcccchhhhcCCCCEEEcCCHHHHHHHhCCCC
Confidence 455678899984 2121223 34445554443 24 7776 22221 122 2 3 999999999998632
Q ss_pred CCcc-CH-HHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHH-Hc
Q psy6977 135 FQTE-DL-HAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQL-IK 211 (239)
Q Consensus 135 ~~~~-~~-~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l-~~ 211 (239)
.+.+ +. .++++.+ |+ +|+..| .+.++++++.. ++..+.. +..+|.|+||++ +|+++++ .+
T Consensus 185 ~~~~~~~a~~aA~~l---------g~--~VvlKG-~~~vi~~~~~~-~~~~~g~---~~~~t~GtGD~L-ag~Iaa~lA~ 247 (310)
T 2r3b_A 185 EQQTLANNQRQQAKL---------GS--TIVLKS-HRTTIFHAGEP-FQNTGGN---PGMATGGTGDTL-AGIIAGFLAQ 247 (310)
T ss_dssp GGCCHHHHHHHHHHH---------TS--EEEECS-TTCEEECSSSC-EECCCCC---GGGCSTTHHHHH-HHHHHHHHHH
T ss_pred CcccchHHHHHHHHh---------Cc--EEEEeC-CceEEEECCEE-EEECCCC---CCCCCCChHHHH-HHHHHHHHHc
Confidence 2221 23 4444443 22 445456 44555554434 3444554 677899999997 5555555 69
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q psy6977 212 GEPLSVCIECGVWAAQHII 230 (239)
Q Consensus 212 g~~~~~a~~~a~~~a~~~~ 230 (239)
|.++.+|+.+|+.+.+...
T Consensus 248 g~~~~eA~~~A~~~~~~ag 266 (310)
T 2r3b_A 248 FKPTIETIAGAVYLHSLIG 266 (310)
T ss_dssp SCSSHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH
Confidence 9999999999977665543
No 64
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=98.39 E-value=5.7e-07 Score=72.76 Aligned_cols=143 Identities=13% Similarity=0.077 Sum_probs=82.1
Q ss_pred hcccceeEEEEeccccccCh---HHHHHHHHHhhhCC---CCCh---hhHHH---H-hh---HH-hcCHHHHHHHHHHcC
Q psy6977 72 KLIQNAEYYYVSGFFLTVSP---ESILEVAKVALSCT---IRNI---NYLHH---R-FI---YL-VLIDFEALAFAKQQN 134 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~g---~~~~---p~~~~---~-~~---~~-~~n~~E~~~l~~~~~ 134 (239)
..++..+.+.++ ..+..+. +.+.++++.++ .+ ++|+ ..+.. + ++ .+ +||..|++.|++...
T Consensus 121 ~~~~~~dav~IG-~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~g~~ll~~~~~l~L~~~~~viTPN~~E~~~L~g~~~ 198 (311)
T 3bgk_A 121 EQITAADVVLMG-PGLAEDDLAQTTFDVVWQAIE-PKQTLIIDGSAINLLAKRKPAIWPTKQIILTPHQKEWERLSGLTI 198 (311)
T ss_dssp HHHHHCSEEEEC-TTCCSSHHHHHHHHHHHHHCC-TTSEEEEETHHHHHHHHCC-CCCSCSCEEEECCSCC-CTTTCCCS
T ss_pred HHhccCCEEEEc-CCCCCCHHHHHHHHHHHHHcC-CCCeEEEeCChhhhhccChhhcCCCCCEEECCcHHHHHHHhCCCC
Confidence 455678899984 2112233 34444554443 24 7777 22221 1 32 23 999999999987632
Q ss_pred CCccCHHHH-HHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHH-Hc-
Q psy6977 135 FQTEDLHAI-ALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQL-IK- 211 (239)
Q Consensus 135 ~~~~~~~~~-~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l-~~- 211 (239)
.+.+ ++. .+...++. .| .+|+..| .+.++++++.. ++..+.. +..++.|+||+| +|+++++ .+
T Consensus 199 ~~~~--~d~~~~aa~~l~----~g--~~VvlkG-~~~~i~~~~~~-~~~~~~~---~~~~t~GtGD~L-ag~iaa~lA~~ 264 (311)
T 3bgk_A 199 PEQI--EAATQTALAHFP----KE--TILVAKS-HQTKIYQGQKI-GHIQVGG---PYQATGGMGDTL-AGMIAGFVAQF 264 (311)
T ss_dssp TTCC--HHHHHHHHTTSC----TT--CEEEECS-SSCEEEETTEE-EEECCCC---GGGCSTTHHHHH-HHHHHHHHHHC
T ss_pred Ccch--hhHHHHHHHHHh----cC--CEEEEeC-CCeEEEECCEE-EEECCCC---CCCCCCcHHHHH-HHHHHHHHHcc
Confidence 2111 222 22233331 13 3455455 45556664434 4455555 678899999997 6666665 68
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q psy6977 212 GEPLSVCIECGVWAAQHII 230 (239)
Q Consensus 212 g~~~~~a~~~a~~~a~~~~ 230 (239)
|.++.+|+++|+.+.+...
T Consensus 265 g~~~~eA~~~A~~~~~~ag 283 (311)
T 3bgk_A 265 HTDRFEVAAAAVFLHSYIA 283 (311)
T ss_dssp CSCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH
Confidence 9999999999977665543
No 65
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=98.35 E-value=1.1e-06 Score=69.87 Aligned_cols=139 Identities=13% Similarity=0.130 Sum_probs=86.4
Q ss_pred hcccceeEEEEeccccccCh-HHHHHHHHHhhhCC---CCChhhHH-HHh-----hHH-hcCHHHHHHHHHHcCCC-ccC
Q psy6977 72 KLIQNAEYYYVSGFFLTVSP-ESILEVAKVALSCT---IRNINYLH-HRF-----IYL-VLIDFEALAFAKQQNFQ-TED 139 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~g---~~~~p~~~-~~~-----~~~-~~n~~E~~~l~~~~~~~-~~~ 139 (239)
+.+++++++++. +-+.. +...++++.+.+.+ ++|...+. +.+ +.+ +||..|++.|++....+ .++
T Consensus 94 ~~l~~~davviG---PGlg~~~~~~~~~~~~l~~~~p~VlDAdal~~~~l~~~~~~~vlTPN~~E~~~L~g~~~~~~~~d 170 (279)
T 3rpz_A 94 QLEETYRAIAIG---PGLPQTESVQQAVDHVLTADCPVILDAGALAKRTYPKREGPVILTPHPGEFFRMTGVPVNELQKK 170 (279)
T ss_dssp CCSSCCSEEEEC---TTCCCCHHHHHHHHHHTTSSSCEEECGGGCCSCCCCCCSSCEEECCCHHHHHHHHCCCHHHHTTS
T ss_pred hhccCCCEEEEC---CCCCCCHHHHHHHHHHHhhCCCEEEECCccchhhhhhccCCEEEecCHHHHHHHhCCCccchHHH
Confidence 456789999994 33322 34456666665555 56651110 222 123 89999999999853211 246
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHHHH
Q psy6977 140 LHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSVCI 219 (239)
Q Consensus 140 ~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~a~ 219 (239)
..++++.+.++. + .+|+-.|.. .+++++++.+++..+.. +...|.|+||.+.+.+...+.+|.++.+|+
T Consensus 171 ~~~aa~~la~~~-----~--~~VvlKG~~-~vi~~~~g~~~~~~~g~---~~~at~GtGD~Lag~iaa~lA~g~~~~~A~ 239 (279)
T 3rpz_A 171 RAEYAKEWAAQL-----Q--TVIVLKGNQ-TVIAFPDGDCWLNPTGN---GALAKGGTGDTLTGMILGMLCCHEDPKHAV 239 (279)
T ss_dssp HHHHHHHHHHHH-----T--SEEEECSTT-CEEECTTSCEEECCCCC---GGGCSTTHHHHHHHHHHHHHHHCSSHHHHH
T ss_pred HHHHHHHHHHHc-----C--eEEEEeCCC-cEEECCCceEEEeCCCC---CCCCCCChHHHHHHHHHHHHHCCCCHHHHH
Confidence 667777777641 3 244445554 44555554444544444 677899999987555555567999999999
Q ss_pred HHHHH
Q psy6977 220 ECGVW 224 (239)
Q Consensus 220 ~~a~~ 224 (239)
..|+.
T Consensus 240 ~~a~~ 244 (279)
T 3rpz_A 240 LNAVY 244 (279)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98864
No 66
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=98.34 E-value=3.4e-06 Score=72.53 Aligned_cols=142 Identities=12% Similarity=0.110 Sum_probs=89.0
Q ss_pred hcccceeEEEEeccccccC-hHHHHHHHH-HhhhCC---CCCh---hhH-HHHhh-----HH-hcCHHHHHHHHHHcCCC
Q psy6977 72 KLIQNAEYYYVSGFFLTVS-PESILEVAK-VALSCT---IRNI---NYL-HHRFI-----YL-VLIDFEALAFAKQQNFQ 136 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~-~~~~~~~~~-~~~~~g---~~~~---p~~-~~~~~-----~~-~~n~~E~~~l~~~~~~~ 136 (239)
+.++.++++++. +-+. .+....+++ .+++.+ ++|. ..+ .++++ .+ +||..|++.|+|....+
T Consensus 316 ~~~~~~davviG---pGlg~~~~~~~~~~~~l~~~~~pvVlDadgl~~l~~~ll~~~~~~~vlTPN~~E~~~L~g~~~~~ 392 (502)
T 3rss_A 316 ELSKDVDVVAIG---PGLGNNEHVREFVNEFLKTLEKPAVIDADAINVLDTSVLKERKSPAVLTPHPGEMARLVKKTVGD 392 (502)
T ss_dssp HHHTTCSEEEEC---TTCCCSHHHHHHHHHHHHHCCSCEEECHHHHHTCCHHHHHHCSSCEEECCCHHHHHHHHTCCHHH
T ss_pred HHhccCCEEEEe---CCCCCCHHHHHHHHHHHHhcCCCEEEeCcccchhcHHHHhccCCCEEEeCCHHHHHHHhCCCccc
Confidence 566789999994 3222 223334443 344445 7777 111 23443 22 89999999999852111
Q ss_pred -ccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCH
Q psy6977 137 -TEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPL 215 (239)
Q Consensus 137 -~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~ 215 (239)
.++ .+.++.+.++. + .+|+..|.. .++++++..+. ..... +..+|+|+||+|.|.+...+.+|.++
T Consensus 393 ~~~d-~~aa~~la~~~-----~--~~VvlKG~~-~vi~~~~~~~~-~~~g~---~~~at~GsGD~Lag~iaa~lA~g~~~ 459 (502)
T 3rss_A 393 VKYN-YELAEEFAKEN-----D--CVLVLKSAT-TIVTDGEKTLF-NITGN---TGLSKGGSGDVLTGMIAGFIAQGLSP 459 (502)
T ss_dssp HTTC-HHHHHHHHHHH-----T--SEEEECSSS-EEEECSSCEEE-ECCCC---GGGSSTTHHHHHHHHHHHHHHTTCCH
T ss_pred hHHH-HHHHHHHHHHc-----C--CEEEEeCCC-eEEEcCCEEEE-ECCCC---CccccCCchHHHHHHHHHHHhCCCCH
Confidence 234 66777777641 3 355556654 45555554443 33343 67789999998877777777899999
Q ss_pred HHHHHHHHHHHHHH
Q psy6977 216 SVCIECGVWAAQHI 229 (239)
Q Consensus 216 ~~a~~~a~~~a~~~ 229 (239)
.+|+.+|+..-..+
T Consensus 460 ~~Aa~~A~~~hg~A 473 (502)
T 3rss_A 460 LEASTVSVYLHGFA 473 (502)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999987665544
No 67
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=98.29 E-value=1e-05 Score=64.01 Aligned_cols=145 Identities=13% Similarity=0.050 Sum_probs=92.6
Q ss_pred hhhhcccceeEEEEeccccccCh---HHHHHHHHHhhhCC---CCCh------hhH----HHHhh---HH-hcCHHHHHH
Q psy6977 69 ENNKLIQNAEYYYVSGFFLTVSP---ESILEVAKVALSCT---IRNI------NYL----HHRFI---YL-VLIDFEALA 128 (239)
Q Consensus 69 ~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~g---~~~~------p~~----~~~~~---~~-~~n~~E~~~ 128 (239)
+..+..+.++.+++.-- ..+. +.+..+++.+++.+ ++|+ ... .+++. .+ .||..|++.
T Consensus 51 e~~e~~~~a~alvIn~G--~l~~~~~~~~~~a~~~a~~~~~PvVlDPVg~gas~~r~~~~~~Ll~~~~~VItpN~~E~~~ 128 (273)
T 3dzv_A 51 EFPQMFQQTSALVLNLG--HLSQEREQSLLAASDYARQVNKLTVVDLVGYGASDIRNEVGEKLVHNQPTVVKGNLSEMRT 128 (273)
T ss_dssp GHHHHHTTCSEEEEECC--SCCHHHHHHHHHHHHHHHHTTCCEEEECTTTTSCHHHHHHHHHHHHTCCSEEEEEHHHHHH
T ss_pred HHHHHHHHCCeEEEecC--CCChHHHHHHHHHHHHHHHcCCcEEEchhhcCCcccCHHHHHHHHhcCCcEECCCHHHHHH
Confidence 34477788999999521 1333 34555556666666 6665 111 13331 12 899999999
Q ss_pred HHHHcCC----Cc-------c---CHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccC
Q psy6977 129 FAKQQNF----QT-------E---DLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDT 194 (239)
Q Consensus 129 l~~~~~~----~~-------~---~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt 194 (239)
|+|.... +. + +..++++.+.++. +...|++| |... ++++++..+.++.... ....+
T Consensus 129 L~g~~~~~~GVds~~~~~~~~~~~d~~~aa~~la~~~-----~~~~Vvlk-G~~D-~i~dg~~~~~~~~G~~---~~~~v 198 (273)
T 3dzv_A 129 FCQLVSHGRGVDGSPLDQSEEAIEELIQALRQQTQKF-----PQTVFLAT-GIQD-VLVSQEQVIVLQNGVP---ELDCF 198 (273)
T ss_dssp HTTCCCC-------CGGGSHHHHHHHHHHHHHHHHHS-----TTCEEEEE-SSSE-EEECSSCEEEECCCCG---GGGSS
T ss_pred HhCCcccccccccccccchhhhhHHHHHHHHHHHHHh-----CCeEEEEE-CCee-EEEcCCEEEEeCCCCc---ccCCc
Confidence 9986321 11 1 4456677777752 32466666 4443 4445666666655432 45567
Q ss_pred CCCchhhhHHHHHHHHcCCCHHHHHHHHHHH
Q psy6977 195 NGAGDSFVGGFLSQLIKGEPLSVCIECGVWA 225 (239)
Q Consensus 195 ~GaGDaf~ag~~~~l~~g~~~~~a~~~a~~~ 225 (239)
+|.||++.|.+.+.+.+|.++.+|+..|...
T Consensus 199 ~GtGc~Ls~~Iaa~lA~g~~~~~Aa~~A~~~ 229 (273)
T 3dzv_A 199 TGTGDLVGALVAALLGEGNAPMTAAVAAVSY 229 (273)
T ss_dssp TTHHHHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 9999999999999999999999998877653
No 68
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=97.11 E-value=0.0064 Score=47.68 Aligned_cols=139 Identities=9% Similarity=-0.022 Sum_probs=79.1
Q ss_pred hcccceeEEEEeccccccChHHH---HHHHHHhhhCC---CCCh------hhHH----HHhhH---H-hcCHHHHHHHHH
Q psy6977 72 KLIQNAEYYYVSGFFLTVSPESI---LEVAKVALSCT---IRNI------NYLH----HRFIY---L-VLIDFEALAFAK 131 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~g---~~~~------p~~~----~~~~~---~-~~n~~E~~~l~~ 131 (239)
+..+.++.++++- ..++++.. ....+.+.+.+ ++|+ ++.. +++.. + .+|..|+..|.|
T Consensus 52 e~~~~a~al~iNi--Gtl~~~~~~~m~~A~~~A~~~~~PvVLDPVg~gas~~R~~~~~~ll~~~~~vIrgN~sEi~~L~g 129 (265)
T 3hpd_A 52 EMIRLADAVVINI--GTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISALLG 129 (265)
T ss_dssp HHHHHCSEEEEEC--TTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHHHH
T ss_pred HHHHHCCeEEEEC--CCCChHHHHHHHHHHHHHHHcCCCEEEcCCCCCCcHHHHHHHHHHHhcCCcEEcCCHHHHHHHhc
Confidence 6677888888852 22444443 34445555556 6676 2222 44432 2 899999999998
Q ss_pred HcCC---------CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhh
Q psy6977 132 QQNF---------QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFV 202 (239)
Q Consensus 132 ~~~~---------~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ 202 (239)
.... ..++..++++.+.++. | .+|+-.|+.. ++.+++..+.++.-.. .....+|.||.+.
T Consensus 130 ~~~~~~gvds~~~~~~d~~~~a~~lA~~~-----~--~vVvlkG~~d-~I~dg~~~~~~~~G~~---~m~~vtGtGc~Ls 198 (265)
T 3hpd_A 130 EEGKTRGVDSLEYGEEEAKKLTMNAAREF-----N--TTVAVTGAVD-YVSDGRRTFAVYNGHE---LLGRVTGTGCMVA 198 (265)
T ss_dssp HHC----------CHHHHHHHHHHHHHHT-----T--SEEEEESSSE-EEECSSCEEEECCCCG---GGGGSTTHHHHHH
T ss_pred ccCCCCCccCccccHHHHHHHHHHHHHHh-----C--CEEEEeCCCe-EEEcCCEEEEECCCCh---HhhcCCccchHHH
Confidence 6421 2234566777777752 3 3444446554 3445555655544331 2333489999876
Q ss_pred HHHHHHHHcCCCHHHHHHHHHH
Q psy6977 203 GGFLSQLIKGEPLSVCIECGVW 224 (239)
Q Consensus 203 ag~~~~l~~g~~~~~a~~~a~~ 224 (239)
+.+...+..+ +..+|...|+.
T Consensus 199 g~iaa~lA~~-~~~~Aa~~a~~ 219 (265)
T 3hpd_A 199 ALTGAFVAVT-EPLKATTSALV 219 (265)
T ss_dssp HHHHHHHTTS-CHHHHHHHHHH
T ss_pred HHHHHHHhcC-ChHHHHHHHHH
Confidence 5555555555 55555554443
No 69
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=96.92 E-value=0.013 Score=50.78 Aligned_cols=145 Identities=12% Similarity=0.063 Sum_probs=88.6
Q ss_pred hhhhcccc-eeEEEEeccccccChHHHHHHHHHhhhCC---CCCh------hhH----HHHhhH----H-hcCHHHHHHH
Q psy6977 69 ENNKLIQN-AEYYYVSGFFLTVSPESILEVAKVALSCT---IRNI------NYL----HHRFIY----L-VLIDFEALAF 129 (239)
Q Consensus 69 ~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~g---~~~~------p~~----~~~~~~----~-~~n~~E~~~l 129 (239)
+..+..+. ++.+++.--.+ .+.+.+..+++.+++.+ ++|+ ... .++++. + .+|..|++.|
T Consensus 298 E~~e~~~~~~~alvin~G~l-~~~~~~~~a~~~a~~~~~PvVlDPVg~~a~~~r~~~~~~Ll~~~~~~vItpN~~E~~~L 376 (540)
T 3nl6_A 298 EVNDLAAIPHATLLLNTGSV-APPEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGL 376 (540)
T ss_dssp HHHHHTTSTTCEEEEESSCS-CCHHHHHHHHHHHHTTTCCEEEECTTCTTSHHHHHHHHHHTTSCCCSEEEECHHHHHHH
T ss_pred HHHHHHhccCCeEEEeCCCC-CHHHHHHHHHHHHHHcCCCEEEChHHhhcccccHHHHHHHHhhCCCeEECCCHHHHHHH
Confidence 34466777 89999852222 22566777777777776 6666 111 245542 2 8999999999
Q ss_pred HHHcC-----C------CccCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEEC-------------------CeEE
Q psy6977 130 AKQQN-----F------QTEDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQN-------------------GKTT 179 (239)
Q Consensus 130 ~~~~~-----~------~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~-------------------~~~~ 179 (239)
+|... . +.++..++++.+.++. + ..|++ .|....+. ++ +..+
T Consensus 377 ~g~~~~~~~GVds~~~~~~~d~~~aA~~lA~~~-----~-~vVvl-kG~~D~I~-dg~~~~~~~~~~~~~~~~~~~~~~~ 448 (540)
T 3nl6_A 377 AELNKERMKGVDASSGISNELLIQATKIVAFKY-----K-TVAVC-TGEFDFIA-DGTIEGKYSLSKGTNGTSVEDIPCV 448 (540)
T ss_dssp TTC--------------CCHHHHHHHHHHHHHT-----T-SEEEE-CSSSEEEE-ECCGGGBCCSSSCCSSCCTTSSCEE
T ss_pred hCCCcccccccccccccCHHHHHHHHHHHHHHh-----C-CEEEE-cCCCeEEE-CCCccccccccccccccccCCccEE
Confidence 88531 0 1244566777777752 3 34444 46555443 44 3455
Q ss_pred EEeccCCCCCCcccCCCCchhhhHHHHHHHHcCC---CHHHHHHHHHH
Q psy6977 180 EFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGE---PLSVCIECGVW 224 (239)
Q Consensus 180 ~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~---~~~~a~~~a~~ 224 (239)
.++.-.++ -...++|.||++.+.+...+..+. ++.+|+..|+.
T Consensus 449 ~~~~G~~~--~m~~vtGtGc~Lsg~Iaa~la~~~~~~~~~~Aa~~a~~ 494 (540)
T 3nl6_A 449 AVEAGPIE--IMGDITASGCSLGSTIACMIGGQPSEGNLFHAVVAGVM 494 (540)
T ss_dssp EEECSCCG--GGGSSTTHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHH
T ss_pred EECCCChh--hccCccCchHHHHHHHHHHHhcCcCCCCHHHHHHHHHH
Confidence 55543311 344469999999998888888877 57777766654
No 70
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=96.43 E-value=0.014 Score=49.68 Aligned_cols=136 Identities=13% Similarity=0.074 Sum_probs=79.6
Q ss_pred ccceeEEEEecccccc-ChHHHHHHHHHhhhCC-CCCh-----hhHHHHhhH--H-hcCHHHHHHHHHH-----cCCC-c
Q psy6977 74 IQNAEYYYVSGFFLTV-SPESILEVAKVALSCT-IRNI-----NYLHHRFIY--L-VLIDFEALAFAKQ-----QNFQ-T 137 (239)
Q Consensus 74 ~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~g-~~~~-----p~~~~~~~~--~-~~n~~E~~~l~~~-----~~~~-~ 137 (239)
.++++.+++.. -+.. +.+ +..+++. . . ++|. +.+.+.++. + .||.-|++.|++. ...+ .
T Consensus 290 ~~~~~a~~iGP-GlG~~~~~-l~~~l~~--~-p~VlDADaL~~~~~~~~~~~~~VlTPh~~E~~rL~g~~~~~v~~~~~~ 364 (475)
T 3k5w_A 290 PNLLSAFALGM-GLENIPKD-FNRWLEL--A-PCVLDAGVFYHKEILQALEKEAVLTPHPKEFLSLLNLVGINISMLELL 364 (475)
T ss_dssp CSSCSEEEECT-TCSSCCTT-HHHHHHH--S-CEEEEGGGGGSGGGGTTTTSSEEEECCHHHHHHHHHHTSCCCCTTSGG
T ss_pred ccCCCEEEEcC-CCCCCHHH-HHHHHhc--C-CEEEECcccCCchhhhccCCCEEECCCHHHHHHHhCCccCCCCcchhH
Confidence 36788888842 2222 223 4445432 2 5 4444 222222222 2 8999999999997 2211 2
Q ss_pred cCHHHHHHHHhcCCCCCCCCceEEEEeeCCCcEEEEECCeEEEEeccCCCCCCcccCCCCchhhhHHHHHHHHcCCCHHH
Q psy6977 138 EDLHAIALKISNLPKQNPNRERITIITQGDKPIILSQNGKTTEFPVQRLPAESVVDTNGAGDSFVGGFLSQLIKGEPLSV 217 (239)
Q Consensus 138 ~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~vvdt~GaGDaf~ag~~~~l~~g~~~~~ 217 (239)
++..+.++.+.++. |...|++| |..-.+ .+++..+..+ ... .-..|.|.||.+.+.+...+.+|.++.+
T Consensus 365 ~d~~~aa~~la~~~-----g~~~VvlK-G~~~vI-~~~~~~~~~~-~g~---~~mat~GtGdvLsg~Iaa~lA~g~~~~~ 433 (475)
T 3k5w_A 365 DNKLEIARDFSQKY-----PKVVLLLK-GANTLI-AHQGQVFINI-LGS---VALAKAGSGDVLAGLILSLLSQNYTPLD 433 (475)
T ss_dssp GSCC--CHHHHHHC-----TTEEEEEC-SSSEEE-EETTEEEEEC-CCC---GGGCSTTHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHHHHHHHHHHHHc-----CCeEEEEe-CCCCEE-ECCCEEEEEC-CCC---CCCCCCCHHHHHHHHHHHHHHcCCCHHH
Confidence 34456667777641 23445554 554443 3455444333 222 4556799999999999999999999999
Q ss_pred HHHHHHHH
Q psy6977 218 CIECGVWA 225 (239)
Q Consensus 218 a~~~a~~~ 225 (239)
|+..|+..
T Consensus 434 Aa~~a~~l 441 (475)
T 3k5w_A 434 AAINASLA 441 (475)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88876543
No 71
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=96.29 E-value=0.15 Score=43.12 Aligned_cols=31 Identities=32% Similarity=0.492 Sum_probs=22.8
Q ss_pred EEEEeccCCCCCCcccCCCCchhhhHH-HHHHHH
Q psy6977 178 TTEFPVQRLPAESVVDTNGAGDSFVGG-FLSQLI 210 (239)
Q Consensus 178 ~~~~~~~~~~~~~vvdt~GaGDaf~ag-~~~~l~ 210 (239)
...+|..-+ ++.+.|+|-||+|+|| |++.+.
T Consensus 436 v~~iPt~~v--~~P~~TVGLGDtiSagaF~~~l~ 467 (474)
T 3drw_A 436 VVVIPTRLV--QNPVLTVGLGDTISAGAFLTYLE 467 (474)
T ss_dssp EEEEECCCC--SSCSCCTTHHHHHHHHHHHHHHH
T ss_pred EEEEehhhh--cCCCccccCCchhhHHHHHHHHH
Confidence 334555544 4788999999999998 777663
No 72
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=80.17 E-value=1.5 Score=36.97 Aligned_cols=31 Identities=26% Similarity=0.412 Sum_probs=16.0
Q ss_pred EEEEeccCCCCCCcccCCCCchhh-hHHHHHHHH
Q psy6977 178 TTEFPVQRLPAESVVDTNGAGDSF-VGGFLSQLI 210 (239)
Q Consensus 178 ~~~~~~~~~~~~~vvdt~GaGDaf-~ag~~~~l~ 210 (239)
...+|..-+ ++.+.|+|.||+| ++||++.+.
T Consensus 424 i~~~P~lv~--~~P~~TVGLGDtISa~gfv~~l~ 455 (457)
T 1l2l_A 424 LTFIPTKVV--KKPKSTVGIGDTISSSAFVSEFS 455 (457)
T ss_dssp EEEEECC-----------CTTHHHHHHHHHHHHH
T ss_pred EEEEehhhc--CCCCceecCCcchhhHHHHHHHh
Confidence 334444444 4888999999999 668998875
No 73
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=77.00 E-value=2.1 Score=36.12 Aligned_cols=32 Identities=19% Similarity=0.327 Sum_probs=23.6
Q ss_pred EEEEeccCCCCCCcccCCCCchhh-hHHHHHHHHc
Q psy6977 178 TTEFPVQRLPAESVVDTNGAGDSF-VGGFLSQLIK 211 (239)
Q Consensus 178 ~~~~~~~~~~~~~vvdt~GaGDaf-~ag~~~~l~~ 211 (239)
...+|..-+ ++.+.|+|.||+| ++||++.+..
T Consensus 421 i~~~P~lv~--~~P~~TVGlGDtiSa~gf~~~l~~ 453 (455)
T 1ua4_A 421 IAFIPTKIV--AKPKSTVGIGDTISSSAFIGEFSF 453 (455)
T ss_dssp EEEEECBCC--SSCSCCTTHHHHHHHHHHHHHHHT
T ss_pred EEEEehhhc--CCCCceecCCcchhhHHHHHHHHh
Confidence 444454444 4888999999999 6699988754
No 74
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=75.49 E-value=2 Score=36.34 Aligned_cols=22 Identities=32% Similarity=0.443 Sum_probs=18.9
Q ss_pred CCcccCCCCchhh-hHHHHHHHH
Q psy6977 189 ESVVDTNGAGDSF-VGGFLSQLI 210 (239)
Q Consensus 189 ~~vvdt~GaGDaf-~ag~~~~l~ 210 (239)
++.+.|+|.||+| ++||++.+.
T Consensus 441 ~~P~~TVGLGDtISa~gfv~~l~ 463 (467)
T 1gc5_A 441 ASPKSTVGIGDTISSSAFVSEFG 463 (467)
T ss_dssp SSCSCCSSHHHHHHHHHHHHHHH
T ss_pred CCCCceecCCcchhhHHHHHHHH
Confidence 4888999999999 669998875
No 75
>2wgo_A Ranaspumin-2, RSN-2; cystatin fold, surfactant protein; NMR {Engystomops pustulosus}
Probab=36.18 E-value=29 Score=20.78 Aligned_cols=46 Identities=13% Similarity=0.130 Sum_probs=30.8
Q ss_pred CCchHHHHHHHHH-----hcCCeeeEEec--CCCCceeEEEEEecCCCceeEe
Q psy6977 6 KDNYSDILESKAS-----EFGLVVKYQHH--DTEPTGTCAVLITDNGKARSLV 51 (239)
Q Consensus 6 ~D~~g~~i~~~l~-----~~gI~~~~v~~--~~~~t~~~~~~~~~~~~~r~~~ 51 (239)
++-+|..++..++ .+||++.-+.+ .....+.+++.+++.++++.-+
T Consensus 20 dnlfgkelldkfqddikdkygvdtkdlkilktsedkrfyyvsvdagdgekckf 72 (98)
T 2wgo_A 20 DNLFGKELLDKFQDDIKDKYGVDTKDLKILKTSEDKRFYYVSVDAGDGEKCKF 72 (98)
T ss_dssp CHHHHHHHHHHSHHHHHHHTCCCTTTCEEEEEEECSSEEEEEEECSSSCEEEE
T ss_pred hhhhhHHHHHHHHHhhhhhhCCCccceeeeeccCCceEEEEEEecCCCceeeE
Confidence 3457777777665 58999876553 2335668888888877776443
No 76
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=34.35 E-value=2.1e+02 Score=24.05 Aligned_cols=61 Identities=13% Similarity=0.054 Sum_probs=34.0
Q ss_pred hcccceeEEEEeccccccCh---HHHHHHHHH---hhhCC---------CCChhhHH---HHhhHH---hcCHHHHHHHH
Q psy6977 72 KLIQNAEYYYVSGFFLTVSP---ESILEVAKV---ALSCT---------IRNINYLH---HRFIYL---VLIDFEALAFA 130 (239)
Q Consensus 72 ~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~---~~~~g---------~~~~p~~~---~~~~~~---~~n~~E~~~l~ 130 (239)
+...++|.+++||++.--.. +.....++. ....+ ..|..... .++|++ -+|++|+..+.
T Consensus 221 e~~~~~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~L~~~~~~iH~ElAs~~~~~~~~~i~~ilp~vDSlGmNE~EL~~l~ 300 (455)
T 1ua4_A 221 EVIKNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNEREIPVHLEFAFTPDEKVREEILNVLGMFYSVGLNEVELASIM 300 (455)
T ss_dssp HHGGGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHHTTCCEEEECCCCCCHHHHHHHHHHGGGCSEEEECHHHHHHHH
T ss_pred hhccCCcEEEEechhcccccchHHHHHHHHHHHHHhcCCCceEEEEeCCccCHHHHHHHHhhhccCcccccCHHHHHHHH
Confidence 33445999999998764221 333333332 23333 11111112 566665 79999999887
Q ss_pred HH
Q psy6977 131 KQ 132 (239)
Q Consensus 131 ~~ 132 (239)
..
T Consensus 301 ~~ 302 (455)
T 1ua4_A 301 EI 302 (455)
T ss_dssp HH
T ss_pred HH
Confidence 76
No 77
>1j6w_A Autoinducer-2 production protein LUXS; alpha-beta fold, signaling protein; 2.10A {Haemophilus influenzae} SCOP: d.185.1.2 PDB: 1joe_A
Probab=32.47 E-value=65 Score=23.15 Aligned_cols=34 Identities=12% Similarity=0.010 Sum_probs=25.9
Q ss_pred HHHHHHHHHhcCCeeeEEecCCCCceeEEEEEec
Q psy6977 10 SDILESKASEFGLVVKYQHHDTEPTGTCAVLITD 43 (239)
Q Consensus 10 g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~ 43 (239)
+.++++++...++.+-++-.-++.||+|.+++..
T Consensus 61 A~~lRnh~~~~~~~iId~sPMGCrTGFYlil~G~ 94 (175)
T 1j6w_A 61 AGFMRDHLNGDSIEIIDISPMGCRTGFYMSLIGT 94 (175)
T ss_dssp HHHHHHHHCBTTBEEEEEEECTTSSEEEEEEESC
T ss_pred HHHHhhCccCCCCeEEEeCCcCcccccEEEEeCC
Confidence 4567777776677777777779999999888764
No 78
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=28.69 E-value=1.3e+02 Score=25.22 Aligned_cols=86 Identities=10% Similarity=0.032 Sum_probs=43.5
Q ss_pred CCceeEeechhhhhccCCC-CCCCchhhhcccceeEEEEeccccccC---hH---HHHHHHHHhhhCC---------CCC
Q psy6977 45 GKARSLVANLAAANLFTPD-HLHVPENNKLIQNAEYYYVSGFFLTVS---PE---SILEVAKVALSCT---------IRN 108 (239)
Q Consensus 45 ~~~r~~~~~~~~~~~l~~~-~i~~~~~~~~~~~~~~~~~~g~~~~~~---~~---~~~~~~~~~~~~g---------~~~ 108 (239)
..+|.++..+..+..+... ++. ....+...++|.+++||++.--. +. ...+.++.....+ ..|
T Consensus 197 raNRfI~s~D~~N~~l~~~e~f~-~~l~e~~~~~d~~vlSG~q~l~~~~~~~~~~~~~~~i~~L~~~~~~iH~E~As~~~ 275 (457)
T 1l2l_A 197 RENRFIGAADDYNPILYVREEWI-ERFEEIAKRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLGIRAHLEFAFTPD 275 (457)
T ss_dssp SCEEEEEEECSSGGGTCCCHHHH-HSHHHHHTTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHHTTCEEEEECCCCSS
T ss_pred CCCeEEEEcCCCCCCCcccHHHH-HHHHhhccCCCEEEEeccccccccchhhhHHHHHHHHHHhcCCCCeEEEEECCccc
Confidence 4556665554444444321 111 11223335699999999876433 22 1222222223333 222
Q ss_pred h----hhHHHHhhHH---hcCHHHHHHHHHH
Q psy6977 109 I----NYLHHRFIYL---VLIDFEALAFAKQ 132 (239)
Q Consensus 109 ~----p~~~~~~~~~---~~n~~E~~~l~~~ 132 (239)
. ..+ .++|++ -+|++|+..+...
T Consensus 276 ~~l~~~i~-~ilp~vDSlGmNEqELa~l~~~ 305 (457)
T 1l2l_A 276 EVVRLEIV-KLLKHFYSVGLNEVELASVVSV 305 (457)
T ss_dssp HHHHHHHH-HHGGGCSEEEECHHHHHHHHHH
T ss_pred HHHHHHHH-hhccccccCccCHHHHHHHHHH
Confidence 2 223 666766 6999999886554
No 79
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=28.68 E-value=1.3e+02 Score=21.73 Aligned_cols=27 Identities=22% Similarity=0.281 Sum_probs=17.6
Q ss_pred CCcccCCchHHHHHHHHHhcCCeeeEE
Q psy6977 1 MGAVGKDNYSDILESKASEFGLVVKYQ 27 (239)
Q Consensus 1 i~~vG~D~~g~~i~~~l~~~gI~~~~v 27 (239)
|+.+|-...|..+...|.+.|.++...
T Consensus 22 I~iiG~G~mG~~la~~l~~~g~~V~~~ 48 (209)
T 2raf_A 22 ITIFGKGNMGQAIGHNFEIAGHEVTYY 48 (209)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEE
Confidence 355677777777777777777554443
No 80
>1ztd_A Hypothetical protein PFU-631545-001; structural genomics, southeast collaboratory for structural genomics, secsg; 2.00A {Pyrococcus furiosus} SCOP: a.149.1.2
Probab=26.83 E-value=60 Score=21.30 Aligned_cols=30 Identities=20% Similarity=0.188 Sum_probs=25.2
Q ss_pred ccCCCCchhhhHHHHHHHHcC-CCHHHHHHH
Q psy6977 192 VDTNGAGDSFVGGFLSQLIKG-EPLSVCIEC 221 (239)
Q Consensus 192 vdt~GaGDaf~ag~~~~l~~g-~~~~~a~~~ 221 (239)
.|-.|-||..-|-+.|+++.| .+.+||++.
T Consensus 64 ~DKh~kGd~aEA~iAyAWleG~is~eEavei 94 (133)
T 1ztd_A 64 VDKHAKGDYAEALIAKAWLMGLISEREAVEI 94 (133)
T ss_dssp GGTTCHHHHHHHHHHHHHHTTSSCHHHHHHH
T ss_pred ccccCccHHHHHHHHHHHHhccccHHHHHHH
Confidence 366799999999999999988 488888764
No 81
>1bts_A BAND 3 anion transport protein; transmembrane protein; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 1btt_A
Probab=23.01 E-value=51 Score=15.47 Aligned_cols=15 Identities=27% Similarity=0.359 Sum_probs=8.9
Q ss_pred hhHHHHHHHHcCCCH
Q psy6977 201 FVGGFLSQLIKGEPL 215 (239)
Q Consensus 201 f~ag~~~~l~~g~~~ 215 (239)
.++|+++++..|.++
T Consensus 11 ai~Gi~f~lf~gQPL 25 (26)
T 1bts_A 11 AVQGILFALLGAXXX 25 (26)
T ss_dssp HHHHHHHHHTTC---
T ss_pred HHHHHHHHHHhcccC
Confidence 467778888777664
No 82
>1vmg_A Hypothetical protein SSO3215; 13816655, MAZG nucleotide pyrophosphohydrolase, structural G JCSG, protein structure initiative, PSI; HET: MSE; 1.46A {Sulfolobus solfataricus} SCOP: a.204.1.2
Probab=21.99 E-value=80 Score=20.06 Aligned_cols=26 Identities=8% Similarity=0.014 Sum_probs=22.4
Q ss_pred CchhhhHHHHHHHHcCCCHHHHHHHH
Q psy6977 197 AGDSFVGGFLSQLIKGEPLSVCIECG 222 (239)
Q Consensus 197 aGDaf~ag~~~~l~~g~~~~~a~~~a 222 (239)
-||.+...+..+...|.++++|++..
T Consensus 67 LgDvLf~lv~lA~~lgiD~e~al~~k 92 (95)
T 1vmg_A 67 LADVIAWTVSIANLEGIDIEEALKKK 92 (95)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHH
Confidence 48999999988888999999998764
No 83
>2q5z_A MAZG, hypothetical protein; NTP-ppase, hydrolase; 2.30A {Vibrio SP}
Probab=21.98 E-value=97 Score=20.27 Aligned_cols=28 Identities=18% Similarity=-0.124 Sum_probs=24.3
Q ss_pred CchhhhHHHHHHHHcCCCHHHHHHHHHH
Q psy6977 197 AGDSFVGGFLSQLIKGEPLSVCIECGVW 224 (239)
Q Consensus 197 aGDaf~ag~~~~l~~g~~~~~a~~~a~~ 224 (239)
-||.+...+..+...|.++++|++..+.
T Consensus 79 LgDvL~~l~~LA~~lgiDle~al~~k~~ 106 (114)
T 2q5z_A 79 LYDVLYYVCALANIHGVNLEKTRELKEV 106 (114)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHHHH
Confidence 4999999998888899999999987654
No 84
>2gta_A Hypothetical protein YPJD; pyrophosphatase, NESG, structural genomics, PSI, protein structure initiative; 2.90A {Bacillus subtilis} SCOP: a.204.1.2
Probab=21.69 E-value=88 Score=20.64 Aligned_cols=28 Identities=11% Similarity=-0.120 Sum_probs=24.5
Q ss_pred CchhhhHHHHHHHHcCCCHHHHHHHHHH
Q psy6977 197 AGDSFVGGFLSQLIKGEPLSVCIECGVW 224 (239)
Q Consensus 197 aGDaf~ag~~~~l~~g~~~~~a~~~a~~ 224 (239)
-||.+...+..+-..|.++++|++..+.
T Consensus 67 LGDvLf~lv~lA~~l~idle~al~~~~~ 94 (119)
T 2gta_A 67 IGDVLFVLVCLANSLDISLEEAHDRVMH 94 (119)
T ss_dssp HHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHHHH
Confidence 4999999999999999999999987654
No 85
>3cra_A Protein MAZG; tandem-repeat domain, hydrolase; 2.10A {Escherichia coli} PDB: 3crc_A*
Probab=21.13 E-value=88 Score=24.20 Aligned_cols=28 Identities=11% Similarity=0.032 Sum_probs=24.8
Q ss_pred CchhhhHHHHHHHHcCCCHHHHHHHHHH
Q psy6977 197 AGDSFVGGFLSQLIKGEPLSVCIECGVW 224 (239)
Q Consensus 197 aGDaf~ag~~~~l~~g~~~~~a~~~a~~ 224 (239)
-||.+++.+..+...|.++++|++.++.
T Consensus 196 lGDlLFalVnlAR~~gIDpE~ALr~an~ 223 (265)
T 3cra_A 196 MGDLLFATVNLARHLGTKAEIALQKANE 223 (265)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 4899999998888999999999998775
No 86
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=20.99 E-value=1.4e+02 Score=23.06 Aligned_cols=27 Identities=11% Similarity=0.146 Sum_probs=19.3
Q ss_pred CCccc-CCchHHHHHHHHHhcCCeeeEE
Q psy6977 1 MGAVG-KDNYSDILESKASEFGLVVKYQ 27 (239)
Q Consensus 1 i~~vG-~D~~g~~i~~~l~~~gI~~~~v 27 (239)
|+.+| -...|..+...|.+.|.++..+
T Consensus 24 I~iIGg~G~mG~~la~~l~~~G~~V~~~ 51 (298)
T 2pv7_A 24 IVIVGGYGKLGGLFARYLRASGYPISIL 51 (298)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCEEEE
T ss_pred EEEEcCCCHHHHHHHHHHHhCCCeEEEE
Confidence 35677 7788888888888877655443
No 87
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=20.63 E-value=1.3e+02 Score=19.70 Aligned_cols=34 Identities=15% Similarity=-0.034 Sum_probs=27.6
Q ss_pred hhhhcccceeEEEEeccccccChHHHHHHHHHhhhCC
Q psy6977 69 ENNKLIQNAEYYYVSGFFLTVSPESILEVAKVALSCT 105 (239)
Q Consensus 69 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g 105 (239)
++|+...+-|++++ ...-+.+.+.+.++.++..|
T Consensus 70 eiwerypqldvvvi---vttddkewikdfieeakerg 103 (162)
T 2l82_A 70 EIWERYPQLDVVVI---VTTDDKEWIKDFIEEAKERG 103 (162)
T ss_dssp HHHHHCTTCCEEEE---EECCCHHHHHHHHHHHHHTT
T ss_pred HHHHhCCCCcEEEE---EecCcHHHHHHHHHHHHhcC
Confidence 46778888999988 33456788999999999999
Done!