BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6980
(760 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2OZU|A Chain A, Crystal Structure Of Human Myst Histone Acetyltransferase
3 In Complex With Acetylcoenzyme A
Length = 284
Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/281 (66%), Positives = 221/281 (78%), Gaps = 4/281 (1%)
Query: 273 PEQINPAAIEFGQYEVKTWYSSPFPQEYARLPKLFLCEFCLKYTKSKAVLERHRDKCAWR 332
P+ P+ IEFG+YE+ TWYSSP+PQEY+RLPKL+LCEFCLKY KS+ +L++H KC W
Sbjct: 8 PQVRCPSVIEFGKYEIHTWYSSPYPQEYSRLPKLYLCEFCLKYMKSRTILQQHMKKCGWF 67
Query: 333 HPPATEIYRKENLSVFEVDGNQNKFYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDD 392
HPPA EIYRK N+SVFEVDGN + YCQNLCLLAKLFLDH TLYYDVEPFLFYVLTQND
Sbjct: 68 HPPANEIYRKNNISVFEVDGNVSTIYCQNLCLLAKLFLDHXTLYYDVEPFLFYVLTQNDV 127
Query: 393 KGCHLVGYFSKEKHCQQKYNVSCIMTLPQYQRKGYGRFLIDFSYLLSKKEGQRGTPEKPL 452
KGCHLVGYFSKEKHCQQKYNVSCIM LPQYQRKGYGRFLIDFSYLLSK+EGQ G+PEKPL
Sbjct: 128 KGCHLVGYFSKEKHCQQKYNVSCIMILPQYQRKGYGRFLIDFSYLLSKREGQAGSPEKPL 187
Query: 453 SDLGRVSYHAYWKSVLLEYLDTIRNQKLICIDQMCADTGLYHHDVAETLELLGMLRTKHG 512
SDLGR+SY AYWKSV+LE L +N K I I ++ TG+ D+ TL L ML +
Sbjct: 188 SDLGRLSYMAYWKSVILECLYH-QNDKQISIKKLSKLTGICPQDITSTLHHLRMLDFR-- 244
Query: 513 DSSEPCIVINWAIVDAHMKRLEQSKTRIKIDPECLRWTPLV 553
S + I+ ++ HM +L+ + + +DPECLRWTP++
Sbjct: 245 -SDQFVIIRREKLIQDHMAKLQLNLRPVDVDPECLRWTPVI 284
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 25/30 (83%)
Query: 51 PEQINPAAIEFGQYEVKTWYSSPFPQEYAR 80
P+ P+ IEFG+YE+ TWYSSP+PQEY+R
Sbjct: 8 PQVRCPSVIEFGKYEIHTWYSSPYPQEYSR 37
>pdb|2RC4|A Chain A, Crystal Structure Of The Hat Domain Of The Human Moz
Protein
Length = 287
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/281 (66%), Positives = 220/281 (78%), Gaps = 4/281 (1%)
Query: 273 PEQINPAAIEFGQYEVKTWYSSPFPQEYARLPKLFLCEFCLKYTKSKAVLERHRDKCAWR 332
P+ P+ IEFG+YE+ TWYSSP+PQEY+RLPKL+LCEFCLKY KS+ +L++H KC W
Sbjct: 4 PQVRCPSVIEFGKYEIHTWYSSPYPQEYSRLPKLYLCEFCLKYMKSRTILQQHMKKCGWF 63
Query: 333 HPPATEIYRKENLSVFEVDGNQNKFYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDD 392
HPPA EIYRK N+SVFEVDGN + YCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQND
Sbjct: 64 HPPANEIYRKNNISVFEVDGNVSTIYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDV 123
Query: 393 KGCHLVGYFSKEKHCQQKYNVSCIMTLPQYQRKGYGRFLIDFSYLLSKKEGQRGTPEKPL 452
KGCHLVGYFSKEKHCQQKYNVSCIM LPQYQRKGYGRFLIDFSYLLSK+EGQ G+PEKPL
Sbjct: 124 KGCHLVGYFSKEKHCQQKYNVSCIMILPQYQRKGYGRFLIDFSYLLSKREGQAGSPEKPL 183
Query: 453 SDLGRVSYHAYWKSVLLEYLDTIRNQKLICIDQMCADTGLYHHDVAETLELLGMLRTKHG 512
SDLGR+SY AYWKSV+LE L +N K I I ++ TG+ D+ TL L ML +
Sbjct: 184 SDLGRLSYMAYWKSVILECLYH-QNDKQISIKKLSKLTGICPQDITSTLHHLRMLDFR-- 240
Query: 513 DSSEPCIVINWAIVDAHMKRLEQSKTRIKIDPECLRWTPLV 553
S + ++ HM +L+ + + +DPECLRWTP++
Sbjct: 241 -SDQFVRRRREKLIQDHMAKLQLNLRPVDVDPECLRWTPVI 280
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 25/30 (83%)
Query: 51 PEQINPAAIEFGQYEVKTWYSSPFPQEYAR 80
P+ P+ IEFG+YE+ TWYSSP+PQEY+R
Sbjct: 4 PQVRCPSVIEFGKYEIHTWYSSPYPQEYSR 33
>pdb|3QAH|A Chain A, Crystal Structure Of Apo-Form Human Mof Catalytic Domain
Length = 304
Score = 295 bits (756), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 141/271 (52%), Positives = 182/271 (67%), Gaps = 5/271 (1%)
Query: 281 IEFGQYEVKTWYSSPFPQEYARLPKLFLCEFCLKYTKSKAVLERHRDKCAWRHPPATEIY 340
I G YE+ WY SPFP++Y + PKL+LCE+CLKY K + H +C WR PP EIY
Sbjct: 37 IHIGNYEIDAWYFSPFPEDYGKQPKLWLCEYCLKYMKYEKSYRFHLGQCQWRQPPGKEIY 96
Query: 341 RKENLSVFEVDGNQNKFYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDDKGCHLVGY 400
RK N+SV+EVDG +K YCQNLCLLAKLFLDH TLY+DVEPF+FY+LT+ D +G H+VGY
Sbjct: 97 RKSNISVYEVDGKDHKIYCQNLCLLAKLFLDHXTLYFDVEPFVFYILTEVDRQGAHIVGY 156
Query: 401 FSKEKHCQQKYNVSCIMTLPQYQRKGYGRFLIDFSYLLSKKEGQRGTPEKPLSDLGRVSY 460
FSKEK NV+CI+TLP YQR+GYG+FLI FSY LSK E G+PEKPLSDLG++SY
Sbjct: 157 FSKEKESPDGNNVACILTLPPYQRRGYGKFLIAFSYELSKLESTVGSPEKPLSDLGKLSY 216
Query: 461 HAYWKSVLLEYLDTIRNQKLICIDQMCADTGLYHHDVAETLELLGMLRTKHGDSSEPCIV 520
+YW VLLE L R + I + T + +D+ TL+ L M++ G + I
Sbjct: 217 RSYWSWVLLEILRDFRGT--LSIKDLSQMTSITQNDIISTLQSLNMVKYWKG---QHVIC 271
Query: 521 INWAIVDAHMKRLEQSKTRIKIDPECLRWTP 551
+ +V+ H+K + K I +D CL+W P
Sbjct: 272 VTPKLVEEHLKSAQYKKPPITVDSVCLKWAP 302
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 59 IEFGQYEVKTWYSSPFPQEYARNTQV 84
I G YE+ WY SPFP++Y + ++
Sbjct: 37 IHIGNYEIDAWYFSPFPEDYGKQPKL 62
>pdb|4DNC|A Chain A, Crystal Structure Of Human Mof In Complex With Msl1
pdb|4DNC|B Chain B, Crystal Structure Of Human Mof In Complex With Msl1
Length = 289
Score = 295 bits (755), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 141/271 (52%), Positives = 182/271 (67%), Gaps = 5/271 (1%)
Query: 281 IEFGQYEVKTWYSSPFPQEYARLPKLFLCEFCLKYTKSKAVLERHRDKCAWRHPPATEIY 340
I G YE+ WY SPFP++Y + PKL+LCE+CLKY K + H +C WR PP EIY
Sbjct: 13 IHIGNYEIDAWYFSPFPEDYGKQPKLWLCEYCLKYMKYEKSYRFHLGQCQWRQPPGKEIY 72
Query: 341 RKENLSVFEVDGNQNKFYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDDKGCHLVGY 400
RK N+SV+EVDG +K YCQNLCLLAKLFLDH TLY+DVEPF+FY+LT+ D +G H+VGY
Sbjct: 73 RKSNISVYEVDGKDHKIYCQNLCLLAKLFLDHXTLYFDVEPFVFYILTEVDRQGAHIVGY 132
Query: 401 FSKEKHCQQKYNVSCIMTLPQYQRKGYGRFLIDFSYLLSKKEGQRGTPEKPLSDLGRVSY 460
FSKEK NV+CI+TLP YQR+GYG+FLI FSY LSK E G+PEKPLSDLG++SY
Sbjct: 133 FSKEKESPDGNNVACILTLPPYQRRGYGKFLIAFSYELSKLESTVGSPEKPLSDLGKLSY 192
Query: 461 HAYWKSVLLEYLDTIRNQKLICIDQMCADTGLYHHDVAETLELLGMLRTKHGDSSEPCIV 520
+YW VLLE L R + I + T + +D+ TL+ L M++ G + I
Sbjct: 193 RSYWSWVLLEILRDFRGT--LSIKDLSQMTSITQNDIISTLQSLNMVKYWKG---QHVIC 247
Query: 521 INWAIVDAHMKRLEQSKTRIKIDPECLRWTP 551
+ +V+ H+K + K I +D CL+W P
Sbjct: 248 VTPKLVEEHLKSAQYKKPPITVDSVCLKWAP 278
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 59 IEFGQYEVKTWYSSPFPQEYARNTQV 84
I G YE+ WY SPFP++Y + ++
Sbjct: 13 IHIGNYEIDAWYFSPFPEDYGKQPKL 38
>pdb|2PQ8|A Chain A, Myst Histone Acetyltransferase 1
Length = 278
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 141/271 (52%), Positives = 182/271 (67%), Gaps = 5/271 (1%)
Query: 281 IEFGQYEVKTWYSSPFPQEYARLPKLFLCEFCLKYTKSKAVLERHRDKCAWRHPPATEIY 340
I G YE+ WY SPFP++Y + PKL+LCE+CLKY K + H +C WR PP EIY
Sbjct: 11 IHIGNYEIDAWYFSPFPEDYGKQPKLWLCEYCLKYMKYEKSYRFHLGQCQWRQPPGKEIY 70
Query: 341 RKENLSVFEVDGNQNKFYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDDKGCHLVGY 400
RK N+SV EVDG +K YCQNLCLLAKLFLDH+TLY+DVEPF+FY+LT+ D +G H+VGY
Sbjct: 71 RKSNISVHEVDGKDHKIYCQNLCLLAKLFLDHRTLYFDVEPFVFYILTEVDRQGAHIVGY 130
Query: 401 FSKEKHCQQKYNVSCIMTLPQYQRKGYGRFLIDFSYLLSKKEGQRGTPEKPLSDLGRVSY 460
FSKEK NV+CI+TLP YQR+GYG+FLI FSY LSK E G+PEKPLSDLG++SY
Sbjct: 131 FSKEKESPDGNNVACILTLPPYQRRGYGKFLIAFSYELSKLESTVGSPEKPLSDLGKLSY 190
Query: 461 HAYWKSVLLEYLDTIRNQKLICIDQMCADTGLYHHDVAETLELLGMLRTKHGDSSEPCIV 520
+YW VLLE L R + I + T + +D+ TL+ L M++ G + I
Sbjct: 191 RSYWSWVLLENLRDFRGT--LSIKDLSQMTSITQNDIISTLQSLNMVKYWKG---QHVIC 245
Query: 521 INWAIVDAHMKRLEQSKTRIKIDPECLRWTP 551
+ +V+ H+K + K I +D CL+W P
Sbjct: 246 VTPKLVEEHLKSAQYKKPPITVDSVCLKWAP 276
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 59 IEFGQYEVKTWYSSPFPQEYARNTQV 84
I G YE+ WY SPFP++Y + ++
Sbjct: 11 IHIGNYEIDAWYFSPFPEDYGKQPKL 36
>pdb|2GIV|A Chain A, Human Myst Histone Acetyltransferase 1
Length = 295
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 141/271 (52%), Positives = 181/271 (66%), Gaps = 5/271 (1%)
Query: 281 IEFGQYEVKTWYSSPFPQEYARLPKLFLCEFCLKYTKSKAVLERHRDKCAWRHPPATEIY 340
I G YE+ WY SPFP++Y + PKL+LCE+CLKY K + H +C WR PP EIY
Sbjct: 28 IHIGNYEIDAWYFSPFPEDYGKQPKLWLCEYCLKYMKYEKSYRFHLGQCQWRQPPGKEIY 87
Query: 341 RKENLSVFEVDGNQNKFYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDDKGCHLVGY 400
RK N+SV EVDG +K YCQNLCLLAKLFLDH TLY+DVEPF+FY+LT+ D +G H+VGY
Sbjct: 88 RKSNISVHEVDGKDHKIYCQNLCLLAKLFLDHXTLYFDVEPFVFYILTEVDRQGAHIVGY 147
Query: 401 FSKEKHCQQKYNVSCIMTLPQYQRKGYGRFLIDFSYLLSKKEGQRGTPEKPLSDLGRVSY 460
FSKEK NV+CI+TLP YQR+GYG+FLI FSY LSK E G+PEKPLSDLG++SY
Sbjct: 148 FSKEKESPDGNNVACILTLPPYQRRGYGKFLIAFSYELSKLESTVGSPEKPLSDLGKLSY 207
Query: 461 HAYWKSVLLEYLDTIRNQKLICIDQMCADTGLYHHDVAETLELLGMLRTKHGDSSEPCIV 520
+YW VLLE L R + I + T + +D+ TL+ L M++ G + I
Sbjct: 208 RSYWSWVLLENLRDFRGT--LSIKDLSQMTSITQNDIISTLQSLNMVKYWKG---QHVIC 262
Query: 521 INWAIVDAHMKRLEQSKTRIKIDPECLRWTP 551
+ +V+ H+K + K I +D CL+W P
Sbjct: 263 VTPKLVEEHLKSAQYKKPPITVDSVCLKWAP 293
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 59 IEFGQYEVKTWYSSPFPQEYARNTQV 84
I G YE+ WY SPFP++Y + ++
Sbjct: 28 IHIGNYEIDAWYFSPFPEDYGKQPKL 53
>pdb|2Y0M|A Chain A, Crystal Structure Of The Complex Between Dosage
Compensation Factors Msl1 And Mof
Length = 287
Score = 292 bits (748), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 140/271 (51%), Positives = 181/271 (66%), Gaps = 5/271 (1%)
Query: 281 IEFGQYEVKTWYSSPFPQEYARLPKLFLCEFCLKYTKSKAVLERHRDKCAWRHPPATEIY 340
I G YE+ WY SPFP++Y + PKL+LCE+CLKY K + H +C WR PP EIY
Sbjct: 11 IHIGNYEIDAWYFSPFPEDYGKQPKLWLCEYCLKYMKYEKSYRFHLGQCQWRQPPGKEIY 70
Query: 341 RKENLSVFEVDGNQNKFYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDDKGCHLVGY 400
RK N+SV+EVDG +K YCQNLCLLAKLFLDH TLY+DVEPF+FY+LT+ D +G H+VGY
Sbjct: 71 RKSNISVYEVDGKDHKIYCQNLCLLAKLFLDHXTLYFDVEPFVFYILTEVDRQGAHIVGY 130
Query: 401 FSKEKHCQQKYNVSCIMTLPQYQRKGYGRFLIDFSYLLSKKEGQRGTPEKPLSDLGRVSY 460
FSKEK NV+ I+TLP YQR+GYG+FLI FSY LSK E G+PEKPLSDLG++SY
Sbjct: 131 FSKEKESPDGNNVAXILTLPPYQRRGYGKFLIAFSYELSKLESTVGSPEKPLSDLGKLSY 190
Query: 461 HAYWKSVLLEYLDTIRNQKLICIDQMCADTGLYHHDVAETLELLGMLRTKHGDSSEPCIV 520
+YW VLLE L R + I + T + +D+ TL+ L M++ G + I
Sbjct: 191 RSYWSWVLLEILRDFRGT--LSIKDLSQMTSITQNDIISTLQSLNMVKYWKG---QHVIX 245
Query: 521 INWAIVDAHMKRLEQSKTRIKIDPECLRWTP 551
+ +V+ H+K + K I +D CL+W P
Sbjct: 246 VTPKLVEEHLKSAQYKKPPITVDSVCLKWAP 276
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 59 IEFGQYEVKTWYSSPFPQEYARNTQV 84
I G YE+ WY SPFP++Y + ++
Sbjct: 11 IHIGNYEIDAWYFSPFPEDYGKQPKL 36
>pdb|2OU2|A Chain A, Acetyltransferase Domain Of Human Hiv-1 Tat Interacting
Protein, 60kda, Isoform 3
Length = 280
Score = 290 bits (743), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 144/279 (51%), Positives = 189/279 (67%), Gaps = 9/279 (3%)
Query: 277 NPAAIEFGQYEVKTWYSSPFPQEYARLPKLFLCEFCLKYTKSKAVLERHRDKCAWRHPPA 336
N IE G++ +K WY SP+PQE LP L+LCEFCLKY +S L+RH KC RHPP
Sbjct: 5 NIECIELGRHRLKPWYFSPYPQELTTLPVLYLCEFCLKYGRSLKCLQRHLTKCDLRHPPG 64
Query: 337 TEIYRKENLSVFEVDGNQNKFYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDDKGCH 396
EIYRK +S FE+DG +NK Y QNLCLLAK FLDH TLYYD +PFLFYV+T+ D KG H
Sbjct: 65 NEIYRKGTISFFEIDGRKNKSYSQNLCLLAKCFLDHXTLYYDTDPFLFYVMTEYDCKGFH 124
Query: 397 LVGYFSKEKHCQQKYNVSCIMTLPQYQRKGYGRFLIDFSYLLSKKEGQRGTPEKPLSDLG 456
+VGYFSKEK + YNV+CI+TLP YQR+GYG+ LI+FSY LSK EG+ GTPEKPLSDLG
Sbjct: 125 IVGYFSKEKESTEDYNVACILTLPPYQRRGYGKLLIEFSYELSKVEGKTGTPEKPLSDLG 184
Query: 457 RVSYHAYWKSVLLEYLDTIRNQK----LICIDQMCADTGLYHHDVAETLELLGMLRTKHG 512
+SY +YW +LE L ++++ I I+++ T + DV TL+ L ++ G
Sbjct: 185 LLSYRSYWSQTILEILMGLKSESGERPQITINEISEITSIKKEDVISTLQYLNLINYYKG 244
Query: 513 DSSEPCIVINWAIVDAHMKRLEQSKTRIKIDPECLRWTP 551
+ + ++ IVD H + + K ++ID +CL +TP
Sbjct: 245 ---QYILTLSEDIVDGHERAM--LKRLLRIDSKCLHFTP 278
Score = 32.7 bits (73), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 55 NPAAIEFGQYEVKTWYSSPFPQE 77
N IE G++ +K WY SP+PQE
Sbjct: 5 NIECIELGRHRLKPWYFSPYPQE 27
>pdb|3TOB|A Chain A, Human Mof E350q Crystal Structure With Active Site Lysine
Partially Acetylated
Length = 270
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 140/272 (51%), Positives = 182/272 (66%), Gaps = 8/272 (2%)
Query: 281 IEFGQYEVKTWYSSPFPQEYARLPKLFLCEFCLKYTKSKAVLERHRDKCAWRHPPATEIY 340
I G YE+ WY SPFP++Y + PKL+LCE+CLKY K + H +C WR PP EIY
Sbjct: 6 IHIGNYEIDAWYFSPFPEDYGKQPKLWLCEYCLKYMKYEKSYRFHLGQCQWRQPPGKEIY 65
Query: 341 RKENLSVFEVDGNQNKFYCQNLCLLAKLFLDH-KTLYYDVEPFLFYVLTQNDDKGCHLVG 399
RK N+SV+EVDG +K YCQNLCLLAKLFLDH KTLY+DVEPF+FY+LT+ D +G H+VG
Sbjct: 66 RKSNISVYEVDGKDHKIYCQNLCLLAKLFLDHXKTLYFDVEPFVFYILTEVDRQGAHIVG 125
Query: 400 YFSKEKHCQQKYNVSCIMTLPQYQRKGYGRFLIDFSYLLSKKEGQRGTPEKPLSDLGRVS 459
YFSKEK NV+CI+TLP YQR+GYG+FLI FSY LSK E G+P+KPLSDLG++S
Sbjct: 126 YFSKEKESPDGNNVACILTLPPYQRRGYGKFLIAFSYELSKLESTVGSPQKPLSDLGKLS 185
Query: 460 YHAYWKSVLLEYLDTIRNQKLICIDQMCADTGLYHHDVAETLELLGMLRTKHGDSSEPCI 519
Y +YW VLLE I + I + T + +D+ TL+ L M++ G + I
Sbjct: 186 YRSYWSWVLLE----ILRDGTLSIKDLSQMTSITQNDIISTLQSLNMVKYWKG---QHVI 238
Query: 520 VINWAIVDAHMKRLEQSKTRIKIDPECLRWTP 551
+ +V+ H+K + K I +D CL+W P
Sbjct: 239 CVTPKLVEEHLKSAQYKKPPITVDSVCLKWAP 270
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 59 IEFGQYEVKTWYSSPFPQEYARNTQV 84
I G YE+ WY SPFP++Y + ++
Sbjct: 6 IHIGNYEIDAWYFSPFPEDYGKQPKL 31
>pdb|3TOA|A Chain A, Human Mof Crystal Structure With Active Site Lysine
Partially Acetylated
Length = 266
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/272 (51%), Positives = 181/272 (66%), Gaps = 12/272 (4%)
Query: 281 IEFGQYEVKTWYSSPFPQEYARLPKLFLCEFCLKYTKSKAVLERHRDKCAWRHPPATEIY 340
I G YE+ WY SPFP++Y + PKL+LCE+CLKY K + H +C WR PP EIY
Sbjct: 6 IHIGNYEIDAWYFSPFPEDYGKQPKLWLCEYCLKYMKYEKSYRFHLGQCQWRQPPGKEIY 65
Query: 341 RKENLSVFEVDGNQNKFYCQNLCLLAKLFLDH-KTLYYDVEPFLFYVLTQNDDKGCHLVG 399
RK N+SV+EVDG +K YCQNLCLLAKLFLDH KTLY+DVEPF+FY+LT+ D +G H+VG
Sbjct: 66 RKSNISVYEVDGKDHKIYCQNLCLLAKLFLDHXKTLYFDVEPFVFYILTEVDRQGAHIVG 125
Query: 400 YFSKEKHCQQKYNVSCIMTLPQYQRKGYGRFLIDFSYLLSKKEGQRGTPEKPLSDLGRVS 459
YFSKEK NV+CI+TLP YQR+GYG+FLI FSY LSK E G+PEKPLSDLG++S
Sbjct: 126 YFSKEKESPDGNNVACILTLPPYQRRGYGKFLIAFSYELSKLESTVGSPEKPLSDLGKLS 185
Query: 460 YHAYWKSVLLEYLDTIRNQKLICIDQMCADTGLYHHDVAETLELLGMLRTKHGDSSEPCI 519
Y +YW VLLE I + I + T + +D+ TL+ L M++ G + I
Sbjct: 186 YRSYWSWVLLE----ILRDGTLSIKDLSQMTSITQNDIISTLQSLNMVKYWKG---QHVI 238
Query: 520 VINWAIVDAHMKRLEQSKTRIKIDPECLRWTP 551
+ +V+ H+K S I +D CL+W P
Sbjct: 239 CVTPKLVEEHLK----SAPPITVDSVCLKWAP 266
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 59 IEFGQYEVKTWYSSPFPQEYARNTQV 84
I G YE+ WY SPFP++Y + ++
Sbjct: 6 IHIGNYEIDAWYFSPFPEDYGKQPKL 31
>pdb|1FY7|A Chain A, Crystal Structure Of Yeast Esa1 Histone Acetyltransferase
Domain Complexed With Coenzyme A
Length = 278
Score = 272 bits (695), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 139/275 (50%), Positives = 184/275 (66%), Gaps = 7/275 (2%)
Query: 277 NPAAIEFGQYEVKTWYSSPFPQEYARLPKLFLCEFCLKYTKSKAVLERHRDKCAWRHPPA 336
N I G+YE++ WY SP+P E +++ +F L+Y SK ER+R KC RHPP
Sbjct: 9 NLNRIIMGKYEIEPWYFSPYPIELTDEDFIYIDDFTLQYFGSKKQYERYRKKCTLRHPPG 68
Query: 337 TEIYRKENLSVFEVDGNQNKFYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDDKGCH 396
EIYR + +S FE+DG + + +C+NLCLL+KLFLDHKTLYYDV+PFLFY +T+ D+ G H
Sbjct: 69 NEIYRDDYVSFFEIDGRKQRTWCRNLCLLSKLFLDHKTLYYDVDPFLFYCMTRRDELGHH 128
Query: 397 LVGYFSKEKHCQQKYNVSCIMTLPQYQRKGYGRFLIDFSYLLSKKEGQRGTPEKPLSDLG 456
LVGYFSKEK YNV+CI+TLPQYQR GYG+ LI+FSY LSKKE + G+PEKPLSDLG
Sbjct: 129 LVGYFSKEKESADGYNVACILTLPQYQRMGYGKLLIEFSYELSKKENKVGSPEKPLSDLG 188
Query: 457 RVSYHAYWKSVLLEYLDTIRNQKLICIDQMCADTGLYHHDVAETLELLGMLRTKHGDSSE 516
+SY AYW L+ L + +QK I ID++ + T + D+ T + L +LR G +
Sbjct: 189 LLSYRAYWSDTLITLL--VEHQKEITIDEISSMTSMTTTDILHTAKTLNILRYYKG---Q 243
Query: 517 PCIVINWAIVDAHMKRLEQSKTRIKIDPECLRWTP 551
I +N I+D + RL ++K R IDP L W P
Sbjct: 244 HIIFLNEDILDRY-NRL-KAKKRRTIDPNRLIWKP 276
>pdb|3TO6|A Chain A, Crystal Structure Of Yeast Esa1 Hat Domain Complexed With
H4k16coa Bisubstrate Inhibitor
pdb|3TO7|A Chain A, Crystal Structure Of Yeast Esa1 Hat Domain Bound To
Coenzyme A With Active Site Lysine Acetylated
Length = 276
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 138/275 (50%), Positives = 183/275 (66%), Gaps = 7/275 (2%)
Query: 277 NPAAIEFGQYEVKTWYSSPFPQEYARLPKLFLCEFCLKYTKSKAVLERHRDKCAWRHPPA 336
N I G+YE++ WY SP+P E +++ +F L+Y SK ER+R KC RHPP
Sbjct: 7 NLNRIIMGKYEIEPWYFSPYPIELTDEDFIYIDDFTLQYFGSKKQYERYRKKCTLRHPPG 66
Query: 337 TEIYRKENLSVFEVDGNQNKFYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDDKGCH 396
EIYR + +S FE+DG + + +C+NLCLL+KLFLDH TLYYDV+PFLFY +T+ D+ G H
Sbjct: 67 NEIYRDDYVSFFEIDGRKQRTWCRNLCLLSKLFLDHXTLYYDVDPFLFYCMTRRDELGHH 126
Query: 397 LVGYFSKEKHCQQKYNVSCIMTLPQYQRKGYGRFLIDFSYLLSKKEGQRGTPEKPLSDLG 456
LVGYFSKEK YNV+CI+TLPQYQR GYG+ LI+FSY LSKKE + G+PEKPLSDLG
Sbjct: 127 LVGYFSKEKESADGYNVACILTLPQYQRMGYGKLLIEFSYELSKKENKVGSPEKPLSDLG 186
Query: 457 RVSYHAYWKSVLLEYLDTIRNQKLICIDQMCADTGLYHHDVAETLELLGMLRTKHGDSSE 516
+SY AYW L+ L + +QK I ID++ + T + D+ T + L +LR G +
Sbjct: 187 LLSYRAYWSDTLITLL--VEHQKEITIDEISSMTSMTTTDILHTAKTLNILRYYKG---Q 241
Query: 517 PCIVINWAIVDAHMKRLEQSKTRIKIDPECLRWTP 551
I +N I+D + RL ++K R IDP L W P
Sbjct: 242 HIIFLNEDILDRY-NRL-KAKKRRTIDPNRLIWKP 274
>pdb|1MJ9|A Chain A, Crystal Structure Of Yeast Esa1(C304s) Mutant Complexed
With Coenzyme A
Length = 278
Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 138/275 (50%), Positives = 183/275 (66%), Gaps = 7/275 (2%)
Query: 277 NPAAIEFGQYEVKTWYSSPFPQEYARLPKLFLCEFCLKYTKSKAVLERHRDKCAWRHPPA 336
N I G+YE++ WY SP+P E +++ +F L+Y SK ER+R KC RHPP
Sbjct: 9 NLNRIIMGKYEIEPWYFSPYPIELTDEDFIYIDDFTLQYFGSKKQYERYRKKCTLRHPPG 68
Query: 337 TEIYRKENLSVFEVDGNQNKFYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDDKGCH 396
EIYR + +S FE+DG + + +C+NLCLL+KLFLDHKTLYYDV+PFLFY +T+ D+ G H
Sbjct: 69 NEIYRDDYVSFFEIDGRKQRTWCRNLCLLSKLFLDHKTLYYDVDPFLFYCMTRRDELGHH 128
Query: 397 LVGYFSKEKHCQQKYNVSCIMTLPQYQRKGYGRFLIDFSYLLSKKEGQRGTPEKPLSDLG 456
LVGYFSKEK YNV+ I+TLPQYQR GYG+ LI+FSY LSKKE + G+PEKPLSDLG
Sbjct: 129 LVGYFSKEKESADGYNVASILTLPQYQRMGYGKLLIEFSYELSKKENKVGSPEKPLSDLG 188
Query: 457 RVSYHAYWKSVLLEYLDTIRNQKLICIDQMCADTGLYHHDVAETLELLGMLRTKHGDSSE 516
+SY AYW L+ L + +QK I ID++ + T + D+ T + L +LR G +
Sbjct: 189 LLSYRAYWSDTLITLL--VEHQKEITIDEISSMTSMTTTDILHTAKTLNILRYYKG---Q 243
Query: 517 PCIVINWAIVDAHMKRLEQSKTRIKIDPECLRWTP 551
I +N I+D + RL ++K R IDP L W P
Sbjct: 244 HIIFLNEDILDRY-NRL-KAKKRRTIDPNRLIWKP 276
>pdb|1MJA|A Chain A, Crystal Structure Of Yeast Esa1 Histone Acetyltransferase
Domain Complexed With Acetyl Coenzyme A
Length = 278
Score = 268 bits (686), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 138/275 (50%), Positives = 183/275 (66%), Gaps = 7/275 (2%)
Query: 277 NPAAIEFGQYEVKTWYSSPFPQEYARLPKLFLCEFCLKYTKSKAVLERHRDKCAWRHPPA 336
N I G+YE++ WY SP+P E +++ +F L+Y SK ER+R KC RHPP
Sbjct: 9 NLNRIIMGKYEIEPWYFSPYPIELTDEDFIYIDDFTLQYFGSKKQYERYRKKCTLRHPPG 68
Query: 337 TEIYRKENLSVFEVDGNQNKFYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDDKGCH 396
EIYR + +S FE+DG + + +C+NLCLL+KLFLDHKTLYYDV+PFLFY +T+ D+ G H
Sbjct: 69 NEIYRDDYVSFFEIDGRKQRTWCRNLCLLSKLFLDHKTLYYDVDPFLFYCMTRRDELGHH 128
Query: 397 LVGYFSKEKHCQQKYNVSCIMTLPQYQRKGYGRFLIDFSYLLSKKEGQRGTPEKPLSDLG 456
LVGYFSKEK YNV+ I+TLPQYQR GYG+ LI+FSY LSKKE + G+PEKPLSDLG
Sbjct: 129 LVGYFSKEKESADGYNVAXILTLPQYQRMGYGKLLIEFSYELSKKENKVGSPEKPLSDLG 188
Query: 457 RVSYHAYWKSVLLEYLDTIRNQKLICIDQMCADTGLYHHDVAETLELLGMLRTKHGDSSE 516
+SY AYW L+ L + +QK I ID++ + T + D+ T + L +LR G +
Sbjct: 189 LLSYRAYWSDTLITLL--VEHQKEITIDEISSMTSMTTTDILHTAKTLNILRYYKG---Q 243
Query: 517 PCIVINWAIVDAHMKRLEQSKTRIKIDPECLRWTP 551
I +N I+D + RL ++K R IDP L W P
Sbjct: 244 HIIFLNEDILDRY-NRL-KAKKRRTIDPNRLIWKP 276
>pdb|3TO9|A Chain A, Crystal Structure Of Yeast Esa1 E338q Hat Domain Bound To
Coenzyme A With Active Site Lysine Acetylated
Length = 276
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 137/275 (49%), Positives = 183/275 (66%), Gaps = 7/275 (2%)
Query: 277 NPAAIEFGQYEVKTWYSSPFPQEYARLPKLFLCEFCLKYTKSKAVLERHRDKCAWRHPPA 336
N I G+YE++ WY SP+P E +++ +F L+Y SK ER+R KC RHPP
Sbjct: 7 NLNRIIMGKYEIEPWYFSPYPIELTDEDFIYIDDFTLQYFGSKKQYERYRKKCTLRHPPG 66
Query: 337 TEIYRKENLSVFEVDGNQNKFYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDDKGCH 396
EIYR + +S FE+DG + + +C+NLCLL+KLFLDH TLYYDV+PFLFY +T+ D+ G H
Sbjct: 67 NEIYRDDYVSFFEIDGRKQRTWCRNLCLLSKLFLDHXTLYYDVDPFLFYCMTRRDELGHH 126
Query: 397 LVGYFSKEKHCQQKYNVSCIMTLPQYQRKGYGRFLIDFSYLLSKKEGQRGTPEKPLSDLG 456
LVGYFSKEK YNV+CI+TLPQYQR GYG+ LI+FSY LSKKE + G+P+KPLSDLG
Sbjct: 127 LVGYFSKEKESADGYNVACILTLPQYQRMGYGKLLIEFSYELSKKENKVGSPQKPLSDLG 186
Query: 457 RVSYHAYWKSVLLEYLDTIRNQKLICIDQMCADTGLYHHDVAETLELLGMLRTKHGDSSE 516
+SY AYW L+ L + +QK I ID++ + T + D+ T + L +LR G +
Sbjct: 187 LLSYRAYWSDTLITLL--VEHQKEITIDEISSMTSMTTTDILHTAKTLNILRYYKG---Q 241
Query: 517 PCIVINWAIVDAHMKRLEQSKTRIKIDPECLRWTP 551
I +N I+D + RL ++K R IDP L W P
Sbjct: 242 HIIFLNEDILDRY-NRL-KAKKRRTIDPNRLIWKP 274
>pdb|1MJB|A Chain A, Crystal Structure Of Yeast Esa1 Histone Acetyltransferase
E338q Mutant Complexed With Acetyl Coenzyme A
Length = 278
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 137/275 (49%), Positives = 183/275 (66%), Gaps = 7/275 (2%)
Query: 277 NPAAIEFGQYEVKTWYSSPFPQEYARLPKLFLCEFCLKYTKSKAVLERHRDKCAWRHPPA 336
N I G+YE++ WY SP+P E +++ +F L+Y SK ER+R KC RHPP
Sbjct: 9 NLNRIIMGKYEIEPWYFSPYPIELTDEDFIYIDDFTLQYFGSKKQYERYRKKCTLRHPPG 68
Query: 337 TEIYRKENLSVFEVDGNQNKFYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDDKGCH 396
EIYR + +S FE+DG + + +C+NLCLL+KLFLDHKTLYYDV+PFLFY +T+ D+ G H
Sbjct: 69 NEIYRDDYVSFFEIDGRKQRTWCRNLCLLSKLFLDHKTLYYDVDPFLFYCMTRRDELGHH 128
Query: 397 LVGYFSKEKHCQQKYNVSCIMTLPQYQRKGYGRFLIDFSYLLSKKEGQRGTPEKPLSDLG 456
LVGYFSKEK YNV+ I+TLPQYQR GYG+ LI+FSY LSKKE + G+P+KPLSDLG
Sbjct: 129 LVGYFSKEKESADGYNVAXILTLPQYQRMGYGKLLIEFSYELSKKENKVGSPQKPLSDLG 188
Query: 457 RVSYHAYWKSVLLEYLDTIRNQKLICIDQMCADTGLYHHDVAETLELLGMLRTKHGDSSE 516
+SY AYW L+ L + +QK I ID++ + T + D+ T + L +LR G +
Sbjct: 189 LLSYRAYWSDTLITLL--VEHQKEITIDEISSMTSMTTTDILHTAKTLNILRYYKG---Q 243
Query: 517 PCIVINWAIVDAHMKRLEQSKTRIKIDPECLRWTP 551
I +N I+D + RL ++K R IDP L W P
Sbjct: 244 HIIFLNEDILDRY-NRL-KAKKRRTIDPNRLIWKP 276
>pdb|1M36|A Chain A, Solution Structure Of A Cchc Zinc Finger From Moz
Length = 33
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 301 ARLPKLFLCEFCLKYTKSKAVLERHRDKCAW 331
+RLPKL+LCEFCLKY KS+ +L++H KC W
Sbjct: 2 SRLPKLYLCEFCLKYMKSRTILQQHMKKCGW 32
>pdb|2KFT|A Chain A, Nmr Solution Structure Of The First Phd Finger Domain Of
Human Autoimmune Regulator (Aire) In Complex With
Histone H3(1-20cys) Peptide
Length = 56
Score = 37.0 bits (84), Expect = 0.039, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 141 LIKCCACNVYYHIICLQPPLERRLKVPWKCTSCESGTTE 179
LI C C +H+ CL PPL W+C+SC T +
Sbjct: 17 LICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATVQ 55
>pdb|1XWH|A Chain A, Nmr Structure Of The First Phd Finger Of Autoimmune
Regulator Protein (Aire1): Insights Into Apeced
pdb|2KE1|A Chain A, Molecular Basis Of Non-Modified Histone H3 Tail
Recognition By The First Phd Finger Of Autoimmune
Regulator
Length = 66
Score = 36.6 bits (83), Expect = 0.049, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 141 LIKCCACNVYYHIICLQPPLERRLKVPWKCTSCESGTTE 179
LI C C +H+ CL PPL W+C+SC T +
Sbjct: 20 LICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATVQ 58
>pdb|2E6R|A Chain A, Solution Structure Of The Phd Domain In Smcy Protein
Length = 92
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 141 LIKCCACNVYYHIICLQPPLERRLKVPWKCTSC 173
L+ C C+ YHI CL PPL + W+C C
Sbjct: 31 LLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKC 63
>pdb|2YSM|A Chain A, Solution Structure Of The First And Second Phd Domain From
MyeloidLYMPHOID OR MIXED-Lineage Leukemia Protein 3
Homolog
Length = 111
Score = 34.7 bits (78), Expect = 0.21, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 141 LIKCCACNVYYHIICLQPPLERRLKVPWKCTSCESGTTEPS 181
++ C C+ YH CLQP ++ WKC +C + PS
Sbjct: 69 MLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRICISGPS 109
>pdb|2YQL|A Chain A, Solution Structure Of The Phd Domain In Phd Finger Protein
21a
Length = 56
Score = 34.3 bits (77), Expect = 0.23, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 141 LIKCCACNVYYHIICLQPPLERRLKVPWKCTSCE 174
L+ C C+ YH+ CL PPL+ K W C C+
Sbjct: 21 LLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 54
>pdb|2E6S|A Chain A, Solution Structure Of The Phd Domain In Ring Finger
Protein 107
Length = 77
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 7/33 (21%)
Query: 147 CNVYYHIICLQPPLERRLKVP----WKCTSCES 175
CNV YHI CL PPL+ KVP W C SC++
Sbjct: 47 CNVAYHIYCLNPPLD---KVPEEEYWYCPSCKT 76
>pdb|1EH5|A Chain A, Crystal Structure Of Palmitoyl Protein Thioesterase 1
Complexed With Palmitate
pdb|1EI9|A Chain A, Crystal Structure Of Palmitoyl Protein Thioesterase 1
pdb|1EXW|A Chain A, Crystal Structure Of Palmitoyl Protein Thioesterase 1
Complexed With Hexadecylsulfonyl Fluoride
Length = 279
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 15/91 (16%)
Query: 308 LCEFCLKYTKS----KAVLERHRDKCAWRHPPATEIYRKENLSVFEVDGNQ----NKFYC 359
+C+F K + KA+ ER W P +IYR N S+F D NQ N+ Y
Sbjct: 132 ICDFIRKTLNAGAYNKAIQERLVQAEYWHDPIREDIYR--NHSIFLADINQERGVNESYK 189
Query: 360 QNLCLLAKL----FLDHKTLY-YDVEPFLFY 385
+NL L K FL+ + D E F FY
Sbjct: 190 KNLMALKKFVMVKFLNDTIVDPVDSEWFGFY 220
>pdb|2L5U|A Chain A, Structure Of The First Phd Finger (Phd1) From Chd4 (Mi2b)
Length = 61
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 141 LIKCCACNVYYHIICLQPPLERRLKVPWKCTSCE 174
+I C C YH++CL P +E+ + W C CE
Sbjct: 23 IILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 56
>pdb|1MM2|A Chain A, Solution Structure Of The 2nd Phd Domain From Mi2b
pdb|2L75|A Chain A, Solution Structure Of Chd4-Phd2 In Complex With H3k9me3
Length = 61
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 15/33 (45%)
Query: 141 LIKCCACNVYYHIICLQPPLERRLKVPWKCTSC 173
L+ C C YHI CL PPL W C C
Sbjct: 21 LLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 53
>pdb|3ASK|A Chain A, Structure Of Uhrf1 In Complex With Histone Tail
pdb|3ASK|B Chain B, Structure Of Uhrf1 In Complex With Histone Tail
pdb|3ASK|C Chain C, Structure Of Uhrf1 In Complex With Histone Tail
pdb|3ASK|D Chain D, Structure Of Uhrf1 In Complex With Histone Tail
Length = 226
Score = 30.8 bits (68), Expect = 3.1, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 7/38 (18%)
Query: 142 IKCCACNVYYHIICLQPPLERRLKVP----WKCTSCES 175
+ C C++ +HI CL PPL VP W C C +
Sbjct: 190 LMCDECDMAFHIYCLDPPLS---SVPSEDEWYCPECRN 224
>pdb|1F62|A Chain A, Wstf-Phd
Length = 51
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 141 LIKCCACNVYYHIICLQPPLERRLKVPWKCTSCESGT 177
LI C CN +H+ CL+P L W+C +C+ T
Sbjct: 15 LILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPAT 51
>pdb|4GY5|A Chain A, Crystal Structure Of The Tandem Tudor Domain And Plant
Homeodomain Of Uhrf1 With Histone H3k9me3
pdb|4GY5|B Chain B, Crystal Structure Of The Tandem Tudor Domain And Plant
Homeodomain Of Uhrf1 With Histone H3k9me3
pdb|4GY5|C Chain C, Crystal Structure Of The Tandem Tudor Domain And Plant
Homeodomain Of Uhrf1 With Histone H3k9me3
pdb|4GY5|D Chain D, Crystal Structure Of The Tandem Tudor Domain And Plant
Homeodomain Of Uhrf1 With Histone H3k9me3
Length = 241
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 7/38 (18%)
Query: 142 IKCCACNVYYHIICLQPPLERRLKVP----WKCTSCES 175
+ C C++ +HI CL PPL VP W C C +
Sbjct: 206 LMCDECDMAFHIYCLDPPLS---SVPSEDEWYCPECRN 240
>pdb|3V43|A Chain A, Crystal Structure Of Moz
Length = 112
Score = 30.4 bits (67), Expect = 4.2, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 141 LIKCCACNVYYHIICLQPPLERRLKVPWKCTSC 173
++ C +C+ +H+ C PPL R K W C C
Sbjct: 77 MLFCDSCDRGFHMECCDPPLTRMPKGMWICQIC 109
>pdb|2LN0|A Chain A, Structure Of Moz
Length = 110
Score = 30.4 bits (67), Expect = 4.3, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 141 LIKCCACNVYYHIICLQPPLERRLKVPWKCTSC 173
++ C +C+ +H+ C PPL R K W C C
Sbjct: 75 MLFCDSCDRGFHMECCDPPLTRMPKGMWICQIC 107
>pdb|3ZVZ|B Chain B, Phd Finger Of Human Uhrf1
Length = 57
Score = 30.0 bits (66), Expect = 5.5, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 7/38 (18%)
Query: 142 IKCCACNVYYHIICLQPPLERRLKVP----WKCTSCES 175
+ C C++ +HI CL PPL VP W C C +
Sbjct: 21 LMCDECDMAFHIYCLDPPLS---SVPSEDEWYCPECRN 55
>pdb|3SHB|A Chain A, Crystal Structure Of Phd Domain Of Uhrf1
Length = 77
Score = 29.3 bits (64), Expect = 7.7, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 7/38 (18%)
Query: 142 IKCCACNVYYHIICLQPPLERRLKVP----WKCTSCES 175
+ C C++ +HI CL PPL VP W C C +
Sbjct: 42 LMCDECDMAFHIYCLDPPLS---SVPSEDEWYCPECRN 76
>pdb|3SOU|A Chain A, Structure Of Uhrf1 Phd Finger In Complex With Histone H3
1-9 Peptide
pdb|3SOU|B Chain B, Structure Of Uhrf1 Phd Finger In Complex With Histone H3
1-9 Peptide
pdb|3SOW|A Chain A, Structure Of Uhrf1 Phd Finger In Complex With Histone
H3k4me3 1-9 Peptide
pdb|3SOW|B Chain B, Structure Of Uhrf1 Phd Finger In Complex With Histone
H3k4me3 1-9 Peptide
pdb|3SOX|A Chain A, Structure Of Uhrf1 Phd Finger In The Free Form
pdb|3SOX|B Chain B, Structure Of Uhrf1 Phd Finger In The Free Form
pdb|3ASL|A Chain A, Structure Of Uhrf1 In Complex With Histone Tail
Length = 70
Score = 29.3 bits (64), Expect = 7.7, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 7/38 (18%)
Query: 142 IKCCACNVYYHIICLQPPLERRLKVP----WKCTSCES 175
+ C C++ +HI CL PPL VP W C C +
Sbjct: 34 LMCDECDMAFHIYCLDPPLS---SVPSEDEWYCPECRN 68
>pdb|2LGG|A Chain A, Structure Of Phd Domain Of Uhrf1 In Complex With H3
Peptide
pdb|2LGK|A Chain A, Nmr Structure Of Uhrf1 Phd Domains In A Complex With
Histone H3 Peptide
pdb|2LGL|A Chain A, Nmr Structure Of The Uhrf1 Phd Domain
Length = 69
Score = 29.3 bits (64), Expect = 7.9, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 7/38 (18%)
Query: 142 IKCCACNVYYHIICLQPPLERRLKVP----WKCTSCES 175
+ C C++ +HI CL PPL VP W C C +
Sbjct: 34 LMCDECDMAFHIYCLDPPLS---SVPSEDEWYCPECRN 68
>pdb|2PUY|A Chain A, Crystal Structure Of The Bhc80 Phd Finger
pdb|2PUY|B Chain B, Crystal Structure Of The Bhc80 Phd Finger
Length = 60
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 141 LIKCCACNVYYHIICLQPPLERRLKVPWKCTSCES 175
L+ C C+ YH+ CL PPL+ K W C C+
Sbjct: 17 LLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 51
>pdb|3ZVY|A Chain A, Phd Finger Of Human Uhrf1 In Complex With Unmodified
Histone H3 N-Terminal Tail
pdb|3ZVY|B Chain B, Phd Finger Of Human Uhrf1 In Complex With Unmodified
Histone H3 N-Terminal Tail
Length = 72
Score = 29.3 bits (64), Expect = 8.5, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 7/38 (18%)
Query: 142 IKCCACNVYYHIICLQPPLERRLKVP----WKCTSCES 175
+ C C++ +HI CL PPL VP W C C +
Sbjct: 36 LMCDECDMAFHIYCLDPPLS---SVPSEDEWYCPECRN 70
>pdb|3DGH|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
pdb|3DGH|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
Length = 483
Score = 29.3 bits (64), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 236 KLLATDLAPGVTRKDIDLYKQAHEEATKATPLLPLAVPEQINPAAIEFGQYEVKTWYSSP 295
+LLA L G T++ +D YK T TPL V A +FG E++ ++
Sbjct: 343 RLLARRLYGGSTQR-MD-YKDV--ATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYY 398
Query: 296 FPQEYARLPKLFLCEFCLKYTKSKAVLERHRDK 328
P E+ F+ + ++Y KAV ERH D+
Sbjct: 399 KPTEF------FIPQKSVRYCYLKAVAERHGDQ 425
>pdb|3DH9|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
pdb|3DH9|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
Length = 482
Score = 29.3 bits (64), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 236 KLLATDLAPGVTRKDIDLYKQAHEEATKATPLLPLAVPEQINPAAIEFGQYEVKTWYSSP 295
+LLA L G T++ +D YK T TPL V A +FG E++ ++
Sbjct: 339 RLLARRLYGGSTQR-MD-YKDV--ATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYY 394
Query: 296 FPQEYARLPKLFLCEFCLKYTKSKAVLERHRDK 328
P E+ F+ + ++Y KAV ERH D+
Sbjct: 395 KPTEF------FIPQKSVRYCYLKAVAERHGDQ 421
>pdb|3T6R|A Chain A, Structure Of Uhrf1 In Complex With Unmodified H3
N-Terminal Tail
pdb|3T6R|B Chain B, Structure Of Uhrf1 In Complex With Unmodified H3
N-Terminal Tail
Length = 72
Score = 29.3 bits (64), Expect = 9.0, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 7/36 (19%)
Query: 142 IKCCACNVYYHIICLQPPLERRLKVP----WKCTSC 173
+ C C++ +HI CL PPL VP W C C
Sbjct: 39 LMCDECDMAFHIYCLDPPLS---SVPSEDEWYCPEC 71
>pdb|2NVK|X Chain X, Crystal Structure Of Thioredoxin Reductase From Drosophila
Melanogaster
Length = 488
Score = 29.3 bits (64), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 236 KLLATDLAPGVTRKDIDLYKQAHEEATKATPLLPLAVPEQINPAAIEFGQYEVKTWYSSP 295
+LLA L G T++ +D YK T TPL V A +FG E++ ++
Sbjct: 343 RLLARRLYGGSTQR-MD-YKDV--ATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYY 398
Query: 296 FPQEYARLPKLFLCEFCLKYTKSKAVLERHRDK 328
P E+ F+ + ++Y KAV ERH D+
Sbjct: 399 KPTEF------FIPQKSVRYCYLKAVAERHGDQ 425
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,902,648
Number of Sequences: 62578
Number of extensions: 778505
Number of successful extensions: 1505
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1435
Number of HSP's gapped (non-prelim): 69
length of query: 760
length of database: 14,973,337
effective HSP length: 106
effective length of query: 654
effective length of database: 8,340,069
effective search space: 5454405126
effective search space used: 5454405126
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)