BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6982
(222 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9GUM2|BRE4_CAEEL Beta-1,4-N-acetylgalactosaminyltransferase bre-4 OS=Caenorhabditis
elegans GN=bre-4 PE=1 SV=1
Length = 383
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
Query: 86 QFCPVVPPNLQGALKIHKRYRSLNQIEKELAPLELEPGGSHRPKSCIALFRVAIIVPYRD 145
QFC PP+L G +++ +EK + P + GG PK C+A RVAIIVPYRD
Sbjct: 101 QFCNQTPPHLVGPIRVFLDEPDFKTLEK-IYP-DTHAGGHGMPKDCVARHRVAIIVPYRD 158
Query: 146 RKPHLHLLLYNLHPMLVRQQIDYTIFIIEQASNR 179
R+ HL ++L+NLH +L +QQ+DY IFI+EQ +N+
Sbjct: 159 REAHLRIMLHNLHSLLAKQQLDYAIFIVEQVANQ 192
>sp|A8Y1P7|BRE4_CAEBR Beta-1,4-N-acetylgalactosaminyltransferase bre-4 OS=Caenorhabditis
briggsae GN=bre-4 PE=3 SV=1
Length = 384
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
Query: 88 CPVVPPNLQGALKIHKRYRSLNQIEKELAPLELEPGGSHRPKSCIALFRVAIIVPYRDRK 147
C PP+L G +++ +EK + P E PGG P C+A RVAIIVPYRDR+
Sbjct: 104 CNQTPPHLVGPIRVFLDEPDFATLEK-IYP-ETHPGGHGIPTECVARHRVAIIVPYRDRE 161
Query: 148 PHLHLLLYNLHPMLVRQQIDYTIFIIEQASNR 179
HL ++L+NLH +L +QQ+DY IF++EQ +N+
Sbjct: 162 AHLRIMLHNLHSLLAKQQLDYAIFVVEQVANQ 193
>sp|O60513|B4GT4_HUMAN Beta-1,4-galactosyltransferase 4 OS=Homo sapiens GN=B4GALT4 PE=1
SV=1
Length = 344
Score = 80.9 bits (198), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 79/142 (55%), Gaps = 7/142 (4%)
Query: 42 THNFYMHPFLTSINYTSPFMSSSIMYFNLTVQRNMDNTSTTGIAQF--CPVVPPNLQGAL 99
T N+++ + I FM++ L + + N ++T + CP V P L+G
Sbjct: 30 TSNYFVGA-IQEIPKAKEFMANFHKTLILGKGKTLTNEASTKKVELDNCPSVSPYLRGQS 88
Query: 100 K-IHKRYRSLNQIEKELAPLELEPGGSHRPKSCIALFRVAIIVPYRDRKPHLHLLLYNLH 158
K I K +L +++ E + G +RP+ C AL RVAI+VP+R+R+ HL LL +LH
Sbjct: 89 KLIFKPDLTLEEVQAENPKVSR---GRYRPQECKALQRVAILVPHRNREKHLMYLLEHLH 145
Query: 159 PMLVRQQIDYTIFIIEQASNRK 180
P L RQQ+DY I++I QA +K
Sbjct: 146 PFLQRQQLDYGIYVIHQAEGKK 167
>sp|Q9JJ04|B4GT4_MOUSE Beta-1,4-galactosyltransferase 4 OS=Mus musculus GN=B4galt4 PE=2
SV=1
Length = 344
Score = 80.5 bits (197), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 6/124 (4%)
Query: 60 FMSSSIMYFNLTVQRNMDNTSTTGIAQF--CPVVPPNLQGALK-IHKRYRSLNQIEKELA 116
FM+S +L + + + T + CP V PNL+G K + K +L +IE E
Sbjct: 47 FMASFHKVIHLGNEETLGHDGATKKPELANCPSVSPNLRGQSKLVFKPDLTLEEIEAENP 106
Query: 117 PLELEPGGSHRPKSCIALFRVAIIVPYRDRKPHLHLLLYNLHPMLVRQQIDYTIFIIEQA 176
+ G + P+ C AL RVAI++P+R+R+ HL LL +LHP L RQQ+DY I+II Q
Sbjct: 107 KVSR---GRYHPEECKALQRVAILIPHRNREKHLIYLLEHLHPFLQRQQLDYGIYIIHQT 163
Query: 177 SNRK 180
++K
Sbjct: 164 GSKK 167
>sp|Q80WN7|B4GT4_CRIGR Beta-1,4-galactosyltransferase 4 OS=Cricetulus griseus GN=B4GALT4
PE=2 SV=1
Length = 344
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 80/142 (56%), Gaps = 7/142 (4%)
Query: 42 THNFYMHPFLTSINYTSPFMSSSIMYFNLTVQRNMDNTSTTGIAQF--CPVVPPNLQGAL 99
T N+++ P + I FM+S L + + + +T + CP V PNL+G
Sbjct: 30 TSNYFVDP-IQVIPKAKVFMASFYKVIPLGKEETLVHDATMEKVELGNCPSVSPNLRGQS 88
Query: 100 K-IHKRYRSLNQIEKELAPLELEPGGSHRPKSCIALFRVAIIVPYRDRKPHLHLLLYNLH 158
K I + +L +++ + + GG + P+ C A+ RVA+++P+R+R+ HL LL +LH
Sbjct: 89 KLIFEPDLTLEEVQAKNPKVS---GGRYHPEECKAVQRVAVLIPHRNREKHLTYLLEHLH 145
Query: 159 PMLVRQQIDYTIFIIEQASNRK 180
P L RQQ+DY I+II Q ++K
Sbjct: 146 PFLQRQQLDYGIYIIHQTGSKK 167
>sp|Q66HH1|B4GT4_RAT Beta-1,4-galactosyltransferase 4 OS=Rattus norvegicus GN=B4galt4
PE=2 SV=1
Length = 344
Score = 77.0 bits (188), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
Query: 88 CPVVPPNLQGALK-IHKRYRSLNQIEKELAPLELEPGGSHRPKSCIALFRVAIIVPYRDR 146
CP V PNL+G K + K +L +++ + + G +RP+ C AL RVA+++P+R+R
Sbjct: 77 CPSVSPNLRGQNKLVFKPDLTLEEVQAKNPKVSR---GRYRPEECKALQRVAVLIPHRNR 133
Query: 147 KPHLHLLLYNLHPMLVRQQIDYTIFIIEQASNRK 180
+ HL LL +LHP L RQQ+DY I++I Q ++K
Sbjct: 134 EKHLIYLLEHLHPFLQRQQLDYGIYVIHQTGSKK 167
>sp|Q09323|BAGT_LYMST Beta-N-acetyl-D-glucosaminide
beta-1,4-N-acetylglucosaminyl-transferase OS=Lymnaea
stagnalis GN=GNT PE=2 SV=1
Length = 490
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 88 CPVVPPNLQGALKIHKRYRSLNQIEKELAPLELEPGGSHRPKSCIALFRVAIIVPYRDRK 147
CP+ PP L G K+ + +++ +++ GG + P+ C + AII+PYR+R
Sbjct: 143 CPIRPPALAGRFVPSKKSSTYHELAAMFP--DVQDGGHYTPRMCTPAEKTAIIIPYRNRC 200
Query: 148 PHLHLLLYNLHPMLVRQQIDYTIFIIEQAS 177
HL+ LL NL PML+RQ +D+TIF+IEQ +
Sbjct: 201 RHLYTLLPNLIPMLMRQNVDFTIFVIEQTT 230
>sp|P15535|B4GT1_MOUSE Beta-1,4-galactosyltransferase 1 OS=Mus musculus GN=B4galt1 PE=2
SV=1
Length = 399
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 80 STTGIAQF--CPVVPPNLQGALKIHKRYRSLNQIEKELAPLELEPGGSHRPKSCIALFRV 137
+TTG+ CP P L G + I ++ + P E++ GG + PK C++ +V
Sbjct: 121 TTTGLLSLPACPEESPLLVGPMLIDFNIAVDLELLAKKNP-EIKTGGRYSPKDCVSPHKV 179
Query: 138 AIIVPYRDRKPHLHLLLYNLHPMLVRQQIDYTIFIIEQASN 178
AII+P+R+R+ HL LY LHP+L RQQ+DY I++I QA +
Sbjct: 180 AIIIPFRNRQEHLKYWLYYLHPILQRQQLDYGIYVINQAGD 220
>sp|P08037|B4GT1_BOVIN Beta-1,4-galactosyltransferase 1 OS=Bos taurus GN=B4GALT1 PE=1 SV=3
Length = 402
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
Query: 79 TSTTGIAQFCPVVPPNLQGALKIHKRYR-SLNQIEKELAPLELEPGGSHRPKSCIALFRV 137
++TT CP P L G + I L +E++ ++L GG + P CI+ +V
Sbjct: 125 STTTRSLTACPEESPLLVGPMLIEFNIPVDLKLVEQQNPKVKL--GGRYTPMDCISPHKV 182
Query: 138 AIIVPYRDRKPHLHLLLYNLHPMLVRQQIDYTIFIIEQAS 177
AII+P+R+R+ HL LY LHP+L RQQ+DY I++I QA
Sbjct: 183 AIIIPFRNRQEHLKYWLYYLHPILQRQQLDYGIYVINQAG 222
>sp|Q9UBX8|B4GT6_HUMAN Beta-1,4-galactosyltransferase 6 OS=Homo sapiens GN=B4GALT6 PE=1
SV=1
Length = 382
Score = 70.5 bits (171), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 88 CPVVPPNLQGALKIHKRYRSLNQIEKELA-PLELEPGGSHRPKSCIALFRVAIIVPYRDR 146
CP P ++G L ++ S ++I + + L++EPGG RPK C ++VA+++P+R+R
Sbjct: 108 CPEKLPYMRGFLNVNVSEVSFDEIHQLFSKDLDIEPGGHWRPKDCKPRWKVAVLIPFRNR 167
Query: 147 KPHLHLLLYNLHPMLVRQQIDYTIFIIEQASNR 179
HL + +L PML +Q++++ ++IEQ +
Sbjct: 168 HEHLPIFFLHLIPMLQKQRLEFAFYVIEQTGTQ 200
>sp|P15291|B4GT1_HUMAN Beta-1,4-galactosyltransferase 1 OS=Homo sapiens GN=B4GALT1 PE=1
SV=5
Length = 398
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 42/56 (75%)
Query: 123 GGSHRPKSCIALFRVAIIVPYRDRKPHLHLLLYNLHPMLVRQQIDYTIFIIEQASN 178
GG + P+ C++ +VAII+P+R+R+ HL LY LHP+L RQQ+DY I++I QA +
Sbjct: 164 GGRYAPRDCVSPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGD 219
>sp|O88419|B4GT6_RAT Beta-1,4-galactosyltransferase 6 OS=Rattus norvegicus GN=B4galt6
PE=1 SV=1
Length = 382
Score = 67.4 bits (163), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 88 CPVVPPNLQGALKIHKRYRSLNQIEKELA-PLELEPGGSHRPKSCIALFRVAIIVPYRDR 146
CP P ++G L ++ S +++ + + E+EPGG RP+ C ++VA+++P+R+R
Sbjct: 108 CPEKLPYMRGFLSVNVSEISFDEVHQLFSKDSEIEPGGHWRPQDCKPRWKVAVLIPFRNR 167
Query: 147 KPHLHLLLYNLHPMLVRQQIDYTIFIIEQASNR 179
HL + +L PML +Q++++ ++IEQ +
Sbjct: 168 HEHLPIFFLHLIPMLQKQRLEFAFYVIEQTGTQ 200
>sp|Q9WVK5|B4GT6_MOUSE Beta-1,4-galactosyltransferase 6 OS=Mus musculus GN=B4galt6 PE=2
SV=1
Length = 382
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 88 CPVVPPNLQGALKIHKRYRSLNQIEKELA-PLELEPGGSHRPKSCIALFRVAIIVPYRDR 146
CP P ++G L ++ S +++ + + E+ PGG RPK C ++VA+++P+R+R
Sbjct: 108 CPEKLPYMRGFLSVNVSEISFDEVHQLFSKDSEIGPGGHWRPKDCKPRWKVAVLIPFRNR 167
Query: 147 KPHLHLLLYNLHPMLVRQQIDYTIFIIEQASNR 179
HL + +L PML +Q++++ ++IEQ +
Sbjct: 168 HEHLPIFFLHLIPMLQKQRLEFAFYVIEQTGTQ 200
>sp|Q80WN9|B4GT2_CRIGR Beta-1,4-galactosyltransferase 2 OS=Cricetulus griseus GN=B4GALT2
PE=2 SV=1
Length = 369
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 88 CPVVPPNLQGALKIH-KRYRSLNQIEKELAPLELEPGGSHRPKSCIALFRVAIIVPYRDR 146
CP VPP L G + I L ++++E + L GG + P C VA+I+P+R R
Sbjct: 94 CPDVPPGLVGRVVIEFTSPMPLERVQRENPGVLL--GGRYTPPDCTPAQTVAVIIPFRHR 151
Query: 147 KPHLHLLLYNLHPMLVRQQIDYTIFIIEQ 175
+ HL L+ LHPML RQ++ Y I++I Q
Sbjct: 152 EHHLRYWLHYLHPMLRRQRLRYGIYVINQ 180
>sp|Q9Z2Y2|B4GT2_MOUSE Beta-1,4-galactosyltransferase 2 OS=Mus musculus GN=B4galt2 PE=2
SV=1
Length = 369
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 88 CPVVPPNLQGALKIH-KRYRSLNQIEKELAPLELEPGGSHRPKSCIALFRVAIIVPYRDR 146
CP VPP L G + I L ++++E + L GG + P C VA+I+P+R R
Sbjct: 94 CPDVPPGLVGRVVIEFTSPMPLERVQRENPGVLL--GGRYSPPDCTPAQTVAVIIPFRHR 151
Query: 147 KPHLHLLLYNLHPMLVRQQIDYTIFIIEQ 175
+ HL L+ LHPML RQ++ Y +++I Q
Sbjct: 152 EHHLRYWLHYLHPMLRRQRLRYGVYVINQ 180
>sp|Q9JMK0|B4GT5_MOUSE Beta-1,4-galactosyltransferase 5 OS=Mus musculus GN=B4galt5 PE=2
SV=2
Length = 388
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 88 CPVVPPNLQGALKIHKRYRSLNQIEKELA-PLELEPGGSHRPKSCIALFRVAIIVPYRDR 146
CP P+++G + I+ +++ I + + ++ GG +P C+ ++VAI++P+R+R
Sbjct: 114 CPERLPSMKGPIDINMSEIAMDDIHELFSRDPAIKLGGHWKPADCVPRWKVAILIPFRNR 173
Query: 147 KPHLHLLLYNLHPMLVRQQIDYTIFIIEQASNR 179
HL +LL +L PML RQ++ + ++IEQ +
Sbjct: 174 HEHLPVLLRHLLPMLQRQRLQFAFYVIEQVGTQ 206
>sp|O43286|B4GT5_HUMAN Beta-1,4-galactosyltransferase 5 OS=Homo sapiens GN=B4GALT5 PE=2
SV=1
Length = 388
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 88 CPVVPPNLQGALKIHKRYRSLNQIEKELA-PLELEPGGSHRPKSCIALFRVAIIVPYRDR 146
CP P+++G + I+ ++ I + + ++ GG +P C+ ++VAI++P+R+R
Sbjct: 114 CPERLPSMKGPIDINMSEIGMDYIHELFSKDPTIKLGGHWKPSDCMPRWKVAILIPFRNR 173
Query: 147 KPHLHLLLYNLHPMLVRQQIDYTIFIIEQASNR 179
HL +L +L PML RQ++ + +++EQ +
Sbjct: 174 HEHLPVLFRHLLPMLQRQRLQFAFYVVEQVGTQ 206
>sp|O60909|B4GT2_HUMAN Beta-1,4-galactosyltransferase 2 OS=Homo sapiens GN=B4GALT2 PE=1
SV=1
Length = 372
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 88 CPVVPPNLQGALKIH-KRYRSLNQIEKELAPLELEPGGSHRPKSCIALFRVAIIVPYRDR 146
CP PP L G L I L ++++E + + GG + P C VA+I+P+R R
Sbjct: 97 CPDSPPGLVGRLLIEFTSPMPLERVQRENPGVLM--GGRYTPPDCTPAQTVAVIIPFRHR 154
Query: 147 KPHLHLLLYNLHPMLVRQQIDYTIFIIEQ 175
+ HL L+ LHP+L RQ++ Y +++I Q
Sbjct: 155 EHHLRYWLHYLHPILRRQRLRYGVYVINQ 183
>sp|Q80WN8|B4GT3_CRIGR Beta-1,4-galactosyltransferase 3 OS=Cricetulus griseus GN=B4GALT3
PE=2 SV=1
Length = 395
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 57/93 (61%), Gaps = 3/93 (3%)
Query: 87 FCPVVPPNLQGALKIH-KRYRSLNQIEKELAPLELEPGGSHRPKSCIALFRVAIIVPYRD 145
FCP P L G + + SL +I E P +EPGG +RP C A R AIIVP+R
Sbjct: 78 FCPERSPFLVGPVSVSFSPVPSLAEI-VERNP-RVEPGGRYRPAGCEARSRTAIIVPHRA 135
Query: 146 RKPHLHLLLYNLHPMLVRQQIDYTIFIIEQASN 178
R+ HL LLLY+LHP L RQQ+ Y I++I QA N
Sbjct: 136 REHHLRLLLYHLHPFLQRQQLAYGIYVIHQAGN 168
>sp|Q5NVN3|B4GT3_PONAB Beta-1,4-galactosyltransferase 3 OS=Pongo abelii GN=B4GALT3 PE=2
SV=1
Length = 393
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Query: 87 FCPVVPPNLQGALKIH-KRYRSLNQIEKELAPLELEPGGSHRPKSCIALFRVAIIVPYRD 145
+CP P L G + + SL +I E P +EPGG +RP C R AIIVP+R
Sbjct: 76 YCPERSPLLVGPVSVSFSPVPSLAEI-VERNP-RVEPGGRYRPAGCEPRSRTAIIVPHRA 133
Query: 146 RKPHLHLLLYNLHPMLVRQQIDYTIFIIEQASN 178
R+ HL LLLY+LHP L RQQ+ Y I++I QA N
Sbjct: 134 REHHLRLLLYHLHPFLQRQQLAYGIYVIHQAGN 166
>sp|O60512|B4GT3_HUMAN Beta-1,4-galactosyltransferase 3 OS=Homo sapiens GN=B4GALT3 PE=1
SV=2
Length = 393
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Query: 87 FCPVVPPNLQGALKIH-KRYRSLNQIEKELAPLELEPGGSHRPKSCIALFRVAIIVPYRD 145
+CP P L G + + SL +I E P +EPGG +RP C R AIIVP+R
Sbjct: 76 YCPERSPLLVGPVSVSFSPVPSLAEI-VERNP-RVEPGGRYRPAGCEPRSRTAIIVPHRA 133
Query: 146 RKPHLHLLLYNLHPMLVRQQIDYTIFIIEQASN 178
R+ HL LLLY+LHP L RQQ+ Y I++I QA N
Sbjct: 134 REHHLRLLLYHLHPFLQRQQLAYGIYVIHQAGN 166
>sp|Q5EA87|B4GT3_BOVIN Beta-1,4-galactosyltransferase 3 OS=Bos taurus GN=B4GALT3 PE=2 SV=2
Length = 396
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Query: 87 FCPVVPPNLQGALKIH-KRYRSLNQIEKELAPLELEPGGSHRPKSCIALFRVAIIVPYRD 145
+CP P L G + + SL +I E P +EPGG +RP C R AIIVP+R
Sbjct: 79 YCPKRSPLLVGPISVSFSPVPSLAEI-VERNP-RVEPGGRYRPARCEPRSRTAIIVPHRA 136
Query: 146 RKPHLHLLLYNLHPMLVRQQIDYTIFIIEQASN 178
R+ HL LLLY+LHP L RQQ+ Y I++I QA N
Sbjct: 137 REHHLRLLLYHLHPFLQRQQLAYGIYVIHQAGN 169
>sp|Q91YY2|B4GT3_MOUSE Beta-1,4-galactosyltransferase 3 OS=Mus musculus GN=B4galt3 PE=1
SV=1
Length = 395
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 87 FCPVVPPNLQGALKIH-KRYRSLNQIEKELAPLELEPGGSHRPKSCIALFRVAIIVPYRD 145
+CP P L G + + SL +I E P +E GG +RP C R AIIVP+R
Sbjct: 78 YCPERSPFLVGPVSVSFSPVPSLAEI-VERNP-RVESGGRYRPAGCEPRSRTAIIVPHRA 135
Query: 146 RKPHLHLLLYNLHPMLVRQQIDYTIFIIEQASN 178
R+ HL LLLY+LHP L RQQ+ Y I++I QA N
Sbjct: 136 REHHLRLLLYHLHPFLQRQQLAYGIYVIHQAGN 168
>sp|Q6P768|B4GT3_RAT Beta-1,4-galactosyltransferase 3 OS=Rattus norvegicus GN=B4galt3
PE=2 SV=1
Length = 395
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 63/117 (53%), Gaps = 6/117 (5%)
Query: 66 MYFNLTVQRNMDNTSTTGIAQF---CPVVPPNLQGALKIH-KRYRSLNQIEKELAPLELE 121
+Y NL+ + +AQ CP P L G + + SL +I E P +E
Sbjct: 54 VYSNLSHLPGAPGAAGAPLAQVLPDCPERSPFLVGPVSVSFSPVPSLAEI-VERNP-RVE 111
Query: 122 PGGSHRPKSCIALFRVAIIVPYRDRKPHLHLLLYNLHPMLVRQQIDYTIFIIEQASN 178
GG +RP C R AIIVP+R R+ HL LLLY+LHP L RQQ+ Y I++I QA N
Sbjct: 112 SGGRYRPAGCEPRSRTAIIVPHRAREHHLRLLLYHLHPFLQRQQLAYGIYVIHQAGN 168
>sp|Q8R087|B4GT7_MOUSE Beta-1,4-galactosyltransferase 7 OS=Mus musculus GN=B4galt7 PE=2
SV=1
Length = 327
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 29/43 (67%)
Query: 136 RVAIIVPYRDRKPHLHLLLYNLHPMLVRQQIDYTIFIIEQASN 178
R+A++VP+R+R L + + ++H L R++I + I+++ Q +
Sbjct: 94 RLAVLVPFRERFEELLVFVPHMHRFLSRKRIQHHIYVLNQVDH 136
>sp|Q03874|VP7_ROTE2 Outer capsid glycoprotein VP7 OS=Rotavirus A (isolate
Equine/United States/FI-23/1981
G14-P4[12]-I2-Rx-Cx-Mx-A10-Nx-Tx-E2-Hx) PE=2 SV=1
Length = 326
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 10 MVSVLCQHIYKVLIIVVLALVLIEFTFSLLSETHNFYMHPFLTSINYTSPFMSSSIMYFN 69
M + C I LI +L+L+ + LL+ +F ++ FL I + SPF+ + N
Sbjct: 1 MYGIECTTILTFLI----SLILLNYILQLLTRIMDFIIYRFLFIIVFLSPFLKAQNYGIN 56
Query: 70 LTVQRNMD 77
L + +MD
Sbjct: 57 LPISGSMD 64
>sp|Q0I4E6|PRIB_HAES1 Primosomal replication protein n OS=Haemophilus somnus (strain
129Pt) GN=priB PE=3 SV=1
Length = 108
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 166 IDYTIFIIEQASNRKRAGSTRVRAWWKSSAQI 197
ID+ +F +E SN+K AG TR +AW K + QI
Sbjct: 31 IDHCLFYLEHRSNKKEAGFTR-QAWCKIAIQI 61
>sp|B0US44|PRIB_HAES2 Primosomal replication protein n OS=Haemophilus somnus (strain
2336) GN=priB PE=3 SV=1
Length = 108
Score = 32.0 bits (71), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 166 IDYTIFIIEQASNRKRAGSTRVRAWWKSSAQI 197
ID+ +F +E SN+K AG TR +AW K + QI
Sbjct: 31 IDHCLFYLEHRSNKKEAGFTR-QAWCKIAIQI 61
>sp|P49895|IOD1_HUMAN Type I iodothyronine deiodinase OS=Homo sapiens GN=DIO1 PE=2 SV=3
Length = 249
Score = 32.0 bits (71), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 39 LSETHNFYMHPFLTSINYTSPFMSSSIMYFNLTV--QRNMDNTSTTGIAQFCPVV 91
+ E +P + N+ F S+ +F L V QR D T G+A CPVV
Sbjct: 44 MGEKTGMTRNPHFSHDNWIPTFFSTQYFWFVLKVRWQRLEDTTELGGLAPNCPVV 98
>sp|Q9UBV7|B4GT7_HUMAN Beta-1,4-galactosyltransferase 7 OS=Homo sapiens GN=B4GALT7 PE=1
SV=1
Length = 327
Score = 30.4 bits (67), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 28/43 (65%)
Query: 136 RVAIIVPYRDRKPHLHLLLYNLHPMLVRQQIDYTIFIIEQASN 178
R+A++VP+R+R L + + ++ L R++I + I+++ Q +
Sbjct: 94 RLAVLVPFRERFEELLVFVPHMRRFLSRKKIRHHIYVLNQVDH 136
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.137 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,080,372
Number of Sequences: 539616
Number of extensions: 2751230
Number of successful extensions: 6909
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 6854
Number of HSP's gapped (non-prelim): 54
length of query: 222
length of database: 191,569,459
effective HSP length: 113
effective length of query: 109
effective length of database: 130,592,851
effective search space: 14234620759
effective search space used: 14234620759
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 59 (27.3 bits)