RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy6978
         (112 letters)



>d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 342

 Score = 95.6 bits (236), Expect = 2e-25
 Identities = 44/72 (61%), Positives = 60/72 (83%)

Query: 4  VREGLLLGLGNPLLDISATVDASFLEKYNLKANNAILADEKHKDLYEDLIKNNNVDYIAG 63
          VRE +L G+GNPLLDISA VD  FL+KY+LK N+ ILA++KHK+L+++L+K   V+Y AG
Sbjct: 1  VRENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAG 60

Query: 64 GSTQNTLRVAQV 75
          GSTQN+++VAQ 
Sbjct: 61 GSTQNSIKVAQW 72


>d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii
          [TaxId: 5811]}
          Length = 350

 Score = 79.1 bits (193), Expect = 2e-19
 Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)

Query: 9  LLGLGNPLLDISATVDASFLEKYNLKANNAILADEKHKDLYEDLIKNNNVDYIAGGSTQN 68
          +  +GNP+LD+ A V +SFL+++ LK  +A LA  +   +Y  L    N   + GGS  N
Sbjct: 6  VFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTL-DQFNPTSLPGGSALN 64

Query: 69 TLRVAQ 74
          ++RV Q
Sbjct: 65 SVRVVQ 70


>d1cyga3 b.71.1.1 (A:403-491) Cyclodextrin glycosyltransferase
          {Bacillus stearothermophilus [TaxId: 1422]}
          Length = 89

 Score = 23.6 bits (51), Expect = 3.5
 Identities = 7/40 (17%), Positives = 13/40 (32%)

Query: 29 EKYNLKANNAILADEKHKDLYEDLIKNNNVDYIAGGSTQN 68
            Y++      L    + D    L+  N +   + GS   
Sbjct: 34 SNYSITGLFTALPAGTYTDQLGGLLDGNTIQVGSNGSVNA 73


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.313    0.131    0.341 

Gapped
Lambda     K      H
   0.267   0.0622    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 355,734
Number of extensions: 13470
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 27
Number of HSP's successfully gapped: 9
Length of query: 112
Length of database: 2,407,596
Length adjustment: 71
Effective length of query: 41
Effective length of database: 1,432,766
Effective search space: 58743406
Effective search space used: 58743406
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 47 (22.1 bits)