BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6979
(167 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9GUM2|BRE4_CAEEL Beta-1,4-N-acetylgalactosaminyltransferase bre-4 OS=Caenorhabditis
elegans GN=bre-4 PE=1 SV=1
Length = 383
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 57/71 (80%)
Query: 96 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTCPGMPRHMSVAVDSMNYRLP 155
FNR L NVGY A ++ + CFIFHDVDL+PEDDRNLYTCP PRHMSVA+D NY+LP
Sbjct: 194 FNRGKLMNVGYDVASRLYPWQCFIFHDVDLLPEDDRNLYTCPIQPRHMSVAIDKFNYKLP 253
Query: 156 YASLFGGVSNI 166
Y+++FGG+S +
Sbjct: 254 YSAIFGGISAL 264
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
Query: 27 KDQL--VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKANP 81
KD L +NGFSN++WGWGGEDDD++ R AGL++ RYP IA+Y M++H E NP
Sbjct: 266 KDHLKKINGFSNDFWGWGGEDDDLATRTSMAGLKVSRYPTQIARYKMIKHSTEATNP 322
>sp|A8Y1P7|BRE4_CAEBR Beta-1,4-N-acetylgalactosaminyltransferase bre-4 OS=Caenorhabditis
briggsae GN=bre-4 PE=3 SV=1
Length = 384
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 57/71 (80%)
Query: 96 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTCPGMPRHMSVAVDSMNYRLP 155
FNR L NVGY A ++ + CFIFHDVDL+PEDDRNLYTCP PRHMSVA+D +Y+LP
Sbjct: 195 FNRGKLMNVGYDVASRLYPWQCFIFHDVDLLPEDDRNLYTCPIQPRHMSVAIDKFHYKLP 254
Query: 156 YASLFGGVSNI 166
Y+++FGG+S +
Sbjct: 255 YSAIFGGISAL 265
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 40/53 (75%)
Query: 29 QLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKANP 81
+ +NGFSN++WGWGGEDDD++ R AGL++ RYP IA+Y M++H E NP
Sbjct: 271 KAINGFSNDFWGWGGEDDDLATRTSQAGLKVSRYPAQIARYKMIKHSTEATNP 323
>sp|O60513|B4GT4_HUMAN Beta-1,4-galactosyltransferase 4 OS=Homo sapiens GN=B4GALT4 PE=1
SV=1
Length = 344
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 54/76 (71%)
Query: 91 SEGHPFNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTCPGMPRHMSVAVDSM 150
+EG FNRA L NVGY EA+K +DCFIFHDVDL+PE+D NLY C P+H+ V +S
Sbjct: 163 AEGKKFNRAKLLNVGYLEALKEENWDCFIFHDVDLVPENDFNLYKCEEHPKHLVVGRNST 222
Query: 151 NYRLPYASLFGGVSNI 166
YRL Y+ FGGV+ +
Sbjct: 223 GYRLRYSGYFGGVTAL 238
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 31 VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKAN 80
VNGFSN YWGWGGEDDD+ RV+ ++I R P++ KY+M+ H ++K N
Sbjct: 246 VNGFSNNYWGWGGEDDDLRLRVELQRMKISRPLPEVGKYTMVFHTRDKGN 295
>sp|O88419|B4GT6_RAT Beta-1,4-galactosyltransferase 6 OS=Rattus norvegicus GN=B4galt6
PE=1 SV=1
Length = 382
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 58/90 (64%)
Query: 77 EKANPQSSFFPHSISEGHPFNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTC 136
+K + +F+ + PFNRA LFNVG+ EA+K R +DC IFHDVD +PE+DRN Y C
Sbjct: 183 QKQRLEFAFYVIEQTGTQPFNRAMLFNVGFKEAMKDRAWDCVIFHDVDHLPENDRNYYGC 242
Query: 137 PGMPRHMSVAVDSMNYRLPYASLFGGVSNI 166
MPRH + +D Y LPY FGGVS +
Sbjct: 243 GEMPRHFAAKLDKYMYILPYKEFFGGVSGL 272
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 31 VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRH 74
+NGF N +WGWGGEDDD+ NRV +G + R D+ KY+ + H
Sbjct: 280 INGFPNAFWGWGGEDDDLWNRVHYSGYNVTRPEGDLGKYTSIPH 323
>sp|Q9WVK5|B4GT6_MOUSE Beta-1,4-galactosyltransferase 6 OS=Mus musculus GN=B4galt6 PE=2
SV=1
Length = 382
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 58/90 (64%)
Query: 77 EKANPQSSFFPHSISEGHPFNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTC 136
+K + +F+ + PFNRA LFNVG+ EA+K R +DC IFHDVD +PE+DRN Y C
Sbjct: 183 QKQRLEFAFYVIEQTGTQPFNRAMLFNVGFKEAMKDRAWDCVIFHDVDHLPENDRNYYGC 242
Query: 137 PGMPRHMSVAVDSMNYRLPYASLFGGVSNI 166
MPRH + +D Y LPY FGGVS +
Sbjct: 243 GEMPRHFAAKLDKYMYILPYKEFFGGVSGL 272
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%)
Query: 31 VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRH 74
+NGF N +WGWGGEDDD+ NRV AG + R D+ KY + H
Sbjct: 280 INGFPNAFWGWGGEDDDLWNRVHYAGYNVTRPEGDLGKYISIPH 323
>sp|Q9JMK0|B4GT5_MOUSE Beta-1,4-galactosyltransferase 5 OS=Mus musculus GN=B4galt5 PE=2
SV=2
Length = 388
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Query: 71 MLRH---RKEKANPQSSFFPHSISEGHPFNRASLFNVGYAEAIKIREFDCFIFHDVDLIP 127
+LRH ++ Q +F+ PFNRA LFNVG+ EA+K ++DC IFHDVD IP
Sbjct: 180 LLRHLLPMLQRQRLQFAFYVIEQVGTQPFNRAMLFNVGFQEAMKDLDWDCLIFHDVDHIP 239
Query: 128 EDDRNLYTCPGMPRHMSVAVDSMNYRLPYASLFGGVSNI 166
E DRN Y C MPRH + +D Y LPY FGGVS +
Sbjct: 240 ESDRNYYGCGQMPRHFATKLDKYMYLLPYTEFFGGVSGL 278
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%)
Query: 31 VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRH 74
+NGF N +WGWGGEDDD+ NRV+ AG + R D KY + H
Sbjct: 286 INGFPNAFWGWGGEDDDLWNRVQNAGYSVSRPEGDTGKYKSIPH 329
>sp|O43286|B4GT5_HUMAN Beta-1,4-galactosyltransferase 5 OS=Homo sapiens GN=B4GALT5 PE=2
SV=1
Length = 388
Score = 96.7 bits (239), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%)
Query: 77 EKANPQSSFFPHSISEGHPFNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTC 136
++ Q +F+ PFNRA LFNVG+ EA+K ++DC IFHDVD IPE DRN Y C
Sbjct: 189 QRQRLQFAFYVVEQVGTQPFNRAMLFNVGFQEAMKDLDWDCLIFHDVDHIPESDRNYYGC 248
Query: 137 PGMPRHMSVAVDSMNYRLPYASLFGGVSNI 166
MPRH + +D Y LPY FGGVS +
Sbjct: 249 GQMPRHFATKLDKYMYLLPYTEFFGGVSGL 278
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%)
Query: 31 VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRH 74
+NGF N +WGWGGEDDD+ NRV+ AG + R D KY + H
Sbjct: 286 INGFPNAFWGWGGEDDDLWNRVQNAGYSVSRPEGDTGKYKSIPH 329
>sp|Q80WN7|B4GT4_CRIGR Beta-1,4-galactosyltransferase 4 OS=Cricetulus griseus GN=B4GALT4
PE=2 SV=1
Length = 344
Score = 96.7 bits (239), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 53/71 (74%)
Query: 96 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTCPGMPRHMSVAVDSMNYRLP 155
FNRA L NVGY EA+K + +DCFIFHDVDL+PE+D NLYTC P+H+ V +S YRL
Sbjct: 168 FNRAKLLNVGYLEALKEQNWDCFIFHDVDLVPENDFNLYTCGDQPKHLVVGRNSTGYRLR 227
Query: 156 YASLFGGVSNI 166
Y+ FGGV+ +
Sbjct: 228 YSKYFGGVTAL 238
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 31 VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKAN 80
VNGFSN YWGWGGEDDD+ RV+ ++I R PD+ KY+M+ H ++K N
Sbjct: 246 VNGFSNNYWGWGGEDDDLRLRVELHKMKISRPNPDVGKYTMIFHTRDKGN 295
>sp|Q66HH1|B4GT4_RAT Beta-1,4-galactosyltransferase 4 OS=Rattus norvegicus GN=B4galt4
PE=2 SV=1
Length = 344
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 52/71 (73%)
Query: 96 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTCPGMPRHMSVAVDSMNYRLP 155
FNRA L NVGY EA+K +DCFIFHDVDL+PE+D NLYTC P+H+ V +S YRL
Sbjct: 168 FNRAKLLNVGYLEALKEENWDCFIFHDVDLVPENDFNLYTCGDQPKHLVVGRNSTGYRLR 227
Query: 156 YASLFGGVSNI 166
Y+ FGGV+ +
Sbjct: 228 YSKYFGGVTAL 238
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 31 VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKAN 80
VNGFSN YWGWGGEDDD+ RV+ ++I R PD+ KY+M+ H ++K N
Sbjct: 246 VNGFSNNYWGWGGEDDDLRLRVELHKMKISRPKPDVGKYTMIFHTRDKGN 295
>sp|Q9JJ04|B4GT4_MOUSE Beta-1,4-galactosyltransferase 4 OS=Mus musculus GN=B4galt4 PE=2
SV=1
Length = 344
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 52/71 (73%)
Query: 96 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTCPGMPRHMSVAVDSMNYRLP 155
FNRA L NVGY EA+K +DCF+FHDVDL+PE+D NLYTC P+H+ V +S YRL
Sbjct: 168 FNRAKLLNVGYLEALKEENWDCFVFHDVDLVPENDFNLYTCGDQPKHLVVGRNSTGYRLR 227
Query: 156 YASLFGGVSNI 166
Y+ FGGV+ +
Sbjct: 228 YSKYFGGVTAL 238
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 31 VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKAN 80
VNGFSN YWGWGGEDDD+ RV+ ++I R PD+ KY+M+ H ++K N
Sbjct: 246 VNGFSNNYWGWGGEDDDLRLRVELHKMKISRPKPDVGKYTMIFHTRDKGN 295
>sp|Q9Z2Y2|B4GT2_MOUSE Beta-1,4-galactosyltransferase 2 OS=Mus musculus GN=B4galt2 PE=2
SV=1
Length = 369
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 96 FNRASLFNVGYAEAIKI-REFDCFIFHDVDLIPEDDRNLYTCPGMPRHMSVAVDSMNYRL 154
FNRA L NVG+ EA+K +DCFIF DVDL+P DDRNLY C PRH ++A+D +RL
Sbjct: 186 FNRAKLLNVGFLEALKEDAAYDCFIFSDVDLVPMDDRNLYRCGDQPRHFAIAMDKFGFRL 245
Query: 155 PYASLFGGVSNI 166
PYAS FGGVS +
Sbjct: 246 PYASYFGGVSGL 257
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 31 VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKAN 80
+NGF NEYWGWGGEDDD+ NR+ G++I R I +Y M++H ++K N
Sbjct: 265 INGFPNEYWGWGGEDDDIFNRISLTGMKISRPDVRIGRYRMIKHDRDKHN 314
>sp|Q80WN9|B4GT2_CRIGR Beta-1,4-galactosyltransferase 2 OS=Cricetulus griseus GN=B4GALT2
PE=2 SV=1
Length = 369
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 96 FNRASLFNVGYAEAIKI-REFDCFIFHDVDLIPEDDRNLYTCPGMPRHMSVAVDSMNYRL 154
FNRA L NVG+ EA+K +DCFIF DVDL+P DDRNLY C PRH ++A+D +RL
Sbjct: 186 FNRAKLLNVGFLEALKEDATYDCFIFSDVDLVPMDDRNLYRCGDQPRHFAIAMDKFGFRL 245
Query: 155 PYASLFGGVSNI 166
PYAS FGGVS +
Sbjct: 246 PYASYFGGVSGL 257
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 31 VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKAN 80
+NGF NEYWGWGGEDDD+ NR+ G++I R I +Y M++H ++K N
Sbjct: 265 INGFPNEYWGWGGEDDDIFNRISLTGMKISRPDVRIGRYRMIKHDRDKHN 314
>sp|Q9UBX8|B4GT6_HUMAN Beta-1,4-galactosyltransferase 6 OS=Homo sapiens GN=B4GALT6 PE=1
SV=1
Length = 382
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 57/90 (63%)
Query: 77 EKANPQSSFFPHSISEGHPFNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTC 136
+K + +F+ + PFNRA LFNVG+ EA+K +DC IFHDVD +PE+DRN Y C
Sbjct: 183 QKQRLEFAFYVIEQTGTQPFNRAMLFNVGFKEAMKDSVWDCVIFHDVDHLPENDRNYYGC 242
Query: 137 PGMPRHMSVAVDSMNYRLPYASLFGGVSNI 166
MPRH + +D Y LPY FGGVS +
Sbjct: 243 GEMPRHFAAKLDKYMYILPYKEFFGGVSGL 272
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%)
Query: 31 VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRH 74
+NGF N +WGWGGEDDD+ NRV AG + R D+ KY + H
Sbjct: 280 INGFPNAFWGWGGEDDDLWNRVHYAGYNVTRPEGDLGKYKSIPH 323
>sp|O60909|B4GT2_HUMAN Beta-1,4-galactosyltransferase 2 OS=Homo sapiens GN=B4GALT2 PE=1
SV=1
Length = 372
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 96 FNRASLFNVGYAEAIKI-REFDCFIFHDVDLIPEDDRNLYTCPGMPRHMSVAVDSMNYRL 154
FNRA L NVG+ EA+K +DCFIF DVDL+P DDRNLY C PRH ++A+D +RL
Sbjct: 189 FNRAKLLNVGFLEALKEDAAYDCFIFSDVDLVPMDDRNLYRCGDQPRHFAIAMDKFGFRL 248
Query: 155 PYASLFGGVSNI 166
PYA FGGVS +
Sbjct: 249 PYAGYFGGVSGL 260
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 31 VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKAN 80
+NGF NEYWGWGGEDDD+ NR+ G++I R I +Y M++H ++K N
Sbjct: 268 INGFPNEYWGWGGEDDDIFNRISLTGMKISRPDIRIGRYRMIKHDRDKHN 317
>sp|P15535|B4GT1_MOUSE Beta-1,4-galactosyltransferase 1 OS=Mus musculus GN=B4galt1 PE=2
SV=1
Length = 399
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 51/71 (71%)
Query: 96 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTCPGMPRHMSVAVDSMNYRLP 155
FNRA L N+G+ EA+K +++CF+F DVDLIP DDRN Y C PRH+SVA+D + LP
Sbjct: 223 FNRAKLLNIGFQEALKDYDYNCFVFSDVDLIPMDDRNAYRCFSQPRHISVAMDKFGFSLP 282
Query: 156 YASLFGGVSNI 166
Y FGGVS +
Sbjct: 283 YVQYFGGVSAL 293
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 31 VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKAN 80
+NGF N YWGWGGEDDD+ NR+ G+ I R + + M+RH ++K N
Sbjct: 301 INGFPNNYWGWGGEDDDIFNRLVHKGMSISRPNAVVGRCRMIRHSRDKKN 350
>sp|P08037|B4GT1_BOVIN Beta-1,4-galactosyltransferase 1 OS=Bos taurus GN=B4GALT1 PE=1 SV=3
Length = 402
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 96 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTCPGMPRHMSVAVDSMNYRLP 155
FNRA L NVG+ EA+K +++CF+F DVDLIP +D N Y C PRH+SVA+D + LP
Sbjct: 226 FNRAKLLNVGFKEALKDYDYNCFVFSDVDLIPMNDHNTYRCFSQPRHISVAMDKFGFSLP 285
Query: 156 YASLFGGVSNI 166
Y FGGVS +
Sbjct: 286 YVQYFGGVSAL 296
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 31 VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKAN 80
+NGF N YWGWGGEDDD+ NR+ G+ + R I K M+RH ++K N
Sbjct: 304 INGFPNNYWGWGGEDDDIYNRLAFRGMSVSRPNAVIGKCRMIRHSRDKKN 353
>sp|Q5EA87|B4GT3_BOVIN Beta-1,4-galactosyltransferase 3 OS=Bos taurus GN=B4GALT3 PE=2 SV=2
Length = 396
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 96 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTC-PGMPRHMSVAVDSMNYRL 154
FNRA L NVG EA++ E+DC HDVDL+PE+D NLY C P PRH++VA++ Y L
Sbjct: 172 FNRAKLLNVGVREALRDEEWDCLFLHDVDLLPENDHNLYVCDPRGPRHVAVAMNKFGYSL 231
Query: 155 PYASLFGGVSNI 166
PY FGGVS +
Sbjct: 232 PYPQYFGGVSAL 243
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 38/50 (76%)
Query: 31 VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKAN 80
+NGF NEYWGWGGEDDD++ RV+ AG++I R P + Y M++HR +K N
Sbjct: 251 MNGFPNEYWGWGGEDDDIATRVRLAGMKISRPPTSVGHYKMVKHRGDKGN 300
>sp|O60512|B4GT3_HUMAN Beta-1,4-galactosyltransferase 3 OS=Homo sapiens GN=B4GALT3 PE=1
SV=2
Length = 393
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 96 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTC-PGMPRHMSVAVDSMNYRL 154
FNRA L NVG EA++ E+DC HDVDL+PE+D NLY C P PRH++VA++ Y L
Sbjct: 169 FNRAKLLNVGVREALRDEEWDCLFLHDVDLLPENDHNLYVCDPRGPRHVAVAMNKFGYSL 228
Query: 155 PYASLFGGVSNI 166
PY FGGVS +
Sbjct: 229 PYPQYFGGVSAL 240
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 38/50 (76%)
Query: 31 VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKAN 80
+NGF NEYWGWGGEDDD++ RV+ AG++I R P + Y M++HR +K N
Sbjct: 248 MNGFPNEYWGWGGEDDDIATRVRLAGMKISRPPTSVGHYKMVKHRGDKGN 297
>sp|Q80WN8|B4GT3_CRIGR Beta-1,4-galactosyltransferase 3 OS=Cricetulus griseus GN=B4GALT3
PE=2 SV=1
Length = 395
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 96 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTC-PGMPRHMSVAVDSMNYRL 154
FNRA L NVG EA++ E+DC HDVDL+PE+D NLY C P PRH++VA++ Y L
Sbjct: 171 FNRAKLLNVGVREALRDEEWDCLFLHDVDLLPENDHNLYVCDPRGPRHVAVAMNKFGYSL 230
Query: 155 PYASLFGGVSNI 166
PY FGGVS +
Sbjct: 231 PYPQYFGGVSAL 242
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 38/50 (76%)
Query: 31 VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKAN 80
+NGF NEYWGWGGEDDD++ RV+ AG++I R P + Y M++HR +K N
Sbjct: 250 MNGFPNEYWGWGGEDDDIATRVRLAGMKISRPPTSVGHYKMVKHRGDKGN 299
>sp|Q6P768|B4GT3_RAT Beta-1,4-galactosyltransferase 3 OS=Rattus norvegicus GN=B4galt3
PE=2 SV=1
Length = 395
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 96 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTC-PGMPRHMSVAVDSMNYRL 154
FNRA L NVG EA++ E+DC HDVDL+PE+D NLY C P PRH++VA++ Y L
Sbjct: 171 FNRAKLLNVGVREALRDEEWDCLFLHDVDLLPENDHNLYVCDPRGPRHVAVAMNKFGYSL 230
Query: 155 PYASLFGGVSNI 166
PY FGGVS +
Sbjct: 231 PYPQYFGGVSAL 242
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 38/50 (76%)
Query: 31 VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKAN 80
+NGF NEYWGWGGEDDD++ RV+ AG++I R P + Y M++HR +K N
Sbjct: 250 MNGFPNEYWGWGGEDDDIATRVRLAGMKISRPPTSVGHYKMVKHRGDKGN 299
>sp|Q5NVN3|B4GT3_PONAB Beta-1,4-galactosyltransferase 3 OS=Pongo abelii GN=B4GALT3 PE=2
SV=1
Length = 393
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 96 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTC-PGMPRHMSVAVDSMNYRL 154
FNRA L NVG EA++ E+DC HDVDL+PE+D NLY C P PRH++VA++ Y L
Sbjct: 169 FNRAKLLNVGVREALRDEEWDCLFLHDVDLLPENDHNLYVCDPRGPRHVAVAMNKFGYSL 228
Query: 155 PYASLFGGVSNI 166
PY FGGVS +
Sbjct: 229 PYPQYFGGVSAL 240
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 38/50 (76%)
Query: 31 VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKAN 80
+NGF NEYWGWGGEDDD++ RV+ AG++I R P + Y M++HR +K N
Sbjct: 248 MNGFPNEYWGWGGEDDDIATRVRLAGMKISRPPTSVGHYKMVKHRGDKGN 297
>sp|Q91YY2|B4GT3_MOUSE Beta-1,4-galactosyltransferase 3 OS=Mus musculus GN=B4galt3 PE=1
SV=1
Length = 395
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 96 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTC-PGMPRHMSVAVDSMNYRL 154
FNRA L NVG EA++ E+DC HDVDL+PE+D NLY C P PRH++VA++ Y L
Sbjct: 171 FNRAKLLNVGVREALRDEEWDCLFLHDVDLLPENDHNLYVCDPRGPRHVAVAMNKFGYSL 230
Query: 155 PYASLFGGVSNI 166
PY FGGVS +
Sbjct: 231 PYPQYFGGVSAL 242
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 38/50 (76%)
Query: 31 VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKAN 80
+NGF NEYWGWGGEDDD++ RV+ AG++I R P + Y M++HR +K N
Sbjct: 250 MNGFPNEYWGWGGEDDDIATRVRLAGMKISRPPTSVGHYKMVKHRGDKGN 299
>sp|P15291|B4GT1_HUMAN Beta-1,4-galactosyltransferase 1 OS=Homo sapiens GN=B4GALT1 PE=1
SV=5
Length = 398
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 49/71 (69%)
Query: 96 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTCPGMPRHMSVAVDSMNYRLP 155
FNRA L NVG+ EA+K ++ CF+F DVDLIP +D N Y C PRH+SVA+D + LP
Sbjct: 222 FNRAKLLNVGFQEALKDYDYTCFVFSDVDLIPMNDHNAYRCFSQPRHISVAMDKFGFSLP 281
Query: 156 YASLFGGVSNI 166
Y FGGVS +
Sbjct: 282 YVQYFGGVSAL 292
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 31 VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKAN 80
+NGF N YWGWGGEDDD+ NR+ G+ I R + + M+RH ++K N
Sbjct: 300 INGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGRCRMIRHSRDKKN 349
>sp|Q09323|BAGT_LYMST Beta-N-acetyl-D-glucosaminide
beta-1,4-N-acetylglucosaminyl-transferase OS=Lymnaea
stagnalis GN=GNT PE=2 SV=1
Length = 490
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 96 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTCPGM-PRHMSVAVDSMNYRL 154
FN+ LFN GY EA+K+ +DCFI HDVD+IP DDRN+Y C M P H S V+ Y+L
Sbjct: 234 FNKGILFNAGYLEALKVDNYDCFILHDVDMIPIDDRNMYRCNKMGPVHFSPGVNKFKYKL 293
Query: 155 PYASLFGGV 163
Y+ LFGGV
Sbjct: 294 FYSGLFGGV 302
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 29 QLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKE--KANPQS 83
+L+NG SN Y+GWGGEDDD+ NR L ++R Y M+ H + NP S
Sbjct: 311 RLINGASNLYFGWGGEDDDLRNRAVHMKLPLLRKTLAHGLYDMVSHVEAGWNVNPHS 367
>sp|Q8R087|B4GT7_MOUSE Beta-1,4-galactosyltransferase 7 OS=Mus musculus GN=B4galt7 PE=2
SV=1
Length = 327
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 29/51 (56%)
Query: 29 QLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKA 79
QL NG SN +WGWG EDD+ R+K AGLQ+ R Y RH + A
Sbjct: 212 QLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRPSGITTGYQTFRHLHDPA 262
Score = 34.3 bits (77), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 96 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTCP-GMPRHMSVAVDSMNYRL 154
FNRA+L NVG+ E+ D HDVDL+P ++ Y P P H VA ++
Sbjct: 139 FNRAALINVGFLESSN--STDYIAMHDVDLLPLNEELDYGFPEAGPFH--VASPELHPLY 194
Query: 155 PYASLFGGV 163
Y + GG+
Sbjct: 195 HYKTYVGGI 203
>sp|Q9UBV7|B4GT7_HUMAN Beta-1,4-galactosyltransferase 7 OS=Homo sapiens GN=B4GALT7 PE=1
SV=1
Length = 327
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%)
Query: 29 QLVNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYPPDIAKYSMLRHRKEKA 79
+L NG SN +WGWG EDD+ R+K AGLQ+ R Y RH + A
Sbjct: 212 RLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRPSGITTGYKTFRHLHDPA 262
Score = 33.9 bits (76), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 96 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTCP-GMPRHMSVAVDSMNYRL 154
FNRA+L NVG+ E+ D HDVDL+P ++ Y P P H VA ++
Sbjct: 139 FNRAALINVGFLESSN--STDYIAMHDVDLLPLNEELDYGFPEAGPFH--VASPELHPLY 194
Query: 155 PYASLFGGV 163
Y + GG+
Sbjct: 195 HYKTYVGGI 203
>sp|P34548|SQV3_CAEEL Probable galactosyltransferase sqv-3 OS=Caenorhabditis elegans
GN=sqv-3 PE=1 SV=1
Length = 289
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 31 VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIR 61
+NG SN+YWGWG EDD+ R+ + L + R
Sbjct: 174 LNGMSNKYWGWGLEDDEFYLRIIDSKLNLTR 204
Score = 38.1 bits (87), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 96 FNRASLFNVGYAEAIKIREFDCFIFHDVDLIPEDDRNLYTCPGMPRHMSVAVDSMNYRLP 155
FNRASL NVG+ EA ++ D + +DVDL+P + Y PG+ + + +
Sbjct: 97 FNRASLINVGWNEADRL-GCDYMVMNDVDLLPVNPEVPYDFPGIGVIRHITSPQYHPKYH 155
Query: 156 YASLFGGV 163
Y GG+
Sbjct: 156 YEKFIGGI 163
>sp|Q6ZQ11|CHSS1_MOUSE Chondroitin sulfate synthase 1 OS=Mus musculus GN=Chsy1 PE=2 SV=2
Length = 800
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 31 VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIR 61
V GF GWG ED D+ N+V AGL+ R
Sbjct: 705 VGGFDVSIQGWGLEDVDLFNKVVQAGLKTFR 735
>sp|Q86X52|CHSS1_HUMAN Chondroitin sulfate synthase 1 OS=Homo sapiens GN=CHSY1 PE=1 SV=3
Length = 802
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 31 VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIR 61
V GF GWG ED D+ N+V AGL+ R
Sbjct: 706 VGGFDVSIQGWGLEDVDLFNKVVQAGLKTFR 736
>sp|P22824|SCRK_VIBAL Fructokinase OS=Vibrio alginolyticus GN=scrK PE=3 SV=1
Length = 307
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Query: 123 VDLIPEDDRNLYTCP-GMPRHMSVAVDSMNYRLPYASLFGGVSN 165
VDLIPE + +L CP G P +++VA+ ++ + ++ FG V +
Sbjct: 12 VDLIPESETSLLKCPGGAPANVAVAIARLSGK---SAFFGRVGD 52
>sp|Q2JHK3|NU1C_SYNJB NAD(P)H-quinone oxidoreductase subunit 1 OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=ndhA PE=3 SV=2
Length = 373
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 4 RQQIDYTIFIIEQEVEVPTVPWD----KDQLVNGFSNEYWG 40
RQ I + IF+I E +P+D +++LV G+ EY G
Sbjct: 212 RQPIGFVIFLISALAETERIPFDLPEAEEELVAGYQTEYSG 252
>sp|Q9I2Q2|METH_PSEAE Methionine synthase OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=metH PE=3 SV=1
Length = 1234
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Query: 108 EAIKIREFDCFIFHDVDLIPED---DRNLYT-CPGMPRHMSVAVDSMNY------RLPYA 157
E I R +D + +V PED D N++ G+ H + AVD +N LPYA
Sbjct: 505 EEICKRSYDILV-DEVGFPPEDIIFDANIFAIATGIEEHNNYAVDFINACAYIRDNLPYA 563
Query: 158 SLFGGVSNI 166
GGVSN+
Sbjct: 564 LSSGGVSNV 572
>sp|P31495|URE2_YEREN Urease subunit beta OS=Yersinia enterocolitica GN=ureB PE=1 SV=4
Length = 164
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 17 EVEVPTVPWDKDQLVNGFSNEYWGWGGE 44
E EVP +P+ Q + GF+N GW GE
Sbjct: 110 ETEVPLIPFGGKQTLYGFNNLVDGWTGE 137
>sp|P69991|URE2_YERPS Urease subunit beta OS=Yersinia pseudotuberculosis serotype I
(strain IP32953) GN=ureB PE=3 SV=1
Length = 144
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 17 EVEVPTVPWDKDQLVNGFSNEYWGWGGE 44
E EVP +P+ Q + GF+N GW GE
Sbjct: 90 ETEVPLIPFGGKQTLYGFNNLVDGWTGE 117
>sp|P69990|URE2_YERPE Urease subunit beta OS=Yersinia pestis GN=ureB PE=3 SV=1
Length = 144
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 17 EVEVPTVPWDKDQLVNGFSNEYWGWGGE 44
E EVP +P+ Q + GF+N GW GE
Sbjct: 90 ETEVPLIPFGGKQTLYGFNNLVDGWTGE 117
>sp|A7FFN1|URE2_YERP3 Urease subunit beta OS=Yersinia pseudotuberculosis serotype O:1b
(strain IP 31758) GN=ureB PE=3 SV=1
Length = 144
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 17 EVEVPTVPWDKDQLVNGFSNEYWGWGGE 44
E EVP +P+ Q + GF+N GW GE
Sbjct: 90 ETEVPLIPFGGKQTLYGFNNLVDGWTGE 117
>sp|A1JKD8|URE2_YERE8 Urease subunit beta OS=Yersinia enterocolitica serotype O:8 /
biotype 1B (strain 8081) GN=ureB PE=3 SV=1
Length = 164
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 17 EVEVPTVPWDKDQLVNGFSNEYWGWGGE 44
E EVP +P+ Q + GF+N GW GE
Sbjct: 110 ETEVPLIPFGGKQTLYGFNNLVDGWTGE 137
>sp|Q62682|CNTN3_RAT Contactin-3 OS=Rattus norvegicus GN=Cntn3 PE=1 SV=1
Length = 1028
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 15 EQEVEVPTVPW-DKDQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQ---IIR-YPPDIAKY 69
E EV T+PW + + G+ YW GGE++ S++VK AG Q ++R ++A Y
Sbjct: 818 EIEVSWNTIPWKSSNGRLLGYEVRYWNNGGEEES-SSKVKVAGNQTSAVLRGLKSNLAYY 876
Query: 70 SMLR 73
+ +R
Sbjct: 877 TAVR 880
>sp|Q2JWB3|NU1C_SYNJA NAD(P)H-quinone oxidoreductase subunit 1 OS=Synechococcus sp.
(strain JA-3-3Ab) GN=ndhA PE=3 SV=1
Length = 373
Score = 30.8 bits (68), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 4 RQQIDYTIFIIEQEVEVPTVPWD----KDQLVNGFSNEYWG 40
RQ I + IF+I E +P+D +++LV G+ EY G
Sbjct: 212 RQPIGFVIFLISALAETERIPFDLPEAEEELVAGYQTEYSG 252
>sp|Q8C1F4|CGAT2_MOUSE Chondroitin sulfate N-acetylgalactosaminyltransferase 2 OS=Mus
musculus GN=Csgalnact2 PE=2 SV=1
Length = 542
Score = 30.4 bits (67), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 22 TVPWDKDQL-VNGFSNEYWGWGGEDDDMSNRVKAAGLQIIRYP 63
T + D L V GF E GWGGED + + L +IR P
Sbjct: 435 TCQYQSDFLSVGGFDMEVKGWGGEDVHLYRKYLHGDLIVIRTP 477
>sp|Q07409|CNTN3_MOUSE Contactin-3 OS=Mus musculus GN=Cntn3 PE=2 SV=2
Length = 1028
Score = 30.0 bits (66), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 15 EQEVEVPTVPWD-KDQLVNGFSNEYWGWGGEDDDMSNRVKAAGLQ---IIR-YPPDIAKY 69
E EV T+PW + + G+ YW GGE++ S +VK AG Q ++R ++A Y
Sbjct: 818 EIEVSWNTIPWKLSNGHLLGYEVRYWNNGGEEES-SRKVKVAGNQTSAVLRGLKSNLAYY 876
Query: 70 SMLR 73
+ +R
Sbjct: 877 TAVR 880
>sp|Q06GU1|NU1C_DRIGR NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Drimys
granadensis GN=ndhA PE=3 SV=1
Length = 363
Score = 30.0 bits (66), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 2 LVRQQIDYTIFIIEQEVEVPTVPWD----KDQLVNGFSNEYWG 40
L RQ I + +FII E +P+D +++LV G+ EY G
Sbjct: 208 LWRQPIGFIVFIISSLAECERLPFDLPEAEEELVAGYQTEYSG 250
>sp|A1XGT6|NU1C_RANMC NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic
OS=Ranunculus macranthus GN=ndhA PE=3 SV=1
Length = 363
Score = 29.6 bits (65), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 2 LVRQQIDYTIFIIEQEVEVPTVPWD----KDQLVNGFSNEYWG 40
L RQ I +T+F I E +P+D +++LV G+ EY G
Sbjct: 208 LWRQPIGFTVFFISSLAECERLPFDLPEAEEELVAGYQTEYSG 250
>sp|A1XG10|NU1C_NUPAD NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Nuphar
advena GN=ndhA PE=3 SV=2
Length = 361
Score = 29.6 bits (65), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 2 LVRQQIDYTIFIIEQEVEVPTVPWD----KDQLVNGFSNEYWG 40
L RQ I + +FII E +P+D +++LV G+ EY G
Sbjct: 206 LWRQPIGFIVFIISSLAECERLPFDLPEAEEELVAGYQTEYSG 248
>sp|Q6EVZ5|NU1C_NYMAL NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Nymphaea
alba GN=ndhA PE=3 SV=1
Length = 361
Score = 29.6 bits (65), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 2 LVRQQIDYTIFIIEQEVEVPTVPWD----KDQLVNGFSNEYWG 40
L RQ I + +FII E +P+D +++LV G+ EY G
Sbjct: 206 LWRQPIGFLVFIISSLAECERLPFDLPEAEEELVAGYQTEYSG 248
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.140 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,444,368
Number of Sequences: 539616
Number of extensions: 2635044
Number of successful extensions: 5541
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 5454
Number of HSP's gapped (non-prelim): 95
length of query: 167
length of database: 191,569,459
effective HSP length: 109
effective length of query: 58
effective length of database: 132,751,315
effective search space: 7699576270
effective search space used: 7699576270
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)