RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy698
(217 letters)
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 121 bits (306), Expect = 1e-33
Identities = 42/91 (46%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 124 TVWFELLCGEWPFKDQSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPSDRPDF 183
T+W+EL EWPFK Q E+II+Q+G GMKP+L+ + +++ D+L+ CW+++ +RP F
Sbjct: 231 TIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTF 290
Query: 184 ITLMKSLEKLPKKRILARSPSHPLNLSRSAE 214
LM LEKLPK+ R SHP + +SAE
Sbjct: 291 TKLMDMLEKLPKRN---RRLSHPGHFWKSAE 318
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 81.6 bits (202), Expect = 7e-19
Identities = 20/77 (25%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 124 TVWFELLCGEWPFKDQSP-ESIIFQVGKG-MKPSLANLQAS--QDVKDVLMKCWSYKPSD 179
V +EL+ G+ P+ + + + II VG+G + P L+ ++++ + +K ++ +C K +
Sbjct: 213 IVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDE 272
Query: 180 RPDFITLMKSLEKLPKK 196
RP F ++ +E+L ++
Sbjct: 273 RPSFPRILAEIEELARE 289
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 75.8 bits (187), Expect = 1e-16
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 124 TVWFELLCGEWPFKDQSP-ESIIFQVGKGMK-PSLANLQAS--QDVKDVLMKCWSYKPSD 179
V +EL+ GE P+ + + IIF VG+G P L+ L + + +K ++ C +
Sbjct: 225 IVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEE 284
Query: 180 RPDFITLMKSLEKLPKK 196
RP F ++ S+E L
Sbjct: 285 RPLFPQILSSIELLQHS 301
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 59.6 bits (145), Expect = 6e-11
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 126 WFELLCGEWPFKDQSPESIIFQVG-KGMKPSLANLQASQDVKDVLMKCWSYKPSDRPDFI 184
W EL+ E PF D S I +V +G++P++ S V ++ C + P+ RP F
Sbjct: 202 W-ELVTREVPFADLSNMEIGMKVALEGLRPTIPP-GISPHVSKLMKICMNEDPAKRPKFD 259
Query: 185 TLMKSLEKLPKK 196
++ LEK+ K
Sbjct: 260 MIVPILEKMQDK 271
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 58.8 bits (143), Expect = 9e-11
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 126 WFELLCGEWPFKDQSPESIIFQVG-KGMKPSLANLQASQDVKDVLMKCWSYKPSDRPDFI 184
W ELL GE PF+ ++ + V + + + + ++ CW+ P RP F
Sbjct: 205 W-ELLTGEVPFRGIDGLAVAYGVAMNKLALPIPS-TCPEPFAKLMEDCWNPDPHSRPSFT 262
Query: 185 TLMKSLEKL 193
++ L +
Sbjct: 263 NILDQLTTI 271
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 58.9 bits (143), Expect = 1e-10
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 126 WFELLCGEWPFKDQSPESIIFQVG-KGMKPSLANLQASQDVKDVLMKCWSYKPSDRPDFI 184
W EL + P+ + +P ++ VG K + + + V ++ CW+ +P RP F
Sbjct: 230 W-ELATLQQPWGNLNPAQVVAAVGFKCKRLEIPR-NLNPQVAAIIEGCWTNEPWKRPSFA 287
Query: 185 TLMKSLEKLPK 195
T+M L L K
Sbjct: 288 TIMDLLRPLIK 298
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 53.1 bits (128), Expect = 9e-09
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 126 WFELLCGEWPFKDQSPESIIFQVG---KGMKPSLANLQASQDVKDVLMKCWSYKPSDRPD 182
+ +L GE PF + S I F +G++P++ +++V+ CWS P RP
Sbjct: 219 Y-TILTGEGPFDEYSYGKIKFINMIREEGLRPTIPE-DCPPRLRNVIELCWSGDPKKRPH 276
Query: 183 FITLMKSLEKL 193
F ++K L +L
Sbjct: 277 FSYIVKELSEL 287
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 53.1 bits (128), Expect = 1e-08
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 126 WFELLCGEWPFKD--QSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPSDRPDF 183
W E++ PF + I++ V G +P L + ++ ++ +CWS PS RP
Sbjct: 194 W-EVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIK-NLPKPIESLMTRCWSKDPSQRPSM 251
Query: 184 ITLMKSLEKLPKK 196
++K + L +
Sbjct: 252 EEIVKIMTHLMRY 264
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 51.5 bits (124), Expect = 4e-08
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 15/91 (16%)
Query: 124 TVWFELL-CGEWPFKDQSPESIIFQVGKG--M-KPSLANLQASQDVKDVLMKCWSYKPSD 179
TVW EL+ G P+ I + KG + +P + + DV ++ KCW
Sbjct: 208 TVW-ELMTFGSKPYDGIPASEISSILEKGERLPQPPIC----TIDVYMIMRKCWMIDADS 262
Query: 180 RPDFITLMKSLEKLPKKRILARSPSHPLNLS 210
RP F L+ K +AR P L +
Sbjct: 263 RPKFRELIIEFSK------MARDPQRYLVIQ 287
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive
kinase, HER3, ATP-binding, cell membrane, membrane,
nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB:
3lmg_A*
Length = 325
Score = 48.9 bits (117), Expect = 3e-07
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 15/96 (15%)
Query: 124 TVWFELL-CGEWPFKDQSPESIIFQVGKG--M-KPSLANLQASQDVKDVLMKCWSYKPSD 179
TVW EL+ G P+ + + KG + +P + + DV V++KCW +
Sbjct: 206 TVW-ELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQIC----TIDVYMVMVKCWMIDENI 260
Query: 180 RPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAES 215
RP F L + +AR P L + R +
Sbjct: 261 RPTFKELANEFTR------MARDPPRYLVIKRESGP 290
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 48.5 bits (116), Expect = 4e-07
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 11/100 (11%)
Query: 124 TVWFELL-CGEWPFKDQSPESIIFQVGKGM---KPSLANLQASQDVKDVLMKCWSYKPSD 179
TVW EL+ G P+ I + KG +P + + DV +++KCW
Sbjct: 208 TVW-ELMTFGSKPYDGIPASEISSILEKGERLPQPPIC----TIDVYMIMVKCWMIDADS 262
Query: 180 RPDFITLMKSLEKLPK--KRILARSPSHPLNLSRSAESVF 217
RP F L+ K+ + +R L ++L +S F
Sbjct: 263 RPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSNF 302
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor,
receptor tyrosine kinase, spirocyc kinase domain,
phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus
musculus}
Length = 323
Score = 45.0 bits (107), Expect = 6e-06
Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 9/89 (10%)
Query: 132 GEWPFKDQSPESIIFQVGKGM---KPSLANLQASQDVKDVLMKCWSYKPSDRPDFITLMK 188
G+ P+ I + G +P + ++V D++ +CWS P RP F L
Sbjct: 236 GQTPYAGIENAEIYNYLIGGNRLKQPP----ECMEEVYDLMYQCWSADPKQRPSFTCLRM 291
Query: 189 SLEKLPKKRILARSPSHP--LNLSRSAES 215
LE + + + P +N+ R+
Sbjct: 292 ELENILGHLSVLSTSQDPLYINIERAHHH 320
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 44.6 bits (106), Expect = 7e-06
Identities = 18/98 (18%), Positives = 29/98 (29%), Gaps = 11/98 (11%)
Query: 128 ELLCGEWPFKDQSPESIIFQVG--KGMKPSLANLQASQDVKDVLMKCWSYKPSDRPDFIT 185
E++ D P ++ F + + + ++C P RP F+
Sbjct: 214 EIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPP-NCPPSFFPITVRCCDLDPEKRPSFVK 272
Query: 186 LMKSLEKL--------PKKRILARSPSHPLNLSRSAES 215
L LE L P L + R ES
Sbjct: 273 LEHWLETLRMHLAGHLPLGPQLEQLDRGFWETYRRGES 310
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 44.6 bits (106), Expect = 9e-06
Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Query: 124 TVWFELL-CGEWPFKDQSPESIIFQVGKG--M-KPSLANLQASQDVKDVLMKCWSYKPSD 179
+W E G+ P++ + + KG M P+ +++ D++ CW+Y +
Sbjct: 209 LMW-EAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA----GCPREMYDLMNLCWTYDVEN 263
Query: 180 RPDFITLMKSLEKL 193
RP F + L
Sbjct: 264 RPGFAAVELRLRNY 277
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 43.7 bits (104), Expect = 2e-05
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 124 TVWFELL-CGEWPFKDQSPESIIFQVGKG--M-KPSLANLQASQDVKDVLMKCWSYKPSD 179
+W E+L G+ PF + +I + KG + KP L + ++ +CW Y PSD
Sbjct: 203 CMW-EILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLC----PPVLYTLMTRCWDYDPSD 257
Query: 180 RPDFITLMKSLEKL 193
RP F L+ SL +
Sbjct: 258 RPRFTELVCSLSDV 271
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 44.0 bits (104), Expect = 2e-05
Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 7/72 (9%)
Query: 125 VWFELLCGEWPFKDQSPESIIFQVGKG--M-KPSLANLQASQDVKDVLMKCWSYKPSDRP 181
+ G P+ ++ QV +G M P + + D++ +CW +P +RP
Sbjct: 371 LTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC----PESLHDLMCQCWRKEPEERP 426
Query: 182 DFITLMKSLEKL 193
F L LE
Sbjct: 427 TFEYLQAFLEDY 438
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 44.2 bits (104), Expect = 2e-05
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 124 TVWFELL-CGEWPFKDQSPESIIFQVGKG--M-KPSLANLQASQDVKDVLMKCWSYKPSD 179
T+W E L G+ P+K ++ + +G M P + ++ ++ CW YK D
Sbjct: 528 TMW-EALSYGQKPYKKMKGPEVMAFIEQGKRMECPP----ECPPELYALMSDCWIYKWED 582
Query: 180 RPDFITLMKSLEKL 193
RPDF+T+ + +
Sbjct: 583 RPDFLTVEQRMRAC 596
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 43.5 bits (103), Expect = 2e-05
Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Query: 162 SQDVKDVLMKCWSYKPSDRPDFITLMKSLEKL---PKKRILARSPSHPLNLSRS 212
+V +++ CW+ P DRP F L L+ L + +HP S
Sbjct: 270 PAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCETHAFTAHPEGKHHS 323
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 43.8 bits (104), Expect = 2e-05
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 132 GEWPFKDQSPESIIFQVGKG--M-KPSLANLQASQDVKDVLMKCWSYKPSDRPDFITLMK 188
G P+ + S + V KG + P L V ++ +CW+Y+P RP F T+ +
Sbjct: 312 GASPYPNLSNQQTREFVEKGGRLPCPELC----PDAVFRLMEQCWAYEPGQRPSFSTIYQ 367
Query: 189 SLEKLPKK 196
L+ + K+
Sbjct: 368 ELQSIRKR 375
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase,
quinoxaline, alternative splicing, ATP-binding,
chromosomal rearrangement; HET: IHX; 1.40A {Homo
sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A*
2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A*
2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A*
3ctj_A* ...
Length = 298
Score = 43.4 bits (103), Expect = 2e-05
Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 14/79 (17%)
Query: 125 VW-FELLC------GEWPFKDQSPESIIFQVGKGM---KPSLANLQASQDVKDVLMKCWS 174
VW F +L G P+ D + I + +G +P + +V++KCW
Sbjct: 215 VWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE----YCPDPLYEVMLKCWH 270
Query: 175 YKPSDRPDFITLMKSLEKL 193
K RP F L+ + +
Sbjct: 271 PKAEMRPSFSELVSRISAI 289
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 43.4 bits (103), Expect = 2e-05
Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 132 GEWPFKDQSPESIIFQVGKG--M-KPSLANLQASQDVKDVLMKCWSYKPSDRPDFITLMK 188
G P+ + + K M +P + V +++ CW + PSDRP F + +
Sbjct: 209 GMSPYPGIDLSQVYELLEKDYRMERPEGC----PEKVYELMRACWQWNPSDRPSFAEIHQ 264
Query: 189 SLEKL 193
+ E +
Sbjct: 265 AFETM 269
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 43.5 bits (102), Expect = 2e-05
Identities = 9/56 (16%), Positives = 17/56 (30%), Gaps = 6/56 (10%)
Query: 127 FELLCGEWPFKDQSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPSDRPD 182
+ + C + P D + + + Q V+ +L Y DR
Sbjct: 308 YWIWCADLPNTDDAALGGSEWIFRS------CKNIPQPVRALLEGFLRYPKEDRLL 357
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 43.1 bits (102), Expect = 2e-05
Identities = 14/62 (22%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 128 ELLCGEWPFKDQSPESIIFQ-VGKGMKPSLANLQASQDVKDVLMKCWSYKPSDRPDFITL 186
E+ E+P+ + + I++ V G+KP+ + A +VK+++ C +R L
Sbjct: 221 EMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDL 280
Query: 187 MK 188
+
Sbjct: 281 LN 282
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 43.0 bits (102), Expect = 2e-05
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 132 GEWPFKDQSPESIIFQVGKG--M-KPSLANLQASQDVKDVLMKCWSYKPSDRPDFITLMK 188
G P+ + ++ +V KG M P V +V+ CW + RP F+ L +
Sbjct: 211 GRVPYPRIPLKDVVPRVEKGYKMDAPDGC----PPAVYEVMKNCWHLDAAMRPSFLQLRE 266
Query: 189 SLEKL 193
LE +
Sbjct: 267 QLEHI 271
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 43.0 bits (102), Expect = 3e-05
Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 132 GEWPFKDQSPESIIFQVGKG--M-KPSLANLQASQDVKDVLMKCWSYKPSDRPDFITLMK 188
G P+ + +I + +G M +P +++ ++ CW +P DRP F L
Sbjct: 207 GRIPYPGMTNPEVIQNLERGYRMVRPDNC----PEELYQLMRLCWKERPEDRPTFDYLRS 262
Query: 189 SLEKL 193
LE
Sbjct: 263 VLEDF 267
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 42.6 bits (101), Expect = 3e-05
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 124 TVWFELL-CGEWPFKDQSPESIIFQVGKG---M-KPSLANLQASQDVKDVLMKCWSYKPS 178
T+W E+ G+ P+ + I+ ++ K + +P QD+ +V+++CW++KP
Sbjct: 213 TLW-EMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC----PQDIYNVMVQCWAHKPE 267
Query: 179 DRPDFITLMKSLEKL 193
DRP F+ L L +
Sbjct: 268 DRPTFVALRDFLLEA 282
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 42.7 bits (101), Expect = 3e-05
Identities = 13/84 (15%), Positives = 32/84 (38%), Gaps = 5/84 (5%)
Query: 127 FELLCGEWPF--KDQSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPSDRPDFI 184
+E+ + PF + S+ ++ + P L + S++++ ++ C + P RPD
Sbjct: 227 YEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVT 286
Query: 185 TLMKS---LEKLPKKRILARSPSH 205
+ + + H
Sbjct: 287 YVYDVAKRMHACTASSLEHHHHHH 310
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS
autophosphorylation conformation, recept tyrosine
kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo
sapiens}
Length = 298
Score = 42.6 bits (101), Expect = 3e-05
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 14/79 (17%)
Query: 125 VW-FELLC------GEWPFKDQSPESIIFQVGKGM---KPSLANLQASQDVKDVLMKCWS 174
VW F +L G P++ P + + +G +P + V+ +CW
Sbjct: 211 VWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPE----YCPDSLYQVMQQCWE 266
Query: 175 YKPSDRPDFITLMKSLEKL 193
P+ RP F L+ +E++
Sbjct: 267 ADPAVRPTFRVLVGEVEQI 285
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 42.6 bits (101), Expect = 3e-05
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 7/65 (10%)
Query: 132 GEWPFKDQSPESIIFQVGKG--M-KPSLANLQASQDVKDVLMKCWSYKPSDRPDFITLMK 188
G PF+ +I ++ G + P + ++ KCW+Y PS RP F L
Sbjct: 214 GVKPFQGVKNNDVIGRIENGERLPMPP----NCPPTLYSLMTKCWAYDPSRRPRFTELKA 269
Query: 189 SLEKL 193
L +
Sbjct: 270 QLSTI 274
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 42.8 bits (101), Expect = 3e-05
Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 132 GEWPFKDQSPESIIFQVGKG--M-KPSLANLQASQDVKDVLMKCWSYKPSDRPDFITLMK 188
G P+ + + K M +P + V +++ CW + PSDRP F + +
Sbjct: 416 GMSPYPGIDLSQVYELLEKDYRMERPEGC----PEKVYELMRACWQWNPSDRPSFAEIHQ 471
Query: 189 SLEKL 193
+ E +
Sbjct: 472 AFETM 476
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 42.8 bits (101), Expect = 4e-05
Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 14/79 (17%)
Query: 125 VW------FELL-CGEWPFKDQSPESIIFQVGKG--M-KPSLANLQASQDVKDVLMKCWS 174
VW E++ G P+ S +I + +G M +P +++ +++M+CW
Sbjct: 368 VWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENC----PEELYNIMMRCWK 423
Query: 175 YKPSDRPDFITLMKSLEKL 193
+P +RP F + L+
Sbjct: 424 NRPEERPTFEYIQSVLDDF 442
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 42.9 bits (101), Expect = 4e-05
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Query: 124 TVWFELL-CGEWPFKDQSPESIIFQVGKGM---KPSLANLQASQDVKDVLMKCWSYKPSD 179
+W E+L G PF+ +I ++ G P + ++ KCW+Y PS
Sbjct: 581 CMW-EILMHGVKPFQGVKNNDVIGRIENGERLPMPP----NCPPTLYSLMTKCWAYDPSR 635
Query: 180 RPDFITLMKSLEKL 193
RP F L L +
Sbjct: 636 RPRFTELKAQLSTI 649
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 42.9 bits (101), Expect = 4e-05
Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 7/72 (9%)
Query: 125 VWFELLCGEWPFKDQSPESIIFQVGKG--M-KPSLANLQASQDVKDVLMKCWSYKPSDRP 181
+ G P+ ++ QV +G M P + + D++ +CW +P +RP
Sbjct: 454 LTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC----PESLHDLMCQCWRKEPEERP 509
Query: 182 DFITLMKSLEKL 193
F L LE
Sbjct: 510 TFEYLQAFLEDY 521
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 42.2 bits (100), Expect = 4e-05
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 124 TVWFELL-CGEWPFKDQSPESIIFQVGKG--M-KPSLANLQASQDVKDVLMKCWSYKPSD 179
T+W E L G+ P+K ++ + +G M P + ++ ++ CW YK D
Sbjct: 202 TMW-EALSYGQKPYKKMKGPEVMAFIEQGKRMECPP----ECPPELYALMSDCWIYKWED 256
Query: 180 RPDFITLMKSLEKL 193
RPDF+T+ + +
Sbjct: 257 RPDFLTVEQRMRAC 270
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP
binding, transferase-transfera inhibitor complex; HET:
046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A*
3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A*
3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A*
Length = 295
Score = 42.3 bits (100), Expect = 4e-05
Identities = 10/70 (14%), Positives = 25/70 (35%), Gaps = 7/70 (10%)
Query: 127 FELLCGEWPFKDQSPESIIFQVGKGM---KPSLANLQASQDVKDVLMKCWSYKPSDRPDF 183
F + G +I + +P ++ ++ +CW+ + RP F
Sbjct: 224 FMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSF 279
Query: 184 ITLMKSLEKL 193
L ++++
Sbjct: 280 RDLALRVDQI 289
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 42.4 bits (100), Expect = 4e-05
Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 7/65 (10%)
Query: 132 GEWPFKDQSPESIIFQVGKGM---KPSLANLQASQDVKDVLMKCWSYKPSDRPDFITLMK 188
G P+ D + I + +G +P + +V++KCW K RP F L+
Sbjct: 293 GAPPYPDVNTFDITVYLLQGRRLLQPE----YCPDPLYEVMLKCWHPKAEMRPSFSELVS 348
Query: 189 SLEKL 193
+ +
Sbjct: 349 RISAI 353
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 42.7 bits (101), Expect = 4e-05
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 132 GEWPFKDQSPESIIFQVGKG--M-KPSLANLQASQDVKDVLMKCWSYKPSDRPDFITLMK 188
G P+ + ++ +V KG M P V DV+ CW + RP F+ L +
Sbjct: 383 GRVPYPRIPLKDVVPRVEKGYKMDAPDGC----PPAVYDVMKNCWHLDAATRPTFLQLRE 438
Query: 189 SLEKL 193
LE +
Sbjct: 439 QLEHI 443
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase
inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB:
3sxr_A*
Length = 268
Score = 42.2 bits (100), Expect = 5e-05
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 132 GEWPFKDQSPESIIFQVGKG--M-KPSLANLQASQDVKDVLMKCWSYKPSDRPDFITLMK 188
G+ P+ + ++ +V +G + +P LA S + ++ CW P RP F L+
Sbjct: 202 GKMPYDLYTNSEVVLKVSQGHRLYRPHLA----SDTIYQIMYSCWHELPEKRPTFQQLLS 257
Query: 189 SLEKL 193
S+E L
Sbjct: 258 SIEPL 262
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain,
transferase-transferase inhibit complex; HET: PTR 0NT;
1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A*
3eyh_A*
Length = 302
Score = 42.3 bits (100), Expect = 5e-05
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 162 SQDVKDVLMKCWSYKPSDRPDFITLMKSLEKL 193
+V ++ KCW ++PS+R F L++ E L
Sbjct: 269 PDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 42.3 bits (99), Expect = 6e-05
Identities = 8/55 (14%), Positives = 16/55 (29%), Gaps = 6/55 (10%)
Query: 127 FELLCGEWPFKDQSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPSDRP 181
+ + C + P + + + Q V+ +L Y DR
Sbjct: 304 YWIWCADLPITKDAALGGSEWIFRS------CKNIPQPVRALLEGFLRYPKEDRL 352
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation,
cancer, PAN inhibitor, ATP-binding nucleotide-binding,
phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo
sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A*
Length = 318
Score = 41.9 bits (99), Expect = 6e-05
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 162 SQDVKDVLMKCWSYKPSDRPDFITLMKSLEKL 193
+V ++ CW + S RP F L+ L+ +
Sbjct: 277 PAEVYHLMKNCWETEASFRPTFENLIPILKTV 308
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding,
tyrosine-protein kinase, proto-oncogene, phosphoprotein,
disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo
sapiens}
Length = 326
Score = 42.0 bits (99), Expect = 7e-05
Identities = 10/70 (14%), Positives = 25/70 (35%), Gaps = 7/70 (10%)
Query: 127 FELLCGEWPFKDQSPESIIFQVGKGM---KPSLANLQASQDVKDVLMKCWSYKPSDRPDF 183
F + G +I + +P ++ ++ +CW+ + RP F
Sbjct: 255 FMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSF 310
Query: 184 ITLMKSLEKL 193
L ++++
Sbjct: 311 RDLALRVDQI 320
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 41.5 bits (98), Expect = 8e-05
Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 132 GEWPFKDQSPESIIFQVGKG--M-KPSLANLQASQDVKDVLMKCWSYKPSDRPDFITLMK 188
GE P+ + + +I V +G + P + +++ CW + RP F ++
Sbjct: 251 GERPYWNMTNRDVISSVEEGYRLPAPMGC----PHALHQLMLDCWHKDRAQRPRFSQIVS 306
Query: 189 SLEKL 193
L+ L
Sbjct: 307 VLDAL 311
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 41.5 bits (98), Expect = 9e-05
Identities = 14/68 (20%), Positives = 22/68 (32%), Gaps = 15/68 (22%)
Query: 132 GEWPFKDQSPESIIFQVGKG------MKPSLANLQASQDVKDVLMKCWSYKPSDRPDFIT 185
G+ P + + LANL + C Y+P RP F
Sbjct: 215 GDKPLSALDSQRKLQFYEDRHQLPAPKAAELANL---------INNCMDYEPDHRPSFRA 265
Query: 186 LMKSLEKL 193
+++ L L
Sbjct: 266 IIRDLNSL 273
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP
binding, phosphorylation, intracellular,
transferase-transferase inhibitor complex; HET: IAQ;
1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A*
3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A*
3mj1_A* 3mj2_A*
Length = 267
Score = 41.0 bits (97), Expect = 1e-04
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 132 GEWPFKDQSPESIIFQVGKG--M-KPSLANLQASQDVKDVLMKCWSYKPSDRPDFITLMK 188
G+ P++++S ++ + G + KP LA S V ++ CW +P DRP F L++
Sbjct: 202 GKIPYENRSNSEVVEDISTGFRLYKPRLA----STHVYQIMNHCWRERPEDRPAFSRLLR 257
Query: 189 SLEKL 193
L ++
Sbjct: 258 QLAEI 262
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 41.2 bits (97), Expect = 1e-04
Identities = 16/87 (18%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 127 FELLCGEWPFKDQSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPSDRPDFITL 186
+EL + F+ S ++++ ++ G P + +L S D++ ++ + + P DRP ++
Sbjct: 216 YELCTLKHAFEAGSMKNLVLKIISGSFPPV-SLHYSYDLRSLVSQLFKRNPRDRPSVNSI 274
Query: 187 MKS------LEKLPKKRILARSPSHPL 207
++ +EK +++A
Sbjct: 275 LEKGFIAKRIEKFLSPQLIAEEFCLKT 301
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease
mutation, glycoprotein, nucleot binding,
phosphorylation, receptor; HET: ADP; 1.90A {Homo
sapiens} PDB: 3bpr_A* 2p0c_A*
Length = 313
Score = 41.1 bits (97), Expect = 1e-04
Identities = 16/65 (24%), Positives = 25/65 (38%), Gaps = 7/65 (10%)
Query: 132 GEWPFKDQSPESIIFQVGKGM---KPSLANLQASQDVKDVLMKCWSYKPSDRPDFITLMK 188
G P+ + + G +P ++ +++ CW P DRP F L
Sbjct: 246 GMTPYPGVQNHEMYDYLLHGHRLKQPE----DCLDELYEIMYSCWRTDPLDRPTFSVLRL 301
Query: 189 SLEKL 193
LEKL
Sbjct: 302 QLEKL 306
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 41.3 bits (97), Expect = 1e-04
Identities = 10/77 (12%), Positives = 25/77 (32%), Gaps = 1/77 (1%)
Query: 128 ELLCGEWPFKDQSPESIIFQVGKGMKPSLANL-QASQDVKDVLMKCWSYKPSDRPDFITL 186
+L G P+ + ++ P + + + +P R + L
Sbjct: 248 HMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMEL 307
Query: 187 MKSLEKLPKKRILARSP 203
+ + K ++ +SP
Sbjct: 308 RRKVGKALQEVGGLKSP 324
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 40.8 bits (96), Expect = 1e-04
Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 132 GEWPFKDQSPESIIFQVGKG--M-KPSLANLQASQDVKDVLMKCWSYKPSDRPDFITLMK 188
GE P+ + S ++ + G + P + ++M+CW + + RP F ++
Sbjct: 247 GERPYWELSNHEVMKAINDGFRLPTPM----DCPSAIYQLMMQCWQQERARRPKFADIVS 302
Query: 189 SLEKL 193
L+KL
Sbjct: 303 ILDKL 307
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET;
nucleotide-binding, hirschsprung disease,
phosphorylation, disease mutation; HET: ACK; 2.00A {Homo
sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A*
2ivv_A*
Length = 314
Score = 40.7 bits (96), Expect = 1e-04
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 162 SQDVKDVLMKCWSYKPSDRPDFITLMKSLEKL 193
S+++ ++++CW +P RP F + K LEK+
Sbjct: 278 SEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; HET: PTR ACP; 1.80A
{Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A*
2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A*
3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A*
3js2_A* 3ky2_A ...
Length = 334
Score = 40.7 bits (96), Expect = 2e-04
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 13/87 (14%)
Query: 132 GEWPFKDQSPESIIFQVGKG--M-KPSLANLQASQDVKDVLMKCWSYKPSDRPDFITLMK 188
G P+ E + + +G M KP+ + ++ ++ CW PS RP F L++
Sbjct: 256 GGSPYPGIPVEELFKLLKEGHRMDKPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 189 SLEKLPKKRILARSPSHP-LNLSRSAE 214
L+ RIL + + L+LS+ E
Sbjct: 312 DLD-----RILTLTTNEEYLDLSQPLE 333
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment,
structural genomics, mutant, structural genomics
consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB:
2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A
2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A*
2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Length = 373
Score = 40.4 bits (95), Expect = 2e-04
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Query: 132 GEWPFKDQSPESIIFQVGKG--M-KPSLANLQASQDVKDVLMKCWSYKPSDRPDFITLMK 188
GE P+ + S + +I V +G + P + +++ CW ++RP F ++
Sbjct: 247 GERPYWEMSNQDVIKAVDEGYRLPPPM----DCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
Query: 189 SLEKL 193
L+KL
Sbjct: 303 ILDKL 307
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene
homolog; kinase, structure, inhibitor, STI-571, gleevec,
transferase activator; HET: STI; 1.60A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Length = 313
Score = 40.3 bits (95), Expect = 2e-04
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 161 ASQDVKDVLMKCWSYKPSDRPDFITLMKSLEKL 193
A ++ D++ CW P RP F +++ +EK
Sbjct: 273 APAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis,
nucleotide-binding, inhibitor, phosphorylation receptor,
transferase, transmembrane; HET: 00J; 1.50A {Homo
sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A*
3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A*
2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A*
3cpc_A* ...
Length = 316
Score = 40.3 bits (95), Expect = 2e-04
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 162 SQDVKDVLMKCWSYKPSDRPDFITLMKSLEKL 193
+ ++ ++ CW +PS RP F L++ L L
Sbjct: 277 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition,
juxtamembrane domain, transferase; 2.10A {Homo sapiens}
SCOP: d.144.1.7
Length = 344
Score = 40.4 bits (95), Expect = 2e-04
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 161 ASQDVKDVLMKCWSYKPSDRPDFITLMKSLEKL 193
A++++ ++ CW++ RP F L L
Sbjct: 300 ATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQ 332
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor;
HET: V4Z; 2.75A {Homo sapiens}
Length = 329
Score = 40.4 bits (95), Expect = 2e-04
Identities = 7/29 (24%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Query: 169 LMK-CWSYKPSDRPDFITLMKSLEKLPKK 196
+M+ CW +P R + L+ L +
Sbjct: 292 IMRGCWQREPQQRHSIKDVHARLQALAQA 320
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation,
signal transduction, MASS spectrometry, transferase;
2.05A {Rattus norvegicus} SCOP: d.144.1.7
Length = 343
Score = 40.4 bits (95), Expect = 2e-04
Identities = 9/35 (25%), Positives = 23/35 (65%)
Query: 162 SQDVKDVLMKCWSYKPSDRPDFITLMKSLEKLPKK 196
++ +++ CWS P+DRP F ++ + L+++ ++
Sbjct: 302 PLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase,
4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,
2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43;
1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A*
3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A*
1k2p_A
Length = 283
Score = 39.9 bits (94), Expect = 2e-04
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Query: 132 GEWPFKDQSPESIIFQVGKG--M-KPSLANLQASQDVKDVLMKCWSYKPSDRPDFITLMK 188
G+ P++ + + +G + +P LA S+ V ++ CW K +RP F L+
Sbjct: 218 GKMPYERFTNSETAEHIAQGLRLYRPHLA----SEKVYTIMYSCWHEKADERPTFKILLS 273
Query: 189 SLEKL 193
++ +
Sbjct: 274 NILDV 278
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A
{Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A*
2p4i_A* 3l8p_A* 2wqb_A*
Length = 327
Score = 40.0 bits (94), Expect = 2e-04
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 162 SQDVKDVLMKCWSYKPSDRPDFITLMKSLEKL 193
+V D++ +CW KP +RP F ++ SL ++
Sbjct: 267 DDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298
>3v5q_A NT-3 growth factor receptor; kinase domain, kinase,
phosphorylation, transferase-transfer inhibitor complex;
HET: 0F4; 2.20A {Homo sapiens}
Length = 297
Score = 39.9 bits (94), Expect = 3e-04
Identities = 8/26 (30%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 169 LMK-CWSYKPSDRPDFITLMKSLEKL 193
+M CW +P R + + K L L
Sbjct: 267 VMLGCWQREPQQRLNIKEIYKILHAL 292
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain,
transferase, transferase-transferase inhibito; HET: 07J;
2.80A {Homo sapiens}
Length = 382
Score = 40.0 bits (94), Expect = 3e-04
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 162 SQDVKDVLMKCWSYKPSDRPDFITLMKSLEKL 193
+ ++ ++ CW PS RP F L++ L+++
Sbjct: 319 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain,
kinase inhibitor complex, transferase; HET: 5CN; 1.80A
{Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A*
3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Length = 333
Score = 39.6 bits (93), Expect = 3e-04
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 161 ASQDVKDVLMKCWSYKPSDRPDFITLMKSLEKL 193
A +++ ++ CW+ +P+ RP F + L++
Sbjct: 292 APKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; 2.40A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1xr0_A
Length = 370
Score = 39.6 bits (93), Expect = 4e-04
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 162 SQDVKDVLMKCWSYKPSDRPDFITLMKSLEKL 193
+ ++ ++ CW PS RP F L++ L+++
Sbjct: 331 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 39.6 bits (93), Expect = 4e-04
Identities = 10/62 (16%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 127 FELLCGEWPFKDQSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPSDRPDFITL 186
+EL PF S + + ++ +G + + S ++ +++ + + K RP +
Sbjct: 207 YELCALMPPFTAFSQKELAGKIREGKFRRIPY-RYSDELNEIITRMLNLKDYHRPSVEEI 265
Query: 187 MK 188
++
Sbjct: 266 LE 267
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 39.6 bits (93), Expect = 4e-04
Identities = 9/26 (34%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 169 LMK-CWSYKPSDRPDFITLMKSLEKL 193
+M CW ++P DRP+F +++ +E
Sbjct: 277 IMTQCWQHQPEDRPNFAIILERIEYC 302
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase
domain, hormone-growth factor complex; 1.50A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A*
1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A*
3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A*
1gag_A* 1irk_A 3bu3_A* ...
Length = 322
Score = 39.6 bits (93), Expect = 4e-04
Identities = 8/32 (25%), Positives = 18/32 (56%)
Query: 162 SQDVKDVLMKCWSYKPSDRPDFITLMKSLEKL 193
+ +++ CW Y P RP F+ ++ S+++
Sbjct: 266 PDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 297
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 39.7 bits (93), Expect = 4e-04
Identities = 13/71 (18%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 135 PFKDQSPESIIFQ------VGKGMKPSL----ANLQASQDVKDVLMKCWSYKPSDRPDFI 184
P+ D P ++ K ++PS ++ + + + ++ +CW++ P+ R +
Sbjct: 261 PYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTAL 320
Query: 185 TLMKSLEKLPK 195
+ K+L K+ +
Sbjct: 321 RVKKTLAKMSE 331
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 39.3 bits (92), Expect = 4e-04
Identities = 9/26 (34%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 169 LMK-CWSYKPSDRPDFITLMKSLEKL 193
+M CW ++P DRP+F +++ +E
Sbjct: 318 IMTQCWQHQPEDRPNFAIILERIEYC 343
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 39.4 bits (92), Expect = 4e-04
Identities = 12/69 (17%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 132 GEWPFKDQSPESIIFQVG-KGMKPSL----ANLQASQDVKDVLMKCWSYKPSDRPDFITL 186
+ D S E + V + ++P++ + +A + + ++ +CW + R + +
Sbjct: 268 YDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI 327
Query: 187 MKSLEKLPK 195
K+L +L +
Sbjct: 328 KKTLSQLSQ 336
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 39.3 bits (92), Expect = 5e-04
Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 10/69 (14%)
Query: 135 PFKDQSPESIIFQ------VGKGMKPSL----ANLQASQDVKDVLMKCWSYKPSDRPDFI 184
PF D P F+ +P++ + + ++ +CW PS R +
Sbjct: 232 PFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTAL 291
Query: 185 TLMKSLEKL 193
+ K+L K+
Sbjct: 292 RIKKTLTKI 300
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 39.3 bits (92), Expect = 5e-04
Identities = 12/69 (17%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 133 EWPFKDQSPESIIFQVG-KGMKPSL----ANLQASQDVKDVLMKCWSYKPSDRPDFITLM 187
+ D S E + V + ++P++ + +A + + ++ +CW + R + +
Sbjct: 230 DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 289
Query: 188 KSLEKLPKK 196
K+L +L ++
Sbjct: 290 KTLSQLSQQ 298
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 38.8 bits (90), Expect = 8e-04
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 161 ASQDVKDVLMKCWSYKPSDRPDFITLMKSLEKL 193
+ ++ ++ CW +PS RP F L++ L L
Sbjct: 321 TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353
>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase,
neurotrophic tyrosine kinase, receptor-related NTRKR2;
2.90A {Homo sapiens}
Length = 289
Score = 38.0 bits (89), Expect = 0.001
Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 169 LM-KCWSYKPSDRPDFITLMKSLEK 192
LM +CW+ PS RP F + L
Sbjct: 262 LMIECWNEFPSRRPRFKDIHSRLRA 286
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 37.2 bits (87), Expect = 0.002
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 125 VWFELLCGEWPFKDQSPESIIFQ-VGKGMK-PSLANLQASQDVKDVLMKCWSYKPSDRP 181
V +E+L GE PF SP S+ +Q V + PS + S D+ V++K + P +R
Sbjct: 208 VLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRY 266
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 36.8 bits (86), Expect = 0.003
Identities = 12/60 (20%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 125 VWFELLCGEWPFKDQSPESIIFQ-VGKGM--KPSLANLQASQDVKDVLMKCWSYKPSDRP 181
V +E+L GE PF ++ SI + + + + Q + +V+++ ++R
Sbjct: 201 VLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRY 260
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 36.7 bits (85), Expect = 0.003
Identities = 12/85 (14%), Positives = 26/85 (30%), Gaps = 11/85 (12%)
Query: 135 PFKDQSPESIIFQ------VGKGMKPSL-----ANLQASQDVKDVLMKCWSYKPSDRPDF 183
F+ + F+ + +P N A + +K+ + CW R
Sbjct: 247 AFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTA 306
Query: 184 ITLMKSLEKLPKKRILARSPSHPLN 208
+ + +L +S S +
Sbjct: 307 QXAEERMAELMMIWERNKSVSPTAH 331
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 36.6 bits (84), Expect = 0.004
Identities = 8/62 (12%), Positives = 18/62 (29%), Gaps = 7/62 (11%)
Query: 127 FELLCGEWPFKDQSPES-------IIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPSD 179
+ + C PF +P + G + VK ++ + ++
Sbjct: 284 YRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRR 343
Query: 180 RP 181
R
Sbjct: 344 RL 345
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 36.6 bits (85), Expect = 0.004
Identities = 14/83 (16%), Positives = 26/83 (31%), Gaps = 11/83 (13%)
Query: 125 VW------FELLCGEWPFKDQSPESIIFQ-VGKGM--KPSLANLQASQDVKDVLMKCWSY 175
+W + + PF + +F + P N ++
Sbjct: 235 IWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNF 294
Query: 176 KPSDRPDFITLMKSLEKLPKKRI 198
++ DF+ L L K P +RI
Sbjct: 295 LSNEDIDFLKLF--LRKNPAERI 315
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 36.5 bits (85), Expect = 0.004
Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Query: 125 VWFELLCGEWPFKDQSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPSDRPDFI 184
+ ELL + S + G+ + K +L K S KP DRP+
Sbjct: 210 ILAELLHVCDTAFETS--KFFTDLRDGIISD----IFDKKEKTLLQKLLSKKPEDRPNTS 263
Query: 185 TLMKSLEKLPKKRILARSPSHP 206
++++L K+ ++ H
Sbjct: 264 EILRTL--TVWKKSPEKNERHT 283
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB
structural genomics consortium, TBSG fold, FHAA,
transferase; 2.26A {Mycobacterium tuberculosis} PDB:
3oun_B* 3otv_A 3ouk_A
Length = 286
Score = 36.3 bits (84), Expect = 0.004
Identities = 8/60 (13%), Positives = 16/60 (26%), Gaps = 5/60 (8%)
Query: 127 FELLCGEWPFKDQSPESIIFQVGKGMK-----PSLANLQASQDVKDVLMKCWSYKPSDRP 181
+ LL WP + S + + P+ + + V + R
Sbjct: 193 YALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIRS 252
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 36.2 bits (84), Expect = 0.005
Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 7/71 (9%)
Query: 125 VW------FELLCGEWPFKD-QSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKP 177
VW + + G+ PF+ + S + + +D++DVL C P
Sbjct: 203 VWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDP 262
Query: 178 SDRPDFITLMK 188
R L+
Sbjct: 263 KQRISIPELLA 273
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 35.5 bits (82), Expect = 0.008
Identities = 10/68 (14%), Positives = 25/68 (36%), Gaps = 5/68 (7%)
Query: 133 EWPFKDQSPESIIFQVG-KGMKPSLAN----LQASQDVKDVLMKCWSYKPSDRPDFITLM 187
E + S E + V K +P L + + + + +CW + R +
Sbjct: 251 EEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVG 310
Query: 188 KSLEKLPK 195
+ + ++ +
Sbjct: 311 ERITQMQR 318
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 35.6 bits (82), Expect = 0.008
Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 7/71 (9%)
Query: 125 VW------FELLCGEWPFKD-QSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKP 177
VW + + G+ PF+ + S + + +D++DVL C P
Sbjct: 250 VWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDP 309
Query: 178 SDRPDFITLMK 188
R L+
Sbjct: 310 KQRISIPELLA 320
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 35.4 bits (82), Expect = 0.010
Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 7/71 (9%)
Query: 125 VW------FELLCGEWPFKD-QSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKP 177
VW + + G+ PF+ + S + + +D++DVL C P
Sbjct: 222 VWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDP 281
Query: 178 SDRPDFITLMK 188
R L+
Sbjct: 282 KQRISIPELLA 292
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 35.0 bits (81), Expect = 0.011
Identities = 11/67 (16%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Query: 125 VWFELLCGEWPFKDQSPESIIFQVGKGMK--PSLANLQASQDVKDVLMKCWSYKPSDRPD 182
++FE++ +I+ ++ P + + K ++ + P+ RP
Sbjct: 220 IFFEMIYP--FSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPG 277
Query: 183 FITLMKS 189
TL+ S
Sbjct: 278 ARTLLNS 284
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 35.1 bits (81), Expect = 0.012
Identities = 9/58 (15%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Query: 127 FELLC-GEWPFKDQSPESIIFQVGKGMKPSLANLQ-ASQDVKDVLMKCWSYKPSDRPD 182
+ ++ G PF +G L + ++++ K + P RP
Sbjct: 220 YYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPS 277
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 35.0 bits (81), Expect = 0.013
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 124 TVWFELLCGEWPFKD-QSPESIIFQVGKGMK-PSLANLQASQDVKDVLMKCWSYKPSDRP 181
T+ E+ G+ PF + P++ +F+VG P + S + K ++KC+ P R
Sbjct: 214 TI-IEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPE-SMSAEAKAFILKCFEPDPDKRA 271
Query: 182 DFITLMK 188
L+
Sbjct: 272 CANDLLV 278
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 34.0 bits (78), Expect = 0.025
Identities = 13/82 (15%), Positives = 29/82 (35%), Gaps = 5/82 (6%)
Query: 127 FELLCGEWPFKDQSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPSDRPDFITL 186
+ L + PF+D + I+ G + ++ P +R +
Sbjct: 244 YLLCFRQHPFEDGAKLRIV----NGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEV 299
Query: 187 MKSLEKLPKKR-ILARSPSHPL 207
+ L+++ R + +SP L
Sbjct: 300 VHQLQEIAAARNVNPKSPITEL 321
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 34.4 bits (78), Expect = 0.029
Identities = 24/212 (11%), Positives = 46/212 (21%), Gaps = 75/212 (35%)
Query: 4 KDDSIFADMLTRIRLGVLSQKDES-TLTDRLVSLEQPSLAGRLKEVTQHLSSLPENTVCL 62
+ + D L+ +S S TLT L K + LP +
Sbjct: 273 RFKQV-TDFLSAATTTHISLDHHSMTLTPDE-VKSL--LL---KYLDCRPQDLPREVLTT 325
Query: 63 LPTRHKCEQLNKAMINSIEEPAIHIDAGRRVPSYNNNNNNNNNNNNNNNNNNNNNNNNIH 122
P ++I + + +N + N + +
Sbjct: 326 NP-------RRLSII------------AESIR----------DGLATWDNWKHVNCDKLT 356
Query: 123 RTVWFELLCGEWPFKDQSPESI--------IFQVGKGMKPSLANLQASQDVK---DVLMK 171
+ E P +F +L
Sbjct: 357 TII-------ESSLNVLEPAEYRKMFDRLSVFP---------------PSAHIPTILLSL 394
Query: 172 CWSYKPSDRPDFITLMKSLEKLPKKRILARSP 203
W + + KL K ++ + P
Sbjct: 395 IWFDVIKSDVMVV-----VNKLHKYSLVEKQP 421
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 33.3 bits (76), Expect = 0.048
Identities = 14/80 (17%), Positives = 22/80 (27%), Gaps = 21/80 (26%)
Query: 125 VW------FELLCGEWPFKDQSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPS 178
W LL G PF + I QV K N ++
Sbjct: 259 AWSAGVLLHLLLMGAVPFPGVNDADTISQVLNK-KLCFEN------------PNYNVLSP 305
Query: 179 DRPDFITLMKSLEKLPKKRI 198
D ++ + L + +R
Sbjct: 306 LARDLLSNL--LNRNVDERF 323
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 33.1 bits (76), Expect = 0.051
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 128 ELLCGEWPFKDQSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPSDRPDFITLM 187
E+ G P D P +F + + P L + + S+ + + C S RP LM
Sbjct: 226 EMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLM 285
Query: 188 KS--LEKLPKKRILA 200
K + P +R +
Sbjct: 286 KHPFIRDQPNERQVR 300
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 32.7 bits (75), Expect = 0.069
Identities = 19/77 (24%), Positives = 26/77 (33%), Gaps = 15/77 (19%)
Query: 125 VWFELLCGEWPFKDQSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPSDRPDFI 184
+ + LL G PF ++ I+ +V G K + W D D I
Sbjct: 211 ILYILLSGTPPFYGKNEYDILKRVETG-KYAFDL------------PQWRTISDDAKDLI 257
Query: 185 TLMKSLEKLPKKRILAR 201
M L P RI A
Sbjct: 258 RKM--LTFHPSLRITAT 272
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 32.7 bits (75), Expect = 0.074
Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Query: 125 VWFELLCGEWPFKDQSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPSDRPDFI 184
+ FELL +PF Q + +K Q ++ S P +RP+ I
Sbjct: 219 ILFELL---YPFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAI 275
Query: 185 TLMKS 189
++++
Sbjct: 276 NIIEN 280
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 32.8 bits (75), Expect = 0.077
Identities = 21/77 (27%), Positives = 28/77 (36%), Gaps = 15/77 (19%)
Query: 125 VWFELLCGEWPFKDQSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPSDRPDFI 184
+ + LLCG PF Q+ + II +V KG K W + + I
Sbjct: 236 IMYILLCGYPPFGGQNDQDIIKKVEKG-KYYFDF------------NDWKNISDEAKELI 282
Query: 185 TLMKSLEKLPKKRILAR 201
LM L KR A
Sbjct: 283 KLM--LTYDYNKRCTAE 297
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 32.4 bits (74), Expect = 0.091
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 125 VWFELLCGEWPFKDQSPESIIFQVGKGMKPSLANL---QASQDVKDVLMKCWSYKPSDRP 181
+ + LL G PF + I+ +V KG K + + S+ KD++ K +Y PS R
Sbjct: 216 ILYILLSGCPPFNGANEYDILKKVEKG-KYTFELPQWKKVSESAKDLIRKMLTYVPSMRI 274
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 32.4 bits (74), Expect = 0.093
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 15/77 (19%)
Query: 125 VWFELLCGEWPFKDQSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPSDRPDFI 184
+ F LL G PF Q+ + I+ +V KG K + + W D I
Sbjct: 226 ILFILLAGYPPFGGQTDQEILRKVEKG-KYTFDS------------PEWKNVSEGAKDLI 272
Query: 185 TLMKSLEKLPKKRILAR 201
M L+ ++RI A+
Sbjct: 273 KQM--LQFDSQRRISAQ 287
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 31.8 bits (71), Expect = 0.093
Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 10/39 (25%)
Query: 153 KPSLANLQASQDVKDVLMKCWSYKPSDRPDFITLMKSLE 191
K +L LQAS +K Y P + + ++E
Sbjct: 19 KQALKKLQAS-------LKL--YADDSAPA-LAIKATME 47
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 32.3 bits (74), Expect = 0.094
Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 127 FELLCGEWPFKDQSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPSDRPDFITL 186
E ++ ++ +G P + SQ+ ++L P RP + L
Sbjct: 222 VCAAGAEPLPRNGDQ---WHEIRQGRLPRIPQ-VLSQEFTELLKVMIHPDPERRPSAMAL 277
Query: 187 MK 188
+K
Sbjct: 278 VK 279
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 32.0 bits (73), Expect = 0.13
Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 8/74 (10%)
Query: 128 ELLCGEWPFKDQSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPSDRPD----- 182
EL + P + + S ++ + + P+L + S+ ++ + C P DRP
Sbjct: 245 ELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLL 304
Query: 183 ---FITLMKSLEKL 193
F+ + +
Sbjct: 305 KHRFVLRERPPTVI 318
>3upu_A ATP-dependent DNA helicase DDA; RECA-like domain, SH3 domain,
PIN-tower interface, coupling hydrolysis to DNA
unwinding, ssDNA; 3.30A {Enterobacteria phage T4}
Length = 459
Score = 31.9 bits (72), Expect = 0.16
Identities = 16/124 (12%), Positives = 31/124 (25%), Gaps = 4/124 (3%)
Query: 1 MRQKDDSIFADMLTRIRLGVLSQKDESTLTDRLVSLEQPSLAGRLKEVTQHLSSL--PEN 58
R ++ D+ T +R G +L + + SL
Sbjct: 197 KRS--NAPIIDVATDVRNGKWIYDKVVDGHGVRGFTGDTALRDFMVNYFSIVKSLDDLFE 254
Query: 59 TVCLLPTRHKCEQLNKAMINSIEEPAIHIDAGRRVPSYNNNNNNNNNNNNNNNNNNNNNN 118
+ T ++LN + I E G + + + NN
Sbjct: 255 NRVMAFTNKSVDKLNSIIRKKIFETDKDFIVGEIIVMQEPLFKTYKIDGKPVSEIIFNNG 314
Query: 119 NNIH 122
+
Sbjct: 315 QLVR 318
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 31.5 bits (72), Expect = 0.16
Identities = 10/62 (16%), Positives = 18/62 (29%), Gaps = 3/62 (4%)
Query: 127 FELLCGEWPFKDQSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPSDRPDFITL 186
E+ C + Q + P S +++ VL+ P R L
Sbjct: 246 LEVACNMELPHGGEGWQQLRQ--GYLPPEFTA-GLSSELRSVLVMMLEPDPKLRATAEAL 302
Query: 187 MK 188
+
Sbjct: 303 LA 304
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 31.7 bits (72), Expect = 0.18
Identities = 6/55 (10%), Positives = 11/55 (20%), Gaps = 8/55 (14%)
Query: 127 FELLCGEWPFKDQSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPSDRP 181
L + G+ L+ +L + P R
Sbjct: 267 AALTLDLPTRNGRYV--------DGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRF 313
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 31.2 bits (71), Expect = 0.23
Identities = 18/96 (18%), Positives = 41/96 (42%), Gaps = 22/96 (22%)
Query: 124 TVW------FELLCGEWPFKDQSPESIIFQVGKG---MKPSLANLQASQDVKDVLMKCWS 174
VW ++++CG+ PF+ ++ +G + + S + + ++ C +
Sbjct: 231 AVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRV-----SSECQHLIRWCLA 279
Query: 175 YKPSDRPDFITLMKS--LEKLPKKRILARSPSHPLN 208
+PSDRP F + ++ + + A H L+
Sbjct: 280 LRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLS 315
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 30.8 bits (70), Expect = 0.31
Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Query: 127 FELLCGEWPF--KDQSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPSDRPDFI 184
+ ++ GE P+ Q +S+ V + + + S + +L + P RP
Sbjct: 237 YAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQ-SPRHSSALWQLLNSMMTVDPHQRPHIP 295
Query: 185 TLMKSLEKL 193
L+ LE L
Sbjct: 296 LLLSQLEAL 304
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 30.6 bits (70), Expect = 0.34
Identities = 9/57 (15%), Positives = 25/57 (43%), Gaps = 8/57 (14%)
Query: 127 FELLCGEWPFKDQSPESIIFQVGKG---MKPSLANLQASQDVKDVLMKCWSYKPSDR 180
+E L G+ PF+ + + ++ + + ++ +D++ + + PS R
Sbjct: 198 YEFLVGKPPFEANTYQETYKRISRVEFTFPDFV-----TEGARDLISRLLKHNPSQR 249
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 30.3 bits (69), Expect = 0.37
Identities = 16/71 (22%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
Query: 125 VW------FELLCGEWPFKD-QSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKP 177
+W EL +P+ +P + QV + P L + S + D +C
Sbjct: 196 IWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNS 255
Query: 178 SDRPDFITLMK 188
+RP + LM+
Sbjct: 256 KERPTYPELMQ 266
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 30.3 bits (69), Expect = 0.41
Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 125 VWFELLCGEWPFKDQSPESIIFQ-VGKGM-KPSLANLQASQDVKDVLMKCWSYKPSDRP 181
V +E L G P++ S++ + + + +PS V+ + + P DR
Sbjct: 224 VLYECLTGSPPYQGDQL-SVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRY 281
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 30.4 bits (69), Expect = 0.42
Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 20/67 (29%)
Query: 124 TVW------FELLCGEWPFKDQSPESIIFQVGKG---MKPSLANLQASQDVKDVLMKCWS 174
TVW ++++CG+ PF+ ++ + + S D ++ +C +
Sbjct: 221 TVWSLGILLYDMVCGDIPFERDQ------EILEAELHFPAHV-----SPDCCALIRRCLA 269
Query: 175 YKPSDRP 181
KPS RP
Sbjct: 270 PKPSSRP 276
>1s03_H 30S ribosomal protein S8; protein-RNA complex, SPC operon,
transcription-RN; 2.70A {Escherichia coli} SCOP:
d.140.1.1 PDB: 1p6g_H 1p87_H 2avy_H 2aw7_H 2i2p_H
2i2u_H 2qal_H* 2qan_H* 2qb9_H* 2qbb_H* 2qbd_H 2qbf_H
2qbh_H* 2qbj_H* 2qou_H* 2qow_H* 2qoy_H* 2qp0_H* 2vho_H
2vhp_H ...
Length = 129
Score = 29.3 bits (67), Expect = 0.42
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Query: 6 DSIFADMLTRIRLGVLSQKDE 26
D I ADMLTRIR G + K
Sbjct: 4 DPI-ADMLTRIRNGQAANKAA 23
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 30.3 bits (69), Expect = 0.46
Identities = 15/81 (18%), Positives = 24/81 (29%), Gaps = 20/81 (24%)
Query: 127 FELLCGEWPFKDQSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPSDRPDFITL 186
+E L G PF S ++ +K + D I+
Sbjct: 203 YEFLVGMPPFDSPSHTETHRRIVNVD-----------------LKFPPFLSDGSKDLISK 245
Query: 187 MKSLEKLPKKRI-LARSPSHP 206
+ L P +R+ L HP
Sbjct: 246 L--LRYHPPQRLPLKGVMEHP 264
>1sei_A Ribosomal protein S8; prokaryotic, rRNA-binding; 1.90A
{Geobacillus stearothermophilus} SCOP: d.140.1.1
Length = 130
Score = 29.3 bits (67), Expect = 0.50
Identities = 9/21 (42%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Query: 6 DSIFADMLTRIRLGVLSQKDE 26
D I ADMLT IR + + ++
Sbjct: 4 DPI-ADMLTAIRNANMVRHEK 23
>3bbn_H Ribosomal protein S8; small ribosomal subunit, spinach
chloroplast ribosome, ribonucleoprotein particle,
macromolecular complex; 9.40A {Spinacea oleracea}
Length = 134
Score = 29.0 bits (66), Expect = 0.55
Identities = 8/21 (38%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Query: 6 DSIFADMLTRIRLGVLSQKDE 26
D+I AD++T IR +++K
Sbjct: 4 DTI-ADIITCIRNADMNRKGT 23
>2vqe_H 30S ribosomal protein S8, 30S ribosomal protein S6; tRNA-binding,
rRNA-binding, metal-binding, zinc-finger, translation;
HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP:
d.140.1.1 PDB: 1eg0_E* 1fka_H 1gix_K* 1hnw_H* 1hnx_H*
1hnz_H* 1hr0_H 1ibk_H* 1ibl_H* 1ibm_H 1j5e_H 1jgo_K*
1jgp_K* 1jgq_K* 1ml5_K* 1n32_H* 1n33_H* 1n34_H 1n36_H
1pns_H ...
Length = 138
Score = 29.0 bits (66), Expect = 0.55
Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Query: 6 DSIFADMLTRIRLGVLSQKDE 26
D I ADMLTRIR K+
Sbjct: 4 DPI-ADMLTRIRNATRVYKES 23
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 29.9 bits (68), Expect = 0.58
Identities = 15/76 (19%), Positives = 21/76 (27%), Gaps = 22/76 (28%)
Query: 129 LLCGEWPFKDQSPESIIFQVGKG---MKPSLANLQASQDVKDVLMKCWSYKPSDRPDFIT 185
LL G PF S E + + L + D +
Sbjct: 218 LLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPL--TPQAV---------------DLLK 260
Query: 186 LMKSLEKLPKKRILAR 201
M L K P++R A
Sbjct: 261 QM--LTKDPERRPSAA 274
>3rf2_A 30S ribosomal protein S8; RNA-binding protein, hyperthermophilic
bacterium, ribosome; 2.16A {Aquifex aeolicus}
Length = 168
Score = 29.4 bits (66), Expect = 0.61
Identities = 7/21 (33%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Query: 6 DSIFADMLTRIRLGVLSQKDE 26
D I ADM + I+ ++ + D
Sbjct: 5 DPI-ADMFSAIKNAIMRRDDF 24
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 30.0 bits (67), Expect = 0.77
Identities = 37/240 (15%), Positives = 76/240 (31%), Gaps = 82/240 (34%)
Query: 22 SQ-KDE--STL---TDRLVSLEQPS----LAGRLKEVTQHLSSLPENTVCLLPTRHKCEQ 71
SQ +++ L T+ + ++P+ L G+ ++SSL E + + +Q
Sbjct: 31 SQLQEQFNKILPEPTEGFAADDEPTTPAELVGKF---LGYVSSLVEPS-----KVGQFDQ 82
Query: 72 LNKAMINSIEEPA-----IH--------------IDAGRRVPSYNNNNNNNNNNNNNNNN 112
+ + E IH + + +Y + +N
Sbjct: 83 VLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSN 142
Query: 113 NN-----NNNNNNIHRTVWFELLCG-----EWPFKD-----QSPESIIFQVGKGMKPSLA 157
+ N + + G + F++ Q+ ++ + K +L+
Sbjct: 143 SALFRAVGEGNAQLV------AIFGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLS 196
Query: 158 NL-QASQDVK-------DVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSP-SHPLN 208
L + + D + ++L W PS+ PD K L P S PL
Sbjct: 197 ELIRTTLDAEKVFTQGLNILE--WLENPSNTPD-------------KDYLLSIPISCPLI 241
Score = 29.2 bits (65), Expect = 1.1
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 19/84 (22%)
Query: 134 WPFKDQSP----ESIIFQVGKGMKPS--LA--NLQASQDVKDVLMKCWSYKPSDRPDFIT 185
+P P +S+ + +G PS L+ NL Q V+D + K S+ P+ + I+
Sbjct: 314 YPNTSLPPSILEDSL--ENNEG-VPSPMLSISNLTQEQ-VQDYVNKTNSHLPAGKQVEIS 369
Query: 186 LMKSLEKLPKKRILARSPSHPLNL 209
L+ K +++ P +L
Sbjct: 370 LVNG----AKNLVVS---GPPQSL 386
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 29.5 bits (67), Expect = 0.80
Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 23/76 (30%)
Query: 129 LLCGEWPFKDQSPESIIFQVGKGM----KPSLANLQASQDVKDVLMKCWSYKPSDRPDFI 184
LLCG PF + ++ ++ +G + N+ S + I
Sbjct: 200 LLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNV--SPQAE---------------SLI 242
Query: 185 TLMKSLEKLPKKRILA 200
+ L K PK+RI +
Sbjct: 243 RRL--LTKSPKQRITS 256
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 29.3 bits (66), Expect = 0.93
Identities = 14/83 (16%), Positives = 27/83 (32%), Gaps = 12/83 (14%)
Query: 127 FELLCGEWPFKD----QSPESIIFQVGKGMKPSLANLQASQDVKDVL-----MKCWSYKP 177
+ G PF+ + + +++++ G KPS A + + M
Sbjct: 214 YHAATGSLPFRPFEGPRRNKEVMYKIITG-KPSGAISGVQKAENGPIDWSGDMPVSCSLS 272
Query: 178 SDRPDFIT--LMKSLEKLPKKRI 198
+T L LE +K
Sbjct: 273 RGLQVLLTPVLANILEADQEKCW 295
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 29.2 bits (66), Expect = 0.94
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 128 ELLCGEWPFKDQSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPSDRPDFITLM 187
EL GE P + P ++F + K P+L S+ +K+ + C + +PS RP L+
Sbjct: 211 ELARGEPPHSELHPMKVLFLIPKNNPPTLEG-NYSKPLKEFVEACLNKEPSFRPTAKELL 269
Query: 188 K 188
K
Sbjct: 270 K 270
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 28.9 bits (65), Expect = 1.1
Identities = 16/71 (22%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
Query: 125 VW------FELLCGEWPFKD-QSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKP 177
+W EL +P+ +P + QV + P L + S + D +C
Sbjct: 240 IWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNS 299
Query: 178 SDRPDFITLMK 188
+RP + LM+
Sbjct: 300 KERPTYPELMQ 310
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 28.7 bits (65), Expect = 1.1
Identities = 22/82 (26%), Positives = 27/82 (32%), Gaps = 22/82 (26%)
Query: 129 LLCGEWPFKDQSPESIIFQVGKGMKPSLAN---LQASQDVKDVLMKCWSYKPSDRPDFIT 185
LL G PF ++ I+ +V G K + S D K D I
Sbjct: 215 LLSGTPPFYGKNEYDILKRVETG-KYAFDLPQWRTISDDAK---------------DLIR 258
Query: 186 LMKSLEKLPKKRILAR-SPSHP 206
M L P RI A HP
Sbjct: 259 KM--LTFHPSLRITATQCLEHP 278
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 28.7 bits (64), Expect = 1.5
Identities = 8/82 (9%), Positives = 22/82 (26%), Gaps = 10/82 (12%)
Query: 127 FELLCGEWPFKD----QSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPSDRPD 182
+ G PF+ + + +++++ G + + +
Sbjct: 214 YHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSR 273
Query: 183 FIT------LMKSLEKLPKKRI 198
+ L LE +K
Sbjct: 274 GLQVLLTPVLANILEADQEKCW 295
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 28.7 bits (65), Expect = 1.5
Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 14/66 (21%)
Query: 125 VW------FELLCGEWPFKDQSPESIIFQVGKG---MKPSLANLQASQDVKDVLMKCWSY 175
VW + LL G PF + ++ + +V M L S + KD++ +
Sbjct: 195 VWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFL-----SIEAKDLIHQLLRR 249
Query: 176 KPSDRP 181
P+DR
Sbjct: 250 NPADRL 255
>2rqf_A HJHBP, hemolymph juvenIle hormone binding protein; HET: JH3; NMR
{Bombyx mori} PDB: 3a1z_A 3aos_A* 3aot_A*
Length = 227
Score = 28.1 bits (62), Expect = 2.1
Identities = 11/77 (14%), Positives = 30/77 (38%), Gaps = 7/77 (9%)
Query: 92 RVPSYNNNNNNNNNNNNNNNNNNNNNNNNIHRTVWFELLCGEWPFKDQSPESIIFQVGKG 151
P +++ ++ ++ NN+ + +T+ +C + E+ V
Sbjct: 157 GEPKITLSSDLSSALEKDSGNNSLEPDMEPLKTLRQAAIC-------KIAEACYISVVHN 209
Query: 152 MKPSLANLQASQDVKDV 168
++ S L AS +++
Sbjct: 210 IRASAKILPASSFFENL 226
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 27.9 bits (62), Expect = 2.3
Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 5/66 (7%)
Query: 125 VWFELLCGEWPFKDQS-PESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPSDRPDF 183
+ FELL + F Q II V P L Q ++ S P++RP+
Sbjct: 265 ILFELL---YSFSTQMERVRIITDVRNLKFPLLFT-QKYPQEHMMVQDMLSPSPTERPEA 320
Query: 184 ITLMKS 189
++++
Sbjct: 321 TDIIEN 326
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 28.0 bits (63), Expect = 2.3
Identities = 16/74 (21%), Positives = 24/74 (32%), Gaps = 17/74 (22%)
Query: 129 LLCGEWPFKDQSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPSDRP-DFITLM 187
LL G PF + ++ + G S + D SD D ++
Sbjct: 222 LLAGSPPFWHRKQMLMLRMIMSG-NYQF----GSPEWDDY---------SDTVKDLVSRF 267
Query: 188 KSLEKLPKKRILAR 201
L P+KR A
Sbjct: 268 --LVVQPQKRYTAE 279
>2iny_A Hexon protein, late protein 2; avian adenovirus, CELO, major coat
protein, crystal P nanotechnology, viral jelly roll,
viral protein; 3.90A {Fowl adenovirus 1}
Length = 942
Score = 28.4 bits (63), Expect = 2.5
Identities = 4/28 (14%), Positives = 8/28 (28%)
Query: 94 PSYNNNNNNNNNNNNNNNNNNNNNNNNI 121
P +N N + N + +
Sbjct: 392 PDLSNVKIYTNGQQDKGNVVAGTVSTQL 419
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase,
inhibitor, transf transferase inhibitor complex; HET:
0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A*
2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A*
2h9v_A*
Length = 410
Score = 28.1 bits (63), Expect = 2.5
Identities = 10/49 (20%), Positives = 20/49 (40%), Gaps = 6/49 (12%)
Query: 127 FELLCGEWPFKDQSP----ESIIFQVGKGMKPSLANLQASQDVKDVLMK 171
+E+L G+ PF S I+ K + S++ K+++
Sbjct: 264 YEMLVGDTPFYADSLVGTYSKIMN--HKNSLTFPDDNDISKEAKNLICA 310
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 27.9 bits (62), Expect = 2.7
Identities = 15/92 (16%), Positives = 24/92 (26%), Gaps = 4/92 (4%)
Query: 101 NNNNNNNNNNNNNNNNNNNNIHRTVWFELLCGEWPFKDQSPESIIF----QVGKGMKPSL 156
+ + D P IF + P L
Sbjct: 233 PDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKL 292
Query: 157 ANLQASQDVKDVLMKCWSYKPSDRPDFITLMK 188
+ S + +D + KC P++R D LM
Sbjct: 293 PSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center
for structural genomics, JCSG, protein structure INI
PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Length = 495
Score = 27.9 bits (62), Expect = 2.8
Identities = 3/34 (8%), Positives = 8/34 (23%)
Query: 93 VPSYNNNNNNNNNNNNNNNNNNNNNNNNIHRTVW 126
+ N+ +N + + W
Sbjct: 54 AMGSDVVLNSKYGFRTHNEFSAIYGKGGTNTLSW 87
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD,
STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus
thermophilus}
Length = 385
Score = 27.5 bits (62), Expect = 3.2
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 10/35 (28%)
Query: 10 ADMLTRI--------RLGVLSQKDESTLTDRLVSL 36
A+ML RL L KDE LT VSL
Sbjct: 288 AEMLAWHTEGLLLAWRLARL--KDEGKLTPAQVSL 320
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 27.6 bits (62), Expect = 3.3
Identities = 16/80 (20%), Positives = 26/80 (32%), Gaps = 23/80 (28%)
Query: 125 VW------FELLCGEWPFKDQSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPS 178
VW + + G+ PF D+ + ++ +
Sbjct: 223 VWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQ---------------ALEFPDQPDIAE 267
Query: 179 DRPDFITLMKSLEKLPKKRI 198
D D IT M L+K P+ RI
Sbjct: 268 DLKDLITRM--LDKNPESRI 285
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase,
decarboxylation, flavin protein, oxidoreductase; HET:
FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB:
2r0n_A* 1sir_A* 2r0m_A*
Length = 392
Score = 27.6 bits (62), Expect = 3.3
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 10/35 (28%)
Query: 10 ADMLTRI--------RLGVLSQKDESTLTDRLVSL 36
ADMLT I +LG L KD+ +VSL
Sbjct: 291 ADMLTEITLGLHACLQLGRL--KDQDKAAPEMVSL 323
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 27.7 bits (62), Expect = 3.4
Identities = 11/56 (19%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Query: 129 LLCGEWPFKDQSPESIIF-QVGKGM--KPSLANLQASQDVKDVLMKCWSYKPSDRP 181
L G PF + + + Q+ G + S+ D++ K P R
Sbjct: 337 CLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARF 392
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 27.4 bits (61), Expect = 3.4
Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 17/73 (23%)
Query: 129 LLCGEWPFKDQSPESIIFQVGKGMKPSLANLQASQDVKDVLMKCWSYKPSDRP-DFITLM 187
LL G PF + ++ + +G + +S + D S D I+ +
Sbjct: 298 LLAGSPPFWHRRQILMLRMIMEG-QYQF----SSPEWDDR---------SSTVKDLISRL 343
Query: 188 KSLEKLPKKRILA 200
L+ P+ R+ A
Sbjct: 344 --LQVDPEARLTA 354
>1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase
(glucosidase); 1.90A {Streptomyces plicatus} SCOP:
c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A
1c93_A
Length = 271
Score = 27.3 bits (60), Expect = 3.5
Identities = 6/36 (16%), Positives = 12/36 (33%), Gaps = 1/36 (2%)
Query: 172 CWSYKPSDRPDFITLMKSL-EKLPKKRILARSPSHP 206
+ F+ L+ +L +P K I +
Sbjct: 138 NNGTAQPNDSSFVHLVTALRANMPDKIISLYNIGPA 173
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald
biostructures, structu genomics; HET: FDA; 1.70A
{Mycobacterium smegmatis}
Length = 403
Score = 27.6 bits (62), Expect = 3.6
Identities = 11/35 (31%), Positives = 11/35 (31%), Gaps = 10/35 (28%)
Query: 10 ADMLTRI--------RLGVLSQKDESTLTDRLVSL 36
ADM LG KD L VSL
Sbjct: 305 ADMTLEYGKGFLLALHLGRQ--KDAGELAPEQVSL 337
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase,
mycobacerium smegmatis, S genomics; HET: FDA; 1.45A
{Mycobacterium smegmatis}
Length = 399
Score = 27.5 bits (62), Expect = 4.0
Identities = 8/35 (22%), Positives = 13/35 (37%), Gaps = 10/35 (28%)
Query: 10 ADMLTRI--------RLGVLSQKDESTLTDRLVSL 36
A+M + LG + KD + +SL
Sbjct: 300 ANMTVELGKGMLLAIHLGRI--KDAEGVRPEQISL 332
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening,
optimization, protein crystallization, structural
genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei
1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Length = 396
Score = 27.5 bits (62), Expect = 4.0
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 10/35 (28%)
Query: 10 ADMLTRI--------RLGVLSQKDESTLTDRLVSL 36
ADM T I RLG + KDE T + S+
Sbjct: 298 ADMQTEITLGLQGVLRLGRM--KDEGTAAVEITSI 330
>1i6u_A 30S ribosomal protein S8P; protein-RNA interactions, ribosome,
RNA, X-RAY crystallography; 2.60A {Methanocaldococcus
jannaschii} SCOP: d.140.1.1
Length = 130
Score = 26.7 bits (60), Expect = 4.1
Identities = 4/12 (33%), Positives = 6/12 (50%), Gaps = 1/12 (8%)
Query: 6 DSIFADMLTRIR 17
D + A+ L I
Sbjct: 5 DPL-ANALNHIS 15
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 27.3 bits (61), Expect = 4.6
Identities = 12/57 (21%), Positives = 20/57 (35%), Gaps = 7/57 (12%)
Query: 129 LLCGEWPFKDQSPESIIF-QVGKGM----KPSLANLQASQDVKDVLMKCWSYKPSDR 180
L G PF + + + Q+ G A + S+ D++ K P R
Sbjct: 212 CLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV--SEKALDLVKKLLVVDPKAR 266
>1ytv_M V1AR, vasopressin V1A receptor; GPCR, fusion protein, maltose-
binding protein, sugar binding protein, hormone
receptor; HET: MAL; 1.80A {Homo sapiens}
Length = 84
Score = 25.6 bits (55), Expect = 5.1
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 105 NNNNNNNNNNNNNNNNIHRTVWF 127
N+++NNNNNNNNNN I ++F
Sbjct: 1 NSSSNNNNNNNNNNLGIEENLYF 23
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin,
peroxisome, glyoxysome, fatty acid metabo lipid
metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A
{Arabidopsis thaliana} PDB: 2ix6_A*
Length = 436
Score = 26.8 bits (60), Expect = 5.8
Identities = 8/35 (22%), Positives = 11/35 (31%), Gaps = 10/35 (28%)
Query: 10 ADMLTRI--------RLGVLSQKDESTLTDRLVSL 36
ML + RL L + +T SL
Sbjct: 331 VQMLGNVQAMFLMGWRLCKL--YETGQMTPGQASL 363
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA;
HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Length = 437
Score = 27.0 bits (60), Expect = 5.8
Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Query: 127 FELLCGEWPFKDQSP----ESIIFQVGKGMKPSLANLQASQDVKDVLMK 171
+E+L GE PF +S I+ + P+ S++ KD++ +
Sbjct: 272 YEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVT-DVSENAKDLIRR 319
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 26.9 bits (60), Expect = 5.9
Identities = 14/72 (19%), Positives = 25/72 (34%), Gaps = 12/72 (16%)
Query: 125 VW------FELLCGEWPFKDQSPESIIFQVGKG--MKPSLANLQASQDVKDVLMKCWSYK 176
VW + LL G+ PF+ + ++ K P + ++ K
Sbjct: 224 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTD 279
Query: 177 PSDRPDFITLMK 188
P+ RP L+
Sbjct: 280 PTARPTINELLN 291
>2xzm_H Ribosomal protein S8 containing protein; ribosome, translation;
3.93A {Tetrahymena thermophila} PDB: 2xzn_H
Length = 130
Score = 26.0 bits (58), Expect = 5.9
Identities = 2/12 (16%), Positives = 6/12 (50%), Gaps = 1/12 (8%)
Query: 6 DSIFADMLTRIR 17
+ + A+ L +
Sbjct: 5 NIL-AECLKDLV 15
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 26.8 bits (60), Expect = 6.2
Identities = 13/65 (20%), Positives = 23/65 (35%), Gaps = 12/65 (18%)
Query: 125 VW------FELLCGEWPFKDQSPESIIFQVGKG--MKPSLANLQASQDVKDVLMKCWSYK 176
VW + LL G+ PF+ + ++ K P + ++ K
Sbjct: 198 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTD 253
Query: 177 PSDRP 181
P+ RP
Sbjct: 254 PTARP 258
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 26.7 bits (59), Expect = 6.3
Identities = 16/74 (21%), Positives = 23/74 (31%), Gaps = 19/74 (25%)
Query: 129 LLCGEWPFKDQSPESIIFQVGKGMK--PSLANLQASQDVKDVLMKCWSYKPSDRPDFITL 186
LL G PF ++ + + V A S+D K DFI
Sbjct: 349 LLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGK---------------DFIRK 393
Query: 187 MKSLEKLPKKRILA 200
+ L P R+
Sbjct: 394 L--LLADPNTRMTI 405
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 26.8 bits (60), Expect = 6.4
Identities = 18/76 (23%), Positives = 24/76 (31%), Gaps = 23/76 (30%)
Query: 129 LLCGEWPFKDQSPESIIFQVGKGM----KPSLANLQASQDVKDVLMKCWSYKPSDRPDFI 184
LL G PF + + + V +N S K DFI
Sbjct: 210 LLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT--SALAK---------------DFI 252
Query: 185 TLMKSLEKLPKKRILA 200
+ L K PKKR+
Sbjct: 253 RRL--LVKDPKKRMTI 266
>3u5c_W 40S ribosomal protein S22-A; translation, ribosome, ribosomal,
ribosomal R ribosomal protein, eukaryotic ribosome,
RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB:
3izb_H 3o30_O 3o2z_O 3u5g_W 1s1h_H 3jyv_H* 3iz6_H
2zkq_h
Length = 130
Score = 25.9 bits (58), Expect = 6.6
Identities = 4/12 (33%), Positives = 5/12 (41%), Gaps = 1/12 (8%)
Query: 6 DSIFADMLTRIR 17
+ AD L I
Sbjct: 5 SVL-ADALNAIN 15
>3tia_A Neuraminidase; 6-bladed beta-propeller, calcium binding,
glycosylation, ANT hydrolase-hydrolase inhibitor
complex; HET: NAG BMA MAN LNV; 1.80A {Influenza a virus}
PDB: 3tib_A* 3tic_A* 2bat_A* 1ivd_A* 1inh_A* 1inw_A*
1inx_A* 1ivc_A* 1ing_A* 1ive_A* 1ivf_A* 1ivg_A* 1nn2_A*
2aep_A* 2aeq_A*
Length = 469
Score = 26.5 bits (58), Expect = 7.0
Identities = 6/38 (15%), Positives = 8/38 (21%)
Query: 94 PSYNNNNNNNNNNNNNNNNNNNNNNNNIHRTVWFELLC 131
P N NN + W + C
Sbjct: 55 PIIIERNITEIVYLNNTTIEKEICPKVVEYRNWSKPQC 92
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 26.4 bits (59), Expect = 7.8
Identities = 14/76 (18%), Positives = 25/76 (32%), Gaps = 23/76 (30%)
Query: 129 LLCGEWPFKDQSPESIIFQVGKGM----KPSLANLQASQDVKDVLMKCWSYKPSDRPDFI 184
LL G PF + + + + + ++ S+ K DFI
Sbjct: 211 LLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT--SELAK---------------DFI 253
Query: 185 TLMKSLEKLPKKRILA 200
+ L K +KR+
Sbjct: 254 RKL--LVKETRKRLTI 267
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 26.0 bits (58), Expect = 8.8
Identities = 19/76 (25%), Positives = 25/76 (32%), Gaps = 23/76 (30%)
Query: 129 LLCGEWPFKDQSPESIIFQVGKGM----KPSLANLQASQDVKDVLMKCWSYKPSDRPDFI 184
LL G PF D+ + Q+ G P + + + K I
Sbjct: 200 LLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTV--TPEAK---------------SLI 242
Query: 185 TLMKSLEKLPKKRILA 200
M L PKKRI A
Sbjct: 243 DSM--LTVNPKKRITA 256
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 26.0 bits (58), Expect = 9.1
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 129 LLCGEWPFKDQSPESIIFQVGKG 151
LLCG PF +++ + ++ +G
Sbjct: 200 LLCGYPPFYEETESKLFEKIKEG 222
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 26.2 bits (58), Expect = 9.6
Identities = 14/76 (18%), Positives = 24/76 (31%), Gaps = 23/76 (30%)
Query: 129 LLCGEWPFKDQSPESIIFQVGKGM----KPSLANLQASQDVKDVLMKCWSYKPSDRPDFI 184
LL G PF + + + + + + S+ K DFI
Sbjct: 211 LLSGASPFLGDTKQETLANITAVSYDFDEEFFSQT--SELAK---------------DFI 253
Query: 185 TLMKSLEKLPKKRILA 200
+ L K +KR+
Sbjct: 254 RKL--LVKETRKRLTI 267
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 26.0 bits (58), Expect = 9.7
Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 23/76 (30%)
Query: 129 LLCGEWPFKDQSPESIIFQVGKGM----KPSLANLQASQDVKDVLMKCWSYKPSDRPDFI 184
LL G PF ++ + + + + +N S+ K DFI
Sbjct: 204 LLSGASPFLGETKQETLTNISAVNYDFDEEYFSNT--SELAK---------------DFI 246
Query: 185 TLMKSLEKLPKKRILA 200
+ L K PK+R+
Sbjct: 247 RRL--LVKDPKRRMTI 260
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 26.0 bits (58), Expect = 9.9
Identities = 11/57 (19%), Positives = 22/57 (38%), Gaps = 8/57 (14%)
Query: 127 FELLCGEWPFKDQSPESIIFQ---VGKGMKPSLANLQASQDVKDVLMKCWSYKPSDR 180
++L+ G PF+ + IFQ + P + +D++ K + R
Sbjct: 223 YQLVAGLPPFRAGNEYL-IFQKIIKLEYDFPE----KFFPKARDLVEKLLVLDATKR 274
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.314 0.129 0.378
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,026,785
Number of extensions: 164603
Number of successful extensions: 878
Number of sequences better than 10.0: 1
Number of HSP's gapped: 778
Number of HSP's successfully gapped: 211
Length of query: 217
Length of database: 6,701,793
Length adjustment: 90
Effective length of query: 127
Effective length of database: 4,188,903
Effective search space: 531990681
Effective search space used: 531990681
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.1 bits)