RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy6980
(760 letters)
>d2ozua1 d.108.1.1 (A:507-776) Histone acetyltransferase MYST3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 270
Score = 418 bits (1075), Expect = e-143
Identities = 182/273 (66%), Positives = 215/273 (78%), Gaps = 4/273 (1%)
Query: 277 NPAAIEFGQYEVKTWYSSPFPQEYARLPKLFLCEFCLKYTKSKAVLERHRDKCAWRHPPA 336
P+ IEFG+YE+ TWYSSP+PQEY+RLPKL+LCEFCLKY KS+ +L++H KC W HPPA
Sbjct: 2 CPSVIEFGKYEIHTWYSSPYPQEYSRLPKLYLCEFCLKYMKSRTILQQHMKKCGWFHPPA 61
Query: 337 TEIYRKENLSVFEVDGNQNKFYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDDKGCH 396
EIYRK N+SVFEVDGN + YCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQND KGCH
Sbjct: 62 NEIYRKNNISVFEVDGNVSTIYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDVKGCH 121
Query: 397 LVGYFSKEKHCQQKYNVSCIMTLPQYQRKGYGRFLIDFSYLLSKKEGQRGTPEKPLSDLG 456
LVGYFSKEKHCQQKYNVSCIM LPQYQRKGYGRFLIDFSYLLSK+EGQ G+PEKPLSDLG
Sbjct: 122 LVGYFSKEKHCQQKYNVSCIMILPQYQRKGYGRFLIDFSYLLSKREGQAGSPEKPLSDLG 181
Query: 457 RVSYHAYWKSVLLEYLDTIRNQKLICIDQMCADTGLYHHDVAETLELLGMLRTKHGDSSE 516
R+SY AYWKSV+LE L +++ I I ++ TG+ D+ TL L ML + +
Sbjct: 182 RLSYMAYWKSVILECLYHQNDKQ-ISIKKLSKLTGICPQDITSTLHHLRMLDFRSD---Q 237
Query: 517 PCIVINWAIVDAHMKRLEQSKTRIKIDPECLRW 549
I+ ++ HM +L+ + + +DPECLRW
Sbjct: 238 FVIIRREKLIQDHMAKLQLNLRPVDVDPECLRW 270
Score = 52.9 bits (127), Expect = 5e-08
Identities = 18/30 (60%), Positives = 25/30 (83%)
Query: 55 NPAAIEFGQYEVKTWYSSPFPQEYARNTQV 84
P+ IEFG+YE+ TWYSSP+PQEY+R ++
Sbjct: 2 CPSVIEFGKYEIHTWYSSPYPQEYSRLPKL 31
>d2giva1 d.108.1.1 (A:4-274) Probable histone acetyltransferase
MYST1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 271
Score = 414 bits (1067), Expect = e-141
Identities = 142/271 (52%), Positives = 182/271 (67%), Gaps = 5/271 (1%)
Query: 281 IEFGQYEVKTWYSSPFPQEYARLPKLFLCEFCLKYTKSKAVLERHRDKCAWRHPPATEIY 340
I G YE+ WY SPFP++Y + PKL+LCE+CLKY K + H +C WR PP EIY
Sbjct: 6 IHIGNYEIDAWYFSPFPEDYGKQPKLWLCEYCLKYMKYEKSYRFHLGQCQWRQPPGKEIY 65
Query: 341 RKENLSVFEVDGNQNKFYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDDKGCHLVGY 400
RK N+SV EVDG +K YCQNLCLLAKLFLDHKTLY+DVEPF+FY+LT+ D +G H+VGY
Sbjct: 66 RKSNISVHEVDGKDHKIYCQNLCLLAKLFLDHKTLYFDVEPFVFYILTEVDRQGAHIVGY 125
Query: 401 FSKEKHCQQKYNVSCIMTLPQYQRKGYGRFLIDFSYLLSKKEGQRGTPEKPLSDLGRVSY 460
FSKEK NV+CI+TLP YQR+GYG+FLI FSY LSK E G+PEKPLSDLG++SY
Sbjct: 126 FSKEKESPDGNNVACILTLPPYQRRGYGKFLIAFSYELSKLESTVGSPEKPLSDLGKLSY 185
Query: 461 HAYWKSVLLEYLDTIRNQKLICIDQMCADTGLYHHDVAETLELLGMLRTKHGDSSEPCIV 520
+YW VLLE L R + I + T + +D+ TL+ L M++ G + I
Sbjct: 186 RSYWSWVLLENLRDFRGT--LSIKDLSQMTSITQNDIISTLQSLNMVKYWKG---QHVIC 240
Query: 521 INWAIVDAHMKRLEQSKTRIKIDPECLRWTP 551
+ +V+ H+K + K I +D CL+W P
Sbjct: 241 VTPKLVEEHLKSAQYKKPPITVDSVCLKWAP 271
Score = 47.5 bits (113), Expect = 3e-06
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 59 IEFGQYEVKTWYSSPFPQEYARN 81
I G YE+ WY SPFP++Y +
Sbjct: 6 IHIGNYEIDAWYFSPFPEDYGKQ 28
>d1fy7a_ d.108.1.1 (A:) Histone acetyltransferase ESA1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 273
Score = 402 bits (1035), Expect = e-136
Identities = 134/275 (48%), Positives = 180/275 (65%), Gaps = 7/275 (2%)
Query: 277 NPAAIEFGQYEVKTWYSSPFPQEYARLPKLFLCEFCLKYTKSKAVLERHRDKCAWRHPPA 336
N I G+YE++ WY SP+P E +++ +F L+Y SK ER+R KC RHPP
Sbjct: 5 NLNRIIMGKYEIEPWYFSPYPIELTDEDFIYIDDFTLQYFGSKKQYERYRKKCTLRHPPG 64
Query: 337 TEIYRKENLSVFEVDGNQNKFYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDDKGCH 396
EIYR + +S FE+DG + + +C+NLCLL+KLFLDHKTLYYDV+PFLFY +T+ D+ G H
Sbjct: 65 NEIYRDDYVSFFEIDGRKQRTWCRNLCLLSKLFLDHKTLYYDVDPFLFYCMTRRDELGHH 124
Query: 397 LVGYFSKEKHCQQKYNVSCIMTLPQYQRKGYGRFLIDFSYLLSKKEGQRGTPEKPLSDLG 456
LVGYFSKEK YNV+CI+TLPQYQR GYG+ LI+FSY LSKKE + G+PEKPLSDLG
Sbjct: 125 LVGYFSKEKESADGYNVACILTLPQYQRMGYGKLLIEFSYELSKKENKVGSPEKPLSDLG 184
Query: 457 RVSYHAYWKSVLLEYLDTIRNQKLICIDQMCADTGLYHHDVAETLELLGMLRTKHGDSSE 516
+SY AYW L+ L + + I ID++ + T + D+ T + L +LR +
Sbjct: 185 LLSYRAYWSDTLITLLVEHQKE--ITIDEISSMTSMTTTDILHTAKTLNILRY---YKGQ 239
Query: 517 PCIVINWAIVDAHMKRLEQSKTRIKIDPECLRWTP 551
I +N I+D + + ++K R IDP L W P
Sbjct: 240 HIIFLNEDILDRYNR--LKAKKRRTIDPNRLIWKP 272
Score = 46.7 bits (111), Expect = 4e-06
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 55 NPAAIEFGQYEVKTWYSSPFPQEYARN 81
N I G+YE++ WY SP+P E
Sbjct: 5 NLNRIIMGKYEIEPWYFSPYPIELTDE 31
>d1boba_ d.108.1.1 (A:) Histone acetyltransferase HAT1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 315
Score = 107 bits (268), Expect = 4e-26
Identities = 30/177 (16%), Positives = 58/177 (32%), Gaps = 34/177 (19%)
Query: 343 ENLSVFEVDGNQNKF--YCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDDKGCHLVGY 400
E V++ + + + + + LF++ Y D + + + K L+G+
Sbjct: 127 EEFVVYKSSLVDDFARRMHRRVQIFSLLFIEAAN-YIDETDPSWQIYWLLNKKTKELIGF 185
Query: 401 --------------FSKEKHCQQKYNVSCIMTLPQYQRKGYGRFLIDFSY--LLSKKEGQ 444
F ++ + + +S + P YQ KG+G L + L K
Sbjct: 186 VTTYKYWHYLGAKSFDEDIDKKFRAKISQFLIFPPYQNKGHGSCLYEAIIQSWLEDKSIT 245
Query: 445 RGTPEKP---------------LSDLGRVSYHAYWKSVLLEYLDTIRNQKLICIDQM 486
T E P L LG + + E+L++ R + Q
Sbjct: 246 EITVEDPNEAFDDLRDRNDIQRLRKLGYDAVFQKHSDLSDEFLESSRKSLKLEERQF 302
>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz
{Human (Homo sapiens) [TaxId: 9606]}
Length = 33
Score = 63.6 bits (155), Expect = 8e-14
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 301 ARLPKLFLCEFCLKYTKSKAVLERHRDKCAW 331
+RLPKL+LCEFCLKY KS+ +L++H KC W
Sbjct: 2 SRLPKLYLCEFCLKYMKSRTILQQHMKKCGW 32
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription
factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Length = 51
Score = 43.0 bits (101), Expect = 2e-06
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 141 LIKCCACNVYYHIICLQPPLERRLKVPWKCTSCESGT 177
LI C CN +H+ CL+P L W+C +C+ T
Sbjct: 15 LILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPAT 51
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 72
Score = 41.2 bits (96), Expect = 2e-05
Identities = 9/42 (21%), Positives = 16/42 (38%)
Query: 140 CLIKCCACNVYYHIICLQPPLERRLKVPWKCTSCESGTTEPS 181
++ C C V++H C+ L + C C + S
Sbjct: 30 RMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIELSGPSS 71
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 70
Score = 39.6 bits (92), Expect = 6e-05
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 141 LIKCCACNVYYHIICLQPPLERRLKVPWKCTSCE 174
L+ C C +H+ C P L+ W C+ C
Sbjct: 19 LVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCH 52
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId:
9606]}
Length = 61
Score = 37.2 bits (86), Expect = 3e-04
Identities = 14/35 (40%), Positives = 15/35 (42%)
Query: 141 LIKCCACNVYYHIICLQPPLERRLKVPWKCTSCES 175
L+ C C YHI CL PPL W C C
Sbjct: 21 LLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTC 55
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 88
Score = 37.9 bits (87), Expect = 4e-04
Identities = 11/52 (21%), Positives = 18/52 (34%), Gaps = 4/52 (7%)
Query: 141 LIKCCACNVYYHIICLQPPLERRLKVP----WKCTSCESGTTEPSPAKTSPG 188
L++C C+ YH C +P + + W C C + G
Sbjct: 33 LVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMKRMAQKNQKSG 84
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 64
Score = 36.9 bits (85), Expect = 5e-04
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 141 LIKCCACNVYYHIICLQPPLERRLKV-PWKCTSCES 175
I C C +++H C++ R + +KC SC +
Sbjct: 22 WICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSN 57
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1,
Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]}
Length = 76
Score = 32.7 bits (74), Expect = 0.019
Identities = 10/46 (21%), Positives = 18/46 (39%), Gaps = 5/46 (10%)
Query: 141 LIKCCACNVYYHIICL-----QPPLERRLKVPWKCTSCESGTTEPS 181
+I C C ++H C+ + L R + C +C + S
Sbjct: 30 MICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILSGPSS 75
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 79
Score = 31.6 bits (71), Expect = 0.054
Identities = 10/54 (18%), Positives = 18/54 (33%), Gaps = 4/54 (7%)
Query: 141 LIKCCACNVYYHIICLQPPLER-RLKVPWKCTSCESGTTEPSPAKTSPGRARAS 193
+I+C C ++H C+ E + C C P+ + S
Sbjct: 27 MIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDC---EAVFGPSIMKNWHSGPS 77
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 78
Score = 28.9 bits (64), Expect = 0.45
Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
Query: 142 IKCCACNVYYHIICL---QPPLERRLKVP--WKCTSCESGTTEPSPA 183
+ C+V+ H+ C+ P++ +P + C C T+ PS
Sbjct: 33 CEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEIC-RLTSGPSSG 78
>d1rgva_ d.58.1.1 (A:) Ferredoxin II {Thauera aromatica [TaxId:
59405]}
Length = 80
Score = 27.8 bits (61), Expect = 1.2
Identities = 18/75 (24%), Positives = 26/75 (34%), Gaps = 4/75 (5%)
Query: 138 EVCLIKCCACNVYYHIICLQPPLERRLKVPWKCTSCESGTTEPSPAKTSPGRARASLTTS 197
+ C C AC + P + P KC+ C EP P
Sbjct: 6 DDC-TACDACVEECPNEAITPGDPIYVIDPTKCSECVGAFDEPQCRLVCPADCI-PDNPD 63
Query: 198 FRERKKQL--KQQRL 210
+RE +++L K RL
Sbjct: 64 YRETREELQEKYDRL 78
>d2gana1 d.108.1.1 (A:1-182) Hypothetical protein PH0736 {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 182
Score = 27.9 bits (61), Expect = 3.1
Identities = 11/81 (13%), Positives = 27/81 (33%), Gaps = 11/81 (13%)
Query: 376 YYDVEPFLFYVLTQNDDKGCHLVGYFSKEKHCQQKYN-----------VSCIMTLPQYQR 424
E Y +++ + + + K + + + P++Q
Sbjct: 61 RLSQEFDELYTYQKDNRIIGTIALVYKRIKEKGIWWVPEELMNEKVGLIEFFVVDPEFQG 120
Query: 425 KGYGRFLIDFSYLLSKKEGQR 445
KG G L++F+ + G+
Sbjct: 121 KGIGSTLLEFAVKRLRSLGKD 141
>d1vdka_ a.127.1.1 (A:) Fumarase {Thermus thermophilus [TaxId: 274]}
Length = 460
Score = 27.8 bits (61), Expect = 4.8
Identities = 7/29 (24%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Query: 13 SKLLATDLAPGVTRKDI-DLYKQAHEEAT 40
+ +LAT L + ++ K+A +E
Sbjct: 402 NPMLATALNKAIGYDKAAEIVKKALKEKK 430
Score = 27.8 bits (61), Expect = 4.8
Identities = 7/29 (24%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Query: 86 SKLLATDLAPGVTRKDI-DLYKQAHEEAT 113
+ +LAT L + ++ K+A +E
Sbjct: 402 NPMLATALNKAIGYDKAAEIVKKALKEKK 430
Score = 27.8 bits (61), Expect = 4.8
Identities = 7/29 (24%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Query: 235 SKLLATDLAPGVTRKDI-DLYKQAHEEAT 262
+ +LAT L + ++ K+A +E
Sbjct: 402 NPMLATALNKAIGYDKAAEIVKKALKEKK 430
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain
{Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8
[TaxId: 37296]}
Length = 60
Score = 25.2 bits (54), Expect = 6.5
Identities = 9/41 (21%), Positives = 9/41 (21%), Gaps = 2/41 (4%)
Query: 133 EFGQYEVCLIKCCACNVYYHIICLQPPLERRLKVPWKCTSC 173
E G C H CL L C C
Sbjct: 15 ELGNERFRACGCTGELENVHRSCLSTWLTIS--RNTACQIC 53
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.129 0.381
Gapped
Lambda K H
0.267 0.0636 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,701,577
Number of extensions: 126082
Number of successful extensions: 276
Number of sequences better than 10.0: 1
Number of HSP's gapped: 266
Number of HSP's successfully gapped: 25
Length of query: 760
Length of database: 2,407,596
Length adjustment: 92
Effective length of query: 668
Effective length of database: 1,144,436
Effective search space: 764483248
Effective search space used: 764483248
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (25.9 bits)